BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780762|ref|YP_003065175.1| recombination protein RecR
[Candidatus Liberibacter asiaticus str. psy62]
(201 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780762|ref|YP_003065175.1| recombination protein RecR [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040439|gb|ACT57235.1| recombination protein RecR [Candidatus Liberibacter asiaticus str.
psy62]
Length = 201
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC
Sbjct: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI
Sbjct: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG
Sbjct: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SELDYLDDGTIFEAIRSRTVL
Sbjct: 181 SELDYLDDGTIFEAIRSRTVL 201
>gi|315121977|ref|YP_004062466.1| recombination protein RecR [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495379|gb|ADR51978.1| recombination protein RecR [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 201
Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/201 (86%), Positives = 192/201 (95%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+KKITG EIENLIK+LARIPGFGPRSARRATLHLVKKKEQLLGPLA+ MA+IY KVCLC
Sbjct: 1 MKKKITGIEIENLIKMLARIPGFGPRSARRATLHLVKKKEQLLGPLADTMADIYKKVCLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGN+DT DPC ICID+QRD+SVI+V+EDVADLWALER+ AVNALYHVLGG+LSPLD I
Sbjct: 61 SICGNIDTIDPCIICIDEQRDSSVIVVIEDVADLWALERAGAVNALYHVLGGTLSPLDSI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDIGIQSLIERI+VKKIRELI AISATIEGQTTAHYIMDKLK +++KITRLAYGIP+G
Sbjct: 121 GPEDIGIQSLIERIKVKKIRELILAISATIEGQTTAHYIMDKLKNMNIKITRLAYGIPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SELDYLD+GT+FEAIRSRTVL
Sbjct: 181 SELDYLDEGTLFEAIRSRTVL 201
>gi|218514436|ref|ZP_03511276.1| recombination protein RecR [Rhizobium etli 8C-3]
Length = 201
Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/201 (68%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++ATIEGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATIEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|15963986|ref|NP_384339.1| recombination protein RecR [Sinorhizobium meliloti 1021]
gi|307306398|ref|ZP_07586142.1| recombination protein RecR [Sinorhizobium meliloti BL225C]
gi|307319285|ref|ZP_07598714.1| recombination protein RecR [Sinorhizobium meliloti AK83]
gi|20139570|sp|Q92SW9|RECR_RHIME RecName: Full=Recombination protein recR
gi|15073162|emb|CAC41670.1| Probable recombination protein [Sinorhizobium meliloti 1021]
gi|306895121|gb|EFN25878.1| recombination protein RecR [Sinorhizobium meliloti AK83]
gi|306902240|gb|EFN32837.1| recombination protein RecR [Sinorhizobium meliloti BL225C]
Length = 201
Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 172/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD +VIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SCCGNVDTIDPCTVCTDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ LI+R+ +RELI A++AT+EGQTTAHYI D+L+G++V+ITRLA+G+P+G
Sbjct: 121 GPEDLNIRGLIDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|190889792|ref|YP_001976334.1| DNA recombination protein [Rhizobium etli CIAT 652]
gi|229470340|sp|B3PXF0|RECR_RHIE6 RecName: Full=Recombination protein recR
gi|190695071|gb|ACE89156.1| DNA recombination protein [Rhizobium etli CIAT 652]
gi|327190228|gb|EGE57331.1| DNA recombination protein [Rhizobium etli CNPAF512]
Length = 201
Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|86355783|ref|YP_467675.1| recombination protein RecR [Rhizobium etli CFN 42]
gi|123513433|sp|Q2KDY8|RECR_RHIEC RecName: Full=Recombination protein recR
gi|86279885|gb|ABC88948.1| DNA recombination protein [Rhizobium etli CFN 42]
Length = 201
Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|218679359|ref|ZP_03527256.1| recombination protein RecR [Rhizobium etli CIAT 894]
Length = 201
Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|227824063|ref|YP_002828036.1| recombination protein RecR [Sinorhizobium fredii NGR234]
gi|254790779|sp|C3MC58|RECR_RHISN RecName: Full=Recombination protein recR
gi|227343065|gb|ACP27283.1| recombination protein, RecR [Sinorhizobium fredii NGR234]
Length = 201
Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD SVIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SCCGNVDTIDPCTVCTDERRDRSVIIVVEDVADLWALERAAALNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L++R+ +REL+ A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVDRVAKGGVRELVIAVNATVEGQTTAHYITDQLEGMEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTTI 201
>gi|209551645|ref|YP_002283562.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226726306|sp|B5ZW36|RECR_RHILW RecName: Full=Recombination protein recR
gi|209537401|gb|ACI57336.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 201
Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD S+IIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSIIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLNVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|116249898|ref|YP_765736.1| recombination protein RecR [Rhizobium leguminosarum bv. viciae
3841]
gi|123082100|sp|Q1MN32|RECR_RHIL3 RecName: Full=Recombination protein recR
gi|115254546|emb|CAK05620.1| putative recombination protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 201
Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|241207075|ref|YP_002978171.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860965|gb|ACS58632.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 201
Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ +RELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRVGEGGMRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|15887447|ref|NP_353128.1| recombination protein RecR [Agrobacterium tumefaciens str. C58]
gi|21759386|sp|Q8UJ45|RECR_AGRT5 RecName: Full=Recombination protein recR
gi|15154962|gb|AAK85913.1| Recombination protein [Agrobacterium tumefaciens str. C58]
Length = 201
Score = 291 bits (746), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKKEQLLGPL AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D +RD SVIIVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ LI+R+ IRELI A++AT+EGQ TAHYI D+L G+ +KITRLA+G+P+G
Sbjct: 121 GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDRLSGLGIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTTI 201
>gi|222084331|ref|YP_002542860.1| DNA recombination protein [Agrobacterium radiobacter K84]
gi|254790745|sp|B9JGT9|RECR_AGRRK RecName: Full=Recombination protein recR
gi|221721779|gb|ACM24935.1| DNA recombination protein [Agrobacterium radiobacter K84]
Length = 201
Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D RD SVIIVVEDVADLWALER+ A+NA YHVLGG LSPLD +
Sbjct: 61 SRCGNVDTVDPCTVCTDGHRDQSVIIVVEDVADLWALERAAAMNAAYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ +RE+I A++AT+EGQTTAHYI D+L G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIQRVGEGGVREIIIAVNATVEGQTTAHYITDQLAGLEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTAI 201
>gi|218671154|ref|ZP_03520825.1| recombination protein RecR [Rhizobium etli GR56]
Length = 211
Score = 290 bits (742), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 166/197 (84%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRS 197
ELDYLD+GT+ A+R
Sbjct: 181 GELDYLDEGTLAAALRQ 197
>gi|163757649|ref|ZP_02164738.1| DNA recombination protein [Hoeflea phototrophica DFL-43]
gi|162285151|gb|EDQ35433.1| DNA recombination protein [Hoeflea phototrophica DFL-43]
Length = 201
Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQK++TG EIE LI++LAR+PG GPRSARRA LHL+KKK+QL+GPLA AM ++KV +C
Sbjct: 1 MQKRVTGPEIERLIQLLARVPGLGPRSARRAALHLIKKKDQLMGPLALAMNEAHDKVQIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGN DT DPC +C D RD SVIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 STCGNADTVDPCTVCTDPARDQSVIIVVEDVADLWALERAAAMNAGYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I L++R+ +RE++ A++AT+EGQTTAHYI ++L G D+K+TRLA+G+P+G
Sbjct: 121 GPDDLSIAGLVDRVARGGVREILIAVNATVEGQTTAHYITEQLSGFDLKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR+RT
Sbjct: 181 GELDYLDEGTLAAAIRARTAF 201
>gi|325291537|ref|YP_004277401.1| recombination protein RecR [Agrobacterium sp. H13-3]
gi|325059390|gb|ADY63081.1| recombination protein RecR [Agrobacterium sp. H13-3]
Length = 201
Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 163/201 (81%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKKEQLLGPL AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D +RD SVIIVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ LI+R+ IRELI A++AT+EGQ TAHYI D L + +KITRLA+G+P+G
Sbjct: 121 GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDHLADLGIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTTI 201
>gi|90419788|ref|ZP_01227697.1| recombination protein recR [Aurantimonas manganoxydans SI85-9A1]
gi|90335829|gb|EAS49577.1| recombination protein recR [Aurantimonas manganoxydans SI85-9A1]
Length = 201
Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 166/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LA++PG GPRSARRA LHLVK++EQLL PL+ AM +KV +C
Sbjct: 1 MAKPIAGPEIERLIQLLAKLPGLGPRSARRAALHLVKRREQLLAPLSAAMGEALDKVTIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT DPC IC D RD S++IVVEDV+DLWALER+KA+NA YHVLGG LSPLD I
Sbjct: 61 SVCGNIDTFDPCTICTDGSRDQSIVIVVEDVSDLWALERAKALNAAYHVLGGVLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ ++ELI A++AT+EGQTTAHY+MD+L+G +V++TRLA+G+P+G
Sbjct: 121 GPDDLTIRQLVERVHKGGVKELILAVNATVEGQTTAHYLMDQLEGFEVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT L
Sbjct: 181 GELDYLDEGTLSAAMRSRTGL 201
>gi|13474593|ref|NP_106162.1| recombination protein RecR [Mesorhizobium loti MAFF303099]
gi|20139628|sp|Q98BM4|RECR_RHILO RecName: Full=Recombination protein recR
gi|14025347|dbj|BAB51948.1| recombination protein; RecR [Mesorhizobium loti MAFF303099]
Length = 201
Score = 284 bits (727), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 164/201 (81%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AM+ +KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMSEAADKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC IC D +RDA IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD I
Sbjct: 61 STCGNVDTADPCMICTDPRRDAGTIIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + I+SLI+R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G
Sbjct: 121 GPDQLNIRSLIDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTAF 201
>gi|150398621|ref|YP_001329088.1| recombination protein RecR [Sinorhizobium medicae WSM419]
gi|166221968|sp|A6UF23|RECR_SINMW RecName: Full=Recombination protein recR
gi|150030136|gb|ABR62253.1| recombination protein RecR [Sinorhizobium medicae WSM419]
Length = 201
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 129/189 (68%), Positives = 163/189 (86%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD +VIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SCCGNVDTIDPCTVCGDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I++L++R+ +RELI A++AT+EGQTTAHYI D+L+G++V+ITRLA+G+P+G
Sbjct: 121 GPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG 180
Query: 181 SELDYLDDG 189
ELDYLD+G
Sbjct: 181 GELDYLDEG 189
>gi|260462015|ref|ZP_05810260.1| recombination protein RecR [Mesorhizobium opportunistum WSM2075]
gi|259032262|gb|EEW33528.1| recombination protein RecR [Mesorhizobium opportunistum WSM2075]
Length = 201
Score = 283 bits (725), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AM +KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMGEAADKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D +RDA+ +IVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 STCGNVDTSDPCMICTDPRRDATTLIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + I+SLI+R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G
Sbjct: 121 GPDQLNIRSLIDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTAF 201
>gi|222147139|ref|YP_002548096.1| recombination protein RecR [Agrobacterium vitis S4]
gi|254790746|sp|B9JYJ6|RECR_AGRVS RecName: Full=Recombination protein recR
gi|221734129|gb|ACM35092.1| DNA recombination protein [Agrobacterium vitis S4]
Length = 201
Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 166/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KK+EQL+GPLA AM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKREQLMGPLALAMGEAHAKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD S+IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 SCCGNVDTIDPCTVCTDERRDQSMIIVVEDVSDLWALERAGAMNVAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ +RE+I A++AT+EGQTTAHYI D L G+ VK TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLIDRVAKGGVREIIIAVNATVEGQTTAHYITDHLAGLGVKTTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT++
Sbjct: 181 GELDYLDEGTLSAALRARTLI 201
>gi|319779803|ref|YP_004139279.1| recombination protein RecR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317165691|gb|ADV09229.1| recombination protein RecR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 201
Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AMA +KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMAEAADKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D +RDA IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD I
Sbjct: 61 STCGNVDTSDPCMICTDPRRDAGTIIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + ++SL++R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G
Sbjct: 121 GPEQLNMRSLVDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTAF 201
>gi|254502115|ref|ZP_05114266.1| recombination protein RecR [Labrenzia alexandrii DFL-11]
gi|222438186|gb|EEE44865.1| recombination protein RecR [Labrenzia alexandrii DFL-11]
Length = 202
Score = 276 bits (707), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 166/198 (83%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QK++ G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PL+EAM + +CS
Sbjct: 3 QKQVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLSEAMGIAVRDIGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+CG VDT+DPC IC D++RD SV++VVEDV+DLWALER+ AVNA YHVLGG+LSPLD +G
Sbjct: 63 VCGTVDTSDPCTICSDEKRDPSVLVVVEDVSDLWALERASAVNARYHVLGGTLSPLDGVG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P+D+ + SL++R +I+E+I AISAT+EGQTTAHYIMD+L +DV +T+LA+G+P+G
Sbjct: 123 PDDLNLASLVDRCGAPEIQEVILAISATVEGQTTAHYIMDQLGHLDVHVTKLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ +A+++RT
Sbjct: 183 ELDYLDEGTLAQALKART 200
>gi|153007368|ref|YP_001368583.1| recombination protein RecR [Ochrobactrum anthropi ATCC 49188]
gi|166221949|sp|A6WUV0|RECR_OCHA4 RecName: Full=Recombination protein recR
gi|151559256|gb|ABS12754.1| recombination protein RecR [Ochrobactrum anthropi ATCC 49188]
Length = 201
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 160/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPTTLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ +I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVSTGEIKEVILAVNATVEGQTTAHYITDQLSSFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|307942777|ref|ZP_07658122.1| recombination protein RecR [Roseibium sp. TrichSKD4]
gi|307773573|gb|EFO32789.1| recombination protein RecR [Roseibium sp. TrichSKD4]
Length = 202
Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 164/198 (82%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QK++ G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PLAEAM +K+ +CS
Sbjct: 3 QKRVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLAEAMGIAVDKIGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG VDT+DPCAIC D +RD +++VVEDVADLWALER+ A+NA YHVLGG+LSPLD IG
Sbjct: 63 KCGTVDTSDPCAICSDPRRDPKLLVVVEDVADLWALERAGAINACYHVLGGTLSPLDGIG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PED+ + SL+ R E ++ E+I AI+AT+EGQTTAHY+MD+L + V +TRLA+G+P+G
Sbjct: 123 PEDLNLASLVTRCEDPELEEVILAINATVEGQTTAHYVMDQLAHLSVNVTRLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ +A+R+RT
Sbjct: 183 ELDYLDEGTLAQALRART 200
>gi|328541813|ref|YP_004301922.1| Recombination protein RecR [polymorphum gilvum SL003B-26A1]
gi|326411565|gb|ADZ68628.1| Recombination protein RecR [Polymorphum gilvum SL003B-26A1]
Length = 202
Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 161/198 (81%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
+++ G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLAEAM +V +CS
Sbjct: 3 NRRVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKEQLLVPLAEAMGVAVERVGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG VDT+DPC IC D RD SV++VVEDV+DLWALER+ +NA YHVLGG+LSPLD IG
Sbjct: 63 TCGTVDTSDPCTICADPGRDDSVLVVVEDVSDLWALERAAVLNARYHVLGGTLSPLDGIG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PED+ I +L+ER+ IRE+I A++AT+EGQTTAHY+ +L G+DV +TRLA+G+P+G
Sbjct: 123 PEDLSIAALVERVRAGTIREVILAVNATVEGQTTAHYVTGQLAGLDVTVTRLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ +A+++RT
Sbjct: 183 ELDYLDEGTLAQALKART 200
>gi|239830867|ref|ZP_04679196.1| recombination protein RecR [Ochrobactrum intermedium LMG 3301]
gi|239823134|gb|EEQ94702.1| recombination protein RecR [Ochrobactrum intermedium LMG 3301]
Length = 232
Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 160/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 92 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ +IRE+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 152 GPDDLNIKGLVERVAAGEIREVILAVNATVEGQTTAHYITDQLSSFDVRVTRLAHGVPVG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 212 GELDYLDEGTLAAALRARTTL 232
>gi|319898352|ref|YP_004158445.1| recombination protein RecR [Bartonella clarridgeiae 73]
gi|319402316|emb|CBI75855.1| recombination protein RecR [Bartonella clarridgeiae 73]
Length = 201
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ NKV +C
Sbjct: 1 MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLEPLGSALQETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+ICID +RD S+IIVVED++DLWALER+K + YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTKDPCSICIDPRRDKSIIIVVEDISDLWALERAKILPTRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNITSLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+RT L
Sbjct: 181 GELDYLDDGTLAAALRARTNL 201
>gi|254718253|ref|ZP_05180064.1| recombination protein RecR [Brucella sp. 83/13]
gi|265983213|ref|ZP_06095948.1| recombination protein recR [Brucella sp. 83/13]
gi|306839995|ref|ZP_07472789.1| recombination protein RecR [Brucella sp. NF 2653]
gi|306842675|ref|ZP_07475319.1| recombination protein RecR [Brucella sp. BO2]
gi|264661805|gb|EEZ32066.1| recombination protein recR [Brucella sp. 83/13]
gi|306287184|gb|EFM58683.1| recombination protein RecR [Brucella sp. BO2]
gi|306404959|gb|EFM61244.1| recombination protein RecR [Brucella sp. NF 2653]
Length = 201
Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC DQ+RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDQRRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVAGGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|49473884|ref|YP_031926.1| recombination protein RecR [Bartonella quintana str. Toulouse]
gi|73621466|sp|Q6G0M8|RECR_BARQU RecName: Full=Recombination protein recR
gi|49239387|emb|CAF25721.1| Recombination protein recR [Bartonella quintana str. Toulouse]
Length = 201
Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 161/201 (80%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LARIPGFGPRSARRA L+L+KKKE LL PL A+ +KVC+C
Sbjct: 1 MSKHIAGPEIERLIQLLARIPGFGPRSARRAALYLIKKKETLLEPLGAAIQAAVDKVCIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDTTDPC+IC D +RD + IIVVEDVADLWALER++ + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTTDPCSICRDPRRDDTTIIVVEDVADLWALERARTLAARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SL++R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNITSLVQRVVQNPIMEIILAVNATVEGQTTAHYITDQLSNFSVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAALQARTNL 201
>gi|256045823|ref|ZP_05448699.1| recombination protein RecR [Brucella melitensis bv. 1 str. Rev.1]
gi|256112540|ref|ZP_05453461.1| recombination protein RecR [Brucella melitensis bv. 3 str. Ether]
gi|260563114|ref|ZP_05833600.1| recombination protein recR [Brucella melitensis bv. 1 str. 16M]
gi|265992236|ref|ZP_06104793.1| recombination protein recR [Brucella melitensis bv. 1 str. Rev.1]
gi|265993979|ref|ZP_06106536.1| recombination protein recR [Brucella melitensis bv. 3 str. Ether]
gi|20139475|sp|Q8YEG8|RECR_BRUME RecName: Full=Recombination protein recR
gi|260153130|gb|EEW88222.1| recombination protein recR [Brucella melitensis bv. 1 str. 16M]
gi|262764960|gb|EEZ10881.1| recombination protein recR [Brucella melitensis bv. 3 str. Ether]
gi|263003302|gb|EEZ15595.1| recombination protein recR [Brucella melitensis bv. 1 str. Rev.1]
Length = 201
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|17988193|ref|NP_540827.1| recombination protein RecR [Brucella melitensis bv. 1 str. 16M]
gi|17983955|gb|AAL53091.1| recombination protein recr [Brucella melitensis bv. 1 str. 16M]
Length = 224
Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 24 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 83
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 84 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 143
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 144 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 203
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 204 GELDYLDEGTLAAALRARTTL 224
>gi|110636415|ref|YP_676623.1| recombination protein RecR [Mesorhizobium sp. BNC1]
gi|123057246|sp|Q11AW7|RECR_MESSB RecName: Full=Recombination protein recR
gi|110287399|gb|ABG65458.1| DNA replication and repair protein RecR [Chelativorans sp. BNC1]
Length = 201
Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 162/201 (80%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQL PL AMA KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLFSPLTTAMAEALAKVRVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT+DPC IC D +R+++ +IVVEDV+DLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 SVCGNVDTSDPCTICTDPRRESATLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ RI + E+I A++AT+EGQ TAHYI D+L G++V++T+LA+G+P+G
Sbjct: 121 GPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A++SRT
Sbjct: 181 GELDYLDEGTLAAALKSRTAF 201
>gi|23500947|ref|NP_697074.1| recombination protein RecR [Brucella suis 1330]
gi|62289020|ref|YP_220813.1| recombination protein RecR [Brucella abortus bv. 1 str. 9-941]
gi|82698958|ref|YP_413532.1| recombination protein RecR [Brucella melitensis biovar Abortus
2308]
gi|161618022|ref|YP_001591909.1| recombination protein RecR [Brucella canis ATCC 23365]
gi|163842308|ref|YP_001626712.1| recombination protein RecR [Brucella suis ATCC 23445]
gi|254690346|ref|ZP_05153600.1| recombination protein RecR [Brucella abortus bv. 6 str. 870]
gi|254694835|ref|ZP_05156663.1| recombination protein RecR [Brucella abortus bv. 3 str. Tulya]
gi|254696464|ref|ZP_05158292.1| recombination protein RecR [Brucella abortus bv. 2 str. 86/8/59]
gi|254700847|ref|ZP_05162675.1| recombination protein RecR [Brucella suis bv. 5 str. 513]
gi|254705214|ref|ZP_05167042.1| recombination protein RecR [Brucella suis bv. 3 str. 686]
gi|254707266|ref|ZP_05169094.1| recombination protein RecR [Brucella pinnipedialis M163/99/10]
gi|254709192|ref|ZP_05171003.1| recombination protein RecR [Brucella pinnipedialis B2/94]
gi|254713383|ref|ZP_05175194.1| recombination protein RecR [Brucella ceti M644/93/1]
gi|254716259|ref|ZP_05178070.1| recombination protein RecR [Brucella ceti M13/05/1]
gi|254731376|ref|ZP_05189954.1| recombination protein RecR [Brucella abortus bv. 4 str. 292]
gi|256030716|ref|ZP_05444330.1| recombination protein RecR [Brucella pinnipedialis M292/94/1]
gi|256060175|ref|ZP_05450355.1| recombination protein RecR [Brucella neotomae 5K33]
gi|256158722|ref|ZP_05456597.1| recombination protein RecR [Brucella ceti M490/95/1]
gi|256254120|ref|ZP_05459656.1| recombination protein RecR [Brucella ceti B1/94]
gi|256258600|ref|ZP_05464136.1| recombination protein RecR [Brucella abortus bv. 9 str. C68]
gi|256368499|ref|YP_003106005.1| recombination protein RecR [Brucella microti CCM 4915]
gi|260169619|ref|ZP_05756430.1| recombination protein RecR [Brucella sp. F5/99]
gi|260546314|ref|ZP_05822054.1| recombination protein recR [Brucella abortus NCTC 8038]
gi|260567319|ref|ZP_05837789.1| recombination protein recR [Brucella suis bv. 4 str. 40]
gi|260755888|ref|ZP_05868236.1| recombination protein recR [Brucella abortus bv. 6 str. 870]
gi|260759112|ref|ZP_05871460.1| recombination protein recR [Brucella abortus bv. 4 str. 292]
gi|260760837|ref|ZP_05873180.1| recombination protein recR [Brucella abortus bv. 2 str. 86/8/59]
gi|260884912|ref|ZP_05896526.1| recombination protein recR [Brucella abortus bv. 9 str. C68]
gi|261215163|ref|ZP_05929444.1| recombination protein recR [Brucella abortus bv. 3 str. Tulya]
gi|261218035|ref|ZP_05932316.1| recombination protein recR [Brucella ceti M13/05/1]
gi|261221262|ref|ZP_05935543.1| recombination protein recR [Brucella ceti B1/94]
gi|261314749|ref|ZP_05953946.1| recombination protein recR [Brucella pinnipedialis M163/99/10]
gi|261316692|ref|ZP_05955889.1| recombination protein recR [Brucella pinnipedialis B2/94]
gi|261321115|ref|ZP_05960312.1| recombination protein recR [Brucella ceti M644/93/1]
gi|261324152|ref|ZP_05963349.1| recombination protein recR [Brucella neotomae 5K33]
gi|261751357|ref|ZP_05995066.1| recombination protein recR [Brucella suis bv. 5 str. 513]
gi|261755922|ref|ZP_05999631.1| recombination protein recR [Brucella suis bv. 3 str. 686]
gi|261759148|ref|ZP_06002857.1| recombination protein recR [Brucella sp. F5/99]
gi|265987762|ref|ZP_06100319.1| recombination protein recR [Brucella pinnipedialis M292/94/1]
gi|265997223|ref|ZP_06109780.1| recombination protein recR [Brucella ceti M490/95/1]
gi|294851441|ref|ZP_06792114.1| recombination protein RecR [Brucella sp. NVSL 07-0026]
gi|38258603|sp|Q8G3B7|RECR_BRUSU RecName: Full=Recombination protein recR
gi|73621473|sp|Q57FY2|RECR_BRUAB RecName: Full=Recombination protein recR
gi|123546965|sp|Q2YPN0|RECR_BRUA2 RecName: Full=Recombination protein recR
gi|189029354|sp|A9M6N7|RECR_BRUC2 RecName: Full=Recombination protein recR
gi|189029355|sp|B0CI52|RECR_BRUSI RecName: Full=Recombination protein recR
gi|23346803|gb|AAN28989.1| recombination protein RecR [Brucella suis 1330]
gi|62195152|gb|AAX73452.1| RecR, recombination protein [Brucella abortus bv. 1 str. 9-941]
gi|82615059|emb|CAJ09985.1| RecR protein:Toprim sub-domain:TOPRIM [Brucella melitensis biovar
Abortus 2308]
gi|161334833|gb|ABX61138.1| recombination protein RecR [Brucella canis ATCC 23365]
gi|163673031|gb|ABY37142.1| recombination protein RecR [Brucella suis ATCC 23445]
gi|255998657|gb|ACU47056.1| recombination protein RecR [Brucella microti CCM 4915]
gi|260096421|gb|EEW80297.1| recombination protein recR [Brucella abortus NCTC 8038]
gi|260156837|gb|EEW91917.1| recombination protein recR [Brucella suis bv. 4 str. 40]
gi|260669430|gb|EEX56370.1| recombination protein recR [Brucella abortus bv. 4 str. 292]
gi|260671269|gb|EEX58090.1| recombination protein recR [Brucella abortus bv. 2 str. 86/8/59]
gi|260675996|gb|EEX62817.1| recombination protein recR [Brucella abortus bv. 6 str. 870]
gi|260874440|gb|EEX81509.1| recombination protein recR [Brucella abortus bv. 9 str. C68]
gi|260916770|gb|EEX83631.1| recombination protein recR [Brucella abortus bv. 3 str. Tulya]
gi|260919846|gb|EEX86499.1| recombination protein recR [Brucella ceti B1/94]
gi|260923124|gb|EEX89692.1| recombination protein recR [Brucella ceti M13/05/1]
gi|261293805|gb|EEX97301.1| recombination protein recR [Brucella ceti M644/93/1]
gi|261295915|gb|EEX99411.1| recombination protein recR [Brucella pinnipedialis B2/94]
gi|261300132|gb|EEY03629.1| recombination protein recR [Brucella neotomae 5K33]
gi|261303775|gb|EEY07272.1| recombination protein recR [Brucella pinnipedialis M163/99/10]
gi|261739132|gb|EEY27128.1| recombination protein recR [Brucella sp. F5/99]
gi|261741110|gb|EEY29036.1| recombination protein recR [Brucella suis bv. 5 str. 513]
gi|261745675|gb|EEY33601.1| recombination protein recR [Brucella suis bv. 3 str. 686]
gi|262551691|gb|EEZ07681.1| recombination protein recR [Brucella ceti M490/95/1]
gi|264659959|gb|EEZ30220.1| recombination protein recR [Brucella pinnipedialis M292/94/1]
gi|294820030|gb|EFG37029.1| recombination protein RecR [Brucella sp. NVSL 07-0026]
Length = 201
Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|118590528|ref|ZP_01547930.1| recombination protein RecR [Stappia aggregata IAM 12614]
gi|118436991|gb|EAV43630.1| recombination protein RecR [Stappia aggregata IAM 12614]
Length = 202
Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 162/198 (81%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QK + G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PLAEAM ++ +CS
Sbjct: 3 QKSVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLAEAMGIAVREIGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG VDT+DPC IC D +RD SV++VVEDVADLWALER+ AVNA YHVLGG+LSPLD IG
Sbjct: 63 TCGTVDTSDPCTICSDPKRDQSVLVVVEDVADLWALERAGAVNARYHVLGGNLSPLDGIG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P+D+ + SLI+R + E+I AI+AT+EGQTTAHYIMD+L ++V +TRLA+G+P+G
Sbjct: 123 PDDLNLASLIDRCGSEGFSEVILAINATVEGQTTAHYIMDQLSHLEVNVTRLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ +A+R+RT
Sbjct: 183 ELDYLDEGTLAQALRART 200
>gi|189023296|ref|YP_001934064.1| recombination protein RecR [Brucella abortus S19]
gi|225626581|ref|ZP_03784620.1| recombination protein RecR [Brucella ceti str. Cudo]
gi|237814507|ref|ZP_04593505.1| recombination protein RecR [Brucella abortus str. 2308 A]
gi|297247439|ref|ZP_06931157.1| recombination protein RecR [Brucella abortus bv. 5 str. B3196]
gi|189018868|gb|ACD71590.1| recombination protein RecR [Brucella abortus S19]
gi|225618238|gb|EEH15281.1| recombination protein RecR [Brucella ceti str. Cudo]
gi|237789344|gb|EEP63554.1| recombination protein RecR [Brucella abortus str. 2308 A]
gi|297174608|gb|EFH33955.1| recombination protein RecR [Brucella abortus bv. 5 str. B3196]
Length = 232
Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 92 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 152 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 212 GELDYLDEGTLAAALRARTTL 232
>gi|306843632|ref|ZP_07476233.1| recombination protein RecR [Brucella sp. BO1]
gi|306276323|gb|EFM58023.1| recombination protein RecR [Brucella sp. BO1]
Length = 201
Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVAGGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|225851575|ref|YP_002731808.1| recombination protein RecR [Brucella melitensis ATCC 23457]
gi|256264913|ref|ZP_05467445.1| recombination protein recR [Brucella melitensis bv. 2 str. 63/9]
gi|254790756|sp|C0RG96|RECR_BRUMB RecName: Full=Recombination protein recR
gi|225639940|gb|ACN99853.1| recombination protein RecR [Brucella melitensis ATCC 23457]
gi|263095398|gb|EEZ18999.1| recombination protein recR [Brucella melitensis bv. 2 str. 63/9]
gi|326408044|gb|ADZ65109.1| recombination protein RecR [Brucella melitensis M28]
gi|326537761|gb|ADZ85976.1| recombination protein RecR [Brucella melitensis M5-90]
Length = 201
Score = 273 bits (699), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L D+++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDMRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|319405114|emb|CBI78720.1| recombination protein RecR [Bartonella sp. AR 15-3]
Length = 201
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 158/199 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI+ LARIPG GPRSARRA L+L+KKKE LL PL AM NKV +C
Sbjct: 1 MSKHIAGPEIERLIQFLARIPGLGPRSARRAALYLIKKKETLLEPLGSAMLETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDTTDPC+IC D +RD S+IIVVED++DLWALER+K ++A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTTDPCSICTDPRRDESIIIVVEDISDLWALERAKFLSARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNIISLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLDDGT+ A+++RT
Sbjct: 181 GELDYLDDGTLAAALQART 199
>gi|182677253|ref|YP_001831399.1| recombination protein RecR [Beijerinckia indica subsp. indica ATCC
9039]
gi|254790751|sp|B2ICM1|RECR_BEII9 RecName: Full=Recombination protein recR
gi|182633136|gb|ACB93910.1| recombination protein RecR [Beijerinckia indica subsp. indica ATCC
9039]
Length = 201
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 157/199 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M I G EIE LI +LAR+PG GPRSARRA LHL++K+ +LLGPLAEA+ YN + C
Sbjct: 1 MTAPIAGPEIERLIHLLARLPGLGPRSARRAALHLIRKRTELLGPLAEALQQAYNHLIPC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+DT DPC IC D +RD ++++VVE VADLWALER+ A+ A YHVLGG+LSPLD +
Sbjct: 61 QICGNIDTRDPCTICADAKRDPTLLVVVETVADLWALERAAALPARYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ +QSL ER+ +IRE+I A++AT++GQTTAHYI D L VKITRLA+G+P+G
Sbjct: 121 GPKDLNLQSLTERVAQGEIREVILAVNATVDGQTTAHYITDSLAAFPVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRT 199
>gi|49475042|ref|YP_033083.1| recombination protein RecR [Bartonella henselae str. Houston-1]
gi|73621465|sp|Q6G4V2|RECR_BARHE RecName: Full=Recombination protein recR
gi|49237847|emb|CAF27042.1| Recombination protein recR [Bartonella henselae str. Houston-1]
Length = 201
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ KVC+C
Sbjct: 1 MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLEPLGAAIQAAVQKVCIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTIDPCSICTDPRRDDATIIVVEDIADLWALERAKTLAARYHVLGGKLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I LI+R+ I E+I A++AT+EGQTTAHYI D+L VK+TRLA+G+P+G
Sbjct: 121 GPDELNIAPLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFSVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAALQARTNL 201
>gi|319403644|emb|CBI77229.1| recombination protein RecR [Bartonella rochalimae ATCC BAA-1498]
Length = 201
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 159/199 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE+LI++LARIPG GPRSARRA L+L+KKKE LL PL A+ NKV +C
Sbjct: 1 MSKHIAGPEIEHLIQLLARIPGLGPRSARRAALYLIKKKETLLEPLGSAIQETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDTT+PC+IC D RD S+IIVVED++DLWALER+K ++A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTTNPCSICTDPHRDESIIIVVEDISDLWALERAKFLSARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNIASLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLDDGT+ A+++RT
Sbjct: 181 GELDYLDDGTLAAALQART 199
>gi|172048304|sp|A5VMY2|RECR_BRUO2 RecName: Full=Recombination protein recR
Length = 201
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++R + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRAPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|148560476|ref|YP_001258079.1| recombination protein RecR [Brucella ovis ATCC 25840]
gi|148371733|gb|ABQ61712.1| recombination protein RecR [Brucella ovis ATCC 25840]
Length = 232
Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++R + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 92 SCCGNVDTSDPCTICTDERRAPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 152 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 212 GELDYLDEGTLAAALRARTTL 232
>gi|319406560|emb|CBI80202.1| recombination protein RecR [Bartonella sp. 1-1C]
Length = 201
Score = 270 bits (691), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 158/199 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE+LI++LARIPG GPRSARRA L+L+KKKE LL PL A+ NKV +C
Sbjct: 1 MSKHIAGPEIEHLIQLLARIPGLGPRSARRAALYLIKKKETLLEPLGSALQETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGNVDTTDPC+IC D RD S+IIVVED++DLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SICGNVDTTDPCSICTDPHRDESIIIVVEDISDLWALERAKFLLARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI ++L +KITRLA+G+P+G
Sbjct: 121 GPDELNIASLINRVTNNSITEIILAVNATVEGQTTAHYITNQLSQSSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLDDGT+ A+++RT
Sbjct: 181 GELDYLDDGTLAAALQART 199
>gi|163867526|ref|YP_001608725.1| recombination protein RecR [Bartonella tribocorum CIP 105476]
gi|189029353|sp|A9IMX8|RECR_BART1 RecName: Full=Recombination protein recR
gi|161017172|emb|CAK00730.1| recombination protein RecR [Bartonella tribocorum CIP 105476]
Length = 201
Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI+ILAR+PG GPRSARRA LHL+KKKE LL PL A+ KV +C
Sbjct: 1 MSKYIAGPEIERLIQILARLPGLGPRSARRAALHLIKKKETLLEPLGAAVQAAIEKVGIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTIDPCSICTDSRRDDTTIIVVEDIADLWALERAKTLAARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I +LI+R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNIATLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFPVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAAVQARTNL 201
>gi|319408025|emb|CBI81679.1| recombination protein RecR [Bartonella schoenbuchensis R1]
Length = 201
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 156/201 (77%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ NKV +C
Sbjct: 1 MSQHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKEILLEPLGAAIQEAVNKVSIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGNVDTTDPC IC D +RD + IIVVED++DLWALER+ + A YHVLGG LSPLD I
Sbjct: 61 SICGNVDTTDPCLICTDPRRDNTTIIVVEDISDLWALERAGILPARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNITSLINRVINDSITEVILAVNATVEGQTTAHYITDQLSNFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+RT L
Sbjct: 181 GELDYLDDGTLAAALRARTNL 201
>gi|240849895|ref|YP_002971284.1| recombination protein RecR [Bartonella grahamii as4aup]
gi|240267018|gb|ACS50606.1| recombination protein RecR [Bartonella grahamii as4aup]
Length = 201
Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI+IL+RIPG GPRSARRA LHL+KKKE LL PL A+ KV +C
Sbjct: 1 MSKYIAGPEIERLIQILSRIPGLGPRSARRAALHLIKKKETLLEPLGAAIQAAIEKVGIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTIDPCSICTDLRRDDTTIIVVEDIADLWALERAKTLAARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I +LI+R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNIATLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFSVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAAVQARTNL 201
>gi|121601748|ref|YP_989489.1| recombination protein RecR [Bartonella bacilliformis KC583]
gi|166221924|sp|A1UU36|RECR_BARBK RecName: Full=Recombination protein recR
gi|120613925|gb|ABM44526.1| recombination protein RecR [Bartonella bacilliformis KC583]
Length = 201
Score = 268 bits (684), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 156/199 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K ITG EIE LI +LARIPG GPRSARRA LHL+KKKE LL PL A+ + +KV +C
Sbjct: 1 MAKHITGPEIERLIHLLARIPGLGPRSARRAALHLIKKKEALLEPLGTAIRDAVDKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DTTDPC+IC D +RD IIVVED++DLWALER+ + A YHVLGG LSPLD I
Sbjct: 61 SVCGNIDTTDPCSICTDPRRDNGTIIVVEDISDLWALERAGTLLARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++ATIEGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNITSLINRVIKDPITEIILAVNATIEGQTTAHYITDQLSNFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLDDGT+ A+R+RT
Sbjct: 181 GELDYLDDGTLAAALRART 199
>gi|254470668|ref|ZP_05084071.1| recombination protein RecR [Pseudovibrio sp. JE062]
gi|211959810|gb|EEA95007.1| recombination protein RecR [Pseudovibrio sp. JE062]
Length = 203
Score = 267 bits (682), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 162/198 (81%), Gaps = 1/198 (0%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+++ G EIE LI++LA++PG GPRSARRA LHLV+KK+QLL PLAEAM ++V +CS
Sbjct: 4 RRVAGPEIERLIQLLAKLPGLGPRSARRAALHLVQKKDQLLIPLAEAMGVAVDQVGICSE 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CG VDT+DPC IC D +RD S I+VVEDV+DLWALER+ AV+A YHVLGG+LSPLD IGP
Sbjct: 64 CGTVDTSDPCTICSDPRRDGSTIVVVEDVSDLWALERASAVSAHYHVLGGTLSPLDGIGP 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGS 181
+D+ I LIER+E + E+I A++AT+EGQTTAH+I D+L +VK+TRLA+G+P+G
Sbjct: 124 DDLNISKLIERVESGGVNEVILAVNATVEGQTTAHFITDQLARFENVKVTRLAHGVPVGG 183
Query: 182 ELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ +A+R+RT
Sbjct: 184 ELDYLDEGTLAQALRART 201
>gi|323136738|ref|ZP_08071819.1| recombination protein RecR [Methylocystis sp. ATCC 49242]
gi|322398055|gb|EFY00576.1| recombination protein RecR [Methylocystis sp. ATCC 49242]
Length = 201
Score = 263 bits (673), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 158/199 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +++ G EIE L+++LAR+PG GPRSARRA LHL++K+E+LL PL++AM ++ C
Sbjct: 1 MAERVAGPEIERLVQLLARLPGLGPRSARRAALHLIRKREELLAPLSDAMRVAQERIVSC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT+DPC IC D +RD S+++VVE VADLWALER+ +NA YHVLGG LSPLD +
Sbjct: 61 SVCGNIDTSDPCTICRDARRDPSILVVVETVADLWALERAGLLNARYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I SLIER+ +IRE++ A++AT++GQTTAHYI D L VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIASLIERVRAGEIREIVLAVNATVDGQTTAHYIADLLSPFGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ A+ RT
Sbjct: 181 GELDYLDEGTLAAALERRT 199
>gi|114704407|ref|ZP_01437315.1| recombination protein RecR [Fulvimarina pelagi HTCC2506]
gi|114539192|gb|EAU42312.1| recombination protein RecR [Fulvimarina pelagi HTCC2506]
Length = 201
Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 166/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LA++PG GPRSARRA LHLVKK+E +L PL AMA+ KV C
Sbjct: 1 MAKSIAGPEIERLIQLLAKLPGLGPRSARRAALHLVKKREPILRPLTAAMADALEKVGEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT+DPC IC D RD SV++VVEDV+DLWALER+KA+NA YHVLGG LSPL+ I
Sbjct: 61 SVCGNIDTSDPCTICRDPARDQSVVVVVEDVSDLWALERAKALNAAYHVLGGVLSPLEGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ L+ER+ +++EL+ A++AT+EGQTTAHY+MD+L+G+DV+ TRLA+G+P+G
Sbjct: 121 GPEDLTIRQLVERVSKGEVKELVIAVNATVEGQTTAHYLMDQLEGLDVRATRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT L
Sbjct: 181 GELDYLDEGTLSAAMRSRTAL 201
>gi|298294316|ref|YP_003696255.1| recombination protein RecR [Starkeya novella DSM 506]
gi|296930827|gb|ADH91636.1| recombination protein RecR [Starkeya novella DSM 506]
Length = 201
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA LHL+KK+EQL+ PLA A + K+ C
Sbjct: 1 MPRAVAGPEIERLIQLLARVPGLGPRSARRAALHLIKKREQLMSPLASAFEEVLGKISTC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+D DPC+IC+D+ RD ++++VV DV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 RVCGNIDVRDPCSICVDETRDPTLLVVVADVSDLWALERAGAINARYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ +++LIER ++E++ A+ AT++GQTTAHY+ + L+ V +TRLA+G+P+G
Sbjct: 121 GPEDLNLKTLIERAHDGTVKEVLLALGATVDGQTTAHYVTEMLRDSGVAVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AI++RT L
Sbjct: 181 GELDYLDEGTLAAAIKARTSL 201
>gi|304393794|ref|ZP_07375719.1| recombination protein RecR [Ahrensia sp. R2A130]
gi|303293993|gb|EFL88368.1| recombination protein RecR [Ahrensia sp. R2A130]
Length = 209
Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 118/195 (60%), Positives = 158/195 (81%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+G+EI+ LI++LAR+PG GPRSARRA LHL+K+K+ L+ PLA A+ + KV CS CGN
Sbjct: 13 SGQEIDRLIQLLARLPGLGPRSARRAALHLIKRKDALMSPLASAINDAVEKVGECSTCGN 72
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAV-NALYHVLGGSLSPLDRIGPED 124
+DT++PCA+C D +RD S IIVVEDV+DLWALER+ + NA YHVLGG LSPLD IGPED
Sbjct: 73 IDTSNPCALCRDPRRDGSTIIVVEDVSDLWALERAAVMNNAKYHVLGGVLSPLDGIGPED 132
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ER+ + EL+ A++AT+EGQTTAHYI D+L+G++V I+RLA+G+P+G ELD
Sbjct: 133 LSISQLVERVSSGAVSELVIAVNATVEGQTTAHYITDQLRGMEVNISRLAHGVPVGGELD 192
Query: 185 YLDDGTIFEAIRSRT 199
YLD+GT+ A+R+RT
Sbjct: 193 YLDEGTLSAAMRART 207
>gi|217976470|ref|YP_002360617.1| recombination protein RecR [Methylocella silvestris BL2]
gi|254790777|sp|B8EP17|RECR_METSB RecName: Full=Recombination protein recR
gi|217501846|gb|ACK49255.1| recombination protein RecR [Methylocella silvestris BL2]
Length = 201
Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 155/199 (77%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I G EIE LI++LAR+PG GPRSARRA LHL++K+E+L GPLAEAM + + C
Sbjct: 1 MGDRICGPEIERLIQLLARLPGLGPRSARRAALHLIRKREELFGPLAEAMRVARDTIVSC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVD+ DPC IC D++RD S +IVVE V DLWALERS AV YHVLGG LSPLD +
Sbjct: 61 SVCGNVDSCDPCTICRDERRDPSTLIVVETVGDLWALERSGAVKGRYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I SLIER+ I E++ A++AT++GQTTAHY+ D + ++V+ TRLA+G+P+G
Sbjct: 121 GPKDLNISSLIERVAAGGISEVVLAVNATVDGQTTAHYVTDLISHLNVRTTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ A+R+RT
Sbjct: 181 GELDYLDEGTLAAALRART 199
>gi|158421771|ref|YP_001523063.1| recombination protein RecR [Azorhizobium caulinodans ORS 571]
gi|172048018|sp|A8IGX4|RECR_AZOC5 RecName: Full=Recombination protein recR
gi|158328660|dbj|BAF86145.1| recombination protein [Azorhizobium caulinodans ORS 571]
Length = 201
Score = 257 bits (656), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 153/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRATLHL+KK+E L+ PL A+ ++ K+ C
Sbjct: 1 MSRAVAGPEIERLIQLLGRLPGLGPRSARRATLHLIKKRETLMAPLGLALQDVLGKIVEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGNVD DPC +C D RD+SV++VV +VADLWALER+ A+NA YHVLGG LSPLD +
Sbjct: 61 QVCGNVDVRDPCTVCTDIHRDSSVLVVVAEVADLWALERANAINAKYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ + L+ER+ + E+I A+ AT++ QTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPDDLNLTKLVERVGAGGVNEVILALGATVDAQTTAHYVTDLLRETGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELD+LD+GT+ AIR+RT L
Sbjct: 181 GELDHLDEGTLSAAIRARTAL 201
>gi|170749550|ref|YP_001755810.1| recombination protein RecR [Methylobacterium radiotolerans JCM
2831]
gi|238688893|sp|B1M6N6|RECR_METRJ RecName: Full=Recombination protein recR
gi|170656072|gb|ACB25127.1| recombination protein RecR [Methylobacterium radiotolerans JCM
2831]
Length = 201
Score = 257 bits (656), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA L L+KK++ LLGPLA+AM +++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKRDTLLGPLADAMRVAADRIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CGNVDT+DPC IC D +RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 TSCGNVDTSDPCTICRDAERDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + + SL+ER+ ++ E+I A++AT++GQTTAHY+ + ++ DVK+TRLA+G+P+G
Sbjct: 121 RPEHLNLASLVERVARPEVTEVILALNATVDGQTTAHYVTESIRHCDVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLSAAIRSRTAF 201
>gi|220924616|ref|YP_002499918.1| recombination protein RecR [Methylobacterium nodulans ORS 2060]
gi|254790776|sp|B8IFQ5|RECR_METNO RecName: Full=Recombination protein recR
gi|219949223|gb|ACL59615.1| recombination protein RecR [Methylobacterium nodulans ORS 2060]
Length = 201
Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 153/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA L L+KK+E LL PLAEAM ++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKREALLAPLAEAMRVACERIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D RD S+++VVEDV+DLWALERS AV A YHVLGG LS LD I
Sbjct: 61 HECGNVDTSDPCTICRDHSRDPSILVVVEDVSDLWALERSGAVTARYHVLGGVLSALDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE++ + L+ER V ++RE+I A++AT++GQTTAHYI + L + VK+T+LA+G+P+G
Sbjct: 121 RPENLNLSRLVERASVPEMREVILALNATVDGQTTAHYITELLAHLPVKVTKLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR RT
Sbjct: 181 GELDYLDEGTLSAAIRQRTAF 201
>gi|148258529|ref|YP_001243114.1| recombination protein RecR [Bradyrhizobium sp. BTAi1]
gi|172047315|sp|A5ESR4|RECR_BRASB RecName: Full=Recombination protein recR
gi|146410702|gb|ABQ39208.1| DNA replication and repair protein RecR [Bradyrhizobium sp. BTAi1]
Length = 199
Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 153/197 (77%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA AM ++ +C CG
Sbjct: 3 VAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMVPLASAMQVAIERIQVCKTCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT PC +C D +RD ++I+VV DVADLWALER+KA N YHVLGG+LSPLD +GP+D
Sbjct: 63 NIDTQSPCTVCTDPRRDPAMIVVVADVADLWALERAKASNGRYHVLGGTLSPLDGVGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G ELD
Sbjct: 123 LTIDALVQRAHAPEVSEIILALNATVDGQTTAHYITDLLQEANVKVTRLAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R RT+
Sbjct: 183 YLDEGTLSAAMRQRTLF 199
>gi|296447824|ref|ZP_06889737.1| recombination protein RecR [Methylosinus trichosporium OB3b]
gi|296254683|gb|EFH01797.1| recombination protein RecR [Methylosinus trichosporium OB3b]
Length = 201
Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 156/199 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++I G EIE L+++LAR+PG GPRSARRA LHL++K+++LLGPL EAM + ++ C
Sbjct: 1 MAERIAGPEIERLVQLLARLPGLGPRSARRAVLHLIRKRDELLGPLGEAMRVAHERILAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT+DPCAIC D +RDA ++++VE VADLWALER+ + A YHVLGG LSPLD +
Sbjct: 61 SVCGNIDTSDPCAICRDPRRDAGLLVIVETVADLWALERAGLLAARYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + SL++RI +RE I A++AT++GQTTAHY+ D L + VK TRLA+G+P+G
Sbjct: 121 GPSELNMASLVQRIGEGGVREAIIAVNATVDGQTTAHYLADLLAPLGVKTTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ A+ RT
Sbjct: 181 GELDYLDEGTLAAALDRRT 199
>gi|75674565|ref|YP_316986.1| recombination protein RecR [Nitrobacter winogradskyi Nb-255]
gi|123614211|sp|Q3SVQ7|RECR_NITWN RecName: Full=Recombination protein recR
gi|74419435|gb|ABA03634.1| RecR protein [Nitrobacter winogradskyi Nb-255]
Length = 201
Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +TG EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C
Sbjct: 1 MPTAVTGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIDRIRVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT PC IC D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 ETCGNIDTRSPCTICTDARRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVARAHDPRVAEIVLALNATVDGQTTAHYITDLLGEANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|146337880|ref|YP_001202928.1| recombination protein RecR [Bradyrhizobium sp. ORS278]
gi|172046977|sp|A4YLB4|RECR_BRASO RecName: Full=Recombination protein recR
gi|146190686|emb|CAL74690.1| Recombination protein recR [Bradyrhizobium sp. ORS278]
Length = 199
Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 154/197 (78%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C CG
Sbjct: 3 VAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMVPLASALQVAIDRIQVCKTCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT PC +C D +RD ++I+VV DVADLWALER+KA N YHVLGG+LSPLD +GP+D
Sbjct: 63 NIDTQSPCTVCTDPRRDPAMIVVVADVADLWALERAKASNGRYHVLGGTLSPLDGVGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G ELD
Sbjct: 123 LTIDALVQRAHAPEVSEIILALNATVDGQTTAHYITDLLQEANVKVTRLAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R RT+
Sbjct: 183 YLDEGTLSAAMRQRTLF 199
>gi|85717150|ref|ZP_01048109.1| recombination protein RecR [Nitrobacter sp. Nb-311A]
gi|85696041|gb|EAQ33940.1| recombination protein RecR [Nitrobacter sp. Nb-311A]
Length = 201
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +TG EI+ LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C
Sbjct: 1 MPTAVTGPEIDRLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIDRILVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 ETCGNIDTRSPCTVCTDVRRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVSRAHDSRVTEIVLALNATVDGQTTAHYITDLLGDANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|170742369|ref|YP_001771024.1| recombination protein RecR [Methylobacterium sp. 4-46]
gi|238688006|sp|B0UP43|RECR_METS4 RecName: Full=Recombination protein recR
gi|168196643|gb|ACA18590.1| recombination protein RecR [Methylobacterium sp. 4-46]
Length = 201
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA L L+KK++ LLGPLAEAM ++ C
Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKRDTLLGPLAEAMRVASERIVTC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT DPC IC D RD S+++VVEDV+DLWALERS AV A YHVLGG LS LD I
Sbjct: 61 RECGNVDTCDPCTICRDHGRDPSMLVVVEDVSDLWALERSGAVTARYHVLGGILSALDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE++ + L+ER V ++RE+I A+SAT++GQTTAHY+ + L + VK+T+LA+G+P+G
Sbjct: 121 RPENLNLARLVERASVPEMREIILALSATVDGQTTAHYVTELLAHLPVKVTKLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR RT
Sbjct: 181 GELDYLDEGTLSAAIRQRTAF 201
>gi|209886653|ref|YP_002290510.1| recombination protein RecR [Oligotropha carboxidovorans OM5]
gi|259563701|sp|B6JJQ1|RECR_OLICO RecName: Full=Recombination protein recR
gi|209874849|gb|ACI94645.1| recombination protein RecR [Oligotropha carboxidovorans OM5]
Length = 201
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 153/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MASTVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC IC D +RD ++I+VV DV+DLWALER+ A YHVLG +LSPLD I
Sbjct: 61 HTCGNIDTQNPCTICSDPRRDPAIIVVVADVSDLWALERAHATQGRYHVLGATLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R +V ++ E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVTRAQVPEVTEIILALNATVDGQTTAHYVTDMLQDANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|299132606|ref|ZP_07025801.1| recombination protein RecR [Afipia sp. 1NLS2]
gi|298592743|gb|EFI52943.1| recombination protein RecR [Afipia sp. 1NLS2]
Length = 201
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MASTVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMTPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC IC D +RD S+I+VV DVADLWALER+ A + YHVLG +LSPLD I
Sbjct: 61 HTCGNIDTQNPCTICTDTRRDPSIIVVVADVADLWALERAAATHGRYHVLGATLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R + ++ E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVARAQAPEVTEIILALNATVDGQTTAHYVTDMLQEAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|39933694|ref|NP_945970.1| recombination protein RecR [Rhodopseudomonas palustris CGA009]
gi|192289051|ref|YP_001989656.1| recombination protein RecR [Rhodopseudomonas palustris TIE-1]
gi|73621510|sp|Q6NC55|RECR_RHOPA RecName: Full=Recombination protein recR
gi|229470341|sp|B3QCG7|RECR_RHOPT RecName: Full=Recombination protein recR
gi|39647540|emb|CAE26061.1| putative recombination protein recR [Rhodopseudomonas palustris
CGA009]
gi|192282800|gb|ACE99180.1| recombination protein RecR [Rhodopseudomonas palustris TIE-1]
Length = 200
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 153/195 (78%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +CS CGN+
Sbjct: 6 GPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMAPLASALQVAIDKIEVCSTCGNI 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D+ +PC +C D +RD+S+I+VV DVADLWALER+ A N YHVLG +LSPLD +GPED+
Sbjct: 66 DSQNPCTVCTDPRRDSSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGVGPEDLT 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I +L++R + E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G ELDYL
Sbjct: 126 IDALVKRAHDPGVAEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVGGELDYL 185
Query: 187 DDGTIFEAIRSRTVL 201
D+GT+ A+R RT+
Sbjct: 186 DEGTLSAAMRQRTLF 200
>gi|316932086|ref|YP_004107068.1| recombination protein RecR [Rhodopseudomonas palustris DX-1]
gi|315599800|gb|ADU42335.1| recombination protein RecR [Rhodopseudomonas palustris DX-1]
Length = 201
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 154/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PL+ A+ +K+ +C
Sbjct: 1 MASSVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMAPLSAALQVAIDKIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CGN+DT +PC +C D +RD+S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 TTCGNIDTQNPCTVCTDPRRDSSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L++R + E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIDALVKRAHDPGVAEIILALNATVDGQTTAHYVTDLLQDAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|92116085|ref|YP_575814.1| recombination protein RecR [Nitrobacter hamburgensis X14]
gi|122418734|sp|Q1QQZ3|RECR_NITHX RecName: Full=Recombination protein recR
gi|91798979|gb|ABE61354.1| recombination protein RecR [Nitrobacter hamburgensis X14]
Length = 200
Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 150/196 (76%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ G EI+ LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C IC
Sbjct: 3 SVAGPEIDRLIQLLARLPGLGPRSARRAALHLIKKREALMTPLASALQVAIDRIQICEIC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN+DT PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +GP+
Sbjct: 63 GNIDTRSPCTVCTDMRRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGVGPQ 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G EL
Sbjct: 123 DLTIDALVSRAHDPRVTEIVLALNATVDGQTTAHYITDLLGEANVKVTRLAHGVPVGGEL 182
Query: 184 DYLDDGTIFEAIRSRT 199
DYLD+GT+ A+R RT
Sbjct: 183 DYLDEGTLSAAMRQRT 198
>gi|27383225|ref|NP_774754.1| recombination protein RecR [Bradyrhizobium japonicum USDA 110]
gi|73621472|sp|Q89BN4|RECR_BRAJA RecName: Full=Recombination protein recR
gi|27356399|dbj|BAC53379.1| recombination protein [Bradyrhizobium japonicum USDA 110]
Length = 200
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 151/197 (76%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+++LAR+PG GPRSARRA LHL+KK+E L+ PL+ A+ +KV +C CG
Sbjct: 4 VAGPEIERLVQLLARLPGLGPRSARRAALHLIKKREALMMPLSSALQVALDKVQVCKTCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT +PC +C D +RD ++I+VV DVADLWALER+ A YHVLG +LSPLD +GP+D
Sbjct: 64 NIDTQNPCTVCTDPKRDPAIIVVVADVADLWALERANATQGRYHVLGATLSPLDGVGPQD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G ELD
Sbjct: 124 LTIDALVARAHAAEVHEVILALNATVDGQTTAHYITDLLQDANVKVTRLAHGVPVGGELD 183
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R RT+
Sbjct: 184 YLDEGTLSAAMRQRTLF 200
>gi|86747792|ref|YP_484288.1| recombination protein RecR [Rhodopseudomonas palustris HaA2]
gi|123099182|sp|Q2J2D3|RECR_RHOP2 RecName: Full=Recombination protein recR
gi|86570820|gb|ABD05377.1| DNA replication and repair protein RecR [Rhodopseudomonas palustris
HaA2]
Length = 201
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +C
Sbjct: 1 MAIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 KTCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R + E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|188580848|ref|YP_001924293.1| recombination protein RecR [Methylobacterium populi BJ001]
gi|238692886|sp|B1ZGA0|RECR_METPB RecName: Full=Recombination protein recR
gi|179344346|gb|ACB79758.1| recombination protein RecR [Methylobacterium populi BJ001]
Length = 201
Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM +++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRIAADRIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 HACGNVDTSDPCTICRDETRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L+ER ++E+I A++AT++GQTTAHY+ + LK + + ITRLA+G+P+G
Sbjct: 121 RPEHLTIALLVERASAPGVKEIILALNATVDGQTTAHYVTESLKPLGLTITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLTAAIRSRTAF 201
>gi|91974567|ref|YP_567226.1| recombination protein RecR [Rhodopseudomonas palustris BisB5]
gi|123735881|sp|Q13F14|RECR_RHOPS RecName: Full=Recombination protein recR
gi|91681023|gb|ABE37325.1| DNA replication and repair protein RecR [Rhodopseudomonas palustris
BisB5]
Length = 201
Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +C
Sbjct: 1 MATAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 KSCGNIDTRNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R + E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIDALVARAHDPAVSEIILALNATVDGQTTAHYVTDLLQEAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|115526799|ref|YP_783710.1| recombination protein RecR [Rhodopseudomonas palustris BisA53]
gi|122294450|sp|Q07H54|RECR_RHOP5 RecName: Full=Recombination protein recR
gi|115520746|gb|ABJ08730.1| recombination protein RecR [Rhodopseudomonas palustris BisA53]
Length = 201
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++L+R+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MATAVAGPEIERLIQLLSRLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC +C D +RD ++I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 KTCGNIDTQNPCTVCTDPRRDPAIIVVVADVADLWALERAHASNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVARAHDPQVSEIVLALNATVDGQTTAHYITDLLMEANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|154250714|ref|YP_001411538.1| recombination protein RecR [Parvibaculum lavamentivorans DS-1]
gi|171769553|sp|A7HPP8|RECR_PARL1 RecName: Full=Recombination protein recR
gi|154154664|gb|ABS61881.1| recombination protein RecR [Parvibaculum lavamentivorans DS-1]
Length = 199
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 150/194 (77%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+TG EIE LI +L+++PG GPRSARRA L L+KKKE LLGPLA AM + K +CS CG
Sbjct: 3 VTGPEIERLIALLSKLPGLGPRSARRAVLQLIKKKETLLGPLAAAMTDAMAKARICSACG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPCAIC D+ RD ++ +VE+V DLWALER+ A YHVLGG LS LD +GP+D
Sbjct: 63 NVDTQDPCAICADELRDPHILCIVEEVGDLWALERAGAHKGRYHVLGGVLSALDGVGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ER+ ++RE++ A++AT++GQTTAHYI D++ G+ + ++RLA+G+P+G ELD
Sbjct: 123 LNIGRLVERLTGGEVREVVLAMNATVDGQTTAHYITDRISGLGISVSRLAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSR 198
YLDDGT+ A++SR
Sbjct: 183 YLDDGTLAAAMKSR 196
>gi|90426317|ref|YP_534687.1| recombination protein RecR [Rhodopseudomonas palustris BisB18]
gi|122474846|sp|Q20WW8|RECR_RHOPB RecName: Full=Recombination protein recR
gi|90108331|gb|ABD90368.1| recombination protein RecR [Rhodopseudomonas palustris BisB18]
Length = 201
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LA++PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MAAAVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A + YHVLG +LSPLD +
Sbjct: 61 KVCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERAHAASGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L VK+TRLA+G+P+G
Sbjct: 121 GPDDLSIDALVARAHDPQVSEIVLALNATVDGQTTAHYITDLLMEAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|46203406|ref|ZP_00051579.2| COG0353: Recombinational DNA repair protein (RecF pathway)
[Magnetospirillum magnetotacticum MS-1]
Length = 201
Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 150/201 (74%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM ++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRIAAERIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 RSCGNVDTSDPCTICRDESRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L+ER ++E+I A++AT++GQTTAHYI + +K + + ITRLA+G+P+G
Sbjct: 121 RPEHLTIARLVERAGEPGVKEIILALNATVDGQTTAHYITESIKHLGLTITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLTAAIRSRTAF 201
>gi|312116064|ref|YP_004013660.1| recombination protein RecR [Rhodomicrobium vannielii ATCC 17100]
gi|311221193|gb|ADP72561.1| recombination protein RecR [Rhodomicrobium vannielii ATCC 17100]
Length = 204
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 150/197 (76%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QKK +G EIE LI +LA++PG GPRSARRA LHL+KK+EQLL PLA A+ +K+ +C
Sbjct: 5 QKKSSGAEIEELIALLAKLPGLGPRSARRAALHLIKKREQLLLPLARALGVAADKIAICK 64
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CGN+DT PCAIC D RDAS I VVE+V DLWALER+ V + YHVLGG+LSPLD G
Sbjct: 65 ECGNIDTQQPCAICADASRDASTICVVEEVGDLWALERAAIVRSRYHVLGGTLSPLDGRG 124
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P+D+ + L+ER + E+I A++AT+EGQ+TAHYI +L+G+ +K+TRLA G+P+G
Sbjct: 125 PDDLFLVKLMERARQPGVNEIILALNATVEGQSTAHYIAAELEGLPLKVTRLARGVPIGG 184
Query: 182 ELDYLDDGTIFEAIRSR 198
ELDYLD+GT+ AI+ R
Sbjct: 185 ELDYLDEGTLAAAIKLR 201
>gi|163851065|ref|YP_001639108.1| recombination protein RecR [Methylobacterium extorquens PA1]
gi|218529895|ref|YP_002420711.1| recombination protein RecR [Methylobacterium chloromethanicum CM4]
gi|240138199|ref|YP_002962671.1| recombination protein recR [Methylobacterium extorquens AM1]
gi|254560759|ref|YP_003067854.1| recombination protein recR [Methylobacterium extorquens DM4]
gi|238687346|sp|A9W381|RECR_METEP RecName: Full=Recombination protein recR
gi|254790775|sp|B7KVW7|RECR_METC4 RecName: Full=Recombination protein recR
gi|163662670|gb|ABY30037.1| recombination protein RecR [Methylobacterium extorquens PA1]
gi|218522198|gb|ACK82783.1| recombination protein RecR [Methylobacterium chloromethanicum CM4]
gi|240008168|gb|ACS39394.1| recombination protein recR [Methylobacterium extorquens AM1]
gi|254268037|emb|CAX23908.1| recombination protein recR [Methylobacterium extorquens DM4]
Length = 201
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 149/201 (74%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM ++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRVAAERIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 RSCGNVDTSDPCTICRDETRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L+ER ++E+I A++AT++GQTTAHY+ + +K + +TRLA+G+P+G
Sbjct: 121 RPEHLTIARLVERAGEPGVKEIILALNATVDGQTTAHYVTESIKPFGLTVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLTAAIRSRTAF 201
>gi|300024233|ref|YP_003756844.1| recombination protein RecR [Hyphomicrobium denitrificans ATCC
51888]
gi|299526054|gb|ADJ24523.1| recombination protein RecR [Hyphomicrobium denitrificans ATCC
51888]
Length = 201
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +KI G EIE L+++L+R+PG GPRSAR+A L L+K++ LL PL++A+ K+ C
Sbjct: 1 MSRKIAGPEIERLVQLLSRLPGLGPRSARKAVLSLLKRRNDLLLPLSDALQQAVEKISEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+DT PC++C D +RD S+I+VVE+V DLWALER+ V+A YHVLGG LSPLD I
Sbjct: 61 PVCGNLDTVSPCSVCSDPRRDQSLIVVVEEVGDLWALERANIVSARYHVLGGHLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + + +L+ R +++E++ A++AT+EGQ+TAHYI D+L DV ++RLA G+P+G
Sbjct: 121 GPEQLNVANLLARAAASEVKEILLALNATVEGQSTAHYISDQLAATDVTVSRLAQGVPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A ++R L
Sbjct: 181 GELDYLDDGTLAAAFKARRKL 201
>gi|83859369|ref|ZP_00952890.1| recombination protein RecR [Oceanicaulis alexandrii HTCC2633]
gi|83852816|gb|EAP90669.1| recombination protein RecR [Oceanicaulis alexandrii HTCC2633]
Length = 198
Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 147/193 (76%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI++L+++PG GPRSARRA+L L++K++QL+ PLAEAMA+ +K+ C+ CGN
Sbjct: 3 AGPEIERLIQLLSKLPGLGPRSARRASLSLLQKRDQLMKPLAEAMADAADKISACAECGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+D TDPC++C D +RD SVI VVE V DLWALER+ A YHVLGG LS LD +GPED+
Sbjct: 63 LDVTDPCSVCRDHRRDDSVICVVETVGDLWALERAGAFKGRYHVLGGVLSALDGVGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LIER + ++E+I A++AT++GQTTAH++ DKL V IT LA G+P+G ELDY
Sbjct: 123 NVAKLIERANREDVKEVILALNATVDGQTTAHFLADKLAEASVDITSLARGVPVGGELDY 182
Query: 186 LDDGTIFEAIRSR 198
LDDGT+ A RSR
Sbjct: 183 LDDGTLTAAFRSR 195
>gi|288959355|ref|YP_003449696.1| recombination protein [Azospirillum sp. B510]
gi|288911663|dbj|BAI73152.1| recombination protein [Azospirillum sp. B510]
Length = 197
Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 145/195 (74%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE LI++L+++PG GPRSARRA LHL+K+++ LL PL+EAMA + CS+CGN+
Sbjct: 3 GPEIERLIQLLSKLPGLGPRSARRAALHLMKRRDSLLVPLSEAMAAAGESIRACSVCGNL 62
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D+ DPC +C D RD SVI VVED DLWALER++A YHVLGG LS L +GP+D+
Sbjct: 63 DSRDPCTVCADPARDRSVICVVEDAGDLWALERTRAFRGTYHVLGGLLSALQGVGPDDLN 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER + +RE+I A++AT++GQTTAH + D+L DV ++RLA+G+P+G ELDYL
Sbjct: 123 LAGLAERAKDPAVREIILALNATVDGQTTAHVVTDRLTDSDVSVSRLAHGVPVGGELDYL 182
Query: 187 DDGTIFEAIRSRTVL 201
DDGT+ A+++R L
Sbjct: 183 DDGTLTAALKARRPL 197
>gi|23016070|ref|ZP_00055830.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Magnetospirillum magnetotacticum MS-1]
Length = 197
Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 144/197 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++L+R+PG GPRSARRA L LV+K+E LL PL +AMA KV CS+CG
Sbjct: 1 MVGPEIERLIQLLSRLPGLGPRSARRAALRLVEKRESLLIPLGQAMAEAAAKVRTCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DT DPCAIC D +RD S++ VVEDVA LWA+ER+ + Y VLGG LS LD IGPED
Sbjct: 61 NFDTIDPCAICADHRRDPSMLCVVEDVAGLWAMERTGSFKGRYAVLGGLLSALDGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI SL+ R + E+I A AT+EGQTTAHY+ ++L +V ++ LA+G+P+G ELD
Sbjct: 121 LGIDSLVARAADDTVTEVILATPATVEGQTTAHYLAERLAPCNVTVSGLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+LDDGTI A+R+R V
Sbjct: 181 HLDDGTITAALRARRVF 197
>gi|148556943|ref|YP_001264525.1| recombination protein RecR [Sphingomonas wittichii RW1]
gi|166221969|sp|A5VDM1|RECR_SPHWW RecName: Full=Recombination protein recR
gi|148502133|gb|ABQ70387.1| recombination protein RecR [Sphingomonas wittichii RW1]
Length = 198
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 146/194 (75%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ EIE L + LA++PG GPRSARRA LHL+KK+E LGPL A+ + +K+ C +CG
Sbjct: 1 MSSPEIETLTQALAKLPGLGPRSARRAVLHLLKKREAALGPLLRALEAVNDKLTSCHVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA ++ VVE+VADLWAL+RS+ +HVLGG LS L+ I PED
Sbjct: 61 NVDTGDPCGICADPRRDARMLCVVEEVADLWALDRSRLFPGRFHVLGGRLSALEGIRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I LI RI I E++ A++AT+EGQTTAHYI D+L+ V++T+LA+G+P+G ELD
Sbjct: 121 LSIDLLIGRIAAGGIDEVVLAMNATLEGQTTAHYIADRLESFPVRLTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|254293233|ref|YP_003059256.1| recombination protein RecR [Hirschia baltica ATCC 49814]
gi|254041764|gb|ACT58559.1| recombination protein RecR [Hirschia baltica ATCC 49814]
Length = 199
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 141/198 (71%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EI LI++++++PG GPRSARRA LHL+KK EQLL P+A AMA+ KV C
Sbjct: 1 MSNRSVGPEITRLIEMMSKLPGMGPRSARRAALHLLKKPEQLLAPMARAMADAAQKVSAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN DT +PCA+C RD +V+ V+ DV DLWA+ERS YHVLGG LS LD I
Sbjct: 61 DVCGNFDTLNPCAVCQATGRDEAVLCVLADVGDLWAMERSGVFRGRYHVLGGCLSALDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I SLI R +++E+I A++AT++GQTTAHY+ D+L+ V ++RLA+G+P+G
Sbjct: 121 GPDDLNIASLISRAGQDQVKEVILALNATVDGQTTAHYVADQLENSGVIVSRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
EL LDDGTI A SR
Sbjct: 181 GELGSLDDGTIAAAFSSR 198
>gi|154245783|ref|YP_001416741.1| recombination protein RecR [Xanthobacter autotrophicus Py2]
gi|229470346|sp|A7IGE1|RECR_XANP2 RecName: Full=Recombination protein recR
gi|154159868|gb|ABS67084.1| recombination protein RecR [Xanthobacter autotrophicus Py2]
Length = 201
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 145/199 (72%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI+++AR+PG GPRSARR LHL+KK+E L+ PLA AM + K+ C
Sbjct: 1 MPRAVAGPEIERLIQLIARLPGLGPRSARRVALHLIKKREALMAPLAAAMTDALGKIVEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVD DPC IC D RD ++VV DV DLWALER+ +NA YHVLGG LSPLD +
Sbjct: 61 RRCGNVDVCDPCTICTDTSRDRRTLVVVADVGDLWALERAGVLNAPYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ + L+ R+ ++ E+I A+ AT++GQTTAHYI D L+ V++TRLA G+P+G
Sbjct: 121 GPEDLNLAKLVTRVHEDEVGEVILALGATVDGQTTAHYITDLLREAHVRVTRLAQGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELDYLD+GT+ AIR+RT
Sbjct: 181 GELDYLDEGTLSAAIRART 199
>gi|294012440|ref|YP_003545900.1| recombination protein RecR [Sphingobium japonicum UT26S]
gi|292675770|dbj|BAI97288.1| recombination protein RecR [Sphingobium japonicum UT26S]
Length = 198
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 146/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + L+R+PG GPRSARRA LHL+KK+E L PL A+ + ++ CS+CG
Sbjct: 1 MASPEIEELTQALSRLPGLGPRSARRAVLHLLKKRESALEPLLRALDAVNERLVTCSLCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA + VVEDVADLWAL++S+ +HVLGG LS L+ + PED
Sbjct: 61 NVDTVDPCGICADPRRDARALCVVEDVADLWALDKSRLFPGRFHVLGGRLSALEGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ V++T+LA+G+P+G ELD
Sbjct: 121 LSIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPVRLTQLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 181 YLDEGTLAQALRARRPL 197
>gi|307294615|ref|ZP_07574457.1| recombination protein RecR [Sphingobium chlorophenolicum L-1]
gi|306879089|gb|EFN10307.1| recombination protein RecR [Sphingobium chlorophenolicum L-1]
Length = 198
Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 146/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + L+R+PG GPRSARRA LHL+KK+E L PL A+ + +++ C ICG
Sbjct: 1 MASPEIEALTQALSRLPGLGPRSARRAVLHLLKKRESALEPLLRALDAVNDRLVTCGICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA + VVEDVADLWAL++S+ +HVLGG LS L+ + PED
Sbjct: 61 NVDTVDPCGICADPRRDARALCVVEDVADLWALDKSRLFPGRFHVLGGRLSALEGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ V++T+LA+G+P+G ELD
Sbjct: 121 LSIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPVRLTQLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 181 YLDEGTLAQALRARRPL 197
>gi|197103837|ref|YP_002129214.1| recombination protein recR [Phenylobacterium zucineum HLK1]
gi|229470333|sp|B4RDT6|RECR_PHEZH RecName: Full=Recombination protein recR
gi|196477257|gb|ACG76785.1| recombination protein recR [Phenylobacterium zucineum HLK1]
Length = 200
Score = 228 bits (581), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 143/193 (74%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+K+++QLL PL++A+A +V CS CG+
Sbjct: 5 AGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCSTCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT DPCAIC D RDAS+I VVE+V LWA+ER+ A YHVLGG LS LD +GP+ +
Sbjct: 65 LDTQDPCAICSDGTRDASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVGPDAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R +RE+I A+ AT++GQTTAHY+ ++L G +V ++ LA G+P+G ELD+
Sbjct: 125 RVGPLVARASEPGVREVILALPATVDGQTTAHYLAERLAGAEVTVSMLARGVPVGGELDW 184
Query: 186 LDDGTIFEAIRSR 198
LDDGTI +A+R+R
Sbjct: 185 LDDGTIAQAMRAR 197
>gi|329890899|ref|ZP_08269242.1| recombination protein RecR [Brevundimonas diminuta ATCC 11568]
gi|328846200|gb|EGF95764.1| recombination protein RecR [Brevundimonas diminuta ATCC 11568]
Length = 200
Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 142/193 (73%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+K++EQLL PLA ++A +KV CS+CG+
Sbjct: 5 AGPEIERLISLLAKLPGMGPRSARRAALALLKRREQLLVPLAASLAETADKVVNCSVCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DT DPC++C DQ RD ++I VVE+ LWA+ERS A YHVLGG LS LD +GPE +
Sbjct: 65 PDTRDPCSVCADQSRDNALICVVEEAGALWAMERSGAFRGKYHVLGGLLSALDGVGPEQL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI R + + +E++ A+ AT++GQTTAHY+ ++L V++T LA G+P+G ELD+
Sbjct: 125 RIAELIGRAKGGEAKEVVLALPATVDGQTTAHYLAERLSAAGVQVTSLARGVPVGGELDW 184
Query: 186 LDDGTIFEAIRSR 198
LDDGTI +A+R+R
Sbjct: 185 LDDGTIIQALRAR 197
>gi|83313204|ref|YP_423468.1| recombinational DNA repair protein (RecF pathway) [Magnetospirillum
magneticum AMB-1]
gi|123540568|sp|Q2VZR6|RECR_MAGMM RecName: Full=Recombination protein recR
gi|82948045|dbj|BAE52909.1| Recombinational DNA repair protein (RecF pathway) [Magnetospirillum
magneticum AMB-1]
Length = 197
Score = 227 bits (579), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 147/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++L+R+PG GPRSARRA L LV+K+E LL PLA+AMA+ +V CS+CG
Sbjct: 1 MVGPEIERLIQLLSRLPGLGPRSARRAALRLVEKRESLLVPLAQAMADAAARVRTCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DT DPCAIC D +RD S++ VVEDVA LWA+ER+ + Y VLGG LS LD +GPED
Sbjct: 61 NFDTIDPCAICADHRRDPSMLCVVEDVAGLWAMERTGSFKGRYAVLGGLLSALDGVGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI+SL+ R I E+I A AT+EGQTTAHY+ ++L +V ++ LA+G+P+G ELD
Sbjct: 121 LGIESLVARALDPAITEIILATPATVEGQTTAHYVAERLAPCNVTVSGLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+LDDGTI A+R+R V
Sbjct: 181 HLDDGTITAALRARRVF 197
>gi|56551708|ref|YP_162547.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762297|ref|ZP_04760378.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752715|ref|YP_003225608.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|73621533|sp|Q5NPC4|RECR_ZYMMO RecName: Full=Recombination protein recR
gi|56543282|gb|AAV89436.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373200|gb|EER62830.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552078|gb|ACV75024.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 198
Score = 226 bits (577), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 149/194 (76%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ IENLIK LA +PG GPRSARRA L+L+KK+E L LA+A+ + + +C CG
Sbjct: 1 MSASPIENLIKSLAVMPGLGPRSARRAALYLIKKRETALYNLAQALDEVQQSLVICPECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+D+ +PC+IC D +RD +++ VVE+VADLWAL+RS+ +HVLGG LS LD I PED
Sbjct: 61 NIDSCNPCSICSDPKRDDALLCVVEEVADLWALDRSRLFAGRFHVLGGRLSALDGITPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R++ KI+E++ A++AT+EGQTTAHYI D L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LSIDALVKRVQSGKIKEVVLAMNATLEGQTTAHYITDCLEKYPVRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLDDGT+ +A+R+R
Sbjct: 181 YLDDGTLAQALRAR 194
>gi|103485745|ref|YP_615306.1| recombination protein RecR [Sphingopyxis alaskensis RB2256]
gi|123380172|sp|Q1GWJ9|RECR_SPHAL RecName: Full=Recombination protein recR
gi|98975822|gb|ABF51973.1| recombination protein RecR [Sphingopyxis alaskensis RB2256]
Length = 198
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 145/194 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L++ LAR+PG GPRSARRA LHL+KK+E PL A+ + ++ C+ CG
Sbjct: 1 MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPCAIC D +RDA + VVE+V+DLWAL++S+ YHVLGG LS L+ + P+D
Sbjct: 61 NIDTHDPCAICADPRRDARSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+ I E++ A++AT+EGQTTAHY+ ++L+G V++T+LA+G+P+G ELD
Sbjct: 121 LSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLEGYPVRLTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|302381705|ref|YP_003817528.1| recombination protein RecR [Brevundimonas subvibrioides ATCC 15264]
gi|302192333|gb|ADK99904.1| recombination protein RecR [Brevundimonas subvibrioides ATCC 15264]
Length = 200
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 141/193 (73%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+KK+EQLL PLA ++A KV CSICG
Sbjct: 5 AGPEIERLIALLAKLPGLGPRSARRAALALLKKREQLLEPLAASLAETAAKVVSCSICGT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DT DPC+IC D RD +I VVE+ LWA+ERS A YHVLGG LS LD +GPE +
Sbjct: 65 PDTRDPCSICSDGARDNGLICVVEEAGSLWAMERSGAFRGKYHVLGGLLSALDGVGPEAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R++ ++RE++ A+ AT++GQTTAHY+ +++ G V++T LA G+P+G +LD+
Sbjct: 125 RVAELVGRVKGGEVREVVLALPATVDGQTTAHYLAERVAGNGVEVTSLARGVPVGGDLDW 184
Query: 186 LDDGTIFEAIRSR 198
LDDGTI +A+R+R
Sbjct: 185 LDDGTIVQALRAR 197
>gi|209965589|ref|YP_002298504.1| recombination protein RecR, putative [Rhodospirillum centenum SW]
gi|209959055|gb|ACI99691.1| recombination protein RecR, putative [Rhodospirillum centenum SW]
Length = 201
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 152/201 (75%), Gaps = 4/201 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EI+ LI++LA++PG GPRSARRA LHL+KK++ L+ PLAEAMA + CS+CG
Sbjct: 1 MIGPEIDRLIQLLAKLPGLGPRSARRAALHLIKKRDSLMEPLAEAMAAAAAGIRTCSVCG 60
Query: 65 NVDTTDPCAICIDQQR----DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
N+DT DPC +C D +R D + + VVE+V DLWALER+ A LYHVLGG+LS L+ +
Sbjct: 61 NLDTGDPCHVCRDGERPGGRDRTTLCVVEEVGDLWALERTGAYRGLYHVLGGTLSALEGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ + L+ER ++ E+I A++AT+ GQTTAHY+ D+L+G +V+I+RLA+G+P+G
Sbjct: 121 GPDDLNVPKLLERASRPEVTEVILALNATVGGQTTAHYLADRLEGCEVRISRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+R L
Sbjct: 181 GELDYLDDGTLTAALRARRSL 201
>gi|254418095|ref|ZP_05031819.1| recombination protein RecR [Brevundimonas sp. BAL3]
gi|196184272|gb|EDX79248.1| recombination protein RecR [Brevundimonas sp. BAL3]
Length = 205
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 141/198 (71%), Gaps = 5/198 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+K++EQLL PLA ++A KV CS+CG
Sbjct: 5 AGPEIERLISLLAKLPGLGPRSARRAALALLKRREQLLVPLAASLAETAEKVVSCSVCGA 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DT DPCAIC D RD +I VVE+ LWA+ERS A YHVLGG LS LD +GPE +
Sbjct: 65 PDTRDPCAICSDGSRDNGLICVVEEAGALWAMERSGAFRGKYHVLGGLLSALDGVGPEHL 124
Query: 126 GIQSLIERIEVKK-----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I L+ R+ + +RE++ A+ AT++GQTTAHY+ +++ G DV++T LA G+P+G
Sbjct: 125 RIAELVGRVRHQNEGGGAVREVVLALPATVDGQTTAHYVAERISGPDVQVTSLARGVPVG 184
Query: 181 SELDYLDDGTIFEAIRSR 198
ELD+LDDGTI +A+R+R
Sbjct: 185 GELDWLDDGTIVQAMRAR 202
>gi|114799985|ref|YP_759100.1| recombination protein RecR [Hyphomonas neptunium ATCC 15444]
gi|123323639|sp|Q0C593|RECR_HYPNA RecName: Full=Recombination protein recR
gi|114740159|gb|ABI78284.1| recombination protein RecR [Hyphomonas neptunium ATCC 15444]
Length = 201
Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 144/198 (72%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ G E+ LI ++A++PG GPRSARR LHL+K+ + LL PLAEA+A K+ C
Sbjct: 1 MSQRSAGPELLRLIDLIAKLPGLGPRSARRVALHLLKRNDTLLKPLAEALAEAGAKIQKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CGN DT PCA+C RD +I VVEDV DLWALER + YHVLGG+LS +D I
Sbjct: 61 ATCGNFDTVQPCAVCQMPGRDDGIICVVEDVPDLWALERGGSFRGRYHVLGGALSAIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+GI SL+ R++ +RE+I A++AT++GQTTAHY+ D L G V +TRLA+G+P+G
Sbjct: 121 GPEDLGIASLVARVDAGGVREVILALNATVDGQTTAHYVADLLAGKGVDVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
ELD+LDDGT+ A+RSR
Sbjct: 181 GELDHLDDGTLAAALRSR 198
>gi|144898668|emb|CAM75532.1| Recombinational DNA repair protein (RecF pathway) [Magnetospirillum
gryphiswaldense MSR-1]
Length = 196
Score = 224 bits (571), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+++L+R+PG GPRSARR LHLV+K+E LL PLA+A++ + + V CS+CG
Sbjct: 1 MVGPEIERLMQLLSRLPGLGPRSARRVALHLVEKRETLLLPLAKALSAVGDSVKTCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D+ DPC+IC D +RD +++ VVE V LWA+ER+ + YHVLGG LS LD IGP+D
Sbjct: 61 NFDSVDPCSICADPRRDQTILCVVEGVGSLWAMERASVFSGRYHVLGGLLSALDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R++ IRE++ A AT+EGQTTAHYI D L + ++ LA+G+P+G ELD
Sbjct: 121 LGLGRLRARLD-GSIREVVVATPATVEGQTTAHYIADFLADCGITVSGLAHGVPVGGELD 179
Query: 185 YLDDGTIFEAIRSR 198
YLDDGTI A+R+R
Sbjct: 180 YLDDGTIGAALRAR 193
>gi|85707835|ref|ZP_01038901.1| recombinational DNA repair protein [Erythrobacter sp. NAP1]
gi|85689369|gb|EAQ29372.1| recombinational DNA repair protein [Erythrobacter sp. NAP1]
Length = 198
Score = 224 bits (570), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 142/194 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L LVK +EQ L L EA+ + + C ICG
Sbjct: 1 MASQEIEALSSALARLPGLGPRSARRAVLWLVKNREQALPALLEALDAVSETLVECQICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT+DPC IC D +RD + VVEDVAD+WAL+R++ YHVLGG LS LD IGP+D
Sbjct: 61 NVDTSDPCGICADPRRDPKSLCVVEDVADVWALDRARLFQGRYHVLGGKLSALDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ER ++ E++ A++AT+EGQTTAHY+ ++L ++IT+LA+G+P+G ELD
Sbjct: 121 LNIASLMERAANGEVEEVVLAMNATLEGQTTAHYLAERLDEHKLRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|126725866|ref|ZP_01741708.1| recombination protein RecR [Rhodobacterales bacterium HTCC2150]
gi|126705070|gb|EBA04161.1| recombination protein RecR [Rhodobacterales bacterium HTCC2150]
Length = 198
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
KEIENLI ++A++PG GPRSARRA LHL+KK+ QLL PL+ +M + C CGN+
Sbjct: 6 KEIENLIDMMAKLPGLGPRSARRAVLHLIKKRGQLLAPLSASMQEVTATARECVSCGNIG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+ C IC +R I VVEDVADLWA+ER++ YHVLGG+LS LD IGPE +GI
Sbjct: 66 TSVTCEICQSPKRATGEICVVEDVADLWAMERARVFKGRYHVLGGTLSALDAIGPEQLGI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ RI+ + I E+I A++ATI+GQTTAHYI D+++G V +T LA G+P+G ELDYLD
Sbjct: 126 PRLLSRIKAEDITEVILALNATIDGQTTAHYIADQIEG-HVTVTSLAQGVPIGGELDYLD 184
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 185 DGTISAALRAR 195
>gi|94495736|ref|ZP_01302316.1| recombinational DNA repair protein [Sphingomonas sp. SKA58]
gi|94425124|gb|EAT10145.1| recombinational DNA repair protein [Sphingomonas sp. SKA58]
Length = 198
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 143/194 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + L+R+PG GPRSARRA LHL+K++E + PL A+ + ++ C +CG
Sbjct: 1 MASPEIETLTQALSRLPGLGPRSARRAVLHLLKRREGAMEPLLRALEAVNERLVTCHLCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RD + VVEDV+DLWAL++S+ +HVLGG LS LD + PED
Sbjct: 61 NVDTVDPCGICADPRRDPRALCVVEDVSDLWALDKSRLFPGRFHVLGGRLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ +++T+LA+G+P+G ELD
Sbjct: 121 LTIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPIRLTQLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|85373242|ref|YP_457304.1| recombination protein RecR [Erythrobacter litoralis HTCC2594]
gi|122545155|sp|Q2NCT4|RECR_ERYLH RecName: Full=Recombination protein recR
gi|84786325|gb|ABC62507.1| recombinational DNA repair protein [Erythrobacter litoralis
HTCC2594]
Length = 198
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 142/194 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L LVKK++ L L EA+ + +++ C CG
Sbjct: 1 MASQEIEQLASTLARLPGLGPRSARRAVLWLVKKRDTALPALLEALEGVQDRLVECDTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT +PC IC D +RD I VVEDVADLWAL+R++ YHVLGG LS LD + PED
Sbjct: 61 NVDTQNPCGICADPRRDRKSICVVEDVADLWALDRARLFTGRYHVLGGKLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTT+HYI ++L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LNIANLLGRVEEGGIDEVVLAMNATLEGQTTSHYIAERLEEFPVRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|114770076|ref|ZP_01447614.1| recombination protein RecR [alpha proteobacterium HTCC2255]
gi|114548913|gb|EAU51796.1| recombination protein RecR [alpha proteobacterium HTCC2255]
Length = 198
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 142/193 (73%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++I+ LI ++A++PG GPRSARRA LHL+KK++ LL PL++A+ N+ C CGN
Sbjct: 3 NNQDIDILIALMAKLPGLGPRSARRAVLHLIKKRDILLSPLSDAIYNVAQTARECLSCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT D C ICI+ +R I VVEDV+DLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 IDTKDICEICINSKRGNGQICVVEDVSDLWAMERSNVFKGRYHVLGGNLSALDGIGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + I E+I A++AT++GQTTAHYI D+L +DV +T LA G+P+G ELDY
Sbjct: 123 RIPHLVKRVKGENINEIILALNATVDGQTTAHYIADQLDEMDVAVTSLAQGVPIGGELDY 182
Query: 186 LDDGTIFEAIRSR 198
LDDGTI A+ +R
Sbjct: 183 LDDGTISAALNAR 195
>gi|332185194|ref|ZP_08386943.1| recombination protein RecR [Sphingomonas sp. S17]
gi|332014918|gb|EGI56974.1| recombination protein RecR [Sphingomonas sp. S17]
Length = 198
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 146/194 (75%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + LARIPG GPRSARRA LHL+KK+E L PL A+A + ++ CS CG
Sbjct: 1 MASPEIEALTQALARIPGLGPRSARRAVLHLLKKREAALAPLLSALAAVEERLETCSTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT +PCAIC D +RD + + +VE+VADLWALERS+ +HVLGG LS LD + PED
Sbjct: 61 NIDTANPCAICADPRRDPAALCIVEEVADLWALERSRLFPGRFHVLGGRLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ RIE I E++ A++AT+EGQTTAHYI ++++ V++T+LA+G+P+G ELD
Sbjct: 121 LAIDALVRRIEKGAIDEIVLAMNATLEGQTTAHYIAERIERFPVRVTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|259415556|ref|ZP_05739477.1| recombination protein RecR [Silicibacter sp. TrichCH4B]
gi|259348786|gb|EEW60548.1| recombination protein RecR [Silicibacter sp. TrichCH4B]
Length = 199
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+IE LI ++A++PG GPRSARRA LHL++K+ +L PLA+AM + C CGNV
Sbjct: 7 SDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMGRVAETARECLNCGNVG 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D CA+C D+ R + VVEDVADLWA+ER+ YHVLGG+LS LD +GPED+ I
Sbjct: 67 TSDICALCADETRANGELCVVEDVADLWAMERAGVFRGRYHVLGGTLSALDAVGPEDLRI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + + E+I A++ATI+GQTTAHYI D+L+G VK+T LA G+P+G ELDYLD
Sbjct: 127 PRLVDRVATEGVNEVILALNATIDGQTTAHYIADQLEG-RVKLTSLAQGVPIGGELDYLD 185
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 186 DGTISAALRAR 196
>gi|99080005|ref|YP_612159.1| recombination protein RecR [Ruegeria sp. TM1040]
gi|122398457|sp|Q1GKB9|RECR_SILST RecName: Full=Recombination protein recR
gi|99036285|gb|ABF62897.1| recombination protein RecR [Ruegeria sp. TM1040]
Length = 199
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+IE LI ++A++PG GPRSARRA LHL++K+ +L PLA+AM+ + C CGNV
Sbjct: 7 SDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECLNCGNVG 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D CA+C D+ R + VVEDVADLWA+ER+ YHVLGG+LS LD IGPED+ I
Sbjct: 67 TSDICALCEDETRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIGPEDLRI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + + E+I A++ATI+GQTTAHYI D+L G VK+T LA G+P+G ELDYLD
Sbjct: 127 PRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQLSG-RVKLTSLAQGVPIGGELDYLD 185
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 186 DGTISAALRAR 196
>gi|296284447|ref|ZP_06862445.1| recombination protein RecR [Citromicrobium bathyomarinum JL354]
Length = 197
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 146/197 (74%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA LHLVKK+E L L +A+ ++ + + C ICG
Sbjct: 1 MASQEIETLASALARLPGLGPRSARRAVLHLVKKRETALPALLDALLSVQDTLEECRICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA I VVEDVADLWAL+R+K + +HVLGG LS LD + PED
Sbjct: 61 NVDTQDPCGICSDPRRDAKSICVVEDVADLWALDRAKLFSGTFHVLGGRLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+E + E++ A++AT+EGQTTAHY+ ++L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LAIPGLLARVEA-GVDEVVLAMNATLEGQTTAHYLAERLEDFPVRITQLAHGLPVGGELD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 180 YLDEGTLAQALRARRPL 196
>gi|83594800|ref|YP_428552.1| RecR protein [Rhodospirillum rubrum ATCC 11170]
gi|123525548|sp|Q2RNN0|RECR_RHORT RecName: Full=Recombination protein recR
gi|83577714|gb|ABC24265.1| RecR protein [Rhodospirillum rubrum ATCC 11170]
Length = 197
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 138/194 (71%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ EI+ LI +LAR+PG GPRSARRA LHL+K++E L+ PL EA+ + V LC +CG
Sbjct: 1 MSAGEIDRLIGLLARLPGLGPRSARRAALHLLKRRESLMDPLMEALGAVAASVRLCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+DT PC+IC D +RD ++I VV DVADLWALER + YHVLGG LS +D +GPED
Sbjct: 61 TLDTRAPCSICADPRRDGTLICVVRDVADLWALERGGVFSGRYHVLGGLLSAIDGVGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R+ + E+I A+ AT+EGQTTAH I D ++ + ++ LA G+P+G ELD
Sbjct: 121 LGLDRLAARVAEGPVVEVILALPATVEGQTTAHVIADLIEPKGITVSGLAQGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLDDGT+ A+R+R
Sbjct: 181 YLDDGTLTAALRAR 194
>gi|254464756|ref|ZP_05078167.1| recombination protein RecR [Rhodobacterales bacterium Y4I]
gi|206685664|gb|EDZ46146.1| recombination protein RecR [Rhodobacterales bacterium Y4I]
Length = 199
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + EIE+LI ++A++PG GPRSARRA LHL++K+ LL PLA+ M+ + C C
Sbjct: 3 KNSNSEIEDLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLADVMSEVAATARECLNC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TT+ C IC D++R + VVEDVADLWA+ER+ YHVLGG+LS LD +GPE
Sbjct: 63 GNAGTTEICPICTDERRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAVGPE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G VK+T LA G+P+G EL
Sbjct: 123 DLRIPRLVDRVATEGVSEVILALNATIDGQTTAHYIADQLQG-QVKLTSLAQGVPIGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
DYLDDGTI A+ +R
Sbjct: 182 DYLDDGTISAALSAR 196
>gi|87200908|ref|YP_498165.1| recombination protein RecR [Novosphingobium aromaticivorans DSM
12444]
gi|123488327|sp|Q2G492|RECR_NOVAD RecName: Full=Recombination protein recR
gi|87136589|gb|ABD27331.1| recombination protein RecR [Novosphingobium aromaticivorans DSM
12444]
Length = 198
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 142/194 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L L+K++E L L A+ + + C +CG
Sbjct: 1 MASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT++PC IC D +RD I VVE+VADLWAL+R++ YHVLGG LS L+ + PED
Sbjct: 61 NVDTSNPCGICTDHRRDQRSICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL++R+ I E++ A++AT+EGQTTAHYI ++L+G V++T+LA+G+P+G ELD
Sbjct: 121 LTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEGAAVRVTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRAR 194
>gi|86140178|ref|ZP_01058740.1| recombination protein RecR [Roseobacter sp. MED193]
gi|85823115|gb|EAQ43328.1| recombination protein RecR [Roseobacter sp. MED193]
Length = 199
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
EIE+LI ++A++PG GPRSARRA LHL++K+ LL PLAE+++ + + C CGNV
Sbjct: 7 SEIEHLIALMAKLPGMGPRSARRAVLHLIRKRTLLLTPLAESLSQVASSARECLNCGNVG 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D C IC D++R I VVE V+DLWA+ER+ + YHVLGG+LS LD IGP+++ I
Sbjct: 67 TQDICGICSDERRANGEICVVETVSDLWAMERAASFKGRYHVLGGTLSALDAIGPDELRI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + +RE+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDYLD
Sbjct: 127 PRLVDRVASEGVREVILALNATIDGQTTAHYIADQLEG-QVQLTTLAQGVPIGGELDYLD 185
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+++R L
Sbjct: 186 DGTIIAALKARKTL 199
>gi|221233209|ref|YP_002515645.1| recombination protein RecR [Caulobacter crescentus NA1000]
gi|21263936|sp|Q9ABF8|RECR_CAUCR RecName: Full=Recombination protein recR
gi|254790757|sp|B8GYE0|RECR_CAUCN RecName: Full=Recombination protein recR
gi|220962381|gb|ACL93737.1| Recombination protein recR [Caulobacter crescentus NA1000]
Length = 200
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 135/192 (70%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE LI +L+++PG GPRS RRA L L+KK++ LL PLA AMA KV C CG++
Sbjct: 6 GPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLATAMAEAQAKVRTCGTCGSL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D TDPCA+C D RD ++ VVE+V +WA+ER + YHVLGG LS LD IGPE +
Sbjct: 66 DVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHVLGGLLSALDGIGPEALR 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L+ R+ + E+I A+ AT++GQTTAHYI D+L +V +T LA G+P+G +LD+L
Sbjct: 126 IGELVGRVADGSVAEVILALPATVDGQTTAHYIADRLAKTNVPVTMLARGVPVGGDLDWL 185
Query: 187 DDGTIFEAIRSR 198
DDGTI +A+R+R
Sbjct: 186 DDGTIAQALRAR 197
>gi|89056369|ref|YP_511820.1| recombination protein RecR [Jannaschia sp. CCS1]
gi|122497564|sp|Q28KG7|RECR_JANSC RecName: Full=Recombination protein recR
gi|88865918|gb|ABD56795.1| recombination protein RecR [Jannaschia sp. CCS1]
Length = 199
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 137/196 (69%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T K+IE LI I+AR+PG GPRSARRA L L+KK+ L+ PLAE MA + C CGN
Sbjct: 4 TSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVNCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T D C IC+D +R I VVEDVADLWA+ER +A YHVLGG+LS LD +GPED+
Sbjct: 64 IGTGDLCEICMDVRRATGEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGPEDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L R+ + I E+I A++AT++GQTTAHYI D+L V ++ LA G+P+G ELDY
Sbjct: 124 RIPKLRARMADEGITEVILALNATVDGQTTAHYIADELAPTGVTLSSLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 184 LDDGTISAALRARKSL 199
>gi|254452325|ref|ZP_05065762.1| recombination protein RecR [Octadecabacter antarcticus 238]
gi|198266731|gb|EDY91001.1| recombination protein RecR [Octadecabacter antarcticus 238]
Length = 197
Score = 218 bits (555), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI ++AR+PG GPRSARRA LHL+KK+ QLL PLAEA+ + C CGN+
Sbjct: 6 KDIDALINLMARLPGLGPRSARRAVLHLIKKRGQLLNPLAEALTIVGATARECLNCGNIG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D C IC ++R+ I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 66 TSDLCGICESEKRNVGQICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDDIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +RI + I E+I A+ ATI+GQTTAHYI D+L G V++T LA G+P+G ELDYLD
Sbjct: 126 PKLRDRITTEHITEVILALGATIDGQTTAHYIADELHG--VQVTTLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKAL 197
>gi|163737247|ref|ZP_02144665.1| recombination protein RecR [Phaeobacter gallaeciensis BS107]
gi|163740343|ref|ZP_02147737.1| recombination protein RecR [Phaeobacter gallaeciensis 2.10]
gi|161386201|gb|EDQ10576.1| recombination protein RecR [Phaeobacter gallaeciensis 2.10]
gi|161389851|gb|EDQ14202.1| recombination protein RecR [Phaeobacter gallaeciensis BS107]
Length = 199
Score = 218 bits (555), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + +IE+LI ++A++PG GPRSARRA LHL++K+ LL PLAE M+ + C C
Sbjct: 3 KNSTTDIEDLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLAETMSEVAATARECLNC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GNV T D C IC D R + VVEDV+DLWA+ER+ YHVLGG+LS LD +GPE
Sbjct: 63 GNVGTGDLCTICEDMTRANGELCVVEDVSDLWAMERAAVFKGRYHVLGGTLSALDAVGPE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I L++R++ +++ E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G EL
Sbjct: 123 DLRIPRLVDRVQAEQVSEVILALNATIDGQTTAHYIADQLSG-QVRLTSLAQGVPIGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
DYLD+GTI A+R+R
Sbjct: 182 DYLDEGTITAALRAR 196
>gi|297717872|gb|ADI50079.1| recombination protein RecR [Candidatus Odyssella thessalonicensis
L13]
Length = 197
Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 140/194 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EI+ LI+ L+++PG GPRS RR LHL+KK+E++ PL + MA KV C IC
Sbjct: 1 MNSPEIQLLIQHLSKLPGLGPRSGRRVALHLLKKREKIFRPLIQVMAEAEQKVRTCHICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+D +DPC +C D +RD + VVEDVADLWALER+ +YHVLGG LS +D IGP+
Sbjct: 61 ALDASDPCTLCTDPKRDPHQLCVVEDVADLWALERANTYRGVYHVLGGVLSAIDGIGPQQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQSL++R+ + E+I A++AT++GQTT HY++++L+ +KIT LA+G+P+G ELD
Sbjct: 121 LTIQSLLDRVAKGSVHEVILALNATVDGQTTIHYLIEQLREHKIKITTLAHGVPIGGELD 180
Query: 185 YLDDGTIFEAIRSR 198
YLD+GT+F A ++R
Sbjct: 181 YLDEGTLFTAFQAR 194
>gi|294678280|ref|YP_003578895.1| recombination protein RecR [Rhodobacter capsulatus SB 1003]
gi|294477100|gb|ADE86488.1| recombination protein RecR [Rhodobacter capsulatus SB 1003]
Length = 199
Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 133/193 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EIE LI +AR+PG GPRSARRA LHL++K+E + PLA A++ + C ICGN+
Sbjct: 7 EIEALIAQMARLPGLGPRSARRAVLHLLRKREGQMAPLAAALSRVAETARDCPICGNIAM 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC R I VVEDVADLWALER A YHVLGG+LS LD IGPE++ I
Sbjct: 67 GASCEICDSPARAIGEICVVEDVADLWALERGGAFKGRYHVLGGTLSALDAIGPEELRIP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI RI + + E+I A++AT+EGQTTAHYI + L+G V++T LA G+P+G ELDYLDD
Sbjct: 127 QLIARIRAEAVTEVILALNATVEGQTTAHYIAEALEGTGVRVTSLAQGVPIGGELDYLDD 186
Query: 189 GTIFEAIRSRTVL 201
GTI A+R+R L
Sbjct: 187 GTISAALRARRAL 199
>gi|149185874|ref|ZP_01864189.1| recombinational DNA repair protein [Erythrobacter sp. SD-21]
gi|148830435|gb|EDL48871.1| recombinational DNA repair protein [Erythrobacter sp. SD-21]
Length = 198
Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 143/197 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L LVK++E L L EA+A + + C CG
Sbjct: 1 MASQEIETLASALARLPGLGPRSARRAVLWLVKRRESALPALLEALATVGEALVECETCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDTT+PC IC D +RD + VVEDVADLWAL+R+K YHVLGG LS LD I PED
Sbjct: 61 NVDTTNPCGICADPRRDGKGLCVVEDVADLWALDRAKLFTGKYHVLGGKLSALDGIRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ R+E + E++ A++AT+EGQTTAHY+ ++L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LNIASLLSRVEEGGVDEVVLAMNATLEGQTTAHYLAERLEDFPVRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 181 YLDEGTLAQALRARRPL 197
>gi|315497914|ref|YP_004086718.1| recombination protein recr [Asticcacaulis excentricus CB 48]
gi|315415926|gb|ADU12567.1| recombination protein RecR [Asticcacaulis excentricus CB 48]
Length = 200
Score = 217 bits (552), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE L+ +L+++PG GPRSARRA L L+KK+EQLL PL AM + +V C ICG +
Sbjct: 6 GPEIERLMALLSKLPGLGPRSARRAALALLKKREQLLIPLTAAMQDAAERVTSCHICGAL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T DPCA C D RDA++I VVE+ + LWA+ER A + YHVLGG LS LD + PED+
Sbjct: 66 STRDPCATCADPTRDAAMICVVEEDSALWAMERVGAFSGRYHVLGGLLSALDGVRPEDLR 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSELD 184
+ L++R+ + EL+ A+ AT+EGQTTAHYI D++K + +V IT LA G+P+G ELD
Sbjct: 126 LSGLMQRVSSGGVEELVMALPATVEGQTTAHYIADRVKPLAPEVTITHLARGVPVGGELD 185
Query: 185 YLDDGTIFEAIRSR 198
+LDDGTI A +SR
Sbjct: 186 WLDDGTIAHAFKSR 199
>gi|294085058|ref|YP_003551818.1| recombination protein RecR [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664633|gb|ADE39734.1| recombination protein RecR [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 197
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 139/190 (73%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L R+PG GPRSARRA L L+K +++L+ PLA+ + +I V C CGN+DT
Sbjct: 5 LENLIRRLGRLPGLGPRSARRAVLFLLKNRDRLMLPLAQELHDIARTVRPCVDCGNLDTA 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD S I VVEDV DLWA+ER+ YHVLGG+LS LD GP+D+ I
Sbjct: 65 DLCHICRDDRRDKSRICVVEDVGDLWAMERAAVFRGRYHVLGGTLSALDGRGPDDLAIDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R + ++ E+I A+SAT++GQTTAHYI +KL ++ +TRLA+G+P+G ELDYLDDG
Sbjct: 125 LLRRAQAGEVVEIILALSATVDGQTTAHYIAEKLAPSNLDVTRLAHGVPVGGELDYLDDG 184
Query: 190 TIFEAIRSRT 199
T+ +A+++R
Sbjct: 185 TLAQALKARA 194
>gi|119386355|ref|YP_917410.1| recombination protein RecR [Paracoccus denitrificans PD1222]
gi|171704476|sp|A1B870|RECR_PARDP RecName: Full=Recombination protein recR
gi|119376950|gb|ABL71714.1| recombination protein RecR [Paracoccus denitrificans PD1222]
Length = 199
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 131/192 (68%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE LI +AR+PG GPRSARR LHL++++ + LA MAN+ C +CGNV
Sbjct: 5 GDEIETLIATMARLPGLGPRSARRIVLHLIRRRTGQMAQLAGLMANVAEHARECLVCGNV 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+D C IC D R I VV DVADLWALER +A + YHVLGGSLS LD +GPED+
Sbjct: 65 TGSDICPICEDPDRATGEICVVTDVADLWALERGRAFHGRYHVLGGSLSALDEVGPEDLR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I LI RI + I E+I A+SAT+EGQTTAHYI + L V +T LA G+P+G ELDYL
Sbjct: 125 IPQLIARIAEEGITEVILALSATVEGQTTAHYIAEALAPTGVAVTGLAQGVPIGGELDYL 184
Query: 187 DDGTIFEAIRSR 198
DDGTI A+R+R
Sbjct: 185 DDGTITAALRAR 196
>gi|255264134|ref|ZP_05343476.1| recombination protein RecR [Thalassiobium sp. R2A62]
gi|255106469|gb|EET49143.1| recombination protein RecR [Thalassiobium sp. R2A62]
Length = 197
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 139/191 (72%), Gaps = 2/191 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I++LI+++A++PG GPRSARRA LHL+KK+ L PLA+ M + C CGNV
Sbjct: 6 KDIDDLIEMMAKLPGLGPRSARRAVLHLIKKRSLLFTPLADTMQTVAATARECLNCGNVG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C+IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 66 TTDICSICESEKRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI RI+ ++I E+I A++ATI+GQTTAHYI D+L I V T LA G+P+G ELDYLD
Sbjct: 126 PKLITRIQTEEITEVILALNATIDGQTTAHYIADQLPTITV--TSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 184 DGTITAALRAR 194
>gi|126739562|ref|ZP_01755254.1| recombination protein RecR [Roseobacter sp. SK209-2-6]
gi|126719208|gb|EBA15918.1| recombination protein RecR [Roseobacter sp. SK209-2-6]
Length = 199
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 141/191 (73%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+IENLI ++A++PG GPRSARRA LHL++K+ LL PLA+ M+ + C CGNV
Sbjct: 7 SDIENLIGLMAKLPGMGPRSARRAVLHLIRKRGLLLTPLADCMSEVAATARECLNCGNVG 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D C++C D+ R + VVE V+DLWA+ER+ YHVLGG+LS LD +GPED+ I
Sbjct: 67 TSDICSLCNDEDRANGELCVVETVSDLWAMERAAVFKGRYHVLGGTLSALDAVGPEDLHI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + IRE+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDYLD
Sbjct: 127 PRLVDRVTSEGIREVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDYLD 185
Query: 188 DGTIFEAIRSR 198
+GTI A+R+R
Sbjct: 186 EGTITAALRAR 196
>gi|260574233|ref|ZP_05842238.1| recombination protein RecR [Rhodobacter sp. SW2]
gi|259023699|gb|EEW26990.1| recombination protein RecR [Rhodobacter sp. SW2]
Length = 199
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 135/190 (71%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+IE LI+++AR+PG GPRSARRA L L+KK+ L+ PLA+AMA + C+ CGN+
Sbjct: 7 DIEQLIELMARLPGLGPRSARRAVLVLLKKRGALMAPLAQAMAQVALSARDCTTCGNIGA 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC D +R + VVEDVADLWA+ER A YHVLGG+LSPLD +GP+ + I
Sbjct: 67 GDTCAICADPRRATGELCVVEDVADLWAMERGGAFKGRYHVLGGTLSPLDAVGPDTLRIP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + I E+I A++AT++GQTTAHYI D L V IT LA G+P+G ELDYLDD
Sbjct: 127 RLLARVAEEGISEVILALNATVDGQTTAHYIADVLGASGVAITSLAQGVPIGGELDYLDD 186
Query: 189 GTIFEAIRSR 198
GTI A+++R
Sbjct: 187 GTIGAALKAR 196
>gi|114568988|ref|YP_755668.1| DNA replication and repair protein RecR [Maricaulis maris MCS10]
gi|122316784|sp|Q0ASK7|RECR_MARMM RecName: Full=Recombination protein recR
gi|114339450|gb|ABI64730.1| DNA replication and repair protein RecR [Maricaulis maris MCS10]
Length = 201
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 144/201 (71%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ G EIE LI +LA++PG GPRSARRA L+L+ KK+ L+ PLAEA+A+ +K+ C
Sbjct: 1 MKTASAGPEIERLISLLAKLPGLGPRSARRAALNLLGKKDALMRPLAEALADAADKIRAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGN+D +DPC +C R + I VVE V DLWALER+ A YHVLGG LS LD +
Sbjct: 61 SECGNMDVSDPCTVCAAPNRLDAAICVVETVGDLWALERAGAFKGRYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PED+ I L+ER +++ E++ A++AT++GQTTAHY+ D++ G +V IT LA G+P+G
Sbjct: 121 RPEDLNITKLVERSAREEVSEIVLALNATVDGQTTAHYLADRMAGCNVSITSLARGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A RSR+ +
Sbjct: 181 GELDYLDDGTLAAAFRSRSTV 201
>gi|126733478|ref|ZP_01749225.1| recombination protein RecR [Roseobacter sp. CCS2]
gi|126716344|gb|EBA13208.1| recombination protein RecR [Roseobacter sp. CCS2]
Length = 197
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 141/194 (72%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++++NLI ++A++PG GPRSARRA LHL+KK+ +L PLA+AM + V C CGNV
Sbjct: 6 EDLDNLIALMAKLPGLGPRSARRAVLHLIKKRSLVLLPLADAMQRVGATVRECLNCGNVC 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC ++R I VVEDVADLWA+ER++ YHVLGG+LS LD IGP+++ I
Sbjct: 66 TTDICDICSTEKRATGQIAVVEDVADLWAMERAQVFKGRYHVLGGTLSALDAIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+RI+ + + E+I A+ ATI+GQTTAHYI D+L GI V T LA G+P+G ELDYLD
Sbjct: 126 PKLIDRIKAENVTEVILALGATIDGQTTAHYIADQLPGITV--TSLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKAL 197
>gi|254437816|ref|ZP_05051310.1| recombination protein RecR [Octadecabacter antarcticus 307]
gi|198253262|gb|EDY77576.1| recombination protein RecR [Octadecabacter antarcticus 307]
Length = 197
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI ++AR+PG GPRSARRA LHL+KK+ QLL PLAEA+ + C CGN+
Sbjct: 6 KDIDALIDLMARLPGLGPRSARRAVLHLIKKRGQLLNPLAEALTIVGATARECLNCGNIG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T++ C IC ++R+ I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 66 TSEICGICKSEKRNVGQICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDDIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +RI + I E+I A+ ATI+GQTTAHYI D+L G V++T LA G+P+G ELDYLD
Sbjct: 126 PKLRDRITTEHITEVILALGATIDGQTTAHYIADELHG--VQVTTLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKAL 197
>gi|56698391|ref|YP_168764.1| recombination protein RecR [Ruegeria pomeroyi DSS-3]
gi|73621515|sp|Q5LMJ4|RECR_SILPO RecName: Full=Recombination protein recR
gi|56680128|gb|AAV96794.1| recombination protein RecR [Ruegeria pomeroyi DSS-3]
Length = 198
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 140/194 (72%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI+++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGNV
Sbjct: 6 KDIDALIELMARLPGLGPRSARRAVLHLIRKRALLLTPLADLMGQVAATARECLNCGNVG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D C IC D++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ I
Sbjct: 66 TSDICDICTDERRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDGVGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +R+ + I E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDYLD
Sbjct: 126 PRLADRVTAEAISEVILALNATIDGQTTAHYIADQLGG-RVRLTSLAQGVPIGGELDYLD 184
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+R+R L
Sbjct: 185 DGTISAAMRARKEL 198
>gi|149203325|ref|ZP_01880295.1| recombination protein RecR [Roseovarius sp. TM1035]
gi|149143158|gb|EDM31197.1| recombination protein RecR [Roseovarius sp. TM1035]
Length = 197
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + + C+ CGN+
Sbjct: 5 RDIDALIDMMARLPGLGPRSARRAVLHLIRKRALLLSPLAKLMQTVADTARECATCGNIG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TT+ C IC + +R I VVEDVADLWA+ER +A YHVLGG+LS LD++GPE + I
Sbjct: 65 TTEICDICTNAKRANGQICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDQVGPEVLRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R++ + I E+I A++AT+EGQTTAHYI D+L G V +T LA G+P+G ELDYLD
Sbjct: 125 PALLARVDSEAITEVILALNATVEGQTTAHYIADQLDG-RVTLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+ +R
Sbjct: 184 DGTISAALSAR 194
>gi|260426216|ref|ZP_05780195.1| recombination protein RecR [Citreicella sp. SE45]
gi|260420708|gb|EEX13959.1| recombination protein RecR [Citreicella sp. SE45]
Length = 197
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
EI+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+AM + C CGNV
Sbjct: 5 NEIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLQPLADAMGAVATSARECLNCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC D++R + VVEDVADLWA+ERS YHVLGG+LS LD +GPE++ I
Sbjct: 65 TAEICPICADERRGNGQLCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDSVGPEELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+E + I E+I A++AT++GQTTAHYI D+L+ V++T LA G+P+G ELDYLD
Sbjct: 125 PQLVHRVETEAITEVILALNATVDGQTTAHYIADQLE-TRVELTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+ +R
Sbjct: 184 DGTITAALNAR 194
>gi|254488517|ref|ZP_05101722.1| recombination protein RecR [Roseobacter sp. GAI101]
gi|214045386|gb|EEB86024.1| recombination protein RecR [Roseobacter sp. GAI101]
Length = 197
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++I+ LI +++R+PG GPRSARRA LHL++K+ LL PLA+ M + C CGNV
Sbjct: 5 RDIDALIDLMSRLPGLGPRSARRAVLHLIRKRALLLTPLADVMQTVAATARECLNCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 65 TTDICDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R+ + I E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDYLD
Sbjct: 125 PRLIDRVSTENITEVILALNATIDGQTTAHYIADQLDG-RVQLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 184 DGTITAAMRAR 194
>gi|84500403|ref|ZP_00998652.1| recombination protein RecR [Oceanicola batsensis HTCC2597]
gi|84391356|gb|EAQ03688.1| recombination protein RecR [Oceanicola batsensis HTCC2597]
Length = 197
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G +IE LI ++AR+PG GPRSARRA L +++KKE LL PLA+ M ++ V C+ CGN+
Sbjct: 4 GGDIEALIDMMARLPGLGPRSARRAVLQMIRKKELLLTPLADLMHHVAATVRECATCGNI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD +GPE++
Sbjct: 64 GAGQICDICASEKRATGEICVVEDVADLWAMERSAVFGGRYHVLGGTLSALDAVGPEELR 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L++R+ +++ E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDYL
Sbjct: 124 IPKLVQRVTDERVTEVILALNATVDGQTTAHYIADQLEG-RVRLTSLAQGVPIGGELDYL 182
Query: 187 DDGTIFEAIRSR 198
DDGTI A+R+R
Sbjct: 183 DDGTITAALRAR 194
>gi|167648528|ref|YP_001686191.1| recombination protein RecR [Caulobacter sp. K31]
gi|189029356|sp|B0T1T2|RECR_CAUSK RecName: Full=Recombination protein recR
gi|167350958|gb|ABZ73693.1| recombination protein RecR [Caulobacter sp. K31]
Length = 200
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +L+++PG GPRS RRA L L+KK++ LL PL A+ + KV CS+CG+
Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLTAALVDAQAKVRTCSVCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT+DPCAIC D RD ++ VVE+V LWA+ER + YHVLGG LS LD +GPE +
Sbjct: 65 LDTSDPCAICSDAARDNRLLCVVEEVGSLWAMERGGSFKGRYHVLGGLLSALDGVGPEAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R + ++ E+I A+ AT++GQTTAHY+ D+L V +T LA G+P+G +LD+
Sbjct: 125 RVGELLGRAKGGEVSEVILALPATVDGQTTAHYLADRLAPTGVSVTMLARGVPVGGDLDW 184
Query: 186 LDDGTIFEAIRSR 198
LDDGTI +A+R+R
Sbjct: 185 LDDGTIAQALRAR 197
>gi|304320340|ref|YP_003853983.1| recombination protein RecR [Parvularcula bermudensis HTCC2503]
gi|303299242|gb|ADM08841.1| recombination protein RecR [Parvularcula bermudensis HTCC2503]
Length = 202
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 144/198 (72%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G EIE L+ I++R+PGFGPRSARR LHL++++E ++ PLAEA+A V C
Sbjct: 1 MSTLPVGPEIEQLLTIISRLPGFGPRSARRIALHLLRRREGVMVPLAEALATAAATVAPC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN D+ PC +C D++RD SV+ VVEDV D+WALERS A YH+LGG +SPLD I
Sbjct: 61 EICGNWDSQSPCRLCEDEERDGSVLCVVEDVGDVWALERSGAFKGRYHILGGLISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ L +R +RE+I A+SAT++GQTTA Y+ D+L+G+ + +TRL++G+P+G
Sbjct: 121 GPDDLNFGPLSQRASAGTVREVILALSATVDGQTTAGYVADRLEGLGLTVTRLSHGVPIG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
EL +LD+GT+ A++SR
Sbjct: 181 GELGHLDEGTLAAALQSR 198
>gi|260432376|ref|ZP_05786347.1| recombination protein RecR [Silicibacter lacuscaerulensis ITI-1157]
gi|260416204|gb|EEX09463.1| recombination protein RecR [Silicibacter lacuscaerulensis ITI-1157]
Length = 197
Score = 214 bits (545), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +I+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+AM + C CGN
Sbjct: 3 SNSDIDALIDLMAKLPGLGPRSARRAVLHLIRKRALLLTPLADAMQQVAATARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC + R + VVEDVADLWA+ER+ YHVLGG+LS LD +GPED+
Sbjct: 63 VGTTDICDICNSEDRATGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDGVGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +R+ + I E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLRDRVTAENITEVILALNATVDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 182 LDDGTITAALRARKEL 197
>gi|254476313|ref|ZP_05089699.1| recombination protein RecR [Ruegeria sp. R11]
gi|214030556|gb|EEB71391.1| recombination protein RecR [Ruegeria sp. R11]
Length = 199
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ + EIENLI ++A++PG GPRSARRA LHL++K+ LL PLA+++ + C
Sbjct: 2 RDTSTSEIENLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLADSITEVAATARECLN 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+ T D C IC D +R + VVEDV+DLWA+ER+ YHVLGG+LS LD +GP
Sbjct: 62 CGNIGTNDICPICEDNERANGELCVVEDVSDLWAMERAGVFKGRYHVLGGTLSALDAVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+D+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G E
Sbjct: 122 DDLRIPRLLDRVPAEAVTEVILALNATIDGQTTAHYIADQLSG-QVRLTSLAQGVPIGGE 180
Query: 183 LDYLDDGTIFEAIRSR 198
LDYLD+GTI A+R+R
Sbjct: 181 LDYLDEGTISAALRAR 196
>gi|89069706|ref|ZP_01157042.1| recombination protein RecR [Oceanicola granulosus HTCC2516]
gi|89044652|gb|EAR50763.1| recombination protein RecR [Oceanicola granulosus HTCC2516]
Length = 197
Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 134/194 (69%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+IE LI ++A++PG GPRSARRA LHL+KK+ LL PLAEAMA + C CGN+
Sbjct: 6 KDIEALIDLMAKLPGLGPRSARRAVLHLIKKRGVLLTPLAEAMARVGANARECLNCGNIG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D C IC +R + VVEDVADLWA+ER+ YHVLGG+LS LD +GP+D+ +
Sbjct: 66 TGDVCDICTSNKRATGQVCVVEDVADLWAMERAAVFGGRYHVLGGTLSALDGVGPDDLRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +RI + + E+I A+ ATI+GQTTAHYI D L G V +T LA G+P+G ELDYLD
Sbjct: 126 PKLKDRIASEHVTEVILALGATIDGQTTAHYIADALDG--VTVTSLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKSL 197
>gi|83855099|ref|ZP_00948629.1| recombination protein RecR [Sulfitobacter sp. NAS-14.1]
gi|83842942|gb|EAP82109.1| recombination protein RecR [Sulfitobacter sp. NAS-14.1]
Length = 197
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGNV
Sbjct: 5 RDIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLTPLADMMQTVAATARECINCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 65 TADICDICTSEKRANGEICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDYLD
Sbjct: 125 PRLLDRVRDEAVSEVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 184 DGTITAAMRAR 194
>gi|163744804|ref|ZP_02152164.1| recombination protein RecR [Oceanibulbus indolifex HEL-45]
gi|161381622|gb|EDQ06031.1| recombination protein RecR [Oceanibulbus indolifex HEL-45]
Length = 197
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++I+ LI+++A++PG GPRSARRA LHL++K+ LL PL++ M + C CGNV
Sbjct: 5 RDIDALIELMAKLPGLGPRSARRAVLHLIRKRALLLTPLSDLMQTVAVTARECLNCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 65 TTDVCDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++RI+ +++ E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDYLD
Sbjct: 125 PRLVDRIDTEEVTEVILALNATIDGQTTAHYIADQLEG-RVRLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+++R L
Sbjct: 184 DGTITAAMQARKSL 197
>gi|83941622|ref|ZP_00954084.1| recombination protein RecR [Sulfitobacter sp. EE-36]
gi|83847442|gb|EAP85317.1| recombination protein RecR [Sulfitobacter sp. EE-36]
Length = 197
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGNV
Sbjct: 5 RDIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLTPLADMMQTVAATARECINCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 65 TADICDICTSEKRANGEICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDYLD
Sbjct: 125 PRLMDRVRDEAVSEVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 184 DGTITAAMRAR 194
>gi|77464285|ref|YP_353789.1| recombination protein RecR [Rhodobacter sphaeroides 2.4.1]
gi|126463127|ref|YP_001044241.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17029]
gi|221640169|ref|YP_002526431.1| recombination protein RecR [Rhodobacter sphaeroides KD131]
gi|332559174|ref|ZP_08413496.1| recombination protein RecR [Rhodobacter sphaeroides WS8N]
gi|123591212|sp|Q3IZZ6|RECR_RHOS4 RecName: Full=Recombination protein recR
gi|166221958|sp|A3PMA3|RECR_RHOS1 RecName: Full=Recombination protein recR
gi|254790780|sp|B9KLQ5|RECR_RHOSK RecName: Full=Recombination protein recR
gi|77388703|gb|ABA79888.1| recombination protein RecR [Rhodobacter sphaeroides 2.4.1]
gi|126104791|gb|ABN77469.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17029]
gi|221160950|gb|ACM01930.1| Recombination protein recR [Rhodobacter sphaeroides KD131]
gi|332276886|gb|EGJ22201.1| recombination protein RecR [Rhodobacter sphaeroides WS8N]
Length = 199
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 136/190 (71%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+IE LI+++AR+PG GPRSARRA L ++KK+ ++ PLA+AMA + C CGN+
Sbjct: 7 DIERLIELMARLPGLGPRSARRAVLLMLKKRGAVMAPLAQAMAEVATSARDCVRCGNITN 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC D++R + VVEDVADLWALER+ A YHVLGG LS LD +GPE++ I
Sbjct: 67 ADLCGICRDERRATGELCVVEDVADLWALERAGAFRGRYHVLGGVLSALDSVGPEELRIP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A++AT++GQTTAHYI D L+ V++T LA G+P+G ELDYLDD
Sbjct: 127 RLAERVREEGISEVILALNATVDGQTTAHYIADVLEPSGVQVTSLAQGVPIGGELDYLDD 186
Query: 189 GTIFEAIRSR 198
GTI A+R+R
Sbjct: 187 GTIGAALRAR 196
>gi|258541158|ref|YP_003186591.1| recombination protein RecR [Acetobacter pasteurianus IFO 3283-01]
gi|256632236|dbj|BAH98211.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-01]
gi|256635293|dbj|BAI01262.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-03]
gi|256638348|dbj|BAI04310.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-07]
gi|256641402|dbj|BAI07357.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-22]
gi|256644457|dbj|BAI10405.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-26]
gi|256647512|dbj|BAI13453.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-32]
gi|256650565|dbj|BAI16499.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653556|dbj|BAI19483.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-12]
Length = 198
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 134/195 (68%), Gaps = 1/195 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G+EIE LI++L R+PGFGPRSARR L+L+K+ + L PLA AM N + CS CG
Sbjct: 1 MGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLAHAMERAGNAIKTCSSCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC IC D RD +I VVE V DLWALER+ +Y VLGG+LSPL IGPED
Sbjct: 61 NLDTIDPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ + L E++ +RE+I A+ AT+EG TT H++MD+L V ++R+A G+PMG L
Sbjct: 121 LDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLAPYGGVTVSRVAQGVPMGGAL 180
Query: 184 DYLDDGTIFEAIRSR 198
D LDDGT+ A+ +R
Sbjct: 181 DVLDDGTLAAALGAR 195
>gi|126731111|ref|ZP_01746919.1| recombination protein RecR [Sagittula stellata E-37]
gi|126708413|gb|EBA07471.1| recombination protein RecR [Sagittula stellata E-37]
Length = 197
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 138/189 (73%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI ++AR+PG GPRSARRA LHL++K+ LL PL+EAM + C CGNV T+
Sbjct: 7 IDTLIGLMARLPGLGPRSARRAVLHLIRKRGPLLQPLSEAMTEVARTARECLNCGNVSTS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D+ R ++ VVEDVADLWA+ER++ YHVLGG+LS LD +GP+++ I
Sbjct: 67 DICPICTDEGRGNGLLCVVEDVADLWAMERAQVFRGRYHVLGGTLSALDGVGPDELRIPR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V ++ LA G+P+G ELDYLDDG
Sbjct: 127 LMDRLGAENVTEVILALNATIDGQTTAHYIADQLEG-RVSVSSLAQGVPIGGELDYLDDG 185
Query: 190 TIFEAIRSR 198
TI A+ +R
Sbjct: 186 TITAALNAR 194
>gi|218507696|ref|ZP_03505574.1| recombination protein RecR [Rhizobium etli Brasil 5]
Length = 146
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 119/146 (81%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAI 146
GP+D+ I+ LI RI IRELI A+
Sbjct: 121 GPDDLNIRGLIHRIGEGGIRELIIAV 146
>gi|329114768|ref|ZP_08243525.1| Recombination protein RecR [Acetobacter pomorum DM001]
gi|326695899|gb|EGE47583.1| Recombination protein RecR [Acetobacter pomorum DM001]
Length = 201
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 134/195 (68%), Gaps = 1/195 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G+EIE LI++L R+PGFGPRSARR L+L+K+ + L PLA AM N + CS CG
Sbjct: 4 MGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLARAMERAGNAIKTCSSCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT +PC IC D RD +I VVE V DLWALER+ +Y VLGG+LSPL IGPED
Sbjct: 64 NLDTINPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIGPED 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ + L E++ +RE+I A+ AT+EG TT H++MD+L V ++R+A G+PMG L
Sbjct: 124 LDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLASYGGVTVSRVAQGVPMGGAL 183
Query: 184 DYLDDGTIFEAIRSR 198
D LDDGT+ A+ +R
Sbjct: 184 DVLDDGTLAAALGAR 198
>gi|310815373|ref|YP_003963337.1| recombination protein RecR [Ketogulonicigenium vulgare Y25]
gi|308754108|gb|ADO42037.1| recombination protein RecR [Ketogulonicigenium vulgare Y25]
Length = 196
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 132/194 (68%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI ++AR+PG GPRSARRA LHLVKK+ QL+ PL AM + C CGN+
Sbjct: 5 SDIARLIALMARVPGLGPRSARRAVLHLVKKRSQLMVPLGNAMQAVAQSARECLNCGNIS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D C IC D R I VVED+ DLWA+ER+ A YHVLGG+LS +D IGPE++ I
Sbjct: 65 THDICPICADTARANGQICVVEDIDDLWAMERTGAFKGRYHVLGGTLSAIDAIGPEELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + I E+I A+ ATI+GQTTAHYI D L GI V + LA G+P+G ELDYLD
Sbjct: 125 PRLVDRVTTENITEVILALGATIDGQTTAHYIADHLSGIIV--STLAQGVPIGGELDYLD 182
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+R+R L
Sbjct: 183 DGTIGAALRARRQL 196
>gi|84685228|ref|ZP_01013127.1| recombination protein RecR [Maritimibacter alkaliphilus HTCC2654]
gi|84666960|gb|EAQ13431.1| recombination protein RecR [Rhodobacterales bacterium HTCC2654]
Length = 198
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++IENLI+++A++PG GPRSARRA LHL++K+ LL PLA+AM + C CGNV
Sbjct: 6 RDIENLIELMAKLPGLGPRSARRAVLHLIRKRGLLLAPLADAMHAVAVSARECITCGNVG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TT+ C IC ++R + VVEDVADLWA+ER+ YHVLGG+LS LD IGP+++ I
Sbjct: 66 TTEVCDICTSEKRATGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+ + I E+I A++AT+ GQTTAHYI ++L+G +T LA G+P+G ELDYLD
Sbjct: 126 PKLVSRVGDENITEVILALNATVNGQTTAHYIAEELEG-RCDVTSLAQGVPIGGELDYLD 184
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 185 DGTITAALRAR 195
>gi|163732697|ref|ZP_02140142.1| recombination protein RecR [Roseobacter litoralis Och 149]
gi|161394057|gb|EDQ18381.1| recombination protein RecR [Roseobacter litoralis Och 149]
Length = 197
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+ + + C CGNV
Sbjct: 5 KDIDALIDLMAKLPGLGPRSARRAVLHLIRKRSLLLIPLADTLQAVAETARECLNCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ I
Sbjct: 65 TTDICDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAVGPQELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + I E+I A++ATI+GQTTAHYI D L+G V++T LA G+P+G ELDYLD
Sbjct: 125 PRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEG-QVRLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 184 DGTITAAMRAR 194
>gi|163795451|ref|ZP_02189418.1| recombination protein RecR [alpha proteobacterium BAL199]
gi|159179437|gb|EDP63968.1| recombination protein RecR [alpha proteobacterium BAL199]
Length = 197
Score = 211 bits (536), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 141/193 (73%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E++ ++ LA++PG GPRSARRA LHL+K+++ L+ PLAEA+A V C+ CGN+DT
Sbjct: 5 ELDRAMQFLAKLPGLGPRSARRAILHLMKRRDSLMLPLAEALAAAARSVRPCTTCGNLDT 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC IC D +RD I VVEDVAD+WALER+ A YHV+GG LS LD IGP D+ +
Sbjct: 65 VDPCGICSDPRRDPQAICVVEDVADVWALERAVAFKGRYHVIGGVLSALDGIGPGDLNVD 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R + E+I A++AT++GQTTAHY+ D+L VK++RLA+G+P+G ELDYLDD
Sbjct: 125 GLVLRAADPAVNEVILAMNATVDGQTTAHYLADRLASTGVKVSRLAHGVPVGGELDYLDD 184
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+R+R L
Sbjct: 185 GTLAQALRARQAL 197
>gi|296533584|ref|ZP_06896152.1| recombination protein R [Roseomonas cervicalis ATCC 49957]
gi|296266092|gb|EFH12149.1| recombination protein R [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 134/190 (70%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++E L+ +LAR+PG G RSARRA L L++ L+ PLA+A+ V C ICGN+DT
Sbjct: 8 QVERLVAMLARLPGLGRRSARRAALKLLQDPGGLMLPLAQALHETAEAVRPCRICGNLDT 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC IC D R+ V+ VVE V+DLWAL+R+ LYHVLGG LS L +GPED+ I
Sbjct: 68 EDPCRICTDPGREQDVVCVVEGVSDLWALQRAHVHRGLYHVLGGVLSALSGVGPEDLRIT 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L+ER+ +IRE+I A+ AT+EG TTAHY+ D+L+ + V +TRLA G+PMG LD +DD
Sbjct: 128 ALLERVAAGEIREVILALPATVEGATTAHYLTDRLRPMGVAVTRLAQGVPMGGALDVMDD 187
Query: 189 GTIFEAIRSR 198
GT+ A+++R
Sbjct: 188 GTLAAALKAR 197
>gi|114767708|ref|ZP_01446397.1| recombination protein RecR [Pelagibaca bermudensis HTCC2601]
gi|114540291|gb|EAU43391.1| recombination protein RecR [Roseovarius sp. HTCC2601]
Length = 197
Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+AM + + C CGNV T
Sbjct: 6 EIDALIDLMAKLPGLGPRSARRAVLHLIRKRALLLQPLADAMQQVASSARECLNCGNVGT 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D +R I VVEDV+DLWA+ERS YHVLGG+LS LD +GPE++ I
Sbjct: 66 AEICPICADARRANGQICVVEDVSDLWAMERSGVFKGRYHVLGGTLSALDNVGPEELRIP 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RI+ + I E+I A++AT++GQTTAHYI D+L+ V++T LA G+P+G ELDYLDD
Sbjct: 126 QLVSRIDGEAISEVILALNATVDGQTTAHYIADQLE-TRVELTSLAQGVPIGGELDYLDD 184
Query: 189 GTIFEAIRSR 198
GTI A+ +R
Sbjct: 185 GTITAALNAR 194
>gi|254510299|ref|ZP_05122366.1| recombination protein RecR [Rhodobacteraceae bacterium KLH11]
gi|221534010|gb|EEE36998.1| recombination protein RecR [Rhodobacteraceae bacterium KLH11]
Length = 197
Score = 210 bits (535), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +I+NLI ++A++PG GPRSARRA LHL++K+ LL PL++AM + C CGN
Sbjct: 3 SNSDIDNLIDLMAKLPGLGPRSARRAVLHLIRKRALLLTPLSDAMQQVAVTARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC + R + VVEDVADLWA+ER+ YHVLGG+LS LD +GP+++
Sbjct: 63 VGTTDICDICNSEARATGELCVVEDVADLWAMERAGIFKGRYHVLGGTLSALDGVGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +R+ + I E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLKDRVVAEGITEVILALNATVDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 182 LDDGTITAALRARKEL 197
>gi|159043201|ref|YP_001531995.1| recombination protein RecR [Dinoroseobacter shibae DFL 12]
gi|189029360|sp|A8LQA8|RECR_DINSH RecName: Full=Recombination protein recR
gi|157910961|gb|ABV92394.1| recombination protein RecR [Dinoroseobacter shibae DFL 12]
Length = 199
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 131/191 (68%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+IE LI ++AR+PG GPRSARRA L L+ K +LL PL EAM + C CGN+
Sbjct: 6 KDIETLIDLMARLPGLGPRSARRAVLFLLGKNRRLLAPLGEAMTAVAQTARDCLNCGNIG 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D C IC ++R I VVEDVADLWA+ER+ YHVLGG+LS LD +GPE++ I
Sbjct: 66 TSDICDICTSEKRATGEICVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAVGPEELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +R + E+I A+ AT++GQTTAHYI + L+G V +T LA G+P+G ELDYLD
Sbjct: 126 PKLRDRAVSEGATEIILALGATVDGQTTAHYIAEALEGTGVAVTSLAQGVPIGGELDYLD 185
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 186 DGTITAALRAR 196
>gi|329849469|ref|ZP_08264315.1| recombination protein RecR [Asticcacaulis biprosthecum C19]
gi|328841380|gb|EGF90950.1| recombination protein RecR [Asticcacaulis biprosthecum C19]
Length = 200
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE L+ +L+++PG GPRSARRA L L+K++EQLL PL AM + +KV C +CG +
Sbjct: 6 GPEIERLMALLSKLPGLGPRSARRAALALLKRREQLLIPLTVAMQDAADKVVTCGVCGAL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T +PCA C D RD ++I VVE+ + LWA+ER A + YHVLGG LS LD + PED+
Sbjct: 66 STRNPCATCSDPARDTTMICVVEEDSALWAMERVGAFSGRYHVLGGLLSALDGVRPEDLR 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSELD 184
+ L+ R+ I E+I A+ AT+EGQTTAHYI D+LKG+ +T LA G+P+G +LD
Sbjct: 126 LDGLVARVREGGIHEIIMALPATVEGQTTAHYIADRLKGLQNQATVTYLARGVPVGGDLD 185
Query: 185 YLDDGTIFEAIRSR 198
+LDDGTI A+++R
Sbjct: 186 WLDDGTIAHALKTR 199
>gi|146276571|ref|YP_001166730.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17025]
gi|166221959|sp|A4WPW1|RECR_RHOS5 RecName: Full=Recombination protein recR
gi|145554812|gb|ABP69425.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17025]
Length = 199
Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+IE LI+++AR+PG GPRSARRA L ++KK+ ++ PLA+AMA + C+ CGN+ +
Sbjct: 7 DIERLIELMARLPGLGPRSARRAVLVMLKKRGAVMAPLAQAMAEVAATARDCARCGNITS 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC D +R + VVEDVADLWALER+ YHVLGG LS LD +GP+++ I
Sbjct: 67 ADLCDICRDDRRATGELCVVEDVADLWALERAGVFRGRYHVLGGVLSALDSVGPDELRIP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A++AT++GQTTAHYI D L+ V++T LA G+P+G ELDYLDD
Sbjct: 127 RLAERVRDEGISEVILALNATVDGQTTAHYIADVLEPSGVQVTSLAQGVPIGGELDYLDD 186
Query: 189 GTIFEAIRSR 198
GTI A+R+R
Sbjct: 187 GTIGAALRAR 196
>gi|110678387|ref|YP_681394.1| recombination protein RecR [Roseobacter denitrificans OCh 114]
gi|122973002|sp|Q16BD5|RECR_ROSDO RecName: Full=Recombination protein recR
gi|109454503|gb|ABG30708.1| recombination protein RecR [Roseobacter denitrificans OCh 114]
Length = 197
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI ++A++PG GPRSARR LHL++K+ LL PLA+ + + C CGNV
Sbjct: 5 KDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ I
Sbjct: 65 TTDVCDICTCEKRANGELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ + I E+I A++ATI+GQTTAHYI D L+G V++T LA G+P+G ELDYLD
Sbjct: 125 PRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEG-QVRLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+R+R
Sbjct: 184 DGTITAAMRAR 194
>gi|83951297|ref|ZP_00960029.1| recombination protein RecR [Roseovarius nubinhibens ISM]
gi|83836303|gb|EAP75600.1| recombination protein RecR [Roseovarius nubinhibens ISM]
Length = 197
Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI ++A++PG GPRSARRA LHL++K+E L PLA+ M + C CGNV
Sbjct: 5 KDIDALIDMMAKLPGLGPRSARRAVLHLIRKREHKLRPLADLMQIVAATARECDRCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC D +R ++ VVEDVADLWA+ER+ A YHVLGG+LS LD++GP+++ I
Sbjct: 65 TTDICDICRDDRRATGLLCVVEDVADLWAMERAGAFKGRYHVLGGTLSALDQVGPDELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+ + I E+I A++AT++GQTTAHYI D+++ V +T LA G+P+G ELDYLD
Sbjct: 125 PGLVARLAEENITEVILALNATVDGQTTAHYIADQIED-RVTLTSLAKGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+ +R
Sbjct: 184 DGTITAALSAR 194
>gi|149916414|ref|ZP_01904933.1| recombination protein RecR [Roseobacter sp. AzwK-3b]
gi|149809684|gb|EDM69538.1| recombination protein RecR [Roseobacter sp. AzwK-3b]
Length = 197
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI+++A++PG GPRSARRA LHL+ K++ L PLA+ M + C CGN
Sbjct: 3 SNRDIDALIEMMAKLPGLGPRSARRAVLHLIAKRDLQLIPLADLMQRVAATARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TT+ C IC ++R I VVEDVADLWA+ER A YHVLGG+LS LD++GPE +
Sbjct: 63 IGTTEICDICAAEKRANGQICVVEDVADLWAMERGHAFKGRYHVLGGTLSALDQVGPEQL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R+ + I E+I A++AT+EGQTTAHYI D+L G V +T LA G+P+G ELDY
Sbjct: 123 RIPQLIDRVTAESITEVILALNATVEGQTTAHYIADQLDG-RVTLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSR 198
LDDGTI A+ +R
Sbjct: 182 LDDGTIGAALAAR 194
>gi|84516009|ref|ZP_01003370.1| recombination protein RecR [Loktanella vestfoldensis SKA53]
gi|84510451|gb|EAQ06907.1| recombination protein RecR [Loktanella vestfoldensis SKA53]
Length = 197
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+++++LI ++A++PG GPRSARRA LH++KK+ +L PLA+A+ + + V C C N+
Sbjct: 6 EDLDHLIAMMAKLPGLGPRSARRAVLHMIKKRNLVLLPLADALQKVGSTVRECLNCANIC 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D C IC+ +R I VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ I
Sbjct: 66 TSDLCDICLSDKRATGQIAVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAVGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+RI + + E+I A+ ATI+G TTAHYI D+L G V +T LA G+P+G ELDYLD
Sbjct: 126 PKLIDRIAAENVTEVIIALGATIDGLTTAHYIADQLPG--VSVTSLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKAL 197
>gi|254463454|ref|ZP_05076870.1| recombination protein RecR [Rhodobacterales bacterium HTCC2083]
gi|206680043|gb|EDZ44530.1| recombination protein RecR [Rhodobacteraceae bacterium HTCC2083]
Length = 197
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 136/191 (71%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI+++A++PG GPRSARRA LHL++K+ LL PLA+++ + C CGNV
Sbjct: 5 KDIDALIEMMAKLPGLGPRSARRAVLHLIRKRSLLLTPLADSLQTVAATARECLNCGNVG 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D C IC +R ++ VVEDV+DLWA+ERS YHVLGG+LS LD IGP+++ I
Sbjct: 65 TADICDICESVKRANGILCVVEDVSDLWAMERSGVFKGRYHVLGGTLSALDAIGPDELRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R+ + I E+I A++ATI+GQTTAHYI D L+ V +T LA G+P+G ELDYLD
Sbjct: 125 PRLIDRVTSEHITEVILALNATIDGQTTAHYIADLLEN-RVTLTSLAQGVPIGGELDYLD 183
Query: 188 DGTIFEAIRSR 198
DGTI A+ +R
Sbjct: 184 DGTITAAMNAR 194
>gi|296116790|ref|ZP_06835396.1| recombination protein RecR [Gluconacetobacter hansenii ATCC 23769]
gi|295976591|gb|EFG83363.1| recombination protein RecR [Gluconacetobacter hansenii ATCC 23769]
Length = 198
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 130/194 (67%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI +L R+PGFGPRSARRA L ++++ + + PLA AM V CS CG
Sbjct: 2 MGGAEIERLITLLGRLPGFGPRSARRAALAMLRQPQTRMLPLAHAMEQAARAVRTCSSCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC+IC D RD ++ VVE+V DLWALER+ +Y VLGG+LS LD +GP+D
Sbjct: 62 NLDTCDPCSICADPARDHGLVCVVENVGDLWALERACVHRGVYQVLGGTLSALDGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + L R+E +RE+I A+ T++G TT H++ D L ++ I+R+ G+P+G LD
Sbjct: 122 LNVAPLYARLEAGGVREVILALGTTVDGATTMHWLHDSLLRFNIPISRVGQGVPVGGALD 181
Query: 185 YLDDGTIFEAIRSR 198
LDDGT+ A+ +R
Sbjct: 182 VLDDGTLAAALMAR 195
>gi|295691233|ref|YP_003594926.1| recombination protein RecR [Caulobacter segnis ATCC 21756]
gi|295433136|gb|ADG12308.1| recombination protein RecR [Caulobacter segnis ATCC 21756]
Length = 200
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 137/192 (71%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G EIE LI +L+++PG GPRS RRA L L+KK++ LL PLA AMA KV CS CG++
Sbjct: 6 GPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLALAMAEAQAKVRTCSTCGSL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D TDPCA+C D RD ++ VVE+V +WA+ER + YHVLGG LS LD +GPE +
Sbjct: 66 DVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHVLGGLLSALDGVGPEALR 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L+ R+ ++ E+I A+ AT++GQTTAHYI D+L +V +T LA G+P+G +LD+L
Sbjct: 126 IGELVARVGGGEVAEVILALPATVDGQTTAHYIADRLAQTNVPVTMLARGVPVGGDLDWL 185
Query: 187 DDGTIFEAIRSR 198
DDGTI +A+R+R
Sbjct: 186 DDGTIAQALRAR 197
>gi|85703836|ref|ZP_01034939.1| recombination protein RecR [Roseovarius sp. 217]
gi|85671156|gb|EAQ26014.1| recombination protein RecR [Roseovarius sp. 217]
Length = 205
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+EI+ LI ++AR+PG GPRSARRA LH+++K+ LL PLA M + + C+ CGN+
Sbjct: 13 REIDALIDMMARLPGLGPRSARRAVLHMIRKRALLLAPLARLMQIVADTARECATCGNIG 72
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TT+ C IC +R I VVEDVADLWA+ER +A YHVLGG+LS LD++GPE + I
Sbjct: 73 TTEICDICASAKRANGQICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDQVGPEVLRI 132
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+E + I E+I A++AT++GQTTAHYI D+L G V +T LA G+P+G ELDYLD
Sbjct: 133 PDLVARVESEAITEVILALNATVDGQTTAHYIADQLDG-KVTLTSLAQGVPIGGELDYLD 191
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 192 DGTISAALSARKRL 205
>gi|42520978|ref|NP_966893.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|59798344|sp|Q73FZ1|RECR_WOLPM RecName: Full=Recombination protein recR
gi|42410719|gb|AAS14827.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 201
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 136/189 (71%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ IGP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLDT 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+++R+ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G
Sbjct: 125 ILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSR 198
T+ A+ SR
Sbjct: 185 TLRIALTSR 193
>gi|73666876|ref|YP_302892.1| RecR protein [Ehrlichia canis str. Jake]
gi|123615050|sp|Q3YSL1|RECR_EHRCJ RecName: Full=Recombination protein recR
gi|72394017|gb|AAZ68294.1| RecR protein [Ehrlichia canis str. Jake]
Length = 195
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 134/193 (69%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P FGP S+RR LHL++ KE+++ PLA + ++ + CS+C N+D
Sbjct: 2 DINKLINMFAKLPNFGPSSSRRIVLHLLRNKEEVMLPLASGIQDLAFQTKECSVCFNIDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + +
Sbjct: 62 KSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++ERI+ I+E+I I T++GQ T HYI +KG+ +KITRLA GIPMG E+DYLD+
Sbjct: 122 NIVERIKKFDIKEVIIGIGNTMDGQVTTHYITQIVKGLGIKITRLACGIPMGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLSAALSSRYVI 194
>gi|262277953|ref|ZP_06055746.1| recombination protein RecR [alpha proteobacterium HIMB114]
gi|262225056|gb|EEY75515.1| recombination protein RecR [alpha proteobacterium HIMB114]
Length = 205
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 137/201 (68%), Gaps = 7/201 (3%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K T ++NLI +++R+PG GP+SARR LHL K KE L+ PLA+ + + K+ C IC
Sbjct: 2 KFTEPVLDNLISLISRLPGLGPKSARRIALHLFKNKENLMKPLADTLGIAHEKILRCKIC 61
Query: 64 GNVDTTDP-CAIC----IDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
G + + D C I ID D + +VE++AD+WA+E + YH+LGG+LS L+
Sbjct: 62 GAIKSVDANCTISKCEYIDNSYDQ--LCIVENIADMWAMEATNIYKGHYHILGGTLSALN 119
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
PE + I SLI+R++ ++E+I A SATIEGQTTAHYI D LK +++KIT+LA+G+P
Sbjct: 120 GSDPESLLIGSLIDRVKKNNVKEVIIATSATIEGQTTAHYINDSLKNLNIKITKLAHGLP 179
Query: 179 MGSELDYLDDGTIFEAIRSRT 199
+GSE++YLDDGT+F A + R
Sbjct: 180 VGSEIEYLDDGTLFSAFKYRN 200
>gi|58696821|ref|ZP_00372348.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698616|ref|ZP_00373512.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630849|ref|YP_002727640.1| recombination protein RecR [Wolbachia sp. wRi]
gi|58534861|gb|EAL58964.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536979|gb|EAL60136.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592830|gb|ACN95849.1| recombination protein RecR [Wolbachia sp. wRi]
Length = 201
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 136/189 (71%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ IGP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLDT 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+++++ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G
Sbjct: 125 ILKKVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSR 198
T+ A+ SR
Sbjct: 185 TLRIALTSR 193
>gi|255002981|ref|ZP_05277945.1| recombination protein RecR [Anaplasma marginale str. Puerto Rico]
gi|255004107|ref|ZP_05278908.1| recombination protein RecR [Anaplasma marginale str. Virginia]
gi|269958950|ref|YP_003328739.1| recombination protein RecR [Anaplasma centrale str. Israel]
gi|172045888|sp|Q5PB75|RECR_ANAMM RecName: Full=Recombination protein recR
gi|269848781|gb|ACZ49425.1| recombination protein RecR [Anaplasma centrale str. Israel]
Length = 195
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 131/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT
Sbjct: 2 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ +
Sbjct: 62 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+
Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLRAALSSRYVI 194
>gi|56416635|ref|YP_153709.1| recombination protein [Anaplasma marginale str. St. Maries]
gi|56387867|gb|AAV86454.1| recombination protein [Anaplasma marginale str. St. Maries]
Length = 213
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 131/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT
Sbjct: 20 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 79
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ +
Sbjct: 80 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 139
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+
Sbjct: 140 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 199
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 200 GTLRAALSSRYVI 212
>gi|99036083|ref|ZP_01315117.1| hypothetical protein Wendoof_01000036 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 197
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 135/189 (71%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ GP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGTGPKELNLDT 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+++R+ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G
Sbjct: 125 ILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSR 198
T+ A+ SR
Sbjct: 185 TLRIALTSR 193
>gi|254994847|ref|ZP_05277037.1| recombination protein RecR [Anaplasma marginale str. Mississippi]
Length = 227
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 131/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT
Sbjct: 2 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ +
Sbjct: 62 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+
Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLRAALSSRYVI 194
>gi|58585003|ref|YP_198576.1| recombinational DNA repair protein RecR [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|73621530|sp|Q5GRP0|RECR_WOLTR RecName: Full=Recombination protein recR
gi|58419319|gb|AAW71334.1| Recombinational DNA repair protein RecR [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 201
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 134/189 (70%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA ++ + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASSIKELADLIIECKVCGNLDTQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + +YHVLGG LS ++ IGPE + + +
Sbjct: 65 SPCSICTNPKRDTKLMCVVEELGDLWAFEKGSIYSGMYHVLGGRLSAINGIGPEKLNLDN 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+ +R+ KI E+I AI+ T+EGQ T YI++ LK +DVK++RLA GIPMG E+DYLD+G
Sbjct: 125 IPKRVTEFKIEEVIIAINPTLEGQVTVQYIIESLKNLDVKVSRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSR 198
T+ A+ SR
Sbjct: 185 TLKAALTSR 193
>gi|162149234|ref|YP_001603695.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5]
gi|209545028|ref|YP_002277257.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5]
gi|161787811|emb|CAP57409.1| putative recombination protein recR [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532705|gb|ACI52642.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5]
Length = 197
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 133/194 (68%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G +IE LI +LAR+PG GPRSARRA L L+++ + + PLA+AM V CS CG
Sbjct: 1 MGGTDIERLIALLARLPGLGPRSARRAALALLRQPQARMLPLAQAMEQAARSVRTCSSCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC IC D RD ++ VVE V DLWALER+ +Y VLGG+LS L +GP+D
Sbjct: 61 NLDTHDPCTICADPGRDRGLVCVVETVGDLWALERAGVHRGVYQVLGGTLSALAGMGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + SL+ RIE +RE+I A+ AT++G TTAH++ D+L DV ++R+ G+PMG LD
Sbjct: 121 LNVASLLARIEQGGVREIILALGATVDGATTAHWLQDRLAAFDVPVSRVGQGVPMGGALD 180
Query: 185 YLDDGTIFEAIRSR 198
LDDGT+ A+ +R
Sbjct: 181 VLDDGTLAAALMAR 194
>gi|330813513|ref|YP_004357752.1| recombination protein RecR [Candidatus Pelagibacter sp. IMCC9063]
gi|327486608|gb|AEA81013.1| recombination protein RecR [Candidatus Pelagibacter sp. IMCC9063]
Length = 206
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 141/199 (70%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +++ LI +++++PG GP+S+RR L+L+K +E ++ PL++++ ++ K+ C++CGN
Sbjct: 5 TEPDLDELIALVSKLPGLGPKSSRRIALYLLKNRENVMKPLSKSLEKVHAKIIRCNLCGN 64
Query: 66 VDTTD-PCAI--CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
+ + + C I C ++ I VVE++AD+WA+E + YH+LGG+LS L P
Sbjct: 65 IKSKEVKCDIKKCSYSPKNYEQICVVENIADMWAMESTNVFQGHYHILGGTLSALGNSSP 124
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
ED+ I SL+ RI+ KI+E+I A SATIEGQTTAHYI D +K + VK+T+LA+G+P+G E
Sbjct: 125 EDLLINSLLNRIKENKIKEVILATSATIEGQTTAHYINDSIKDLGVKVTKLAHGLPVGGE 184
Query: 183 LDYLDDGTIFEAIRSRTVL 201
++YLDDGT+F A + R+ L
Sbjct: 185 IEYLDDGTLFSAFKFRSSL 203
>gi|58039072|ref|YP_191036.1| recombination protein RecR [Gluconobacter oxydans 621H]
gi|73621489|sp|Q5FTB6|RECR_GLUOX RecName: Full=Recombination protein recR
gi|58001486|gb|AAW60380.1| Recombination protein RecR [Gluconobacter oxydans 621H]
Length = 198
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 133/193 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I+ LI +LAR+PG GPRSARRA L L+++ E + PLA M +V CS+CGN+DT
Sbjct: 6 DIDQLITMLARLPGLGPRSARRAALALLRQPESRMLPLAHLMERAATRVKTCSLCGNLDT 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC IC D RD +I VVE V DLWALER+ +Y VLGG+LS L +GP+D+ ++
Sbjct: 66 VDPCHICTDAGRDRGLICVVETVGDLWALERAGVHRGVYQVLGGTLSALAGLGPDDLNVR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ERIE +RE+I A+SAT+EG TTAH++ ++L V +TR+ +G+PMG LD LDD
Sbjct: 126 PLFERIEEGGVREVILALSATVEGATTAHWLQERLLPTGVTVTRVGHGVPMGGALDVLDD 185
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ +R L
Sbjct: 186 GTLAAALTARRSL 198
>gi|88658065|ref|YP_507639.1| recombination protein RecR [Ehrlichia chaffeensis str. Arkansas]
gi|123492997|sp|Q2GFZ4|RECR_EHRCR RecName: Full=Recombination protein recR
gi|88599522|gb|ABD44991.1| recombination protein RecR [Ehrlichia chaffeensis str. Arkansas]
Length = 195
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 132/193 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P FGP S+RR LHL++ KE+++ PLA + ++ + C +C N+D
Sbjct: 2 DINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNIDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + +
Sbjct: 62 KSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
S++ERI+ ++E+I I T++GQ T HYI +K + +K+TRLA GIPMG E+DYLD+
Sbjct: 122 SIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELGIKVTRLACGIPMGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR ++
Sbjct: 182 GTLSAALSSRYII 194
>gi|88607618|ref|YP_505551.1| recombination protein RecR [Anaplasma phagocytophilum HZ]
gi|123494636|sp|Q2GJA0|RECR_ANAPZ RecName: Full=Recombination protein recR
gi|88598681|gb|ABD44151.1| recombination protein RecR [Anaplasma phagocytophilum HZ]
Length = 194
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 128/193 (66%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + +++PG GP S+RR LHL++ + ++ PLA + + C IC N+D
Sbjct: 2 DISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
T PC+IC D +RD S++ +VE++ DLWA E+ + +YHVLGG LS L +GPED+ +
Sbjct: 62 TSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNMS 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
S+ ER+ + ++E+I A + ++GQ T HYI +K VK+TRLA GIP+G E+DYLD+
Sbjct: 122 SIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTGVKVTRLACGIPLGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR ++
Sbjct: 182 GTLRAALSSRYII 194
>gi|326388513|ref|ZP_08210107.1| recombination protein RecR [Novosphingobium nitrogenifigens DSM
19370]
gi|326206978|gb|EGD57801.1| recombination protein RecR [Novosphingobium nitrogenifigens DSM
19370]
Length = 171
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 124/166 (74%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
L L+K++E L L +A+A + +++ C CGNVDTT PC IC D +RDA + VVEDV+
Sbjct: 2 LWLIKRRETALTGLVDALATVRDRLVECPTCGNVDTTSPCGICTDTRRDARSLCVVEDVS 61
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
DLWAL+R++ YHVLGG LS LD + PED+ I LI+R+ I E++ A++AT+EG
Sbjct: 62 DLWALDRARLFTGRYHVLGGRLSALDGVRPEDLNIARLIDRVAGGGIDEVVLAMNATLEG 121
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
QTTAHY+ ++L+G V+IT+LA+G+P+G ELDYLD+GT+ +A+R+R
Sbjct: 122 QTTAHYLAERLEGYPVRITQLAHGLPVGGELDYLDEGTLAQALRAR 167
>gi|190571171|ref|YP_001975529.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357443|emb|CAQ54877.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 197
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 134/190 (70%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C ICGN+DT
Sbjct: 4 NIKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGNLDT 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC + +RD ++ VVE++ DLWA E+ + +YHVLGG LS ++ IGP+++ +
Sbjct: 64 KSPCSICTNPKRDTKLMCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLD 123
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
++ +R+ KI E+I AI+ T+EGQ TA YI++ LK +VKI+RLA GIP+G E+DYLD+
Sbjct: 124 NIPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDYLDE 183
Query: 189 GTIFEAIRSR 198
GT+ A+ SR
Sbjct: 184 GTLKIALTSR 193
>gi|88608709|ref|YP_506765.1| recombination protein RecR [Neorickettsia sennetsu str. Miyayama]
gi|123491366|sp|Q2GCN1|RECR_NEOSM RecName: Full=Recombination protein recR
gi|88600878|gb|ABD46346.1| recombination protein RecR [Neorickettsia sennetsu str. Miyayama]
Length = 196
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 131/191 (68%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LIK+ +PG GP+SARR LHL+K +E L + M +Y + C +CGN++
Sbjct: 3 KKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGNLE 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ PC+IC +R + ++ VVE++ DLWA+E++ N YHVL G+LS +D I PE + I
Sbjct: 63 SESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETLQI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L R+ ++ELI A +AT+EGQTTA YI++ LKG VK++ LA+GIP+GSE+DYLD
Sbjct: 123 EKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGTQVKLSFLAHGIPVGSEMDYLD 182
Query: 188 DGTIFEAIRSR 198
+GT+ A +R
Sbjct: 183 EGTLGIAFANR 193
>gi|330993790|ref|ZP_08317722.1| Recombination protein recR [Gluconacetobacter sp. SXCC-1]
gi|329759058|gb|EGG75570.1| Recombination protein recR [Gluconacetobacter sp. SXCC-1]
Length = 198
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 130/190 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI+ L+ +L R+PG GPRSARRA L L+++ + PLA+AM V CS CGN+DT
Sbjct: 6 EIDRLVTLLGRLPGLGPRSARRAALALLRQPHARMLPLAQAMEQAARAVRTCSRCGNLDT 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TDPC IC D RD ++ VVE+V DLWALER+ +Y VLGG+LS L +GP+D+ +Q
Sbjct: 66 TDPCGICTDPARDDGLVCVVENVGDLWALERAGVHRGVYQVLGGTLSALSGVGPDDLNVQ 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++RI +RE+I A+ T+EG TT H++ ++L DV+++R+ G+P+G LD LDD
Sbjct: 126 PLLDRIAAGGVREVILALGTTVEGATTMHWLHERLARFDVQVSRVGQGVPVGGALDVLDD 185
Query: 189 GTIFEAIRSR 198
GT+ AI +R
Sbjct: 186 GTLAAAIMAR 195
>gi|57238988|ref|YP_180124.1| recombination protein RecR [Ehrlichia ruminantium str. Welgevonden]
gi|58578924|ref|YP_197136.1| recombination protein RecR [Ehrlichia ruminantium str. Welgevonden]
gi|58616983|ref|YP_196182.1| recombination protein RecR [Ehrlichia ruminantium str. Gardel]
gi|57161067|emb|CAH57974.1| putative recombination protein RecR [Ehrlichia ruminantium str.
Welgevonden]
gi|58416595|emb|CAI27708.1| Recombination protein RecR [Ehrlichia ruminantium str. Gardel]
gi|58417550|emb|CAI26754.1| Recombination protein RecR [Ehrlichia ruminantium str. Welgevonden]
Length = 195
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 130/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P G S+RR L+L++ +E+++ PLA ++ + K CSIC N+D
Sbjct: 2 DINKLINMFAKLPNLGSSSSRRIVLYLLRNREEIMLPLASSIQELALKTKECSICFNIDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ +
Sbjct: 62 KSPCSICSDVKRDQKLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNFN 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
++I RI+ ++E+I IS T++GQ T HYI +K + VK+TRLA GIPMG E+DYLD+
Sbjct: 122 NIIARIQNSGVQEVIIGISNTMDGQVTTHYITQMIKKLGVKVTRLACGIPMGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLSAALSSRYVI 194
>gi|167041264|gb|ABZ06020.1| putative Toprim domain protein [uncultured marine microorganism
HF4000_005D21]
gi|167045769|gb|ABZ10415.1| putative Toprim domain protein [uncultured marine bacterium
HF4000_APKG3108]
Length = 201
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 128/191 (67%), Gaps = 2/191 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
KEIE LIKI+A++PG GP+SA+R L L+ +E+L PL +A +Y V C +CGN+
Sbjct: 7 KEIEELIKIIAKLPGLGPKSAKRIVLKLINNREELAKPLVNTLAQVYKNVIRCKVCGNLK 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ + C ++ D I VVE++AD+W ++ S YH+LGG+L L+ + + +
Sbjct: 67 SANSNCTCSNKNYDQ--ICVVENIADMWVIQSSGIYKGHYHILGGTLPSLESKKDDGLLV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LD
Sbjct: 125 SSLVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGVPVGGEIEFLD 184
Query: 188 DGTIFEAIRSR 198
DGT+F A ++R
Sbjct: 185 DGTLFSAFKNR 195
>gi|114326923|ref|YP_744080.1| recombination protein RecR [Granulibacter bethesdensis CGDNIH1]
gi|122328092|sp|Q0BVJ5|RECR_GRABC RecName: Full=Recombination protein recR
gi|114315097|gb|ABI61157.1| recombination protein recR [Granulibacter bethesdensis CGDNIH1]
Length = 202
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 129/192 (67%), Gaps = 5/192 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G E+E LI +LAR+PG GPRSARRA L L+++ E L PLA AM N V C +CG
Sbjct: 1 MGGPELEQLIALLARLPGLGPRSARRAALRLLQQPETRLLPLAAAMQNAARAVKTCRVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+D+ DPC++C D R+ +I VVE V DLWA++R+ LYHVLGG LS L GP+
Sbjct: 61 NLDSADPCSVCTDPSRENGLICVVESVGDLWAMDRAGIYRGLYHVLGGVLSALAGTGPDA 120
Query: 125 IGIQSLIERIEVKK-----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+ +L+ RIE + + E+I A+ AT++G TTAH++ ++L+ + V +TRLA GIP+
Sbjct: 121 LNWPALMRRIESSRPSATPVTEVILALGATVDGATTAHWLAEQLRPMGVSVTRLAQGIPI 180
Query: 180 GSELDYLDDGTI 191
G LD LDDGT+
Sbjct: 181 GGALDVLDDGTL 192
>gi|297182625|gb|ADI18783.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11
cluster bacterium HF4000_37C10]
Length = 201
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 128/191 (67%), Gaps = 2/191 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
KEIE LIKI++++PG GP+SA+R L L+ +++L PL +A +Y V C +CGN+
Sbjct: 7 KEIEELIKIISKLPGLGPKSAKRIVLKLINNRDELAKPLVNTLAQVYKNVIRCKVCGNLK 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ + C ++ D I VVE++AD+W ++ S YH+LGG+L L+ + + +
Sbjct: 67 SANSNCTCSNKNYDQ--ICVVENIADMWVIQSSGIYKGHYHILGGTLPSLESKKDDGLLV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LD
Sbjct: 125 SSLVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGLPVGGEIEFLD 184
Query: 188 DGTIFEAIRSR 198
DGT+F A ++R
Sbjct: 185 DGTLFSAFKNR 195
>gi|310639623|ref|YP_003944381.1| recombination protein recr [Paenibacillus polymyxa SC2]
gi|309244573|gb|ADO54140.1| Recombination protein RecR [Paenibacillus polymyxa SC2]
Length = 199
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 130/192 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A R H++K KE + A+A+ N+ + CS+CGN+ T
Sbjct: 7 IAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RDASVI VV+D DL A+ER+K LYHVL G++SP++ IGPEDI ++
Sbjct: 67 DPCRICQDKTRDASVICVVQDAKDLVAMERTKEFEGLYHVLHGAISPMEGIGPEDIKLKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A + IEG+ TA YI ++ ++K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLTRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|297183474|gb|ADI19605.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11
cluster bacterium HF0770_37D02]
Length = 201
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE+LIK+++++PG GP+SA+R L L+ +E+L+ PLA +A +Y V C+ICGN+ +
Sbjct: 9 IEDLIKLISKLPGLGPKSAKRIVLKLINNREELIKPLANTLAQVYKNVVRCTICGNLKSV 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
A C ++ I VVE++AD+W ++ S YH+LGG+L L+ + + + S
Sbjct: 69 S--ANCTCSNKNYKQICVVENIADMWVIQSSGIYKGHYHILGGTLPALESKKDDGLLVSS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LDDG
Sbjct: 127 LVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGLPVGGEIEFLDDG 186
Query: 190 TIFEAIRSR 198
T+F A ++R
Sbjct: 187 TLFSAFKNR 195
>gi|308066976|ref|YP_003868581.1| Recombination protein recR [Paenibacillus polymyxa E681]
gi|305856255|gb|ADM68043.1| Recombination protein recR [Paenibacillus polymyxa E681]
Length = 199
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 129/192 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A R H++K KE + A+A+ N+ + CS+CGN+ T
Sbjct: 7 IAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD SVI VV+D DL A+ER+K N YHVL G++SP++ IGPEDI ++
Sbjct: 67 DPCRICQDKTRDTSVICVVQDSKDLVAMERTKEFNGFYHVLHGAISPMEGIGPEDIKLKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A + IEG+ TA YI ++ ++K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLNRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|254797228|ref|YP_003082069.1| recombination protein RecR [Neorickettsia risticii str. Illinois]
gi|254590472|gb|ACT69834.1| recombination protein RecR [Neorickettsia risticii str. Illinois]
Length = 196
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 130/191 (68%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI + +PG GP+SARR LHL+K KE L + M ++ + C +CGN++
Sbjct: 3 KKIKALINLAESLPGLGPKSARRIVLHLLKSKETTLMRFIDTMQVLFETIKHCELCGNLE 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ PC+IC +R + ++ VVE++ DLWA+E++ + YHVL G+LS ++ I PE + I
Sbjct: 63 SESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHSGRYHVLNGALSIVNGITPETLQI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L R+ ++ELI A +AT+EGQTTA YI++ LKG VK++ LA+GIP+GSE+DYLD
Sbjct: 123 EKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGAQVKLSFLAHGIPVGSEMDYLD 182
Query: 188 DGTIFEAIRSR 198
+GT+ A +R
Sbjct: 183 EGTLGIAFANR 193
>gi|148260990|ref|YP_001235117.1| recombination protein RecR [Acidiphilium cryptum JF-5]
gi|172047773|sp|A5G016|RECR_ACICJ RecName: Full=Recombination protein recR
gi|146402671|gb|ABQ31198.1| recombination protein RecR [Acidiphilium cryptum JF-5]
Length = 196
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 124/186 (66%), Gaps = 2/186 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+ ++AR+PG GPRSARR L L+ ++EQ L PL A+ +V +C +CG
Sbjct: 1 MMGPEIERLVGLMARLPGLGPRSARRIVLRLMAEREQRLLPLIAALDAACQRVAVCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+D+ PC IC D R+ +I VVE VAD WALER+ YHVLGG LS + GPED
Sbjct: 61 GLDSQQPCMICADAARE-PLICVVETVADQWALERAAVYRGRYHVLGGLLSAIAGHGPED 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ R++ +RE+I A+ AT++GQ TAHY+ ++L V +TRLA G+P+G ++
Sbjct: 120 LGIDRLVARLD-GSVREVILALPATVDGQATAHYLTERLATCGVSVTRLAQGVPVGGSIE 178
Query: 185 YLDDGT 190
LD+GT
Sbjct: 179 ILDEGT 184
>gi|326404390|ref|YP_004284472.1| recombination protein RecR [Acidiphilium multivorum AIU301]
gi|325051252|dbj|BAJ81590.1| recombination protein RecR [Acidiphilium multivorum AIU301]
Length = 196
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+ ++AR+PG GPRSARR L L+ ++EQ L PL A+ +V +C CG
Sbjct: 1 MMGPEIERLVGLMARLPGLGPRSARRIVLRLMAEREQRLLPLIAALDAACQRVAVCPTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+D+ PC IC D R+ +I VVE VAD WALER+ YHVLGG LS + GPED
Sbjct: 61 GLDSQQPCMICADAARE-PLICVVETVADQWALERAAVYRGRYHVLGGLLSAIAGHGPED 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ R++ +RE+I A+ AT++GQ TAHY+ ++L V +TRLA G+P+G ++
Sbjct: 120 LGIDRLVARLD-GSVREVILALPATVDGQATAHYLTERLATCGVSVTRLAQGVPVGGSIE 178
Query: 185 YLDDGT 190
LD+GT
Sbjct: 179 ILDEGT 184
>gi|172047911|sp|A8GNG2|RECR_RICAH RecName: Full=Recombination protein recR
Length = 201
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 2 NKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT C+IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 62 CGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G E
Sbjct: 122 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGE 181
Query: 183 LDYLDDGTIFEAIRSR 198
LDYLD+GT+ AI R
Sbjct: 182 LDYLDEGTLSAAINLR 197
>gi|254456022|ref|ZP_05069451.1| recombination protein RecR [Candidatus Pelagibacter sp. HTCC7211]
gi|207083024|gb|EDZ60450.1| recombination protein RecR [Candidatus Pelagibacter sp. HTCC7211]
Length = 203
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 129/195 (66%), Gaps = 2/195 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
EIE LIK+++++PG GP+SA+R L L+ +++L+ PLA + +Y V C+ CG++
Sbjct: 5 NEIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPLASTLDQVYKNVTRCNFCGSLK 64
Query: 68 TT-DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C + + + I VVED+AD W++E S +H+LGG++S + + ED+
Sbjct: 65 SNLSGCINCENSKEKYNKICVVEDIADQWSIENSNIFQGYFHILGGTISSVGQ-RKEDLL 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I SL+ER+ + I E+I A SAT+EGQTTA+YI D LK K+T+LA G+P+G E++ L
Sbjct: 124 INSLVERVNKEGIEEVILATSATVEGQTTAYYIQDSLKNTSAKVTKLAQGLPVGGEIENL 183
Query: 187 DDGTIFEAIRSRTVL 201
DDGT+F A ++R L
Sbjct: 184 DDGTLFSAFKNRANL 198
>gi|157825725|ref|YP_001493445.1| recombination protein RecR [Rickettsia akari str. Hartford]
gi|157799683|gb|ABV74937.1| recombination protein RecR [Rickettsia akari str. Hartford]
Length = 207
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 8 NKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKI 67
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT C+IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 68 CGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNP 127
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G E
Sbjct: 128 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGE 187
Query: 183 LDYLDDGTIFEAIRSR 198
LDYLD+GT+ AI R
Sbjct: 188 LDYLDEGTLSAAINLR 203
>gi|67459064|ref|YP_246688.1| recombination protein RecR [Rickettsia felis URRWXCal2]
gi|67004597|gb|AAY61523.1| Recombination protein RecR [Rickettsia felis URRWXCal2]
Length = 207
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 126/196 (64%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 8 NKTNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCEI 67
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT + C IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 68 CGNMDTENICCICSSEYRDKSVIAVVETVAELWAMERSSNFKGLYHVLGHNLSAASRQNP 127
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + L+ KI+RLA GIP+G E
Sbjct: 128 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLREHPAKISRLASGIPIGGE 187
Query: 183 LDYLDDGTIFEAIRSR 198
LDYLD+GT+ AI R
Sbjct: 188 LDYLDEGTLSAAINLR 203
>gi|73621511|sp|Q4ULQ0|RECR_RICFE RecName: Full=Recombination protein recR
Length = 201
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 126/196 (64%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 2 NKTNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCEI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT + C IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 62 CGNMDTENICCICSSEYRDKSVIAVVETVAELWAMERSSNFKGLYHVLGHNLSAASRQNP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + L+ KI+RLA GIP+G E
Sbjct: 122 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLREHPAKISRLASGIPIGGE 181
Query: 183 LDYLDDGTIFEAIRSR 198
LDYLD+GT+ AI R
Sbjct: 182 LDYLDEGTLSAAINLR 197
>gi|91206053|ref|YP_538408.1| recombination protein RecR [Rickettsia bellii RML369-C]
gi|157826581|ref|YP_001495645.1| recombination protein RecR [Rickettsia bellii OSU 85-389]
gi|122425241|sp|Q1RH45|RECR_RICBR RecName: Full=Recombination protein recR
gi|172047817|sp|A8GUU1|RECR_RICB8 RecName: Full=Recombination protein recR
gi|91069597|gb|ABE05319.1| Recombination protein RecR [Rickettsia bellii RML369-C]
gi|157801885|gb|ABV78608.1| recombination protein RecR [Rickettsia bellii OSU 85-389]
Length = 200
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 125/193 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C +CGN
Sbjct: 4 NNNEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKTLINNLTEIDKKIVKCQVCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT + C IC + RD SVI +VE VA+LWA+ERS LYHVLG +LS R P +
Sbjct: 64 MDTENICGICTSEYRDKSVIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSIL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDY
Sbjct: 124 RLPELLDRCFKENIKEVIIATNSTLEGQTTAYFITEYLKDHPAKISRLASGIPIGGELDY 183
Query: 186 LDDGTIFEAIRSR 198
LD+GT+ AI R
Sbjct: 184 LDEGTLSAAINLR 196
>gi|224475613|ref|YP_002633219.1| recombination protein RecR [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254790783|sp|B9DLF7|RECR_STACT RecName: Full=Recombination protein recR
gi|222420220|emb|CAL27034.1| putative recombination protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 198
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL G++SP+D IGPEDI I S
Sbjct: 67 DPCYICNDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGAISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIERLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ AI RT
Sbjct: 187 TLSRAIEGRT 196
>gi|289551724|ref|YP_003472628.1| Recombination protein RecR [Staphylococcus lugdunensis HKU09-01]
gi|315660108|ref|ZP_07912966.1| recombination protein R [Staphylococcus lugdunensis M23590]
gi|289181255|gb|ADC88500.1| Recombination protein RecR [Staphylococcus lugdunensis HKU09-01]
gi|315495009|gb|EFU83346.1| recombination protein R [Staphylococcus lugdunensis M23590]
Length = 198
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLNMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD +VI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I S
Sbjct: 67 DPCYICEDKQRDRTVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIERLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|15923470|ref|NP_371004.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
Mu50]
gi|156978808|ref|YP_001441067.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
Mu3]
gi|255005273|ref|ZP_05143874.2| recombination protein RecR [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|20139575|sp|Q932G3|RECR_STAAM RecName: Full=Recombination protein recR
gi|166221970|sp|A7WYM0|RECR_STAA1 RecName: Full=Recombination protein recR
gi|14246248|dbj|BAB56642.1| recombination protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156720943|dbj|BAF77360.1| recombination protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 198
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I S
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIERLKSDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAITGRT 196
>gi|49482705|ref|YP_039929.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282903063|ref|ZP_06310956.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C160]
gi|282907452|ref|ZP_06315300.1| recombination protein recR [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907800|ref|ZP_06315640.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283959908|ref|ZP_06377349.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295427011|ref|ZP_06819650.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297588777|ref|ZP_06947418.1| recombination protein R [Staphylococcus aureus subsp. aureus MN8]
gi|56749587|sp|Q6GJJ3|RECR_STAAR RecName: Full=Recombination protein recR
gi|49240834|emb|CAG39501.1| putative recombination protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282328364|gb|EFB58637.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330351|gb|EFB59872.1| recombination protein recR [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282597522|gb|EFC02481.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C160]
gi|283789500|gb|EFC28327.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295129463|gb|EFG59090.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297577288|gb|EFH96001.1| recombination protein R [Staphylococcus aureus subsp. aureus MN8]
gi|315193218|gb|EFU23617.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
CGS00]
Length = 198
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLINSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I S
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|15926157|ref|NP_373690.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
N315]
gi|148266938|ref|YP_001245881.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
JH9]
gi|150392984|ref|YP_001315659.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
JH1]
gi|253315724|ref|ZP_04838937.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|257795399|ref|ZP_05644378.1| recombination protein RecR [Staphylococcus aureus A9781]
gi|258413425|ref|ZP_05681700.1| recombination protein RecR [Staphylococcus aureus A9763]
gi|258421453|ref|ZP_05684380.1| recombination protein RecR [Staphylococcus aureus A9719]
gi|258436848|ref|ZP_05689188.1| recombination protein recR [Staphylococcus aureus A9299]
gi|258444433|ref|ZP_05692767.1| recombination protein recR [Staphylococcus aureus A8115]
gi|258445645|ref|ZP_05693825.1| recombination protein recR [Staphylococcus aureus A6300]
gi|258448177|ref|ZP_05696306.1| recombination protein recR [Staphylococcus aureus A6224]
gi|258456011|ref|ZP_05703966.1| recombination protein recR [Staphylococcus aureus A5937]
gi|269202099|ref|YP_003281368.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ED98]
gi|282893619|ref|ZP_06301852.1| recombination protein RecR [Staphylococcus aureus A8117]
gi|282927513|ref|ZP_06335131.1| recombination protein RecR [Staphylococcus aureus A10102]
gi|295405728|ref|ZP_06815538.1| recombination protein RecR [Staphylococcus aureus A8819]
gi|296276915|ref|ZP_06859422.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MR1]
gi|297245637|ref|ZP_06929505.1| recombination protein RecR [Staphylococcus aureus A8796]
gi|20139661|sp|Q99WC3|RECR_STAAN RecName: Full=Recombination protein recR
gi|189029377|sp|A6TYV4|RECR_STAA2 RecName: Full=Recombination protein recR
gi|189029378|sp|A5IQ32|RECR_STAA9 RecName: Full=Recombination protein recR
gi|13700370|dbj|BAB41668.1| recombination protein [Staphylococcus aureus subsp. aureus N315]
gi|147740007|gb|ABQ48305.1| DNA replication and repair protein RecR [Staphylococcus aureus
subsp. aureus JH9]
gi|149945436|gb|ABR51372.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
JH1]
gi|257789371|gb|EEV27711.1| recombination protein RecR [Staphylococcus aureus A9781]
gi|257839672|gb|EEV64141.1| recombination protein RecR [Staphylococcus aureus A9763]
gi|257842877|gb|EEV67299.1| recombination protein RecR [Staphylococcus aureus A9719]
gi|257848639|gb|EEV72626.1| recombination protein recR [Staphylococcus aureus A9299]
gi|257850692|gb|EEV74640.1| recombination protein recR [Staphylococcus aureus A8115]
gi|257855595|gb|EEV78530.1| recombination protein recR [Staphylococcus aureus A6300]
gi|257858692|gb|EEV81566.1| recombination protein recR [Staphylococcus aureus A6224]
gi|257862223|gb|EEV84996.1| recombination protein recR [Staphylococcus aureus A5937]
gi|262074389|gb|ACY10362.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ED98]
gi|282590837|gb|EFB95913.1| recombination protein RecR [Staphylococcus aureus A10102]
gi|282764305|gb|EFC04432.1| recombination protein RecR [Staphylococcus aureus A8117]
gi|285816179|gb|ADC36666.1| Recombination protein RecR [Staphylococcus aureus 04-02981]
gi|294969803|gb|EFG45822.1| recombination protein RecR [Staphylococcus aureus A8819]
gi|297177623|gb|EFH36874.1| recombination protein RecR [Staphylococcus aureus A8796]
gi|312828975|emb|CBX33817.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130110|gb|EFT86099.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
CGS03]
gi|329725651|gb|EGG62130.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
21172]
gi|329730673|gb|EGG67054.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
21193]
Length = 198
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I S
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIERLKSDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|223043449|ref|ZP_03613495.1| recombination protein RecR [Staphylococcus capitis SK14]
gi|314935110|ref|ZP_07842469.1| recombination protein RecR [Staphylococcus caprae C87]
gi|222443238|gb|EEE49337.1| recombination protein RecR [Staphylococcus capitis SK14]
gi|313653040|gb|EFS16803.1| recombination protein RecR [Staphylococcus caprae C87]
Length = 198
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 129/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICQDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LVERLKSDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|21282164|ref|NP_645252.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MW2]
gi|49485344|ref|YP_042565.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651361|ref|YP_185410.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
COL]
gi|82750187|ref|YP_415928.1| recombination protein RecR [Staphylococcus aureus RF122]
gi|87159968|ref|YP_493166.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194235|ref|YP_499027.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|151220656|ref|YP_001331478.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508725|ref|YP_001574384.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142545|ref|ZP_03567038.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253730828|ref|ZP_04864993.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735212|ref|ZP_04869377.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
TCH130]
gi|257424590|ref|ZP_05601019.1| recombination protein recR [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427256|ref|ZP_05603658.1| recombination protein recR [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429892|ref|ZP_05606279.1| recombination protein recR [Staphylococcus aureus subsp. aureus
68-397]
gi|257432595|ref|ZP_05608958.1| recombination protein recR [Staphylococcus aureus subsp. aureus
E1410]
gi|257435500|ref|ZP_05611551.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M876]
gi|258424487|ref|ZP_05687364.1| recombination protein RecR [Staphylococcus aureus A9635]
gi|258452486|ref|ZP_05700494.1| recombination protein recR [Staphylococcus aureus A5948]
gi|262049734|ref|ZP_06022600.1| recombination protein RecR [Staphylococcus aureus D30]
gi|262051992|ref|ZP_06024204.1| recombination protein RecR [Staphylococcus aureus 930918-3]
gi|282912685|ref|ZP_06320481.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913305|ref|ZP_06321097.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M899]
gi|282915796|ref|ZP_06323565.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
D139]
gi|282918259|ref|ZP_06326000.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C427]
gi|282922933|ref|ZP_06330623.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C101]
gi|282924530|ref|ZP_06332200.1| recombination protein RecR [Staphylococcus aureus A9765]
gi|283768196|ref|ZP_06341110.1| recombination protein recR [Staphylococcus aureus subsp. aureus
H19]
gi|284023489|ref|ZP_06377887.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
132]
gi|293498352|ref|ZP_06666206.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
58-424]
gi|293509293|ref|ZP_06668010.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M809]
gi|293550560|ref|ZP_06673232.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M1015]
gi|294850660|ref|ZP_06791383.1| recombination protein RecR [Staphylococcus aureus A9754]
gi|297209023|ref|ZP_06925423.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911026|ref|ZP_07128475.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH70]
gi|304380494|ref|ZP_07363172.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|24212225|sp|Q8NY07|RECR_STAAW RecName: Full=Recombination protein recR
gi|56749540|sp|Q6GC08|RECR_STAAS RecName: Full=Recombination protein recR
gi|71152039|sp|Q5HIJ7|RECR_STAAC RecName: Full=Recombination protein recR
gi|122540160|sp|Q2G0T3|RECR_STAA8 RecName: Full=Recombination protein recR
gi|123487161|sp|Q2FJG2|RECR_STAA3 RecName: Full=Recombination protein recR
gi|123548602|sp|Q2YVW5|RECR_STAAB RecName: Full=Recombination protein recR
gi|172048764|sp|A6QED4|RECR_STAAE RecName: Full=Recombination protein recR
gi|189029379|sp|A8Z0X4|RECR_STAAT RecName: Full=Recombination protein recR
gi|21203600|dbj|BAB94300.1| recombination protein [Staphylococcus aureus subsp. aureus MW2]
gi|49243787|emb|CAG42212.1| putative recombination protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285547|gb|AAW37641.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
COL]
gi|82655718|emb|CAI80117.1| recombination protein [Staphylococcus aureus RF122]
gi|87125942|gb|ABD20456.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201793|gb|ABD29603.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373456|dbj|BAF66716.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367534|gb|ABX28505.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725440|gb|EES94169.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726876|gb|EES95605.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
TCH130]
gi|257273608|gb|EEV05710.1| recombination protein recR [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276887|gb|EEV08338.1| recombination protein recR [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280373|gb|EEV10960.1| recombination protein recR [Staphylococcus aureus subsp. aureus
68-397]
gi|257283474|gb|EEV13606.1| recombination protein recR [Staphylococcus aureus subsp. aureus
E1410]
gi|257286096|gb|EEV16212.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M876]
gi|257845082|gb|EEV69119.1| recombination protein RecR [Staphylococcus aureus A9635]
gi|257859886|gb|EEV82726.1| recombination protein recR [Staphylococcus aureus A5948]
gi|259160121|gb|EEW45153.1| recombination protein RecR [Staphylococcus aureus 930918-3]
gi|259162196|gb|EEW46772.1| recombination protein RecR [Staphylococcus aureus D30]
gi|269940051|emb|CBI48427.1| putative recombination protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282315154|gb|EFB45540.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C101]
gi|282317956|gb|EFB48324.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C427]
gi|282320334|gb|EFB50675.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
D139]
gi|282323405|gb|EFB53724.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M899]
gi|282324381|gb|EFB54697.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282592839|gb|EFB97844.1| recombination protein RecR [Staphylococcus aureus A9765]
gi|283461141|gb|EFC08226.1| recombination protein recR [Staphylococcus aureus subsp. aureus
H19]
gi|283469772|emb|CAQ48983.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ST398]
gi|290919607|gb|EFD96683.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M1015]
gi|291097283|gb|EFE27541.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
58-424]
gi|291467932|gb|EFF10441.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M809]
gi|294822497|gb|EFG38943.1| recombination protein RecR [Staphylococcus aureus A9754]
gi|296886294|gb|EFH25227.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|298693809|gb|ADI97031.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ED133]
gi|300887205|gb|EFK82401.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH70]
gi|302332193|gb|ADL22386.1| putative recombination protein [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750370|gb|ADL64547.1| putative recombination protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341012|gb|EFM06934.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312436433|gb|ADQ75504.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH60]
gi|315196726|gb|EFU27072.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139231|gb|EFW31110.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142045|gb|EFW33870.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438497|gb|EGA96248.1| recombination protein RecR [Staphylococcus aureus O11]
gi|323441333|gb|EGA98996.1| recombination protein RecR [Staphylococcus aureus O46]
gi|329313198|gb|AEB87611.1| Recombination protein recR [Staphylococcus aureus subsp. aureus
T0131]
gi|329725116|gb|EGG61609.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
21189]
Length = 198
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I S
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|239637705|ref|ZP_04678675.1| recombination protein RecR [Staphylococcus warneri L37603]
gi|239596730|gb|EEQ79257.1| recombination protein RecR [Staphylococcus warneri L37603]
Length = 198
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R + H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLSFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREFKGLYHVLHGSISPMDGIGPEDINIPA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|71083215|ref|YP_265934.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91762355|ref|ZP_01264320.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1002]
gi|123647013|sp|Q4FNA8|RECR_PELUB RecName: Full=Recombination protein recR
gi|71062328|gb|AAZ21331.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718157|gb|EAS84807.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 203
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 127/192 (66%), Gaps = 2/192 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EIE LIK+++++PG GP+SA+R L L+ +++L+ P+A +A +Y V C CG + +
Sbjct: 6 EIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPMANTLAQVYKNVIRCQSCGTLKS 65
Query: 69 TD-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C + + + I VVED+AD W++E S +H+LGG++S + ED+ I
Sbjct: 66 NSLGCNNCENSKEKYNKICVVEDIADQWSIENSNIYKGYFHILGGTISSAGQ-RKEDLLI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ER+ + I E+I A SAT+EGQTTA+YI D LK K+T+LA G+P+G E++ LD
Sbjct: 125 NSLVERVSRENIEEVILATSATVEGQTTAYYIEDSLKKTSTKVTKLAQGLPVGGEIESLD 184
Query: 188 DGTIFEAIRSRT 199
DGT++ A ++RT
Sbjct: 185 DGTLYSAFKNRT 196
>gi|27469223|ref|NP_765860.1| recombination protein RecR [Staphylococcus epidermidis ATCC 12228]
gi|57866112|ref|YP_187712.1| recombination protein RecR [Staphylococcus epidermidis RP62A]
gi|242243367|ref|ZP_04797812.1| recombination protein RecR [Staphylococcus epidermidis W23144]
gi|251811245|ref|ZP_04825718.1| recombination protein RecR [Staphylococcus epidermidis BCM-HMP0060]
gi|282874601|ref|ZP_06283483.1| recombination protein RecR [Staphylococcus epidermidis SK135]
gi|293367697|ref|ZP_06614349.1| recombination protein R [Staphylococcus epidermidis
M23864:W2(grey)]
gi|33301520|sp|Q8CMS3|RECR_STAES RecName: Full=Recombination protein recR
gi|71152040|sp|Q5HRS7|RECR_STAEQ RecName: Full=Recombination protein recR
gi|27316772|gb|AAO05947.1|AE016751_242 recombination protein [Staphylococcus epidermidis ATCC 12228]
gi|57636770|gb|AAW53558.1| recombination protein RecR [Staphylococcus epidermidis RP62A]
gi|242233316|gb|EES35628.1| recombination protein RecR [Staphylococcus epidermidis W23144]
gi|251805206|gb|EES57863.1| recombination protein RecR [Staphylococcus epidermidis BCM-HMP0060]
gi|281296525|gb|EFA89037.1| recombination protein RecR [Staphylococcus epidermidis SK135]
gi|291318267|gb|EFE58661.1| recombination protein R [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399735|gb|EFV87983.1| recombination protein RecR [Staphylococcus epidermidis FRI909]
gi|329727986|gb|EGG64433.1| recombination protein RecR [Staphylococcus epidermidis VCU144]
gi|329734389|gb|EGG70703.1| recombination protein RecR [Staphylococcus epidermidis VCU028]
gi|329736120|gb|EGG72393.1| recombination protein RecR [Staphylococcus epidermidis VCU045]
Length = 198
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 129/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVKFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|157803801|ref|YP_001492350.1| recombination protein RecR [Rickettsia canadensis str. McKiel]
gi|172045660|sp|A8EYY2|RECR_RICCK RecName: Full=Recombination protein recR
gi|157785064|gb|ABV73565.1| recombination protein RecR [Rickettsia canadensis str. McKiel]
Length = 199
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 124/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + NI K+ C ICGN+D
Sbjct: 5 NDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLINIDKKIVKCEICGNMD 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD SVI +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 65 TENICRICSSEYRDKSVIAIVETVAELWAMERSGNFKGLYHVLGYNLSAASRKNPSMLRL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 125 PELLTRCFAANIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 184
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 185 EGTLSAAINLR 195
>gi|330684677|gb|EGG96379.1| recombination protein RecR [Staphylococcus epidermidis VCU121]
Length = 198
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 129/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREFKGLYHVLHGSISPMDGIGPEDINIPA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|70727531|ref|YP_254447.1| recombination protein RecR [Staphylococcus haemolyticus JCSC1435]
gi|123659170|sp|Q4L3D6|RECR_STAHJ RecName: Full=Recombination protein recR
gi|68448257|dbj|BAE05841.1| recombination protein [Staphylococcus haemolyticus JCSC1435]
Length = 198
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|157964523|ref|YP_001499347.1| recombination protein RecR [Rickettsia massiliae MTU5]
gi|157844299|gb|ABV84800.1| Recombination protein RecR [Rickettsia massiliae MTU5]
Length = 203
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 125/191 (65%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 9 NDIDQLIYLFSKLPGLGSRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNID 68
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 69 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 128
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 129 PELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 188
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 189 EGTVSAAINLR 199
>gi|172045676|sp|A8F1L4|RECR_RICM5 RecName: Full=Recombination protein recR
Length = 201
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 125/191 (65%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGSRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNID 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 187 EGTVSAAINLR 197
>gi|242372723|ref|ZP_04818297.1| recombination protein RecR [Staphylococcus epidermidis M23864:W1]
gi|242349640|gb|EES41241.1| recombination protein RecR [Staphylococcus epidermidis M23864:W1]
Length = 198
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 129/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H + KE + A+++ ++ ++ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKSLVDVKRELTYCSVCGHITEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SV+ VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSVVCVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LVERLKSDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|206901227|ref|YP_002251790.1| recombination protein RecR [Dictyoglomus thermophilum H-6-12]
gi|206740330|gb|ACI19388.1| recombination protein RecR [Dictyoglomus thermophilum H-6-12]
Length = 200
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E LI L +IPG GP+SA+R +L+K+ ++ + LA + + ++ CSIC N+
Sbjct: 7 FEKLIDELTKIPGIGPKSAQRIAFYLLKQPQESVESLANTILKVKKEIKHCSICFNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + +RD + I VV + DLWA+E++ N +YHVLGG +SPLD + PED+ I+
Sbjct: 67 DPCEICSNPERDKTTICVVAEPKDLWAIEKTSKFNGVYHVLGGLISPLDGVFPEDLRIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ +I+E+I A +T EG+ TA YI L VK+TRLA+G+P G+ELD+ D+
Sbjct: 127 LIERVKKGEIKEVILATDSTPEGEATAMYIARLLMEYPVKVTRLAHGLPAGTELDFADEI 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLIHALEGRKEL 198
>gi|239947272|ref|ZP_04699025.1| recombination protein RecR [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921548|gb|EER21572.1| recombination protein RecR [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 201
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 125/191 (65%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDIRLKSLINNLVEIDKKIVKCKICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENICHICSSEYRDKSIIAIVETVAELWAMERSGNFRGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 187 EGTLSAAINLR 197
>gi|238650290|ref|YP_002916142.1| recombination protein RecR [Rickettsia peacockii str. Rustic]
gi|259563705|sp|C4K0J3|RECR_RICPU RecName: Full=Recombination protein recR
gi|238624388|gb|ACR47094.1| recombination protein RecR [Rickettsia peacockii str. Rustic]
Length = 201
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 123/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHV G +LS R P + +
Sbjct: 67 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVFGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSR 198
DGT+ AI R
Sbjct: 187 DGTVSAAINLR 197
>gi|319891432|ref|YP_004148307.1| Recombination protein RecR [Staphylococcus pseudintermedius
HKU10-03]
gi|317161128|gb|ADV04671.1| Recombination protein RecR [Staphylococcus pseudintermedius
HKU10-03]
gi|323465398|gb|ADX77551.1| recombination protein RecR [Staphylococcus pseudintermedius ED99]
Length = 198
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 130/192 (67%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS+CG++
Sbjct: 5 QPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSVCGHIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC D+QRD S+I VVED D+ A+E+ K LYHVL G++SP+D IGPEDI I
Sbjct: 65 EQDPCYICEDKQRDRSMICVVEDDKDVIAMEKMKEYKGLYHVLHGTISPMDGIGPEDINI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ER++ + ++ELI A++ +EG++TA YI +K + +++TRLA G+ +G +L+Y D
Sbjct: 125 PSLVERLKDEGVKELILAMNPNLEGESTAMYISRLVKPLGIRVTRLAQGLSVGGDLEYAD 184
Query: 188 DGTIFEAIRSRT 199
+ T+ AI RT
Sbjct: 185 EVTLSRAISGRT 196
>gi|34580476|ref|ZP_00141956.1| recombination protein RecR [Rickettsia sibirica 246]
gi|229586721|ref|YP_002845222.1| recombination protein RecR [Rickettsia africae ESF-5]
gi|259563704|sp|C3PNG9|RECR_RICAE RecName: Full=Recombination protein recR
gi|28261861|gb|EAA25365.1| recombination protein RecR [Rickettsia sibirica 246]
gi|228021771|gb|ACP53479.1| Recombination protein RecR [Rickettsia africae ESF-5]
Length = 201
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 124/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENMCRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 187 EGTVSAAINLR 197
>gi|157828483|ref|YP_001494725.1| recombination protein RecR [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933201|ref|YP_001649990.1| recombination protein RecR [Rickettsia rickettsii str. Iowa]
gi|166221960|sp|A8GS42|RECR_RICRS RecName: Full=Recombination protein recR
gi|189029369|sp|B0BXK8|RECR_RICRO RecName: Full=Recombination protein recR
gi|157800964|gb|ABV76217.1| recombination protein RecR [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908288|gb|ABY72584.1| recombination protein [Rickettsia rickettsii str. Iowa]
Length = 201
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 124/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 187 EGTVSAAINLR 197
>gi|15892532|ref|NP_360246.1| recombination protein RecR [Rickettsia conorii str. Malish 7]
gi|20139547|sp|Q92I11|RECR_RICCN RecName: Full=Recombination protein recR
gi|15619693|gb|AAL03147.1| recombination protein RecR [Rickettsia conorii str. Malish 7]
Length = 201
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 124/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDIRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENMCRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSATSRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 187 EGTVSAAINLR 197
>gi|222152176|ref|YP_002561336.1| recombination protein RecR [Macrococcus caseolyticus JCSC5402]
gi|254790774|sp|B9E8X2|RECR_MACCJ RecName: Full=Recombination protein recR
gi|222121305|dbj|BAH18640.1| recombination protein RecR [Macrococcus caseolyticus JCSC5402]
Length = 198
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 128/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R H++ KE + A+A+ ++ ++ CS+CG++ T
Sbjct: 7 ISKLIDSFMKLPGIGPKTASRLAFHVLDMKEDDVVGFAKALVDVKRELTYCSVCGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I VVE+ D+ A+E+ + LYHVL G++SP++ +GPEDI + S
Sbjct: 67 DPCYICEDKTRDQSMICVVEETKDVIAMEKMREYKGLYHVLHGAISPMEGVGPEDINVPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + I+ELI A + IEG++TA YI +K I +K+TRLA+G+P+G +L+Y D+
Sbjct: 127 LLTRLRDEHIQELILATNPNIEGESTAMYIARLVKPIGIKVTRLAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAITGRT 196
>gi|325269487|ref|ZP_08136103.1| recombination protein R [Prevotella multiformis DSM 16608]
gi|324988106|gb|EGC20073.1| recombination protein R [Prevotella multiformis DSM 16608]
Length = 202
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 133/190 (70%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E ++ + +PG G ++A R LHL+++ + + A+A++++ + V C +C N+ +
Sbjct: 9 LERAVEAFSCLPGVGRKTALRLVLHLLRQSDDEVDGFADAISHVKHDVKYCKVCHNISDS 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D +RDAS++ VVE+V D+ A+E ++ + LYHVLGG +SPLD IGP D+ I+S
Sbjct: 69 DLCSICADPRRDASLVCVVENVQDVMAIENTQQFHGLYHVLGGVISPLDGIGPHDLEIES 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E +RE+I A+S+T+EG TT YI KLKG DVK++ +A GI +G EL+Y D+
Sbjct: 129 LVKRVEKGGVREIILALSSTMEGDTTNFYISRKLKGKDVKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSILNRT 198
>gi|228474164|ref|ZP_04058901.1| recombination protein RecR [Staphylococcus hominis SK119]
gi|228271859|gb|EEK13196.1| recombination protein RecR [Staphylococcus hominis SK119]
Length = 198
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R + + KE + A+A+ ++ ++ CSICG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCSICGHITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD S+I VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSIICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|222475000|ref|YP_002563415.1| recombination protein (recR) [Anaplasma marginale str. Florida]
gi|222419136|gb|ACM49159.1| recombination protein (recR) [Anaplasma marginale str. Florida]
Length = 170
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 116/169 (68%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
+HL++ ++ ++ PLA + + C+IC N+DT PC+IC D+ RD S+I VVE++
Sbjct: 1 MHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDTISPCSICSDKGRDQSIICVVEELG 60
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
DLWA ER + + +YHVLGG+LS L IGPED+ + +++RI ++E+I A S ++G
Sbjct: 61 DLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLGGIVDRIRTHGVKEVIVATSNDMDG 120
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
Q T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+
Sbjct: 121 QVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 169
>gi|314935125|ref|ZP_07842478.1| recombination protein RecR [Staphylococcus hominis subsp. hominis
C80]
gi|313656460|gb|EFS20199.1| recombination protein RecR [Staphylococcus hominis subsp. hominis
C80]
Length = 198
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R + + KE + A+A+ ++ ++ C+ICG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCNICGHITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD S+I VVED D+ A+E+ K LYHVL GS+SP+D IGPEDI I +
Sbjct: 67 DPCYICEDKQRDRSIICVVEDDKDVIAMEKMKEYKGLYHVLHGSISPMDGIGPEDINIPT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y D+
Sbjct: 127 LIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIAGRT 196
>gi|73663585|ref|YP_302366.1| recombination protein RecR [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123641631|sp|Q49UY9|RECR_STAS1 RecName: Full=Recombination protein recR
gi|72496100|dbj|BAE19421.1| recombinational DNA repair protein [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 198
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 128/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSECGHITEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI I S
Sbjct: 67 DPCYICQDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R++ ++++ELI A++ +EG++TA YI +K I + +TRLA G+ +G +L+Y D+
Sbjct: 127 LINRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGITVTRLAQGLSVGGDLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +AI RT
Sbjct: 187 TLSKAIMGRT 196
>gi|148284115|ref|YP_001248205.1| recombination protein RecR [Orientia tsutsugamushi str. Boryong]
gi|166918741|sp|A5CCA2|RECR_ORITB RecName: Full=Recombination protein recR
gi|146739554|emb|CAM79283.1| recombination protein [Orientia tsutsugamushi str. Boryong]
Length = 203
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 5/192 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI A++PG G RSARR L+L++ KE + L + ++ N + C CGN+D
Sbjct: 8 IEELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNLDVV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL---DRIGPEDIG 126
C IC +RD+S+I +VE VADLWALERSK YHVLG +LS + D I +
Sbjct: 68 SICNICRHSERDSSIIAIVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAINS--LK 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L+ RI K++E+I A ++TI+GQ TA +++D LK ++KI++LA GIP+G ELDYL
Sbjct: 126 LPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGELDYL 185
Query: 187 DDGTIFEAIRSR 198
D+GT+ A ++R
Sbjct: 186 DEGTLLAAFKAR 197
>gi|261404009|ref|YP_003240250.1| recombination protein RecR [Paenibacillus sp. Y412MC10]
gi|329930213|ref|ZP_08283826.1| recombination protein RecR [Paenibacillus sp. HGF5]
gi|261280472|gb|ACX62443.1| recombination protein RecR [Paenibacillus sp. Y412MC10]
gi|328935235|gb|EGG31716.1| recombination protein RecR [Paenibacillus sp. HGF5]
Length = 199
Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 128/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A R H++ KE + A+A+ ++ + CS+C N+ T
Sbjct: 7 IAKLIDAFTRLPGVGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSVCCNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D+ RDAS+I VV+D DL A+ER+K YHVL G++SP++ IGP++I ++
Sbjct: 67 DPCRVCQDKTRDASIICVVQDAKDLVAMERTKEFEGYYHVLHGAISPMEGIGPDEIRLKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A +A IEG+ TA YI ++ D+K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLTRLSDERVKELILATNANIEGEATAMYISRLVRPFDIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|293374917|ref|ZP_06621215.1| recombination protein RecR [Turicibacter sanguinis PC909]
gi|325844363|ref|ZP_08168118.1| recombination protein RecR [Turicibacter sp. HGF1]
gi|292646466|gb|EFF64478.1| recombination protein RecR [Turicibacter sanguinis PC909]
gi|325489168|gb|EGC91551.1| recombination protein RecR [Turicibacter sp. HGF1]
Length = 200
Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 128/195 (65%), Gaps = 1/195 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKK-KEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ I LI+ L+++PG G ++A R +++ KE + A+A+ + ++ C ICG++
Sbjct: 5 QPITKLIESLSKLPGIGNKTAERLAFYVISSMKEDDVTTFAKALIDSKRQLFKCPICGHI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
TDPC+IC D RD S+I VV+D D+ A+ER + LYHVL G LSPLD +GPEDIG
Sbjct: 65 TDTDPCSICSDSHRDRSLIAVVQDPKDVIAIERMRGFKGLYHVLNGVLSPLDGMGPEDIG 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I +LIER++ + ++ELI A+SAT+EG T+ YI LK DVK+TR+A G+ MG ++Y
Sbjct: 125 IPALIERLKDENVKELILALSATLEGDATSQYIAKLLKNTDVKVTRIARGLEMGRSIEYA 184
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ R L
Sbjct: 185 DEVTLIRALEGRREL 199
>gi|169830252|ref|YP_001716234.1| recombination protein RecR [Candidatus Desulforudis audaxviator
MP104C]
gi|254790796|sp|B1I162|RECR_DESAP RecName: Full=Recombination protein recR
gi|169637096|gb|ACA58602.1| recombination protein RecR [Candidatus Desulforudis audaxviator
MP104C]
Length = 198
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 123/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ LAR+PG GP++A+R HLV + L+ A+ +K+ C +C N+
Sbjct: 5 RSVGRLIEELARLPGIGPKTAQRLAFHLVTAPREAAESLSRAILEARDKLVFCRVCANIA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+PC IC DQ RD +I VVE D+ A+E++ LYHVL GSLSPL +GPE++ I
Sbjct: 65 DENPCGICRDQNRDHGLICVVERPRDVLAVEKAHGYRGLYHVLNGSLSPLQGVGPEELNI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R+ +RE+I A +AT+EG+ TA Y+ L+ ++V++TRLA+G+P+GS+L+Y D
Sbjct: 125 AALVTRVREGTVREVIVATNATVEGEATALYLARLLRPLNVRVTRLAFGLPVGSDLEYAD 184
Query: 188 DGTIFEAIRSR 198
T+ AI R
Sbjct: 185 GRTLARAIEGR 195
>gi|117925037|ref|YP_865654.1| DNA replication and repair protein RecR [Magnetococcus sp. MC-1]
gi|171460778|sp|A0L8F5|RECR_MAGSM RecName: Full=Recombination protein recR
gi|117608793|gb|ABK44248.1| DNA replication and repair protein RecR [Magnetococcus sp. MC-1]
Length = 200
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 125/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E I++ +R+PG G +SA+R HL+K+ + L + + + ++ C +C N+
Sbjct: 8 LERSIELFSRLPGVGRKSAQRMVYHLLKEGGREATLLGQGLLALSERIHFCEVCHNLAEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC D +RD +I VVE+ D+ A+ER+ A LYHVLGG LSP+D IGP+ + + +
Sbjct: 68 GLCAICQDSKRDHGLICVVEEPVDVLAMERAGAYRGLYHVLGGRLSPMDGIGPDALYLDA 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +RELI A + T+ G+ TAHYI + + + I+RLAYG+PMG EL+YLD+
Sbjct: 128 LLERLQQGGVRELIIATNPTVAGEATAHYITQLAQPLTIDISRLAYGMPMGGELEYLDES 187
Query: 190 TIFEAIRSR 198
T+F+A++ R
Sbjct: 188 TLFQALQGR 196
>gi|15612599|ref|NP_240902.1| recombination protein RecR [Bacillus halodurans C-125]
gi|20139779|sp|Q9KGM3|RECR_BACHD RecName: Full=Recombination protein recR
gi|10172648|dbj|BAB03755.1| DNA repair and genetic recombination [Bacillus halodurans C-125]
Length = 198
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 127/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ R+PG GP++A R +++ KE + A+A+ N+ K+ CS+C N+ T
Sbjct: 7 IAKLIEGFMRLPGIGPKTASRLAFFVLEMKEDDVLDFAKALVNVKRKLTYCSVCHNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD SVI VV+D D+ A+E+ K + YHVL G++SP+D IGPEDI I
Sbjct: 67 DPCRICEDSKRDESVICVVQDAKDVIAMEKMKEYHGKYHVLHGAISPMDGIGPEDIKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ I+E+I A + TIEG+ TA YI +K +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LIKRLQDDTIQEVIVATNPTIEGEATAMYISRLVKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKAMEGRREL 198
>gi|189184710|ref|YP_001938495.1| recombination protein RecR [Orientia tsutsugamushi str. Ikeda]
gi|238692026|sp|B3CV64|RECR_ORITI RecName: Full=Recombination protein recR
gi|189181481|dbj|BAG41261.1| recombination protein RecR [Orientia tsutsugamushi str. Ikeda]
Length = 203
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A++PG G RSARR L+L++ KE + L + ++ N + C CGN+D
Sbjct: 8 IDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNLDIV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD-RIGPEDIGIQ 128
C IC +RD+S I VVE VADLWALERSK YHVLG +LS + + +
Sbjct: 68 SICNICKHSERDSSTIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAVNSLKLP 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RI K++E+I A ++TI+GQ TA +++D LK ++KI++LA GIP+G ELDYLD+
Sbjct: 128 KLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGELDYLDE 187
Query: 189 GTIFEAIRSR 198
GT+ A ++R
Sbjct: 188 GTLLAAFKAR 197
>gi|217966693|ref|YP_002352199.1| recombination protein RecR [Dictyoglomus turgidum DSM 6724]
gi|217335792|gb|ACK41585.1| recombination protein RecR [Dictyoglomus turgidum DSM 6724]
Length = 200
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E LI L ++PG GP+ A+R +L+K+ ++ + LA + + ++ CSIC N+
Sbjct: 7 FEKLIDELTKLPGIGPKLAQRIAFYLLKQPQESVEVLANTILKVKKEIKYCSICFNLTEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + +RD S+I VV + DLWA+E++ + +YHVLGG +SPLD + PED+ I+
Sbjct: 67 DPCEICTNPERDKSIICVVAEPKDLWAIEKTSKFHGVYHVLGGLISPLDGVFPEDLRIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ I+E+I A +T EG+ TA YI L VK+TRLA+G+P G+ELD+ D+
Sbjct: 127 LMERVKKGNIKEVILATDSTPEGEATAMYIARLLMEYPVKVTRLAHGLPAGTELDFADEM 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLIHALEGRKEL 198
>gi|315644461|ref|ZP_07897594.1| recombination protein RecR [Paenibacillus vortex V453]
gi|315280211|gb|EFU43504.1| recombination protein RecR [Paenibacillus vortex V453]
Length = 199
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 127/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A R H++ KE + A+A+ ++ + CS+C N+ T
Sbjct: 7 IAKLIDAFTRLPGVGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSVCCNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D+ RD S I VV+D DL A+ER+K + YHVL G++SP++ IGP++I ++
Sbjct: 67 DPCRVCQDKTRDPSTICVVQDAKDLVAMERTKEFDGYYHVLHGAISPMEGIGPDEIRLKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A +A IEG+ TA YI ++ D+K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLTRLSDERVKELILATNANIEGEATAMYISRLVRPFDIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|332800255|ref|YP_004461754.1| Recombination protein recR [Tepidanaerobacter sp. Re1]
gi|332697990|gb|AEE92447.1| Recombination protein recR [Tepidanaerobacter sp. Re1]
Length = 198
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP++A+R +++K + + LA+A+ + CSICGN
Sbjct: 8 LDRLIGELSRLPGIGPKTAQRLAFYILKMSKDRVESLADAILQAKELITYCSICGNFTDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC RD + I+VVED D+ A+E+++ LYHVL G++SPL+ IGP+DI I+
Sbjct: 68 DPCSICQTPYRDKNTIMVVEDPKDIVAMEKTRDYKGLYHVLHGAISPLEGIGPDDIKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ RI +I+E+I A + +EG+ TA Y+ LK +DVK+TR+AYGIPMG +L+Y D+
Sbjct: 128 LLARI-TPEIKEIILATNPNVEGEATAMYLAKLLKPLDVKVTRIAYGIPMGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLTKALEGR 195
>gi|50085407|ref|YP_046917.1| recombination protein RecR [Acinetobacter sp. ADP1]
gi|73621454|sp|Q6FA18|RECR_ACIAD RecName: Full=Recombination protein recR
gi|49531383|emb|CAG69095.1| recombination protein, gap repair [Acinetobacter sp. ADP1]
Length = 198
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ L +P GP+SA+R LHL+ K + LA A+ + + C IC ++
Sbjct: 6 FEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICHSLTEN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+ RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 66 EICDICLSNDRDQHLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +I E+I A +AT+EGQ TAHY+++ K + V +TR+A G+P G EL+Y+D
Sbjct: 126 LIQRLSSGEIEEVILATNATVEGQATAHYLLEATKHLPVHMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|253577377|ref|ZP_04854694.1| recombination protein RecR [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843277|gb|EES71308.1| recombination protein RecR [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 202
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 126/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG GP++A R H++ KE + A+A+ ++ + CSIC N+ T
Sbjct: 13 IAKLIDAFTHLPGIGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSICCNITDT 72
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RDASVI VV++ DL A+ER+K + YHVL G++SP++ +GP+DI ++
Sbjct: 73 DPCRICQDKTRDASVICVVQESKDLVAMERTKEFDGYYHVLQGAISPMEGLGPDDIRLKE 132
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A + IEG+ TA YI +K D+++TR+A+G+P+G +L+Y D+
Sbjct: 133 LLNRLSDERVKELILATNPNIEGEATAMYISRLVKPFDIRVTRIAHGLPVGGDLEYADEV 192
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 193 TLSKALEGR 201
>gi|297182769|gb|ADI18923.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11
cluster bacterium HF0010_09O16]
Length = 203
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 128/194 (65%), Gaps = 2/194 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI++LIKI++++PG GP+SA+R L L+ K++L+ P+A ++ +Y V C++CG++ +
Sbjct: 6 EIDDLIKIISKLPGLGPKSAKRIVLKLINNKDELVKPMANSLVQVYKNVTRCNLCGSLKS 65
Query: 69 T-DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C + + + I VVED++D W++E S YH+LGG+++ ED+ I
Sbjct: 66 NIKGCFNCANVREKFNKICVVEDISDQWSIENSNIFKGYYHILGGTIASAGN-RKEDLLI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ER+ KI E+I A+S T+EGQTTA+YI D LK +V +T+LA G+P+G + LD
Sbjct: 125 NSLVERVNKDKIEEVILALSETVEGQTTAYYIRDSLKNSNVSVTKLARGMPIGYSPENLD 184
Query: 188 DGTIFEAIRSRTVL 201
DGT+ A ++R L
Sbjct: 185 DGTLLSAFKNRLKL 198
>gi|51473627|ref|YP_067384.1| recombination protein RecR [Rickettsia typhi str. Wilmington]
gi|73621512|sp|Q68WU0|RECR_RICTY RecName: Full=Recombination protein recR
gi|51459939|gb|AAU03902.1| recombination protein RecR [Rickettsia typhi str. Wilmington]
Length = 199
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C ICGN+D
Sbjct: 5 NDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKCEICGNMD 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R P + +
Sbjct: 65 TKNICHICSSEHRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQNPRILRL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G ELDYLD
Sbjct: 125 PELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIGGELDYLD 184
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 185 EGTLSAAINLR 195
>gi|261417518|ref|YP_003251200.1| recombination protein RecR [Geobacillus sp. Y412MC61]
gi|319765176|ref|YP_004130677.1| recombination protein RecR [Geobacillus sp. Y412MC52]
gi|261373975|gb|ACX76718.1| recombination protein RecR [Geobacillus sp. Y412MC61]
gi|317110042|gb|ADU92534.1| recombination protein RecR [Geobacillus sp. Y412MC52]
Length = 198
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG++ T
Sbjct: 7 LSKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD + I VV+D D+ A+ER K N LYHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICKDERRDRTTICVVQDPKDVIAMERMKEYNGLYHVLHGAISPMEGIGPEDIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + I+E+I A IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLTRLQDETIQEVILATDPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|89100951|ref|ZP_01173797.1| recombination protein RecR [Bacillus sp. NRRL B-14911]
gi|89084322|gb|EAR63477.1| recombination protein RecR [Bacillus sp. NRRL B-14911]
Length = 198
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLSYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ+RD SVI V++D D+ A+E+ K N LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDQRRDRSVICVLQDPKDVIAMEKMKEFNGLYHVLHGAISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + + E+I A + IEG+ TA YI LK +KITR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDETVEEVILATNPNIEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|317502630|ref|ZP_07960750.1| recombination protein R [Prevotella salivae DSM 15606]
gi|315666249|gb|EFV05796.1| recombination protein R [Prevotella salivae DSM 15606]
Length = 203
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 131/199 (65%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +E + +++PG G +SA R L++++++ + + +EA+ + ++V C
Sbjct: 1 MSDKYPSSLLEKAVSEFSKLPGIGRKSALRLVLYMLRRENEEVDAFSEAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC D +RDA+ I VVE++ D+ A+E+++ N LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTEVCPICSDVRRDATTICVVENIQDVMAIEKTQQYNGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL+ER++ KI+E+I A+S+T+EG TT +I KL DV I+ +A GI +G
Sbjct: 121 GPNDIEISSLVERVKTGKIKEVILALSSTMEGDTTNFFISRKLADFDVAISVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIINRT 199
>gi|226954028|ref|ZP_03824492.1| recombination protein, gap repair [Acinetobacter sp. ATCC 27244]
gi|294650366|ref|ZP_06727733.1| recombination protein R [Acinetobacter haemolyticus ATCC 19194]
gi|226835218|gb|EEH67601.1| recombination protein, gap repair [Acinetobacter sp. ATCC 27244]
gi|292823779|gb|EFF82615.1| recombination protein R [Acinetobacter haemolyticus ATCC 19194]
Length = 198
Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 123/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ E L++ L +P GP+SA+R LHL+ K + L+ A+ + + C IC ++
Sbjct: 4 ERFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALSHALHEASSHIHECHICHSLT 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 64 ENEICDICASTERDEQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R+ K++E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+Y+D
Sbjct: 124 PYLIQRLSEGKVQEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVD 183
Query: 188 DGTIFEAIRSR 198
T+ +A+ +R
Sbjct: 184 SHTLSQAVHNR 194
>gi|294787158|ref|ZP_06752411.1| recombination protein RecR [Parascardovia denticolens F0305]
gi|315227305|ref|ZP_07869092.1| recombination protein R [Parascardovia denticolens DSM 10105]
gi|294484514|gb|EFG32149.1| recombination protein RecR [Parascardovia denticolens F0305]
gi|315119755|gb|EFT82888.1| recombination protein R [Parascardovia denticolens DSM 10105]
Length = 203
Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 127/192 (66%), Gaps = 3/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+N+I A +PG GP+ A+R HL+ ++ LAE++ + KV C ICGNV +
Sbjct: 9 IQNVIDRFASLPGIGPKGAQRIAFHLLSVSQEDAQALAESILTMKEKVRFCEICGNVCES 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC IC+D +RD ++I VV++ D+ +LER+ LYHVLGG++ P+ +GP+D+ I
Sbjct: 69 SPCPICLDPRRDRTIICVVQEPKDIMSLERTHEYRGLYHVLGGAIDPMADVGPQDLHITD 128
Query: 130 LIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R+ E K+I+E+IFA++ IEG+ T Y+ L+ +D+K+TRLA G+PMGS+L+Y
Sbjct: 129 LLNRLKTDEGKEIKEIIFALNPDIEGEATTTYLSRLLEPLDIKLTRLASGLPMGSDLEYA 188
Query: 187 DDGTIFEAIRSR 198
D+ T+ A+ R
Sbjct: 189 DEITLGRALSGR 200
>gi|189459398|ref|ZP_03008183.1| hypothetical protein BACCOP_00019 [Bacteroides coprocola DSM 17136]
gi|189433855|gb|EDV02840.1| hypothetical protein BACCOP_00019 [Bacteroides coprocola DSM 17136]
Length = 222
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ Q + A+ + +V C
Sbjct: 18 MSQQYPSVLLEKAVGEFAKLPGIGRKTAMRLVLHLLRQDLQTVEAFGNAVITLKREVKYC 77
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 78 RVCHNISDTDVCQICSNSSRDASTVCVVENIRDVMAVENTQQYKGLYHVLGGVISPMDGV 137
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ +RE+I A+S+T+EG TT YI KL DVK+T +A GI +G
Sbjct: 138 GPSDLQIESLVERVKSGTVREVILALSSTMEGDTTNFYIFRKLAPYDVKLTMIARGISIG 197
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RTV
Sbjct: 198 DELEYTDEVTLGRSIVNRTVF 218
>gi|126652953|ref|ZP_01725095.1| recombination protein RecR [Bacillus sp. B14905]
gi|126590283|gb|EAZ84405.1| recombination protein RecR [Bacillus sp. B14905]
Length = 198
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE+ + ++A+ + + CS+CGN+
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFFVLSMKEEDVLSFSKALVDAKRNLSYCSVCGNITDV 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPEDI + S
Sbjct: 67 DPCHICTDKQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPEDINVAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+
Sbjct: 127 LLVRLHDESVQELILATNSTIEGEATAMYISRLVKPSGIRATRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKAMEGRREL 198
>gi|56418554|ref|YP_145872.1| recombination protein RecR [Geobacillus kaustophilus HTA426]
gi|297528394|ref|YP_003669669.1| recombination protein RecR [Geobacillus sp. C56-T3]
gi|73621486|sp|Q5L3X4|RECR_GEOKA RecName: Full=Recombination protein recR
gi|56378396|dbj|BAD74304.1| DNA repair and genetic recombination protein [Geobacillus
kaustophilus HTA426]
gi|297251646|gb|ADI25092.1| recombination protein RecR [Geobacillus sp. C56-T3]
Length = 198
Score = 170 bits (431), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG++ T
Sbjct: 7 LSKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD + I VV+D D+ A+ER K N LYHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICKDERRDRTTICVVQDPKDVIAMERMKEYNGLYHVLHGAISPMEGIGPEDIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + ++E+I A IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLTRLQDETVQEVILATDPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|90416004|ref|ZP_01223937.1| recombination protein RecR [marine gamma proteobacterium HTCC2207]
gi|90332378|gb|EAS47575.1| recombination protein RecR [marine gamma proteobacterium HTCC2207]
Length = 197
Score = 170 bits (431), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 129/197 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G I+ LI L +PG G +SA+R LHL+++ LAE++ KV C+ C
Sbjct: 1 MYGNVIDQLIDALRVLPGVGNKSAQRMALHLLERDRSGATRLAESLVEAVEKVGRCAQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + CAIC +++R A I VVE+ ADL+A+E++ + Y VL G LSP+D IGPE
Sbjct: 61 SLTEHEVCAICRNERRLADQICVVENPADLYAIEQAGSFRGKYFVLLGHLSPIDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ER++ I ELI A + T+EG+ TAH+I DK K + V+++R+AYG+PMG EL+
Sbjct: 121 LGIDQLVERLKNGYISELILATNLTVEGEATAHFIADKAKALGVEVSRIAYGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ A++SR L
Sbjct: 181 YVDGGTLNMALQSRKSL 197
>gi|299770308|ref|YP_003732334.1| recombination protein RecR [Acinetobacter sp. DR1]
gi|298700396|gb|ADI90961.1| recombination protein RecR [Acinetobacter sp. DR1]
Length = 198
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C ++
Sbjct: 6 FEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +R+ ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 66 EICDICASTEREDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ KI E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+Y+D
Sbjct: 126 LIQRLSQGKIEEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|138893697|ref|YP_001124150.1| recombination protein RecR [Geobacillus thermodenitrificans NG80-2]
gi|196251183|ref|ZP_03149858.1| recombination protein RecR [Geobacillus sp. G11MC16]
gi|166221942|sp|A4IJA1|RECR_GEOTN RecName: Full=Recombination protein recR
gi|134265210|gb|ABO65405.1| RecR [Geobacillus thermodenitrificans NG80-2]
gi|196209309|gb|EDY04093.1| recombination protein RecR [Geobacillus sp. G11MC16]
Length = 198
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG++ T
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD ++I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICKDERRDRTMICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + I+E+I A IEG+ TA Y+ LK +KITR+A+G+P+G +L+Y D+
Sbjct: 127 LLARLQDETIQEVILATDPNIEGEATAMYLSRLLKPTGIKITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|299542066|ref|ZP_07052382.1| recombination protein RecR [Lysinibacillus fusiformis ZC1]
gi|298725381|gb|EFI66029.1| recombination protein RecR [Lysinibacillus fusiformis ZC1]
Length = 198
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 125/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + ++A+ + + CS+CGN+
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFFVLTMKEDDVLSFSKALIDAKRNLSYCSVCGNITDV 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPEDI + S
Sbjct: 67 DPCHICTDKQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPEDINVAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+
Sbjct: 127 LLVRLQNESVQELILATNSTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKAMEGR 195
>gi|296131620|ref|YP_003638867.1| recombination protein RecR [Thermincola sp. JR]
gi|296030198|gb|ADG80966.1| recombination protein RecR [Thermincola potens JR]
Length = 198
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ A++PG GP++A+R H++ + LA+A+ N K+ CSIC N+ T
Sbjct: 7 VARLIEEFAKLPGIGPKTAQRLAFHILNSDAESAHGLAKALINAKQKIRYCSICSNLTDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D RD + I VVE D+ A+ER++ LYHVL G++SP+D IGPE + I+
Sbjct: 67 DPCKLCQDSTRDRNTICVVEQARDVVAIERTREYKGLYHVLHGAISPMDGIGPEQLKIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ ++E+I A + IEG+ TA Y+ LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 127 LLERLQKNSVQEIILATNPNIEGEATAMYLARLLKPMGVRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A R
Sbjct: 187 TLSKAFEGR 195
>gi|325972847|ref|YP_004249038.1| recombination protein recR [Spirochaeta sp. Buddy]
gi|324028085|gb|ADY14844.1| Recombination protein recR [Spirochaeta sp. Buddy]
Length = 196
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L+R+PG GP+SA R HL+K + LA+A+A I +K+ CSICG+
Sbjct: 4 LENLIQTLSRLPGIGPKSASRLAYHLIKTDKLYNSTLADAIATIQDKIFPCSICGSFTEY 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D RD + + VVE D+ L+ S A N LYHVLGG++SPLD IGPE +
Sbjct: 64 DPCPMCGDTSRDRTQLCVVEQPQDVLTLQSSGAYNGLYHVLGGAISPLDGIGPEHLSFSK 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
L++RI+ ELI A + T EG TTA Y+ LK ++ ITRLA G+P+G +L+Y D
Sbjct: 124 LVKRIDEGGFTELIIATNPTEEGDTTALYLRHILKNHEELSITRLASGLPIGGDLEYADR 183
Query: 189 GTIFEAIRSR 198
T+ ++R R
Sbjct: 184 ITLARSLRGR 193
>gi|303235790|ref|ZP_07322397.1| recombination protein RecR [Prevotella disiens FB035-09AN]
gi|302484237|gb|EFL47225.1| recombination protein RecR [Prevotella disiens FB035-09AN]
Length = 202
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 130/192 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ + E ++ + + + C +C N+ T
Sbjct: 9 LEKAVGEFAKLPGVGRKTALRFVLHLLRESKEEVDVFTETISTMRHDIKYCHVCHNISDT 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D CAIC + +RD+S I VVE+V D+ A+E ++ N LYHVLGG +SP+D IGP ++ I+S
Sbjct: 69 DTCAICANSRRDSSTICVVENVQDVLAIENTQQFNGLYHVLGGIISPIDGIGPNNLEIES 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ I+E+I A+++T+EG TT YI KLK D+ I+ +A GI +G EL+Y D+
Sbjct: 129 LVERVKSGGIKEVILALASTMEGDTTNFYISRKLKEYDITISIIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT++
Sbjct: 189 TLGRSIANRTIM 200
>gi|184199928|ref|YP_001854135.1| recombination protein RecR [Kocuria rhizophila DC2201]
gi|183580158|dbj|BAG28629.1| recombination protein RecR [Kocuria rhizophila DC2201]
Length = 201
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + + L +A++ + V C ICGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLDADKDEVQQLVDAISTVKTSVSFCVICGNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D +RD SVI VVE+ D+ A+ER+++ LYHVLGG++SPL +GP+ + I+
Sbjct: 66 EECAICRDARRDRSVICVVEESKDVMAIERTRSYRGLYHVLGGAISPLQGVGPDQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ++E++ A +EG+ TA Y+ LK + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLSDETVQEIVLATDPNLEGEATATYLSRLLKTLGIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A RTV+
Sbjct: 186 TLGRAFEGRTVV 197
>gi|289422930|ref|ZP_06424753.1| recombination protein RecR [Peptostreptococcus anaerobius 653-L]
gi|289156653|gb|EFD05295.1| recombination protein RecR [Peptostreptococcus anaerobius 653-L]
Length = 199
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 125/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI +++PG G ++A+R H++ E + LA+A+ ++ ++ CS+C N+ +
Sbjct: 8 IDRLINEFSKLPGVGRKTAQRLAFHVINMNENDVKGLAKALVDVKQEIKYCSVCCNISDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + RDAS I VVED D+ A+ER+K N YHVL G +SPLD +GPE + I+
Sbjct: 68 DVCPICSNSHRDASTICVVEDPRDVAAMERTKDYNGKYHVLNGVISPLDGVGPEMLNIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ +++ELI A + TIEG+ TA YI +K + VK+TR+A+G+P+G +L+Y DD
Sbjct: 128 LISRLGDGQVKELIMATNPTIEGEATAMYISRLVKPMGVKVTRIAHGLPVGGDLEYADDV 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TISKALEGR 196
>gi|213691082|ref|YP_002321668.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296453326|ref|YP_003660469.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JDM301]
gi|254790753|sp|B7GT67|RECR_BIFLI RecName: Full=Recombination protein recR
gi|213522543|gb|ACJ51290.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296182757|gb|ADG99638.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JDM301]
gi|320457138|dbj|BAJ67759.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 200
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI R+PG GP+ A+R +++ E LAEA+ + K+ C ICGNV +
Sbjct: 9 IQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCDICGNVCES 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ +GP D+ I S
Sbjct: 69 SPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVGPADLRIPS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E +++E+I A+ IEG+ T Y+ L+ + VK+TRLA G+P+GS+L+Y D+
Sbjct: 129 LLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVGSDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|193214870|ref|YP_001996069.1| recombination protein RecR [Chloroherpeton thalassium ATCC 35110]
gi|229890141|sp|B3QYJ4|RECR_CHLT3 RecName: Full=Recombination protein recR
gi|193088347|gb|ACF13622.1| recombination protein RecR [Chloroherpeton thalassium ATCC 35110]
Length = 205
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 132/204 (64%), Gaps = 6/204 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T +E LI A++PG G ++A+R T+ ++ ++++ + LA+A+ ++ NKV CS+C
Sbjct: 2 RYTSHAVETLIDEFAKLPGIGRKTAQRLTMFILHEEKEKVESLAQALLDLKNKVSYCSLC 61
Query: 64 GNV--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC IC +RD V+ VVE D+ A E++ N LYHVL G +SPLD +G
Sbjct: 62 QNVTDKEIDPCNICTSVKRDKRVVCVVEAPNDVLAFEKTNQYNGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
P+D+ ++ LI R+ I+E+I AI+ T+EG+TT Y+ LK + VK+TR+A GI
Sbjct: 122 PDDLKVKELIHRLSETDPETSIKEVILAINPTVEGETTVLYLSKLLKPLGVKVTRIARGI 181
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+EL+Y+DD T+ A+ R+ L
Sbjct: 182 PIGTELEYIDDATLTRALEGRSEL 205
>gi|262370489|ref|ZP_06063815.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046]
gi|262314831|gb|EEY95872.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046]
Length = 198
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C ++
Sbjct: 6 FDQLVQALRILPSVGPKSAQRMALHLIMKNREGAVGLAHALNEATSYIHECSLCHSLTEN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C ICI +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD +GPE+IGI
Sbjct: 66 EVCDICISHERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGVGPEEIGIPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ K+ E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+Y+D
Sbjct: 126 LIQRLGDGKVTEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|83588903|ref|YP_428912.1| DNA replication and repair protein RecR [Moorella thermoacetica
ATCC 39073]
gi|123525295|sp|Q2RMH0|RECR_MOOTA RecName: Full=Recombination protein recR
gi|83571817|gb|ABC18369.1| DNA replication and repair protein RecR [Moorella thermoacetica
ATCC 39073]
Length = 199
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L R+PG GP++A+R HL+K LA A+ K CSICGN
Sbjct: 7 LNKLITALGRLPGIGPKTAQRLAFHLLKVPASEARDLAAAILEARQKTIYCSICGNFTDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D +RD S I VVE+ D+ ALE+++ LYHVL G++SP+D IGPE + ++
Sbjct: 67 DPCRLCSDPERDHSCICVVEEARDIIALEKTRQYRGLYHVLQGAISPVDGIGPEQLRVKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ K++E+I A +A +EG++TA Y+ LK + VK+TRLAYG+P+G +L+Y D+
Sbjct: 127 LLARLHDGKVKEVILATNADVEGESTALYLDKLLKTLGVKVTRLAYGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 TLARAFAGRHEL 198
>gi|319655050|ref|ZP_08009120.1| recombination protein RecR [Bacillus sp. 2_A_57_CT2]
gi|317393274|gb|EFV74042.1| recombination protein RecR [Bacillus sp. 2_A_57_CT2]
Length = 198
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLSYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ+RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDQRRDRSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI +K +K TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDETVQEIILATNPNIEGEATAMYISRLIKPSGIKATRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|332980767|ref|YP_004462208.1| DNA replication and repair protein RecR [Mahella australiensis 50-1
BON]
gi|332698445|gb|AEE95386.1| DNA replication and repair protein RecR [Mahella australiensis 50-1
BON]
Length = 199
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 126/192 (65%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ I LI L+++PG GP++A+R +++ + + LA+++ + +K+ CSICGN+
Sbjct: 5 AEPISRLINELSKLPGIGPKTAQRLAFYMLHMPKDAVHTLAQSINDARDKIIYCSICGNL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPCAIC RD S I VVE D+ A+E+++ N LYHVL G++SP+D +GP+DI
Sbjct: 65 TDVDPCAICSSSTRDNSTICVVESPTDVVAMEKTRGYNGLYHVLHGAISPIDGVGPDDIR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ R+ +++E+I A + ++EG+ TA YI LK + K+TR+A GIP+G +L+Y
Sbjct: 125 IKELLTRLRDSQVKEVILATNPSVEGEATALYISRMLKPMGFKVTRIANGIPVGGDLEYA 184
Query: 187 DDGTIFEAIRSR 198
D+ TI A+ R
Sbjct: 185 DEVTITRALEGR 196
>gi|15604303|ref|NP_220819.1| recombination protein RecR [Rickettsia prowazekii str. Madrid E]
gi|3860995|emb|CAA14895.1| RECOMBINATION PROTEIN RECR (recR) [Rickettsia prowazekii]
Length = 226
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 124/190 (65%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C ICGN+DT
Sbjct: 33 DIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKCEICGNLDT 92
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R P + +
Sbjct: 93 KSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQNPRILRLP 152
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G ELDYLD+
Sbjct: 153 ELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIGGELDYLDE 212
Query: 189 GTIFEAIRSR 198
GT+ AI R
Sbjct: 213 GTLSAAISLR 222
>gi|189423438|ref|YP_001950615.1| recombination protein RecR [Geobacter lovleyi SZ]
gi|229890151|sp|B3E1K3|RECR_GEOLS RecName: Full=Recombination protein recR
gi|189419697|gb|ACD94095.1| recombination protein RecR [Geobacter lovleyi SZ]
Length = 197
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ L ++PG G R+A R HL+K Q LG LAEA+ + +VC CS+C +
Sbjct: 8 LTRLVGELKKLPGIGERTALRLAFHLLKSP-QNLGSLAEALTQVQERVCACSVCFALTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+PC IC RD+SVI VVE D+ ALERS A + YHVL G++SPL + P+D+ I+
Sbjct: 67 NPCPIC-SGGRDSSVICVVETSQDMLALERSNAYHGSYHVLQGAISPLHGVNPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ RIE K+ E++ A + T+EG+TTA Y+ +LK + +++TRLA+GIP+GS+++++D
Sbjct: 126 LLMRIEQGKVEEVVIATNFTVEGETTALYLARQLKPLGIRVTRLAHGIPLGSDIEFVDPA 185
Query: 190 TIFEAIRSRTVL 201
T+ A++ R+ L
Sbjct: 186 TVQWAMKGRSEL 197
>gi|169633536|ref|YP_001707272.1| recombination protein, gap repair [Acinetobacter baumannii SDF]
gi|169796040|ref|YP_001713833.1| recombination protein, gap repair [Acinetobacter baumannii AYE]
gi|184158039|ref|YP_001846378.1| recombination protein RecR [Acinetobacter baumannii ACICU]
gi|213157226|ref|YP_002319271.1| recombination protein RecR [Acinetobacter baumannii AB0057]
gi|215483498|ref|YP_002325715.1| recombination protein RecR [Acinetobacter baumannii AB307-0294]
gi|239501842|ref|ZP_04661152.1| recombination protein RecR [Acinetobacter baumannii AB900]
gi|260554177|ref|ZP_05826435.1| recombinational DNA repair protein [Acinetobacter sp. RUH2624]
gi|260555082|ref|ZP_05827303.1| recombination protein RecR [Acinetobacter baumannii ATCC 19606]
gi|301345594|ref|ZP_07226335.1| recombination protein RecR [Acinetobacter baumannii AB056]
gi|301510305|ref|ZP_07235542.1| recombination protein RecR [Acinetobacter baumannii AB058]
gi|301597269|ref|ZP_07242277.1| recombination protein RecR [Acinetobacter baumannii AB059]
gi|332851690|ref|ZP_08433615.1| recombination protein RecR [Acinetobacter baumannii 6013150]
gi|332865935|ref|ZP_08436715.1| recombination protein RecR [Acinetobacter baumannii 6013113]
gi|332874499|ref|ZP_08442402.1| recombination protein RecR [Acinetobacter baumannii 6014059]
gi|169148967|emb|CAM86844.1| recombination protein, gap repair [Acinetobacter baumannii AYE]
gi|169152328|emb|CAP01250.1| recombination protein, gap repair [Acinetobacter baumannii]
gi|183209633|gb|ACC57031.1| Recombinational DNA repair protein (RecF pathway) [Acinetobacter
baumannii ACICU]
gi|193077319|gb|ABO12112.2| recombination protein gap repair [Acinetobacter baumannii ATCC
17978]
gi|213056386|gb|ACJ41288.1| recombination protein RecR [Acinetobacter baumannii AB0057]
gi|213986008|gb|ACJ56307.1| recombination protein RecR [Acinetobacter baumannii AB307-0294]
gi|260404683|gb|EEW98195.1| recombinational DNA repair protein [Acinetobacter sp. RUH2624]
gi|260411624|gb|EEX04921.1| recombination protein RecR [Acinetobacter baumannii ATCC 19606]
gi|322508358|gb|ADX03812.1| recR [Acinetobacter baumannii 1656-2]
gi|323517980|gb|ADX92361.1| recombination protein RecR [Acinetobacter baumannii TCDC-AB0715]
gi|332729697|gb|EGJ61032.1| recombination protein RecR [Acinetobacter baumannii 6013150]
gi|332734985|gb|EGJ66071.1| recombination protein RecR [Acinetobacter baumannii 6013113]
gi|332737343|gb|EGJ68267.1| recombination protein RecR [Acinetobacter baumannii 6014059]
Length = 198
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C ++
Sbjct: 6 FEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 66 EICDICASTERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+Y+D
Sbjct: 126 LIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|282859499|ref|ZP_06268604.1| recombination protein RecR [Prevotella bivia JCVIHMP010]
gi|282587727|gb|EFB92927.1| recombination protein RecR [Prevotella bivia JCVIHMP010]
Length = 202
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 126/190 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + + AM + + + C +C N+ T
Sbjct: 9 LEKAVNEFSQLPGIGRKTALRLVLHLLRQSTTQVDDFSNAMVEMKHNIKHCKVCHNISDT 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD +V+ VVE++ D+ A+E ++ N LYHVLGG +SP+D IGP D+ I+S
Sbjct: 69 DICPICSDARRDTTVVCVVENIQDVMAIENTQQFNGLYHVLGGIISPMDGIGPNDLEIES 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ +I+E+I A+++T+EG TT YI KLK DVK++ +A GI +G EL+Y D+
Sbjct: 129 LVERVRSGEIKEIILALASTMEGDTTNFYISRKLKEFDVKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSIINRT 198
>gi|89890633|ref|ZP_01202143.1| recombination DNA repair protein RecR [Flavobacteria bacterium
BBFL7]
gi|89517548|gb|EAS20205.1| recombination DNA repair protein RecR [Flavobacteria bacterium
BBFL7]
Length = 205
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 123/195 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E + ++++PG G R+A R LHL+++ L++A+ N+ + + C C
Sbjct: 2 NFSSKILEEAVNQVSQLPGIGKRTALRLVLHLMRQPASQTDALSQALTNLRHDLKFCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
NV D C IC RD +++ VVED+ D+ A+E + LYHVLGG +SP+D IGP+
Sbjct: 62 HNVSDVDICEICSSHNRDKTIVCVVEDIRDVMAIENTSQYRGLYHVLGGKISPMDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+SLIERI+ ++ELIFA+S TIEG TT YI +L G++V + +A GI +G EL
Sbjct: 122 DLNIKSLIERIQNDGVQELIFALSPTIEGDTTNFYIFKQLNGLEVNTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
++ D+ T+ +I R
Sbjct: 182 EFADEVTLGRSILHR 196
>gi|20141819|sp|Q9ZDA4|RECR_RICPR RecName: Full=Recombination protein recR
gi|292572052|gb|ADE29967.1| Recombination protein RecR [Rickettsia prowazekii Rp22]
Length = 199
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 124/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C ICGN+D
Sbjct: 5 NDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKCEICGNLD 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R P + +
Sbjct: 65 TKSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQNPRILRL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G ELDYLD
Sbjct: 125 PELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIGGELDYLD 184
Query: 188 DGTIFEAIRSR 198
+GT+ AI R
Sbjct: 185 EGTLSAAISLR 195
>gi|89094007|ref|ZP_01166951.1| recombination protein RecR [Oceanospirillum sp. MED92]
gi|89081681|gb|EAR60909.1| recombination protein RecR [Oceanospirillum sp. MED92]
Length = 199
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI L +PG GP+SA+R HL+++ LAEA+ +++ C +C + T
Sbjct: 7 IQQLITSLRCLPGVGPKSAQRMAFHLLERDPDGALALAEALQKSVSEIGHCKLCRTLSET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD+SV+ ++E D+ A+E++ N LY VL G LSP+D IGPED+GI
Sbjct: 67 EICDICSATDRDSSVLCILESPIDVLAVEQTGGFNGLYFVLSGHLSPIDGIGPEDLGIDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ I+ELI A + T+EG+ TAHYI ++K + VK++R+A+G+P+G EL+++D G
Sbjct: 127 LLERVQSSDIKELILATNPTVEGEATAHYIAAQVKDLGVKVSRIAHGVPVGGELEFVDGG 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLAHALAGRRSL 198
>gi|262372599|ref|ZP_06065878.1| recombination protein RecR [Acinetobacter junii SH205]
gi|262312624|gb|EEY93709.1| recombination protein RecR [Acinetobacter junii SH205]
Length = 198
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 124/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ E L++ L +P GP+SA+R LHL+ K + L+ A+ + + C IC ++
Sbjct: 4 ERFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALSYALHEASSHIHECRICHSLT 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +RD++++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 64 ENEICDICASTERDSNLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+ +I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+Y+D
Sbjct: 124 PYLVQRLSEGQIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVD 183
Query: 188 DGTIFEAIRSR 198
T+ +A+ +R
Sbjct: 184 SHTLSQAVHNR 194
>gi|319953940|ref|YP_004165207.1| recombination protein recr [Cellulophaga algicola DSM 14237]
gi|319422600|gb|ADV49709.1| Recombination protein recR [Cellulophaga algicola DSM 14237]
Length = 205
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 129/195 (66%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+K+ E+ L A+ + +++ CS C
Sbjct: 2 EFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPEEQTSHLTSALGKLRSQIKFCSNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + +RDA++I VVED+ D+ A+E + LYHVLGG +SP++ +GP+
Sbjct: 62 HNISDVALCEICANSKRDAAIICVVEDIRDVMAIENTGQFRGLYHVLGGKISPMECVGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+E+++ + ELIFA+S+T+EG TT YI +L+G+ VK + +A GI +G EL
Sbjct: 122 DLTIVSLVEKVKKGGVSELIFALSSTMEGDTTNFYIFKQLEGVTVKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSILNR 196
>gi|23336137|ref|ZP_00121364.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Bifidobacterium longum DJO10A]
gi|23465089|ref|NP_695692.1| recombination protein RecR [Bifidobacterium longum NCC2705]
gi|189440150|ref|YP_001955231.1| recombination protein RecR [Bifidobacterium longum DJO10A]
gi|227545630|ref|ZP_03975679.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622696|ref|ZP_04665727.1| recombination protein recR [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|312133495|ref|YP_004000834.1| recr [Bifidobacterium longum subsp. longum BBMN68]
gi|317483359|ref|ZP_07942351.1| recombination protein RecR [Bifidobacterium sp. 12_1_47BFAA]
gi|322688321|ref|YP_004208055.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
157F]
gi|322690331|ref|YP_004219901.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JCM 1217]
gi|73621468|sp|Q8G6Y1|RECR_BIFLO RecName: Full=Recombination protein recR
gi|229890128|sp|B3DUB4|RECR_BIFLD RecName: Full=Recombination protein recR
gi|23325702|gb|AAN24328.1| recombination protein RecR [Bifidobacterium longum NCC2705]
gi|189428585|gb|ACD98733.1| Recombinational DNA repair protein [Bifidobacterium longum DJO10A]
gi|227213746|gb|EEI81585.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514693|gb|EEQ54560.1| recombination protein recR [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291517613|emb|CBK71229.1| DNA replication and repair protein RecR [Bifidobacterium longum
subsp. longum F8]
gi|311772737|gb|ADQ02225.1| RecR [Bifidobacterium longum subsp. longum BBMN68]
gi|316915176|gb|EFV36606.1| recombination protein RecR [Bifidobacterium sp. 12_1_47BFAA]
gi|320455187|dbj|BAJ65809.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320459657|dbj|BAJ70277.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
157F]
Length = 200
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI R+PG GP+ A+R +++ E LAEA+ + K+ C ICGNV +
Sbjct: 9 IQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCDICGNVCES 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD SVI VVE+ D+ ++ER++ + LYHVLGG+++P+ +GP D+ I
Sbjct: 69 SPCPVCADPRRDRSVICVVEEPKDVMSIERTREYHGLYHVLGGAINPMANVGPADLRIPG 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E +++E+I A+ IEG+ T Y+ L+ + VK+TRLA G+P+GS+L+Y D+
Sbjct: 129 LLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVGSDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|281420173|ref|ZP_06251172.1| recombination protein RecR [Prevotella copri DSM 18205]
gi|281405668|gb|EFB36348.1| recombination protein RecR [Prevotella copri DSM 18205]
Length = 203
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 131/199 (65%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ++ + +E + +++PG G ++A R L ++K+K + + A+ ++ + +V C
Sbjct: 1 MQQQFSSTLLEKAVAEFSKLPGIGRKTALRLVLFMLKRKSEDVELFADTISRMRREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RDAS I VVE+V D+ A+E ++ + LYHVLGG +SP+D I
Sbjct: 61 RVCHNISDTDVCPICSDSRRDASTICVVENVQDVLAIENTQQFHGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I+SL++R+ ++E+IFA+S+T+EG TT YI KL VK++ +A GI +G
Sbjct: 121 GPSDIEIESLVQRVAEGGVKEVIFALSSTMEGDTTNFYISRKLADYPVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSILNRT 199
>gi|258593671|emb|CBE70012.1| Recombination protein recR [NC10 bacterium 'Dutch sediment']
Length = 199
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 126/187 (67%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI L R+PG GP++A+R T HL+K + LA+A+ + +++ C++C N+ +
Sbjct: 10 RLIGELVRLPGIGPKTAQRLTFHLLKAGREEAIALAQAIIELKDRIRSCAVCYNISEGEQ 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC+D RD SV+ VVE+ DLWA+E++ YHVLGGSLSPL+ GP+ + ++L+
Sbjct: 70 CPICVDPTRDGSVLCVVEEANDLWAIEKTATFKGRYHVLGGSLSPLEGRGPDQLTAKALL 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+E +++E+I A + +EG+ TA Y+ LK + V++TR+A G+PMGS+L+Y D+ T+
Sbjct: 130 QRLEGGEVKEVILATNPNVEGEATAMYLSRLLKPLAVRVTRIARGLPMGSDLEYADEVTL 189
Query: 192 FEAIRSR 198
+++ R
Sbjct: 190 SKSLEGR 196
>gi|293608165|ref|ZP_06690468.1| recombination protein recR [Acinetobacter sp. SH024]
gi|292828738|gb|EFF87100.1| recombination protein recR [Acinetobacter sp. SH024]
gi|325122105|gb|ADY81628.1| recombination protein, gap repair [Acinetobacter calcoaceticus
PHEA-2]
Length = 198
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C ++
Sbjct: 6 FEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 66 EICDICASTDRDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ I E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+Y+D
Sbjct: 126 LIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|291455831|ref|ZP_06595221.1| recombination protein RecR [Bifidobacterium breve DSM 20213]
gi|291382759|gb|EFE90277.1| recombination protein RecR [Bifidobacterium breve DSM 20213]
Length = 200
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI +PG GP+ A+R +++ E LAEA+ + KV C ICGNV T
Sbjct: 9 IQRLIDAFGHLPGIGPKGAQRIAFYMLSAPEDEARELAEAIEEVKAKVRFCEICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ +GP D+ I
Sbjct: 69 SPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVGPADLRIPG 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E +++E+I A+ IEG+ T Y+ L+ + VKITRLA G+P+GS+L+Y D+
Sbjct: 129 LLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKITRLASGLPVGSDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|188584659|ref|YP_001916204.1| DNA replication and repair protein RecR [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|229470330|sp|B2A302|RECR_NATTJ RecName: Full=Recombination protein recR
gi|179349346|gb|ACB83616.1| DNA replication and repair protein RecR [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 199
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I LI+ L+ +PG GP++A R H+V E + L A+ + +KV CS C N+
Sbjct: 6 KPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFECSTCNNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC D+ RD+++I VV+D D+ A+E+ + YHVL G +SP++ IGP+D+ +
Sbjct: 66 DKDPCTICQDESRDSNLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGIGPDDLNL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
++L++RI+ + I EL+ A T+EG+ TA Y+ +K + V++TRLAYG+PMG +L+Y D
Sbjct: 126 KALMDRIQGEGITELVVATDPTVEGEATAMYLNKLVKPLGVRVTRLAYGLPMGGDLEYAD 185
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +A R L
Sbjct: 186 EMTLQQAFEGRKEL 199
>gi|260590614|ref|ZP_05856072.1| recombination protein RecR [Prevotella veroralis F0319]
gi|260537439|gb|EEX20056.1| recombination protein RecR [Prevotella veroralis F0319]
Length = 202
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 135/197 (68%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + + +E ++ +++PG G ++A R LHL+++ + + +A+ ++ + + C +
Sbjct: 2 QQYSSQLLERAVEGFSQLPGVGRKTALRLVLHLLRQPVEEVESFTDAVTHVCHDIKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ TD C+IC D +RD+SV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IGP
Sbjct: 62 CHNISDTDICSICSDPRRDSSVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I SL+ER++ +++E+I A+++T+EG TT YI KLK DVK++ +A GI +G E
Sbjct: 122 HDLSIDSLVERVDTGEVKEVILALASTMEGDTTNFYISRKLKDKDVKLSIIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRT 199
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRT 198
>gi|254884038|ref|ZP_05256748.1| recombination protein recR [Bacteroides sp. 4_3_47FAA]
gi|254836831|gb|EET17140.1| recombination protein recR [Bacteroides sp. 4_3_47FAA]
Length = 206
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 130/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ ++ AM + ++V C
Sbjct: 2 MNQQYPSMLLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYC 61
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 62 KVCHNISDTETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGI 121
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G
Sbjct: 122 GPSDLQIESLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIG 181
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 182 DELEYTDEVTLGRSIINRTLF 202
>gi|302872972|ref|YP_003841605.1| recombination protein RecR [Clostridium cellulovorans 743B]
gi|307686513|ref|ZP_07628959.1| recombination protein RecR [Clostridium cellulovorans 743B]
gi|302575829|gb|ADL49841.1| recombination protein RecR [Clostridium cellulovorans 743B]
Length = 198
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ ++ + AEA+ + CSICGN T
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLHVLNLPKEEVSEFAEALVKARGTIKYCSICGNYTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC + R+ S+I VVE+ D+ A+E+ + N YHVL G++SP+ GP DI ++
Sbjct: 68 DPCSICSNPNRENSIICVVEEPKDIMAVEKVRDFNGTYHVLHGTISPMAGRGPNDINLKQ 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ I+E+I A +A +EG+ TA YI LK DVK+TR+A+G+PMG +L+Y D+
Sbjct: 128 LVSRMK-DNIKEIIVATNANVEGEATAMYISKILKPFDVKVTRIAHGLPMGGDLEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAKALEGR 195
>gi|150005488|ref|YP_001300232.1| recombination protein RecR [Bacteroides vulgatus ATCC 8482]
gi|237710673|ref|ZP_04541154.1| recombination protein recR [Bacteroides sp. 9_1_42FAA]
gi|237727063|ref|ZP_04557544.1| recombination protein recR [Bacteroides sp. D4]
gi|265750346|ref|ZP_06086409.1| recombination protein RecR [Bacteroides sp. 3_1_33FAA]
gi|294778690|ref|ZP_06744109.1| recombination protein RecR [Bacteroides vulgatus PC510]
gi|319640712|ref|ZP_07995426.1| recombination protein recR [Bacteroides sp. 3_1_40A]
gi|166221923|sp|A6L4J6|RECR_BACV8 RecName: Full=Recombination protein recR
gi|149933912|gb|ABR40610.1| recombination protein recR [Bacteroides vulgatus ATCC 8482]
gi|229433919|gb|EEO43996.1| recombination protein recR [Bacteroides dorei 5_1_36/D4]
gi|229455395|gb|EEO61116.1| recombination protein recR [Bacteroides sp. 9_1_42FAA]
gi|263237242|gb|EEZ22692.1| recombination protein RecR [Bacteroides sp. 3_1_33FAA]
gi|294447346|gb|EFG15927.1| recombination protein RecR [Bacteroides vulgatus PC510]
gi|317387674|gb|EFV68539.1| recombination protein recR [Bacteroides sp. 3_1_40A]
Length = 205
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 130/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ ++ AM + ++V C
Sbjct: 1 MNQQYPSMLLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G
Sbjct: 121 GPSDLQIESLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYTDEVTLGRSIINRTLF 201
>gi|327438118|dbj|BAK14483.1| recombinational DNA repair protein [Solibacillus silvestris
StLB046]
Length = 198
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R H++ KE + A+A+ + + CS CG++
Sbjct: 7 ISRLIDSFMKLPGIGPKTAARLAFHVLTMKEDTVSTFAKALVDAKRNLMYCSQCGHITDI 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+QRD S I VV+D D+ A+E+ + LYHVL G++SP+D +GPEDI + S
Sbjct: 67 DPCHICSDKQRDVSTICVVQDPKDVIAMEKMRDYQGLYHVLHGAISPMDGVGPEDINVAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A + TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+
Sbjct: 127 LLGRLHDERVQELILATNPTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|86606039|ref|YP_474802.1| recombination protein RecR [Synechococcus sp. JA-3-3Ab]
gi|123506557|sp|Q2JUS3|RECR_SYNJA RecName: Full=Recombination protein recR
gi|86554581|gb|ABC99539.1| recombination protein RecR [Synechococcus sp. JA-3-3Ab]
Length = 199
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG G ++A+R LHL+ + + LA+A+ V CSIC N
Sbjct: 4 RPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICFNWS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC QRD S VV DV DL A+ER++ LYHVLGG +SP++ IG E + I
Sbjct: 64 AEDPCEICRSPQRDPSTWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQLRI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSELDY 185
+ L+ R+ +K +ELIFA+S ++EG+ T H + D LK + +++TRLA+G+PMGSEL+Y
Sbjct: 124 RELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLKPVAPGLRMTRLAFGLPMGSELEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T+ A+ +R
Sbjct: 184 ADEVTLARALEAR 196
>gi|86610315|ref|YP_479077.1| recombination protein RecR [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500273|sp|Q2JH53|RECR_SYNJB RecName: Full=Recombination protein recR
gi|86558857|gb|ABD03814.1| recombination protein RecR [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 199
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 126/196 (64%), Gaps = 2/196 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG G ++A+R LHL+ + + LA+A+ V CSIC N
Sbjct: 4 RPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICFNWS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC QRD S+ VV DV DL A+ER++ LYHVLGG +SP++ IG + + I
Sbjct: 64 AEDPCEICRSPQRDPSLWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQLHI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSELDY 185
+ L+ R+ +K +ELIFAIS ++EG+ T H + D LK + +++TRLA+G+PMGSEL+Y
Sbjct: 124 RELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLKPVAPTLRMTRLAFGLPMGSELEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ +R L
Sbjct: 184 ADEVTLARALEARQEL 199
>gi|212694992|ref|ZP_03303120.1| hypothetical protein BACDOR_04529 [Bacteroides dorei DSM 17855]
gi|212662445|gb|EEB23019.1| hypothetical protein BACDOR_04529 [Bacteroides dorei DSM 17855]
Length = 198
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 127/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ AM + ++V C +C N+ T
Sbjct: 3 LEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYCKVCHNISDT 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 63 ETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGIGPSDLQIES 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G EL+Y D+
Sbjct: 123 LVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIGDELEYTDEV 182
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 183 TLGRSIINRTLF 194
>gi|92113584|ref|YP_573512.1| recombination protein RecR [Chromohalobacter salexigens DSM 3043]
gi|122420126|sp|Q1QXJ5|RECR_CHRSD RecName: Full=Recombination protein recR
gi|91796674|gb|ABE58813.1| recombination protein RecR [Chromohalobacter salexigens DSM 3043]
Length = 203
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG GP++A+R LHL+++ L A+ V C C + T
Sbjct: 7 VDQLLETLRVLPGVGPKTAQRMALHLLERDRDGGRRLVAALGEALEHVGYCQRCRTLAET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC D +RD ++ VVE AD+ A+E++ LY VL G LSPLD IGPEDIG+
Sbjct: 67 PLCSICEDARRDEGLLCVVESPADMLAIEQAGGFRGLYFVLHGHLSPLDGIGPEDIGLDQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ + E+I A + T+EG+ TAHYI ++L+G V+++RLAYG+PMG EL+Y+D G
Sbjct: 127 LDERLAGGSVEEVILATNPTVEGEATAHYIAEQLRGTGVRLSRLAYGVPMGGELEYVDGG 186
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 187 TLSRAFNGR 195
>gi|261338426|ref|ZP_05966310.1| recombination protein RecR [Bifidobacterium gallicum DSM 20093]
gi|270276402|gb|EFA22256.1| recombination protein RecR [Bifidobacterium gallicum DSM 20093]
Length = 200
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 125/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R HL+ ++ LA+A+ + +KV C ICGNV T
Sbjct: 9 IQRLIDAFASLPGIGPKGAQRIAFHLLSASDEEAQRLADAIEEVKHKVRFCEICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PCAIC D +RD ++I VVE+ D+ ++ER++ LYHVLGG+++P+ IGP D+ I +
Sbjct: 69 SPCAICSDPRRDHTMICVVEEPKDVMSIERTREYRGLYHVLGGTINPMANIGPNDLAIPA 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + E+I A++ IEG+ T Y+ L +++K+TRLA G+P+G++L+Y D+
Sbjct: 129 LLDRLKDDSVTEVIVALNPNIEGEATTTYLSRLLSPLEIKVTRLASGLPVGADLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLSRALMGR 197
>gi|262279000|ref|ZP_06056785.1| recombination protein RecR [Acinetobacter calcoaceticus RUH2202]
gi|262259351|gb|EEY78084.1| recombination protein RecR [Acinetobacter calcoaceticus RUH2202]
Length = 198
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C ++
Sbjct: 6 FEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +R+ ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IG+
Sbjct: 66 EICDICASTEREDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGVPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+Y+D
Sbjct: 126 LIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|332883359|gb|EGK03642.1| recombination protein recR [Dysgonomonas mossii DSM 22836]
Length = 207
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 129/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + A++PG G ++A R LHL+++ ++ A+A+ ++ ++V C
Sbjct: 1 MNQKYPSALLENAVNEFAKLPGIGRKTALRLILHLLRQDNAMVEGFAQALVSLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C N+ D C IC+D+ RDA+ I VVE++ ++ A+E + LYHVLGG +SP+D I
Sbjct: 61 NVCHNICDDDICPICLDKSRDAATICVVENIKEVMAIENTMQFKGLYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++E+I A+S T+EG TT YI KL D+K++ +A GI +G
Sbjct: 121 GPSDLEIDSLVTRVAKGDVKEIILALSTTMEGDTTNFYIYKKLSSFDIKVSMIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT+
Sbjct: 181 DEIEYADEVTLGRSILNRTLF 201
>gi|251794182|ref|YP_003008913.1| recombination protein RecR [Paenibacillus sp. JDR-2]
gi|247541808|gb|ACS98826.1| recombination protein RecR [Paenibacillus sp. JDR-2]
Length = 199
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A R H+++ KE + A+A+ ++ + CS+C N+ T
Sbjct: 7 IAKLIDAFTRLPGVGPKTAARLAFHVLRMKEDDVIDFAKALVSVKRNLTYCSVCCNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD SVI VV++ DL A+ER+K YHVL G++SP++ IGP+ I I
Sbjct: 67 DPCRICQDKTRDNSVICVVQESKDLVAMERTKEFQGFYHVLQGAISPIEGIGPDQIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++ELI A + IEG+ TA YI +K +++TR+A+G+P+G +L+Y D+
Sbjct: 127 LLRRLSDERVQELILATNPNIEGEATAMYISRLVKPFGIRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|169825653|ref|YP_001695811.1| recombination protein RecR [Lysinibacillus sphaericus C3-41]
gi|168990141|gb|ACA37681.1| Recombination protein RecR [Lysinibacillus sphaericus C3-41]
Length = 184
Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 122/180 (67%)
Query: 19 RIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQ 78
++PG GP++A R ++ KE+ + ++A+ + + CS+CGN+ DPC IC D+
Sbjct: 2 KLPGIGPKTAARLAFFVLSMKEEDVLSFSKALIDAKRNLSYCSVCGNITDVDPCHICTDK 61
Query: 79 QRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK 138
QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPEDI + SL+ R+ +
Sbjct: 62 QRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPEDINVASLLVRLHDES 121
Query: 139 IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 122 VQELILATNSTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEYADEVTLSKAMEGR 181
>gi|52078516|ref|YP_077307.1| recombination protein RecR [Bacillus licheniformis ATCC 14580]
gi|52783879|ref|YP_089708.1| recombination protein RecR [Bacillus licheniformis ATCC 14580]
gi|319648544|ref|ZP_08002759.1| recombination protein recR [Bacillus sp. BT1B_CT2]
gi|73621462|sp|Q65PJ9|RECR_BACLD RecName: Full=Recombination protein recR
gi|52001727|gb|AAU21669.1| DNA repair protein RecR [Bacillus licheniformis ATCC 14580]
gi|52346381|gb|AAU39015.1| RecR [Bacillus licheniformis ATCC 14580]
gi|317389392|gb|EFV70204.1| recombination protein recR [Bacillus sp. BT1B_CT2]
Length = 198
Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE ++ A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLSMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDIKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|294496895|ref|YP_003560595.1| recombination protein RecR [Bacillus megaterium QM B1551]
gi|295702262|ref|YP_003595337.1| recombination protein RecR [Bacillus megaterium DSM 319]
gi|294346832|gb|ADE67161.1| recombination protein RecR [Bacillus megaterium QM B1551]
gi|294799921|gb|ADF36987.1| recombination protein RecR [Bacillus megaterium DSM 319]
Length = 198
Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLSMKEDTVLDFAKALVNAKRNLTYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ+R+ +V+ VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI +
Sbjct: 67 DPCYICQDQRRERNVVCVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKVPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ +I+E+I A + IEG+ TA YI LK +KITR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDEIQEVILATNPNIEGEATAMYISRLLKPTGIKITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|260063519|ref|YP_003196599.1| recombination protein RecR [Robiginitalea biformata HTCC2501]
gi|88782963|gb|EAR14137.1| recombination protein recR [Robiginitalea biformata HTCC2501]
Length = 208
Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 130/195 (66%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+IT K + + ++++PG G R+A R LHL+++ + LAEA+ ++ + +C C C
Sbjct: 2 EITSKLLGKAVDEVSQLPGIGKRTALRLVLHLLRQPKARTEKLAEALTSLRSGICRCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ ++ C IC +RD S+I VVED+ D+ A+E + LYHVLGG +SP++ IGP+
Sbjct: 62 HNISDSERCEICASPKRDRSLICVVEDIRDIMAIESTGHYRGLYHVLGGKISPMEGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+ER+ +RELI A+SAT+EG TT Y+ +L+G++V+++ +A GIP+G +L
Sbjct: 122 DLQIASLVERVRDGGVRELILALSATMEGDTTNFYLYKQLEGVEVELSTIARGIPVGDDL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILQR 196
>gi|86131773|ref|ZP_01050370.1| recombination protein RecR [Dokdonia donghaensis MED134]
gi|85817595|gb|EAQ38769.1| recombination protein RecR [Dokdonia donghaensis MED134]
Length = 205
Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 126/195 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+++ E L EA+ + + + C C
Sbjct: 2 EFSSKLLENAVYEMSQLPGVGKRTALRLVLHLLRQPENQTHHLTEALNTMRDTIKFCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + RDAS++ VVEDV D+ A+E + LYHVLGG +SPLD +GP+
Sbjct: 62 HNISDVELCEICSNPNRDASLVCVVEDVRDVMAIENTSQYRGLYHVLGGKISPLDGVGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLI++ + +++E+IFA+S+T+EG TT YI +L+ D+K + +A GI +G EL
Sbjct: 122 DLNIYSLIDKAKSGEVKEVIFALSSTMEGDTTNFYIYRQLEAYDIKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILHR 196
>gi|288802015|ref|ZP_06407456.1| recombination protein RecR [Prevotella melaninogenica D18]
gi|288335450|gb|EFC73884.1| recombination protein RecR [Prevotella melaninogenica D18]
Length = 202
Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 129/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E ++ +++PG G ++A R LHL+++ + + A+A+ + + V C +C N+
Sbjct: 9 LERAVEAFSQLPGVGRKTALRLVLHLLRQSTEDVDSFADAVIRVKHDVKYCKVCHNISDN 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +RDASV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IGP D+ I+S
Sbjct: 69 EVCSICSDPRRDASVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIGPHDLEIES 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+E ++E+I A+++T+EG TT YI KLK VK++ +A GI +G EL+Y D+
Sbjct: 129 LVERVEEGTVKEVILALASTMEGDTTNFYISRKLKDTGVKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSILNRT 198
>gi|302347114|ref|YP_003815412.1| recombination protein RecR [Prevotella melaninogenica ATCC 25845]
gi|302151179|gb|ADK97440.1| recombination protein RecR [Prevotella melaninogenica ATCC 25845]
Length = 202
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 129/190 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E ++ +++PG G ++A R LHL+++ + + A+A+ + + V C +C N+
Sbjct: 9 LERAVEAFSQLPGVGRKTALRLVLHLLRQSTEDVDSFADAVIRVKHDVKYCKVCHNISDN 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +RDASV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IGP D+ I+S
Sbjct: 69 EVCSICSDPRRDASVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIGPHDLEIES 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+E ++E+I A+++T+EG TT YI KLK VK++ +A GI +G EL+Y D+
Sbjct: 129 LVERVEEGTVKEIILALASTMEGDTTNFYISRKLKDTGVKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSILNRT 198
>gi|296271479|ref|YP_003654111.1| recombination protein RecR [Thermobispora bispora DSM 43833]
gi|296094266|gb|ADG90218.1| recombination protein RecR [Thermobispora bispora DSM 43833]
Length = 199
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R H++ + LA+A+ + K+ C ICGNV T
Sbjct: 6 LQNLIDELGRLPGIGPKSAQRIAFHILGADPVDVKRLAQALLEVKEKIHFCRICGNVATE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD VI VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D+ I+
Sbjct: 66 DECLICRDPRRDDQVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMARLADGQVNELILATDPNLEGEATATYLARLVKPLGIKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|224024429|ref|ZP_03642795.1| hypothetical protein BACCOPRO_01154 [Bacteroides coprophilus DSM
18228]
gi|224017651|gb|EEF75663.1| hypothetical protein BACCOPRO_01154 [Bacteroides coprophilus DSM
18228]
Length = 226
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ + + + AM + ++V C
Sbjct: 22 MNQQYPSALLEKAVGEFAKLPGIGRKTAMRLVLHLLRQSTESVEAFSSAMVTLKHEVKYC 81
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 82 KVCHNISDTDICRICSNPSRDASTVCVVENIRDVMAVENTQQYKGLYHVLGGVISPMDGI 141
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++E+I A+S+T+EG TT +I KL G DVK+T +A GI +G
Sbjct: 142 GPSDLQIDSLVARVRSGAVKEVILALSSTMEGDTTNFFIYRKLSGFDVKLTVIARGISIG 201
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +R
Sbjct: 202 DELEYTDEVTLGRSIVNRVAF 222
>gi|229542241|ref|ZP_04431301.1| recombination protein RecR [Bacillus coagulans 36D1]
gi|229326661|gb|EEN92336.1| recombination protein RecR [Bacillus coagulans 36D1]
Length = 198
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L++ ++PG GP++A R ++ KE + A+A+ + + CS+CG++ T
Sbjct: 7 ITKLMESFMKLPGIGPKTAARLAFFVLDMKEDSVLAFAKALVDAKRDLTYCSVCGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD SVI VVE+ D+ A+E+ K N LYHVL G++SP+D IGPEDI +
Sbjct: 67 DPCYICADPRRDRSVICVVEEPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDISVPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLRDETVQEVILATNPNIEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|269925418|ref|YP_003322041.1| recombination protein RecR [Thermobaculum terrenum ATCC BAA-798]
gi|269789078|gb|ACZ41219.1| recombination protein RecR [Thermobaculum terrenum ATCC BAA-798]
Length = 199
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + +E LI+ +++PG GP++A R T L++ ++ LA+A+ + K LCS C N
Sbjct: 4 TAEPVERLIEEFSKLPGIGPKTASRLTYWLLRSSKEQAESLADAIRELKEKTTLCSECFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD SVI VVE+ D+ A+E + LYHVL G LSPLD I P+ +
Sbjct: 64 ITDVDPCRICSSESRDRSVICVVEEPLDVRAIENTNEYKGLYHVLHGLLSPLDGITPDKL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+Q L +R+ ++E+I A + T+EG TA YI LK ++VKITRLAYG+P+G +L+Y
Sbjct: 124 KLQELKDRVARGGVKEVIIATNPTLEGSNTAFYIARLLKNLNVKITRLAYGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T+ A++ R
Sbjct: 184 ADEVTLSRALQGR 196
>gi|210623908|ref|ZP_03294117.1| hypothetical protein CLOHIR_02068 [Clostridium hiranonis DSM 13275]
gi|210153272|gb|EEA84278.1| hypothetical protein CLOHIR_02068 [Clostridium hiranonis DSM 13275]
Length = 200
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 130/195 (66%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ + I LI+ +++PG G ++A+R H+V + LA+A+ + ++ CSIC
Sbjct: 3 QVYTEPITRLIEEFSKLPGVGRKTAQRLAFHVVNMNNNDVEALAKAIVDAKREIRYCSIC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ TDPC++C ++ RD SVI VVED D+ A+ER+K N LYHVL G +SP+D +GP+
Sbjct: 63 CNITDTDPCSMCSNKNRDKSVICVVEDPRDVAAMERTKDYNGLYHVLHGVISPMDGVGPD 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I I+ L+ R+ + ++E+I A + T+EG+ TA YI +K + +K+TR+A+G+P+G +L
Sbjct: 123 MIKIKELLVRLSNQDVKEIIMATNPTVEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDL 182
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ TI +A+ R
Sbjct: 183 EYADEVTISKALEGR 197
>gi|326336172|ref|ZP_08202344.1| recombination protein R [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691681|gb|EGD33648.1| recombination protein R [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 202
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 124/195 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++++PG G R+A R LHL+K+ + LA ++ N++ C C
Sbjct: 2 NFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPNGQVEQLANSLVRFRNEITYCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC RD SVI VVEDV D+ A+E + N LYHVLGG +SP+D IGP
Sbjct: 62 HNISDTEICEICASFNRDPSVICVVEDVRDVMAIENTGQYNGLYHVLGGRISPIDGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+++ + ++E+IFA+S T+EG TT YI +L+G+D+ I+ +A GI +G EL
Sbjct: 122 ELHIASLVKKAKEGTVKEIIFALSNTMEGDTTNFYIFKQLEGLDITISTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I R
Sbjct: 182 EYTDEVTLGRSILHR 196
>gi|212637868|ref|YP_002314388.1| recombination protein RecR [Anoxybacillus flavithermus WK1]
gi|226737870|sp|B7GFF3|RECR_ANOFW RecName: Full=Recombination protein recR
gi|212559348|gb|ACJ32403.1| Recombinational DNA repair protein RecR [Anoxybacillus flavithermus
WK1]
Length = 198
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE ++ A+A+ N + CS CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLNMKEDVVLDFAKALVNAKRNLTYCSSCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD S+I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICEDDKRDRSIICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + ++E+I A + IEG+ TA YI LK VKITR+A+G+P+G +L+Y D+
Sbjct: 127 LLRRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGVKITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|95928307|ref|ZP_01311055.1| recombination protein RecR [Desulfuromonas acetoxidans DSM 684]
gi|95135578|gb|EAT17229.1| recombination protein RecR [Desulfuromonas acetoxidans DSM 684]
Length = 199
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L + PG G ++A R H++++ E+ L EA+ N+ +V CS C +V
Sbjct: 8 LNRLIVELGKFPGIGRKTATRLAFHVMQQSEEQSQALVEAIQNLKQRVRFCSTCFHVTEQ 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C RD S++ VVE DL A+ER + YHVL G LSPLD +GP+D+ I
Sbjct: 68 DPCVLCTSTSRDDSLLCVVEQPQDLMAIERGHSYRGRYHVLHGVLSPLDGVGPDDLKIAE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ E+I A + +IEG+ TA Y+ L+ V+ITRLA+GIPMGS+L+Y+DD
Sbjct: 128 LVERVRQGNFNEVIVATNFSIEGEATALYLSRLLQPFGVRITRLAHGIPMGSDLEYVDDA 187
Query: 190 TIFEAIRSR 198
T+ AI R
Sbjct: 188 TVGRAIEGR 196
>gi|311028954|ref|ZP_07707044.1| recombination protein RecR [Bacillus sp. m3-13]
Length = 198
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFFVLNMKEDTVLDFAKALVNAKRNLSYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD ++I VV++ D+ A+E+ + N LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDNRRDRTIICVVQETKDVIAMEKMRDYNGLYHVLHGAISPMDGIGPEDIKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ +++ELI A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LIKRLQDDEVQELILATNPNIEGEATAMYISRLLKPSGIKMTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|262375229|ref|ZP_06068462.1| recombination protein RecR [Acinetobacter lwoffii SH145]
gi|262309483|gb|EEY90613.1| recombination protein RecR [Acinetobacter lwoffii SH145]
Length = 198
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +P GP+SA+R LH++ K + LA A+ N + CS+C ++
Sbjct: 6 FDQLVQALRILPSVGPKSAQRMALHMIMKNREGAIGLAHALTEATNYIHECSVCHSLTED 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 66 EVCNICTSLDRDDELLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPY 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +++E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+Y+D
Sbjct: 126 LLHRLANGQVKEVILATNATVEGQATAHYLVEASKHLPIQMTRIAQGVPQGGELEYVDSH 185
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 186 TLSQAVHNR 194
>gi|157413568|ref|YP_001484434.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9215]
gi|172047295|sp|A8G5G7|RECR_PROM2 RecName: Full=Recombination protein recR
gi|157388143|gb|ABV50848.1| RecR protein [Prochlorococcus marinus str. MIT 9215]
Length = 201
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + +EA+ ++ V C C N+
Sbjct: 8 KPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSEALLEAHSNVGRCKKCFNLT 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC + QR+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + I
Sbjct: 68 SEDECEICKNTQRNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEI 127
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ +I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 128 RSLVERVSKSEIDEIILALTPSVEGDTTSLYI-GKLLAPFTKVTRIAYGLPMGSELEYVD 186
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 187 EVTLARALEGRTNL 200
>gi|313203551|ref|YP_004042208.1| DNA replication and repair protein recr [Paludibacter
propionicigenes WB4]
gi|312442867|gb|ADQ79223.1| DNA replication and repair protein RecR [Paludibacter
propionicigenes WB4]
Length = 207
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 128/196 (65%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +EN + A++PG G ++A R LHL+K+ E + +A + +++ C++
Sbjct: 4 QQFSSSLLENAVNEFAKLPGIGRKTALRLVLHLLKQSEYEVEVFGKAFIQLRSEIQYCTV 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ T+ C IC + RD + VVE++ D+ ++E ++ LYHVLGG +SP+D +GP
Sbjct: 64 CHNISDTEICQICSNPSRDHETVCVVENIKDVMSIENTQQFRGLYHVLGGIISPMDGVGP 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+D+ I+SLIER++ + ++E+I A+S T+EG TT YI KL +++KIT +A GI +G E
Sbjct: 124 KDLEIESLIERVQTENVKEVILALSTTMEGDTTNFYIFRKLAPLNIKITTIARGIAIGDE 183
Query: 183 LDYLDDGTIFEAIRSR 198
L+Y D+ T+ +I +R
Sbjct: 184 LEYADEVTLGRSILNR 199
>gi|149182695|ref|ZP_01861162.1| recombination protein RecR [Bacillus sp. SG-1]
gi|148849605|gb|EDL63788.1| recombination protein RecR [Bacillus sp. SG-1]
Length = 198
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N K+ CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAARLAFFVLGMKEDTVLEFAKALVNAKRKLTYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD S++ VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI +
Sbjct: 67 DPCYICEDTRRDRSIVCVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDINVPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + + E+I A + IEG+ TA YI LK ++ TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDEGVEEVILATNPNIEGEATAMYISRLLKPSGIRTTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|260893958|ref|YP_003240055.1| recombination protein RecR [Ammonifex degensii KC4]
gi|260866099|gb|ACX53205.1| recombination protein RecR [Ammonifex degensii KC4]
Length = 198
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 123/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG G R+A+R +L+ + LAEA+ K CS+CGN
Sbjct: 5 RPLARLIEELKRLPGIGSRTAQRLAFYLLSAPPEEALRLAEAIKEAREKTFYCSVCGNFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC+IC D +RD +I VVE D+ A+ER+ +YHVL G LSPLD +GP+ + I
Sbjct: 65 DIDPCSICSDARRDKGIICVVEMPRDVVAIERAGCFKGVYHVLHGVLSPLDGVGPDKLRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L++R++ ++RE+I A S+T EG+ TA Y+ LK ++VK++RLAYG+P+G+E++ D
Sbjct: 125 QELLQRLQEGEVREVILATSSTTEGEATALYLKRLLKPLEVKVSRLAYGLPVGAEIELAD 184
Query: 188 DGTIFEAIRSR 198
+ TI A+ R
Sbjct: 185 EETISRALEGR 195
>gi|332654895|ref|ZP_08420637.1| recombination protein RecR [Ruminococcaceae bacterium D16]
gi|332516238|gb|EGJ45846.1| recombination protein RecR [Ruminococcaceae bacterium D16]
Length = 200
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ A++PG G +SA+R H++ E A+A+ + + C +C N+
Sbjct: 8 LENLVEQFAKLPGVGVKSAQRLAFHVLSMPEDEAAAFAQAILTAKSTIHCCPVCQNLTQG 67
Query: 70 D-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ PC+IC +RDAS I VV D D+ A+ERS+ LYHVL G +SP++ +GP+D+ I+
Sbjct: 68 EGPCSICSSPRRDASTICVVADPKDVVAMERSREYQGLYHVLHGVISPMNHVGPDDLHIK 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
SL+ER+ + E+I A + EG+ TA Y+ L+ VK+TRLAYGIP+GS L+Y DD
Sbjct: 128 SLVERVSAGGVDEVIMATNPDTEGEATAMYLSRLLRPFGVKVTRLAYGIPVGSHLEYADD 187
Query: 189 GTIFEAIRSR 198
T+ A+ R
Sbjct: 188 ATLMRALEGR 197
>gi|18309029|ref|NP_560963.1| recombination protein RecR [Clostridium perfringens str. 13]
gi|110801227|ref|YP_694520.1| recombination protein RecR [Clostridium perfringens ATCC 13124]
gi|110802201|ref|YP_697399.1| recombination protein RecR [Clostridium perfringens SM101]
gi|168206161|ref|ZP_02632166.1| recombination protein RecR [Clostridium perfringens E str. JGS1987]
gi|168210524|ref|ZP_02636149.1| recombination protein RecR [Clostridium perfringens B str. ATCC
3626]
gi|168213990|ref|ZP_02639615.1| recombination protein RecR [Clostridium perfringens CPE str. F4969]
gi|168217759|ref|ZP_02643384.1| recombination protein RecR [Clostridium perfringens NCTC 8239]
gi|169343382|ref|ZP_02864386.1| recombination protein RecR [Clostridium perfringens C str. JGS1495]
gi|182625381|ref|ZP_02953154.1| recombination protein RecR [Clostridium perfringens D str. JGS1721]
gi|20139456|sp|Q8XPB8|RECR_CLOPE RecName: Full=Recombination protein recR
gi|122959143|sp|Q0TV20|RECR_CLOP1 RecName: Full=Recombination protein recR
gi|123047626|sp|Q0SWS6|RECR_CLOPS RecName: Full=Recombination protein recR
gi|18143704|dbj|BAB79753.1| DNA repair and genetic recombination protein [Clostridium
perfringens str. 13]
gi|110675874|gb|ABG84861.1| recombination protein RecR [Clostridium perfringens ATCC 13124]
gi|110682702|gb|ABG86072.1| recombination protein RecR [Clostridium perfringens SM101]
gi|169298468|gb|EDS80554.1| recombination protein RecR [Clostridium perfringens C str. JGS1495]
gi|170662331|gb|EDT15014.1| recombination protein RecR [Clostridium perfringens E str. JGS1987]
gi|170711405|gb|EDT23587.1| recombination protein RecR [Clostridium perfringens B str. ATCC
3626]
gi|170714502|gb|EDT26684.1| recombination protein RecR [Clostridium perfringens CPE str. F4969]
gi|177909378|gb|EDT71830.1| recombination protein RecR [Clostridium perfringens D str. JGS1721]
gi|182380222|gb|EDT77701.1| recombination protein RecR [Clostridium perfringens NCTC 8239]
Length = 198
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++P G +SA+R TLH++ + + A A+ + CS+CGN T
Sbjct: 8 IEKLIEEFAKLPSIGKKSAQRLTLHILNLPKDEVEEFANALVKARGTIKYCSVCGNFTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + R+ +I VVE D+ +E+ K N LYHVL G++SP+ GP+DI I+
Sbjct: 68 DPCAICSNPNREKDIICVVEQPKDIMTMEKVKEFNGLYHVLHGTISPMQGRGPQDIRIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A + TIEG+ TA YI LK +DVK+TR+A GIP+G +L+Y D+
Sbjct: 128 LVARMS-GDVKEVIVATNPTIEGEATAMYISKILKPLDVKVTRIAAGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ RTV+
Sbjct: 187 TLSKALEGRTVI 198
>gi|258647975|ref|ZP_05735444.1| recombination protein RecR [Prevotella tannerae ATCC 51259]
gi|260851816|gb|EEX71685.1| recombination protein RecR [Prevotella tannerae ATCC 51259]
Length = 203
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 125/198 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ K +E + ++PG G R+A R LHL+K+ + + AE++ + K+ C
Sbjct: 1 MNEQYPSKHLERALNEFTKLPGIGRRTALRLVLHLLKQDKAYVNSFAESLIAVKEKIHYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+IC N+ TD C IC RD SV+ VVE+++ + ++E + A LYHVLGG +SP+D +
Sbjct: 61 NICHNISDTDICEICASPLRDQSVVCVVENISGVLSIENTGAFRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SLI+R+ +++E+IFA++ T+EG TT +I KL +VK+T LA G+ +G
Sbjct: 121 GPSDLEIDSLIDRVASGEVKEIIFALNPTMEGDTTIFFIQRKLAQYNVKLTTLARGVSVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
EL+Y D+ T+ +I R
Sbjct: 181 EELEYTDEITLGRSITER 198
>gi|157691311|ref|YP_001485773.1| recombination protein RecR [Bacillus pumilus SAFR-032]
gi|194018063|ref|ZP_03056668.1| recombination protein RecR [Bacillus pumilus ATCC 7061]
gi|166918736|sp|A8FAE6|RECR_BACP2 RecName: Full=Recombination protein recR
gi|157680069|gb|ABV61213.1| recombination protein RecR [Bacillus pumilus SAFR-032]
gi|194010255|gb|EDW19832.1| recombination protein RecR [Bacillus pumilus ATCC 7061]
Length = 198
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ +E ++ A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLSMQEDVVLDFAKALVNAKRNLTYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDTRRDQSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDIKIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|323488474|ref|ZP_08093720.1| recombination protein RecR [Planococcus donghaensis MPA1U2]
gi|323397866|gb|EGA90666.1| recombination protein RecR [Planococcus donghaensis MPA1U2]
Length = 198
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L++ ++PG GP++A R ++ KE + A+A+ + + CS+CG++
Sbjct: 7 ISKLMESFMKLPGIGPKTAARLAFFVLGMKEDTVLDFAKALVDAKRNLSFCSVCGHITDV 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQQRD + I VV+D D+ A+E+ + LYHVL G++SP+D IGPEDI + S
Sbjct: 67 DPCHICQDQQRDRTTICVVQDPKDVIAMEKMRDYKGLYHVLQGAISPMDGIGPEDINVPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ +++ ELI A + TIEG+ TA YI ++ ++ TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDEEVEELILATNPTIEGEATAMYISRLVRPSGIRTTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|123968736|ref|YP_001009594.1| recombination protein RecR [Prochlorococcus marinus str. AS9601]
gi|166221953|sp|A2BRS6|RECR_PROMS RecName: Full=Recombination protein recR
gi|123198846|gb|ABM70487.1| RecR protein [Prochlorococcus marinus str. AS9601]
Length = 199
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + ++A+ +N V C C N+
Sbjct: 6 KPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSKALLEAHNNVGRCKKCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + I
Sbjct: 66 SEDECEICRNTERNQKLICVVSETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ +I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 126 RSLVERVSKSEIDEIILALTPSVEGDTTSLYI-GKLLSPFTKVTRIAYGLPMGSELEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLARALEGRTKL 198
>gi|281424030|ref|ZP_06254943.1| recombination protein RecR [Prevotella oris F0302]
gi|281401813|gb|EFB32644.1| recombination protein RecR [Prevotella oris F0302]
Length = 203
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 129/199 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +E + A++PG G +SA R L++++++ + + +A+ + ++V C
Sbjct: 1 MSDKYASALLEKAVSEFAKLPGIGRKSALRLVLYMLRREHEEVDAFGKAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RD + I VVE++ D+ A+E+++ N LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTDVCPICSDIRRDDTTICVVENIQDVMAVEKTQQYNGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I+SL+ER++ K++E+I A+S+T+EG TT YI KL V ++ +A GI +G
Sbjct: 121 GPNDIEIESLVERVKGGKVKEVILALSSTMEGDTTNFYISRKLAAYGVDVSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIINRT 199
>gi|255527110|ref|ZP_05393998.1| recombination protein RecR [Clostridium carboxidivorans P7]
gi|296187899|ref|ZP_06856292.1| recombination protein RecR [Clostridium carboxidivorans P7]
gi|255509212|gb|EET85564.1| recombination protein RecR [Clostridium carboxidivorans P7]
gi|296047520|gb|EFG86961.1| recombination protein RecR [Clostridium carboxidivorans P7]
Length = 198
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R T+H++ + + AEA+ + CSICGN +
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTIHVLNLPGEEVKEFAEALIKARGTIKYCSICGNFTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C + RD S I VVE D+ A+E+ K N +YHVL G++SP+ GPEDI ++
Sbjct: 68 DPCAVCSNPNRDKSTICVVEQPKDIIAIEKVKEFNGVYHVLHGNISPMAGRGPEDIKLKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI +++E+I A + IEG+ TA YI LK ++VK+TR+A+GIP+G +L+Y D+
Sbjct: 128 LIRRIN-GEVKEVIVATNPNIEGEATAMYISKVLKPLEVKVTRIAHGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +AI R
Sbjct: 187 TLAKAIEGR 195
>gi|325856054|ref|ZP_08171943.1| recombination protein RecR [Prevotella denticola CRIS 18C-A]
gi|325483726|gb|EGC86690.1| recombination protein RecR [Prevotella denticola CRIS 18C-A]
Length = 202
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E ++ +++PG G ++A R LHL+++ + AEA+ + + V C +C N+ +
Sbjct: 9 LERAVEAFSQLPGVGRKTALRLVLHLLRQPADEVDGFAEAIVRVKHDVKYCKVCHNISDS 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D +RDAS++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +GP D+ I S
Sbjct: 69 DVCSICSDPRRDASLVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGVGPHDLEIDS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++E+I A+++T+EG TT Y+ KLKG +VK++ +A GI +G EL+Y D+
Sbjct: 129 LVKRVDEGGVKEVILALASTMEGDTTNFYLSRKLKGKNVKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSILNRT 198
>gi|327313231|ref|YP_004328668.1| recombination protein RecR [Prevotella denticola F0289]
gi|326944473|gb|AEA20358.1| recombination protein RecR [Prevotella denticola F0289]
Length = 202
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 130/190 (68%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E ++ +++PG G ++A R LHL+++ + AEA+ + + V C +C N+ +
Sbjct: 9 LERAVEAFSQLPGVGRKTALRLVLHLLRQPADEVDGFAEAVVRVKHDVKYCKVCHNISDS 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D +RDAS++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +GP D+ I S
Sbjct: 69 DVCSICSDPRRDASLVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGVGPHDLEIDS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++E+I A+++T+EG TT Y+ KLKG +VK++ +A GI +G EL+Y D+
Sbjct: 129 LVKRVDEGGVKEVILALASTMEGDTTNFYLSRKLKGKNVKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSILNRT 198
>gi|282877375|ref|ZP_06286198.1| recombination protein RecR [Prevotella buccalis ATCC 35310]
gi|281300427|gb|EFA92773.1| recombination protein RecR [Prevotella buccalis ATCC 35310]
Length = 203
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 128/199 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + +++PG G ++A R LHL+++ + A A+A + +V C
Sbjct: 1 MEQQYPSVLLEKAVNEFSKLPGIGRKTALRLVLHLLRQSNSDVEQFASAIAKVKQEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ D C IC D +RD S+I VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 QVCHNISDEDVCPICSDPRRDTSLICVVENIQDVMAVENTQQFRGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + IQSL++R+E + E+I A+S+T+EG TT YI KL +DVK++ +A GI +G
Sbjct: 121 GPDQLEIQSLVQRVEQGGVSEVILALSSTMEGDTTNFYISRKLAPLDVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIVNRT 199
>gi|197124083|ref|YP_002136034.1| recombination protein RecR [Anaeromyxobacter sp. K]
gi|196173932|gb|ACG74905.1| recombination protein RecR [Anaeromyxobacter sp. K]
Length = 198
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+K LAR+PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 7 IARLVKELARLPGIGEKTAQRLAFHILKAGPGYAGDLAAAIAGVVRDVRLCSTCQTLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D +RDA + VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+
Sbjct: 67 DPCAICRDPERDARTLCVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D
Sbjct: 127 LLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQV 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLARALAGRREL 198
>gi|119505874|ref|ZP_01627939.1| recombination protein RecR [marine gamma proteobacterium HTCC2080]
gi|119458302|gb|EAW39412.1| recombination protein RecR [marine gamma proteobacterium HTCC2080]
Length = 204
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI+ L +PG GP+SA+R TLHL+++ Q L+ A++ +V C C N
Sbjct: 7 INDLIEALRCLPGVGPKSAQRMTLHLLERDRQGAETLSGALSQALERVGRCKSCRNFTEL 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RD +++ VVE D+ ALE++ + LY VL G LSP+D IGPEDIG+
Sbjct: 67 ELCELCSDPRRDHTLLCVVEAPGDVMALEQTASFRGLYFVLMGHLSPIDGIGPEDIGLDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER + IRE+I A + T+EG+ TA YI + + D+ ++R+A+G+P+G EL+YLD
Sbjct: 127 LEERFRSEAIREVILATNPTVEGEATAFYIAQRAQQEDIAVSRIAHGVPLGGELEYLDAS 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 187 TLAHALSGRTPL 198
>gi|325298171|ref|YP_004258088.1| Recombination protein recR [Bacteroides salanitronis DSM 18170]
gi|324317724|gb|ADY35615.1| Recombination protein recR [Bacteroides salanitronis DSM 18170]
Length = 206
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R L+L+++ Q + A+ + ++V C
Sbjct: 1 MNQQYPSALLEKAVDEFAKLPGIGRKTAMRLVLYLLRQDTQAVESFGNALIRLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTDVCQICSNPSRDASTICVVENIRDVMAIENTQQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ + E+I A+S+T+EG TT YI KL +VK+T +A GI +G
Sbjct: 121 GPSDLQIESLVERVKAGTVSEVILALSSTMEGDTTNFYIFRKLAPYNVKLTIIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +R V
Sbjct: 181 DELEYTDEVTLGRSIANRIVF 201
>gi|50954177|ref|YP_061465.1| recombination protein RecR [Leifsonia xyli subsp. xyli str. CTCB07]
gi|71648823|sp|Q6AGY5|RECR_LEIXX RecName: Full=Recombination protein recR
gi|50950659|gb|AAT88360.1| recombination protein RecR [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 198
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C ICGNV
Sbjct: 6 VQELIDELGRLPGIGPKSAQRIAFHILQTEAFDVTRLAEVLLEVRDKVRFCEICGNVSEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC D +RD ++I VVE+ D+ A+ER++ LYHVLGG++SP+D +GP+D+ I+
Sbjct: 66 ATCSICRDPRRDPALICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGVGPDDLRIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A +EG+ TA Y+ L ++V++TRLA G+P+G +L+Y D+
Sbjct: 126 LVQRLADGTVQEVIIATDPNLEGEATATYLSRLLTTLEVRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|315639688|ref|ZP_07894828.1| recombination protein R [Enterococcus italicus DSM 15952]
gi|315484649|gb|EFU75105.1| recombination protein R [Enterococcus italicus DSM 15952]
Length = 198
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A R H + K++++ A+++ ++ + CSICGN+
Sbjct: 7 IARLIASYMNLPGIGQKTATRLAFHTIDMKDEVVNEFAKSLLSVKRDLQFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE+ D+ A+E+ + + LYHVL G LSP++ GP+DI I +
Sbjct: 67 DPCEICADKTRDRSTILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPDDINIAA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ ++++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIQRLHNEEVKEVILATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|295402710|ref|ZP_06812652.1| recombination protein RecR [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109171|ref|YP_003987487.1| recombination protein RecR [Geobacillus sp. Y4.1MC1]
gi|294975241|gb|EFG50877.1| recombination protein RecR [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214272|gb|ADP72876.1| recombination protein RecR [Geobacillus sp. Y4.1MC1]
Length = 198
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ + + C+ICG++ T
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLTMKEDTVLEFAKALVDAKRNIRYCTICGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD + I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICKDERRDRTTICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDEAVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|254526541|ref|ZP_05138593.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9202]
gi|221537965|gb|EEE40418.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9202]
Length = 199
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N+
Sbjct: 6 KPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSKALLEAHSNVGRCKKCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC + QR+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + I
Sbjct: 66 SEDECEICKNTQRNQKLICVVSETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ +I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 126 RSLVERVSKSEIDEIILALTPSVEGDTTSLYI-GKLLAPFTKVTRIAYGLPMGSELEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLARALEGRTNL 198
>gi|86160053|ref|YP_466838.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-C]
gi|123496736|sp|Q2IFP4|RECR_ANADE RecName: Full=Recombination protein recR
gi|85776564|gb|ABC83401.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-C]
Length = 198
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+K LA++PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 7 IARLVKELAKLPGIGEKTAQRLAFHILKAGAGYAGDLAAAIAGVVRDVRLCSTCQTLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D +RDA +I VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+
Sbjct: 67 DPCAICRDPERDARMICVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D
Sbjct: 127 LLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQV 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLARALAGRREL 198
>gi|56961821|ref|YP_173543.1| recombination protein RecR [Bacillus clausii KSM-K16]
gi|73621463|sp|Q5WLZ3|RECR_BACSK RecName: Full=Recombination protein recR
gi|56908055|dbj|BAD62582.1| recombinational DNA repair protein RecR [Bacillus clausii KSM-K16]
Length = 199
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 125/195 (64%), Gaps = 1/195 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ I LI+ R+PG GP++A R H++ KE + A+A+ + + CS C N+
Sbjct: 5 RPIAKLIEGFTRLPGIGPKTASRLAFHVLDMKEDDVLEFAKALVHAKRDLTYCSQCHNIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPC IC D+ RD + I VV++ DL A+E+ + LYHVL G++SP+D IGPEDI I
Sbjct: 65 DTDPCQICEDKHRDRTTICVVQESRDLIAMEKMREYTGLYHVLHGAISPMDGIGPEDIKI 124
Query: 128 QSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
LI+R++ + ++E+I A + TIEG+ TA YI +K +K+TRLA+G+P+G +L+Y
Sbjct: 125 AELIKRLQDDESVKEVIVATNPTIEGEATAMYISRLIKPTGIKVTRLAHGLPVGGDLEYA 184
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +AI R L
Sbjct: 185 DEVTLSKAIEGRREL 199
>gi|239825605|ref|YP_002948229.1| recombination protein RecR [Geobacillus sp. WCH70]
gi|259563698|sp|C5D347|RECR_GEOSW RecName: Full=Recombination protein recR
gi|239805898|gb|ACS22963.1| recombination protein RecR [Geobacillus sp. WCH70]
Length = 198
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+++ ++ + C++CG++ T
Sbjct: 7 ISKLIDSFMKLPGIGPKTAIRLAFFVLTMKEDTVLEFAKSLVDVKRNIRYCTVCGHITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD + I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICKDERRDRTTICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDEAVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|147676388|ref|YP_001210603.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum
SI]
gi|229470332|sp|A5D6B3|RECR_PELTS RecName: Full=Recombination protein recR
gi|146272485|dbj|BAF58234.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum
SI]
Length = 200
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 127/191 (66%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI+ LAR+PG GP++A+R +L+ ++ LA A+ V CS+CGN+
Sbjct: 6 KPVARLIEQLARLPGIGPKTAQRLAFYLLNAPLEVALNLARAVEEARQAVRYCSVCGNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPC IC D +R ++ VVE D+ ALE+++ LYHVL GS+SP++ IGPE + I
Sbjct: 66 DTDPCFICGDDRRRRDLLCVVERPRDVVALEKARVFKGLYHVLHGSISPVEGIGPEQLRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L++R+E +RE+I A + T+EG+TTA Y+ +K + V +TR+A+G+P+G++L+Y D
Sbjct: 126 RELLKRLEGGTVREVILATNPTVEGETTALYLAGLIKPLGVSVTRIAHGLPVGADLEYAD 185
Query: 188 DGTIFEAIRSR 198
+ T+ +A+ R
Sbjct: 186 EMTLSKALEGR 196
>gi|300727718|ref|ZP_07061104.1| recombination protein RecR [Prevotella bryantii B14]
gi|299775006|gb|EFI71612.1| recombination protein RecR [Prevotella bryantii B14]
Length = 203
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 128/199 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K+ + +E + +R+PG G +++ R LH++++ + + A++++ +V C
Sbjct: 1 MEKQYPSRLLEKAVSEFSRLPGIGRKTSLRLVLHMLRQTNEDVDGFVSAISHLKKEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RDAS + VVE++ D+ A+E ++ + LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTDVCPICSDPRRDASTVCVVENIQDVMAIENTQQYHGLYHVLGGIISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SLI R+ + E+IFA+S+T+EG TT +I KL VK++ +A GI +G
Sbjct: 121 GPADIEIDSLINRVAEGHVEEIIFALSSTMEGDTTNFFISRKLADFPVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSILNRT 199
>gi|225012671|ref|ZP_03703106.1| recombination protein RecR [Flavobacteria bacterium MS024-2A]
gi|225003204|gb|EEG41179.1| recombination protein RecR [Flavobacteria bacterium MS024-2A]
Length = 206
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 126/194 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN ++ +A++PG G R+A R LHL+K+ + LA+A+ ++ + C C
Sbjct: 3 FSSKLLENAVQEIAQLPGIGRRTALRLALHLLKQPVEHTQSLAKALTSLREGIIFCDRCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC +R+ S++ VVED+ D+ A+E + N LYHVLGG +SP+D IGP+D
Sbjct: 63 NLSDAPTCEICSSPKRNKSILCVVEDIRDVMAIENTGQYNGLYHVLGGIISPMDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+E+++ ++ ELIFA+SAT+E TT YI LK ++K + +A GIP+G EL+
Sbjct: 123 LTINSLLEKVKNNEVSELIFALSATMEADTTNFYIYKLLKPFEIKTSTIARGIPVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
+ D+ T+ +I +R
Sbjct: 183 FTDEVTLGRSILAR 196
>gi|330996287|ref|ZP_08320172.1| recombination protein RecR [Paraprevotella xylaniphila YIT 11841]
gi|329573479|gb|EGG55086.1| recombination protein RecR [Paraprevotella xylaniphila YIT 11841]
Length = 205
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ Q + +++ + + V C
Sbjct: 1 MNQQYPSVLLEKAVNEFAKLPGIGSKTAMRLVLHLLRQDVQAVESFGQSLITLKHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SIC N+ TD C IC D QRD S I VVE++ D+ A+E + +YHVLGG +SP+D +
Sbjct: 61 SICHNISDTDVCEICSDMQRDHSTICVVENIQDVMAIENTHQYKGVYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ +Q+L+ER+E +RE+I A+S T+EG TT YI KL+ + +I+ +A G+
Sbjct: 121 GPSDLQMQTLVERVEDGGVREVILALSPTMEGDTTNFYIYRKLENVAARISVIARGVAQN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +R V
Sbjct: 181 DELQYTDEVTLGRSIVNRVVF 201
>gi|297563730|ref|YP_003682704.1| recombination protein RecR [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848178|gb|ADH70198.1| recombination protein RecR [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 199
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R HL+ + + L A+ + KV CS+CGNV
Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFHLLSAEHADVKRLVSALVEVKEKVRFCSVCGNVAEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 DQCRICRDVRRDPAIICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGQVTELILATDPNLEGEATATYLARLVKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFEGRRSL 197
>gi|317476230|ref|ZP_07935481.1| recombination protein RecR [Bacteroides eggerthii 1_2_48FAA]
gi|316907641|gb|EFV29344.1| recombination protein RecR [Bacteroides eggerthii 1_2_48FAA]
Length = 205
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 126/190 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ A+ + ++V C +C N+ T
Sbjct: 10 LEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYCKVCYNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 70 ETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGIGPGDLEIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAAGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|153956409|ref|YP_001397174.1| recombination protein RecR [Clostridium kluyveri DSM 555]
gi|219856721|ref|YP_002473843.1| hypothetical protein CKR_3378 [Clostridium kluyveri NBRC 12016]
gi|189029357|sp|A5N3V7|RECR_CLOK5 RecName: Full=Recombination protein recR
gi|254790762|sp|B9DXI6|RECR_CLOK1 RecName: Full=Recombination protein recR
gi|146349267|gb|EDK35803.1| RecR [Clostridium kluyveri DSM 555]
gi|219570445|dbj|BAH08429.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 198
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ + A+A+ + CSICGN +
Sbjct: 8 IEKLIEEFAKLPGIGRKTAQRLTLHVLNLPADEVREFAKALVKARGTIKYCSICGNFTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I V+E+ D+ ++ER K N +YHVL G++SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRDKSIICVIEEPKDIMSMERIKEYNGVYHVLHGNISPMAGRGPEDIKLRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G L+Y D+
Sbjct: 128 LIRRIN-GDVNEVIVATNPNVEGEATAMYISKILKHLGVKVTRIAHGIPVGGNLEYADEV 186
Query: 190 TIFEAIRSRT 199
T+ +A+ RT
Sbjct: 187 TLLKALEGRT 196
>gi|325570728|ref|ZP_08146454.1| recombination protein R [Enterococcus casseliflavus ATCC 12755]
gi|325156574|gb|EGC68754.1| recombination protein R [Enterococcus casseliflavus ATCC 12755]
Length = 200
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + KE+++ A+++ ++ + CSICGN+
Sbjct: 9 IARLIDSYMKLPGIGQKTATRLAFYTIDMKEEVVNEFAKSLLSVKRDLHFCSICGNITEE 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 69 DPCEICSDPTRDKETILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDINIAS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 129 LIQRLHDDQVKEVIIATNATTEGEATAMYMSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 188
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 189 TLLKAVEGR 197
>gi|299142928|ref|ZP_07036055.1| recombination protein RecR [Prevotella oris C735]
gi|298575657|gb|EFI47536.1| recombination protein RecR [Prevotella oris C735]
Length = 203
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 128/199 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +E + A++PG G +SA R L++++++ + + +A+ + + V C
Sbjct: 1 MSDKYPSALLEKAVSEFAKLPGIGRKSALRLVLYMLRRENEEVDAFGKAITTLKHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RD + I VVE++ D+ A+E+++ N LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTDVCPICSDIRRDDTTICVVENIQDVMAVEKTQQYNGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I+SL+ER++ K++E+I A+S+T+EG TT YI KL V ++ +A GI +G
Sbjct: 121 GPNDIEIESLVERVKGGKVKEVILALSSTMEGDTTNFYISRKLAAYGVDVSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIINRT 199
>gi|257867901|ref|ZP_05647554.1| recombination protein recR [Enterococcus casseliflavus EC30]
gi|257874230|ref|ZP_05653883.1| recombination protein recR [Enterococcus casseliflavus EC10]
gi|257876794|ref|ZP_05656447.1| recombination protein recR [Enterococcus casseliflavus EC20]
gi|257801984|gb|EEV30887.1| recombination protein recR [Enterococcus casseliflavus EC30]
gi|257808394|gb|EEV37216.1| recombination protein recR [Enterococcus casseliflavus EC10]
gi|257810960|gb|EEV39780.1| recombination protein recR [Enterococcus casseliflavus EC20]
Length = 198
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + KE+++ A+++ ++ + CSICGN+
Sbjct: 7 IARLIDSYMKLPGIGQKTATRLAFYTIDMKEEVVNEFAKSLLSVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICSDPTRDKETILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDINIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIQRLHDDQVKEVIIATNATTEGEATAMYMSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|167772014|ref|ZP_02444067.1| hypothetical protein ANACOL_03388 [Anaerotruncus colihominis DSM
17241]
gi|167665812|gb|EDS09942.1| hypothetical protein ANACOL_03388 [Anaerotruncus colihominis DSM
17241]
Length = 199
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 119/190 (62%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI+ R+PG G +SA+R +++ A+A+ ++K+ CSIC ++ T+
Sbjct: 10 KLIEQFERLPGIGRKSAQRLAFYVLNLPRDKAQQFADAIVEAHDKIKKCSICQSLTETEV 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC DQ RDAS I VVE+ D+ A ER++ LYHVL G +SP+D IGPE + I+ L+
Sbjct: 70 CPICSDQSRDASTICVVENSQDVLAFERTREYKGLYHVLHGLISPMDGIGPEQLHIKELL 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
RI + E+I A + T+EG+ TA YI LK + V++TRLAYGIP+G L+Y D+ T+
Sbjct: 130 ARISAGGVDEVIMATNPTVEGEATAMYIARLLKPMGVRVTRLAYGIPVGGNLEYADEVTL 189
Query: 192 FEAIRSRTVL 201
F A+ R+ L
Sbjct: 190 FRALEGRSEL 199
>gi|332829165|gb|EGK01829.1| recombination protein recR [Dysgonomonas gadei ATCC BAA-286]
Length = 207
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + AR+PG G ++A R LHL+++ + ++ A+++ + ++V C
Sbjct: 1 MNQKYPSILLENAVNEFARLPGIGRKTALRLILHLLRQDDAMVDGFAQSLVALKHEVRYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C IC D+ RDA+ I VVE++ ++ A+E + YHVLGG +SP+D I
Sbjct: 61 KVCHNISDAEVCPICQDKSRDATTICVVENIKEVMAIENTMQFRGQYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER+ I E+I A+S T+EG TT YI KL DVK++ +A GI +G
Sbjct: 121 GPADLEIESLVERVSQGNINEIILALSTTMEGDTTNFYIYKKLAPYDVKVSMIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT+
Sbjct: 181 DEIEYADEVTLGRSILNRTLF 201
>gi|16077089|ref|NP_387902.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
168]
gi|221307830|ref|ZP_03589677.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
168]
gi|221312152|ref|ZP_03593957.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317085|ref|ZP_03598379.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321348|ref|ZP_03602642.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
SMY]
gi|296332938|ref|ZP_06875396.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305672719|ref|YP_003864390.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
str. W23]
gi|321313689|ref|YP_004205976.1| recombination protein RecR [Bacillus subtilis BSn5]
gi|585801|sp|P24277|RECR_BACSU RecName: Full=Recombination protein recR
gi|453239|emb|CAA34879.1| recR [Bacillus subtilis]
gi|467411|dbj|BAA05257.1| recombination protein [Bacillus subtilis]
gi|2632288|emb|CAB11797.1| DNA repair and recombination protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|291482391|dbj|BAI83466.1| recombination protein RecR [Bacillus subtilis subsp. natto BEST195]
gi|296149902|gb|EFG90793.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305410962|gb|ADM36080.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
str. W23]
gi|320019963|gb|ADV94949.1| recombination protein RecR [Bacillus subtilis BSn5]
Length = 198
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE ++ A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD SVI VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|305667757|ref|YP_003864044.1| recombination protein RecR [Maribacter sp. HTCC2170]
gi|88707594|gb|EAQ99836.1| recombination protein RecR [Maribacter sp. HTCC2170]
Length = 206
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 128/194 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++++PG G R+A R LHL+K+ + L+ A+ ++ N V C+ C
Sbjct: 3 FSSKLLENAVYEMSQLPGIGKRTALRLVLHLLKQPTEQTMKLSVALQDLRNTVKFCANCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC + +RD S++ VVED+ D+ A+E + LYHVLGG +SP++ +GP++
Sbjct: 63 NISDVELCEICANPKRDESIVCVVEDIRDVMAIENTGQFKGLYHVLGGKISPMEGVGPQE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ + + KI+E+IFA+S+T+EG TT YI +L+G+D+ + +A GI +G EL+
Sbjct: 123 LTISSLVSKAKEGKIKEMIFALSSTMEGDTTNFYIYKQLQGLDIATSTIARGIAIGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSILNR 196
>gi|225181515|ref|ZP_03734957.1| recombination protein RecR [Dethiobacter alkaliphilus AHT 1]
gi|225167763|gb|EEG76572.1| recombination protein RecR [Dethiobacter alkaliphilus AHT 1]
Length = 198
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 126/194 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + I LI+ L ++PG GP++A+R L L+ + +A +M + +K C ICG
Sbjct: 2 IYPEPISRLIESLQKLPGVGPKTAQRFALFLLSLPRDQVVAIARSMVDARDKTRYCRICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + C +C D++RD +VI VV+D D+ A+ER++ LYHVLGG++SP+D IGPE
Sbjct: 62 NFSDDETCTVCRDKRRDNTVICVVQDSRDVLAMERTREYKGLYHVLGGAISPMDGIGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ERI+ + RE+I A + +EG+ TA Y+ LK + +K+TR+A+G+P+G +L+
Sbjct: 122 LRMRELLERIKKGRAREVILATNPNVEGEATALYVARVLKPLGLKVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A+ R
Sbjct: 182 YADEVTLSRALEGR 195
>gi|167762859|ref|ZP_02434986.1| hypothetical protein BACSTE_01222 [Bacteroides stercoris ATCC
43183]
gi|167699199|gb|EDS15778.1| hypothetical protein BACSTE_01222 [Bacteroides stercoris ATCC
43183]
Length = 205
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 125/190 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ + A+ + ++V C +C N+ T
Sbjct: 10 LEKAVNEFAKLPGIGRKTAMRLVLHLLRQDTAAVEAFGNAIVTLKHEVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 70 ETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGIGPGDLEIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAAGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|269129056|ref|YP_003302426.1| recombination protein RecR [Thermomonospora curvata DSM 43183]
gi|268314014|gb|ACZ00389.1| recombination protein RecR [Thermomonospora curvata DSM 43183]
Length = 199
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R HL+ + LA+A+ + +KV C +CGNV
Sbjct: 6 VQNLIDELGRLPGIGPKSAQRIAFHLLAADPADVDRLAKALKEVKDKVRFCRVCGNVAEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+E+++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EECRICRDPRRDPAVICVVEESKDVVAIEKTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ELI A +EG+ TA Y+ +K +++K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLADGTVTELILATDPNLEGEATATYLARLVKPLNLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|291288273|ref|YP_003505089.1| recombination protein RecR [Denitrovibrio acetiphilus DSM 12809]
gi|290885433|gb|ADD69133.1| recombination protein RecR [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E + L+R+PG G ++A R LH++K + + LAE++ + K C ICGN+ T
Sbjct: 6 FERCVGELSRLPGIGRKTAARLALHILKADSEQVKSLAESLVELKEKTVFCKICGNMSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R+ S I VVE+ D++ LE + LYHVLGG +SPLD IGPED+ I+
Sbjct: 66 EVCHICTDGYRNRSQICVVEEAKDIYVLEATGFFRGLYHVLGGRISPLDGIGPEDLHIEE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R + + + E+I A + IEG+TTA Y+ LK ++K+T++A G+P+G+ L+Y D+
Sbjct: 126 LLKRAKAEDVSEIILATNPDIEGETTAIYLSKLLKKQNLKVTKIASGVPIGTNLEYTDEI 185
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 186 TLLKAMEQR 194
>gi|148241900|ref|YP_001227057.1| recombination protein RecR [Synechococcus sp. RCC307]
gi|172047803|sp|A5GS45|RECR_SYNR3 RecName: Full=Recombination protein recR
gi|147850210|emb|CAK27704.1| Recombination protein RecR [Synechococcus sp. RCC307]
Length = 215
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ R+PG GPR+A+R LHL+++ E+ A+A+ +V C CG++
Sbjct: 22 RPLARLIEQFERLPGIGPRTAQRLALHLLRQPEEQSRAFADALLAARQQVGQCQRCGHLS 81
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + +R+ VI VV D DL ALER++ + YHVLGG +SP+D IGPE +GI
Sbjct: 82 ADPICDICRNPERNIGVICVVADSRDLLALERTREFSGSYHVLGGLISPMDGIGPEALGI 141
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L++R++ +++ E+I A++ ++EG TT+ Y+ LK ++TR+AYG+P+GSEL+Y D
Sbjct: 142 QPLLQRLDPEQVEEVILALTPSVEGDTTSLYLARLLKPF-CRVTRIAYGLPVGSELEYAD 200
Query: 188 DGTIFEAIRSRTVL 201
D T+ A+ R ++
Sbjct: 201 DVTLARALEGRRIV 214
>gi|325104135|ref|YP_004273789.1| recombination protein RecR [Pedobacter saltans DSM 12145]
gi|324972983|gb|ADY51967.1| recombination protein RecR [Pedobacter saltans DSM 12145]
Length = 205
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 124/195 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN ++ +++PG G ++A R LHL+K + + ++ + + + C C
Sbjct: 2 NFSSKLLENAVEEFSKLPGVGKKTALRLVLHLLKNSSAEVHQFSNSLTTLKDNIKYCQKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC+ +RD+++I VVED D+ A+E + LYHVL G +SP+D IGP
Sbjct: 62 HNISDNNVCEICLSPKRDSTIICVVEDTRDVMAIENTHQYQGLYHVLNGLISPMDGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+SL+ERI+ +I+E+IFA+SAT+EG TT Y+ KLK ++KI+ +A GI G E+
Sbjct: 122 DLTIESLLERIKSGEIQEIIFALSATMEGDTTIFYLHKKLKDFNIKISTIARGIAFGGEI 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSIATR 196
>gi|218779846|ref|YP_002431164.1| recombination protein RecR [Desulfatibacillum alkenivorans AK-01]
gi|226738997|sp|B8FG16|RECR_DESAA RecName: Full=Recombination protein recR
gi|218761230|gb|ACL03696.1| recombination protein RecR [Desulfatibacillum alkenivorans AK-01]
Length = 199
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 125/190 (65%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NLIK L+++PG G ++A R LH+++ + LAE+++ V LCS+C + +DP
Sbjct: 10 NLIKQLSKLPGIGEKTAERLALHILRGSVKDAQALAESISEAKETVRLCSVCYGLADSDP 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D RD V+ VVE D+ ALE+S A YHVL G LSP++ +GP+++ I+ L+
Sbjct: 70 CHICRDATRDQDVVCVVEQGTDMVALEKSGAFKGRYHVLQGCLSPMNGVGPDNLRIRELV 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
ER++ +KI+E++ A ++EG++TA+Y+ L+G VKITR+A G+P+G +L Y D T+
Sbjct: 130 ERLKKEKIKEVVVATGTSVEGESTANYLRQVLEGSGVKITRIASGVPIGGDLKYTDALTL 189
Query: 192 FEAIRSRTVL 201
A+ SR L
Sbjct: 190 KRALDSRHCL 199
>gi|170780615|ref|YP_001708947.1| recombination protein RecR [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155183|emb|CAQ00283.1| putative recomination protein RecR [Clavibacter michiganensis
subsp. sepedonicus]
Length = 199
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C+ICGNV
Sbjct: 6 VQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAEVLTVVRDKVRFCAICGNVSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R + I VVE+ D+ A+ER++ LYHVLGG++SP+D IGP+D+ I+
Sbjct: 66 ETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGIGPDDLRIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + E+I A +EG+ TA Y+ L D+++TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLADATVTEVIIATDPNLEGEATATYLSRLLSTFDIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R ++
Sbjct: 186 TLGRAFEGRRLV 197
>gi|148272080|ref|YP_001221641.1| recombination protein RecR [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|172047219|sp|A5CPD8|RECR_CLAM3 RecName: Full=Recombination protein recR
gi|147830010|emb|CAN00938.1| putative recombination protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 199
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C+ICGNV
Sbjct: 6 VQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAEVLTVVRDKVRFCAICGNVSEK 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R + I VVE+ D+ A+ER++ LYHVLGG++SP+D IGP+D+ I+
Sbjct: 66 ETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGIGPDDLRIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + E+I A +EG+ TA Y+ L D+++TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLADATVTEVIIATDPNLEGEATATYLSRLLSTFDIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R ++
Sbjct: 186 TLGRAFEGRRLV 197
>gi|194333714|ref|YP_002015574.1| recombination protein RecR [Prosthecochloris aestuarii DSM 271]
gi|229470336|sp|B4S790|RECR_PROA2 RecName: Full=Recombination protein recR
gi|194311532|gb|ACF45927.1| recombination protein RecR [Prosthecochloris aestuarii DSM 271]
Length = 204
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 131/203 (64%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE+LI+ A++PG G ++A+R +H++ + + A A+ ++ KV C +C
Sbjct: 2 RYTSAAIESLIEEFAKLPGIGRKTAQRLAMHILHQHTDEVEKFASALIDVKQKVIHCRVC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPCAIC + RD SVI VVE +D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDIGADPCAICCAKGRDRSVICVVETPSDVLAFEKTGQYRGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DIG++ L+ R+ + ++ ELI A++ T+EG+TT YI LK + V++T++A GIP
Sbjct: 122 PDDIGVKELLSRLSPDDGPRVSELIMALNPTVEGETTVLYISKLLKPLGVQVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ R+ L
Sbjct: 182 VGAELEFVDEATLSRALEGRSAL 204
>gi|205371941|ref|ZP_03224760.1| recombination protein RecR [Bacillus coahuilensis m4-4]
gi|205372025|ref|ZP_03224843.1| recombination protein RecR [Bacillus coahuilensis m4-4]
Length = 198
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ITKLIDSFMKLPGIGPKTAARLAFFVLNMKEDTVLEFAKALVNAKRNLGYCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RDAS+I VV+D D+ A+E+ K YHVL G++SP++ IGPEDI +
Sbjct: 67 DPCYICQDDKRDASIICVVQDPKDVIAMEKMKEFRGKYHVLHGAISPMEGIGPEDINVPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++++E+I A + IEG+ TA YI LK ++ITR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQNEEVQEVILATNPNIEGEATAMYISRLLKPAGIRITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|218130919|ref|ZP_03459723.1| hypothetical protein BACEGG_02520 [Bacteroides eggerthii DSM 20697]
gi|217987263|gb|EEC53594.1| hypothetical protein BACEGG_02520 [Bacteroides eggerthii DSM 20697]
Length = 205
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 126/190 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ A+ + ++V C +C N+ T
Sbjct: 10 LEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 70 ETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGIGPGDLEIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAGGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|154684540|ref|YP_001419701.1| recombination protein RecR [Bacillus amyloliquefaciens FZB42]
gi|308171913|ref|YP_003918618.1| DNA repair and recombination protein [Bacillus amyloliquefaciens
DSM 7]
gi|166221921|sp|A7Z0E4|RECR_BACA2 RecName: Full=Recombination protein recR
gi|154350391|gb|ABS72470.1| RecR [Bacillus amyloliquefaciens FZB42]
gi|307604777|emb|CBI41148.1| DNA repair and recombination protein [Bacillus amyloliquefaciens
DSM 7]
gi|328551722|gb|AEB22214.1| recombination protein RecR [Bacillus amyloliquefaciens TA208]
gi|328909982|gb|AEB61578.1| Recombination protein recR [Bacillus amyloliquefaciens LL3]
Length = 198
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CSICG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD SVI VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|332529399|ref|ZP_08405360.1| recombination protein RecR [Hylemonella gracilis ATCC 19624]
gi|332041197|gb|EGI77562.1| recombination protein RecR [Hylemonella gracilis ATCC 19624]
Length = 196
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 117/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI L R+PG G RSA+R HL++ + LA A+ +V C+ C
Sbjct: 5 HSLDALIHALRRLPGVGQRSAQRMAFHLLQHDREGAQLLAGALQQAVAQVRHCARCHTFS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+ CA+C D RDAS + VVE AD ALER+ A LYHVL G LSPLD IGP+DIG+
Sbjct: 65 ETEICALCSDPARDASRLCVVETPADQMALERTGAYKGLYHVLMGRLSPLDGIGPKDIGL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R +RE+I A + T EG+ TAH I + +K V +TRLA G+P+GSEL+Y+D
Sbjct: 125 PALLARASDGTVREVIIATNFTGEGEATAHVIAEAMKSRGVAVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALADR 195
>gi|16124524|ref|NP_419088.1| recombination protein RecR [Caulobacter crescentus CB15]
gi|25398644|pir||D87282 recombination protein RecR [imported] - Caulobacter crescentus
gi|13421404|gb|AAK22256.1| recombination protein RecR [Caulobacter crescentus CB15]
Length = 152
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 102/149 (68%)
Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHV 109
MA KV C CG++D TDPCA+C D RD ++ VVE+V +WA+ER + YHV
Sbjct: 1 MAEAQAKVRTCGTCGSLDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHV 60
Query: 110 LGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVK 169
LGG LS LD IGPE + I L+ R+ + E+I A+ AT++GQTTAHYI D+L +V
Sbjct: 61 LGGLLSALDGIGPEALRIGELVGRVADGSVAEVILALPATVDGQTTAHYIADRLAKTNVP 120
Query: 170 ITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+T LA G+P+G +LD+LDDGTI +A+R+R
Sbjct: 121 VTMLARGVPVGGDLDWLDDGTIAQALRAR 149
>gi|311070668|ref|YP_003975591.1| recombination protein RecR [Bacillus atrophaeus 1942]
gi|310871185|gb|ADP34660.1| recombination protein RecR [Bacillus atrophaeus 1942]
Length = 198
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE ++ A+A+ N + CSICG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSICGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +RD S+I VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICEDTRRDKSIICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|171741490|ref|ZP_02917297.1| hypothetical protein BIFDEN_00575 [Bifidobacterium dentium ATCC
27678]
gi|283455170|ref|YP_003359734.1| recombination protein RecR [Bifidobacterium dentium Bd1]
gi|306823769|ref|ZP_07457143.1| recombination protein R [Bifidobacterium dentium ATCC 27679]
gi|309802080|ref|ZP_07696190.1| recombination protein RecR [Bifidobacterium dentium JCVIHMP022]
gi|171277104|gb|EDT44765.1| hypothetical protein BIFDEN_00575 [Bifidobacterium dentium ATCC
27678]
gi|283101804|gb|ADB08910.1| recombination protein RecR [Bifidobacterium dentium Bd1]
gi|304552767|gb|EFM40680.1| recombination protein R [Bifidobacterium dentium ATCC 27679]
gi|308221281|gb|EFO77583.1| recombination protein RecR [Bifidobacterium dentium JCVIHMP022]
Length = 200
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +++ ++ L +A+ + KV C ICGNV T
Sbjct: 9 IQRLIDAFAHLPGIGPKGAQRIAFYMLNASDEESQGLIDAITEVKEKVRFCEICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C+D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ + P D+ I
Sbjct: 69 SPCPVCVDPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVQPSDLNIAK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G +L+Y D+
Sbjct: 129 LIERLKDSEVKEVILALNPNVEGEATTSFLAQLLSQTDIKVTRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|239943047|ref|ZP_04694984.1| recombination protein RecR [Streptomyces roseosporus NRRL 15998]
gi|239989505|ref|ZP_04710169.1| recombination protein RecR [Streptomyces roseosporus NRRL 11379]
gi|291446523|ref|ZP_06585913.1| recombination protein recR [Streptomyces roseosporus NRRL 15998]
gi|291349470|gb|EFE76374.1| recombination protein recR [Streptomyces roseosporus NRRL 15998]
Length = 199
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCEVCGNVAQQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ERCGICRDARRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGSITELILATDPNLEGEATATYLARMVKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|289435977|ref|YP_003465849.1| Recombination protein recR [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172221|emb|CBH28767.1| Recombination protein recR [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 198
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 7 ITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC+D RD S+I VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICVDTSRDRSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ I E+I A + +EG+ TA YI LK +KITR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKAMEGR 195
>gi|163789127|ref|ZP_02183570.1| recombination protein RecR [Flavobacteriales bacterium ALC-1]
gi|159875540|gb|EDP69601.1| recombination protein RecR [Flavobacteriales bacterium ALC-1]
Length = 205
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 125/195 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + +A++PG G R+A R LHL+++ E L+EA++ + ++ C C
Sbjct: 2 EFSSKLLENAVNEMAQLPGIGKRTALRLVLHLLRQPENQTFQLSEALSKVRGEINFCKSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + R+ +I VVED+ D+ A+E + + LYHVLGG +SP+D IGP+
Sbjct: 62 HNISDKPLCEICENPNRNTQLICVVEDIRDVMAVENTSSFKGLYHVLGGKISPMDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+E+++ +++ELIFA+S T+EG TT YI +++ +V + +A G+ G+EL
Sbjct: 122 DLNIMSLVEKVKTGQVKELIFAMSPTMEGDTTNFYIFRQIQDYNVATSTIARGVAAGNEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I R
Sbjct: 182 EYTDEITLGRSIIDR 196
>gi|228473616|ref|ZP_04058368.1| recombination protein RecR [Capnocytophaga gingivalis ATCC 33624]
gi|228274988|gb|EEK13798.1| recombination protein RecR [Capnocytophaga gingivalis ATCC 33624]
Length = 202
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 127/194 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++++PG G R+A R LHL+K+ LA ++ ++ N++ C C
Sbjct: 3 FSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPPAQTERLAASLVSLVNEITYCKQCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C IC + RD+S++ VVEDV D+ A+E + N LYHVLGG +SP+D +GP +
Sbjct: 63 NISDTEICDICANIHRDSSLLCVVEDVRDVMAIENTGQYNGLYHVLGGKISPIDGVGPNE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+++++ ++E+IFA+S T+EG TT YI +L+G+D+ + +A GI +G EL+
Sbjct: 123 LTIASLVKKVKEGSVKEIIFALSNTMEGDTTNFYIYRQLEGLDITTSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I R
Sbjct: 183 YTDEVTLGRSILHR 196
>gi|126696542|ref|YP_001091428.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9301]
gi|166221952|sp|A3PDK2|RECR_PROM0 RecName: Full=Recombination protein recR
gi|126543585|gb|ABO17827.1| RecR protein [Prochlorococcus marinus str. MIT 9301]
Length = 199
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N+
Sbjct: 6 KPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIREFSKALLEAHSNVGRCKKCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + I
Sbjct: 66 SEDECEICRNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ +I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 126 RSLVERVSKSEIDEIILALTPSVEGDTTSLYI-GKLLAPFTKVTRIAYGLPMGSELEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLARALEGRTKL 198
>gi|255327657|ref|ZP_05368723.1| recombination protein RecR [Rothia mucilaginosa ATCC 25296]
gi|255295331|gb|EET74682.1| recombination protein RecR [Rothia mucilaginosa ATCC 25296]
Length = 380
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R H++ + LA A++ + V C CGNV T
Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECGNVSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D++RD SV+ VVE+ D+ A+ER+++ YHVLGG+++PL +GPE + I+
Sbjct: 66 KLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++I+E+I A+ +EG+ TA Y+ L + V+++RLA G+P+G +L+Y D+
Sbjct: 126 LVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R V+
Sbjct: 186 TLGRALEGRRVI 197
>gi|297193078|ref|ZP_06910476.1| recombination protein recR [Streptomyces pristinaespiralis ATCC
25486]
gi|197719792|gb|EDY63700.1| recombination protein recR [Streptomyces pristinaespiralis ATCC
25486]
Length = 199
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLAHALLEVKDKVRFCAVCGNVAQQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCNICRDPRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|283458782|ref|YP_003363424.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18]
gi|283134839|dbj|BAI65604.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18]
Length = 384
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R H++ + LA A++ + V C CGNV T
Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECGNVSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D++RD SV+ VVE+ D+ A+ER+++ YHVLGG+++PL +GPE + I+
Sbjct: 66 KLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++I+E+I A+ +EG+ TA Y+ L + V+++RLA G+P+G +L+Y D+
Sbjct: 126 LVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R V+
Sbjct: 186 TLGRALEGRRVI 197
>gi|294630548|ref|ZP_06709108.1| recombination protein RecR [Streptomyces sp. e14]
gi|292833881|gb|EFF92230.1| recombination protein RecR [Streptomyces sp. e14]
Length = 199
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCAVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ELCGICRDSRRDQSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|255319564|ref|ZP_05360777.1| recombination protein RecR [Acinetobacter radioresistens SK82]
gi|262379862|ref|ZP_06073018.1| recombination protein RecR [Acinetobacter radioresistens SH164]
gi|255303362|gb|EET82566.1| recombination protein RecR [Acinetobacter radioresistens SK82]
gi|262299319|gb|EEY87232.1| recombination protein RecR [Acinetobacter radioresistens SH164]
Length = 198
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 118/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + L++ L +P GP+SA+R LHL+ K + LA A+ + + C +C ++
Sbjct: 4 ERFDQLVQALRILPSVGPKSAQRMALHLLMKNREGASGLAHALNEATSYIHECKVCHSLT 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +RD + VVE AD+ A+E+S + YHVLGG LSPLD IGPE+IGI
Sbjct: 64 ENEVCDICASSERDEQQLCVVESPADVMAIEQSGSFKGKYHVLGGHLSPLDGIGPEEIGI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+ I E+I A +AT+EGQ TAHY+ + K + + +TR+A G+P G EL+Y+D
Sbjct: 124 PYLVRRLSEGHITEVILATNATVEGQATAHYLAEATKHLPLHLTRIAQGVPQGGELEYVD 183
Query: 188 DGTIFEAIRSR 198
T+ +A+ +R
Sbjct: 184 SHTLSQALHNR 194
>gi|329939343|ref|ZP_08288679.1| DNA modification/recombination protein [Streptomyces
griseoaurantiacus M045]
gi|329301572|gb|EGG45466.1| DNA modification/recombination protein [Streptomyces
griseoaurantiacus M045]
Length = 195
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV
Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCSVCGNVAQE 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 62 ERCAICRDARRDLAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 122 LLARLADGAVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 181
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 182 TLGRAFEGRRLL 193
>gi|332882336|ref|ZP_08449964.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679720|gb|EGJ52689.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 205
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ Q + +++ + + V C
Sbjct: 1 MNQQYPSVLLEKAVNEFAKLPGIGSKTAMRLVLHLLRQDVQAVESFGQSLITLKHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C N+ TD C IC D QRD S I VVE++ D+ A+E + +YHVLGG +SP+D +
Sbjct: 61 SVCHNISDTDVCEICSDMQRDHSTICVVENIQDVMAIENTHQYKGVYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ IQ+L+ER+E +RE+I A+S T+EG TT YI KL+ +I+ +A G+
Sbjct: 121 GPSDLQIQTLVERVEDGGVREVILALSPTMEGDTTNFYIYRKLENAAARISVIARGVAQN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +R V
Sbjct: 181 DELQYTDEVTLGRSIVNRVVF 201
>gi|282882934|ref|ZP_06291539.1| recombination protein RecR [Peptoniphilus lacrimalis 315-B]
gi|281297345|gb|EFA89836.1| recombination protein RecR [Peptoniphilus lacrimalis 315-B]
Length = 201
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ L R+PG GP++A+R H++ + + LA+++ I +KV CS+C N+ T
Sbjct: 8 IEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELADSIGTIKSKVKKCSLCCNISDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I VV+ D+ A+ER+ LYHVL G +SPL DI
Sbjct: 68 DPCNICQDNNRDKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFVE 127
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R+E K+I+E+I A S T++G TA ++++ LK D+K+TR+ YG+P+G +L+Y D+
Sbjct: 128 LIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYDE 187
Query: 189 GTIFEAIRSRTVL 201
TI A+++R L
Sbjct: 188 ITISAALKNRREL 200
>gi|21222034|ref|NP_627813.1| recombination protein RecR [Streptomyces coelicolor A3(2)]
gi|256786880|ref|ZP_05525311.1| recombination protein RecR [Streptomyces lividans TK24]
gi|289770774|ref|ZP_06530152.1| recombination protein RecR [Streptomyces lividans TK24]
gi|6685844|sp|Q9XAI4|RECR_STRCO RecName: Full=Recombination protein recR
gi|5748805|gb|AAD34032.2|AF151381_2 recombination protein RecR [Streptomyces coelicolor A3(2)]
gi|5123893|emb|CAB45485.1| putative recomination protein [Streptomyces coelicolor A3(2)]
gi|289700973|gb|EFD68402.1| recombination protein RecR [Streptomyces lividans TK24]
Length = 199
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C+ CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPVDVRRLAQALMEVKAKVRFCATCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D+ I+
Sbjct: 66 EQCNICRDTRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|229816761|ref|ZP_04447043.1| hypothetical protein BIFANG_02008 [Bifidobacterium angulatum DSM
20098]
gi|229785777|gb|EEP21891.1| hypothetical protein BIFANG_02008 [Bifidobacterium angulatum DSM
20098]
Length = 200
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI +++PG GP+ A+R +++ E+ LA+A+ + KV C +CGNV
Sbjct: 9 IQRLIDAFSKLPGIGPKGAQRIAFYILGSDEREAADLADAITEVKAKVKFCEVCGNVCEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C+D +RD S+I VVE+ D+ ++ER++ + LYHVLGG+++P+ +GP D+ I
Sbjct: 69 SPCPVCLDPRRDHSIICVVEEPKDVMSIERTREYHGLYHVLGGAINPMANVGPNDLNIAK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ + E+I A+ IEG+ T Y+ L + +K+TRLA G+P+GS+L+Y D+
Sbjct: 129 LLERLGDGSVTEVILALDPNIEGEATTTYLSRLLSQVGIKVTRLASGLPVGSDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALSGR 197
>gi|188588858|ref|YP_001922589.1| recombination protein RecR [Clostridium botulinum E3 str. Alaska
E43]
gi|251781258|ref|ZP_04824174.1| recombination protein RecR [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229890143|sp|B2V0W0|RECR_CLOBA RecName: Full=Recombination protein recR
gi|188499139|gb|ACD52275.1| recombination protein RecR [Clostridium botulinum E3 str. Alaska
E43]
gi|243081705|gb|EES47766.1| recombination protein RecR [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 198
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++P G ++A+R TLH++ + + A+A+ + CS CGN T
Sbjct: 8 IEKLIEEFAKLPSIGKKTAQRLTLHILNLPDDEVREFAKALVKAKGTIKYCSTCGNFTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C + RD S I VVE D+ +E+ K N LYHVL G++SP+ GP+DI I+
Sbjct: 68 DPCALCSNPNRDKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGPQDIKIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L+Y D+
Sbjct: 128 LVARMN-EEVKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|189500125|ref|YP_001959595.1| recombination protein RecR [Chlorobium phaeobacteroides BS1]
gi|229890139|sp|B3EQT3|RECR_CHLPB RecName: Full=Recombination protein recR
gi|189495566|gb|ACE04114.1| recombination protein RecR [Chlorobium phaeobacteroides BS1]
Length = 204
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 134/203 (66%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI+ A++PG G ++A+R ++H++++K + L+ A+ ++ KV CSIC
Sbjct: 2 RYTSTAIEALIEEFAKLPGIGRKTAQRLSMHILQEKPGEVEKLSRALTDVKEKVISCSIC 61
Query: 64 GNVDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC+IC + RD S I VVE D+ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNVTDRGDDPCSICRGKGRDLSKICVVESPPDVLAFEKTAQYRGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIEV---KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ R+ + +++ E+I A+S T+EG+TT Y+ LK + +++T++A GIP
Sbjct: 122 PDDIKVKELLARLSLQDGREVSEVIMALSPTVEGETTVLYVSRLLKPLGIEVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+Y+D+ T+ A+ R+VL
Sbjct: 182 VGAELEYIDEATLSRAMEGRSVL 204
>gi|297582362|ref|YP_003698142.1| recombination protein RecR [Bacillus selenitireducens MLS10]
gi|297140819|gb|ADH97576.1| recombination protein RecR [Bacillus selenitireducens MLS10]
Length = 198
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ ++PG GP++A R +++ E + A+A+ N ++ CS+C ++
Sbjct: 5 QPVTKLIEGFMKLPGIGPKTAARLAFYVLDMNEDDVLDFAKALVNAKRELTYCSVCHHIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPC IC DQ RD S+I VV+D D+ A+E+ + +YHVL G++SP+D IGPEDI I
Sbjct: 65 DTDPCRICDDQSRDRSIICVVQDAKDVIAMEKMREYTGMYHVLHGAISPVDGIGPEDIFI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R++ + ++ELI A + IEG+ TA YI +K +K+TR+A+G+P+G +L+Y D
Sbjct: 125 PDLLKRLQDETVQELIIATNPNIEGEATAMYISRLVKPTGMKVTRIAHGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI R L
Sbjct: 185 EMTLSRAIEGRREL 198
>gi|16804739|ref|NP_466224.1| recombination protein RecR [Listeria monocytogenes EGD-e]
gi|46908881|ref|YP_015270.1| recombination protein RecR [Listeria monocytogenes serotype 4b str.
F2365]
gi|47095509|ref|ZP_00233118.1| recombination protein RecR [Listeria monocytogenes str. 1/2a F6854]
gi|217966100|ref|YP_002351778.1| recombination protein RecR [Listeria monocytogenes HCC23]
gi|224499377|ref|ZP_03667726.1| recombination protein RecR [Listeria monocytogenes Finland 1988]
gi|224502888|ref|ZP_03671195.1| recombination protein RecR [Listeria monocytogenes FSL R2-561]
gi|226225254|ref|YP_002759361.1| recombination protein recR [Listeria monocytogenes Clip81459]
gi|254824933|ref|ZP_05229934.1| recombination protein RecR [Listeria monocytogenes FSL J1-194]
gi|254827267|ref|ZP_05231954.1| recombination protein RecR [Listeria monocytogenes FSL N3-165]
gi|254830862|ref|ZP_05235517.1| recombination protein RecR [Listeria monocytogenes 10403S]
gi|254851993|ref|ZP_05241341.1| recombination protein RecR [Listeria monocytogenes FSL R2-503]
gi|254899841|ref|ZP_05259765.1| recombination protein RecR [Listeria monocytogenes J0161]
gi|254912953|ref|ZP_05262965.1| recombination protein RecR [Listeria monocytogenes J2818]
gi|254931026|ref|ZP_05264385.1| recombination protein RecR [Listeria monocytogenes HPB2262]
gi|254937334|ref|ZP_05269031.1| recombination protein RecR [Listeria monocytogenes F6900]
gi|254993824|ref|ZP_05276014.1| recombination protein RecR [Listeria monocytogenes FSL J2-064]
gi|255025784|ref|ZP_05297770.1| recombination protein RecR [Listeria monocytogenes FSL J2-003]
gi|255520361|ref|ZP_05387598.1| recombination protein RecR [Listeria monocytogenes FSL J1-175]
gi|284800412|ref|YP_003412277.1| recombination protein RecR [Listeria monocytogenes 08-5578]
gi|284993598|ref|YP_003415366.1| recombination protein RecR [Listeria monocytogenes 08-5923]
gi|290891884|ref|ZP_06554881.1| recombination protein RecR [Listeria monocytogenes FSL J2-071]
gi|300763538|ref|ZP_07073536.1| recombination protein RecR [Listeria monocytogenes FSL N1-017]
gi|315283984|ref|ZP_07871984.1| recombination protein RecR [Listeria marthii FSL S4-120]
gi|20139467|sp|Q8Y3X7|RECR_LISMO RecName: Full=Recombination protein recR
gi|67461443|sp|Q71W69|RECR_LISMF RecName: Full=Recombination protein recR
gi|254790773|sp|B8DAT9|RECR_LISMH RecName: Full=Recombination protein recR
gi|259563700|sp|C1KZQ7|RECR_LISMC RecName: Full=Recombination protein recR
gi|16412202|emb|CAD00915.1| recR [Listeria monocytogenes EGD-e]
gi|46882154|gb|AAT05447.1| recombination protein RecR [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016119|gb|EAL07043.1| recombination protein RecR [Listeria monocytogenes str. 1/2a F6854]
gi|217335370|gb|ACK41164.1| recombination protein RecR [Listeria monocytogenes HCC23]
gi|225877716|emb|CAS06430.1| Putative recombination protein recR [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258599649|gb|EEW12974.1| recombination protein RecR [Listeria monocytogenes FSL N3-165]
gi|258605291|gb|EEW17899.1| recombination protein RecR [Listeria monocytogenes FSL R2-503]
gi|258609940|gb|EEW22548.1| recombination protein RecR [Listeria monocytogenes F6900]
gi|284055974|gb|ADB66915.1| recombination protein RecR [Listeria monocytogenes 08-5578]
gi|284059065|gb|ADB70004.1| recombination protein RecR [Listeria monocytogenes 08-5923]
gi|290558478|gb|EFD91995.1| recombination protein RecR [Listeria monocytogenes FSL J2-071]
gi|293582572|gb|EFF94604.1| recombination protein RecR [Listeria monocytogenes HPB2262]
gi|293590954|gb|EFF99288.1| recombination protein RecR [Listeria monocytogenes J2818]
gi|293594173|gb|EFG01934.1| recombination protein RecR [Listeria monocytogenes FSL J1-194]
gi|300515815|gb|EFK42864.1| recombination protein RecR [Listeria monocytogenes FSL N1-017]
gi|307572290|emb|CAR85469.1| recombination protein [Listeria monocytogenes L99]
gi|313612374|gb|EFR86516.1| recombination protein RecR [Listeria marthii FSL S4-120]
gi|328468182|gb|EGF39188.1| recombination protein RecR [Listeria monocytogenes 1816]
gi|328469562|gb|EGF40503.1| recombination protein RecR [Listeria monocytogenes 220]
gi|332313133|gb|EGJ26228.1| Recombination protein recR [Listeria monocytogenes str. Scott A]
Length = 198
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 7 ITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ I E+I A + +EG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKAMEGR 195
>gi|254393634|ref|ZP_05008763.1| recombination protein recR [Streptomyces clavuligerus ATCC 27064]
gi|294813446|ref|ZP_06772089.1| Recombination protein recR [Streptomyces clavuligerus ATCC 27064]
gi|326441841|ref|ZP_08216575.1| recombination protein RecR [Streptomyces clavuligerus ATCC 27064]
gi|197707250|gb|EDY53062.1| recombination protein recR [Streptomyces clavuligerus ATCC 27064]
gi|294326045|gb|EFG07688.1| Recombination protein recR [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCSVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCGICRDPRRDLAVICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|270294151|ref|ZP_06200353.1| recombination protein RecR [Bacteroides sp. D20]
gi|270275618|gb|EFA21478.1| recombination protein RecR [Bacteroides sp. D20]
Length = 205
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 125/199 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSTLLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC QRDASV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCCICSSPQRDASVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVQRVAAGGINEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIVNRT 199
>gi|220918862|ref|YP_002494166.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956716|gb|ACL67100.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-1]
Length = 198
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+K LAR+PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 7 IARLVKELARLPGIGEKTAQRLAFHILKAGAGYAGDLAAAIAGVVRDVRLCSTCQTLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D +RD + VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+
Sbjct: 67 DPCAICRDPERDPRTLCVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D
Sbjct: 127 LLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQV 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLARALAGRREL 198
>gi|254786714|ref|YP_003074143.1| recombination protein RecR [Teredinibacter turnerae T7901]
gi|237687086|gb|ACR14350.1| recombination protein RecR [Teredinibacter turnerae T7901]
Length = 197
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI L +PG GP+SA R HL+++ + L++A+A +V C C +
Sbjct: 6 IDQLITSLRVLPGVGPKSATRMAFHLLERNREGAQALSQALAEASAQVKRCEQCRTLTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC +RD ++ VVE AD+ A+E+S + +Y VL G LSP+D +GP +IGI
Sbjct: 66 PCCAICASSKRDRQLMCVVESPADVVAIEQSGTFSGVYFVLHGKLSPIDGVGPREIGIDQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER + + I E+I A + T+EG+ TAHYI ++ K +K+TR+A+G+P+G EL+Y+D G
Sbjct: 126 LEERFQAEPISEVIIATNPTVEGEATAHYIAERAKKNAIKVTRIAHGVPLGGELEYIDGG 185
Query: 190 TIFEAIRSR 198
T+ AI SR
Sbjct: 186 TLAHAISSR 194
>gi|313677041|ref|YP_004055037.1| recombination protein recr [Marivirga tractuosa DSM 4126]
gi|312943739|gb|ADR22929.1| recombination protein RecR [Marivirga tractuosa DSM 4126]
Length = 202
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 125/198 (63%), Gaps = 2/198 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K IE+ + +++PG G ++A R LHL+K+ E +A+++ ++ + C C
Sbjct: 2 EFSSKLIESAVNEFSKLPGIGKKTALRLVLHLLKQDENFTTDIAQSLVDMRQNIKYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +RD S+I +VED D+ A+E + N LYHVLGG +SP++ IGPE
Sbjct: 62 HNISDEVVCNICKSHKRDNSIICLVEDTRDVLAIENTSQYNGLYHVLGGIISPIEGIGPE 121
Query: 124 DIGIQSLIERIEV--KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
D+ I SL+ER+ +++E+IF +S T+EG TTA YI K+K +K + +A GIP+G
Sbjct: 122 DLTIDSLMERVSNSDSEVKEIIFGLSPTMEGDTTAFYISKKVKQFGIKTSTIARGIPIGG 181
Query: 182 ELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I SRT
Sbjct: 182 ELEYADEITLGRSIVSRT 199
>gi|295395501|ref|ZP_06805696.1| recombination protein R [Brevibacterium mcbrellneri ATCC 49030]
gi|294971672|gb|EFG47552.1| recombination protein R [Brevibacterium mcbrellneri ATCC 49030]
Length = 204
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 121/190 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +L+ L ++PG GP+SA+R H+++ Q + LA A+ + +V C ICGNV
Sbjct: 9 LADLVDELGKLPGIGPKSAQRLAFHILQSPAQQVEQLASALTEVKRRVNFCEICGNVAEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D +RD SVI VVE+ D+ A+ER++ LYHVLGG++ P+ IGP+ + I+
Sbjct: 69 EKCAICQDTRRDQSVICVVEEAKDVVAIERTREYRGLYHVLGGAIDPMAGIGPDQLRIKQ 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ ++E + A +EG+ TA Y++ L + V +++LA G+P+G +L+Y D+
Sbjct: 129 LLTRLQTGDVKECVIATDPNLEGEATATYVIRLLSTVGVNVSKLASGLPVGGDLEYADEV 188
Query: 190 TIFEAIRSRT 199
T+ A + RT
Sbjct: 189 TLGRAFQGRT 198
>gi|256826357|ref|YP_003150317.1| DNA replication and repair protein RecR [Kytococcus sedentarius DSM
20547]
gi|256689750|gb|ACV07552.1| DNA replication and repair protein RecR [Kytococcus sedentarius DSM
20547]
Length = 204
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H++ + + LA A+ + KV C+ CGNV
Sbjct: 6 VQDLIDELNRLPGVGPKSAQRIAFHVLAADAEDVQRLATALQVVKEKVRFCATCGNVAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+D QRD + I VVE+ D+ A+ER++ YHVLGG++SPLD IGP+D+ I
Sbjct: 66 EECRICLDPQRDGTAICVVEEPRDVQAIERTREFRGRYHVLGGAISPLDGIGPDDLRIAQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++ E+I A +EG+ TA Y+ L+ +++K++RLA G+P+G +L+Y D+
Sbjct: 126 LMQRLGDGEVTEVIIATDPNMEGEATATYLSRMLQVLEIKVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 186 TLGRAFEGRRVV 197
>gi|239929913|ref|ZP_04686866.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672]
gi|291438248|ref|ZP_06577638.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672]
gi|291341143|gb|EFE68099.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672]
Length = 199
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALMEVKAKVRFCATCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D+ I+
Sbjct: 66 EQCSICRDARRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|86142320|ref|ZP_01060830.1| recombination protein recR [Leeuwenhoekiella blandensis MED217]
gi|85831072|gb|EAQ49529.1| recombination protein recR [Leeuwenhoekiella blandensis MED217]
Length = 205
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 126/195 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +E + ++++PG G R+A R LHL+++ E L EA+ + + C C
Sbjct: 2 EFSSKLLEQAVYEMSQLPGIGKRTALRLVLHLLQQPEAQTEQLTEALTGLRTGIKFCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC + R+++++ VVEDV D+ A+E + YHVLGG +SPLD IGP+
Sbjct: 62 HNISDTELCEICANPNRESAIVCVVEDVRDVMAIENTSQYRGHYHVLGGKISPLDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLIE+++ I E+IFA+S+T+EG TT YI +L+G++VK + +A GI +G EL
Sbjct: 122 DLTIYSLIEKVKSGAIEEIIFALSSTMEGDTTNFYIYRQLEGLNVKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
++ D+ T+ +I +R
Sbjct: 182 EFADEVTLGRSILNR 196
>gi|332521184|ref|ZP_08397642.1| recombination protein RecR [Lacinutrix algicola 5H-3-7-4]
gi|332043277|gb|EGI79474.1| recombination protein RecR [Lacinutrix algicola 5H-3-7-4]
Length = 240
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 127/195 (65%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+K+ ++ L++A+ ++ + C C
Sbjct: 37 EFSSKLLENAVNEISQLPGIGKRTALRLALHLLKQPKEQTTNLSQAITHMREDLKFCRSC 96
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC + R VI VVED+ D+ A+E + + LYHVLGG ++P++ IGP
Sbjct: 97 HNISDVDLCEICANPLRKKDVICVVEDIRDVMAIENTASHKGLYHVLGGKINPIEGIGPH 156
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLIE+++ I+ELIFA+S T+EG TT YI +L+G++V+ + +A GI +G EL
Sbjct: 157 DLNIVSLIEKVKSGNIKELIFALSPTMEGDTTNFYIFKQLQGLEVQTSTIARGISVGDEL 216
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 217 EYADEVTLGRSILNR 231
>gi|307565357|ref|ZP_07627850.1| recombination protein RecR [Prevotella amnii CRIS 21A-A]
gi|307346026|gb|EFN91370.1| recombination protein RecR [Prevotella amnii CRIS 21A-A]
Length = 202
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 123/190 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + ++ PG G ++A R LHL+++ + + A+ + + + C +C N+ T
Sbjct: 9 LEKAVNEFSQFPGIGRKTALRLVLHLLRQSTSRVDEFSNAITLMKHNIKSCKVCHNISDT 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RD S++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +GP DI I S
Sbjct: 69 DLCPICSDIHRDKSIVCVVENIQDVMAIENTQQFSGLYHVLGGIISPMDGVGPNDIEIDS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ I+E+IFA+++T+EG TT YI K+K ++K++ +A GI +G EL+Y D+
Sbjct: 129 LVERVRSGSIKEVIFALASTMEGDTTNFYISRKIKNFNIKLSVIARGISVGDELEYTDEV 188
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 189 TLGRSIVNRT 198
>gi|29653995|ref|NP_819687.1| recombination protein RecR [Coxiella burnetii RSA 493]
gi|153209000|ref|ZP_01947194.1| recombination protein RecR [Coxiella burnetii 'MSU Goat Q177']
gi|154706620|ref|YP_001424073.1| recombination protein RecR [Coxiella burnetii Dugway 5J108-111]
gi|161831096|ref|YP_001596583.1| recombination protein RecR [Coxiella burnetii RSA 331]
gi|165920274|ref|ZP_02219546.1| recombination protein RecR [Coxiella burnetii RSA 334]
gi|212219111|ref|YP_002305898.1| recombination protein RecR [Coxiella burnetii CbuK_Q154]
gi|73621482|sp|Q83DP0|RECR_COXBU RecName: Full=Recombination protein recR
gi|29541258|gb|AAO90201.1| recombination protein [Coxiella burnetii RSA 493]
gi|120575537|gb|EAX32161.1| recombination protein RecR [Coxiella burnetii 'MSU Goat Q177']
gi|154355906|gb|ABS77368.1| recombination protein [Coxiella burnetii Dugway 5J108-111]
gi|161762963|gb|ABX78605.1| recombination protein RecR [Coxiella burnetii RSA 331]
gi|165916830|gb|EDR35434.1| recombination protein RecR [Coxiella burnetii RSA 334]
gi|212013373|gb|ACJ20753.1| recombination protein [Coxiella burnetii CbuK_Q154]
Length = 201
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLG-PLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG GP+SA+R HL+ K Q G L++A+ + +V C +C + T
Sbjct: 7 KQLIEALQCLPGIGPKSAQRMAFHLLAKSGQAKGLALSDALQSAIRQVGECKLC-QIYTE 65
Query: 70 DP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
P C IC + +RD++++ VVE AD+ A+E+++ + Y VL G LSPLD IGP++IGI
Sbjct: 66 QPLCNICNNPKRDSTLLCVVESPADVVAIEQTQIYSGRYFVLHGHLSPLDGIGPQEIGIP 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L++R+ + I+ELI A +AT+EG+ TAHY+ + + +K +R+A+G+PMG EL+YLD
Sbjct: 126 ALLDRLRNETIKELIIATNATMEGKATAHYVANHIDHTKIKCSRIAHGVPMGGELEYLDG 185
Query: 189 GTIFEAIRSR 198
GT+ A+ SR
Sbjct: 186 GTLIHALHSR 195
>gi|282880427|ref|ZP_06289135.1| recombination protein RecR [Prevotella timonensis CRIS 5C-B1]
gi|281305698|gb|EFA97750.1| recombination protein RecR [Prevotella timonensis CRIS 5C-B1]
Length = 203
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 128/198 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + A++PG G ++A R L+++++ + + A+A++ + + V C
Sbjct: 1 MEQQYPSLLLEKAVSEFAKLPGIGRKTALRLVLNMLRRNVEEVEQFAQAISTMRHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ TD C IC D +RDAS I VVE++ D+ A+E + LYHVLGG +SP+D I
Sbjct: 61 RQCHNISDTDICPICADPRRDASTICVVENIQDVMAIENTMQYRGLYHVLGGLISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + IQSLI+R+E I E+I A+++T+EG TT YI KL +VK+T +A GIP+G
Sbjct: 121 GPDQLEIQSLIDRVEAGGISEVILALNSTMEGDTTNFYISRKLNSSEVKLTVIARGIPIG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
EL+Y D+ T+ +I +R
Sbjct: 181 DELEYTDEVTLGRSILNR 198
>gi|312897407|ref|ZP_07756831.1| recombination protein RecR [Megasphaera micronuciformis F0359]
gi|310621468|gb|EFQ05004.1| recombination protein RecR [Megasphaera micronuciformis F0359]
Length = 196
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L + R+PG G ++AR+ +++++ ++ +A+ ++ CS+C N+ +T
Sbjct: 5 LEHLAEQFRRLPGIGIKTARKLAYYMIQQPDEKTEAFIDAVRKAKEQMHFCSVCFNLSST 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C D RD SVI+VVE D+ A+ERSK + LYHVL G+LSPLD IGPED+ I+
Sbjct: 65 DPCTYCTDAHRDHSVIMVVETPQDVAAIERSKDYHGLYHVLHGALSPLDGIGPEDLHIKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ +++E+I A +EG+ TA Y+ LK VK+TR+A G+PMG ++++ D+
Sbjct: 125 LLQRLGDTRVQEVIIATDPDVEGEATALYLARLLKTAGVKVTRIARGLPMGGDIEFADEA 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLAGAVANR 193
>gi|300814122|ref|ZP_07094405.1| recombination protein RecR [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511779|gb|EFK38996.1| recombination protein RecR [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 201
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ L R+PG GP++A+R H++ + + LA ++ I +KV CS+C N+ T
Sbjct: 8 IEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELANSIGTIKSKVKKCSLCCNISDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I VV+ D+ A+ER+ LYHVL G +SPL DI
Sbjct: 68 DPCNICQDNNRDKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFVE 127
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R+E K+I+E+I A S T++G TA ++++ LK D+K+TR+ YG+P+G +L+Y D+
Sbjct: 128 LIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYDE 187
Query: 189 GTIFEAIRSRTVL 201
TI A+++R L
Sbjct: 188 ITISAALKNRREL 200
>gi|255304955|ref|ZP_05349129.1| recombination protein [Clostridium difficile ATCC 43255]
Length = 199
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 128/189 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSIC N+ T
Sbjct: 8 ITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKKEIRYCSICCNITDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC++C ++ RD+SVI VVED D+ A+ER++ YHVL G +SP+D IGP+ + I+
Sbjct: 68 DPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPDMLKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ ++++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TISKALEGR 196
>gi|113208301|dbj|BAF03507.1| recombinant protein [Streptomyces albulus]
Length = 195
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV
Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLANALMEVKAKVRFCSVCGNVAQE 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C+D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 62 EQCRVCLDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 122 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 181
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 182 TLGRAFEGRRLL 193
>gi|269836976|ref|YP_003319204.1| recombination protein RecR [Sphaerobacter thermophilus DSM 20745]
gi|269786239|gb|ACZ38382.1| recombination protein RecR [Sphaerobacter thermophilus DSM 20745]
Length = 201
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ ++T + + LI ++PG GP++A R H+++ + LAEA+ + ++ LC
Sbjct: 1 MRSRVTAEPVAKLIDEFGKLPGVGPKTASRLAYHILRSDREEAVALAEAILEVKERIVLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N+ DPC IC D+QRD I VVE+ D+ AL+R+ N LYHVL G LSP+D I
Sbjct: 61 STCFNITEHDPCPICSDEQRDRRTICVVEEPLDVVALDRTGEYNGLYHVLHGVLSPVDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + I+ L+ R++ E+I A++ IEG TA YI +L + V +TR A G+P+G
Sbjct: 121 GPDRLRIRELVARVQADPPDEVILALNPNIEGDATAMYIARQLLPLGVTVTRPASGLPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ A+ R L
Sbjct: 181 GDLEYADEVTLGRALAGRRAL 201
>gi|320009950|gb|ADW04800.1| recombination protein RecR [Streptomyces flavogriseus ATCC 33331]
Length = 199
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C ICGNV
Sbjct: 6 VQELIDELGRLPGVGPKSAQRIAFHVLQAEPTDVRRLAHALLEVKDKVRFCEICGNVAQQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCGICRDARRDRSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGSITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|78779491|ref|YP_397603.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. MIT 9312]
gi|123554087|sp|Q31AC8|RECR_PROM9 RecName: Full=Recombination protein recR
gi|78712990|gb|ABB50167.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. MIT 9312]
Length = 199
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N
Sbjct: 6 KPLSKLIGHFEKFPGIGPRTAQRLALFVLKQPESTIRDFSKALLEAHSNVGRCKKCFNFT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + I
Sbjct: 66 SEDECEICKNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ +I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 126 RSLVERVSKSEIDEIILALTPSVEGDTTSLYI-GKLLAPFTKVTRIAYGLPMGSELEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLARALEGRTKL 198
>gi|315305096|ref|ZP_07875119.1| recombination protein RecR [Listeria ivanovii FSL F6-596]
gi|313626537|gb|EFR95647.1| recombination protein RecR [Listeria ivanovii FSL F6-596]
Length = 198
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 7 ITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S+I VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICADTSRDQSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ I E+I A + +EG+ TA YI LK +KITR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKAMEGR 195
>gi|227519452|ref|ZP_03949501.1| recombination protein RecR [Enterococcus faecalis TX0104]
gi|229549119|ref|ZP_04437844.1| recombination protein RecR [Enterococcus faecalis ATCC 29200]
gi|255971838|ref|ZP_05422424.1| recombination protein RecR [Enterococcus faecalis T1]
gi|255974834|ref|ZP_05425420.1| recombination protein RecR [Enterococcus faecalis T2]
gi|256616734|ref|ZP_05473580.1| recombination protein RecR [Enterococcus faecalis ATCC 4200]
gi|256763387|ref|ZP_05503967.1| recombination protein RecR [Enterococcus faecalis T3]
gi|256957991|ref|ZP_05562162.1| recombination protein RecR [Enterococcus faecalis DS5]
gi|256960989|ref|ZP_05565160.1| recombination protein RecR [Enterococcus faecalis Merz96]
gi|256963868|ref|ZP_05568039.1| recombination protein RecR [Enterococcus faecalis HIP11704]
gi|257079928|ref|ZP_05574289.1| recombination protein RecR [Enterococcus faecalis JH1]
gi|257081674|ref|ZP_05576035.1| recombination protein RecR [Enterococcus faecalis E1Sol]
gi|257084271|ref|ZP_05578632.1| recombination protein RecR [Enterococcus faecalis Fly1]
gi|257087730|ref|ZP_05582091.1| recombination protein RecR [Enterococcus faecalis D6]
gi|257091002|ref|ZP_05585363.1| recombination protein recR [Enterococcus faecalis CH188]
gi|257416933|ref|ZP_05593927.1| recombination protein RecR [Enterococcus faecalis AR01/DG]
gi|257420152|ref|ZP_05597146.1| recombination protein recR [Enterococcus faecalis T11]
gi|257421625|ref|ZP_05598615.1| recombination protein recR [Enterococcus faecalis X98]
gi|293384624|ref|ZP_06630489.1| recombination protein RecR [Enterococcus faecalis R712]
gi|293386763|ref|ZP_06631334.1| recombination protein RecR [Enterococcus faecalis S613]
gi|294779712|ref|ZP_06745100.1| recombination protein RecR [Enterococcus faecalis PC1.1]
gi|300860165|ref|ZP_07106252.1| recombination protein RecR [Enterococcus faecalis TUSoD Ef11]
gi|307269206|ref|ZP_07550560.1| recombination protein RecR [Enterococcus faecalis TX4248]
gi|307271816|ref|ZP_07553087.1| recombination protein RecR [Enterococcus faecalis TX0855]
gi|307277001|ref|ZP_07558111.1| recombination protein RecR [Enterococcus faecalis TX2134]
gi|307278694|ref|ZP_07559762.1| recombination protein RecR [Enterococcus faecalis TX0860]
gi|307288617|ref|ZP_07568598.1| recombination protein RecR [Enterococcus faecalis TX0109]
gi|307290231|ref|ZP_07570147.1| recombination protein RecR [Enterococcus faecalis TX0411]
gi|312900124|ref|ZP_07759440.1| recombination protein RecR [Enterococcus faecalis TX0470]
gi|312906448|ref|ZP_07765456.1| recombination protein RecR [Enterococcus faecalis DAPTO 512]
gi|312951939|ref|ZP_07770827.1| recombination protein RecR [Enterococcus faecalis TX0102]
gi|312979394|ref|ZP_07791082.1| recombination protein RecR [Enterococcus faecalis DAPTO 516]
gi|227073064|gb|EEI11027.1| recombination protein RecR [Enterococcus faecalis TX0104]
gi|229305744|gb|EEN71740.1| recombination protein RecR [Enterococcus faecalis ATCC 29200]
gi|255962856|gb|EET95332.1| recombination protein RecR [Enterococcus faecalis T1]
gi|255967706|gb|EET98328.1| recombination protein RecR [Enterococcus faecalis T2]
gi|256596261|gb|EEU15437.1| recombination protein RecR [Enterococcus faecalis ATCC 4200]
gi|256684638|gb|EEU24333.1| recombination protein RecR [Enterococcus faecalis T3]
gi|256948487|gb|EEU65119.1| recombination protein RecR [Enterococcus faecalis DS5]
gi|256951485|gb|EEU68117.1| recombination protein RecR [Enterococcus faecalis Merz96]
gi|256954364|gb|EEU70996.1| recombination protein RecR [Enterococcus faecalis HIP11704]
gi|256987958|gb|EEU75260.1| recombination protein RecR [Enterococcus faecalis JH1]
gi|256989704|gb|EEU77006.1| recombination protein RecR [Enterococcus faecalis E1Sol]
gi|256992301|gb|EEU79603.1| recombination protein RecR [Enterococcus faecalis Fly1]
gi|256995760|gb|EEU83062.1| recombination protein RecR [Enterococcus faecalis D6]
gi|256999814|gb|EEU86334.1| recombination protein recR [Enterococcus faecalis CH188]
gi|257158761|gb|EEU88721.1| recombination protein RecR [Enterococcus faecalis ARO1/DG]
gi|257161980|gb|EEU91940.1| recombination protein recR [Enterococcus faecalis T11]
gi|257163449|gb|EEU93409.1| recombination protein recR [Enterococcus faecalis X98]
gi|291078082|gb|EFE15446.1| recombination protein RecR [Enterococcus faecalis R712]
gi|291083766|gb|EFE20729.1| recombination protein RecR [Enterococcus faecalis S613]
gi|294453203|gb|EFG21617.1| recombination protein RecR [Enterococcus faecalis PC1.1]
gi|295113699|emb|CBL32336.1| DNA replication and repair protein RecR [Enterococcus sp. 7L76]
gi|300849204|gb|EFK76954.1| recombination protein RecR [Enterococcus faecalis TUSoD Ef11]
gi|306498652|gb|EFM68153.1| recombination protein RecR [Enterococcus faecalis TX0411]
gi|306500371|gb|EFM69707.1| recombination protein RecR [Enterococcus faecalis TX0109]
gi|306504634|gb|EFM73836.1| recombination protein RecR [Enterococcus faecalis TX0860]
gi|306506424|gb|EFM75584.1| recombination protein RecR [Enterococcus faecalis TX2134]
gi|306511694|gb|EFM80693.1| recombination protein RecR [Enterococcus faecalis TX0855]
gi|306514425|gb|EFM82986.1| recombination protein RecR [Enterococcus faecalis TX4248]
gi|310627602|gb|EFQ10885.1| recombination protein RecR [Enterococcus faecalis DAPTO 512]
gi|310630128|gb|EFQ13411.1| recombination protein RecR [Enterococcus faecalis TX0102]
gi|311287765|gb|EFQ66321.1| recombination protein RecR [Enterococcus faecalis DAPTO 516]
gi|311292759|gb|EFQ71315.1| recombination protein RecR [Enterococcus faecalis TX0470]
gi|315025469|gb|EFT37401.1| recombination protein RecR [Enterococcus faecalis TX2137]
gi|315035136|gb|EFT47068.1| recombination protein RecR [Enterococcus faecalis TX0027]
gi|315143842|gb|EFT87858.1| recombination protein RecR [Enterococcus faecalis TX2141]
gi|315148726|gb|EFT92742.1| recombination protein RecR [Enterococcus faecalis TX4244]
gi|315151799|gb|EFT95815.1| recombination protein RecR [Enterococcus faecalis TX0012]
gi|315154272|gb|EFT98288.1| recombination protein RecR [Enterococcus faecalis TX0031]
gi|315155625|gb|EFT99641.1| recombination protein RecR [Enterococcus faecalis TX0043]
gi|315159636|gb|EFU03653.1| recombination protein RecR [Enterococcus faecalis TX0312]
gi|315162071|gb|EFU06088.1| recombination protein RecR [Enterococcus faecalis TX0645]
gi|315165332|gb|EFU09349.1| recombination protein RecR [Enterococcus faecalis TX1302]
gi|315168746|gb|EFU12763.1| recombination protein RecR [Enterococcus faecalis TX1341]
gi|315170438|gb|EFU14455.1| recombination protein RecR [Enterococcus faecalis TX1342]
gi|315173505|gb|EFU17522.1| recombination protein RecR [Enterococcus faecalis TX1346]
gi|315579602|gb|EFU91793.1| recombination protein RecR [Enterococcus faecalis TX0630]
gi|323481687|gb|ADX81126.1| recombination protein RecR [Enterococcus faecalis 62]
gi|327535979|gb|AEA94813.1| recombination protein R [Enterococcus faecalis OG1RF]
Length = 198
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN+
Sbjct: 7 IAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDINIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLLKAVEGR 195
>gi|297158533|gb|ADI08245.1| recombination protein RecR [Streptomyces bingchenggensis BCW-1]
Length = 199
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPADVRRLAHALTEVKDKVRFCAVCGNVAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLADGTVTELILATDPNLEGEATATYLARMVKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|126697584|ref|YP_001086481.1| recombination protein [Clostridium difficile 630]
gi|254973668|ref|ZP_05270140.1| recombination protein [Clostridium difficile QCD-66c26]
gi|255091059|ref|ZP_05320537.1| recombination protein [Clostridium difficile CIP 107932]
gi|255099175|ref|ZP_05328152.1| recombination protein [Clostridium difficile QCD-63q42]
gi|255312713|ref|ZP_05354296.1| recombination protein [Clostridium difficile QCD-76w55]
gi|255515473|ref|ZP_05383149.1| recombination protein [Clostridium difficile QCD-97b34]
gi|255648565|ref|ZP_05395467.1| recombination protein [Clostridium difficile QCD-37x79]
gi|255654100|ref|ZP_05399509.1| recombination protein [Clostridium difficile QCD-23m63]
gi|260681787|ref|YP_003213072.1| recombination protein [Clostridium difficile CD196]
gi|260685384|ref|YP_003216517.1| recombination protein [Clostridium difficile R20291]
gi|296452475|ref|ZP_06894174.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP08]
gi|296878243|ref|ZP_06902253.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP07]
gi|306518694|ref|ZP_07405041.1| recombination protein RecR [Clostridium difficile QCD-32g58]
gi|123067140|sp|Q18CA2|RECR_CLOD6 RecName: Full=Recombination protein recR
gi|115249021|emb|CAJ66832.1| DNA repair and recombination protein [Clostridium difficile]
gi|260207950|emb|CBA60073.1| recombination protein [Clostridium difficile CD196]
gi|260211400|emb|CBE01475.1| recombination protein [Clostridium difficile R20291]
gi|296258681|gb|EFH05577.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP08]
gi|296430751|gb|EFH16588.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP07]
Length = 199
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 128/189 (67%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSIC N+ T
Sbjct: 8 ITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSICCNITDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC++C ++ RD+SVI VVED D+ A+ER++ YHVL G +SP+D IGP+ + I+
Sbjct: 68 DPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPDMLKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ ++++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TISKALEGR 196
>gi|329955111|ref|ZP_08296092.1| recombination protein RecR [Bacteroides clarus YIT 12056]
gi|328526401|gb|EGF53416.1| recombination protein RecR [Bacteroides clarus YIT 12056]
Length = 205
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 125/190 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ A+ + ++V C +C N+ T
Sbjct: 10 LEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 70 ETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGIGPGDLEIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E++ A+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVSAGGIKEVVLALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|302544192|ref|ZP_07296534.1| recombination protein RecR [Streptomyces hygroscopicus ATCC 53653]
gi|302461810|gb|EFL24903.1| recombination protein RecR [Streptomyces himastatinicus ATCC 53653]
Length = 199
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTEVKEKVRFCAVCGNVAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|154486524|ref|ZP_02027931.1| hypothetical protein BIFADO_00339 [Bifidobacterium adolescentis
L2-32]
gi|154084387|gb|EDN83432.1| hypothetical protein BIFADO_00339 [Bifidobacterium adolescentis
L2-32]
Length = 200
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +L+ ++ L +A+ + KV C ICGNV T
Sbjct: 9 IQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFCDICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C+D +RD SVI VVE+ D+ ++ER++ +YHVLGG ++P+ + P D+ I
Sbjct: 69 SPCPVCVDPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANVQPSDLNIAK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G +L+Y D+
Sbjct: 129 LIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|326800491|ref|YP_004318310.1| recombination protein recR [Sphingobacterium sp. 21]
gi|326551255|gb|ADZ79640.1| Recombination protein recR [Sphingobacterium sp. 21]
Length = 204
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 121/195 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + +R+PG G ++A R LHL+ + + ++A+ + +++C C++C
Sbjct: 2 NFSSKLLENAVNEFSRLPGIGQKTALRLVLHLLNQPADDVTKFSDALTKLKSEICYCAVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +RD +I VVED D+ A+E + N +YHVLGG +SP+D +GP
Sbjct: 62 HNIADEAICEICNAPKRDKGLICVVEDTRDVMAIENTNQFNGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLI R+ + E+I A+SAT+EG TT Y+ KLK +V+I+ +A GI G EL
Sbjct: 122 DLSIDSLINRLRENDVHEIILALSATMEGDTTIFYLYKKLKDFNVQISTIARGISFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEVTLGRSIVTR 196
>gi|288554628|ref|YP_003426563.1| recombination protein RecR [Bacillus pseudofirmus OF4]
gi|288545788|gb|ADC49671.1| recombination protein RecR [Bacillus pseudofirmus OF4]
Length = 198
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG GP++A R ++ KE + A+A+ N + CS+C N+ T
Sbjct: 7 IAKLIEGFMKLPGIGPKTASRLAFFVLDMKEDDVLDFAKALVNAKRNLTYCSVCHNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S++ VV++ D+ A+E+ K YHVL G++SP+D IGPED+ I
Sbjct: 67 DPCRICEDKHRDDSMVCVVQEAKDVIAMEKMKEYRGHYHVLHGAISPMDGIGPEDVKIPE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ I+E+I A + TIEG+ TA YI +K +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDTIQEVIIATNPTIEGEATAMYISRLVKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI R L
Sbjct: 187 TLSRAIEGRREL 198
>gi|229544853|ref|ZP_04433578.1| recombination protein RecR [Enterococcus faecalis TX1322]
gi|256854060|ref|ZP_05559425.1| recombination protein recR [Enterococcus faecalis T8]
gi|229310021|gb|EEN76008.1| recombination protein RecR [Enterococcus faecalis TX1322]
gi|256711003|gb|EEU26046.1| recombination protein recR [Enterococcus faecalis T8]
gi|315030415|gb|EFT42347.1| recombination protein RecR [Enterococcus faecalis TX4000]
Length = 198
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN+
Sbjct: 7 IAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPED+ I S
Sbjct: 67 DPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDVNIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLLKAVEGR 195
>gi|282863698|ref|ZP_06272756.1| recombination protein RecR [Streptomyces sp. ACTE]
gi|282561399|gb|EFB66943.1| recombination protein RecR [Streptomyces sp. ACTE]
Length = 199
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C +CGNV
Sbjct: 6 VQELIDELGRLPGVGPKSAQRIAFHVLQAEPTDVRRLAHALLEVKDKVRFCEVCGNVAQQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCAICRDARRDRTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|224539567|ref|ZP_03680106.1| hypothetical protein BACCELL_04474 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518801|gb|EEF87906.1| hypothetical protein BACCELL_04474 [Bacteroides cellulosilyticus
DSM 14838]
Length = 205
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFSSILLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 RVCHNISDTETCRICANPQRDASTVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVRRVAAGGIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|314937926|ref|ZP_07845242.1| recombination protein RecR [Enterococcus faecium TX0133a04]
gi|314941417|ref|ZP_07848310.1| recombination protein RecR [Enterococcus faecium TX0133C]
gi|314948528|ref|ZP_07851908.1| recombination protein RecR [Enterococcus faecium TX0082]
gi|314951283|ref|ZP_07854337.1| recombination protein RecR [Enterococcus faecium TX0133A]
gi|314992886|ref|ZP_07858287.1| recombination protein RecR [Enterococcus faecium TX0133B]
gi|314998090|ref|ZP_07862978.1| recombination protein RecR [Enterococcus faecium TX0133a01]
gi|313587932|gb|EFR66777.1| recombination protein RecR [Enterococcus faecium TX0133a01]
gi|313592690|gb|EFR71535.1| recombination protein RecR [Enterococcus faecium TX0133B]
gi|313596500|gb|EFR75345.1| recombination protein RecR [Enterococcus faecium TX0133A]
gi|313599840|gb|EFR78683.1| recombination protein RecR [Enterococcus faecium TX0133C]
gi|313642784|gb|EFS07364.1| recombination protein RecR [Enterococcus faecium TX0133a04]
gi|313645025|gb|EFS09605.1| recombination protein RecR [Enterococcus faecium TX0082]
Length = 200
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN+
Sbjct: 9 IAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGNITEE 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 69 DPCEICRNPSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDINISS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 129 LLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 189 TLLKAVEGRREL 200
>gi|315032615|gb|EFT44547.1| recombination protein RecR [Enterococcus faecalis TX0017]
Length = 198
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN+
Sbjct: 7 IAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGAGPEDINIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLLKAVEGR 195
>gi|312902588|ref|ZP_07761794.1| recombination protein RecR [Enterococcus faecalis TX0635]
gi|310634258|gb|EFQ17541.1| recombination protein RecR [Enterococcus faecalis TX0635]
Length = 198
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN+
Sbjct: 7 IAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGNIAEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDINIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLLKAVEGR 195
>gi|257879312|ref|ZP_05658965.1| recombination protein recR [Enterococcus faecium 1,230,933]
gi|257881872|ref|ZP_05661525.1| recombination protein recR [Enterococcus faecium 1,231,502]
gi|257885060|ref|ZP_05664713.1| recombination protein recR [Enterococcus faecium 1,231,501]
gi|257890138|ref|ZP_05669791.1| recombination protein recR [Enterococcus faecium 1,231,410]
gi|257893466|ref|ZP_05673119.1| recombination protein recR [Enterococcus faecium 1,231,408]
gi|258615718|ref|ZP_05713488.1| recombination protein RecR [Enterococcus faecium DO]
gi|260558754|ref|ZP_05830943.1| recombination protein RecR [Enterococcus faecium C68]
gi|261207349|ref|ZP_05922036.1| recombination protein RecR [Enterococcus faecium TC 6]
gi|289566856|ref|ZP_06447265.1| recombination protein RecR [Enterococcus faecium D344SRF]
gi|293550623|ref|ZP_06673291.1| recombination protein RecR [Enterococcus faecium E1039]
gi|293559586|ref|ZP_06676120.1| recombination protein RecR [Enterococcus faecium E1162]
gi|294615744|ref|ZP_06695594.1| recombination protein RecR [Enterococcus faecium E1636]
gi|294617669|ref|ZP_06697296.1| recombination protein RecR [Enterococcus faecium E1679]
gi|294621755|ref|ZP_06700915.1| recombination protein RecR [Enterococcus faecium U0317]
gi|257813540|gb|EEV42298.1| recombination protein recR [Enterococcus faecium 1,230,933]
gi|257817530|gb|EEV44858.1| recombination protein recR [Enterococcus faecium 1,231,502]
gi|257820912|gb|EEV48046.1| recombination protein recR [Enterococcus faecium 1,231,501]
gi|257826498|gb|EEV53124.1| recombination protein recR [Enterococcus faecium 1,231,410]
gi|257829845|gb|EEV56452.1| recombination protein recR [Enterococcus faecium 1,231,408]
gi|260075213|gb|EEW63526.1| recombination protein RecR [Enterococcus faecium C68]
gi|260078409|gb|EEW66113.1| recombination protein RecR [Enterococcus faecium TC 6]
gi|289161344|gb|EFD09235.1| recombination protein RecR [Enterococcus faecium D344SRF]
gi|291591395|gb|EFF23054.1| recombination protein RecR [Enterococcus faecium E1636]
gi|291596076|gb|EFF27342.1| recombination protein RecR [Enterococcus faecium E1679]
gi|291598642|gb|EFF29699.1| recombination protein RecR [Enterococcus faecium U0317]
gi|291603244|gb|EFF33428.1| recombination protein RecR [Enterococcus faecium E1039]
gi|291606462|gb|EFF35862.1| recombination protein RecR [Enterococcus faecium E1162]
Length = 198
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICRNPSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDINISS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|198275302|ref|ZP_03207833.1| hypothetical protein BACPLE_01461 [Bacteroides plebeius DSM 17135]
gi|198271885|gb|EDY96155.1| hypothetical protein BACPLE_01461 [Bacteroides plebeius DSM 17135]
Length = 236
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ + + A++ + +V C
Sbjct: 32 MNQQYPSVLLEKAVGEFAKLPGIGRKTAMRLVLHLLRQDTATVEAFSSAISTLKKEVKYC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RD + + VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 92 KVCHNISDTDVCRICSNPSRDVTTVCVVENIRDVMAVENTQQYRGLYHVLGGVISPMDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R++ ++E+I A+S+T+EG TT YI KL G DVKIT +A GI +G
Sbjct: 152 GPSDLEIESLVNRVKEGTVKEVILALSSTMEGDTTNFYIFRKLVGCDVKITVIARGISIG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +R
Sbjct: 212 DELQYTDEVTLGRSIVNRVAF 232
>gi|329964827|ref|ZP_08301835.1| recombination protein RecR [Bacteroides fluxus YIT 12057]
gi|328524468|gb|EGF51536.1| recombination protein RecR [Bacteroides fluxus YIT 12057]
Length = 205
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 125/190 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ A+ + ++V C +C N+ T
Sbjct: 10 LEKAVSEFAKLPGIGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD+SV+ VVE++ D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 70 ETCRICSNPQRDSSVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGIGPGDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVSSGDIKEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVGDELEYADEI 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|323359077|ref|YP_004225473.1| recombinational DNA repair protein [Microbacterium testaceum
StLB037]
gi|323275448|dbj|BAJ75593.1| recombinational DNA repair protein [Microbacterium testaceum
StLB037]
Length = 197
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI R+PG GP+SA+R H+++ + L+ + I +KV C ICGNV
Sbjct: 6 VQDLIDEFGRLPGIGPKSAQRIAFHILQSPSFDVSRLSTLLGEIRDKVKFCEICGNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +R+A++I VVED D+ A+ER++ LYHVLGG++SP+ IGP+D+ +
Sbjct: 66 ERCSICRDPRRNATLICVVEDAKDVAAIERTREFRGLYHVLGGAISPIAGIGPDDLRVTQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A + +EG+ TA Y+ L +++++TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLADGTVQEVILATNPNLEGEATATYLSRLLHTLEIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFEGRRTL 197
>gi|224283525|ref|ZP_03646847.1| recombination protein RecR [Bifidobacterium bifidum NCIMB 41171]
gi|310288214|ref|YP_003939473.1| recombination protein RecR [Bifidobacterium bifidum S17]
gi|311065081|ref|YP_003971807.1| Recombination protein RecR [Bifidobacterium bifidum PRL2010]
gi|313140681|ref|ZP_07802874.1| recombination protein recR [Bifidobacterium bifidum NCIMB 41171]
gi|309252151|gb|ADO53899.1| recombination protein RecR [Bifidobacterium bifidum S17]
gi|310867401|gb|ADP36770.1| RecR Recombination protein [Bifidobacterium bifidum PRL2010]
gi|313133191|gb|EFR50808.1| recombination protein recR [Bifidobacterium bifidum NCIMB 41171]
Length = 200
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +L+ ++ G L +A+ + KV C ICGNV
Sbjct: 9 IQRLIDAFAGLPGIGPKGAQRIAFYLLSASDEETGKLVDAITEVKEKVRFCDICGNVCEV 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD VI VVE+ D+ ++ER++ YHVLGG+++P+ +GP D+ I
Sbjct: 69 SPCPVCADPRRDHGVICVVEEPKDVMSIERTREYRGQYHVLGGAINPMANVGPADLNIPK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ +++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+GS+L+Y D+
Sbjct: 129 LLDRLKTDEVKEVILALDPNIEGEATTTYLSRLLSPLGIKVTRLASGLPVGSDLEYADEV 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALTGR 197
>gi|159903630|ref|YP_001550974.1| RecR protein [Prochlorococcus marinus str. MIT 9211]
gi|159888806|gb|ABX09020.1| RecR protein [Prochlorococcus marinus str. MIT 9211]
Length = 182
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E+ + A A+ N N+V C C ++ + C IC++Q
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEERIKAFANALLNARNQVGQCQQCFHLTEGNECEICLNQN 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R ++I VV D DL ALER++ LYHVLGG +SP+D IGPE + I L++RI ++
Sbjct: 61 RQRNLICVVADSRDLLALERTREYKGLYHVLGGLISPMDGIGPELLNISPLVKRITSEET 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
E+I A++ ++EG TT+ Y+ KL VK+TR+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 TEVILALTPSVEGDTTSLYLA-KLLNAFVKVTRIAYGLPVGSELEYADEVTLARALEGR 178
>gi|218294871|ref|ZP_03495725.1| recombination protein RecR [Thermus aquaticus Y51MC23]
gi|218244779|gb|EED11303.1| recombination protein RecR [Thermus aquaticus Y51MC23]
Length = 194
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 134/194 (69%), Gaps = 7/194 (3%)
Query: 11 ENLIKI---LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
E+L+K+ L+R+PG GP++A++ L L KE + L E +A + + + +C +CGN+
Sbjct: 5 ESLLKLARALSRLPGIGPKTAQKLALFLAFHKE-VAEELKEGLAALRD-LGVCRVCGNLA 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD +++ VVE VADL+ALERS + +YHVLGG+L+PL+ +GP+D+ +
Sbjct: 63 EGELCPICQDEGRDRALLAVVETVADLYALERSGEFSGVYHVLGGALNPLEGVGPKDLNL 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL R++ ++RE+I A S T+EG+ TA ++ ++LK VK TRLAYG+P+G L+Y+D
Sbjct: 123 ESLWPRLQ--EVREVILATSMTVEGEATALFLAEELKKRGVKATRLAYGLPVGGSLEYVD 180
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R L
Sbjct: 181 EVTLGRALEGRKPL 194
>gi|304407304|ref|ZP_07388957.1| recombination protein RecR [Paenibacillus curdlanolyticus YK9]
gi|304343745|gb|EFM09586.1| recombination protein RecR [Paenibacillus curdlanolyticus YK9]
Length = 199
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A R H+++ +E + A+A+ ++ + CS+C N+
Sbjct: 7 IAKLIDAFTRLPGIGPKTAARLAFHVLRMQEDDVIDFAKALVSVKRNLHYCSVCCNITDV 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD +VI VV++ DL A+ER+K + YHVL G++SP++ IGP+ I +
Sbjct: 67 DPCRICQDKNRDHAVICVVQESKDLVAMERTKEFSGYYHVLQGAISPMEGIGPDQIRVAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++++ELI A + IEG+ TA Y+ +K +++TR+A+G+P+G +L+Y D+
Sbjct: 127 LLQRLSDERVQELIMATNPNIEGEATAMYLSRLVKPFGIRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRREL 198
>gi|300853307|ref|YP_003778291.1| putative recombination protein RecR [Clostridium ljungdahlii DSM
13528]
gi|300433422|gb|ADK13189.1| predicted recombination protein RecR [Clostridium ljungdahlii DSM
13528]
Length = 198
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TL+++ + A+A+ N + CS+CGN +
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLYILNLPGDEVKEFAKALVNARGTIRYCSVCGNFTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD SVI VVE D+ A+ER K N +YHVL G++SP+ GP DI ++
Sbjct: 68 DPCAICSNPNRDKSVICVVEQPKDIMAMERIKEYNGVYHVLHGNISPMAGRGPNDIKLKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI ++E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G L+Y D+
Sbjct: 128 LITRIN-GNVKEVIVATNPNVEGEATAMYISKILKHLGVKVTRIAHGIPVGGNLEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|269793813|ref|YP_003313268.1| DNA replication and repair protein RecR [Sanguibacter keddieii DSM
10542]
gi|269095998|gb|ACZ20434.1| DNA replication and repair protein RecR [Sanguibacter keddieii DSM
10542]
Length = 199
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + LAEA+ + KV C ICGNV +
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLAADAEDARRLAEALTEVKLKVRFCEICGNVAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R +VI VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D+ I+
Sbjct: 66 EQCRICQDPRRSVAVICVVEEAKDVVAIERTREFRGKYHVLGGAINPIDNVGPDDLRIKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A+ +EG+ TA Y+ L + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLADGAVQEVILAMDPNVEGEATATYLARMLGPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 186 TLGRAFEGRRVV 197
>gi|160887705|ref|ZP_02068708.1| hypothetical protein BACUNI_00106 [Bacteroides uniformis ATCC 8492]
gi|317478909|ref|ZP_07938056.1| recombination protein RecR [Bacteroides sp. 4_1_36]
gi|156862836|gb|EDO56267.1| hypothetical protein BACUNI_00106 [Bacteroides uniformis ATCC 8492]
gi|316904886|gb|EFV26693.1| recombination protein RecR [Bacteroides sp. 4_1_36]
Length = 205
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 124/199 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSTLLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC QRDASV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSSPQRDASVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVRRVAAGGINEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIVNRT 199
>gi|212212866|ref|YP_002303802.1| recombination protein RecR [Coxiella burnetii CbuG_Q212]
gi|212011276|gb|ACJ18657.1| recombination protein [Coxiella burnetii CbuG_Q212]
Length = 201
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLG-PLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG GP+SA+R HL+ K Q G L++A+ + +V C +C + T
Sbjct: 7 KQLIEALQCLPGIGPKSAQRMAFHLLAKSGQAKGLALSDALQSAIRQVGECKLC-QIYTE 65
Query: 70 DP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
P C IC + +RD++++ VVE AD+ A+E+++ + Y V G LSPLD IGP++IGI
Sbjct: 66 QPLCNICNNPKRDSTLLCVVESPADVVAIEQTQIYSGRYFVFHGHLSPLDGIGPQEIGIP 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L++R+ + I+ELI A +AT+EG+ TAHY+ + + +K +R+A+G+PMG EL+YLD
Sbjct: 126 ALLDRLRNETIKELIIATNATMEGKATAHYVANHIDHTKIKCSRIAHGVPMGGELEYLDG 185
Query: 189 GTIFEAIRSR 198
GT+ A+ SR
Sbjct: 186 GTLIHALHSR 195
>gi|163842076|ref|YP_001626481.1| recombination protein RecR [Renibacterium salmoninarum ATCC 33209]
gi|162955552|gb|ABY25067.1| recombination protein [Renibacterium salmoninarum ATCC 33209]
Length = 199
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + L ++ + +V CSICGNV
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRLAFHILEADPEDMKRLVTSIVTVKERVKFCSICGNVAEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D +RD ++I VVE+ D+ A+ER+++ LYHVLGG+++P+ +GP+ + I+
Sbjct: 66 DTCSICRDPRRDPTIICVVEESKDVIAVERTRSFRGLYHVLGGAINPIAGVGPDQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +I E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+Y D+
Sbjct: 126 LLNRLSDSQIEEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|302390661|ref|YP_003826482.1| DNA replication and repair protein RecR [Thermosediminibacter
oceani DSM 16646]
gi|302201289|gb|ADL08859.1| DNA replication and repair protein RecR [Thermosediminibacter
oceani DSM 16646]
Length = 198
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ I LI+ L+R+PG GP++A+R +++K L +A+A + CS+CGN
Sbjct: 6 EPIARLIEELSRLPGIGPKTAQRLAFYILKMPADRAARLVQAIAGARESIVYCSVCGNFT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC+IC RD + I+VVED D+ A+E+++ LYHVL G +SPL+ IGP+DI I
Sbjct: 66 DVDPCSICNAPHRDRNTIMVVEDPKDVVAIEKTRDYKGLYHVLHGVISPLEGIGPDDIRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ ++E+I A + +EG+ TA YI LK + +K+TR+A+GIPMG +LDY D
Sbjct: 126 KELLARV-ASGVKEVIIATNPDVEGEATALYIARLLKPLGLKVTRIAHGIPMGGDLDYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +A+ R L
Sbjct: 185 EITLAKALEGRREL 198
>gi|23097486|ref|NP_690952.1| recombination protein RecR [Oceanobacillus iheyensis HTE831]
gi|33301529|sp|Q8EU58|RECR_OCEIH RecName: Full=Recombination protein recR
gi|22775709|dbj|BAC11987.1| recombination protein (DNA repair and genetic recombination)
[Oceanobacillus iheyensis HTE831]
Length = 198
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG GP++A R ++ KE + A A+ + ++ CS+CG++
Sbjct: 7 ITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVCGHITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD S+I VV+D D+ A+E+ K + YHVL G++SP+D IGPEDI +
Sbjct: 67 DPCAICTDTSRDGSLICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPEDINVPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R++ +++ ELI A + IEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+
Sbjct: 127 LINRLKDEEVEELILATNPNIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|116750217|ref|YP_846904.1| recombination protein RecR [Syntrophobacter fumaroxidans MPOB]
gi|171460802|sp|A0LM17|RECR_SYNFM RecName: Full=Recombination protein recR
gi|116699281|gb|ABK18469.1| DNA replication and repair protein RecR [Syntrophobacter
fumaroxidans MPOB]
Length = 201
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI+ L+++PG G +SA R +HL+K LA+A+ + +++ CS C +
Sbjct: 10 MNDLIRRLSKLPGLGEKSATRIAMHLLKMSRTDAESLADAIRELRSRIRTCSRCFHFTDA 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D RD I VVE ADL A+E+S A YHVL G L+PLD +GP+D+ I+
Sbjct: 70 EECSICADPARDTGEICVVETTADLLAIEQSGAYRGRYHVLQGVLAPLDAVGPDDLRIRE 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ERI+ + RE+I A + + EG+ TAHY++ LK +V+++R+AYGIPMG +L Y D
Sbjct: 130 LLERIDREGAREVIIATNPSSEGEATAHYLLKLLKDRNVRVSRIAYGIPMGGDLKYTDRF 189
Query: 190 TIFEAIRSRTVL 201
T+ A++ R
Sbjct: 190 TLERALKGRQAF 201
>gi|290958616|ref|YP_003489798.1| DNA modification/recombination protein [Streptomyces scabiei 87.22]
gi|260648142|emb|CBG71250.1| putative DNA modification/recombination protein [Streptomyces
scabiei 87.22]
Length = 199
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ELCGICRDSRRDVTVICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGRVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|302559463|ref|ZP_07311805.1| recombination protein RecR [Streptomyces griseoflavus Tu4000]
gi|302477081|gb|EFL40174.1| recombination protein RecR [Streptomyces griseoflavus Tu4000]
Length = 199
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALMEVKAKVRFCATCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D+ I+
Sbjct: 66 EQCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|302553016|ref|ZP_07305358.1| recombination protein RecR [Streptomyces viridochromogenes DSM
40736]
gi|302470634|gb|EFL33727.1| recombination protein RecR [Streptomyces viridochromogenes DSM
40736]
Length = 199
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C+ CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCATCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D+ I+
Sbjct: 66 ELCNICRDTRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|21673635|ref|NP_661700.1| recombination/replication protein RecR [Chlorobium tepidum TLS]
gi|25091147|sp|Q8KE84|RECR_CHLTE RecName: Full=Recombination protein recR
gi|21646751|gb|AAM72042.1| recombination/replication protein RecR [Chlorobium tepidum TLS]
Length = 204
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 128/197 (64%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
+E LI+ A++PG G ++A+R T+H++ ++ + LA A+ ++ KV CS+C N+
Sbjct: 8 VEALIEEFAKLPGIGRKTAQRLTMHVLHERRSEVEKLASALIDVKEKVIRCSVCQNITDL 67
Query: 69 -TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC RD SVI VVE ++ A E++ LYHVL G +SPLD +GP+DI +
Sbjct: 68 GVDPCHICTSAGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVGPDDIKV 127
Query: 128 QSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ LI RI V +RE++ A++ T+EG+TT+ YI LK + + +TR+A GIP+G+EL+
Sbjct: 128 RELIARIGVDSTGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGIPVGAELE 187
Query: 185 YLDDGTIFEAIRSRTVL 201
++D+ T+ A+ R+ +
Sbjct: 188 FIDEATLSRAMEGRSAI 204
>gi|293567581|ref|ZP_06678925.1| recombination protein RecR [Enterococcus faecium E1071]
gi|291589682|gb|EFF21486.1| recombination protein RecR [Enterococcus faecium E1071]
Length = 198
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICRNLSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDINISS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|227550402|ref|ZP_03980451.1| recombination protein RecR [Enterococcus faecium TX1330]
gi|227180461|gb|EEI61433.1| recombination protein RecR [Enterococcus faecium TX1330]
Length = 200
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN+
Sbjct: 9 IAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGNITEE 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD S+I+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 69 DPCEICRNPSRDRSIILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDINISS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 129 LLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 189 TLLKAVEGRREL 200
>gi|255036664|ref|YP_003087285.1| recombination protein RecR [Dyadobacter fermentans DSM 18053]
gi|254949420|gb|ACT94120.1| recombination protein RecR [Dyadobacter fermentans DSM 18053]
Length = 204
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE + ++R+PG G ++A R LHL+K+ E+ L++A+ N+ K CS C N+
Sbjct: 8 IEEAVAEISRLPGIGKKTALRLALHLLKRDEEQTRSLSDALLNMRTKTTYCSRCHNIADD 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + +RD + I VV D D+ A+E + LYHVLGG +SPL+ IGP D+ I S
Sbjct: 68 TLCNICSNNKRDQATICVVVDTRDVLAIESTNQYRGLYHVLGGIISPLEGIGPSDLEIDS 127
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ RIE K+ +RE+I A+S T+EG TTA Y+ +LK + VKI+ +A GIP+G +L+Y
Sbjct: 128 LMSRIEKKEGDEAVREVILALSPTMEGDTTAFYLQKRLKALGVKISTIARGIPIGGDLEY 187
Query: 186 LDDGTIFEAIRSR 198
D+ T+ +I SR
Sbjct: 188 ADEITLGRSIVSR 200
>gi|29377240|ref|NP_816394.1| recombination protein RecR [Enterococcus faecalis V583]
gi|227554248|ref|ZP_03984295.1| recombination protein RecR [Enterococcus faecalis HH22]
gi|73621483|sp|Q830L4|RECR_ENTFA RecName: Full=Recombination protein recR
gi|29344706|gb|AAO82464.1| recombination protein RecR [Enterococcus faecalis V583]
gi|227176608|gb|EEI57580.1| recombination protein RecR [Enterococcus faecalis HH22]
gi|315573803|gb|EFU85994.1| recombination protein RecR [Enterococcus faecalis TX0309B]
gi|315580315|gb|EFU92506.1| recombination protein RecR [Enterococcus faecalis TX0309A]
Length = 198
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN+
Sbjct: 7 IAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I+VVE+ D+ ++E+ + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICQDKNRDRSIILVVEEPKDVMSMEKMREYQGLYHVLHGVLSPMEGTGPEDINIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLLKAVEGR 195
>gi|182437170|ref|YP_001824889.1| recombination protein RecR [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777796|ref|ZP_08237061.1| Recombination protein recR [Streptomyces cf. griseus XylebKG-1]
gi|178465686|dbj|BAG20206.1| putative recombination and repair protein [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326658129|gb|EGE42975.1| Recombination protein recR [Streptomyces cf. griseus XylebKG-1]
Length = 199
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA ++ + +KV C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHSLLEVKDKVRFCEVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCGICRDARRDRSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGSITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|116669120|ref|YP_830053.1| recombination protein RecR [Arthrobacter sp. FB24]
gi|172044057|sp|A0JSD3|RECR_ARTS2 RecName: Full=Recombination protein recR
gi|116609229|gb|ABK01953.1| DNA replication and repair protein RecR [Arthrobacter sp. FB24]
Length = 199
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ Q + L EA+ + +V C++CGNV
Sbjct: 6 VQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKERVKFCTVCGNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S+I VVE+ D+ A+ER+++ YHVLGG+++P+ +GPE + I+
Sbjct: 66 ELCNICRDPRRDPSIICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGVGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLNDGAIQEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|254385607|ref|ZP_05000932.1| recombination protein recR [Streptomyces sp. Mg1]
gi|194344477|gb|EDX25443.1| recombination protein recR [Streptomyces sp. Mg1]
Length = 199
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCAVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ERCTICRDPRRDTTVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGVVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|302535333|ref|ZP_07287675.1| recombination protein RecR [Streptomyces sp. C]
gi|302444228|gb|EFL16044.1| recombination protein RecR [Streptomyces sp. C]
Length = 199
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCAVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ELCGICRDPRRDTAVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGAVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|117929222|ref|YP_873773.1| recombination protein RecR [Acidothermus cellulolyticus 11B]
gi|171460820|sp|A0LWH7|RECR_ACIC1 RecName: Full=Recombination protein recR
gi|117649685|gb|ABK53787.1| DNA replication and repair protein RecR [Acidothermus
cellulolyticus 11B]
Length = 199
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L ++PG GP+SA+R H++ + LAE + ++ ++ C+ICGNV
Sbjct: 6 IQDLIDELGKLPGIGPKSAQRIAFHILGADPSQVRRLAEVLLDVKERIRFCAICGNVAEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +V+ VVE+ D+ A+E+++ + YHVLGG++SP+D IGP+D+ I+
Sbjct: 66 EQCRICADPRRDPTVLCVVEEPKDVVAIEKTREFHGRYHVLGGAISPIDGIGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++ELI A +EG+ TA Y+ +K + V++TRLA G+P+G +L+Y D+
Sbjct: 126 LLQRLADGTVKELILATDPNLEGEATATYLARLVKPLGVRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 TLGRALEGRRQL 197
>gi|257888431|ref|ZP_05668084.1| recombination protein recR [Enterococcus faecium 1,141,733]
gi|257897194|ref|ZP_05676847.1| recombination protein recR [Enterococcus faecium Com12]
gi|257899192|ref|ZP_05678845.1| recombination protein recR [Enterococcus faecium Com15]
gi|293379611|ref|ZP_06625748.1| recombination protein RecR [Enterococcus faecium PC4.1]
gi|293572058|ref|ZP_06683069.1| recombination protein RecR [Enterococcus faecium E980]
gi|257824485|gb|EEV51417.1| recombination protein recR [Enterococcus faecium 1,141,733]
gi|257833759|gb|EEV60180.1| recombination protein recR [Enterococcus faecium Com12]
gi|257837104|gb|EEV62178.1| recombination protein recR [Enterococcus faecium Com15]
gi|291607843|gb|EFF37154.1| recombination protein RecR [Enterococcus faecium E980]
gi|292641760|gb|EFF59933.1| recombination protein RecR [Enterococcus faecium PC4.1]
Length = 198
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD S+I+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCEICRNPSRDRSIILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDINISS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|123966421|ref|YP_001011502.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9515]
gi|171769727|sp|A2BX84|RECR_PROM5 RecName: Full=Recombination protein recR
gi|123200787|gb|ABM72395.1| RecR protein [Prochlorococcus marinus str. MIT 9515]
Length = 199
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N+
Sbjct: 6 KPLSKLIGHFEKFPGIGPRTAQRLALFILKQSESSIRDFSKALLEAHSNVGHCKKCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ + C IC + +R+ ++I VV + DL ALER++ +YHV+GG +SP+D IGPE + I
Sbjct: 66 SEEECDICRNAERNQNIICVVAETKDLLALERAREFKGVYHVIGGLISPMDSIGPEILEI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ +I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 126 RSLVERVSKSEIDEIILALTPSVEGDTTSLYI-GKLLTPFTKVTRIAYGLPMGSELEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLARALEGRTNL 198
>gi|284053205|ref|ZP_06383415.1| recombination protein RecR [Arthrospira platensis str. Paraca]
gi|291567039|dbj|BAI89311.1| recombination protein RecR [Arthrospira platensis NIES-39]
Length = 208
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 129/208 (62%), Gaps = 8/208 (3%)
Query: 1 MQKKITG-------KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
M ++I+G + + LI+ R+PG GP++A+R LH++K+ E+ + LA A+
Sbjct: 1 MYERISGGKTTVYTRPLARLIEQFQRLPGIGPKTAQRLALHIIKRPEEEVQALARALLEA 60
Query: 54 YNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGS 113
+V LC +C ++ C IC + QRD I VV D D+ ALE+++ LYHVLGG
Sbjct: 61 KKQVGLCQVCFHLSAEPVCEICRNPQRDRETICVVSDSRDVIALEKTREYRGLYHVLGGV 120
Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+SP+D IGPE + +Q L+ R+ +K +E+I A++ ++EG+TT Y+ LK ++TR+
Sbjct: 121 ISPMDGIGPEQLTVQPLVRRVSQQKFKEVIIAVNPSVEGETTTLYLGQLLKPF-TRVTRI 179
Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A+G+P+G +L+Y D+ T+ A+ R L
Sbjct: 180 AFGLPVGGDLEYADEVTLARALEGRREL 207
>gi|328883421|emb|CCA56660.1| Recombination protein RecR [Streptomyces venezuelae ATCC 10712]
Length = 204
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 11 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCAVCGNVAQQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 71 EQCNICRDPRRDLTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 131 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 190
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 191 TLGRAFEGRRLL 202
>gi|288926771|ref|ZP_06420681.1| recombination protein RecR [Prevotella buccae D17]
gi|288336452|gb|EFC74828.1| recombination protein RecR [Prevotella buccae D17]
Length = 203
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 127/198 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K+ +E + A++PG G ++A R LH +++ ++ + A A+ + ++V C
Sbjct: 1 MEKQYPSALLEKAVGEFAKLPGIGRKTALRLVLHTLRRNDEEVERFAAAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D++RD + + VVE+V D+ A+E ++ + +YHVLGG +SP+D I
Sbjct: 61 RVCHNISDTDICPICADERRDRTTVCVVENVQDVMAIENTQQFHGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL R+E + E+I A+S+T+EG TT YI +L+ VKIT +A GI +G
Sbjct: 121 GPGDIEIDSLCRRVEEGGVEEVILALSSTMEGDTTNFYISRRLQAAGVKITAIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
+EL+Y D+ T+ +I +R
Sbjct: 181 NELEYTDEVTLGRSIVNR 198
>gi|118445158|ref|YP_879265.1| recombination protein RecR [Clostridium novyi NT]
gi|118135614|gb|ABK62658.1| recombination protein RecR [Clostridium novyi NT]
Length = 201
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ + A A+ + CSICGN +
Sbjct: 11 IEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSICGNYTDS 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I V+E D+ +LE+ + N YHVL G +SP+ GPEDI ++
Sbjct: 71 DPCAICSNPNRDESIICVIEQPKDIMSLEKIREYNGTYHVLHGVISPMSGKGPEDINLKG 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 131 LIRRIN-ENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 190 TLSKALEGRVEL 201
>gi|294791168|ref|ZP_06756325.1| recombination protein RecR [Scardovia inopinata F0304]
gi|294457639|gb|EFG25993.1| recombination protein RecR [Scardovia inopinata F0304]
Length = 216
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 120/192 (62%), Gaps = 3/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NLI A +PG GP+ A+R HL+ + LA+++ + KV C ICGNV +
Sbjct: 22 IQNLIDRFASLPGIGPKGAQRIAFHLLSISQDDAQALADSIVEMKQKVRFCEICGNVCES 81
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC IC D +RD + I +V++ D+ ++ER+ LYHVLGG++ P+ IGP+D+ I
Sbjct: 82 SPCLICADPRRDHTTICLVQEPKDIMSIERTHEYRGLYHVLGGAIDPMSNIGPQDLKIAD 141
Query: 130 LIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R+ E K ++E+IFA++ IEG+ T Y+ L + + +TRLA G+PMGS+L+Y
Sbjct: 142 LLNRLKTPEGKNVKEIIFALNPDIEGEATTTYLSRLLGPLGITLTRLASGLPMGSDLEYA 201
Query: 187 DDGTIFEAIRSR 198
D+ T+ AI R
Sbjct: 202 DEITLGRAITGR 213
>gi|172044114|sp|A0Q3R3|RECR_CLONN RecName: Full=Recombination protein recR
Length = 198
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ + A A+ + CSICGN +
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSICGNYTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I V+E D+ +LE+ + N YHVL G +SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRDESIICVIEQPKDIMSLEKIREYNGTYHVLHGVISPMSGKGPEDINLKG 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIRRIN-ENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRVEL 198
>gi|330837780|ref|YP_004412421.1| DNA replication and repair protein RecR [Spirochaeta coccoides DSM
17374]
gi|329749683|gb|AEC03039.1| DNA replication and repair protein RecR [Spirochaeta coccoides DSM
17374]
Length = 196
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI+ L+R+PG GP+SA R HL+K Q LA+++ I + V C +CG+
Sbjct: 4 LDNLIQALSRLPGIGPKSAARIGYHLIKTNPQYNKELAKSIGTIQDVVFPCPVCGSYTEI 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC C D RD ++ VVE D+ + S + N LYHVLGG++SPLD IGPED+ S
Sbjct: 64 SPCRFCSDSSRDRELLCVVEQPQDVVTISTSGSYNGLYHVLGGAISPLDGIGPEDLSFDS 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
L+ RI +E+I A + T EG TTA YI +K D+ +TRLA G+P+G +L+Y D
Sbjct: 124 LMRRISEGSFQEVIIATNPTEEGDTTAMYIRHLMKDFPDIILTRLASGLPIGGDLEYADR 183
Query: 189 GTIFEAIRSR 198
T+ ++R R
Sbjct: 184 LTLARSLRGR 193
>gi|312887351|ref|ZP_07746952.1| recombination protein RecR [Mucilaginibacter paludis DSM 18603]
gi|311300154|gb|EFQ77222.1| recombination protein RecR [Mucilaginibacter paludis DSM 18603]
Length = 205
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 125/195 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E + +++PG G ++A R LHL+ ++++ + ++A++ + N++ C +C
Sbjct: 2 NFSSKLLEAAVAEFSKLPGVGQKTALRLVLHLLNQEKEEVESFSKAISKLRNEIQFCEVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +RD S++ VVED D+ A+E + N LYHVLG +SP+D IGP
Sbjct: 62 HNISDLPVCEICSAPKRDRSLVCVVEDTRDVMAVENTSQYNGLYHVLGALISPMDGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ + SLIER+ +++E+IFA+SAT+EG TT Y+ +LK ++ I+ +A GI G EL
Sbjct: 122 DLEVDSLIERLRTDEVKEVIFALSATMEGDTTIFYLHKRLKEFNIHISTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEITLGRSITTR 196
>gi|229083337|ref|ZP_04215697.1| hypothetical protein bcere0022_210 [Bacillus cereus Rock3-44]
gi|228699984|gb|EEL52609.1| hypothetical protein bcere0022_210 [Bacillus cereus Rock3-44]
Length = 198
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+++ N + CSICG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSICGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SVI VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICDDSHRDQSVICVVQEAKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|307332253|ref|ZP_07611333.1| recombination protein RecR [Streptomyces violaceusniger Tu 4113]
gi|306882114|gb|EFN13220.1| recombination protein RecR [Streptomyces violaceusniger Tu 4113]
Length = 199
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTQVKEKVRFCAVCGNVAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EQCRVCQDPRRDRAIICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLGRLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|67921773|ref|ZP_00515290.1| RecR protein [Crocosphaera watsonii WH 8501]
gi|67856365|gb|EAM51607.1| RecR protein [Crocosphaera watsonii WH 8501]
Length = 202
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V LC +C +
Sbjct: 11 LARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGLCKVCFHFSEQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD+ I VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ
Sbjct: 71 PICDICRNPNRDSQTICVVADARDVIALEKTREYRGKYHVLGGVMSPMDGIGPEQLYIQP 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ++E+I AIS T+EG+TT+ YI LK K+TR+A+G+PMG +L+Y D+
Sbjct: 131 LVRRVTQEGVKEVILAISPTVEGETTSLYIGQLLKPF-TKVTRIAFGLPMGGDLEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 190 TLARALEGRQEL 201
>gi|313885438|ref|ZP_07819188.1| recombination protein RecR [Eremococcus coleocola ACS-139-V-Col8]
gi|312619168|gb|EFR30607.1| recombination protein RecR [Eremococcus coleocola ACS-139-V-Col8]
Length = 198
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R +++ E+ + A+ + N+ ++ CS+CGN+ +
Sbjct: 7 IAKLINSFTKLPGIGSKTAARLAFYVLDMPERDVLEFAQNLINVKRELTYCSVCGNITDS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R I+VVED D+ ++ER + N LYHVL G LSP++ GP+D+ I S
Sbjct: 67 DPCPICQDPGRSHKEILVVEDARDVMSMERMQEYNGLYHVLHGVLSPMEGTGPDDLNIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+E I E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLEDPTIEEVIIATNATAEGEATAMYLARLIKPAGIKVTRLAHGLAVGSDIEYADEM 186
Query: 190 TIFEAIRSRTVL 201
T++ AI R L
Sbjct: 187 TLYRAIEGRREL 198
>gi|299820911|ref|ZP_07052800.1| recombination protein R [Listeria grayi DSM 20601]
gi|299817932|gb|EFI85167.1| recombination protein R [Listeria grayi DSM 20601]
Length = 204
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 13 ITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLGFAKALVDAKRNLSFCSVCGHITEQ 72
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD V+ VVE+ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 73 DPCYICADTTRDQHVVCVVEEPRDVIAMEKMRDYHGLYHVLHGTISPMDGIGPEDINIPD 132
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ I+E+I A + +EG+ TA YI +K +K+TR+A+G+P+G +L+Y D+
Sbjct: 133 LIKRLQDDTIQEVILATNPNVEGEATAMYISRLIKPSGIKVTRIAHGLPVGGDLEYADEV 192
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 193 TLSKALEGRREL 204
>gi|332291051|ref|YP_004429660.1| recombination protein RecR [Krokinobacter diaphorus 4H-3-7-5]
gi|332169137|gb|AEE18392.1| recombination protein RecR [Krokinobacter diaphorus 4H-3-7-5]
Length = 205
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 122/195 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+++ E L EA+ + + + C C
Sbjct: 2 EFSSKLLENAVYEMSQLPGVGKRTALRLVLHLLRQPETQTHHLTEALNTMRDTIKFCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + RD S++ VVEDV D+ A+E + LYHVLGG +SPLD IGP+
Sbjct: 62 HNISDVALCEICSNPNRDESIVCVVEDVRDVMAIENTSQYRGLYHVLGGKISPLDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLI+R + ++E+IFA+S+T+EG TT YI +L+ D+ + +A GI +G EL
Sbjct: 122 DLNIFSLIDRAKSGVVKEVIFALSSTMEGDTTNFYIYRQLEAYDIATSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILHR 196
>gi|315608945|ref|ZP_07883917.1| recombination protein R [Prevotella buccae ATCC 33574]
gi|315249325|gb|EFU29342.1| recombination protein R [Prevotella buccae ATCC 33574]
Length = 203
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 127/198 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K+ +E + A++PG G ++A R LH +++ ++ + A A+ + ++V C
Sbjct: 1 MEKQYPSALLEKAVGEFAKLPGIGRKTALRLVLHTLRRNDEEVERFAAAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D++RD + + VVE+V D+ A+E ++ + +YHVLGG +SP+D I
Sbjct: 61 RLCHNISDTDICPICADERRDRTTVCVVENVQDVMAIENTQQFHGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL R+E + E+I A+S+T+EG TT YI +L+ VKIT +A GI +G
Sbjct: 121 GPGDIEIDSLCRRVEEGGVEEVILALSSTMEGDTTNFYISRRLQAAGVKITAIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
+EL+Y D+ T+ +I +R
Sbjct: 181 NELEYTDEVTLGRSIVNR 198
>gi|218246033|ref|YP_002371404.1| recombination protein RecR [Cyanothece sp. PCC 8801]
gi|254790764|sp|B7K2B2|RECR_CYAP8 RecName: Full=Recombination protein recR
gi|218166511|gb|ACK65248.1| recombination protein RecR [Cyanothece sp. PCC 8801]
Length = 197
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+PG GP++A+R LH++K+ E + LA A+ KV LC++C +
Sbjct: 6 LARLIEQLQRLPGVGPKTAQRLALHILKRPENEIQALASALIEAKKKVGLCNVCFHFSAD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD I VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ
Sbjct: 66 PICEICRNPNRDKQTICVVADSRDVIALEKTREYKGRYHVLGGVMSPMDGIGPEQLYIQP 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+Y D+
Sbjct: 126 LVRRVTQDGVKEVILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLEYADEV 184
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 185 TLARALEGRREL 196
>gi|119025156|ref|YP_909001.1| recombination protein RecR [Bifidobacterium adolescentis ATCC
15703]
gi|166221925|sp|A0ZZN6|RECR_BIFAA RecName: Full=Recombination protein recR
gi|118764740|dbj|BAF38919.1| recombination protein recR [Bifidobacterium adolescentis ATCC
15703]
Length = 200
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +L+ ++ L +A+ + KV C ICGNV T
Sbjct: 9 IQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFCDICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD SVI VVE+ D+ ++ER++ +YHVLGG ++P+ + P D+ I
Sbjct: 69 SPCPVCADPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANVQPSDLNIAK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G +L+Y D+
Sbjct: 129 LIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|218437593|ref|YP_002375922.1| recombination protein RecR [Cyanothece sp. PCC 7424]
gi|259563689|sp|B7KEM9|RECR_CYAP7 RecName: Full=Recombination protein recR
gi|218170321|gb|ACK69054.1| recombination protein RecR [Cyanothece sp. PCC 7424]
Length = 199
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L R+PG GP++A+R LH++K+ E+ + LA+A+ +V LC +C ++ C
Sbjct: 9 LIEQLQRLPGVGPKTAQRLALHILKRPEEEVNTLAKAIVEAKKQVGLCQVCFHLSAESTC 68
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + RD + VV D D+ ALE+++ YHVLGG +SP+D IGPE + I L+
Sbjct: 69 EICRNPNRDNQTLCVVADSRDVIALEKTREYQGKYHVLGGVISPMDGIGPEQLNISPLVR 128
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ +I+E+I AIS ++EG+TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 129 RVSQHQIKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLA 187
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 188 RALEGRREL 196
>gi|116874069|ref|YP_850850.1| recombination protein RecR [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461474|sp|A0AM39|RECR_LISW6 RecName: Full=Recombination protein recR
gi|116742947|emb|CAK22071.1| recombination protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 198
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 7 ITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICSDTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ I E+I A + +EG+ TA YI L+ +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDTIEEVILATNPNVEGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKAMEGR 195
>gi|256419940|ref|YP_003120593.1| recombination protein RecR [Chitinophaga pinensis DSM 2588]
gi|256034848|gb|ACU58392.1| recombination protein RecR [Chitinophaga pinensis DSM 2588]
Length = 205
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IEN + AR+PG G ++A R LHL+K+ + E + + ++ C +C NV
Sbjct: 8 IENAVNEFARLPGIGKKTALRLVLHLLKQDPAQVKLFGEVVTRMREQIKFCKVCHNVSDQ 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC R+ +++ VVE++ D+ A+E ++ N +YHVLGG +SP+D IGPE + I S
Sbjct: 68 EVCSICSSPSRNKALVCVVENIRDVMAIENTQQFNGVYHVLGGIISPIDGIGPEQLNIYS 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + I E+I A+S TIEG TT +Y+ KLK KIT +A GI G EL+Y D+
Sbjct: 128 LVDRVQQQGIDEIIMALSPTIEGDTTIYYLSKKLKEFPCKITTIARGIAFGGELEYADEM 187
Query: 190 TIFEAIRSRTVL 201
T+ +I +R L
Sbjct: 188 TLARSISNRLPL 199
>gi|212717035|ref|ZP_03325163.1| hypothetical protein BIFCAT_01982 [Bifidobacterium catenulatum DSM
16992]
gi|212660023|gb|EEB20598.1| hypothetical protein BIFCAT_01982 [Bifidobacterium catenulatum DSM
16992]
Length = 201
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +L+ ++ L +A+ + K+ C ICGNV T
Sbjct: 9 IQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLVDAITEVKEKIRFCDICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC IC+D +RD SVI VVE+ D+ ++ER++ LYHVLGG ++P+ + P D+ I
Sbjct: 69 SPCPICVDPRRDHSVICVVEEPKDVMSIERTREYRGLYHVLGGVINPMANVQPSDLNIAK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++ E+I A++ +EG+ T ++ L D+ +TRLA G+P+G +L+Y D+
Sbjct: 129 LIERLKDSEVTEVILALNPNVEGEATTSFLSQLLSQTDITVTRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|256848134|ref|ZP_05553578.1| recombination protein RecR [Lactobacillus coleohominis 101-4-CHN]
gi|256715194|gb|EEU30171.1| recombination protein RecR [Lactobacillus coleohominis 101-4-CHN]
Length = 199
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + E + ++A+ + + CSICGN+
Sbjct: 7 IAKLIASYMKLPGIGEKTATRLAFYTIGMDEDDVKDFSKALVAVKEDLHYCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ RD + I+VVE+ D+ A+ER + LYHVL G++SP + GP DI I S
Sbjct: 67 DPCPICKDQGRDQTTIVVVENSRDVMAMERMNEYHGLYHVLHGTISPSEGTGPMDINIPS 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LIER++ +++E+I A +A+++G+TTA Y+ LK +K+TRLA+G+ G+++DY D+
Sbjct: 127 LIERLKKHSEVQEVIIATNASMDGETTAQYLAKLLKPAGIKVTRLAHGLSAGADIDYTDE 186
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 187 VTLFKAVQGRT 197
>gi|325962020|ref|YP_004239926.1| DNA replication and repair protein RecR [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468107|gb|ADX71792.1| DNA replication and repair protein RecR [Arthrobacter
phenanthrenivorans Sphe3]
Length = 199
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ Q + L EA+ + +V C++CGNV
Sbjct: 6 VQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKERVKFCTVCGNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE + I+
Sbjct: 66 ELCNICRDPRRDPAVICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLNDGAIQEVIIATDPNLEGEATATYLARMLKTIGITVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|84495158|ref|ZP_00994277.1| recombination protein RecR [Janibacter sp. HTCC2649]
gi|84384651|gb|EAQ00531.1| recombination protein RecR [Janibacter sp. HTCC2649]
Length = 199
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + + L +A+ + KV C C N+ +
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLTQDAVDVQRLVDALTQVKVKVRFCVTCFNIAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D+ +
Sbjct: 66 EQCRICADPRRDLTSICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPDDLTFRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A +EG+ TA Y+ LKG+D+K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLASSDVTEIIIATDPNLEGEATASYLARFLKGMDIKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|168187926|ref|ZP_02622561.1| recombination protein RecR [Clostridium botulinum C str. Eklund]
gi|169294228|gb|EDS76361.1| recombination protein RecR [Clostridium botulinum C str. Eklund]
Length = 198
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+CGN +
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSVCGNYTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGPEDINLKG 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIRRIN-ENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRVEL 198
>gi|154495882|ref|ZP_02034578.1| hypothetical protein BACCAP_00162 [Bacteroides capillosus ATCC
29799]
gi|150275080|gb|EDN02128.1| hypothetical protein BACCAP_00162 [Bacteroides capillosus ATCC
29799]
Length = 200
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ ++PG G +SA+R +++ ++ A+A+ + + C +C N+
Sbjct: 8 LEKLVEQFHKLPGIGHKSAQRLAFYMLSLPDEDAAAFAQAITDAKRAISFCPVCQNLTEG 67
Query: 70 D-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ PCAIC +RD S + VV D D+ +ERS+ N LYHVL G +SP++ +GP+D+ I+
Sbjct: 68 EGPCAICQSPKRDRSTVCVVADPKDVITMERSREYNGLYHVLHGVISPMNHVGPDDLHIK 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
SL+ER+ +++E+I A + EG+ TA Y+ LK VK+TRLAYGIP+GS L++ DD
Sbjct: 128 SLVERVGSGEVKEVIMATNPDTEGEATAMYLSRLLKPFQVKVTRLAYGIPVGSHLEFADD 187
Query: 189 GTIFEAIRSR 198
T+ A+ R
Sbjct: 188 ATLMRALEGR 197
>gi|330722042|gb|EGG99965.1| Recombination protein RecR [gamma proteobacterium IMCC2047]
Length = 199
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GP+SA+R LHL+++ + LA+ +A +V C C + T
Sbjct: 7 VDQLIDALRCLPGVGPKSAQRMALHLLERDREGAFRLAQKLAESIKEVGHCQQCRILCET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDA+ + VVE D+ A+E++ Y VL G LSP+D IGP+DIGI
Sbjct: 67 ELCRICADPKRDAAKLCVVESPMDVMAIEQTNLFRGRYFVLMGHLSPIDGIGPQDIGIDL 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+E+++ ++ ELI A + T+EG+ TAHYI +L+ +V ITR+A+G+P+G EL+++D G
Sbjct: 127 LVEQVKENQVEELIMATNPTVEGEATAHYIAAQLESPNVTITRIAHGVPLGGELEFVDGG 186
Query: 190 TIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 TLAHALQGRQTL 198
>gi|254412067|ref|ZP_05025842.1| recombination protein RecR [Microcoleus chthonoplastes PCC 7420]
gi|196181033|gb|EDX76022.1| recombination protein RecR [Microcoleus chthonoplastes PCC 7420]
Length = 189
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ L R+PG GP++A+R LH++K+ E + LA+A+ +V LC +C ++ C
Sbjct: 1 MIEQLQRLPGVGPKTAQRLALHIIKRSEDEVKALAQALIEAKKQVGLCQVCFHLSAESVC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + RD + + VV D D+ ALE+++ YHVLGG +SP+D IGPE + ++ L+
Sbjct: 61 DICRNPNRDKTTLCVVADSRDVIALEKTREYRGNYHVLGGVISPMDGIGPEQLHVEQLVR 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ +KI+E+I AIS ++EG+TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 121 RVSQQKIQEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLA 179
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 180 RALEGRREL 188
>gi|257059083|ref|YP_003136971.1| recombination protein RecR [Cyanothece sp. PCC 8802]
gi|256589249|gb|ACV00136.1| recombination protein RecR [Cyanothece sp. PCC 8802]
Length = 197
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+PG GP++A+R LH++K+ E + LA A+ KV LC++C +
Sbjct: 6 LARLIEQLQRLPGVGPKTAQRLALHILKRPENEIQALATALIEAKKKVGLCNVCFHFSAD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD I VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ
Sbjct: 66 PICEICRNPNRDKQTICVVADSRDVIALEKTREYKGRYHVLGGVMSPMDGIGPEQLYIQP 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+Y D+
Sbjct: 126 LVRRVTQDGVKEVILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLEYADEV 184
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 185 TLARALEGRREL 196
>gi|126656915|ref|ZP_01728093.1| recombination protein RecR [Cyanothece sp. CCY0110]
gi|126621753|gb|EAZ92462.1| recombination protein RecR [Cyanothece sp. CCY0110]
Length = 202
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V LC +C +
Sbjct: 11 LARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGLCKVCFHFSEQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD+ + VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ+
Sbjct: 71 PICDICRNPNRDSQTVCVVADSRDVIALEKTREYRGKYHVLGGVMSPMDGIGPEQLYIQA 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + I+E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+Y D+
Sbjct: 131 LVRRVTQEGIKEIILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 190 TLARALEGRREL 201
>gi|125974629|ref|YP_001038539.1| recombination protein RecR [Clostridium thermocellum ATCC 27405]
gi|281419177|ref|ZP_06250194.1| recombination protein RecR [Clostridium thermocellum JW20]
gi|171769989|sp|A3DHB7|RECR_CLOTH RecName: Full=Recombination protein recR
gi|125714854|gb|ABN53346.1| recombination protein RecR [Clostridium thermocellum ATCC 27405]
gi|281407326|gb|EFB37587.1| recombination protein RecR [Clostridium thermocellum JW20]
gi|316941747|gb|ADU75781.1| recombination protein RecR [Clostridium thermocellum DSM 1313]
Length = 199
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A+R +++ ++ + LA A+ K CS+CGN+ T
Sbjct: 8 IARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSVCGNLTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C +C ++RD+SVI VVED D+ A+E+ + LYHVL G++SP+ IGPEDI I+
Sbjct: 68 DVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPEDIKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++RI+ ++E+I A + IEG+ TA YI +K + VK TR+A+GIP+G +L+Y D+
Sbjct: 128 LLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLAKALEGR 196
>gi|306821329|ref|ZP_07454938.1| recombination protein R [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550616|gb|EFM38598.1| recombination protein R [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 200
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K IENLI+ L+++PG G ++A+R H++ +++ L+ ++ K+ CSIC N+
Sbjct: 5 SKPIENLIRQLSKLPGIGQKTAQRLAFHIINMEDEDAKALSSSILEAKEKIQFCSICQNI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++PC IC +R VI VVE ++ A+E+SK N YHVL G++SP + I P+ +
Sbjct: 65 ADSNPCEICSSTERSGEVICVVESPREVIAMEKSKEFNGKYHVLHGTISPSNSITPDMLK 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ER+ I+E+I A + TI+G+ TA YI LK +KITR+A G+PMG++++Y
Sbjct: 125 IRELVERLASDDIKEVILATNPTIDGEATAMYIARLLKPFGIKITRIARGLPMGADIEYA 184
Query: 187 DDGTIFEAIRSR 198
D+ TI +A+ +R
Sbjct: 185 DEVTITKALENR 196
>gi|260912246|ref|ZP_05918798.1| recombination protein R [Prevotella sp. oral taxon 472 str. F0295]
gi|260633680|gb|EEX51818.1| recombination protein R [Prevotella sp. oral taxon 472 str. F0295]
Length = 204
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 126/199 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + +R+PG G ++A R LHL+K + + + + ++ + + C
Sbjct: 1 MEQQYPSALLEKAVSEFSRLPGIGRKTALRLVLHLLKTRVEDVESFSSSILKVRKDIKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ CAIC + +RDA+ I VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 61 QLCHNISDTETCAICANPRRDAATICVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL+ER+ + E+I A+S+T+EG TT +YI K+ VK + +A GI +G
Sbjct: 121 GPNDIEINSLVERVANGGVNEVILALSSTMEGDTTNYYISRKIAPYKVKTSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYTDEVTLGRSILNRT 199
>gi|189466061|ref|ZP_03014846.1| hypothetical protein BACINT_02426 [Bacteroides intestinalis DSM
17393]
gi|189434325|gb|EDV03310.1| hypothetical protein BACINT_02426 [Bacteroides intestinalis DSM
17393]
Length = 205
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 126/199 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFSSILLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCRICANPQRDDSTVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVQRVSAGGIKEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRT 199
>gi|124026189|ref|YP_001015305.1| RecR protein [Prochlorococcus marinus str. NATL1A]
gi|123961257|gb|ABM76040.1| RecR protein [Prochlorococcus marinus str. NATL1A]
Length = 182
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E + +EA+ N ++V C C ++ + C IC+++Q
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEDKIRLFSEALLNAKSQVGQCKTCFHLTAGEQCEICLNKQ 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R+ +I VV + DL ALER++ LYHV+GG +SP+D IGPE + I SLI+R++ I
Sbjct: 61 RNQELICVVSESRDLLALERTREYKGLYHVIGGLISPMDGIGPEMLEISSLIKRVDKANI 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+E+I A++ +IEG TT+ Y+ LK K+TR+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 KEVILALTPSIEGDTTSLYVGRLLKPF-TKVTRIAYGLPVGSELEYADEVTLSRALEGR 178
>gi|209522777|ref|ZP_03271335.1| recombination protein RecR [Arthrospira maxima CS-328]
gi|209496826|gb|EDZ97123.1| recombination protein RecR [Arthrospira maxima CS-328]
Length = 208
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ R+PG GP++A+R LH++K+ E+ + LA A+ +V LC +C ++
Sbjct: 15 RPLARLIEQFQRLPGIGPKTAQRLALHIIKRPEEEVQALARALLEAKKQVGLCQVCFHLS 74
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + QRD I VV D D+ ALE+++ LYHVLGG +SP+D IGPE + +
Sbjct: 75 AEPVCEICRNPQRDRETICVVSDSRDVIALEKTREYRGLYHVLGGVISPMDGIGPEQLTV 134
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L+ R+ ++++E+I A++ ++EG+TT Y+ LK ++TR+A+G+P+G +L+Y D
Sbjct: 135 QPLVRRVSQQQVKEVIIAVNPSVEGETTTLYLGQLLKPF-TRVTRIAFGLPVGGDLEYAD 193
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R L
Sbjct: 194 EVTLARALEGRREL 207
>gi|228989234|ref|ZP_04149228.1| hypothetical protein bpmyx0001_140 [Bacillus pseudomycoides DSM
12442]
gi|228995417|ref|ZP_04155088.1| hypothetical protein bmyco0003_230 [Bacillus mycoides Rock3-17]
gi|229003031|ref|ZP_04160889.1| hypothetical protein bmyco0002_240 [Bacillus mycoides Rock1-4]
gi|228758231|gb|EEM07418.1| hypothetical protein bmyco0002_240 [Bacillus mycoides Rock1-4]
gi|228764343|gb|EEM13219.1| hypothetical protein bmyco0003_230 [Bacillus mycoides Rock3-17]
gi|228770509|gb|EEM19079.1| hypothetical protein bpmyx0001_140 [Bacillus pseudomycoides DSM
12442]
Length = 198
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+++ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICDDSHRDQSVVCVVQEAKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|94271396|ref|ZP_01291948.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|93450456|gb|EAT01636.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
Length = 203
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 125/191 (65%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI ++PG G +SA R LHL+++ LA ++ ++ + +CS C
Sbjct: 8 LERLIADFGKLPGIGRKSATRLALHLLRRPALEAQGLARSLHELHQLITMCSSCCAFSEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RDAS++ VVE+ DL A+E++ + YH+L G+LSP+D IGP+++ I
Sbjct: 68 DPCEICRNPGRDASLVCVVEEPGDLLAIEKTSSYKGRYHILHGALSPMDGIGPKELKIGL 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDYLD 187
L+ERI+ +++RE++ A S+T+ G+ TA Y++D+L+ V++TRLAYGIPMG ++ Y D
Sbjct: 128 LLERIKREQVREVLIATSSTVPGEATASYLIDQLQQHTTGVRLTRLAYGIPMGMDIKYAD 187
Query: 188 DGTIFEAIRSR 198
+ T+ AI +R
Sbjct: 188 ELTLARAIETR 198
>gi|331701732|ref|YP_004398691.1| Recombination protein recR [Lactobacillus buchneri NRRL B-30929]
gi|329129075|gb|AEB73628.1| Recombination protein recR [Lactobacillus buchneri NRRL B-30929]
Length = 199
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + V E + ++A+ N + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGSKTATRLAFYTVDMNEDDVKAFSKALVATKNDLHYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE+ D+ +E+ + + LYHVL G LSP++ GPED+ I S
Sbjct: 67 DPCEICRDKTRDQSTILVVEEPKDVMVMEKVQEYHGLYHVLHGVLSPIEGKGPEDLNISS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLQQNKAVKEVIVATNATPEGEATAMYLSKLIKPAGIKVTRLAHGLSVGSDIEYADE 186
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 187 VTLFKAVQGRT 197
>gi|119476223|ref|ZP_01616574.1| recombination protein RecR [marine gamma proteobacterium HTCC2143]
gi|119450087|gb|EAW31322.1| recombination protein RecR [marine gamma proteobacterium HTCC2143]
Length = 199
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L++ L +PG GP+SA+R HL+++ + LAE + + V CS C +
Sbjct: 7 IDQLVEALRCLPGVGPKSAQRMAFHLLERDREGGLKLAEQLDTAMHGVARCSSCRTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC + +RD + I VVE AD++A E+S LY VL G LSP+D IGP +IG+
Sbjct: 67 PRCSICDNFKRDRTTICVVETPADVFAFEQSGIYRGLYFVLMGHLSPIDGIGPAEIGVSD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++I+E+I A + T+EG+ TA+YI +++K + K++R+A+G+P+G EL+Y+D G
Sbjct: 127 LLQRLQEEEIQEVILATNPTVEGEATAYYITEQVKSMGAKVSRIAHGVPLGGELEYVDSG 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R ++
Sbjct: 187 TLAHALNGRRLV 198
>gi|331270684|ref|YP_004397176.1| recombination protein RecR [Clostridium botulinum BKT015925]
gi|329127234|gb|AEB77179.1| recombination protein RecR [Clostridium botulinum BKT015925]
Length = 201
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+CGN +
Sbjct: 11 IEKLIEEFAKLPGIGYKTAQRLTLHVLNLPNDEVREFANALVKARGTIRYCSVCGNYTDS 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GPEDI ++
Sbjct: 71 DPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGPEDINLKG 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI+ +++E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G +L+Y D+
Sbjct: 131 LITRIK-GEVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGIPVGGDLEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 190 TLSKALEGRVEL 201
>gi|119510774|ref|ZP_01629900.1| RecR protein [Nodularia spumigena CCY9414]
gi|119464537|gb|EAW45448.1| RecR protein [Nodularia spumigena CCY9414]
Length = 185
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP+SA+R LH++K+ E + LA+A+ + ++ LCS+C ++ C IC
Sbjct: 1 MQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIDAKKQIGLCSVCFHLSADPVCEICR 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
RD + I VV D DL ALE+++ YHVLGG +SP+D IGPE + IQ+L+ R+
Sbjct: 61 HPNRDDTSICVVADSRDLIALEKTREYKGKYHVLGGVISPMDGIGPEQLTIQALVRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+K +E+I AIS TIEG+TT YI LK K+TR+A+G+P+G +L+Y D+ T+ A+
Sbjct: 121 QKTQEVIMAISPTIEGETTTLYIGQLLKPF-TKVTRIAFGLPVGGDLEYADEVTLARALE 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRREL 184
>gi|225351266|ref|ZP_03742289.1| hypothetical protein BIFPSEUDO_02858 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158722|gb|EEG71964.1| hypothetical protein BIFPSEUDO_02858 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 200
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +L+ ++ L +A+ + K+ C ICGNV T
Sbjct: 9 IQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLIDAITEVKEKIRFCDICGNVCET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG ++P+ + P D+ I
Sbjct: 69 SPCPVCADPRRDHSVICVVEESKDVMSIERTREYRGLYHVLGGVINPMANVQPSDLNIAK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ ++ E+I A++ +EG+ T ++ L D+K+TRLA G+P+G +L+Y D+
Sbjct: 129 LIERLKDSEVAEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLGRALAGR 197
>gi|150019757|ref|YP_001312011.1| recombination protein RecR [Clostridium beijerinckii NCIMB 8052]
gi|149906222|gb|ABR37055.1| recombination protein RecR [Clostridium beijerinckii NCIMB 8052]
Length = 199
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++P G ++A+R TLH++ + + A+A+ V CS+CGN
Sbjct: 9 IEKLIEEFAKLPSIGQKTAQRLTLHILNLPDDEVKEFADALVKAKGTVKYCSVCGNFTDK 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C + RD I VVE D+ +E+ K N +YHVL G++SP+ GP+DI I+
Sbjct: 69 DPCALCGNPNRDKGTICVVEQPKDIMTMEKVKEYNGVYHVLHGNISPMQGRGPQDIRIRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +LDY D+
Sbjct: 129 LVSRMN-EDVKEVILATNPNIEGEATAMYISKILKPLDVKVTRIASGIPVGGDLDYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLSKALEGR 196
>gi|253682739|ref|ZP_04863535.1| recombination protein RecR [Clostridium botulinum D str. 1873]
gi|253561061|gb|EES90514.1| recombination protein RecR [Clostridium botulinum D str. 1873]
Length = 198
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+CGN +
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLHVLNLPNDEVREFANALVKARGTIRYCSVCGNYTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGPEDINLKG 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI+ +++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 128 LITRIK-GEVKEIIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLSKALEGRVEL 198
>gi|163938033|ref|YP_001642917.1| recombination protein RecR [Bacillus weihenstephanensis KBAB4]
gi|229009535|ref|ZP_04166764.1| hypothetical protein bmyco0001_140 [Bacillus mycoides DSM 2048]
gi|229053871|ref|ZP_04195308.1| hypothetical protein bcere0026_140 [Bacillus cereus AH603]
gi|229131032|ref|ZP_04259947.1| hypothetical protein bcere0014_130 [Bacillus cereus BDRD-ST196]
gi|229165014|ref|ZP_04292812.1| hypothetical protein bcere0007_140 [Bacillus cereus AH621]
gi|229890127|sp|A9VN38|RECR_BACWK RecName: Full=Recombination protein recR
gi|163860230|gb|ABY41289.1| recombination protein RecR [Bacillus weihenstephanensis KBAB4]
gi|228618466|gb|EEK75493.1| hypothetical protein bcere0007_140 [Bacillus cereus AH621]
gi|228652427|gb|EEL08349.1| hypothetical protein bcere0014_130 [Bacillus cereus BDRD-ST196]
gi|228721481|gb|EEL72998.1| hypothetical protein bcere0026_140 [Bacillus cereus AH603]
gi|228751746|gb|EEM01543.1| hypothetical protein bmyco0001_140 [Bacillus mycoides DSM 2048]
Length = 198
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICDDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|72382490|ref|YP_291845.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. NATL2A]
gi|72002340|gb|AAZ58142.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. NATL2A]
Length = 182
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E + +EA+ N ++V C C ++ + C IC+++Q
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEYKIRLFSEALLNAKSQVGQCKTCFHLTAGEQCEICLNKQ 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R+ +I VV + DL ALER++ LYHV+GG +SP+D IGPE + I SLI+R++ I
Sbjct: 61 RNQELICVVSESRDLLALERTREYKGLYHVIGGLISPMDGIGPEMLEISSLIKRVDKANI 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+E+I A++ +IEG TT+ Y+ LK K+TR+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 KEVILALTPSIEGDTTSLYVGRLLKPF-TKVTRIAYGLPVGSELEYADEVTLSRALEGR 178
>gi|90962201|ref|YP_536117.1| recombination protein RecR [Lactobacillus salivarius UCC118]
gi|227891206|ref|ZP_04009011.1| recombination protein [Lactobacillus salivarius ATCC 11741]
gi|301300449|ref|ZP_07206649.1| recombination protein RecR [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122448749|sp|Q1WSU5|RECR_LACS1 RecName: Full=Recombination protein recR
gi|90821395|gb|ABE00034.1| Recombination protein [Lactobacillus salivarius UCC118]
gi|227867080|gb|EEJ74501.1| recombination protein [Lactobacillus salivarius ATCC 11741]
gi|300214870|gb|ADJ79286.1| Recombination protein recR [Lactobacillus salivarius CECT 5713]
gi|300851946|gb|EFK79630.1| recombination protein RecR [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 199
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + +E + A+++ + + CSICGN+ +
Sbjct: 7 ISKLIDSYMKLPGIGSKTATRLAFYTIDMQEDDVTEFAQSLISAKRDLSYCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVE D+ +LER + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCMICADKSRDNSKVVVVEQPKDVMSLERMNEYHGLYHVLHGVLSPIEGKGPEDINIAS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + I+E+I A +AT EG+ TA YI +K ++K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLRRLQKNEAIKEVIIATNATPEGEATAMYIARLVKPANIKVTRLAHGLAVGSDIEYADE 186
Query: 189 GTIFEAIRSR 198
T+F+AI R
Sbjct: 187 MTLFKAIEGR 196
>gi|319902361|ref|YP_004162089.1| DNA replication and repair protein RecR [Bacteroides helcogenes P
36-108]
gi|319417392|gb|ADV44503.1| DNA replication and repair protein RecR [Bacteroides helcogenes P
36-108]
Length = 205
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 124/190 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ + A+ + ++V C +C N+ T
Sbjct: 10 LEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTMAVEAFGNAIITLKHEVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD+SV+ VVE++ D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 70 EICRICSNPQRDSSVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGIGPGDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVSSGDIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|237755840|ref|ZP_04584438.1| recombination protein RecR [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692005|gb|EEP61015.1| recombination protein RecR [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 200
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 126/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ +I ++R+PG+G ++A+R ++L+K + L +A + +KV LC CG
Sbjct: 8 IQQVISEISRLPGYGEKTAQRLAVNLLKMPKGEAVDLVRHLALMLDKVHLCRECGIFTEK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D+ RD SVI VVE+ D + +E + N LYHVLGG LSPL+ IGPE + I+S
Sbjct: 68 EICDVCSDESRDRSVICVVEESFDAFMIENTDKYNGLYHVLGGRLSPLEGIGPEKLNIKS 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+RI+ ++E+IFA + T+EG+ TA+YI + +K + I+RLAYG+P G L+ DD
Sbjct: 128 LIDRIKKLNVKEIIFATNPTVEGEATANYIHNLIKNYPITISRLAYGLPFGGILENADDF 187
Query: 190 TIFEAIRSRTVL 201
T+ +A+ ++ +L
Sbjct: 188 TLAKALENKQIL 199
>gi|295837978|ref|ZP_06824911.1| recombination protein RecR [Streptomyces sp. SPB74]
gi|197699471|gb|EDY46404.1| recombination protein RecR [Streptomyces sp. SPB74]
Length = 199
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ERCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|16801910|ref|NP_472178.1| recombination protein RecR [Listeria innocua Clip11262]
gi|20139521|sp|Q927D9|RECR_LISIN RecName: Full=Recombination protein recR
gi|16415385|emb|CAC98076.1| recR [Listeria innocua Clip11262]
gi|313616686|gb|EFR89470.1| recombination protein RecR [Listeria innocua FSL S4-378]
Length = 198
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 7 ITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICSDTSRDRSVLCVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ I E+I A + +EG+ TA YI L+ +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDDTIEEVILATNPNVEGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKAMEGR 195
>gi|333026055|ref|ZP_08454119.1| putative recombination protein RecR [Streptomyces sp. Tu6071]
gi|332745907|gb|EGJ76348.1| putative recombination protein RecR [Streptomyces sp. Tu6071]
Length = 195
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCGNVAQE 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 62 EHCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 122 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 181
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 182 TLGRAFEGRRLL 193
>gi|78189156|ref|YP_379494.1| recombination protein RecR [Chlorobium chlorochromatii CaD3]
gi|123579732|sp|Q3ARC4|RECR_CHLCH RecName: Full=Recombination protein recR
gi|78171355|gb|ABB28451.1| RecR protein [Chlorobium chlorochromatii CaD3]
Length = 204
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 130/197 (65%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
++ LI A++PG G ++A+R ++++ + + LA+A+ ++ KV C+IC N+
Sbjct: 8 LDTLIDEFAKLPGIGRKTAQRLAMYILHEPKIEAEQLAKALLDVKEKVVRCTICQNITDV 67
Query: 69 -TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPCAIC + RD +VI VVE D+ A E++ LYHVL G +SPLD +GP+DI +
Sbjct: 68 GTDPCAICASKARDRTVICVVESPVDMLAFEKTGHYKGLYHVLHGVISPLDGVGPDDIKV 127
Query: 128 QSLIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L+ RI E +RE++ A++ TIEG+TT+ Y+ LK + + +T++A GIP+G+EL+
Sbjct: 128 RELLARIPVGEASGVREVVLALNPTIEGETTSLYLARLLKPLGIAVTKIARGIPVGAELE 187
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D+ T+ A+ RTV+
Sbjct: 188 YVDEATLSRAMEGRTVV 204
>gi|159030384|emb|CAO91280.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 203
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L ++PG GP+SA+R L+++K+ EQ LA+A+ +V LC +C ++
Sbjct: 13 LARLIEQLQKLPGVGPKSAQRLALYILKRPEQDAIELAQAIVAAKKQVGLCQVCFHLSAE 72
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + R+ I VV D D+ ALE+++ + YHVLGG +SP+D IGP+ + IQS
Sbjct: 73 PICEICRNPNRETGTICVVADSRDVIALEKTREYSGKYHVLGGVISPMDGIGPDQLNIQS 132
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ KKI+E+I AIS ++EG+TT YI LK K+TR+A+G+PMG +L+Y D+
Sbjct: 133 LVTRVSQKKIQEVILAISPSVEGETTTLYIGGLLKPF-TKVTRIAFGLPMGGDLEYADEV 191
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 192 TLARALEGR 200
>gi|110598754|ref|ZP_01387015.1| recombination protein RecR [Chlorobium ferrooxidans DSM 13031]
gi|110339618|gb|EAT58132.1| recombination protein RecR [Chlorobium ferrooxidans DSM 13031]
Length = 204
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI+ A++PG G ++A+R ++++ + LA A+ ++ +KV CS+C
Sbjct: 2 RYTSAAIEALIEEFAKLPGVGRKTAQRLAMYVLHEPRAEAEKLASALLDVKDKVIRCSVC 61
Query: 64 GNV--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV +DPCA+C + RD SVI VVE D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDKESDPCAVCSSRARDRSVICVVESPVDMLAFEKTGFYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ R E +++E++ A++ TIEG+TT+ Y+ LK + V++T++A GIP
Sbjct: 122 PDDIKVRELLVRFSGQESGEVKEVVLALNPTIEGETTSLYLSKLLKPLGVQVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 VGAELEFVDEATLSRAMEGRSAM 204
>gi|220911470|ref|YP_002486779.1| recombination protein RecR [Arthrobacter chlorophenolicus A6]
gi|219858348|gb|ACL38690.1| recombination protein RecR [Arthrobacter chlorophenolicus A6]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ Q + L EA+ + ++V C++CGNV
Sbjct: 6 VQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKDRVKFCTVCGNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD ++I VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE + I+
Sbjct: 66 ELCNICRDPRRDPALICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLNDGAIQEVIIATDPNLEGEATATYLARMLKTIGIAVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|226309653|ref|YP_002769547.1| recombination protein RecR [Brevibacillus brevis NBRC 100599]
gi|254790755|sp|C0ZHA2|RECR_BREBN RecName: Full=Recombination protein recR
gi|226092601|dbj|BAH41043.1| recombination protein RecR [Brevibacillus brevis NBRC 100599]
Length = 198
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI ++PG GP++A R ++ KE + LA+A+ N ++ CS+C N+
Sbjct: 7 VSKLIDGFMKLPGIGPKTAGRLAFFVLNMKEDDVLDLAKALVNAKRQLHYCSVCNNITDL 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD S+I VV++ D+ A+E+++ YHVL G++SP+D IGPEDI I
Sbjct: 67 DPCHICRDKRRDGSIICVVQEPRDVVAMEKTREFEGYYHVLHGAISPMDGIGPEDIRIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++++E+I A + IEG+ TA YI +K +++TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLGDEQVKEVILATNPNIEGEATAMYISRLIKPFGIRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLTKALEGR 195
>gi|302520196|ref|ZP_07272538.1| recombination protein RecR [Streptomyces sp. SPB78]
gi|318061709|ref|ZP_07980430.1| recombination protein RecR [Streptomyces sp. SA3_actG]
gi|318078458|ref|ZP_07985790.1| recombination protein RecR [Streptomyces sp. SA3_actF]
gi|302429091|gb|EFL00907.1| recombination protein RecR [Streptomyces sp. SPB78]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 EHCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|170078351|ref|YP_001734989.1| recombination protein [Synechococcus sp. PCC 7002]
gi|169886020|gb|ACA99733.1| recombination protein [Synechococcus sp. PCC 7002]
Length = 189
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ R+PG GP++A+R L+++K+ E+ + A+A+ N +V +C C ++ T C
Sbjct: 1 MIEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + QR+ VI VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ+L++
Sbjct: 61 DICRNPQREPDVICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQ 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ +K +E+I AI+ ++EG+TT Y+ L+ K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 121 RVSAEKTKEVILAINPSVEGETTTLYLAQLLRPF-TKVTRIAFGLPMGGDLEYADEVTLA 179
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 180 RALEGRREL 188
>gi|311897062|dbj|BAJ29470.1| putative recombination protein RecR [Kitasatospora setae KM-6054]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + LA A+ + KV C++CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQADPVDVRRLAHALQQVKEKVRFCAVCGNVAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C+D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ERCRVCLDPRRDLAVICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGTVTELILATDPNLEGEATATYLARLCKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|261880555|ref|ZP_06006982.1| recombination protein R [Prevotella bergensis DSM 17361]
gi|270332779|gb|EFA43565.1| recombination protein R [Prevotella bergensis DSM 17361]
Length = 201
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 128/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + ++PG G +++ R L+L+++ + ++A++ + N + C IC N+ T
Sbjct: 9 LEKAVSEFCKLPGIGRKTSLRLVLYLLRQPVNRVNAFSDAISYVRNNIKYCKICHNISDT 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +RD++ + VVE++ D+ A+E ++ + LYHVLGG +SP+D I P D+ I S
Sbjct: 69 EVCSICSDTRRDSTTVCVVENIQDVMAVESTQQYHGLYHVLGGVISPMDGISPGDLQIDS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ +I+E+IFA+S+T+EG TT Y+ LK DVK++ +A GI +G+EL+Y D+
Sbjct: 129 LVERVARGEIKEIIFALSSTMEGDTTNFYLSRLLKKYDVKLSLIARGISVGNELEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT L
Sbjct: 189 TLGRSILNRTPL 200
>gi|326802967|ref|YP_004320785.1| recombination protein RecR [Aerococcus urinae ACS-120-V-Col10a]
gi|326651053|gb|AEA01236.1| recombination protein RecR [Aerococcus urinae ACS-120-V-Col10a]
Length = 198
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R ++ + + AEA+ + ++ CS+CGNV
Sbjct: 7 IARLIDSFKKLPGIGAKTAARLAFFVLDMDQADVNDFAEALNRVKQEMTTCSVCGNVTQE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R+ SV++VVE+ D+ A+ER + + YHVL G LSP+D GP+D+ I+S
Sbjct: 67 DPCLICRDNDREGSVLMVVEEARDVMAMERMQNYHGKYHVLHGVLSPMDGTGPDDLNIRS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ +I+E+I A +AT EG+ TA Y+ +K +K++R+AYG+ +GS+++Y D+
Sbjct: 127 LLQRLQDTQIQEVIIATNATAEGEATATYLARLIKPAQIKVSRIAYGLSVGSDIEYADEM 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLMRALDGRQEL 198
>gi|94264276|ref|ZP_01288070.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|94270246|ref|ZP_01291688.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|93450881|gb|EAT01896.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|93455321|gb|EAT05528.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
Length = 203
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 125/191 (65%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI ++PG G +SA R LHL+++ LA ++ ++ + +CS C
Sbjct: 8 LERLIVDFGKLPGIGRKSATRLALHLLRRPALEAHGLARSLHELHQLITMCSSCCAFSEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RDAS++ VVE+ DL A+E++ + YH+L G+LSP+D IGP+++ I
Sbjct: 68 DPCEICRNPGRDASLVCVVEEPGDLLAIEKTSSYKGKYHILHGALSPMDGIGPKELKIGL 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDYLD 187
L+ERI+ +++RE++ A S+T+ G+ TA Y++D+L+ V++TRLAYGIPMG ++ Y D
Sbjct: 128 LLERIKREQVREVLIATSSTVPGEATASYLIDQLRQHTTGVRLTRLAYGIPMGMDIKYAD 187
Query: 188 DGTIFEAIRSR 198
+ T+ AI +R
Sbjct: 188 ELTLARAIETR 198
>gi|184154761|ref|YP_001843101.1| recombination protein RecR [Lactobacillus fermentum IFO 3956]
gi|227514028|ref|ZP_03944077.1| recombination protein RecR [Lactobacillus fermentum ATCC 14931]
gi|260663210|ref|ZP_05864102.1| recombination protein RecR [Lactobacillus fermentum 28-3-CHN]
gi|229890154|sp|B2GAD9|RECR_LACF3 RecName: Full=Recombination protein recR
gi|183226105|dbj|BAG26621.1| recombination protein RecR [Lactobacillus fermentum IFO 3956]
gi|227087614|gb|EEI22926.1| recombination protein RecR [Lactobacillus fermentum ATCC 14931]
gi|260552402|gb|EEX25453.1| recombination protein RecR [Lactobacillus fermentum 28-3-CHN]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 125/191 (65%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G +SA R + + + + A+++ + + CS+CGN+
Sbjct: 7 IARLIDSYMKLPGIGEKSATRLAFYTLGMSDADVDNFAKSLRAVKRDLHYCSVCGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVE D+ A+ER K + LYHVL G++SP + GP+DI ++S
Sbjct: 67 DPCPICKDKTRDQSRVLVVERSRDIMAMERMKEYHGLYHVLHGTISPSEGTGPQDINLES 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R+E K+I+E+I A +A+++G+TTA Y+ +K +K+TRLA+G+ G+++DY D+
Sbjct: 127 LLKRLEAHKEIQEVIVATNASLDGETTAQYLAHLIKPAGIKVTRLAHGLSAGADIDYTDE 186
Query: 189 GTIFEAIRSRT 199
T+F A++ RT
Sbjct: 187 VTLFRAVQGRT 197
>gi|271970478|ref|YP_003344674.1| recombination protein RecR [Streptosporangium roseum DSM 43021]
gi|270513653|gb|ACZ91931.1| recombination protein RecR [Streptosporangium roseum DSM 43021]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L +PG GP+SA+R HL+ + + LA A+ + KV C +CGNV
Sbjct: 6 VQNLIDELGMLPGVGPKSAQRIAFHLLAAEPTDVKRLAHALLEVKEKVRFCRVCGNVAAE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD VI VVE+ D+ A+E+++ YHVLGG++SP+D +GP+D+ I+
Sbjct: 66 EECRICRDVRRDPHVICVVEESKDVVAIEKTREFRGRYHVLGGAISPIDGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGQVTELILATDPNLEGEATATYLARLVKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|295694721|ref|YP_003587959.1| recombination protein RecR [Bacillus tusciae DSM 2912]
gi|295410323|gb|ADG04815.1| recombination protein RecR [Bacillus tusciae DSM 2912]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 125/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A+R H+++ ++ + L++A+ + + C IC N+
Sbjct: 8 ISQLIDGFMKLPGIGPKTAQRLAFHVLRMPDEDVLHLSQALVAVKKDLRYCRICCNITDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D+ RD VI VV+D D+ A+ER++ + +YHVL G++SP++ IGPEDI ++
Sbjct: 68 DPCTLCRDELRDHRVICVVQDPRDVAAMERTREYHGVYHVLHGAISPMEGIGPEDIRVKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +ELI A + T+EG+ TA ++ +K + VK+TR+A G+PMG +L+Y D+
Sbjct: 128 LLERMKNDLPKELILATNPTVEGEATAMFLTRLVKPLGVKVTRIARGLPMGGDLEYADEL 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLSQALEGR 196
>gi|172037739|ref|YP_001804240.1| recombination protein RecR [Cyanothece sp. ATCC 51142]
gi|171699193|gb|ACB52174.1| recombination protein [Cyanothece sp. ATCC 51142]
Length = 202
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V LC +C +
Sbjct: 11 LARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGLCKVCFHFSEQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD+ + VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ
Sbjct: 71 PVCDICRNPNRDSQTVCVVADSRDVIALEKTREYRGKYHVLGGVMSPMDGIGPEQLYIQP 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+Y D+
Sbjct: 131 LVRRVTQEGVKEIILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 190 TLARALEGRREL 201
>gi|30018297|ref|NP_829928.1| recombination protein RecR [Bacillus cereus ATCC 14579]
gi|42779103|ref|NP_976350.1| recombination protein RecR [Bacillus cereus ATCC 10987]
gi|49478186|ref|YP_034380.1| recombination protein RecR [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145190|ref|YP_081639.1| recombination protein RecR [Bacillus cereus E33L]
gi|118475798|ref|YP_892949.1| recombination protein RecR [Bacillus thuringiensis str. Al Hakam]
gi|167635028|ref|ZP_02393345.1| recombination protein RecR [Bacillus anthracis str. A0442]
gi|170688899|ref|ZP_02880101.1| recombination protein RecR [Bacillus anthracis str. A0465]
gi|196036401|ref|ZP_03103798.1| recombination protein RecR [Bacillus cereus W]
gi|196041952|ref|ZP_03109239.1| recombination protein RecR [Bacillus cereus NVH0597-99]
gi|196047692|ref|ZP_03114896.1| recombination protein RecR [Bacillus cereus 03BB108]
gi|206972673|ref|ZP_03233613.1| recombination protein RecR [Bacillus cereus AH1134]
gi|206978342|ref|ZP_03239216.1| recombination protein RecR [Bacillus cereus H3081.97]
gi|217957601|ref|YP_002336143.1| recombination protein RecR [Bacillus cereus AH187]
gi|218235723|ref|YP_002364875.1| recombination protein RecR [Bacillus cereus B4264]
gi|218895161|ref|YP_002443572.1| recombination protein RecR [Bacillus cereus G9842]
gi|218901226|ref|YP_002449060.1| recombination protein RecR [Bacillus cereus AH820]
gi|222093795|ref|YP_002527843.1| recombination protein recr [Bacillus cereus Q1]
gi|225862077|ref|YP_002747455.1| recombination protein RecR [Bacillus cereus 03BB102]
gi|228898778|ref|ZP_04063062.1| hypothetical protein bthur0014_140 [Bacillus thuringiensis IBL
4222]
gi|228905821|ref|ZP_04069720.1| hypothetical protein bthur0013_140 [Bacillus thuringiensis IBL 200]
gi|228912763|ref|ZP_04076412.1| hypothetical protein bthur0012_140 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228918975|ref|ZP_04082356.1| hypothetical protein bthur0011_130 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228925278|ref|ZP_04088376.1| hypothetical protein bthur0010_140 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931527|ref|ZP_04094435.1| hypothetical protein bthur0009_220 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228937327|ref|ZP_04099975.1| hypothetical protein bthur0008_140 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228943831|ref|ZP_04106218.1| hypothetical protein bthur0007_140 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228950572|ref|ZP_04112708.1| hypothetical protein bthur0006_140 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228956465|ref|ZP_04118263.1| hypothetical protein bthur0005_130 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228963122|ref|ZP_04124293.1| hypothetical protein bthur0004_150 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228970213|ref|ZP_04130874.1| hypothetical protein bthur0003_130 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976783|ref|ZP_04137197.1| hypothetical protein bthur0002_130 [Bacillus thuringiensis Bt407]
gi|228983280|ref|ZP_04143495.1| hypothetical protein bthur0001_130 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229039929|ref|ZP_04189695.1| hypothetical protein bcere0027_130 [Bacillus cereus AH676]
gi|229067788|ref|ZP_04201107.1| hypothetical protein bcere0025_140 [Bacillus cereus F65185]
gi|229077297|ref|ZP_04209980.1| hypothetical protein bcere0023_230 [Bacillus cereus Rock4-2]
gi|229089157|ref|ZP_04220440.1| hypothetical protein bcere0021_140 [Bacillus cereus Rock3-42]
gi|229107710|ref|ZP_04237348.1| hypothetical protein bcere0018_130 [Bacillus cereus Rock1-15]
gi|229119687|ref|ZP_04248950.1| hypothetical protein bcere0016_140 [Bacillus cereus 95/8201]
gi|229125541|ref|ZP_04254575.1| hypothetical protein bcere0015_130 [Bacillus cereus BDRD-Cer4]
gi|229136869|ref|ZP_04265498.1| hypothetical protein bcere0013_150 [Bacillus cereus BDRD-ST26]
gi|229142830|ref|ZP_04271274.1| hypothetical protein bcere0012_130 [Bacillus cereus BDRD-ST24]
gi|229148433|ref|ZP_04276691.1| hypothetical protein bcere0011_130 [Bacillus cereus m1550]
gi|229153804|ref|ZP_04281936.1| hypothetical protein bcere0010_130 [Bacillus cereus ATCC 4342]
gi|229159199|ref|ZP_04287225.1| hypothetical protein bcere0009_140 [Bacillus cereus R309803]
gi|229176624|ref|ZP_04304030.1| hypothetical protein bcere0005_130 [Bacillus cereus 172560W]
gi|229182419|ref|ZP_04309672.1| hypothetical protein bcere0004_140 [Bacillus cereus BGSC 6E1]
gi|229188309|ref|ZP_04315360.1| hypothetical protein bcere0002_140 [Bacillus cereus ATCC 10876]
gi|229194415|ref|ZP_04321220.1| hypothetical protein bcere0001_130 [Bacillus cereus m1293]
gi|254686613|ref|ZP_05150472.1| recombination protein RecR [Bacillus anthracis str. CNEVA-9066]
gi|254724166|ref|ZP_05185951.1| recombination protein RecR [Bacillus anthracis str. A1055]
gi|254744197|ref|ZP_05201878.1| recombination protein RecR [Bacillus anthracis str. Kruger B]
gi|296500858|ref|YP_003662558.1| recombination protein RecR [Bacillus thuringiensis BMB171]
gi|301051761|ref|YP_003789972.1| recombination protein R [Bacillus anthracis CI]
gi|33301482|sp|Q81JB9|RECR_BACCR RecName: Full=Recombination protein recR
gi|73621457|sp|Q73FI4|RECR_BACC1 RecName: Full=Recombination protein recR
gi|73621458|sp|Q63HE8|RECR_BACCZ RecName: Full=Recombination protein recR
gi|73621461|sp|Q6HPZ0|RECR_BACHK RecName: Full=Recombination protein recR
gi|166221922|sp|A0R899|RECR_BACAH RecName: Full=Recombination protein recR
gi|226737886|sp|B7JJD6|RECR_BACC0 RecName: Full=Recombination protein recR
gi|226738994|sp|B7IS39|RECR_BACC2 RecName: Full=Recombination protein recR
gi|226738995|sp|B7HIJ3|RECR_BACC4 RecName: Full=Recombination protein recR
gi|226738996|sp|B7HPT6|RECR_BACC7 RecName: Full=Recombination protein recR
gi|254790749|sp|C1ES27|RECR_BACC3 RecName: Full=Recombination protein recR
gi|254790750|sp|B9IYI9|RECR_BACCQ RecName: Full=Recombination protein recR
gi|29893837|gb|AAP07129.1| Recombination protein recR [Bacillus cereus ATCC 14579]
gi|42735018|gb|AAS38958.1| recombination protein RecR [Bacillus cereus ATCC 10987]
gi|49329742|gb|AAT60388.1| recombination protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51978659|gb|AAU20209.1| recombination protein [Bacillus cereus E33L]
gi|118415023|gb|ABK83442.1| DNA replication and repair protein RecR [Bacillus thuringiensis
str. Al Hakam]
gi|167529502|gb|EDR92252.1| recombination protein RecR [Bacillus anthracis str. A0442]
gi|170667123|gb|EDT17884.1| recombination protein RecR [Bacillus anthracis str. A0465]
gi|195991031|gb|EDX55002.1| recombination protein RecR [Bacillus cereus W]
gi|196021477|gb|EDX60180.1| recombination protein RecR [Bacillus cereus 03BB108]
gi|196027207|gb|EDX65827.1| recombination protein RecR [Bacillus cereus NVH0597-99]
gi|206732393|gb|EDZ49575.1| recombination protein RecR [Bacillus cereus AH1134]
gi|206743434|gb|EDZ54867.1| recombination protein RecR [Bacillus cereus H3081.97]
gi|217065707|gb|ACJ79957.1| recombination protein RecR [Bacillus cereus AH187]
gi|218163680|gb|ACK63672.1| recombination protein RecR [Bacillus cereus B4264]
gi|218536247|gb|ACK88645.1| recombination protein RecR [Bacillus cereus AH820]
gi|218543855|gb|ACK96249.1| recombination protein RecR [Bacillus cereus G9842]
gi|221237841|gb|ACM10551.1| recombination protein [Bacillus cereus Q1]
gi|225788575|gb|ACO28792.1| recombination protein RecR [Bacillus cereus 03BB102]
gi|228589071|gb|EEK47084.1| hypothetical protein bcere0001_130 [Bacillus cereus m1293]
gi|228595177|gb|EEK52945.1| hypothetical protein bcere0002_140 [Bacillus cereus ATCC 10876]
gi|228601065|gb|EEK58632.1| hypothetical protein bcere0004_140 [Bacillus cereus BGSC 6E1]
gi|228606854|gb|EEK64269.1| hypothetical protein bcere0005_130 [Bacillus cereus 172560W]
gi|228624280|gb|EEK81080.1| hypothetical protein bcere0009_140 [Bacillus cereus R309803]
gi|228629673|gb|EEK86368.1| hypothetical protein bcere0010_130 [Bacillus cereus ATCC 4342]
gi|228635042|gb|EEK91613.1| hypothetical protein bcere0011_130 [Bacillus cereus m1550]
gi|228640644|gb|EEK97030.1| hypothetical protein bcere0012_130 [Bacillus cereus BDRD-ST24]
gi|228646604|gb|EEL02809.1| hypothetical protein bcere0013_150 [Bacillus cereus BDRD-ST26]
gi|228657925|gb|EEL13729.1| hypothetical protein bcere0015_130 [Bacillus cereus BDRD-Cer4]
gi|228663778|gb|EEL19355.1| hypothetical protein bcere0016_140 [Bacillus cereus 95/8201]
gi|228675750|gb|EEL30956.1| hypothetical protein bcere0018_130 [Bacillus cereus Rock1-15]
gi|228694180|gb|EEL47860.1| hypothetical protein bcere0021_140 [Bacillus cereus Rock3-42]
gi|228706020|gb|EEL58325.1| hypothetical protein bcere0023_230 [Bacillus cereus Rock4-2]
gi|228715341|gb|EEL67198.1| hypothetical protein bcere0025_140 [Bacillus cereus F65185]
gi|228727419|gb|EEL78610.1| hypothetical protein bcere0027_130 [Bacillus cereus AH676]
gi|228776460|gb|EEM24811.1| hypothetical protein bthur0001_130 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228782945|gb|EEM31109.1| hypothetical protein bthur0002_130 [Bacillus thuringiensis Bt407]
gi|228789514|gb|EEM37432.1| hypothetical protein bthur0003_130 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796578|gb|EEM44015.1| hypothetical protein bthur0004_150 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228803222|gb|EEM50042.1| hypothetical protein bthur0005_130 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228809115|gb|EEM55598.1| hypothetical protein bthur0006_140 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228815855|gb|EEM62089.1| hypothetical protein bthur0007_140 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822352|gb|EEM68332.1| hypothetical protein bthur0008_140 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228828145|gb|EEM73871.1| hypothetical protein bthur0009_220 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834392|gb|EEM79931.1| hypothetical protein bthur0010_140 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228840690|gb|EEM85950.1| hypothetical protein bthur0011_130 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846890|gb|EEM91893.1| hypothetical protein bthur0012_140 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228853829|gb|EEM98587.1| hypothetical protein bthur0013_140 [Bacillus thuringiensis IBL 200]
gi|228860870|gb|EEN05246.1| hypothetical protein bthur0014_140 [Bacillus thuringiensis IBL
4222]
gi|296321910|gb|ADH04838.1| recombination protein RecR [Bacillus thuringiensis BMB171]
gi|300373930|gb|ADK02834.1| recombination protein R [Bacillus cereus biovar anthracis str. CI]
gi|324324014|gb|ADY19274.1| recombination protein RecR [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|326937817|gb|AEA13713.1| recombination protein RecR [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 198
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|193212498|ref|YP_001998451.1| recombination protein RecR [Chlorobaculum parvum NCIB 8327]
gi|229890138|sp|B3QMU8|RECR_CHLP8 RecName: Full=Recombination protein recR
gi|193085975|gb|ACF11251.1| recombination protein RecR [Chlorobaculum parvum NCIB 8327]
Length = 204
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 129/197 (65%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
+E LI+ A++PG G ++A+R T+H+++++ + LA A+ ++ KV CSIC N+
Sbjct: 8 VEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSICQNITDL 67
Query: 69 -TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPC +C RD SVI VVE ++ A E++ LYHVL G +SPLD +GP+DI +
Sbjct: 68 GTDPCLLCTSTGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVGPDDIKV 127
Query: 128 QSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L+ RI +RE++ A++ T+EG+TT+ YI LK + + +TR+A GIP+G+EL+
Sbjct: 128 RELLARISPDSEGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGIPVGAELE 187
Query: 185 YLDDGTIFEAIRSRTVL 201
++D+ T+ A+ R+ +
Sbjct: 188 FIDEATLSRAMDGRSAV 204
>gi|257869780|ref|ZP_05649433.1| recombination protein recR [Enterococcus gallinarum EG2]
gi|257803944|gb|EEV32766.1| recombination protein recR [Enterococcus gallinarum EG2]
Length = 198
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN+
Sbjct: 7 IARLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGNITEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI I
Sbjct: 67 DPCEICSDPSRDKGTILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDINIAP 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIQRLHDDQVKEVIIATNATTEGEATAIYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|220909545|ref|YP_002484856.1| recombination protein RecR [Cyanothece sp. PCC 7425]
gi|254790763|sp|B8HXF0|RECR_CYAP4 RecName: Full=Recombination protein recR
gi|219866156|gb|ACL46495.1| recombination protein RecR [Cyanothece sp. PCC 7425]
Length = 205
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 124/197 (62%), Gaps = 8/197 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG GP++A+R LHL+K+ + + LA+A+ +V LCS+C ++
Sbjct: 7 RPLARLIEQLQRLPGVGPKTAQRLALHLLKRPDSEVQALAQALLEAKQQVGLCSVCFHLS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C +C RD + VV D D+ ALE+++ + YHVLGG +SP++ IGPE + I
Sbjct: 67 AEPVCEVCRAPSRDEGTLCVVADSRDVIALEKTREYHGKYHVLGGLISPMEGIGPEQLHI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYI------MDKLKGIDVKITRLAYGIPMGS 181
Q LI+R+ + E+I AIS +IEG+TT YI + KLKG K+TR+A+G+PMG
Sbjct: 127 QPLIQRVSQTAVEEVIMAISPSIEGETTTLYIAQLLKPLTKLKG--AKVTRIAFGLPMGG 184
Query: 182 ELDYLDDGTIFEAIRSR 198
+L+Y D+ T+ A+ R
Sbjct: 185 DLEYADEVTLARALEGR 201
>gi|152973873|ref|YP_001373390.1| recombination protein RecR [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189029352|sp|A7GJT7|RECR_BACCN RecName: Full=Recombination protein recR
gi|152022625|gb|ABS20395.1| recombination protein RecR [Bacillus cytotoxicus NVH 391-98]
Length = 198
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+++ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICDDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|110637455|ref|YP_677662.1| recombination protein RecR [Cytophaga hutchinsonii ATCC 33406]
gi|122966886|sp|Q11W94|RECR_CYTH3 RecName: Full=Recombination protein recR
gi|110280136|gb|ABG58322.1| recombination protein [Cytophaga hutchinsonii ATCC 33406]
Length = 205
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K +E+ + ++++PG G ++A R LHL+KK+ + LA A+ N + C C +
Sbjct: 5 SKLLEDAVLEISKLPGIGKKTALRLVLHLLKKESKESESLANALLNARENIRYCKKCHTI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ CAIC +RD V+ +VED+ D+ A+E + +YHV+GG +SP++RIGP+ +
Sbjct: 65 SDHELCAICTSNKRDKRVVCIVEDIRDVLAIENTNQYFGVYHVIGGVISPMERIGPDQLN 124
Query: 127 IQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER I +I+E+I +S T+EG TTA +I KLK +KI+ +A GIP G EL+Y
Sbjct: 125 INSLIERVITDTEIKEIILGLSPTMEGDTTAFFITKKLKSYPIKISTIARGIPFGGELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ +I +RT+
Sbjct: 185 MDEVTLGRSIATRTLF 200
>gi|313892542|ref|ZP_07826129.1| recombination protein RecR [Dialister microaerophilus UPII 345-E]
gi|313118939|gb|EFR42144.1| recombination protein RecR [Dialister microaerophilus UPII 345-E]
Length = 196
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + + ++PG G +SA+R ++ + ++ + + + N VC CSIC N+ T+
Sbjct: 5 LEEVAEQFCKLPGIGVKSAKRLAYFMLMRPQKDIDTFLKTIENAKKSVCYCSICCNLATS 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D +R++S++ +VE+ D+ A+E+S N LYHVL G LSPLD IGPE++ I+
Sbjct: 65 DPCSICTDSKRNSSLLCIVENPQDVHAMEQSHEYNGLYHVLHGVLSPLDGIGPENLKIKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ I E+I A EG+ TA+YI D +K +KITR A G+P GS + Y D
Sbjct: 125 LLTRLKDSNINEVIIATDPDTEGEATAYYIADLIKPSGIKITRPARGLPAGSNIGYADSI 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLANAVENR 193
>gi|239916819|ref|YP_002956377.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC
2665]
gi|281414721|ref|ZP_06246463.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC
2665]
gi|289706014|ref|ZP_06502387.1| recombination protein RecR [Micrococcus luteus SK58]
gi|239838026|gb|ACS29823.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC
2665]
gi|289557216|gb|EFD50534.1| recombination protein RecR [Micrococcus luteus SK58]
Length = 199
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 127/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA+A+ + ++V LCS+C NV
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHMLEADREDMLRLADAIRTVKDRVRLCSVCFNVSED 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C++C D++RD S I VVE+ D+ A+ER++A YHVLGG+++P+ IGPE + ++
Sbjct: 66 EVCSLCRDERRDRSQICVVEESQDVMAMERTRAFQGRYHVLGGAINPIAGIGPEQLHVRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + ++E+I A +EG+ TA Y+ L +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLQDEAVQEVILATDPNLEGEATATYLGRLLGATGIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R ++
Sbjct: 186 TLGRAFEGRRLI 197
>gi|313888962|ref|ZP_07822622.1| recombination protein RecR [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845135|gb|EFR32536.1| recombination protein RecR [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 200
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE+LIK L R+PG G ++A+R +++ E + LAEA+ + N CSIC N +
Sbjct: 8 IEDLIKRLNRLPGIGSKTAQRLAYYIIGLDETEVRDLAEALISAKNNTVECSICMNYADS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC ++ RD SVI VVE D+ A+ERS + YHVL G +SPL PED+ I+
Sbjct: 68 DPCEICSNKNRDDSVICVVESPKDVDAMERSLSFRGKYHVLHGVISPLKGKTPEDVTIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+RIE I+E+I A + T++G TA YI + L+ D+ ++R+ YG+P+G +L+Y D+
Sbjct: 128 LIKRIEEGDIKEVIVATNPTVDGDATARYIKNILEDYDIIVSRIGYGLPVGGDLEYYDEI 187
Query: 190 TIFEAIRSRTVL 201
TI A+ +R L
Sbjct: 188 TIQTAMENRRRL 199
>gi|257783927|ref|YP_003179144.1| recombination protein RecR [Atopobium parvulum DSM 20469]
gi|257472434|gb|ACV50553.1| recombination protein RecR [Atopobium parvulum DSM 20469]
Length = 203
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ ++ L+ L R+PG GP+SA+R HL++ + LA+ + + +V C IC N
Sbjct: 9 GRALQRLLDELGRLPGIGPKSAQRIAYHLLEVDSEEARRLAQVILELKQQVHFCPICFNY 68
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T + C IC+D RD S I VV + D+ A+ER+ A + LYHVLGG +SP+D+IGPE +
Sbjct: 69 ATRNECDICLDSSRDRSKICVVSEPKDVSAIERTGAFHGLYHVLGGVISPMDKIGPEQLH 128
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ R+ + E++ A + +EG+TTA Y+ + + V++TRLA G+P+G +L+Y
Sbjct: 129 VRELLSRLADGTVTEVVLATNPDVEGETTATYLSRTINPLGVRVTRLASGLPVGGDLEYA 188
Query: 187 DDGTIFEAIRSR 198
D+ T+ AI +R
Sbjct: 189 DEVTLGRAIEAR 200
>gi|166367420|ref|YP_001659693.1| recombination protein RecR [Microcystis aeruginosa NIES-843]
gi|166089793|dbj|BAG04501.1| recombination protein [Microcystis aeruginosa NIES-843]
Length = 188
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ L ++PG GP+SA+R L+++K+ EQ LA+A+ +V LC +C ++ C
Sbjct: 1 MIEQLQKLPGVGPKSAQRLALYILKRPEQDAIELAQAIVAAKKQVGLCQVCFHLSAEPIC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + R+ I VV D D+ ALE+++ + YHVLGG +SP+D IGP+ + IQSL+
Sbjct: 61 EICRNPNRETGTICVVADSRDVIALEKTREYSGKYHVLGGVISPMDGIGPDQLNIQSLVT 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ KKI+E+I AIS ++EG+TT YI LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 121 RVSQKKIQEVILAISPSVEGETTTLYIGGLLKPF-TKVTRIAFGLPMGGDLEYADEVTLA 179
Query: 193 EAIRSR 198
A+ R
Sbjct: 180 RALEGR 185
>gi|163755946|ref|ZP_02163063.1| recombination protein recR [Kordia algicida OT-1]
gi|161324117|gb|EDP95449.1| recombination protein recR [Kordia algicida OT-1]
Length = 206
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 124/195 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+++ E L A+ ++ ++ C C
Sbjct: 2 EFSSKLLENAVNEISQLPGIGKRTALRLVLHLLRQPESQTLHLTNALQDLRTEIKHCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + R +I VVED+ D+ A+E + LYHVLGG +SPLD IGP
Sbjct: 62 HNISDVEICDICRNVNRQQEIICVVEDIRDVMAIESTAQYKGLYHVLGGKISPLDGIGPH 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+E+++ K++E+IFA+S+T+EG TT YI +++ DVK + +A GI +G EL
Sbjct: 122 NLTINSLVEKVKAGKVKEIIFALSSTMEGDTTNFYIYKQIEKYDVKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSILNR 196
>gi|194336273|ref|YP_002018067.1| recombination protein RecR [Pelodictyon phaeoclathratiforme BU-1]
gi|229470331|sp|B4SGN7|RECR_PELPB RecName: Full=Recombination protein recR
gi|194308750|gb|ACF43450.1| recombination protein RecR [Pelodictyon phaeoclathratiforme BU-1]
Length = 204
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T +E+LI A++PG G ++A+R ++++++ LAEA+ + V CS+C
Sbjct: 2 RYTSAALESLIDEFAKLPGVGRKTAQRLAMYILREPRAEAERLAEALLEAKDNVIRCSVC 61
Query: 64 GNVDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
N+ DPCA+C + RD SVI VVE D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNITDVGVDPCALCTSKARDRSVICVVESPVDMLAFEKTGHYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ R + + +RE++ A++ TIEG+TTA Y+ LK + + +T++A GIP
Sbjct: 122 PDDIKVRELLLRFTMPQSPAVREVVLALNPTIEGETTALYLSKLLKPLGIHVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ RTV+
Sbjct: 182 VGAELEFIDEATLSRAMEGRTVV 204
>gi|288928336|ref|ZP_06422183.1| recombination protein RecR [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331170|gb|EFC69754.1| recombination protein RecR [Prevotella sp. oral taxon 317 str.
F0108]
Length = 204
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 126/199 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + +R+PG G ++A R LHL+K + + + + ++ + + C
Sbjct: 1 MEQQYPSALLEKAVAEFSRLPGIGRKTALRLVLHLLKTRVEDVENFSSSILKVRKDIKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ CAIC + +RDA+ I VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 61 QLCHNISDTETCAICANPRRDAATICVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL+ER+ + E+I A+S+T+EG TT +YI K+ VK + +A GI +G
Sbjct: 121 GPNDIEINSLVERVAKGGVNEVILALSSTMEGDTTNYYISRKIAPYKVKTSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYTDEVTLGRSIINRT 199
>gi|28493676|ref|NP_787837.1| recombination protein RecR [Tropheryma whipplei str. Twist]
gi|73621529|sp|Q83MQ8|RECR_TROWT RecName: Full=Recombination protein recR
gi|28476718|gb|AAO44806.1| recombination protein [Tropheryma whipplei str. Twist]
Length = 198
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI+ L ++PG GP+SA+R T +++ + L+E + ++ +V C +CGN
Sbjct: 6 VQDLIRELGKLPGIGPKSAQRITFFILQNPSFDIDRLSETLQSVRKQVQFCKVCGNFSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD VI VVE+ D+ A+E+++ + LYHVLGG++SP+D +GP+D+ I+
Sbjct: 66 DECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDDLNIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I E++ A +EG+ TA YI + + +++++LA G+P+GS+L+Y D+
Sbjct: 126 LLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLGRALEGR 194
>gi|197116610|ref|YP_002137037.1| recombination protein RecR [Geobacter bemidjiensis Bem]
gi|226726304|sp|B5E9A4|RECR_GEOBB RecName: Full=Recombination protein recR
gi|197085970|gb|ACH37241.1| recombination protein RecR [Geobacter bemidjiensis Bem]
Length = 197
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 127/192 (66%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ L ++PG G +SA+R HL+K + LA+++ + +V LCS+C +
Sbjct: 8 LTRLVGELKKLPGVGEKSAQRLAFHLLKHPSNIEA-LAQSLLQVGERVHLCSVCFAITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC +RD+ I VVE+ DL ALERS+A + YHVL G+LSPL+ + P+D+ I
Sbjct: 67 DPCWIC-SGERDSGTICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKDLRIAE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++RE++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y+D
Sbjct: 126 LMQRLQGGEVREVLIATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPVGSDLEYVDAA 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 186 TVQRAVEGRSEL 197
>gi|237743984|ref|ZP_04574465.1| recombination protein recR [Fusobacterium sp. 7_1]
gi|229433015|gb|EEO43227.1| recombination protein recR [Fusobacterium sp. 7_1]
Length = 197
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKKFAEALLAVKENVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCSICSDNTRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|229027872|ref|ZP_04184029.1| hypothetical protein bcere0028_140 [Bacillus cereus AH1271]
gi|228733448|gb|EEL84273.1| hypothetical protein bcere0028_140 [Bacillus cereus AH1271]
Length = 198
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ +GPEDI I
Sbjct: 67 DPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGVGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|148653525|ref|YP_001280618.1| recombination protein RecR [Psychrobacter sp. PRwf-1]
gi|172048543|sp|A5WG77|RECR_PSYWF RecName: Full=Recombination protein recR
gi|148572609|gb|ABQ94668.1| DNA replication and repair protein RecR [Psychrobacter sp. PRwf-1]
Length = 195
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 122/192 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ +NL+K L +PG G ++A+R LHL+ + LA+A+ +++ C C +
Sbjct: 4 EKFDNLVKQLRVLPGVGQKTAQRMALHLLNGRRGQGSALAQALDIAMHEIIECRQCHSFS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC+D +RD SV+ VVE AD+ A+E++ Y VLGG LSPLD I +D+ I
Sbjct: 64 DDDICPICVDPRRDDSVLCVVETAADVMAIEQAAGYRGRYFVLGGHLSPLDGINADDLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R++ + E+I A S T+EGQTTAH+I + ++ K+TR+A GIPMG EL+YLD
Sbjct: 124 DQLVNRVKTAPVDEIILATSTTVEGQTTAHFIAEAVRRHVGKVTRIAQGIPMGGELEYLD 183
Query: 188 DGTIFEAIRSRT 199
T+ +A+++R+
Sbjct: 184 SMTLSQALQNRS 195
>gi|260584504|ref|ZP_05852251.1| recombination protein RecR [Granulicatella elegans ATCC 700633]
gi|260158022|gb|EEW93091.1| recombination protein RecR [Granulicatella elegans ATCC 700633]
Length = 198
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG G ++A R ++ E+ + A A+ + + +CS+CGN+
Sbjct: 7 IARLMDSYMKLPGIGAKTAARLAFFSMEMPEEEVMNFANALISCKRDLTMCSVCGNITQE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD + I+VVED D+ +LER K LYHVL G LSP++ GP+DI + S
Sbjct: 67 DPCEICQDASRDRTKILVVEDSRDVMSLERMKEYKGLYHVLHGVLSPMEGTGPDDINVAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ + E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIQRLQDPTVEEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEYADEM 186
Query: 190 TIFEAIRSRTVL 201
T+F+AI R L
Sbjct: 187 TLFKAIEGRREL 198
>gi|120436597|ref|YP_862283.1| recombination protein RecR [Gramella forsetii KT0803]
gi|171460856|sp|A0M3M1|RECR_GRAFK RecName: Full=Recombination protein recR
gi|117578747|emb|CAL67216.1| recombination protein RecR [Gramella forsetii KT0803]
Length = 205
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 124/194 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E + ++++PG G R+A R LHL+K+ E+ L++A+ + + LC+ C
Sbjct: 3 FSSKLLEQAVDEMSQLPGIGKRTALRLVLHLLKQPEEQTTQLSKALLELRQNIKLCNNCY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C IC + R + ++ VVED+ D+ A+E + YHVLGG +SP+D IGP
Sbjct: 63 NISDTELCEICANPSRVSEIVCVVEDIRDVMAIENTGQYRGHYHVLGGKISPMDGIGPSQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ LIE+++ KI E+IFA+S+T+EG TT YI +L+G +K + +A GI +G EL+
Sbjct: 123 LTIKPLIEKVQAGKIDEIIFALSSTLEGDTTNFYIFKQLEGTAIKTSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSITNR 196
>gi|307243767|ref|ZP_07525904.1| recombination protein RecR [Peptostreptococcus stomatis DSM 17678]
gi|306492866|gb|EFM64882.1| recombination protein RecR [Peptostreptococcus stomatis DSM 17678]
Length = 199
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI +++PG G ++A+R H++ + + L++A+ ++ N++ CS+C N+ T
Sbjct: 8 IDRLINEFSKLPGIGRKTAQRLAFHVINMDIKDVTGLSKALVDVKNEIKYCSVCCNISDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD S I VVED D+ A+ER+K + YHVL G +SP+D IGP+ + I+
Sbjct: 68 EVCPICANSHRDPSTICVVEDPRDVAAMERTKDYSGRYHVLNGVISPMDGIGPDMLNIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L+Y DD
Sbjct: 128 LISRLGDGSVKEIIMATNPTIEGEATAMYISRLVKPMGIKVTRIAHGLPVGGDLEYADDV 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TISKALEGR 196
>gi|72160448|ref|YP_288105.1| recombination protein RecR [Thermobifida fusca YX]
gi|123747302|sp|Q47TY2|RECR_THEFY RecName: Full=Recombination protein recR
gi|71914180|gb|AAZ54082.1| DNA replication and repair protein RecR [Thermobifida fusca YX]
Length = 199
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R HL+ + + L A+ + +V C++CGN+
Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFHLLAAETADVHRLVNALVAVKERVRFCAVCGNIAEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ ++
Sbjct: 66 TQCRICRDPRRDDTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRVKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +EG+ TA Y+ LK + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LMARLSEGRVTEVILATDPNLEGEATATYLARLLKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFEGRRAL 197
>gi|303239745|ref|ZP_07326269.1| recombination protein RecR [Acetivibrio cellulolyticus CD2]
gi|302592682|gb|EFL62406.1| recombination protein RecR [Acetivibrio cellulolyticus CD2]
Length = 199
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++PG G ++A+R H++ + + LA ++++ K CS+CGN+ +
Sbjct: 8 VARLIEEFEKLPGIGHKTAQRLAFHVLNMPIEKVERLASSISDAKLKTKYCSVCGNLTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C++C RD SVI VVED D+ A+ER K LYHVL G++SP++ IGPEDI I+
Sbjct: 68 EICSLCSSNTRDESVICVVEDARDVAAMERIKEFKGLYHVLHGAISPMEGIGPEDIKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ RI+ K I+E+I A + IEG+ TA YI LK I +K TR+A+GIP+G +L+Y D+
Sbjct: 128 LLLRIQDKDIKEVIIATNPNIEGEATAMYISKLLKPIGIKATRIAHGIPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLAKALEGR 196
>gi|22299747|ref|NP_682994.1| recombination protein RecR [Thermosynechococcus elongatus BP-1]
gi|34222856|sp|Q8DGV8|RECR_THEEB RecName: Full=Recombination protein recR
gi|22295931|dbj|BAC09756.1| recombination protein [Thermosynechococcus elongatus BP-1]
Length = 202
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG GP++A+R LHL+K+ E + LA+A+ +V LCS+C ++
Sbjct: 7 RPLARLIEQLQRLPGIGPKTAQRLALHLIKRPEADIQALAQALLEAKQQVGLCSVCFHLS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC QRD I VV D D+ A+E+++ + YHVLGG +SPL+ I PE + I
Sbjct: 67 AEPVCEICASPQRDNHTICVVADSRDVIAIEKTREYHGKYHVLGGLISPLEGITPEHLHI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q LI+R ++ E+I AI+ +IEG+TT Y+ L+ VK+TR+A+G+P+G +LDY D
Sbjct: 127 QPLIQRASQPQVEEVILAINPSIEGETTTLYVGQLLRPF-VKVTRIAFGLPVGGDLDYAD 185
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 186 EMTLARALAGR 196
>gi|134297923|ref|YP_001111419.1| recombination protein RecR [Desulfotomaculum reducens MI-1]
gi|172044204|sp|A4J0J1|RECR_DESRM RecName: Full=Recombination protein recR
gi|134050623|gb|ABO48594.1| DNA replication and repair protein RecR [Desulfotomaculum reducens
MI-1]
Length = 200
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 126/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ A++PG GP++A+R H++ +L LA+A+ + + CS+C N+
Sbjct: 8 VARLVDEFAKLPGIGPKTAQRLAFHVLNSPPELAQGLAKALVEVRQSIKRCSLCCNLTDE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D R+++++ VVE+ D+ A+E+++ YHVL G++SP++ I PED+ I+
Sbjct: 68 DPCSICQDTTRNSNLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPEDLTIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ I+E+I A ++ +EG+TTA Y+ LK + VK+TR+A+GIP+GS+L+Y D
Sbjct: 128 LLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLEYADAM 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLNKALEGR 196
>gi|119961171|ref|YP_946469.1| recombination protein RecR [Arthrobacter aurescens TC1]
gi|171704623|sp|A1R2K7|RECR_ARTAT RecName: Full=Recombination protein recR
gi|119948030|gb|ABM06941.1| recombination protein RecR [Arthrobacter aurescens TC1]
Length = 199
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + L A+ + +V C++C NV
Sbjct: 6 VQELIDELGRLPGVGPKSAQRLAFHILEADPEDMKRLVTAITTVKERVKFCTVCFNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC DQ+RD SVI VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE + I+
Sbjct: 66 ETCNICRDQRRDPSVICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLNDGAIQEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|34762299|ref|ZP_00143303.1| Recombination protein recR [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256027402|ref|ZP_05441236.1| recombination protein recR [Fusobacterium sp. D11]
gi|260497949|ref|ZP_05816066.1| recombination protein RecR [Fusobacterium sp. 3_1_33]
gi|289765366|ref|ZP_06524744.1| recombination protein recR [Fusobacterium sp. D11]
gi|27888021|gb|EAA25084.1| Recombination protein recR [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|260196510|gb|EEW94040.1| recombination protein RecR [Fusobacterium sp. 3_1_33]
gi|289716921|gb|EFD80933.1| recombination protein recR [Fusobacterium sp. D11]
Length = 197
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCSICSDNTRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|259048075|ref|ZP_05738476.1| recombination protein RecR [Granulicatella adiacens ATCC 49175]
gi|259035136|gb|EEW36391.1| recombination protein RecR [Granulicatella adiacens ATCC 49175]
Length = 198
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG G ++A R + +E+ + A ++ + + +CS+CGNV
Sbjct: 7 IARLMDSFMKLPGIGAKTAARLAFFCMDMREEDVLNFANSLISCKRDLRMCSVCGNVTQE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD + I+VVED D+ ++ER K LYHVL G LSP++ GP+DI I S
Sbjct: 67 DPCEICADTTRDRTKILVVEDARDVMSMERMKEYKGLYHVLHGVLSPMEGTGPDDINITS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R++ +I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LITRLQDPEIQEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEYADEM 186
Query: 190 TIFEAIRSRTVL 201
T+F AI R L
Sbjct: 187 TLFRAIEGRREL 198
>gi|229816111|ref|ZP_04446429.1| hypothetical protein COLINT_03164 [Collinsella intestinalis DSM
13280]
gi|229808311|gb|EEP44095.1| hypothetical protein COLINT_03164 [Collinsella intestinalis DSM
13280]
Length = 198
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 123/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L R+PG GP+SA+R HL++ + LA+A+ + ++V CS C N
Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYHLLEADAEEARRLADAILMVKSEVHFCSRCFNYA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D CAIC D RD I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + +
Sbjct: 65 TGDECAICEDSSRDRGRICVVGEPRDVSAIERTGSYRGLYHVLGGVISPMDKIGPEQLHV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + I E+I A + IEG+TTA Y+ +K + + +TRLA G+P+G +L+Y D
Sbjct: 125 RELLARLGTEDIEEVIIATNPNIEGETTASYLARTIKPLGITVTRLASGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI +R L
Sbjct: 185 ELTLGRAIEARRAL 198
>gi|221632238|ref|YP_002521459.1| recombination protein RecR [Thermomicrobium roseum DSM 5159]
gi|221157067|gb|ACM06194.1| recombination protein RecR [Thermomicrobium roseum DSM 5159]
Length = 201
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + + I LI+ A++PG GP++A R HL++ + LA+A+ + +V LC
Sbjct: 1 MRARGPAEPIARLIEEFAKLPGIGPKTASRLAYHLLRCSREDALALAQAIIEVKERVQLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N+ DPC IC D RD I VVED D+ ALER+ A + +YHVL G +SP+D I
Sbjct: 61 SRCFNLTDVDPCPICADPSRDQRTICVVEDPLDVLALERTGAYHGVYHVLHGVISPVDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I+ L+ R++ ++ E+I A++ IEG TA YI +L + V +TR A G+P+G
Sbjct: 121 GPERLRIRELVHRVQQEQPNEVILALNPNIEGDATAMYIARQLIPLGVTVTRPASGLPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ A+ R L
Sbjct: 181 GDLEYADEITLGRALAGRRAL 201
>gi|164686924|ref|ZP_02210952.1| hypothetical protein CLOBAR_00524 [Clostridium bartlettii DSM
16795]
gi|164604027|gb|EDQ97492.1| hypothetical protein CLOBAR_00524 [Clostridium bartlettii DSM
16795]
Length = 199
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSIC N+
Sbjct: 8 ISRLIEEFSKLPGIGKKTAQRLAFHVINMNNNDVEALSKAILDAKKEIKYCSICCNITDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC++C + RD+SVI VVED D+ A+E+ + YHVL G +SP+D IGP+ I I+
Sbjct: 68 DPCSMCSNPNRDSSVICVVEDPRDVAAMEKIREFKGQYHVLNGVISPMDGIGPDMINIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ + ++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIQRLGNQDVKEIIMATNPTIEGEATAMYIARLIKPMGIKVTRIAHGLPIGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TISKALEGR 196
>gi|229170874|ref|ZP_04298479.1| hypothetical protein bcere0006_140 [Bacillus cereus MM3]
gi|228612609|gb|EEK69826.1| hypothetical protein bcere0006_140 [Bacillus cereus MM3]
Length = 198
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S++ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICNDSHRDQSIVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|332971117|gb|EGK10084.1| recombination protein R [Psychrobacter sp. 1501(2011)]
Length = 195
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 120/192 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ +NL+K L +PG G ++A+R LHL+ K LA+A+ + + C C +
Sbjct: 4 EKFDNLVKQLRVLPGVGQKTAQRMALHLLNGKRPQGSALAQALDIAMHDIIECRQCHSFS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC+D +RD V+ VVE AD+ A+E+S Y VLGG LSPLD I +D+ I
Sbjct: 64 DDEVCPICLDPRRDDRVLCVVETAADVMAIEQSAGYRGRYFVLGGHLSPLDGINADDLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R++ + ELI A S T+EGQTTAH+I + ++ K+TR+A GIPMG EL+YLD
Sbjct: 124 DQLVSRVKASPVEELILATSTTVEGQTTAHFISEAVRRHVGKVTRIAQGIPMGGELEYLD 183
Query: 188 DGTIFEAIRSRT 199
T+ +A+++R+
Sbjct: 184 SMTLSQALQNRS 195
>gi|329121192|ref|ZP_08249820.1| recombination protein R [Dialister micraerophilus DSM 19965]
gi|327470274|gb|EGF15735.1| recombination protein R [Dialister micraerophilus DSM 19965]
Length = 196
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + + ++PG G +SA+R ++ + ++ + + + N VC CSIC N+ T+
Sbjct: 5 LEEVAEQFRKLPGIGVKSAKRLAYFMLMRPQKDIDTFLKTIENAKKSVCYCSICCNLATS 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D +R++S++ +VE+ D+ A+E+S N LYHVL G LSPLD IGPE++ I+
Sbjct: 65 DPCSICTDSKRNSSLLCIVENPQDVHAMEQSHEYNGLYHVLHGVLSPLDGIGPENLKIKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ I E+I A EG+ TA+YI D +K +KITR A G+P GS + Y D
Sbjct: 125 LLTRLKDSNINEVIIATDPDTEGEATAYYIADLIKPSGIKITRPARGLPAGSNIGYADSI 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLANAVENR 193
>gi|284036517|ref|YP_003386447.1| recombination protein RecR [Spirosoma linguale DSM 74]
gi|283815810|gb|ADB37648.1| recombination protein RecR [Spirosoma linguale DSM 74]
Length = 203
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K IE+ + ++++PG G ++A R LHL+K+ E+ LA+++ + V C C N+
Sbjct: 6 KLIEDAVNEVSKLPGIGKKTALRLVLHLLKRDEEQTETLAQSLTAMRTNVKYCRKCHNLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +RD S+I VVED D+ A+E + LYHVLGG +SP++ IGP D+ I
Sbjct: 66 DNEVCTICASNKRDQSLICVVEDTRDVLAIENTAQYRGLYHVLGGIISPVEGIGPSDLQI 125
Query: 128 QSLIERIE---VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
SL+ R+ +++RE+I AIS T+EG TTA Y+ KLK ++KI+ +A G+P+G +L+
Sbjct: 126 DSLMNRLRDAGSEQVREIILAISPTMEGDTTAFYLQKKLKPFNLKISTIARGVPIGGDLE 185
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I SR
Sbjct: 186 YADEVTLGRSILSR 199
>gi|139438750|ref|ZP_01772234.1| Hypothetical protein COLAER_01237 [Collinsella aerofaciens ATCC
25986]
gi|133775830|gb|EBA39650.1| Hypothetical protein COLAER_01237 [Collinsella aerofaciens ATCC
25986]
Length = 198
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L+ L R+PG GP+SA+R +L++ + LAEA+ + +V CS C N T
Sbjct: 7 LQKLLDELGRLPGIGPKSAQRIAYYLLEADAEEARRLAEAILEVKQEVHFCSRCFNYATA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D RD + I VV + D+ A+ER+ + + LYHVLGG +SP+D+IGPE + I+
Sbjct: 67 DECSICQDPMRDTTRICVVGEPRDVQAIERTGSYHGLYHVLGGVISPMDKIGPEQLHIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + I E+I A + IEG+TTA Y+ +K + V+++RLA G+P+G +L+Y D+
Sbjct: 127 LLARLGHEDIHEVIIATNPNIEGETTASYLARTIKPLGVEVSRLASGLPVGGDLEYADEL 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +R +
Sbjct: 187 TLGRAIEARRAI 198
>gi|296328102|ref|ZP_06870635.1| recombination protein R [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154773|gb|EFG95557.1| recombination protein R [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 197
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 112/191 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKKNVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C IC D RD +I VVE+ D+ LER+ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCHICSDNARDHRIICVVEESKDIMILERTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|291532774|emb|CBL05887.1| recombination protein RecR [Megamonas hypermegale ART12/1]
Length = 198
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 118/186 (63%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ +PG G ++A R H++ + LA+A+ K+ CS C N+ TDPC
Sbjct: 10 LIEHFRTLPGIGSKTAVRLAYHILDMEPAQAKALAQAIIEAKEKIGFCSCCFNLSDTDPC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
AIC RD S+I VVE D+ A+ER + +YHVL G+LSP++ +GPEDI I+ L+
Sbjct: 70 AICTSSNRDHSIICVVEHPKDVVAMERMRDYKGVYHVLHGALSPIEGVGPEDIHIKELLN 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ K++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L+Y D+ T+
Sbjct: 130 RLYDDKVKEVIMATNPNIEGEATAMYIAKLLKPLGIKVTRIAHGLPVGGDLEYADEVTLA 189
Query: 193 EAIRSR 198
+AI +R
Sbjct: 190 KAIENR 195
>gi|160900333|ref|YP_001565915.1| recombination protein RecR [Delftia acidovorans SPH-1]
gi|160365917|gb|ABX37530.1| recombination protein RecR [Delftia acidovorans SPH-1]
Length = 196
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 117/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ V C C
Sbjct: 5 QSLDGLIEALRRLPGVGIKSAQRMAFHLLQRDQDGARQLARALTTAVESVTHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D+ RDA+ + VVE AD+ A+ER+ A Y+VL G LSPLD IGP D+ +
Sbjct: 65 EGRICSICQDEGRDAARLCVVEAPADMAAMERTGAYQGYYYVLMGRLSPLDGIGPRDLNL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ER K++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 SSLLERAGDGKVQEVILATSFTAEGEATAHAISEALKARGIHVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALVDR 195
>gi|53713342|ref|YP_099334.1| recombination protein RecR [Bacteroides fragilis YCH46]
gi|60681587|ref|YP_211731.1| recombination protein RecR [Bacteroides fragilis NCTC 9343]
gi|253565320|ref|ZP_04842775.1| recombination protein recR [Bacteroides sp. 3_2_5]
gi|255008967|ref|ZP_05281093.1| recombination protein RecR [Bacteroides fragilis 3_1_12]
gi|265763415|ref|ZP_06091983.1| recombination protein RecR [Bacteroides sp. 2_1_16]
gi|73621459|sp|Q5LDK8|RECR_BACFN RecName: Full=Recombination protein recR
gi|73621460|sp|Q64UM9|RECR_BACFR RecName: Full=Recombination protein recR
gi|52216207|dbj|BAD48800.1| recombination protein RecR [Bacteroides fragilis YCH46]
gi|60493021|emb|CAH07801.1| putative RecR-family recombination protein [Bacteroides fragilis
NCTC 9343]
gi|251945599|gb|EES86006.1| recombination protein recR [Bacteroides sp. 3_2_5]
gi|263256023|gb|EEZ27369.1| recombination protein RecR [Bacteroides sp. 2_1_16]
gi|301163145|emb|CBW22694.1| putative RecR-family recombination protein [Bacteroides fragilis
638R]
Length = 205
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ ++ ++ + ++V C
Sbjct: 1 MNQQYPSTLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTSVVEAFGSSIITLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS++ VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDASMVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ LA G+ +G
Sbjct: 121 GPGDLQIESLVRRVAEGGINEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVLARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEITLGRSIVNRTTF 201
>gi|145219840|ref|YP_001130549.1| recombination protein RecR [Prosthecochloris vibrioformis DSM 265]
gi|189029367|sp|A4SEY8|RECR_PROVI RecName: Full=Recombination protein recR
gi|145206004|gb|ABP37047.1| recombination protein RecR [Chlorobium phaeovibrioides DSM 265]
Length = 204
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI A++PG G ++ARR +H++++ LA A+ + + V CSIC
Sbjct: 2 RYTSAAIEALIDAFAKLPGVGRKTARRLAMHVLQQPRLEAERLASALLDAKDLVVRCSIC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC IC Q RD SVI VVE D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDRDADPCRICTGQGRDQSVICVVESPVDVLAFEKTAHYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI I+ L++R++ + ++RE++ A++ T+EG+TT+ Y+ + + + +T++A GIP
Sbjct: 122 PDDINIRELLQRLQPEEGGEVREIVLALNPTVEGETTSLYLSRLIAPLGIMVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ RT
Sbjct: 182 VGAELEFIDEATLSRAMEGRTTF 204
>gi|187935036|ref|YP_001887619.1| recombination protein RecR [Clostridium botulinum B str. Eklund
17B]
gi|229890144|sp|B2TR53|RECR_CLOBB RecName: Full=Recombination protein recR
gi|187723189|gb|ACD24410.1| recombination protein RecR [Clostridium botulinum B str. Eklund
17B]
Length = 198
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++P G ++A+R LH++ + A A+ + CS CGN T
Sbjct: 8 IEKLIEEFAKLPSIGKKTAQRLALHILNLPNDEVREFATALVKARGTIKYCSTCGNFTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C + RD S I VVE D+ +E+ K N LYHVL G++SP+ GP+DI I+
Sbjct: 68 DPCALCSNPNRDKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGPQDIKIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ +E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L+Y D+
Sbjct: 128 LVARMN-EEAKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|188997275|ref|YP_001931526.1| recombination protein RecR [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932342|gb|ACD66972.1| recombination protein RecR [Sulfurihydrogenibium sp. YO3AOP1]
Length = 200
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 128/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I + I+ +I ++R+PG+G ++A+R ++L+K + L +A + +KV LC C
Sbjct: 2 NIVPETIQQVISEISRLPGYGEKTAQRLAVNLLKMPKGEAVDLVRHLALMLDKVHLCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + C +C D+ RD SVI VVE+ D + +E + + LYHVLGG LSPL+ IGPE
Sbjct: 62 GIFTEKEICDVCSDESRDRSVICVVEESFDAFMIENTGKYSGLYHVLGGRLSPLEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+SLI+RI+ ++E+IFA + T+EG+ TA+YI + +K + I+RLAYG+P G L
Sbjct: 122 KLNIKSLIDRIKKLNVKEIIFATNPTVEGEATANYIHNLIKNYPITISRLAYGLPFGGVL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ DD T+ +A+ ++ +L
Sbjct: 182 ENADDFTLAKALENKQIL 199
>gi|182418718|ref|ZP_02949991.1| recombination protein RecR [Clostridium butyricum 5521]
gi|237669751|ref|ZP_04529728.1| recombination protein RecR [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377412|gb|EDT74968.1| recombination protein RecR [Clostridium butyricum 5521]
gi|237654825|gb|EEP52388.1| recombination protein RecR [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 198
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++P G ++A+R TLH++ E + A A+ + CSICGN +
Sbjct: 8 IEKLIEEFAKLPSIGKKTAQRLTLHVLNLPEDEVREFANALVKARGTIKYCSICGNFTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC++C + RD +I VVE D+ +E+ K N +YHVL G++SP+ GP+DI I+
Sbjct: 68 DPCSLCSNPNRDKGMICVVEQPKDIMTMEKVKEYNGVYHVLHGNISPMQGRGPQDIRIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L+Y D+
Sbjct: 128 LVARMSA-DVKEVILATNPNIEGEATAMYISKVLKPLDVKVTRIAAGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|33861653|ref|NP_893214.1| RecR protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|73621508|sp|Q7V0Z7|RECR_PROMP RecName: Full=Recombination protein recR
gi|33634230|emb|CAE19556.1| RecR protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 199
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N+
Sbjct: 6 KPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESSIRDFSKALLEAHSNVGHCKKCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ + C IC + +R+ +I VV + DL ALERS+ YHV+GG +SP+D I PE + I
Sbjct: 66 SEEECEICRNTERNQKIICVVAETKDLLALERSREFKGTYHVIGGLISPMDSISPELLEI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ I E+I A++ ++EG TT+ YI KL K+TR+AYG+PMGSEL+Y+D
Sbjct: 126 RSLVERVSKSDIDEIILALTPSVEGDTTSLYI-GKLLTPFTKVTRIAYGLPMGSELEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLARALEGRTNL 198
>gi|313146708|ref|ZP_07808901.1| recombination protein recR [Bacteroides fragilis 3_1_12]
gi|313135475|gb|EFR52835.1| recombination protein recR [Bacteroides fragilis 3_1_12]
Length = 207
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ ++ ++ + ++V C
Sbjct: 3 MNQQYPSTLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTSVVEAFGSSIITLKHEVKYC 62
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS++ VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 63 KVCHNISDTETCQICANPQRDASMVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 122
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ LA G+ +G
Sbjct: 123 GPGDLQIESLVRRVAEGGINEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVLARGVSIG 182
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 183 DELEYTDEITLGRSIVNRTTF 203
>gi|86133950|ref|ZP_01052532.1| recombination protein RecR [Polaribacter sp. MED152]
gi|85820813|gb|EAQ41960.1| recombination protein RecR [Polaribacter sp. MED152]
Length = 205
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 127/194 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++R+PG G R+A R LHL+K+ ++ L+EA+ ++ N V C C
Sbjct: 3 FSSKILENAVNEVSRLPGIGKRTALRLVLHLLKQPKENTSYLSEALLHLRNDVKSCEKCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T C IC + +R+ ++ VVED+ D+ A+E + LYHVLGG +SP++ IGP++
Sbjct: 63 NISDTVLCDICNNPKRNEEIVCVVEDIRDVMAIESTSQFKGLYHVLGGKISPIEGIGPQN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ ++E I+ELIFA+S+T+EG TT YI +++ ++ + +A GI +G EL+
Sbjct: 123 LQIESLVNKVEKGIIKELIFALSSTMEGDTTNFYIYKQIEKYNITTSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSIVNR 196
>gi|229015427|ref|ZP_04172430.1| hypothetical protein bcere0030_250 [Bacillus cereus AH1273]
gi|229021632|ref|ZP_04178220.1| hypothetical protein bcere0029_140 [Bacillus cereus AH1272]
gi|229074085|ref|ZP_04207134.1| hypothetical protein bcere0024_140 [Bacillus cereus Rock4-18]
gi|229094745|ref|ZP_04225753.1| hypothetical protein bcere0020_140 [Bacillus cereus Rock3-29]
gi|229100811|ref|ZP_04231629.1| hypothetical protein bcere0019_230 [Bacillus cereus Rock3-28]
gi|229113699|ref|ZP_04243136.1| hypothetical protein bcere0017_140 [Bacillus cereus Rock1-3]
gi|228669765|gb|EEL25170.1| hypothetical protein bcere0017_140 [Bacillus cereus Rock1-3]
gi|228682618|gb|EEL36677.1| hypothetical protein bcere0019_230 [Bacillus cereus Rock3-28]
gi|228688683|gb|EEL42553.1| hypothetical protein bcere0020_140 [Bacillus cereus Rock3-29]
gi|228709048|gb|EEL61172.1| hypothetical protein bcere0024_140 [Bacillus cereus Rock4-18]
gi|228739678|gb|EEL90086.1| hypothetical protein bcere0029_140 [Bacillus cereus AH1272]
gi|228745869|gb|EEL95868.1| hypothetical protein bcere0030_250 [Bacillus cereus AH1273]
Length = 198
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD +V+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICDDSHRDQTVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|30260215|ref|NP_842592.1| recombination protein RecR [Bacillus anthracis str. Ames]
gi|47525276|ref|YP_016625.1| recombination protein RecR [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183059|ref|YP_026311.1| recombination protein RecR [Bacillus anthracis str. Sterne]
gi|65317487|ref|ZP_00390446.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Bacillus anthracis str. A2012]
gi|165873224|ref|ZP_02217835.1| recombination protein RecR [Bacillus anthracis str. A0488]
gi|167642054|ref|ZP_02400281.1| recombination protein RecR [Bacillus anthracis str. A0193]
gi|170707503|ref|ZP_02897956.1| recombination protein RecR [Bacillus anthracis str. A0389]
gi|177655675|ref|ZP_02937000.1| recombination protein RecR [Bacillus anthracis str. A0174]
gi|190569334|ref|ZP_03022226.1| recombination protein RecR [Bacillus anthracis Tsiankovskii-I]
gi|227812698|ref|YP_002812707.1| recombination protein RecR [Bacillus anthracis str. CDC 684]
gi|229603389|ref|YP_002864676.1| recombination protein RecR [Bacillus anthracis str. A0248]
gi|254736999|ref|ZP_05194704.1| recombination protein RecR [Bacillus anthracis str. Western North
America USA6153]
gi|254751188|ref|ZP_05203227.1| recombination protein RecR [Bacillus anthracis str. Vollum]
gi|254761658|ref|ZP_05213676.1| recombination protein RecR [Bacillus anthracis str. Australia 94]
gi|33301485|sp|Q81W16|RECR_BACAN RecName: Full=Recombination protein recR
gi|254790747|sp|C3P9H0|RECR_BACAA RecName: Full=Recombination protein recR
gi|254790748|sp|C3LIZ7|RECR_BACAC RecName: Full=Recombination protein recR
gi|30253536|gb|AAP24078.1| recombination protein RecR [Bacillus anthracis str. Ames]
gi|47500424|gb|AAT29100.1| recombination protein RecR [Bacillus anthracis str. 'Ames
Ancestor']
gi|49176986|gb|AAT52362.1| recombination protein RecR [Bacillus anthracis str. Sterne]
gi|164711022|gb|EDR16588.1| recombination protein RecR [Bacillus anthracis str. A0488]
gi|167509988|gb|EDR85407.1| recombination protein RecR [Bacillus anthracis str. A0193]
gi|170127499|gb|EDS96373.1| recombination protein RecR [Bacillus anthracis str. A0389]
gi|172080015|gb|EDT65115.1| recombination protein RecR [Bacillus anthracis str. A0174]
gi|190559556|gb|EDV13549.1| recombination protein RecR [Bacillus anthracis Tsiankovskii-I]
gi|227003148|gb|ACP12891.1| recombination protein RecR [Bacillus anthracis str. CDC 684]
gi|229267797|gb|ACQ49434.1| recombination protein RecR [Bacillus anthracis str. A0248]
Length = 198
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP+ IGPEDI I
Sbjct: 67 DPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|29831100|ref|NP_825734.1| recombination protein RecR [Streptomyces avermitilis MA-4680]
gi|297201258|ref|ZP_06918655.1| recombination protein RecR [Streptomyces sviceus ATCC 29083]
gi|73621518|sp|Q82EQ7|RECR_STRAW RecName: Full=Recombination protein recR
gi|29608214|dbj|BAC72269.1| putative recombination and repair protein [Streptomyces avermitilis
MA-4680]
gi|197712880|gb|EDY56914.1| recombination protein RecR [Streptomyces sviceus ATCC 29083]
Length = 199
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA+ + + KV C+ CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQCLMEVKAKVRFCATCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 66 ELCNICRDPRRDLSVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 186 TLGRAFEGRRLL 197
>gi|307544647|ref|YP_003897126.1| recombination protein RecR [Halomonas elongata DSM 2581]
gi|307216671|emb|CBV41941.1| recombination protein RecR [Halomonas elongata DSM 2581]
Length = 201
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ +PG GP++A+R +HL+++ + LAE + +V C C +
Sbjct: 7 VDRLMESFRVLPGVGPKTAQRMAMHLLERDREGGQRLAEVLGVALEQVGYCQRCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C +RD SV+ VVE ADL A+E ++ Y VL G LSPLD IGPEDIG+
Sbjct: 67 TICALCKSDRRDDSVLCVVESPADLLAIEEARGYRGRYFVLHGHLSPLDGIGPEDIGLDQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ + E+I A + T+EG+ TAHYI +L+ VK++RLAYG+PMG EL+Y+D G
Sbjct: 127 LDARVAEDGVEEVILATNPTVEGEATAHYIASQLEPRGVKLSRLAYGVPMGGELEYVDGG 186
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 187 TLSRAFNGR 195
>gi|29346491|ref|NP_809994.1| recombination protein RecR [Bacteroides thetaiotaomicron VPI-5482]
gi|253568105|ref|ZP_04845516.1| recombination protein recR [Bacteroides sp. 1_1_6]
gi|298387732|ref|ZP_06997283.1| recombination protein RecR [Bacteroides sp. 1_1_14]
gi|73621464|sp|Q8A8T6|RECR_BACTN RecName: Full=Recombination protein recR
gi|29338387|gb|AAO76188.1| recombination protein recR [Bacteroides thetaiotaomicron VPI-5482]
gi|251842178|gb|EES70258.1| recombination protein recR [Bacteroides sp. 1_1_6]
gi|298259588|gb|EFI02461.1| recombination protein RecR [Bacteroides sp. 1_1_14]
Length = 205
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 ETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPSDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVSEGGIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVGDELEYADEI 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|118594961|ref|ZP_01552308.1| recombination protein RecR [Methylophilales bacterium HTCC2181]
gi|118440739|gb|EAV47366.1| recombination protein RecR [Methylophilales bacterium HTCC2181]
Length = 198
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++L+ L +PG GP+SA R +L+++ + L+++++N ++ C +C +
Sbjct: 7 LQSLVDALKCLPGVGPKSALRLAYYLLQRNRKGADTLSQSISNALEQLGHCKLCNDFTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC Q+RD I +VE +DL +E++ + +Y VL G LSPLD +GP++I +
Sbjct: 67 EVCKICSSQKRDVHTICIVEMPSDLLMMEQTHSYKGMYFVLMGRLSPLDGVGPKEIHLDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI+ +IRE+I A + T EG TA YI + LKG ++K+TR+A G+PMG E++Y+D G
Sbjct: 127 LIERIKSSEIREIILATNFTAEGNATAQYIKELLKGAEIKMTRIARGLPMGGEIEYIDSG 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLAQAVVERKQL 198
>gi|253698847|ref|YP_003020036.1| recombination protein RecR [Geobacter sp. M21]
gi|259563697|sp|C6E8Y9|RECR_GEOSM RecName: Full=Recombination protein recR
gi|251773697|gb|ACT16278.1| recombination protein RecR [Geobacter sp. M21]
Length = 197
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ L ++PG G +SA R HL+K + LA+++ + +V LCS+C +
Sbjct: 8 LTRLVGELKKLPGVGEKSALRLAFHLLKHPNNIEA-LAQSLLQVGERVHLCSVCFAITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC +RD+ I VVE+ DL ALERS+A YHVL G+LSPL+ + P+D+ I
Sbjct: 67 DPCWIC-SGERDSGTICVVEEPQDLMALERSRAFGGRYHVLQGALSPLNGVTPKDLRIAE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++RE++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y+D
Sbjct: 126 LMQRLQGGEVREVLIATNFTVEGEATALYLTRMIKPLSIKVTRLAHGIPVGSDLEYVDAA 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 186 TVQRAVEGRSEL 197
>gi|311112887|ref|YP_003984109.1| recombination protein R [Rothia dentocariosa ATCC 17931]
gi|310944381|gb|ADP40675.1| recombination protein R [Rothia dentocariosa ATCC 17931]
Length = 379
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R +++ + L A++ + + V C ICGNV T
Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFYILNSDASDMARLTNAISKVKSSVSFCEICGNVSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD +I VVE+ D+ A+ER+++ YHVLGG+++PL +GPE + I+
Sbjct: 66 KQCVICRDDRRDPGLICVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGLGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++I+E+I A+ +EG+ TA Y+ L + ++++RLA G+P+G +L+Y D+
Sbjct: 126 LVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGIRLSRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R V+
Sbjct: 186 TLGRALEGRRVI 197
>gi|258513458|ref|YP_003189680.1| recombination protein RecR [Desulfotomaculum acetoxidans DSM 771]
gi|257777163|gb|ACV61057.1| recombination protein RecR [Desulfotomaculum acetoxidans DSM 771]
Length = 199
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI + +PG GP++A+R +L+ E++ LAEA+ + + CS+C N+
Sbjct: 8 VSRLINEFSLLPGVGPKTAQRIAFYLLNAPEEVAHRLAEAVREARDNIKYCSVCSNLTDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +R ++I +V++ D+ A+E+S+ LYHVL G++SP+D IGPE++ I+
Sbjct: 68 DPCLICSDNKRSKNIICIVQEPRDVIAMEKSRGFKGLYHVLHGAISPMDGIGPENLRIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +K+ ELI A + +EG TA Y+ +K + +K+TR+A+G+P+G+ L+Y D
Sbjct: 128 LLSRLHKEKVGELILATNPNVEGDATAFYLARLIKPLGIKVTRIAHGLPVGACLEYADGV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLTKALEGR 196
>gi|298492185|ref|YP_003722362.1| recombination protein RecR ['Nostoc azollae' 0708]
gi|298234103|gb|ADI65239.1| recombination protein RecR ['Nostoc azollae' 0708]
Length = 189
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ L R+PG GP+SA+R LH++K+ E + LA+A+ + +V LC +C ++ + C
Sbjct: 1 MIEQLQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIDAKKQVGLCQVCYHLSSEPVC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + RD + I VV D D+ ALE+++ YHVLGG +SP+D IGPE + Q+L+
Sbjct: 61 DICRNPNRDNTTICVVADSRDVIALEKTREYKGKYHVLGGVISPMDGIGPEQLTAQALVR 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ ++ +E+I AIS ++EG+TT YI + LK K+TR+A+G+P+G +L+Y D+ T+
Sbjct: 121 RVSQQQPQEVIMAISPSVEGETTTLYIGELLKPF-TKVTRIAFGLPVGGDLEYADEVTLV 179
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 180 RALEGRREL 188
>gi|317123594|ref|YP_004097706.1| DNA replication and repair protein RecR [Intrasporangium calvum DSM
43043]
gi|315587682|gb|ADU46979.1| DNA replication and repair protein RecR [Intrasporangium calvum DSM
43043]
Length = 199
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+ A+R HL++ + L A+ + +V C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKGAQRIAFHLLQADSDDVSRLVTALTEVKARVRFCEVCGNVAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D+ ++
Sbjct: 66 ERCRICADSRRDHTAICVVEEPKDIVAIERTREFRGTYHVLGGAISPIDGIGPDDLRVRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ +++E+I A +EG+ TA Y+ L+ + + +TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLASGEVQEVIIATDPNLEGEATATYLSRLLRDVGLTVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|300744278|ref|ZP_07073297.1| recombination protein RecR [Rothia dentocariosa M567]
gi|300380003|gb|EFJ76567.1| recombination protein RecR [Rothia dentocariosa M567]
Length = 378
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L R+PG GP+SA+R +++ + L A++ + + V C ICGNV T
Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFYILNSDASDMARLTNAISKVKSSVSFCEICGNVSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD +I VVE+ D+ A+ER+++ YHVLGG+++PL +GPE + I+
Sbjct: 66 KQCVICRDDRRDPGLICVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGLGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++I+E+I A+ +EG+ TA Y+ L + ++++RLA G+P+G +L+Y D+
Sbjct: 126 LVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGIRLSRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R V+
Sbjct: 186 TLGRALEGRRVI 197
>gi|237739922|ref|ZP_04570403.1| recombination protein recR [Fusobacterium sp. 2_1_31]
gi|294782990|ref|ZP_06748314.1| recombination protein RecR [Fusobacterium sp. 1_1_41FAA]
gi|229423530|gb|EEO38577.1| recombination protein recR [Fusobacterium sp. 2_1_31]
gi|294479868|gb|EFG27645.1| recombination protein RecR [Fusobacterium sp. 1_1_41FAA]
Length = 197
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 116/191 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + + V CSICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDICNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SLIER+ + I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLIERLGKEDIEEIILATNPNIEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|229823581|ref|ZP_04449650.1| hypothetical protein GCWU000282_00879 [Catonella morbi ATCC 51271]
gi|229787025|gb|EEP23139.1| hypothetical protein GCWU000282_00879 [Catonella morbi ATCC 51271]
Length = 198
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R +++ KE + A+A+ + + C CGN+ +
Sbjct: 7 IAKLINSFTKLPGIGAKTAARLAFYVLDMKESDVTEFAQALIQVKRDLRFCPTCGNITDS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD+ ++VVED D+ ++ER + LYHVL G LSP++ GPED+ I S
Sbjct: 67 ELCVICSDPSRDSKTVLVVEDARDVMSMERMHEYHGLYHVLHGVLSPMEGTGPEDLNIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ +I E+I A +AT EG+ TA Y+ LK +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLRRLQETEIEEVIVATNATAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIEYADEM 186
Query: 190 TIFEAIRSR 198
T+F AI R
Sbjct: 187 TLFRAIEGR 195
>gi|16332099|ref|NP_442827.1| recombination protein RecR [Synechocystis sp. PCC 6803]
gi|3024523|sp|P74533|RECR_SYNY3 RecName: Full=Recombination protein recR
gi|1653728|dbj|BAA18639.1| recombination protein [Synechocystis sp. PCC 6803]
Length = 232
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+P GP++A+R LHL+K+ + + LA+A+ + +V C +C ++
Sbjct: 42 LARLIEQLQRLPSVGPKTAQRLALHLLKRPDAEVENLAQALLDAKKRVGQCQVCFHLSAE 101
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC QRD SVI VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ
Sbjct: 102 PVCDICRHPQRDNSVICVVSDPRDVIALEKTREFRGKYHVLGGVISPMDGIGPEQLTIQP 161
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +I+E+I AIS ++EG+TT Y + KL K+TR+A+G+PMG +L+Y D+
Sbjct: 162 LLHRVSQPEIKEVILAISPSVEGETTTLY-LGKLLQPFTKVTRIAFGLPMGGDLEYADEV 220
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 221 TLARALEGR 229
>gi|227533728|ref|ZP_03963777.1| recombination protein RecR [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227188712|gb|EEI68779.1| recombination protein RecR [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 216
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG G ++A R + + + + A+++ + CSICGN+
Sbjct: 24 ISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGNITDE 83
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ I+S
Sbjct: 84 DPCAICRDKSRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDLNIES 143
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 144 LLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIEYADE 203
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 204 MTLMKAVEGRTEL 216
>gi|119714585|ref|YP_921550.1| recombination protein RecR [Nocardioides sp. JS614]
gi|171704603|sp|A1SDH8|RECR_NOCSJ RecName: Full=Recombination protein recR
gi|119535246|gb|ABL79863.1| DNA replication and repair protein RecR [Nocardioides sp. JS614]
Length = 199
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+ A+R HL++ + LA+ + + KV CSIC NV
Sbjct: 6 VQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICFNVSQD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD SV+ VVE+ D+ A+ER++ YHVLGG++SP+D +GPE + I+
Sbjct: 66 DQCRICRDPRRDPSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I E+I A +EG+ TA Y+ LK +++++TRLA G+P+G +L+Y D+
Sbjct: 126 LMVRLADGTITEVILATDPNLEGEATATYLTRMLKPLELRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFAGR 194
>gi|262200016|ref|YP_003271225.1| recombination protein RecR [Haliangium ochraceum DSM 14365]
gi|262083363|gb|ACY19332.1| recombination protein RecR [Haliangium ochraceum DSM 14365]
Length = 201
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L++ LAR+PG G ++A R HL++ + LA+ + + + LCS+C N+
Sbjct: 5 IKRLVQHLARLPGIGEKTATRLAFHLIRSPASQVKDLAQTLVEVIEQTVLCSVCANITQD 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R+AS I VV + +D+ A++R +HVL G LSPL+ IGPED+ I
Sbjct: 65 DPCVICRDPGREASAICVVSNPSDVVAIDRGGHFRGRFHVLHGVLSPLEGIGPEDLRIDE 124
Query: 130 LIERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
L++R++ +I E+I A SA +EG+ TA Y+ +K ++++++R+A GIP+G EL+
Sbjct: 125 LLKRLQTPAAGEPEIDEIIVATSANVEGEATAMYLARLIKPLNIRVSRIASGIPVGGELE 184
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D TI A+ R+ L
Sbjct: 185 YSDQATIARALAGRSPL 201
>gi|306833024|ref|ZP_07466156.1| recombination protein R [Streptococcus bovis ATCC 700338]
gi|304424923|gb|EFM28057.1| recombination protein R [Streptococcus bovis ATCC 700338]
Length = 198
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCNICTDQTRDHSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|295425169|ref|ZP_06817873.1| recombination protein R [Lactobacillus amylolyticus DSM 11664]
gi|295065145|gb|EFG56049.1| recombination protein R [Lactobacillus amylolyticus DSM 11664]
Length = 199
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI ++PG G ++A R + + EQ + A+++ + + CSICGN+
Sbjct: 7 IAHLIDSYMKLPGIGEKTATRLAFYTLDMPEQDVQEFAKSLTEVKQDLHQCSICGNITEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + +RD + I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCAICSNPERDQTTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDQVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTSL 199
>gi|313680265|ref|YP_004058004.1| DNA replication and repair protein recr [Oceanithermus profundus
DSM 14977]
gi|313152980|gb|ADR36831.1| DNA replication and repair protein RecR [Oceanithermus profundus
DSM 14977]
Length = 197
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 122/186 (65%), Gaps = 3/186 (1%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ LAR+PG GP+SA++ LHL + K + LA+A+ + V +C CGN+ C
Sbjct: 10 LIRALARLPGVGPKSAQKLGLHLAQNKAEAAE-LAQALEEVRRHVGVCERCGNLAEGPLC 68
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+C D RDA VI VVE AD+ A+E+S +YHVLGG+L+PL+ +GPE + ++SL+E
Sbjct: 69 PVCADPARDAGVIAVVETAADVLAIEKSGEYTGVYHVLGGALNPLEGVGPEQLRVESLLE 128
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R + RE+I A S T+EG+ TA Y+ ++L G K++R AYG+P+G L+Y+D+ T+
Sbjct: 129 R--ARSAREVILATSMTVEGEATAAYLSERLAGGPAKLSRPAYGLPVGGTLEYVDEVTLA 186
Query: 193 EAIRSR 198
A+ R
Sbjct: 187 RALAHR 192
>gi|311745661|ref|ZP_07719446.1| recombination protein RecR [Algoriphagus sp. PR1]
gi|126575099|gb|EAZ79449.1| recombination protein RecR [Algoriphagus sp. PR1]
Length = 205
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 3/198 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I K IE+ + ++R+PG G ++A R LHL+K+ E L A+ + +V C IC
Sbjct: 2 NIPSKLIEDAVTEISRLPGIGKKTALRLALHLLKQSEVHTEALTLALTRMREEVQYCKIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C+IC +RD VI VVED+ D+ A+E + LYHVLGG +SP+ IGPE
Sbjct: 62 HNISDDEHCSICKSHRRDHGVICVVEDIRDVLAIENTDQYQGLYHVLGGVISPIQGIGPE 121
Query: 124 DIGIQSLIERIEV---KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
++ I+SLIER+ + ++E+I A+S T+EG TT+ Y+ +L +K++ +A GIP+G
Sbjct: 122 ELTIESLIERVSTDSEEPVKEVIMALSGTMEGDTTSFYLAKRLHEKGIKVSTIARGIPVG 181
Query: 181 SELDYLDDGTIFEAIRSR 198
EL+Y D+ T+ +I +R
Sbjct: 182 GELEYTDEITLGRSIMTR 199
>gi|210634535|ref|ZP_03298152.1| hypothetical protein COLSTE_02074 [Collinsella stercoris DSM 13279]
gi|210158787|gb|EEA89758.1| hypothetical protein COLSTE_02074 [Collinsella stercoris DSM 13279]
Length = 198
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L R+PG GP+SA+R +L++ + LA+A+ + N+V CS C N
Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYYLLEADAEEARRLADAILMVKNEVHFCSRCFNYA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D CAIC D RD + I VV + D+ A+ER+ + + LYHVLGG +SP+D+IGP+ + +
Sbjct: 65 TGDECAICEDMSRDRNRICVVGEPRDVTAIERTGSYHGLYHVLGGVISPMDKIGPDQLHV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + I E+I A + IEG+TTA Y+ +K + + +TRLA G+P+G +L+Y D
Sbjct: 125 RELLARLGAEDIEEVIIATNPNIEGETTASYLARTIKPLGITVTRLASGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI +R L
Sbjct: 185 ELTLGRAIEARRAL 198
>gi|227431247|ref|ZP_03913301.1| recombination protein RecR [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227353009|gb|EEJ43181.1| recombination protein RecR [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 213
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R T + + E+ + ++A+ + + CSICGN+ T
Sbjct: 19 IAKLIDSYTKLPGIGPKTATRLTFYTLGMNEEDVQDFSKALISAKTDLTFCSICGNITAT 78
Query: 70 D--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D PC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPEDI +
Sbjct: 79 DTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPEDINL 138
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ E ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS++DY
Sbjct: 139 PSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSDIDYA 198
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A++ RT L
Sbjct: 199 DELTLIKAVQGRTKL 213
>gi|290968133|ref|ZP_06559678.1| recombination protein RecR [Megasphaera genomosp. type_1 str. 28L]
gi|290781808|gb|EFD94391.1| recombination protein RecR [Megasphaera genomosp. type_1 str. 28L]
Length = 196
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L + R+PG G ++AR+ ++V++ ++ + A+ K+C CS C N+ +
Sbjct: 5 LDRLTEQFRRLPGIGIKTARKLAYYMVQEPQEKVNEFIHALQEAKQKMCFCSQCFNLSSQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D++RD S+I VVE D+ A+ERS LYHVL G+LSPLD IG +++ I+
Sbjct: 65 DPCPICSDRKRDRSMICVVETPQDVLAVERSGNYGGLYHVLQGALSPLDGIGADNLRIKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E +I+E+I A +EG+ TA Y+ LK + +++TR+A G+P G +L+Y D+
Sbjct: 125 LLQRLENTEIKEVIIATDPDVEGEATALYLARLLKPVPIRVTRIARGLPAGGDLEYADEA 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLAGAVANR 193
>gi|78187144|ref|YP_375187.1| recombination protein RecR [Chlorobium luteolum DSM 273]
gi|123582928|sp|Q3B3D7|RECR_PELLD RecName: Full=Recombination protein recR
gi|78167046|gb|ABB24144.1| RecR protein [Chlorobium luteolum DSM 273]
Length = 204
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 131/203 (64%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + IE LI +R+PG G ++ARR ++++++ LA A+ ++ ++V CS+C
Sbjct: 2 QYSSSSIEALIDAFSRLPGVGRKTARRLAMYVLQQPRLEAERLARALIDVKDRVIRCSVC 61
Query: 64 GNVD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC+IC Q RD +VI VVE D+ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNVTDREEDPCSICTSQGRDRTVICVVESPVDVLAFEKTGHYRGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIE---VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI I+ L+ R+ + +RE++ A++ TIEG+TT+ Y+ LK + V++T++A GIP
Sbjct: 122 PDDIKIRELLGRLSPEGIGGVREIVLALNPTIEGETTSLYLSRLLKPLGVEVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 VGAELEFIDEATLSRAMEGRSAV 204
>gi|187251872|ref|YP_001876354.1| recombinational DNA repair protein [Elusimicrobium minutum Pei191]
gi|186972032|gb|ACC99017.1| Recombinational DNA repair protein [Elusimicrobium minutum Pei191]
Length = 197
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 2/196 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + L++ L R+PG GPR A R + + +K + + A++ + + LCSIC
Sbjct: 2 KSFDRLVRALRRLPGVGPRQAERFSAYFLKTSDSEIDEFINALSALRENIHLCSICFAYS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D R+ +I VVED D+ A+E++ A LYHVL G+LSP+D G E+I I
Sbjct: 62 EDGVCDICEDSSRERDIICVVEDPQDIEAIEKTGAFKGLYHVLHGALSPIDGRGVENIKI 121
Query: 128 QSLIERIEVKK--IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LIERI + +RE+I A EG+TTA YI D L+G+ K++R+ YG+P+G +LDY
Sbjct: 122 RELIERIHNSQTPVREVIIATDPDTEGETTALYIADALRGLVDKVSRIGYGVPLGGDLDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LD+ T+ +++ RT L
Sbjct: 182 LDEMTLTYSLKGRTKL 197
>gi|156339807|ref|XP_001620267.1| hypothetical protein NEMVEDRAFT_v1g223282 [Nematostella vectensis]
gi|156204949|gb|EDO28167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 124/194 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++R+PG G R+A R LHL+K+ + G LAEA+ + C C
Sbjct: 3 FSSKLLENAVNEVSRLPGIGKRTALRLVLHLLKQPAEHTGYLAEAITQFRTTIKSCEKCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T C IC + R++ ++ VVED+ D+ A+E + LYHVLGG +SP++ IGP +
Sbjct: 63 NISDTVLCEICNNPNRNSEIVCVVEDIRDVMAIESTAQFRGLYHVLGGKISPIEGIGPHN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+E++ +++ELIFA+S+T+EG TT YI +++ ++ + +A GI +G EL+
Sbjct: 123 LQIESLVEKVANGEVKELIFALSSTMEGDTTNFYIFKQIEKYNIITSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSIVNR 196
>gi|77917991|ref|YP_355806.1| recombination protein RecR [Pelobacter carbinolicus DSM 2380]
gi|123574983|sp|Q3A7K8|RECR_PELCD RecName: Full=Recombination protein recR
gi|77544074|gb|ABA87636.1| DNA replication and repair protein RecR [Pelobacter carbinolicus
DSM 2380]
Length = 199
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
L+ A++PG G ++A R TL ++++ Q L EA+ + + CS C
Sbjct: 8 FNRLVGEFAKLPGIGRKTAVRLTLFMLRQTSQDALALGEAVRELKERTRFCSRCFYFTEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D RD +I VVE+ D+ A+ERS++ YHVL GSLSPLD IGP+D+ I +
Sbjct: 68 DPCPLCTDVGRDDQLICVVEEPQDVIAIERSRSFRGRYHVLHGSLSPLDGIGPDDLKIDA 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ ++E++ A + +EG+ TA Y+ ++ VK+TRLA+GIP GS+L+Y+D+
Sbjct: 128 LLERLQQNNVKEVLLATNFDVEGEATALYLAKVIQPFGVKVTRLAHGIPTGSDLEYVDEA 187
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 188 TVNHAVEGRREL 199
>gi|294785975|ref|ZP_06751262.1| recombination protein RecR [Fusobacterium sp. 3_1_27]
gi|294486312|gb|EFG33675.1| recombination protein RecR [Fusobacterium sp. 3_1_27]
Length = 197
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCSICSDNIRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|269217438|ref|ZP_06161292.1| recombination protein RecR [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269213164|gb|EEZ79504.1| recombination protein RecR [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 298
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H++ + + + LA A+ + KV C ICGNV
Sbjct: 9 VQELIDELGRLPGVGPKSAQRIAFHVLAEDPEEVKALASALLRVKEKVRFCEICGNVTEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +R SVI VVE+ D+ A+ER++ YHVLGGS++P+ +GP+D+ I+
Sbjct: 69 EVCSICTDPRRMDSVICVVEESKDIVAIERTREYRGRYHVLGGSINPIQGVGPDDLRIRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A IEG+ TA Y++ L I V ++RLA G+P+G +L+Y D+
Sbjct: 129 LISRLSDGAVAEVIIATDPNIEGEATAAYLIRILSSIGVAVSRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 189 TLSRAFEGR 197
>gi|254555741|ref|YP_003062158.1| recombination protein RecR [Lactobacillus plantarum JDM1]
gi|254044668|gb|ACT61461.1| recombination protein RecR [Lactobacillus plantarum JDM1]
Length = 199
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + + A+++ + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVE+ D+ A+E+ K N LYHVL G LSP+D GPEDI I S
Sbjct: 67 DPCVICKDKSRDQSTVLVVEEAKDVMAMEKVKEYNGLYHVLHGVLSPIDGKGPEDINIAS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS++ Y D+
Sbjct: 127 LLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSDIQYADE 186
Query: 189 GTIFEAIRSR 198
T+F+A+ R
Sbjct: 187 MTLFKAVEGR 196
>gi|167465483|ref|ZP_02330572.1| recombination protein RecR [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 178
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 114/172 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +R+PG GP++A R H+++ KE+ + A+A+ N+ + CS+C N+
Sbjct: 7 ISKLIDAFSRLPGVGPKTAGRLAFHVLRMKEEEVLDFAKALVNVKRNLHYCSVCCNITDV 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+I VV++ DL A+ER+K + YHVL G++SP++ IGP+ I I
Sbjct: 67 DPCRICQDKSRDDSIICVVQEPKDLAAMERTKEFDGYYHVLHGAISPMEGIGPDQIHIAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
L++R+ +K++ELI A + IEG+ TA YI +KG +K+TR+A G+P+G
Sbjct: 127 LLKRLGDEKVQELILATNPNIEGEATAMYISRLVKGFGLKVTRIARGLPVGG 178
>gi|262066083|ref|ZP_06025695.1| recombination protein RecR [Fusobacterium periodonticum ATCC 33693]
gi|291380177|gb|EFE87695.1| recombination protein RecR [Fusobacterium periodonticum ATCC 33693]
Length = 197
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 116/191 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + + V CS+CGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSVCGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SLIER+ + I E+I A + +EG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLIERLGKEDIEEIILATNPNLEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|229819048|ref|YP_002880574.1| recombination protein RecR [Beutenbergia cavernae DSM 12333]
gi|229564961|gb|ACQ78812.1| recombination protein RecR [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H++ +G LA A+ + +V C CGNV
Sbjct: 6 VQDLITELGRLPGVGPKSAQRIAFHVLAADPDDVGRLAHALTEVKARVRFCETCGNVSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D +R+A+++ VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D+ I+
Sbjct: 66 AQCRICLDPRRNAAILCVVEEPKDVVAIERTREFRGRYHVLGGAINPIDGVGPDDLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +EG+ TA Y+ L G+ + ++RLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGQVTEVIIATDPNVEGEATATYLARMLAGMGITVSRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|116495713|ref|YP_807447.1| recombination protein RecR [Lactobacillus casei ATCC 334]
gi|191639201|ref|YP_001988367.1| recombination protein RecR [Lactobacillus casei BL23]
gi|301067268|ref|YP_003789291.1| recombinational DNA repair protein [Lactobacillus casei str. Zhang]
gi|122262885|sp|Q035W7|RECR_LACC3 RecName: Full=Recombination protein recR
gi|238693007|sp|B3W9Z0|RECR_LACCB RecName: Full=Recombination protein recR
gi|116105863|gb|ABJ71005.1| DNA replication and repair protein RecR [Lactobacillus casei ATCC
334]
gi|190713503|emb|CAQ67509.1| Recombination protein recR [Lactobacillus casei BL23]
gi|300439675|gb|ADK19441.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus
casei str. Zhang]
gi|327383279|gb|AEA54755.1| Recombination protein recR [Lactobacillus casei LC2W]
gi|327386462|gb|AEA57936.1| Recombination protein recR [Lactobacillus casei BD-II]
Length = 199
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG G ++A R + + + + A+++ + CSICGN+
Sbjct: 7 ISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGNITDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ I+S
Sbjct: 67 DPCAICRDKSRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDLNIES 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 187 MTLMKAVEGRTEL 199
>gi|163789944|ref|ZP_02184380.1| recombination protein RecR [Carnobacterium sp. AT7]
gi|159874884|gb|EDP68952.1| recombination protein RecR [Carnobacterium sp. AT7]
Length = 198
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG G ++A R + +E+ + A+A+ + + CSICG +
Sbjct: 7 ISKLMDSYMKLPGIGAKTAARLAFFTIDMREEDVTDFAKALISAKRDLHYCSICGQITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S+++VVED D+ ALE+ + + +YHVL G LSP++ GPEDI I S
Sbjct: 67 DPCQICQDKSRDRSIVLVVEDPKDVMALEKMREYHGVYHVLHGVLSPIEGTGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ +I E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLQSDEINEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|262407940|ref|ZP_06084488.1| recombination protein RecR [Bacteroides sp. 2_1_22]
gi|294644003|ref|ZP_06721785.1| recombination protein RecR [Bacteroides ovatus SD CC 2a]
gi|294807757|ref|ZP_06766550.1| recombination protein RecR [Bacteroides xylanisolvens SD CC 1b]
gi|262354748|gb|EEZ03840.1| recombination protein RecR [Bacteroides sp. 2_1_22]
gi|292640656|gb|EFF58892.1| recombination protein RecR [Bacteroides ovatus SD CC 2a]
gi|294445193|gb|EFG13867.1| recombination protein RecR [Bacteroides xylanisolvens SD CC 1b]
Length = 205
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 ETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPNDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|94969000|ref|YP_591048.1| recombination protein RecR [Candidatus Koribacter versatilis
Ellin345]
gi|166221918|sp|Q1IQ76|RECR_ACIBL RecName: Full=Recombination protein recR
gi|94551050|gb|ABF40974.1| DNA replication and repair protein RecR [Candidatus Koribacter
versatilis Ellin345]
Length = 199
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 122/189 (64%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L ++PG G +SA+R H+++ LA+A+ ++ K+ LCSIC N+ DPC
Sbjct: 11 LIDELKKLPGVGNKSAQRLAFHILRSSNDDAELLADAVRDVKAKLRLCSICNNITDVDPC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C + R+ VI VVE+ ++ A+E+++ N +YHVL G+LSPL +GPE + I +LI+
Sbjct: 71 TYCANPTRNQQVICVVEEPTNISAVEKTRHFNGVYHVLHGALSPLHGVGPEHLRISNLIK 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E K E+I A + T+EG+ TA Y+ LK V++TR+A G+P+GS+++Y D+ T+
Sbjct: 131 RVEGGKAEEVILATNPTVEGEATATYLSKILKAEGVRVTRIATGVPVGSDIEYADEVTMQ 190
Query: 193 EAIRSRTVL 201
+A+ R L
Sbjct: 191 KAMEGRREL 199
>gi|323352704|ref|ZP_08087674.1| recombination protein R [Streptococcus sanguinis VMC66]
gi|322121740|gb|EFX93486.1| recombination protein R [Streptococcus sanguinis VMC66]
Length = 198
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I NLI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IANLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|237716337|ref|ZP_04546818.1| recombination protein recR [Bacteroides sp. D1]
gi|229443984|gb|EEO49775.1| recombination protein recR [Bacteroides sp. D1]
Length = 220
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 25 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 84
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 85 ETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPNDLQIES 144
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 145 LVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVGDELEYADEV 204
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 205 TLGRSIVNRTLF 216
>gi|328950358|ref|YP_004367693.1| Recombination protein recR [Marinithermus hydrothermalis DSM 14884]
gi|328450682|gb|AEB11583.1| Recombination protein recR [Marinithermus hydrothermalis DSM 14884]
Length = 197
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 120/187 (64%), Gaps = 3/187 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L++ LAR+PG GP+SA++ L+L + E L +A+ + +V C CGN+ +
Sbjct: 9 QLVRSLARLPGVGPKSAQKLALYLAQHAEAA-ETLEQALRGVRERVRPCVRCGNLAEAEL 67
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD VI VVE DL A+E+S N +YHVLGG+L+PL+ IGPED+ + L+
Sbjct: 68 CPVCADPGRDHGVICVVETPGDLLAIEKSGEYNGVYHVLGGALNPLEGIGPEDLRVAELL 127
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
ER+E ++E+I A S T+EG+ TA Y+ + LK ++ TR AYG+P+G L+Y+D+ T+
Sbjct: 128 ERLE--GVQEVILATSMTVEGEATAGYLAELLKARGLRATRPAYGLPVGGALEYVDEVTL 185
Query: 192 FEAIRSR 198
A+ R
Sbjct: 186 ARALAHR 192
>gi|160886051|ref|ZP_02067054.1| hypothetical protein BACOVA_04057 [Bacteroides ovatus ATCC 8483]
gi|156108864|gb|EDO10609.1| hypothetical protein BACOVA_04057 [Bacteroides ovatus ATCC 8483]
Length = 241
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 46 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 105
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 106 ETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPSDLQIES 165
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 166 LVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISIGDELEYADEV 225
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 226 TLGRSIVNRTLF 237
>gi|24217032|ref|NP_714513.1| recombinational DNA repair protein [Leptospira interrogans serovar
Lai str. 56601]
gi|45659291|ref|YP_003377.1| recombination protein RecR [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|56749625|sp|Q72LS5|RECR_LEPIC RecName: Full=Recombination protein recR
gi|56749658|sp|Q8EY84|RECR_LEPIN RecName: Full=Recombination protein recR
gi|24198441|gb|AAN51531.1| recombinational DNA repair protein [Leptospira interrogans serovar
Lai str. 56601]
gi|45602537|gb|AAS72014.1| RecR [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 201
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + ++ +I+ L+ +PG G +SA R + HL++ ++ L + + NK+ C
Sbjct: 1 MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CG+ T+ C IC+ ++RD+ VVE D++ +E ++ YHVL G +SPL+ I
Sbjct: 61 KRCGSYAETEICEICVSEKRDSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+ L+ERIE ++++E++ A + T+EG TA Y+ ++LK I V +TR+AYGI +G
Sbjct: 121 GPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
++ D T+ AIRSR L
Sbjct: 181 GSIELADQYTLGRAIRSRLQL 201
>gi|28572867|ref|NP_789647.1| recombination protein RecR [Tropheryma whipplei TW08/27]
gi|73621528|sp|Q83N83|RECR_TROW8 RecName: Full=Recombination protein recR
gi|28411000|emb|CAD67385.1| recombination protein RecR [Tropheryma whipplei TW08/27]
Length = 198
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI+ L ++PG GP+SA+R +++ + L+E + ++ +V C +CGN
Sbjct: 6 VQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCGNFSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD VI VVE+ D+ A+E+++ + LYHVLGG++SP+D +GP+D+ I+
Sbjct: 66 DECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDDLNIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I E++ A +EG+ TA YI + + +++++LA G+P+GS+L+Y D+
Sbjct: 126 LLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLGRALEGR 194
>gi|153806693|ref|ZP_01959361.1| hypothetical protein BACCAC_00964 [Bacteroides caccae ATCC 43185]
gi|149131370|gb|EDM22576.1| hypothetical protein BACCAC_00964 [Bacteroides caccae ATCC 43185]
Length = 205
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSVLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTEICQICANPQRDASTICVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVSEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|256846789|ref|ZP_05552244.1| recombination protein RecR [Fusobacterium sp. 3_1_36A2]
gi|256717755|gb|EEU31313.1| recombination protein RecR [Fusobacterium sp. 3_1_36A2]
Length = 197
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 114/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C+IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCSICSDNARNHNIICVVEESRDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|298484196|ref|ZP_07002361.1| recombination protein RecR [Bacteroides sp. D22]
gi|299145431|ref|ZP_07038499.1| recombination protein RecR [Bacteroides sp. 3_1_23]
gi|298269609|gb|EFI11205.1| recombination protein RecR [Bacteroides sp. D22]
gi|298515922|gb|EFI39803.1| recombination protein RecR [Bacteroides sp. 3_1_23]
Length = 205
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 ETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPSDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|317126766|ref|YP_004093048.1| recombination protein RecR [Bacillus cellulosilyticus DSM 2522]
gi|315471714|gb|ADU28317.1| recombination protein RecR [Bacillus cellulosilyticus DSM 2522]
Length = 198
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 122/191 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ I LI+ R+PG GP++A R +++ +E + A+A+ N ++ CS+C ++
Sbjct: 5 QPISKLIEGFMRLPGIGPKTAARLAFYVLDMREDDVLDFAKALVNAKRQLTYCSVCHHIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC D RD +V+ VV++ D+ A+E+ K LYHVL G +SP+D IGPEDI I
Sbjct: 65 DIDPCRICEDNGRDQTVLCVVQESKDVIAMEKMKEYTGLYHVLHGCISPVDGIGPEDIYI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R++ I+E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L+Y D
Sbjct: 125 PDLLKRLQDDTIQEVIIATNPNIEGEATAMYISRLIKPTGLKVTRIAHGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSR 198
+ T+ +AI R
Sbjct: 185 EVTLSKAIEGR 195
>gi|262037122|ref|ZP_06010615.1| recombination protein RecR [Leptotrichia goodfellowii F0264]
gi|261748853|gb|EEY36199.1| recombination protein RecR [Leptotrichia goodfellowii F0264]
Length = 195
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +++L+ + A++PG G +SA R +++K E+ + + + + Y+ + CS+CGN+
Sbjct: 2 KRLDDLVNVFAKLPGIGRKSAMRIAFDILEKDEKEIDDILYTIKDSYDNIKHCSVCGNLS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C ICID++R+ +VI VVE V D+ A E+S+ N LYHVLGG + PL+ + +D+ I
Sbjct: 62 EKDVCEICIDEKRNKNVICVVEGVRDIIAFEKSETYNGLYHVLGGKIDPLNGVTIDDLNI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER++ + E+I A++ +EG+TT Y+ LKG ++KI+++A GIPMG ++Y D
Sbjct: 122 EKLMERLD-GTVSEIILALNPDLEGETTNLYLTKILKGKNIKISKIASGIPMGGNIEYTD 180
Query: 188 DGTIFEAIRSR 198
T+ +++ R
Sbjct: 181 MATLGKSLEGR 191
>gi|284028401|ref|YP_003378332.1| recombination protein RecR [Kribbella flavida DSM 17836]
gi|283807694|gb|ADB29533.1| recombination protein RecR [Kribbella flavida DSM 17836]
Length = 199
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 121/191 (63%), Gaps = 3/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ E + LA + + KV C ICGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLSADETDVRRLAHVLVQVKEKVKFCEICGNVAEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ IGP+++ I+
Sbjct: 66 TMCRICRDPRRDLALICVVEEAKDVVAIERTREFRGRYHVLGGAISPIEGIGPDELRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD- 188
L++R+ ++ E+I A +EG+ TA Y+ L+ + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLASGEVTEIILATDPNLEGEATATYLSRLLRPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 189 --GTIFEAIRS 197
G FE RS
Sbjct: 186 TLGRAFEGRRS 196
>gi|152964435|ref|YP_001360219.1| recombination protein RecR [Kineococcus radiotolerans SRS30216]
gi|151358952|gb|ABS01955.1| recombination protein RecR [Kineococcus radiotolerans SRS30216]
Length = 199
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + LA+ + + +KV C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLAADAVDVKRLADVLTEVKSKVRFCEVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RDASVI VVE+ D+ A+ER++ YHVLGG++SP++ IGP+D+ ++
Sbjct: 66 RLCRVCRDPRRDASVICVVEESKDVVAIERTREFRGRYHVLGGAISPMEGIGPDDLRMRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E I A +EG+ TA Y+ LK + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLARLSDGQVTEAIIATDPNLEGEATATYLARLLKPMGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFAGRRSL 197
>gi|19703754|ref|NP_603316.1| recombination protein recR [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|24212188|sp|Q8RG96|RECR_FUSNN RecName: Full=Recombination protein recR
gi|19713888|gb|AAL94615.1| Recombination protein recR [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 197
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 112/191 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C +CGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHVCGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCNICSDNARDHRIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|260170498|ref|ZP_05756910.1| recombination protein RecR [Bacteroides sp. D2]
gi|315918842|ref|ZP_07915082.1| recombination protein recR [Bacteroides sp. D2]
gi|313692717|gb|EFS29552.1| recombination protein recR [Bacteroides sp. D2]
Length = 205
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSVITLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 ETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPIDGVGPSDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVTEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|258510127|ref|YP_003183561.1| recombination protein RecR [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476853|gb|ACV57172.1| recombination protein RecR [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 199
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 125/195 (64%), Gaps = 4/195 (2%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ IE+ +K+ PG GP++A R H+++ E + A+A+ ++ + C++C N+
Sbjct: 9 ARAIEHFMKL----PGVGPKTAARLAFHVLEMSEADVKAFAKALIDLKTGLTECAVCCNI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
PCAIC D +RD VI VV++ D+ A+ER++ + LYHVL G++SP++ +GP+DI
Sbjct: 65 TEASPCAICRDPRRDRRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGPQDIR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ R+ +I E+I A + +EG+ TA YI LK VK+TR+A+G+P+G +L+Y
Sbjct: 125 IRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQVKLTRIAHGLPVGGDLEYA 184
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 185 DEVTLAKALEGRRAL 199
>gi|308270886|emb|CBX27496.1| Recombination protein recR [uncultured Desulfobacterium sp.]
Length = 198
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 122/187 (65%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NLIK L ++PG G ++A R +H+++ ++ LA + ++ +KV +CS C + T+
Sbjct: 9 NLIKNLTKLPGVGEKTAERYAMHILRSSQKEAEQLAADILDMKHKVRICSKCFALSETEV 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC + R+ S++ V E AD+ A+E+S + N LYH+L G LSP++ IGP+DI I+ LI
Sbjct: 69 CHICSNPSRNNSLLCVTEQPADMVAIEKSGSFNGLYHILSGVLSPINGIGPDDIKIKELI 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+RIE KI E++ A S ++EG+ TA YI L V ITR+A G+P+G +L Y+D T+
Sbjct: 129 KRIEEGKITEVVVATSTSMEGEATASYIAQCLSKYTVNITRIASGVPIGGDLKYVDQVTL 188
Query: 192 FEAIRSR 198
+A+ +R
Sbjct: 189 KKAMETR 195
>gi|119356989|ref|YP_911633.1| recombination protein RecR [Chlorobium phaeobacteroides DSM 266]
gi|166221930|sp|A1BFN2|RECR_CHLPD RecName: Full=Recombination protein recR
gi|119354338|gb|ABL65209.1| recombination protein RecR [Chlorobium phaeobacteroides DSM 266]
Length = 205
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 129/204 (63%), Gaps = 6/204 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI AR+PG G ++A+R +H++ + LA+A+ ++ ++V CS C
Sbjct: 2 RYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSEC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV +DPC +C RD +VI VVE DL A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDRDSDPCVLCRSSGRDRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
P+DI ++ L+ R+ E ++RE++ A++ T+EG+TT+ YI LK + + ++++A GI
Sbjct: 122 PDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIARGI 181
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 PVGAELEFIDEATLSRAMEGRSAM 205
>gi|323701678|ref|ZP_08113350.1| recombination protein RecR [Desulfotomaculum nigrificans DSM 574]
gi|323533451|gb|EGB23318.1| recombination protein RecR [Desulfotomaculum nigrificans DSM 574]
Length = 200
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 123/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ A++PG GP++A+R H++ + LA A+ + + CSIC N+
Sbjct: 8 VARLVDEFAKLPGIGPKTAQRLAFHILNAPPEAAQNLARALIEVRQSIKRCSICCNLTDE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R+ ++ VVE+ D+ A+E+++ LYHVL G++SP++ +GP+++ I+
Sbjct: 68 DPCHICRDTTRNPKILCVVEEPRDVVAMEKARGYRGLYHVLHGAISPIEGVGPDNLTIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ ++ E+I A ++ +EG+TTA Y+ LK + VK+TR+A+GIP+GS+L+Y D
Sbjct: 128 LLNRLQTGEVEEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLEYADAM 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLNKALEGR 196
>gi|167629259|ref|YP_001679758.1| recombination protein recr [Heliobacterium modesticaldum Ice1]
gi|229890152|sp|B0TB20|RECR_HELMI RecName: Full=Recombination protein recR
gi|167591999|gb|ABZ83747.1| recombination protein recr [Heliobacterium modesticaldum Ice1]
Length = 199
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI+ L+++PG GP++A+R HL+ LA+A+ ++K CS+C
Sbjct: 2 RYYAEPVGRLIEELSKLPGVGPKTAQRLAFHLLHVPRNEAVALAKAIVEAHDKTLYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC IC D RD +VI VVE+ D+ A+E+++ YHVL G+LSP++ +GPE
Sbjct: 62 TNLTDRDPCRICSDANRDRAVICVVEEPRDVVAVEKTREYRGHYHVLHGALSPIEGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I L+ R+ +++E+I A + T+EG+ TA Y+ +K + VK+TR+A+G+P+G +L
Sbjct: 122 QLRISQLMARLADPELKEVIVATNPTVEGEATAAYLARLIKPMGVKVTRIAHGLPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R L
Sbjct: 182 EYADQVTLLRAMEGRREL 199
>gi|218289070|ref|ZP_03493307.1| recombination protein RecR [Alicyclobacillus acidocaldarius LAA1]
gi|218240895|gb|EED08073.1| recombination protein RecR [Alicyclobacillus acidocaldarius LAA1]
Length = 199
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 125/195 (64%), Gaps = 4/195 (2%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ IE+ +K+ PG GP++A R H+++ E + A+A+ ++ + C++C N+
Sbjct: 9 ARAIEHFMKL----PGVGPKTAARLAFHVLEMSEADVRAFAKALIDLKTGLTECAVCCNI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
PCAIC D +RD VI VV++ D+ A+ER++ + LYHVL G++SP++ +GP+DI
Sbjct: 65 TEASPCAICRDPRRDQRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGPQDIR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ R+ +I E+I A + +EG+ TA YI LK VK+TR+A+G+P+G +L+Y
Sbjct: 125 IRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQVKLTRIAHGLPVGGDLEYA 184
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 185 DEVTLAKALEGRRAL 199
>gi|28377568|ref|NP_784460.1| recombination protein RecR [Lactobacillus plantarum WCFS1]
gi|300769762|ref|ZP_07079644.1| recombination protein R [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179720|ref|YP_003923848.1| recombination protein RecR [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|38258541|sp|Q88YP8|RECR_LACPL RecName: Full=Recombination protein recR
gi|28270400|emb|CAD63303.1| recombination protein RecR [Lactobacillus plantarum WCFS1]
gi|300492670|gb|EFK27856.1| recombination protein R [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045211|gb|ADN97754.1| recombination protein RecR [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 199
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + + A+++ + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVE+ D+ A+E+ K N LYHVL G LSP+D GPEDI I S
Sbjct: 67 DPCVICKDKSRDQSTVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPEDINIAS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS++ Y D+
Sbjct: 127 LLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSDIQYADE 186
Query: 189 GTIFEAIRSR 198
T+F+A+ R
Sbjct: 187 MTLFKAVEGR 196
>gi|254304296|ref|ZP_04971654.1| recombination protein R [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148324488|gb|EDK89738.1| recombination protein R [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 197
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCNICSDNARNHNIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|186684245|ref|YP_001867441.1| recombination protein RecR [Nostoc punctiforme PCC 73102]
gi|186466697|gb|ACC82498.1| recombination protein RecR [Nostoc punctiforme PCC 73102]
Length = 247
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP+SA+R LH++K+ E + LA+A+ ++ LCS+C
Sbjct: 51 VYARPLARLIEQLQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIEAKKQIGLCSVCF 110
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + RD + I VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 111 HLSAEPVCEICRNANRDNNTICVVADPRDVIALEKTREYKGKYHVLGGVISPIDGIGPEQ 170
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L R+ +K +E+I AIS ++EG+TT YI LK K+TR+A+G+P+G +L+
Sbjct: 171 LNILALQRRVNQQKPQEVILAISPSVEGETTTLYIGQLLKPF-TKVTRIAFGLPVGGDLE 229
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 230 YADEVTLARALEGRREL 246
>gi|292493701|ref|YP_003529140.1| recombination protein RecR [Nitrosococcus halophilus Nc4]
gi|291582296|gb|ADE16753.1| recombination protein RecR [Nitrosococcus halophilus Nc4]
Length = 199
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ G + L++ L +PG GP+SA+R HL++ + LA+A+ K+ C C
Sbjct: 2 NLFGPSLGRLVEALRCLPGVGPKSAQRMAFHLLESDREGGQRLAQALLEALGKITHCQAC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TD C +C D QRD S + VVE +D+ A+E++ A +Y VL G LSPLD IGPE
Sbjct: 62 RILSETDLCPLCADPQRDHSQLCVVEMPSDVQAIEQATAYPGVYFVLMGHLSPLDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+G+ L +R++ +IRELI A + T+EG+ TAHY+ + + + ++R+A+G+P+G EL
Sbjct: 122 ALGMDLLAKRLDTDQIRELILATNLTVEGEATAHYLSELARSRGITVSRIAHGVPLGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+++D GT+ A + R L
Sbjct: 182 EFVDRGTLSHAFQGRHHL 199
>gi|78042767|ref|YP_361462.1| recombination protein RecR [Carboxydothermus hydrogenoformans
Z-2901]
gi|123575269|sp|Q3A8S2|RECR_CARHZ RecName: Full=Recombination protein recR
gi|77994882|gb|ABB13781.1| recombination protein RecR [Carboxydothermus hydrogenoformans
Z-2901]
Length = 199
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 131/195 (67%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + LI+ LA++PG GP++A++ L+L++ E+ LAEA+ CSIC N+
Sbjct: 4 AEPVAKLIEHLAKLPGIGPKTAQKLALYLLEIPEEEARALAEAIITARKNTRYCSICFNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
TDPCAIC + R+ +++VVE+ D+ A+ER+ + N +YHVL G LSP+ IGPED+
Sbjct: 64 TDTDPCAICRNPGRNHRLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPEDLK 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ R+ + + E+I A + T+EG+ TA Y+ LK ++ K+TR+A+G+P+GS+++Y
Sbjct: 124 VRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRIAHGLPVGSDIEYA 183
Query: 187 DDGTIFEAIRSRTVL 201
D+ TI +A+ R VL
Sbjct: 184 DELTIRKALEGRRVL 198
>gi|22536930|ref|NP_687781.1| recombination protein RecR [Streptococcus agalactiae 2603V/R]
gi|25010841|ref|NP_735236.1| recombination protein RecR [Streptococcus agalactiae NEM316]
gi|76787474|ref|YP_329513.1| recombination protein RecR [Streptococcus agalactiae A909]
gi|76798440|ref|ZP_00780679.1| recombination protein RecR [Streptococcus agalactiae 18RS21]
gi|77406741|ref|ZP_00783778.1| recombination protein RecR [Streptococcus agalactiae H36B]
gi|77409082|ref|ZP_00785798.1| recombination protein RecR [Streptococcus agalactiae COH1]
gi|77412466|ref|ZP_00788769.1| recombination protein RecR [Streptococcus agalactiae CJB111]
gi|77414688|ref|ZP_00790822.1| recombination protein RecR [Streptococcus agalactiae 515]
gi|73621516|sp|Q8E641|RECR_STRA3 RecName: Full=Recombination protein recR
gi|73621517|sp|Q8E0G7|RECR_STRA5 RecName: Full=Recombination protein recR
gi|123602003|sp|Q3K1U0|RECR_STRA1 RecName: Full=Recombination protein recR
gi|22533782|gb|AAM99653.1|AE014226_13 recombination protein RecR [Streptococcus agalactiae 2603V/R]
gi|23095220|emb|CAD46430.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562531|gb|ABA45115.1| recombination protein RecR [Streptococcus agalactiae A909]
gi|76586202|gb|EAO62721.1| recombination protein RecR [Streptococcus agalactiae 18RS21]
gi|77159266|gb|EAO70443.1| recombination protein RecR [Streptococcus agalactiae 515]
gi|77161484|gb|EAO72492.1| recombination protein RecR [Streptococcus agalactiae CJB111]
gi|77172299|gb|EAO75452.1| recombination protein RecR [Streptococcus agalactiae COH1]
gi|77174646|gb|EAO77478.1| recombination protein RecR [Streptococcus agalactiae H36B]
gi|319744790|gb|EFV97130.1| recombination protein R [Streptococcus agalactiae ATCC 13813]
Length = 198
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD SVI+VVED D+ A+E+ + N LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCLICTDKTRDQSVILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGQVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|328954116|ref|YP_004371450.1| Recombination protein recR [Desulfobacca acetoxidans DSM 11109]
gi|328454440|gb|AEB10269.1| Recombination protein recR [Desulfobacca acetoxidans DSM 11109]
Length = 201
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 120/198 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + ++ +I+ L+R PG G ++A R L+L++ + + LA+A+ ++ K+ LC
Sbjct: 1 MARNFYPAPLQKVIRGLSRWPGIGEKTATRLALYLLRAADTEVTELAQALIDLKAKIRLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C + C IC D R+ ++VV D DL ALER YHVLGG +SPLD +
Sbjct: 61 SRCFAFADQELCPICADPGRNNGQLVVVADPGDLIALERVGFFQGAYHVLGGLISPLDNV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L+ R+ + I E+I A++ ++EG+ T Y+ +L+G VK+TR+AYG+PMG
Sbjct: 121 GPRDLHISELLSRLHSEAIEEVILALNPSLEGEATTAYLAQELQGKPVKVTRIAYGLPMG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
+L Y D TI E++R R
Sbjct: 181 GDLKYADQQTIKESLRHR 198
>gi|168184983|ref|ZP_02619647.1| recombination protein RecR [Clostridium botulinum Bf]
gi|182671960|gb|EDT83921.1| recombination protein RecR [Clostridium botulinum Bf]
Length = 198
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+CGN
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVCGNFTDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPEDIKLKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI+ + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIRRID-GSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPIGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLAKALEGRIEL 198
>gi|187776531|ref|ZP_02993004.1| hypothetical protein CLOSPO_00036 [Clostridium sporogenes ATCC
15579]
gi|187775190|gb|EDU38992.1| hypothetical protein CLOSPO_00036 [Clostridium sporogenes ATCC
15579]
Length = 201
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+CGN
Sbjct: 11 IEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVCGNFTDK 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S+I V+E D+ ++E+ + N +YHVL G++SP+ GPEDI ++
Sbjct: 71 DPCAICGNPNRDKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPEDIKLRE 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R++ + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 131 LIRRVD-GSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 190 TLAKALEGRIEL 201
>gi|113475124|ref|YP_721185.1| recombination protein RecR [Trichodesmium erythraeum IMS101]
gi|110166172|gb|ABG50712.1| DNA replication and repair protein RecR [Trichodesmium erythraeum
IMS101]
Length = 182
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GP++A+R L+++K+ E + LAEA+ + K+ LC C ++ C IC + Q
Sbjct: 1 MPGVGPKTAQRLALYIIKRPEAEIQALAEALVDARKKIGLCQKCFHLSAEPICEICRNPQ 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
RD VI VV D DL ALE+++ YHVLGG +SP+D IGPE + IQ L+ R+ + I
Sbjct: 61 RDKEVICVVCDSRDLIALEKTREYKGQYHVLGGVISPMDGIGPEQLSIQPLVRRVSQENI 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
+E+I AIS ++EG+TT Y+ L+ K+TR+A+G+PMG +L+Y D+ T+ A+ R
Sbjct: 121 QEVIIAISPSVEGETTTLYVGQLLRPF-TKVTRIAFGLPMGGDLEYADELTLARALEGRQ 179
Query: 200 VL 201
L
Sbjct: 180 EL 181
>gi|257452755|ref|ZP_05618054.1| recombination protein recR [Fusobacterium sp. 3_1_5R]
gi|257466876|ref|ZP_05631187.1| recombination protein recR [Fusobacterium gonidiaformans ATCC
25563]
gi|315918024|ref|ZP_07914264.1| recombination protein recR [Fusobacterium gonidiaformans ATCC
25563]
gi|317059296|ref|ZP_07923781.1| recombination protein recR [Fusobacterium sp. 3_1_5R]
gi|313684972|gb|EFS21807.1| recombination protein recR [Fusobacterium sp. 3_1_5R]
gi|313691899|gb|EFS28734.1| recombination protein recR [Fusobacterium gonidiaformans ATCC
25563]
Length = 197
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ EQ + +A+ +I K+ C +CG+
Sbjct: 4 KSLEKLIDQFHKLPGIGRKSATRLGFHILDYSEQEIDDFIQALEDIKGKIHRCPVCGDYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD I VVED D+ +LE++ LYH+LGG L+PL I P+ + +
Sbjct: 64 EEELCPICSDEARDHKSICVVEDSRDVVSLEKTGKYRGLYHILGGKLAPLQGITPDKLNL 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ + ++E+I A++ +EG+TTA Y++ LK DVKIT++A GIPMG L++ D
Sbjct: 124 KSLLERLAKEDVQEIILALNPDLEGETTAMYLVKLLKPFDVKITKIASGIPMGGNLEFAD 183
Query: 188 DGTIFEAIRSR 198
TI A+ +R
Sbjct: 184 SATIARALDAR 194
>gi|148378040|ref|YP_001252581.1| recombination protein recR [Clostridium botulinum A str. ATCC 3502]
gi|153932718|ref|YP_001382439.1| recombination protein RecR [Clostridium botulinum A str. ATCC
19397]
gi|153937733|ref|YP_001385992.1| recombination protein RecR [Clostridium botulinum A str. Hall]
gi|153938661|ref|YP_001389395.1| recombination protein RecR [Clostridium botulinum F str. Langeland]
gi|168181145|ref|ZP_02615809.1| recombination protein recR [Clostridium botulinum NCTC 2916]
gi|170756536|ref|YP_001779656.1| recombination protein RecR [Clostridium botulinum B1 str. Okra]
gi|170758489|ref|YP_001785359.1| recombination protein RecR [Clostridium botulinum A3 str. Loch
Maree]
gi|226947246|ref|YP_002802337.1| recombination protein RecR [Clostridium botulinum A2 str. Kyoto]
gi|237793344|ref|YP_002860896.1| recombination protein RecR [Clostridium botulinum Ba4 str. 657]
gi|166221932|sp|A7FQ67|RECR_CLOB1 RecName: Full=Recombination protein recR
gi|166221933|sp|A5HXS8|RECR_CLOBH RecName: Full=Recombination protein recR
gi|166221934|sp|A7G9D5|RECR_CLOBL RecName: Full=Recombination protein recR
gi|229890145|sp|B1IDW8|RECR_CLOBK RecName: Full=Recombination protein recR
gi|229890146|sp|B1KRT7|RECR_CLOBM RecName: Full=Recombination protein recR
gi|254790760|sp|C1FPJ6|RECR_CLOBJ RecName: Full=Recombination protein recR
gi|259563688|sp|C3KXT0|RECR_CLOB6 RecName: Full=Recombination protein recR
gi|148287524|emb|CAL81586.1| recombination protein [Clostridium botulinum A str. ATCC 3502]
gi|152928762|gb|ABS34262.1| recombination protein RecR [Clostridium botulinum A str. ATCC
19397]
gi|152933647|gb|ABS39146.1| recombination protein RecR [Clostridium botulinum A str. Hall]
gi|152934557|gb|ABS40055.1| recombination protein RecR [Clostridium botulinum F str. Langeland]
gi|169121748|gb|ACA45584.1| recombination protein RecR [Clostridium botulinum B1 str. Okra]
gi|169405478|gb|ACA53889.1| recombination protein RecR [Clostridium botulinum A3 str. Loch
Maree]
gi|182668013|gb|EDT79992.1| recombination protein recR [Clostridium botulinum NCTC 2916]
gi|226843381|gb|ACO86047.1| recombination protein RecR [Clostridium botulinum A2 str. Kyoto]
gi|229261177|gb|ACQ52210.1| recombination protein RecR [Clostridium botulinum Ba4 str. 657]
gi|295317503|gb|ADF97880.1| recombination protein RecR [Clostridium botulinum F str. 230613]
Length = 198
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+CGN
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVCGNFTDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPEDIKLKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI+ + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIRRID-GSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLAKALEGRIEL 198
>gi|158337044|ref|YP_001518219.1| recombination protein RecR [Acaryochloris marina MBIC11017]
gi|189039775|sp|B0C882|RECR_ACAM1 RecName: Full=Recombination protein recR
gi|158307285|gb|ABW28902.1| recombination protein RecR [Acaryochloris marina MBIC11017]
Length = 200
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + L++ L R+PG GP+SA+R LHL+K+ + LA A+ +V CS+C ++
Sbjct: 7 RPLARLVEQLQRLPGIGPKSAQRLALHLLKRPTAEVEALANALIEAKQQVGFCSVCFHLS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC RD +VI VV D D+ ALE+++ YHVLGG +SP+D IGP+ + +
Sbjct: 67 ADPVCDICRAPSRDKTVICVVADSRDVIALEKTREFKGQYHVLGGLISPMDGIGPDQLNV 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q LI R+ K +E+I AI+ ++EG+TT Y+ LK ++TR+A+G+PMG +L+Y D
Sbjct: 127 QPLIRRVHQTKTQEVILAINPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLEYAD 185
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 186 EVTLARALEGR 196
>gi|320546372|ref|ZP_08040688.1| recombination protein R [Streptococcus equinus ATCC 9812]
gi|320448982|gb|EFW89709.1| recombination protein R [Streptococcus equinus ATCC 9812]
Length = 206
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+ + + ++ CSICGN+
Sbjct: 15 IAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLSAKRELTYCSICGNLTDD 74
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D+ R SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 75 DPCSICTDKTRKRSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKS 134
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 135 LITRLMDSEVSEVIIATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 194
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 195 TLLRAIENRTEL 206
>gi|229496601|ref|ZP_04390315.1| recombination protein RecR [Porphyromonas endodontalis ATCC 35406]
gi|229316498|gb|EEN82417.1| recombination protein RecR [Porphyromonas endodontalis ATCC 35406]
Length = 206
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 121/199 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K K +E + L+ +PG G ++A R L+++++ E L ++ + + C
Sbjct: 1 MTSKYPSKWLEKAVDQLSLLPGVGRKTALRLALYILRRPESFANLLGSSIIELRENIIYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ + C IC D RD I VVE++ D+ ++ER+ LYHVLGG +SP+D I
Sbjct: 61 ERCHNISDSPCCPICSDPSRDTQTICVVENIRDVMSIERTAQYKGLYHVLGGVISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P+D+ I+SL+ER+ ++I+E+I AIS T+EG+TT YI +L + V ++ L+ GI MG
Sbjct: 121 APQDLEIESLVERVPREQIKEVILAISPTMEGETTNFYIYKRLAPLGVHVSLLSRGIAMG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ A+R R+
Sbjct: 181 DELEYTDEVTLARALRDRS 199
>gi|91216056|ref|ZP_01253025.1| recombination protein RecR [Psychroflexus torquis ATCC 700755]
gi|91186033|gb|EAS72407.1| recombination protein RecR [Psychroflexus torquis ATCC 700755]
Length = 207
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 125/196 (63%), Gaps = 2/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E I+ +A +PG G R+A R LHL+K+ + LA+A+ ++ KV C C
Sbjct: 3 FSSKFLETAIEEIALLPGIGKRTALRLALHLLKQPQSQTTDLAKALVDLKTKVKQCKSCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC +Q RD S+I +VED+ D+ A+E ++ +YHVLGG +SP+D +GP
Sbjct: 63 NISDKELCGICANQSRDHSIICIVEDIRDVMAIENTEQYKGIYHVLGGKISPMDGVGPNQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSE 182
+ I+SL+++I+ K+ E+IFA+S+T+EG TT YI +++ +K + +A GI +G E
Sbjct: 123 LNIESLVDKIKTGKVIEVIFALSSTMEGDTTNFYIYKQIQASKHSLKTSTIARGISIGDE 182
Query: 183 LDYLDDGTIFEAIRSR 198
L+Y D+ T+ +I R
Sbjct: 183 LEYADEITLGRSILQR 198
>gi|294673627|ref|YP_003574243.1| recombination protein RecR [Prevotella ruminicola 23]
gi|294474191|gb|ADE83580.1| recombination protein RecR [Prevotella ruminicola 23]
Length = 205
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
+Q++ + +E ++ +++PG G ++A R L ++++ + + A+ + V C
Sbjct: 2 IQQQYPSQLLEKAVQEFSKLPGIGRKTALRLVLWMLRQDDSDVTQFTAAVNELKCGVKYC 61
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC DQ+RD + + VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 62 KVCHNISDTDICPICADQRRDQTTVCVVENIQDVMAIENTQQFNGLYHVLGGVISPMDGM 121
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SLI+R+ ++E+I A+S T+EG TT YI KL +K++ +A GI +G
Sbjct: 122 GPADIEIDSLIQRVGEGTVQEVILALSPTMEGDTTNFYIYRKLAPTGIKVSVIARGIAVG 181
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+EL+Y D+ T+ +I +RT+
Sbjct: 182 NELEYADEVTLGRSITNRTLF 202
>gi|313886627|ref|ZP_07820339.1| recombination protein RecR [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299535|ref|YP_004441456.1| Recombination protein recR [Porphyromonas asaccharolytica DSM
20707]
gi|312923923|gb|EFR34720.1| recombination protein RecR [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176598|gb|AEE12288.1| Recombination protein recR [Porphyromonas asaccharolytica DSM
20707]
Length = 205
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 123/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + + +E + L+ +PG G ++A R LHL+++ L EA+ ++ K+C C
Sbjct: 1 MKDQYPSQWLERAVDQLSLLPGIGRKTAMRMALHLLRQPPSYAQHLGEAIIDLRQKICYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + + C IC D QRD SV+ VVE V D+ +E++ LYHVLGG +SP+D I
Sbjct: 61 ERCHCISDSPLCDICSDPQRDQSVVCVVEQVKDVLTIEQTHRYKGLYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I+SL ER++ + IRE+I AI +T+EG TT +YI +L+ V ++ +A GI +G
Sbjct: 121 TPNDLEIESLYERVQEEPIREVILAIRSTLEGDTTNYYIYKRLESTGVLVSLIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ AI +RT
Sbjct: 181 DEIEYADEVTLGSAIANRT 199
>gi|325977795|ref|YP_004287511.1| recombination protein recR [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177723|emb|CBZ47767.1| Recombination protein recR [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 198
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|227876481|ref|ZP_03994593.1| recombination protein RecR [Mobiluncus mulieris ATCC 35243]
gi|306817440|ref|ZP_07451185.1| recombination protein R [Mobiluncus mulieris ATCC 35239]
gi|307700518|ref|ZP_07637554.1| recombination protein RecR [Mobiluncus mulieris FB024-16]
gi|227843022|gb|EEJ53219.1| recombination protein RecR [Mobiluncus mulieris ATCC 35243]
gi|304649881|gb|EFM47161.1| recombination protein R [Mobiluncus mulieris ATCC 35239]
gi|307614325|gb|EFN93558.1| recombination protein RecR [Mobiluncus mulieris FB024-16]
Length = 201
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L ++PG GP+SA+R +++ + + LA + + + C CGN+
Sbjct: 9 LQNLIDALGKMPGVGPKSAQRIAFWVLQTDPENIKNLAATLQTAKDTIRFCETCGNITEN 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D +RD S+I VVE+ D+ +LE++++ LYHVLGG++ P++ IGP+ + I+S
Sbjct: 69 PVCQICVDPRRDRSLICVVEEAKDIASLEKTRSYRGLYHVLGGAIDPINGIGPDQLRIKS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ K++E+I A + +EG+ TA Y+ L + + +RLA G+P+GS+L+Y D+
Sbjct: 129 LMERLQDAKVKEVIIATNPNVEGEATATYLSRLLATLQIPASRLASGLPVGSDLEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 189 TLSRALEGRHSL 200
>gi|254496162|ref|ZP_05109059.1| recombinational DNA repair protein RecR [Legionella drancourtii
LLAP12]
gi|254354618|gb|EET13256.1| recombinational DNA repair protein RecR [Legionella drancourtii
LLAP12]
Length = 197
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + Q LA + +++ C C N
Sbjct: 4 LNRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMSQINHCQRCMNYTEQ 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C + QRD+S++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+
Sbjct: 64 SFCALCQNPQRDSSLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPK 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I ++I+E+I A+S ++EGQTT H+I L+ + IT+LA+GIP G EL++LD
Sbjct: 124 LKNLILEEEIQEVILALSPSVEGQTTIHFIQQLLRDQSINITQLAHGIPSGGELEFLDGN 183
Query: 190 TIFEAIRSRTVL 201
TI A+R+R ++
Sbjct: 184 TIGNALRNRALI 195
>gi|322417713|ref|YP_004196936.1| recombination protein RecR [Geobacter sp. M18]
gi|320124100|gb|ADW11660.1| recombination protein RecR [Geobacter sp. M18]
Length = 197
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + L+ L ++PG G +SA R HL+K + L+E++ + KV CS+C +
Sbjct: 6 RSLTRLVGELKKLPGVGEKSALRLAFHLLKYPGNIEA-LSESLVQVKEKVRFCSLCFAIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC +RDA+ + VVE+ DL ALERS+A YHVL G+LSPL+ + P D+ I
Sbjct: 65 EDDPCWIC-SGERDAAALCVVEEPQDLLALERSRAFRGRYHVLQGALSPLNGVTPRDLRI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+E +RE++ A + ++EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y+D
Sbjct: 124 AELMQRLEGGGVREVLIATNFSVEGEATALYLTRMIKPLGIKVTRLAHGIPIGSDLEYVD 183
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 184 AATVQRAVEGRSEL 197
>gi|260905314|ref|ZP_05913636.1| recombination protein RecR [Brevibacterium linens BL2]
Length = 201
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++L++ ++PG GP+SA+R H+++ + + LA+A+ + +V C ICGNV
Sbjct: 9 LQDLVEEFGKLPGIGPKSAQRLAFHILQSESADVSSLAQALTEVKKRVRFCDICGNVSEE 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++ P+ +GP+++ I+
Sbjct: 69 AECTVCQDPRRDRSMICVVEEPKDVVAIERTREYRGLYHVLGGAIDPMAGVGPDNLRIKE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ +++E + A +EG+ TA Y++ L + V +TRLA G+P+G +L+Y D+
Sbjct: 129 LMPRLQNGEVKECVIATDPNLEGEATATYLVRLLNSLGVTVTRLASGLPVGGDLEYADEV 188
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 189 TLGRAFSGR 197
>gi|255691811|ref|ZP_05415486.1| recombination protein RecR [Bacteroides finegoldii DSM 17565]
gi|260622529|gb|EEX45400.1| recombination protein RecR [Bacteroides finegoldii DSM 17565]
Length = 205
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIMTLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 EICQICANPQRDASTICVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPSDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVRRVSEGGIKEVILALSTTMEGDTTNFYIYRKLDRLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|223939213|ref|ZP_03631095.1| recombination protein RecR [bacterium Ellin514]
gi|223892166|gb|EEF58645.1| recombination protein RecR [bacterium Ellin514]
Length = 200
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L IL+R+PG GPRSA R LHLV+ + LA+ + ++ C ICG++
Sbjct: 8 ITTLTGILSRLPGIGPRSAERLALHLVQSDVSEVKQLAQILVEARERIQTCPICGSLTEQ 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC D++RD +I +VE D+ ++E+S + YHVLGG +SPL+ +GPED+ I
Sbjct: 68 TPCSICSDERRDGGLICLVERPTDIISIEKSGTFHGRYHVLGGKISPLNGVGPEDLRISE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ + I+E++ A+ +EG T++Y+ KL ++I+R+A+G+P GS L++ D+
Sbjct: 128 LESRLSQEPIKEIVVALGTDVEGDATSNYLAKKLARPGLRISRIAHGLPAGSGLEFADEL 187
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 188 TLTHALAGR 196
>gi|270158085|ref|ZP_06186742.1| recombination protein RecR [Legionella longbeachae D-4968]
gi|289163649|ref|YP_003453787.1| Recombination and repair protein recR [Legionella longbeachae
NSW150]
gi|269990110|gb|EEZ96364.1| recombination protein RecR [Legionella longbeachae D-4968]
gi|288856822|emb|CBJ10633.1| Recombination and repair protein recR [Legionella longbeachae
NSW150]
Length = 197
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 118/189 (62%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ L +PG GP+SA+R HL++ + Q LA + N++ C C N C
Sbjct: 7 LVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMNQIQHCERCANYTEHKLC 66
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
A+C + RD+S++ VVE AD+ A+E+S A Y VL G +SPLD +GP+DIG+ L
Sbjct: 67 ALCQNSDRDSSLLCVVESPADVSAIEQSNAFQGKYFVLMGKISPLDGLGPDDIGLPRLKR 126
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I + I+E+I A+S ++EGQTT H+I L+ V +T+LA+GIP G EL++LD TI
Sbjct: 127 LIIQENIKEVILALSPSVEGQTTIHFIHQLLRDQPVNMTQLAHGIPSGGELEFLDGNTIG 186
Query: 193 EAIRSRTVL 201
A+R+R ++
Sbjct: 187 NALRNRAII 195
>gi|239630118|ref|ZP_04673149.1| recombination protein recR [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239527730|gb|EEQ66731.1| recombination protein recR [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 199
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG G ++A R + + + + A+++ + CSICGN+
Sbjct: 7 ISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGNITDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I+VVE D+ ++R++ + LYHVL G LSP++ GPED+ I+S
Sbjct: 67 DPCAICRDKSRDQSTILVVEQPKDVMIIDRAQDYHGLYHVLHGVLSPIEGRGPEDLNIES 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 187 MTLMKAVEGRTEL 199
>gi|87122722|ref|ZP_01078597.1| recombination protein RecR [Marinomonas sp. MED121]
gi|86162019|gb|EAQ63309.1| recombination protein RecR [Marinomonas sp. MED121]
Length = 198
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L +PG GP+SA++ L+L+++ Q LAE++ +KV CS C N+
Sbjct: 7 IAELIESLRCLPGVGPKSAQKMALYLLERDHQGADRLAESLRTALDKVGRCSSCRNLTED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC RD+ I +VE AD+ A+E S N Y VL G LSP+D IGP+++G+
Sbjct: 67 LECQICSATDRDSKTICIVETPADVAAMEASGRFNGRYFVLLGHLSPIDGIGPDELGLDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +E K+ E+I A ++T+EG+ T+HYI + LK D++ITR+A+G+PMG EL+Y+D
Sbjct: 127 LENIVETNKVEEVIIATNSTLEGEATSHYIAEMLKSSDIEITRIAHGVPMGGELEYVDGN 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLALALDGRKKL 198
>gi|256831656|ref|YP_003160383.1| recombination protein RecR [Jonesia denitrificans DSM 20603]
gi|256685187|gb|ACV08080.1| recombination protein RecR [Jonesia denitrificans DSM 20603]
Length = 199
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H++ + L +A+ + +V C CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILSADSDDIARLTQAIVEVKRRVRFCDECGNVAEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R A VI VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D+ I
Sbjct: 66 ERCRICRDPRRSAEVICVVEEAKDVVAIERTREFRGKYHVLGGAINPMDNVGPDDLRISE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A+ +EG+ TA Y+ L I +++TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGTVTEIILAMDPNVEGEATATYLARLLGAIGIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R ++
Sbjct: 186 TLGRAFEGRRLM 197
>gi|254520805|ref|ZP_05132861.1| recombination protein RecR [Clostridium sp. 7_2_43FAA]
gi|226914554|gb|EEH99755.1| recombination protein RecR [Clostridium sp. 7_2_43FAA]
Length = 198
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++P G ++A+R LH++ E + A+A+ + CSICGN
Sbjct: 8 IEKLIEEFAKLPSVGQKTAQRLALHVLNLPEDEVKEFADALVKARGTIKYCSICGNFTDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC + RD +I VVE D+ +E+ K N YHVL G+LSP+ GP+DI I+
Sbjct: 68 DPCSICSNPSRDKDIICVVEQPKDIMTMEKVKEYNGAYHVLHGNLSPMQGRGPQDIRIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A + IEG+ TA YI LK +D+K+TR+A GIP+G +L+Y D+
Sbjct: 128 LVARMSA-DVKEVIIATNPNIEGEATAMYISRILKPLDIKVTRIASGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLSKALEGR 195
>gi|332710481|ref|ZP_08430428.1| DNA replication and repair protein RecR [Lyngbya majuscula 3L]
gi|332350812|gb|EGJ30405.1| DNA replication and repair protein RecR [Lyngbya majuscula 3L]
Length = 198
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 121/194 (62%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG GP++A+R LH++K+ + LA+A+ +V C +C ++
Sbjct: 5 RPLARLIEELQRLPGVGPKTAQRLALHILKRPTPEVKALAQALVEAKQQVGFCRVCFHLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + RD I VV D D+ A+E+++ YHVLGG +SP+D IGPE + I
Sbjct: 65 AEPVCQICRNSNRDEKTICVVADSRDVIAIEKTREYRGKYHVLGGVISPMDGIGPEQLHI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L++R+ K I+E+I AI+ ++EG+TT YI ++ K+TR+A+G+PMG +L+Y D
Sbjct: 125 QQLVQRVSQKTIQEVILAINPSVEGETTTLYIGQLIRPF-TKVTRIAFGLPMGGDLEYAD 183
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R L
Sbjct: 184 EVTLARALEGRREL 197
>gi|46199538|ref|YP_005205.1| recombination protein recR [Thermus thermophilus HB27]
gi|73621525|sp|Q72I96|RECR_THET2 RecName: Full=Recombination protein recR
gi|46197164|gb|AAS81578.1| recombination protein recR [Thermus thermophilus HB27]
Length = 194
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 118/187 (63%), Gaps = 4/187 (2%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L + L+R+PG GP++A+R LHL KE+ +V C CGN+ +
Sbjct: 9 KLTRALSRLPGIGPKTAQRLALHLAFHKEEAEALAEALEG--LKRVRACRECGNLAEGEL 66
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ RD S++ VVE VADL+ALERS LYHVLGG+L+PL+ IGP+++ ++ L
Sbjct: 67 CPICQDEDRDRSLLAVVESVADLYALERSGEFRGLYHVLGGALNPLEGIGPKELNLEGLF 126
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R+E + E++ A S T+EG+ TA Y+ ++LK V++TR AYG+P+G L+Y D+ T+
Sbjct: 127 RRLE--GVEEVVLATSMTVEGEATALYLAEELKKRGVRVTRPAYGLPVGGSLEYADEVTL 184
Query: 192 FEAIRSR 198
A+ R
Sbjct: 185 GRALEGR 191
>gi|189346405|ref|YP_001942934.1| recombination protein RecR [Chlorobium limicola DSM 245]
gi|229890137|sp|B3EIC5|RECR_CHLL2 RecName: Full=Recombination protein recR
gi|189340552|gb|ACD89955.1| recombination protein RecR [Chlorobium limicola DSM 245]
Length = 205
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 126/204 (61%), Gaps = 6/204 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI+ A++PG G ++A+R +H++ + + LA A+ +I KV CS+C
Sbjct: 2 RYTSAAIETLIEEFAKLPGIGRKTAQRLAMHILHEPKSGAERLAGALIDIKEKVIRCSVC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC IC RD SVI VVE AD+ A E++ YHVL G +SPLD IG
Sbjct: 62 QNVTDRDADPCYICSSTGRDRSVICVVESPADVLAFEKTGHYKGQYHVLHGLVSPLDGIG 121
Query: 122 PEDIGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
P+DI I L+ ER E ++E++ A++ T+EG+TT+ YI LK + +T++A GI
Sbjct: 122 PDDIRIHELLARLGERHEAVPVKEVVLALNPTVEGETTSLYITRLLKPFGISVTKIARGI 181
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 PVGAELEFIDEATLSRAMEGRSAV 205
>gi|312866082|ref|ZP_07726303.1| recombination protein RecR [Streptococcus downei F0415]
gi|311098486|gb|EFQ56709.1| recombination protein RecR [Streptococcus downei F0415]
Length = 198
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S ++VVE+ D+ A+E+ + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICRDKTRDQSTLLVVEESKDVTAMEKIQDYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ +I E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LINRLMDSQINEVIVATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|288904860|ref|YP_003430082.1| recombination protein RecR [Streptococcus gallolyticus UCN34]
gi|288731586|emb|CBI13141.1| recombination protein RecR [Streptococcus gallolyticus UCN34]
Length = 198
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCNICTDETRDRSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|326329508|ref|ZP_08195831.1| recombination protein RecR [Nocardioidaceae bacterium Broad-1]
gi|325952675|gb|EGD44692.1| recombination protein RecR [Nocardioidaceae bacterium Broad-1]
Length = 198
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL++ + LA + + KV CS+C NV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLQADPADVHRLASILNEVKAKVKFCSVCFNVSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R+ SV+ VVE+ D+ A+ER++ YHVLGG++SP+D IGP+ + I+
Sbjct: 66 ETCRICRDPRREQSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGIGPDQLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I E+I A +EG+ TA Y+ +L + +K+TRLA G+P+G +L+Y D+
Sbjct: 126 LVQRLNDPGITEVILATDPNLEGEATATYLTRQLSPLGLKVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFAGR 194
>gi|237740850|ref|ZP_04571331.1| recombination protein recR [Fusobacterium sp. 4_1_13]
gi|229431147|gb|EEO41359.1| recombination protein recR [Fusobacterium sp. 4_1_13]
Length = 197
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICGN
Sbjct: 4 KSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICGNYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C+IC D R+ +I VVE+ D+ LE++ +YHVL G L PL+ I P ++ I
Sbjct: 64 ESDTCSICSDNIRNHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNELNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L++ D
Sbjct: 124 KSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 TATISRALDDR 194
>gi|295397255|ref|ZP_06807351.1| recombination protein R [Aerococcus viridans ATCC 11563]
gi|294974502|gb|EFG50233.1| recombination protein R [Aerococcus viridans ATCC 11563]
Length = 199
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R ++ E + A ++ + ++ CS+CGN+ +
Sbjct: 7 IAKLIDSFSKLPGIGAKTASRLAFFVLDMPEADVLQFASSLVDAKRELRYCSVCGNITQS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE V D+ ++ER + + LYHVL G LSP++ GPED+ IQ
Sbjct: 67 DPCEICADENRDRSRILVVEQVRDVVSMERMREYHGLYHVLHGVLSPMEGTGPEDLNIQP 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ +I+E+I A +AT EG+ TA Y+ +K ++++R+AYG+ +GS+++Y D+
Sbjct: 127 LLTRLQDDQIKEVIVATNATAEGEATATYLSRLIKPAGIQVSRIAYGLSVGSDIEYADEM 186
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 187 TLLRALEGR 195
>gi|333030036|ref|ZP_08458097.1| Recombination protein recR [Bacteroides coprosuis DSM 18011]
gi|332740633|gb|EGJ71115.1| Recombination protein recR [Bacteroides coprosuis DSM 18011]
Length = 205
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 121/190 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + + A+ + +V C C N+ T
Sbjct: 10 LEKAVDEFSKLPGIGKKTAMRLVLHLLRQDKSAVESFGNAIITLKREVKYCQTCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD S++ +VE++ D+ A+E ++ +YHVLGG +SP+D IGP D+ IQS
Sbjct: 70 ESCQICSNPQRDHSLVCIVENIRDVMAIEATQQYRGVYHVLGGIISPMDGIGPSDLEIQS 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ I+E+IFA+S T+EG TT YI KL+ V ++ L+ G+ +G EL Y D+
Sbjct: 130 LIDRVQAGGIKEVIFALSTTMEGDTTNFYIYRKLEKSGVDMSVLSRGVSVGDELAYADEV 189
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 190 TLGRSIVNRT 199
>gi|194477243|ref|YP_002049422.1| RecR protein [Paulinella chromatophora]
gi|171192250|gb|ACB43212.1| RecR protein [Paulinella chromatophora]
Length = 203
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI R+PG GPR+A+R LHL+++ E+ + L +A+ Y++V C C ++
Sbjct: 11 RPLARLIDQFERLPGIGPRTAQRLALHLLRQPEEQIRSLIDALQAAYSQVGQCQCCFHLS 70
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + R ++ +V D DL ALER++ YHVLGG +SP+D IGPE + I
Sbjct: 71 ADVLCEICSNNDRHNGLLCIVADSRDLLALERTREYKGSYHVLGGLISPMDGIGPELLQI 130
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
QSLI+RI+ + E I A++ TIEG TT+ Y+ LK +++R+AYG+P+GSEL+Y D
Sbjct: 131 QSLIDRIKKDNVTETILALTPTIEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYTD 189
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 190 EVTLTRALEGR 200
>gi|172056064|ref|YP_001812524.1| recombination protein RecR [Exiguobacterium sibiricum 255-15]
gi|229890150|sp|B1YGD0|RECR_EXIS2 RecName: Full=Recombination protein recR
gi|171988585|gb|ACB59507.1| recombination protein RecR [Exiguobacterium sibiricum 255-15]
Length = 199
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG GP++A R H++ +E + +A+ + + CSICGN+
Sbjct: 7 ISRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLMFGKALVSAKRDISYCSICGNITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D+ R+ +++ VV+D D+ A+E+ + LYHVL G++SP++ IGPEDI + S
Sbjct: 67 DPCYVCSDKHRNRTIVCVVQDSRDVIAMEKMRDYQGLYHVLHGAISPMEGIGPEDINVSS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + I E+I A + IEG+ TA Y+ LK +++TR+A+G+P+G +L+Y D+
Sbjct: 127 LLTRLQADEAITEIILATNPNIEGEATAMYLSRLLKPTGIRVTRIAHGLPVGGDLEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLSRAMEGRREL 199
>gi|55981569|ref|YP_144866.1| recombination protein RecR [Thermus thermophilus HB8]
gi|73621526|sp|Q5SHY0|RECR_THET8 RecName: Full=Recombination protein recR
gi|55772982|dbj|BAD71423.1| RecR protein [Thermus thermophilus HB8]
Length = 194
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 118/187 (63%), Gaps = 4/187 (2%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L + L+R+PG GP++A+R LHL KE+ +V C CGN+ +
Sbjct: 9 KLTRALSRLPGIGPKTAQRLALHLAFHKEEAEALAEALEG--IKRVRACRECGNLAEGEL 66
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ RD S++ VVE VADL+ALERS LYHVLGG+L+PL+ IGP+++ ++ L
Sbjct: 67 CPICQDEDRDRSLLAVVESVADLYALERSGEFRGLYHVLGGALNPLEGIGPKELNLEGLF 126
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R+E + E++ A S T+EG+ TA Y+ ++LK V++TR AYG+P+G L+Y D+ T+
Sbjct: 127 RRLE--GVEEVVLATSMTVEGEATALYLAEELKKRGVRVTRPAYGLPVGGSLEYADEVTL 184
Query: 192 FEAIRSR 198
A+ R
Sbjct: 185 GRALEGR 191
>gi|52842955|ref|YP_096754.1| recombination protein RecR [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|73621495|sp|Q5ZRX0|RECR_LEGPH RecName: Full=Recombination protein recR
gi|52630066|gb|AAU28807.1| recombinational DNA repair protein RecR [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 199
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+T + L++ L +PG GP+SA+R HL++ + Q LA + + C C
Sbjct: 1 MTMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N CA+C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+D
Sbjct: 61 NYTEQTLCALCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL+
Sbjct: 121 IGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+LD TI A+++R V+
Sbjct: 181 FLDGNTISSALKNRAVI 197
>gi|310819968|ref|YP_003952326.1| Recombination protein [Stigmatella aurantiaca DW4/3-1]
gi|309393040|gb|ADO70499.1| Recombination protein [Stigmatella aurantiaca DW4/3-1]
Length = 197
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+T + L+ LA++PG G ++A+R H+++ + L++A+ + KV LC+ C
Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRAPSEYAVDLSQAIREVKEKVHLCTRCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ T+ C C D +RD V+ VVE ADL ALER++ YHVL G LSPL+ IGP+
Sbjct: 61 SLTDTELCGFCRDSRRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGIGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ER+ K+ E+I A + +EG+ T+ Y+M LK + ++++R+A G+PMG +L+
Sbjct: 121 LRIRELLERLADSKVEEIILATNPDVEGEATSLYLMRLLKPLGLRVSRIAQGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +A+ +R L
Sbjct: 181 YADQATLAKALSARREL 197
>gi|116617406|ref|YP_817777.1| DNA replication and repair protein RecR [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096253|gb|ABJ61404.1| DNA replication and repair protein RecR [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 213
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 121/195 (62%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R + + E+ + ++A+ + + CSICGN+ T
Sbjct: 19 IAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSICGNITAT 78
Query: 70 D--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D PC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPEDI +
Sbjct: 79 DTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPEDINL 138
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ E ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS++DY
Sbjct: 139 PSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSDIDYA 198
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A++ RT L
Sbjct: 199 DELTLIKAVQGRTKL 213
>gi|21263932|sp|Q8YMF7|RECR_ANASP RecName: Full=Recombination protein recR
Length = 197
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + LI+ L R+PG GP++A+R LH++K+ E + LA+A+ ++ LCS+C ++
Sbjct: 3 ARPLARLIEQLQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHL 62
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC + R+ + I VV D D+ ALE+++ YHVLGG +SP+D IGPE +
Sbjct: 63 SSEPVCEICRNPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQLT 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L+ R+ ++ +E+I AIS ++EG+TT Y+ LK K+TR+A+G+P+G +L+Y
Sbjct: 123 ITPLLRRVSQQQPKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYA 181
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ R L
Sbjct: 182 DEITLARALEGRREL 196
>gi|322804302|emb|CBZ01852.1| recombination protein RecR [Clostridium botulinum H04402 065]
Length = 198
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+CGN
Sbjct: 8 IEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALIKARGTIKYCSVCGNFTDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GPEDI ++
Sbjct: 68 DPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPEDIKLRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI+ + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+
Sbjct: 128 LIRRID-GSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLAKALEGRIEL 198
>gi|189502035|ref|YP_001957752.1| recombination protein RecR [Candidatus Amoebophilus asiaticus 5a2]
gi|229485580|sp|B3ES21|RECR_AMOA5 RecName: Full=Recombination protein recR
gi|189497476|gb|ACE06023.1| hypothetical protein Aasi_0625 [Candidatus Amoebophilus asiaticus
5a2]
Length = 200
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 122/193 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T K IE I ++ +PG G ++A R L L+K + LA ++ + +++ C C N
Sbjct: 4 TSKLIEEAINEISALPGIGKKTALRLVLFLLKSNPEQTERLATSLHKLRSQIQYCQKCHN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T C+IC + RD +I VVE++ D+ A+E + +YHVLGG +SP++ IGPE +
Sbjct: 64 ISDTTLCSICANPHRDTGLICVVENIQDVIAIENTAQYKGIYHVLGGLISPVEGIGPEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L++R++ ++ +E+IFA+S TIEG TT YI KLK VK++ +A G+ +GSEL+Y
Sbjct: 124 YIEHLVQRVQQEQPQEIIFALSTTIEGDTTTFYITKKLKEFPVKLSNIARGVAVGSELEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T+ +I+ R
Sbjct: 184 TDEMTLARSIKER 196
>gi|298253201|ref|ZP_06976993.1| recombination protein RecR [Gardnerella vaginalis 5-1]
gi|297532596|gb|EFH71482.1| recombination protein RecR [Gardnerella vaginalis 5-1]
Length = 202
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI+ +++PG GP+ A+R +L+ ++ + L +A+ N+ V C +CGNV
Sbjct: 11 IGHLIEAFSKLPGIGPKGAQRIAFYLLSSSDKDVQELIDAINNMKESVRFCDVCGNVCEQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD S I VVE+ D+ ++ER+ + +YHVLGG+++P+ +GP D+ I
Sbjct: 71 SPCIVCADPRRDHSKICVVEEPKDIMSIERTHEYSGVYHVLGGAINPMANVGPGDLAITQ 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ K++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G +L+Y D+
Sbjct: 131 LLERLKDAKVQEIILALDPDIEGEATVTYLARLLDPLGIKVTRLASGLPVGGDLEYADEI 190
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 191 TLGRAFSGR 199
>gi|308176116|ref|YP_003915522.1| recombination protein recR [Arthrobacter arilaitensis Re117]
gi|307743579|emb|CBT74551.1| recombination protein recR [Arthrobacter arilaitensis Re117]
Length = 270
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H++ + + LA ++ + KV C IC N+
Sbjct: 6 VQELIDELGRLPGIGPKSAQRIAFHILDADAEDMTRLAASIQLVKEKVKFCEICFNISEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D++RD + I +VE+ D+ A+ER++A + YHVLGGS++PL IGPE + I+
Sbjct: 66 EICAICRDERRDGTKICIVEESKDVLAIERTRAFSGKYHVLGGSINPLAGIGPEQLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ I ELI A +EG+ TA Y++ L + + ITRLA G+P+G +L+Y D+
Sbjct: 126 LVTRLADDSITELILATDPNLEGEATAVYLVRALAPLGIHITRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLARAFEGR 194
>gi|306830912|ref|ZP_07464074.1| recombination protein R [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426935|gb|EFM30045.1| recombination protein R [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 200
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 9 IAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDE 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD SVI+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 69 DPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYRGLYHVLHGLISPMNGVGPDDINLKS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 129 LITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 189 TLLRAIENRTEL 200
>gi|237720984|ref|ZP_04551465.1| recombination protein recR [Bacteroides sp. 2_2_4]
gi|229449819|gb|EEO55610.1| recombination protein recR [Bacteroides sp. 2_2_4]
Length = 205
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 ETCQICANPQRDVSTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPSDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|311694774|gb|ADP97647.1| recombination protein RecR [marine bacterium HP15]
Length = 200
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG G ++A+R HL+++ L+EA++ + V C C N T
Sbjct: 7 VDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGTRLSEALSQAMSGVRRCESCQNFADT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QR + VVE +DL A+E++ Y VL G LSP+D +GPE+IGI+
Sbjct: 67 EICGICENPQRRTGTLCVVESPSDLLAIEQAGDYRGGYFVLMGHLSPIDGVGPEEIGIER 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++RI + + ELI A + T+EG+ TAHYI D+L G + ITRLA+GIP+G EL Y+D
Sbjct: 127 LLKRIRDEGVTELILATNPTVEGEATAHYIADRLDGQGILITRLAHGIPVGGELGYVDGF 186
Query: 190 TIFEAIRSRTVL 201
T+ A R R L
Sbjct: 187 TLTHAFRGRKPL 198
>gi|126667420|ref|ZP_01738392.1| recombination protein RecR [Marinobacter sp. ELB17]
gi|126628176|gb|EAZ98801.1| recombination protein RecR [Marinobacter sp. ELB17]
Length = 200
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG G ++A+R HL+++ L +A+ + V C C N T
Sbjct: 7 VDELVESLRVLPGVGQKTAQRMAFHLLERARSGGSRLGDALGRAMDGVRRCDRCQNFADT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + +R+ V+ VVE +DL A+E++ A Y VL G LSP+D IGPE IGI
Sbjct: 67 DVCGICENPERNTGVLCVVESPSDLLAIEQAGDYRAGYFVLMGHLSPIDGIGPEQIGIDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + + ELI A + T+EG+ TAHYI D+L +V ITRLA+GIP+G EL Y+D
Sbjct: 127 LVHRVRDEGVTELILATNPTVEGEATAHYIADRLADNNVLITRLAHGIPVGGELGYVDGF 186
Query: 190 TIFEAIRSRTVL 201
T+ A R R L
Sbjct: 187 TLTHAFRGRKPL 198
>gi|121594689|ref|YP_986585.1| recombination protein RecR [Acidovorax sp. JS42]
gi|171769453|sp|A1W8D4|RECR_ACISJ RecName: Full=Recombination protein recR
gi|120606769|gb|ABM42509.1| recombination protein RecR [Acidovorax sp. JS42]
Length = 196
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 114/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C
Sbjct: 5 SSLDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGAQVLSQALAQAATQVRHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C+D RDA+ + VVE AD A+ER+ A LY VL G LSPLD +GP DIG+
Sbjct: 65 EGAVCETCLDPARDATRLCVVETPADQAAMERTAAFKGLYFVLMGRLSPLDGVGPRDIGV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ER ++E+I A S T EG+ TAH I + LK V +TRLA G+P+GSEL+Y+D
Sbjct: 125 HNLLERASDGVVQEVILATSFTAEGEATAHAIGEALKRRGVHVTRLARGVPVGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALADR 195
>gi|225872190|ref|YP_002753645.1| recombination protein RecR [Acidobacterium capsulatum ATCC 51196]
gi|254790744|sp|C1F111|RECR_ACIC5 RecName: Full=Recombination protein recR
gi|225793113|gb|ACO33203.1| recombination protein RecR [Acidobacterium capsulatum ATCC 51196]
Length = 199
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 121/186 (65%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L ++PG G RSA+R H+++ LA A+ ++ ++ LCS+C N+ DPC
Sbjct: 11 LIEELRKLPGIGTRSAQRLAFHILRSSTADAEALAGAVRDLKAQLRLCSVCNNITDVDPC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C R+ ++ VVE+ ++ A+E+++ N +YHVL G+LSPL +GPE + +L+
Sbjct: 71 VFCSSPTRNQRLVCVVEEPTNIAAVEKTRGYNGVYHVLHGTLSPLHGVGPEHLRTVNLLA 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E ++ ELI A S T+EG+ TA+Y+ D L+ + V++TR+A G+P GS+++Y+D+ T+
Sbjct: 131 RVERGEVDELILATSPTVEGEATANYLADLLRPLRVRLTRIATGVPAGSDIEYVDEVTMT 190
Query: 193 EAIRSR 198
A+ R
Sbjct: 191 RALEGR 196
>gi|222110706|ref|YP_002552970.1| recombination protein recr [Acidovorax ebreus TPSY]
gi|221730150|gb|ACM32970.1| recombination protein RecR [Acidovorax ebreus TPSY]
Length = 196
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 114/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C
Sbjct: 5 SSLDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGAQMLSQALAQAATQVRHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C+D RDA+ + VVE AD A+ER+ A LY VL G LSPLD +GP DIG+
Sbjct: 65 EGAVCETCLDPARDATRLCVVETPADQAAMERTAAFKGLYFVLMGRLSPLDGVGPRDIGV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ER ++E+I A S T EG+ TAH I + LK V +TRLA G+P+GSEL+Y+D
Sbjct: 125 HNLLERASDGVVQEVILATSFTAEGEATAHAIGEALKRRGVHVTRLARGVPVGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALADR 195
>gi|212550851|ref|YP_002309168.1| recombination protein RecR [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549089|dbj|BAG83757.1| recombination protein RecR [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 209
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+EN I A++PG G ++A R H +K+ + + A+ + N++ C +C N+
Sbjct: 9 LENAINEFAKLPGIGRKTALRLVFHSLKRTTKEVENFGRAIIALRNEINYCKVCYNICDN 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD S+I VVE++ ++ A+E +K + LYHVLGG +SP++ IGP D+ I+S
Sbjct: 69 EICDICSNTSRDISLICVVENIKEVMAIENTKQFHGLYHVLGGVISPMEGIGPGDLQIKS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGSELDYLDD 188
LIER++ K+RE+I A+S T+EG TT YI K+ I+ VKI+ LA G+ +G E++Y D+
Sbjct: 129 LIERVKNGKVREIILALSTTMEGDTTNFYIYRKISNINSVKISTLARGVSIGDEIEYTDE 188
Query: 189 GTIFEAIRSR 198
T+ ++I +R
Sbjct: 189 ITLGKSILNR 198
>gi|172045849|sp|Q03ZG8|RECR_LEUMM RecName: Full=Recombination protein recR
Length = 201
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 121/195 (62%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R + + E+ + ++A+ + + CSICGN+ T
Sbjct: 7 IAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSICGNITAT 66
Query: 70 D--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D PC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPEDI +
Sbjct: 67 DTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPEDINL 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ E ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS++DY
Sbjct: 127 PSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSDIDYA 186
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A++ RT L
Sbjct: 187 DELTLIKAVQGRTKL 201
>gi|171778656|ref|ZP_02919752.1| hypothetical protein STRINF_00604 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282613|gb|EDT48037.1| hypothetical protein STRINF_00604 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 198
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ RD SV++VVED D+ A+E+ + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCQICNDQTRDRSVLLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVSEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|154492908|ref|ZP_02032534.1| hypothetical protein PARMER_02547 [Parabacteroides merdae ATCC
43184]
gi|154087213|gb|EDN86258.1| hypothetical protein PARMER_02547 [Parabacteroides merdae ATCC
43184]
Length = 207
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 123/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + L+ +PG G ++A R LH++++ A A+ + V C
Sbjct: 1 MNQKYPSVLLENAVNELSSLPGVGRKTALRLALHMLRRDVGYTEGFASALLALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ D CAIC+D QRD S + VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDDVCAICVDCQRDHSTVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL++R+ +++E++ A+S T+EG TT +I KL DVKI+ +A G+ +G
Sbjct: 121 GPGDLQIDSLVQRVAGGEVKEVVLALSTTMEGDTTNFFIYRKLSSYDVKISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIVNRT 199
>gi|325479550|gb|EGC82646.1| recombination protein RecR [Anaerococcus prevotii ACS-065-V-Col13]
Length = 201
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 119/187 (63%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NLI+ ++P G +SA R + +V + + ++++ + +++ C ICGN+ D
Sbjct: 10 NLIEQFQKLPTIGRKSAERLAMSIVDDDRKKVEDFSKSLLEVKDRIHKCEICGNLTEEDI 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D IGP+++ I L+
Sbjct: 70 CDICKDITRNEEYLCIVEDVRNLIAIEKSNAYRGRYHVLGGLISPSDGIGPDELNIDKLL 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
ERI+ + I+E+I AIS+TIEG+TT ++ L +DVKIT+LA GIP+GS L+Y D T+
Sbjct: 130 ERIKKEDIKEVIIAISSTIEGETTILFLSSILSKLDVKITKLAQGIPVGSNLEYFDQLTL 189
Query: 192 FEAIRSR 198
A+ R
Sbjct: 190 ERALEDR 196
>gi|298208096|ref|YP_003716275.1| recombination protein RecR [Croceibacter atlanticus HTCC2559]
gi|83850737|gb|EAP88605.1| recombination protein RecR [Croceibacter atlanticus HTCC2559]
Length = 205
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 123/194 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E ++ ++++PG G R+A R LHL+K+ E LA+A+ ++ ++ C+ C
Sbjct: 3 FSSKYLEQAVQEVSQLPGIGKRTALRLVLHLLKQPEDQTVSLAKALVDVKTQINFCTNCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC + +R++ + VVED+ D+ A+E + YHVLGG +SP+D +GP
Sbjct: 63 NISDHKLCEICANPKRESQYVCVVEDIRDVMAIENTSQYRGHYHVLGGKISPMDGVGPNQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+++ + K+ E+IFA+S+T+EG TT YI +L+G +K + +A GI +G EL+
Sbjct: 123 LNISTLVDKAKAGKVDEIIFALSSTLEGDTTNFYIFKQLEGTGIKTSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEITLGRSILNR 196
>gi|315223280|ref|ZP_07865141.1| recombination protein RecR [Streptococcus anginosus F0211]
gi|315187712|gb|EFU21466.1| recombination protein RecR [Streptococcus anginosus F0211]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I+VVED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICTDETRDQSTILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|323127674|gb|ADX24971.1| recombination protein RecR [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGKVTEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|251782870|ref|YP_002997173.1| recombination protein RecR [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391500|dbj|BAH81959.1| recombination protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGKVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|53804578|ref|YP_113788.1| recombination protein RecR [Methylococcus capsulatus str. Bath]
gi|73621498|sp|Q609A9|RECR_METCA RecName: Full=Recombination protein recR
gi|53758339|gb|AAU92630.1| recombination protein RecR [Methylococcus capsulatus str. Bath]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L +PG GP++A+R TLHL+++ G L+EA+ KV LC+ C +
Sbjct: 7 IAELIEALRCLPGVGPKTAQRMTLHLLQRDRDAAGRLSEALRQALEKVGLCAQCRTLTEH 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C RD S++ +VE A++ A+ RS L+ VL G LSPLD IGPE++G+
Sbjct: 67 SLCEYCASPGRDRSLLCIVESPAEVLAISRSTGYKGLFFVLNGRLSPLDGIGPEELGLDV 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R++ + ELI A + T+EG+ TAHY+ D + V+ TR+A+GIP G EL+Y+D
Sbjct: 127 LEQRLKDDGVAELILATNTTVEGEATAHYLSDMARRHGVRTTRIAHGIPFGGELEYVDGA 186
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 187 TLSHAFDGR 195
>gi|293373050|ref|ZP_06619419.1| recombination protein RecR [Bacteroides ovatus SD CMC 3f]
gi|292632118|gb|EFF50727.1| recombination protein RecR [Bacteroides ovatus SD CMC 3f]
Length = 205
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + +++PG G ++A R LHL+++ + ++ + +V C +C N+ T
Sbjct: 10 LEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYCKVCHNISDT 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D +GP D+ I+S
Sbjct: 70 ETCQICANPQRDVSTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGVGPSDLQIES 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A+S T+EG TT YI KL + VK++ +A GI +G EL+Y D+
Sbjct: 130 LVQRVAEGGVKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVGDELEYADEV 189
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 190 TLGRSIVNRTLF 201
>gi|88802321|ref|ZP_01117848.1| recombination protein recR [Polaribacter irgensii 23-P]
gi|88781179|gb|EAR12357.1| recombination protein recR [Polaribacter irgensii 23-P]
Length = 205
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 126/194 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++R+PG G R+A R LHL+K+ + L+EA+ ++ N V C C
Sbjct: 3 FSSKLLENAVNEVSRLPGIGKRTALRLVLHLLKQPVEHTKYLSEALLHLRNDVKTCEKCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T C IC + +R+ +++ VVED+ D+ A+E + LYHVLGG +SP++ IGP++
Sbjct: 63 NISDTVLCDICQNPRRNPALVCVVEDIRDVMAIESTSQFKGLYHVLGGKISPIEGIGPQN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ +I +I+ELIFA+S+T+EG TT YI +++ ++ + +A GI +G EL+
Sbjct: 123 LKIDSLVHKIGEGEIKELIFALSSTMEGDTTNFYIFKQIEKFNIITSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSIVNR 196
>gi|300867805|ref|ZP_07112448.1| recombination protein RecR [Oscillatoria sp. PCC 6506]
gi|300334222|emb|CBN57620.1| recombination protein RecR [Oscillatoria sp. PCC 6506]
Length = 197
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG GP++A+R LH++K+ E+ + LA+++ + +V C +C ++
Sbjct: 4 RPLARLIEQLQRLPGIGPKTAQRLALHILKRPEEEIEALAQSLIDAKEQVGFCEVCFHLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + RD+ I VV D D+ A+E+++ YHVLGG +SP+D IGPE + I
Sbjct: 64 ADPVCEICRNPNRDSDTICVVTDSRDVIAIEKTREYIGKYHVLGGVISPMDGIGPEQLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ I+E+I AIS ++EG+TT Y+ +K K+TR+A+G+PMG +L+Y D
Sbjct: 124 EQLVRRVSHDDIKEVIIAISPSVEGETTTLYVGRLVKPF-TKVTRIAFGLPMGGDLEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R +L
Sbjct: 183 EVTLARALEGRRLL 196
>gi|325694086|gb|EGD36004.1| recombination protein R [Streptococcus sanguinis SK150]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|257057602|ref|YP_003135434.1| recombination protein RecR [Saccharomonospora viridis DSM 43017]
gi|256587474|gb|ACU98607.1| DNA replication and repair protein RecR [Saccharomonospora viridis
DSM 43017]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ L L E + + V C +CGNV
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLASDPADLARLQEVLGKVREGVRFCEVCGNVSER 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 ERCRICSDPRRDTSVICVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQLRIKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
L+ RI ++ E+I A EG+ TA Y++ LK + +TRLA G+PMG +L++ D+
Sbjct: 126 LLSRIGADEVSEVIIATDPNTEGEATATYLVRMLKDFPGLTVTRLASGLPMGGDLEFADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 LTLGRALSGRRAL 198
>gi|332362738|gb|EGJ40534.1| recombination protein R [Streptococcus sanguinis SK49]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTILIVEDSQDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|283782640|ref|YP_003373394.1| recombination protein RecR [Gardnerella vaginalis 409-05]
gi|297243103|ref|ZP_06927041.1| recombination protein RecR [Gardnerella vaginalis AMD]
gi|283442128|gb|ADB14594.1| recombination protein RecR [Gardnerella vaginalis 409-05]
gi|296889314|gb|EFH28048.1| recombination protein RecR [Gardnerella vaginalis AMD]
Length = 202
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG GP+ A+R +L+ ++ + L +A+ N+ V C +CGNV
Sbjct: 11 IGRLIEAFSKLPGIGPKGAQRIAFYLLSSSDKDVQELIDAINNMKESVRFCDVCGNVCEQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C D +RD S I VVE+ D+ ++ER+ + +YHVLGG+++P+ +GP D+ I
Sbjct: 71 SPCIVCADPRRDHSKICVVEEPKDIMSIERTHEYSGVYHVLGGAINPMANVGPGDLAITQ 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ K++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G +L+Y D+
Sbjct: 131 LLERLKDAKVQEIILALDPDIEGEATVTYLARLLDPLGIKVTRLASGLPVGGDLEYADEI 190
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 191 TLGRAFSGR 199
>gi|229917434|ref|YP_002886080.1| recombination protein RecR [Exiguobacterium sp. AT1b]
gi|259563696|sp|C4KZX2|RECR_EXISA RecName: Full=Recombination protein recR
gi|229468863|gb|ACQ70635.1| recombination protein RecR [Exiguobacterium sp. AT1b]
Length = 199
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG GP++A R H++ +E + A+++ + + C++CG++
Sbjct: 7 IGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVCGHITDI 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD +V+ VV+D D+ A+E+ + YHVL G++SP++ IGPEDI + S
Sbjct: 67 DPCAICKDSHRDETVVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPEDINVSS 126
Query: 130 LIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ E + I+E+I A + IEG+ T+ Y+ LK +++TRLA+G+P+G +L+Y D+
Sbjct: 127 LLTRLQENESIQEVILATNPNIEGEATSMYLSRLLKPTGIRVTRLAHGLPVGGDLEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLSRAMEGRREL 199
>gi|297170604|gb|ADI21630.1| recombinational DNA repair protein (recF pathway) [uncultured
myxobacterium HF0130_06F04]
Length = 207
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 8/203 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQ--------LLGPLAEAMANIYNK 56
++ IE LI + R+PG G R+A R +L+K+ L LA A+ + ++
Sbjct: 1 MSADPIERLILEMGRLPGIGERTAARLAFYLLKQARDAEARGLSTLARDLALALTEVVDE 60
Query: 57 VCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116
V LCS C N+ +D C+IC D RD ++ VVE+V+DL ALE S A YHVL G+L+P
Sbjct: 61 VRLCSRCQNLCASDLCSICEDTTRDERLLCVVENVSDLRALEASGAYRGTYHVLHGALAP 120
Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176
LD +GP D+ + L +R+ +E+I A++A +EG TA Y+ L DVK++RLA G
Sbjct: 121 LDGVGPADLKLPELADRVVRGGYQEVILAMNADVEGDATALYLARLLGAGDVKLSRLASG 180
Query: 177 IPMGSELDYLDDGTIFEAIRSRT 199
+P+G EL+YLD TI A+ +RT
Sbjct: 181 VPLGGELEYLDQATIGRALTART 203
>gi|15893423|ref|NP_346772.1| recombination protein RecR [Clostridium acetobutylicum ATCC 824]
gi|20139611|sp|Q97MR4|RECR_CLOAB RecName: Full=Recombination protein recR
gi|15022954|gb|AAK78112.1|AE007525_6 Recombination protein (recR) [Clostridium acetobutylicum ATCC 824]
gi|325507535|gb|ADZ19171.1| recombination protein RecR [Clostridium acetobutylicum EA 2018]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R T+H++ ++ + A+A+ + CS+CGN T
Sbjct: 8 IEKLIEEFAKLPGVGYKTAQRLTMHVLNLPKEEVEGFADALKKARGTIKYCSVCGNYTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S++ VVE+ D+ ++E+ + N +YHVL G +SP+ GP+ I ++
Sbjct: 68 DPCAICSNPNRDKSLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ K++E+I A + ++G+ TA YI LK + VK+TR+A+GIP+G +L+Y D+
Sbjct: 128 LVSRMN-GKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAKALEGR 195
>gi|324993373|gb|EGC25293.1| recombination protein R [Streptococcus sanguinis SK405]
gi|325690164|gb|EGD32168.1| recombination protein R [Streptococcus sanguinis SK115]
gi|325697103|gb|EGD38990.1| recombination protein R [Streptococcus sanguinis SK160]
gi|327473368|gb|EGF18788.1| recombination protein R [Streptococcus sanguinis SK408]
gi|327489501|gb|EGF21294.1| recombination protein R [Streptococcus sanguinis SK1058]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGVKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|153006598|ref|YP_001380923.1| recombination protein RecR [Anaeromyxobacter sp. Fw109-5]
gi|171769313|sp|A7HGU3|RECR_ANADF RecName: Full=Recombination protein recR
gi|152030171|gb|ABS27939.1| recombination protein RecR [Anaeromyxobacter sp. Fw109-5]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+K LA++PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 7 IARLVKELAKLPGIGEKTAQRLAFHILKAGPGYAGELAGAIAGVVRDVRLCSECQTLTDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C D +RD+ +I VVE V DL A+ER+ YHVL G+LSPLD IGP ++ I+
Sbjct: 67 DPCAVCADPRRDSRIICVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGIGPSELKIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E + E++ A + +EG+ TA Y+ LK + VK+TR+A GIPMG +L+Y D
Sbjct: 127 LLLRLEREPAEEIVVATNPDVEGEATALYLTKLLKPLGVKVTRIAQGIPMGGDLEYADQV 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLARALAGRREL 198
>gi|152996551|ref|YP_001341386.1| recombination protein RecR [Marinomonas sp. MWYL1]
gi|150837475|gb|ABR71451.1| recombination protein RecR [Marinomonas sp. MWYL1]
Length = 197
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI+ L +PG GPRSA++ L+L+++ Q LA A+ +KV CS C +
Sbjct: 6 IKELIESLRCLPGVGPRSAQKMALYLLERDHQGADRLANALREALDKVGRCSSCRTLTEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RDA + +VE AD+ A+E + + + Y VL G LSP+D IGPE++G+
Sbjct: 66 SECGICTDPERDAKHLCIVETPADVVAIESAGSFSGRYFVLLGHLSPIDGIGPEELGLDR 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ++ ++ E I A ++T+EG+ T HYI +KLK +++ ++R+A+G+PMG EL+Y+D
Sbjct: 126 LEALVQHNEVEEAIIATNSTVEGEATCHYIAEKLKTLNINVSRIAHGVPMGGELEYVDGN 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 TLALALEGRKKL 197
>gi|183602339|ref|ZP_02963706.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682697|ref|YP_002469080.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190273|ref|YP_002967667.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195679|ref|YP_002969234.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|254790752|sp|B8DVK3|RECR_BIFA0 RecName: Full=Recombination protein recR
gi|183218553|gb|EDT89197.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620347|gb|ACL28504.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248665|gb|ACS45605.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250233|gb|ACS47172.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289177990|gb|ADC85236.1| RecR [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793260|gb|ADG32795.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
V9]
Length = 200
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI A +PG GP+ A+R +L++ + L +A+ + KV C +CGNV +
Sbjct: 9 IQRLIDSFASLPGIGPKGAQRIAFYLLQAPDAESQRLVDAINEVKEKVRFCEVCGNVCES 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC IC D +RD I VVE+ D+ ++ER++ LY VLGG+++P+ +GP D+ I
Sbjct: 69 SPCTICSDPRRDHGTICVVEEPKDVMSIERTREYRGLYQVLGGAINPMANVGPSDLNIAQ 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +++E+I A++ IEG+ T Y+ L +D+K+TRLA G+P+G +L+Y D+
Sbjct: 129 LLNRLHDGEVKEIIVALNPNIEGEATTTYLSRLLAPLDIKVTRLASGLPVGGDLEYADEI 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLSRALEGR 197
>gi|328956230|ref|YP_004373563.1| DNA replication and repair protein RecR [Coriobacterium glomerans
PW2]
gi|328456554|gb|AEB07748.1| DNA replication and repair protein RecR [Coriobacterium glomerans
PW2]
Length = 198
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L R+PG GP+SA+R HL++ + LA A+ + +V C+ C N
Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYHLLEADPEQARRLAAAIIQVKTEVHFCARCFNYA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T C+IC D RD + I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + +
Sbjct: 65 TEQECSICSDTSRDRTRICVVSEPRDVSAIERTGSYRGLYHVLGGVISPMDKIGPEQLHV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + I ELI A + IEG+TTA Y+ +K + V ++RLA G+P+G +L+Y D
Sbjct: 125 RELLARLGAEDIEELIIATNPNIEGETTASYLARAIKPLGVCVSRLASGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI +R L
Sbjct: 185 ELTLGRAIEARRSL 198
>gi|229552946|ref|ZP_04441671.1| recombination protein RecR [Lactobacillus rhamnosus LMS2-1]
gi|229313690|gb|EEN79663.1| recombination protein RecR [Lactobacillus rhamnosus LMS2-1]
Length = 199
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG G ++A R + + + + A+++ + CSICGN+
Sbjct: 7 ISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGNITDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ I+S
Sbjct: 67 DPCAICRDKNRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLQGVLSPIEGRGPEDLNIES 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLKRLKKNTAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 187 MTLMKAVEGRTEL 199
>gi|269976048|ref|ZP_06183052.1| recombination protein RecR [Mobiluncus mulieris 28-1]
gi|269935876|gb|EEZ92406.1| recombination protein RecR [Mobiluncus mulieris 28-1]
Length = 201
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L ++PG GP+SA+R +++ + + LA + + + C CGN+
Sbjct: 9 LQNLIDALGKMPGVGPKSAQRIAFWVLQTDPENIKNLAATLQTAKDTIRFCETCGNITEN 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D +RD S+I VVE+ D+ +LE++++ LYHVLGG++ P++ IGP+ + I+S
Sbjct: 69 PVCQICVDPRRDRSLICVVEEAKDIASLEKTRSYRGLYHVLGGAIDPINGIGPDQLRIKS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++E+I A + +EG+ TA Y+ L + + +RLA G+P+GS+L+Y D+
Sbjct: 129 LMERLQDAEVKEVIIATNPNVEGEATATYLSRLLATLQIPASRLASGLPVGSDLEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 189 TLSRALEGRHSL 200
>gi|199599029|ref|ZP_03212436.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus
rhamnosus HN001]
gi|258509259|ref|YP_003172010.1| recombination protein RecR [Lactobacillus rhamnosus GG]
gi|258540443|ref|YP_003174942.1| recombination protein RecR [Lactobacillus rhamnosus Lc 705]
gi|199590065|gb|EDY98164.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus
rhamnosus HN001]
gi|257149186|emb|CAR88159.1| Recombination protein recR [Lactobacillus rhamnosus GG]
gi|257152119|emb|CAR91091.1| Recombination protein recR [Lactobacillus rhamnosus Lc 705]
gi|259650541|dbj|BAI42703.1| recombination protein RecR [Lactobacillus rhamnosus GG]
Length = 199
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG G ++A R + + + + A+++ + CSICGN+
Sbjct: 7 ISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGNITDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ I+S
Sbjct: 67 DPCAICRDKNRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDLNIES 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LLKRLKKNTAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 187 MTLMKAVEGRTEL 199
>gi|228469550|ref|ZP_04054543.1| recombination protein RecR [Porphyromonas uenonis 60-3]
gi|228308900|gb|EEK17575.1| recombination protein RecR [Porphyromonas uenonis 60-3]
Length = 205
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 122/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + + +E + L+ +PG G ++A R LHL+++ L EA+ ++ K+C C
Sbjct: 1 MKDQYPSQWLERAVDQLSLLPGIGRKTAMRMALHLLRQPPSYAQHLGEAIIDLRQKICYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + + C IC D QRD S + VVE V D+ +E++ LYHVLGG +SP+D I
Sbjct: 61 ERCHCISDSPLCDICSDPQRDQSTVCVVEQVKDVLTIEQTHRYKGLYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I+SL ER++ + +RE+I AI +T+EG TT +YI +L+ V ++ +A GI +G
Sbjct: 121 TPNDLEIESLYERVQEEPVREVILAIRSTLEGDTTNYYIYKRLESTGVLVSLIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ AI +RT
Sbjct: 181 DEIEYADEVTLGSAIANRT 199
>gi|298345778|ref|YP_003718465.1| recombination protein RecR [Mobiluncus curtisii ATCC 43063]
gi|304390522|ref|ZP_07372475.1| recombination protein R [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315654367|ref|ZP_07907275.1| recombination protein R [Mobiluncus curtisii ATCC 51333]
gi|315657728|ref|ZP_07910608.1| recombination protein R [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235839|gb|ADI66971.1| recombination protein RecR [Mobiluncus curtisii ATCC 43063]
gi|304326278|gb|EFL93523.1| recombination protein R [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491402|gb|EFU81019.1| recombination protein R [Mobiluncus curtisii ATCC 51333]
gi|315491525|gb|EFU81136.1| recombination protein R [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 200
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 120/199 (60%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+I + +++LI L ++PG GP+SA+R ++ E + L EA+ ++ KV C +
Sbjct: 2 NQIFTEALQDLIDALGKMPGVGPKSAQRIAFWVLSADEADIKRLTEALTSVKEKVHFCEV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+ CAIC D +RD S+I VVE D+ +LER++ LYHVLGG+L P++ IGP
Sbjct: 62 CGNITEHPVCAICQDSRRDQSLICVVEQATDIVSLERTRMYRGLYHVLGGALDPINGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + I L+ R++ I+E+I A EG+ TA Y+ L I + +RLA G+P+G +
Sbjct: 122 DQLRIAGLMTRLQDSAIKEVIIATDPNTEGEATAAYLARMLATIGIPASRLASGLPVGGD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ R L
Sbjct: 182 LEYADEVTLGRALEGRRRL 200
>gi|227484860|ref|ZP_03915176.1| recombination protein RecR [Anaerococcus lactolyticus ATCC 51172]
gi|227237220|gb|EEI87235.1| recombination protein RecR [Anaerococcus lactolyticus ATCC 51172]
Length = 201
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + + NLI+ ++P G +SA R + +V + + + ++++ + ++ C ICG
Sbjct: 3 ILPESLNNLIEQFQKLPTIGRKSAERLAMSIVDEDAKSVEDFSKSLIEVKKRIHHCKICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D RD + +VEDV +L A+E+S A YHVLGG +SP D I P+
Sbjct: 63 NLTEEDTCNICKDFTRDDEYLCIVEDVRNLIAIEKSGAYRGKYHVLGGLISPSDDISPDK 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I LI+R++ + I+E+I AIS+TIEG+TT +I + LKG ++KI+++A GIP+GS L+
Sbjct: 123 LNIDKLIKRLDTEDIKEIILAISSTIEGETTILFITNLLKGRNIKISKIAQGIPVGSHLE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D T+ A+ R
Sbjct: 183 YFDQLTLERALEDR 196
>gi|125717544|ref|YP_001034677.1| recombination protein RecR [Streptococcus sanguinis SK36]
gi|166223508|sp|A3CLS2|RECR_STRSV RecName: Full=Recombination protein recR
gi|125497461|gb|ABN44127.1| Recombinational DNA repair protein (RecF pathway), putative
[Streptococcus sanguinis SK36]
gi|324990633|gb|EGC22569.1| recombination protein R [Streptococcus sanguinis SK353]
gi|325688254|gb|EGD30273.1| recombination protein R [Streptococcus sanguinis SK72]
gi|327458731|gb|EGF05079.1| recombination protein R [Streptococcus sanguinis SK1057]
gi|327461648|gb|EGF07979.1| recombination protein R [Streptococcus sanguinis SK1]
gi|328945545|gb|EGG39696.1| recombination protein R [Streptococcus sanguinis SK1087]
gi|332363452|gb|EGJ41235.1| recombination protein R [Streptococcus sanguinis SK355]
gi|332366051|gb|EGJ43807.1| recombination protein R [Streptococcus sanguinis SK1059]
Length = 198
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|291295538|ref|YP_003506936.1| recombination protein RecR [Meiothermus ruber DSM 1279]
gi|290470497|gb|ADD27916.1| recombination protein RecR [Meiothermus ruber DSM 1279]
Length = 195
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 123/189 (65%), Gaps = 10/189 (5%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKE---QLLGPLAEAMANIYNKVCLCSICGNVDTT 69
L++ LA +PG GP+SA++ L+LV+ + +LL L A A + C +CGN+
Sbjct: 10 LVRALAGLPGVGPKSAQKLGLYLVQNPDASAELLSSLQAAQA-----LHPCPVCGNLAED 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE ++DL A+ERS + LYHVLGG+L+PL+ IGPE + ++
Sbjct: 65 ELCPICADPERDRTVICVVETISDLMAIERSGEYSGLYHVLGGALNPLEGIGPEQLYLEK 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+E + E+I A T+EG+ TA Y+ ++L +++ TRLAYG+P+G L+Y D+
Sbjct: 125 LFARLE--GVNEVILATGMTVEGEATAGYLAERLSQHNIRPTRLAYGLPVGGSLEYADEV 182
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 183 TLARALENR 191
>gi|171058657|ref|YP_001791006.1| recombination protein RecR [Leptothrix cholodnii SP-6]
gi|170776102|gb|ACB34241.1| recombination protein RecR [Leptothrix cholodnii SP-6]
Length = 198
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 116/196 (59%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +G + +L++ L R+PG G +SA+R HL++ + LA A+ KV C
Sbjct: 2 KASSGDALAHLVEALRRLPGVGVKSAQRMAYHLLQHDQPAASQLARALDAAVQKVQHCER 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C CA C+D QRD + VVE AD A+ER+ + LY VL G LSPLD +G
Sbjct: 62 CHTFTEQPVCATCLDPQRDPHQLCVVETPADQAAVERTGSYRGLYFVLMGKLSPLDGVGA 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DIG+ +LIER + ++E+I A + T EG+ TAH I + LK +++TRLA G+P+GSE
Sbjct: 122 HDIGLPALIERAFDEVVQEVIVATNFTAEGEVTAHVIAEALKSRGLRVTRLARGVPIGSE 181
Query: 183 LDYLDDGTIFEAIRSR 198
L+Y+D GTI A R
Sbjct: 182 LEYVDLGTIAHAFSER 197
>gi|227499704|ref|ZP_03929804.1| recombination protein RecR [Anaerococcus tetradius ATCC 35098]
gi|227218171|gb|EEI83434.1| recombination protein RecR [Anaerococcus tetradius ATCC 35098]
Length = 201
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 118/187 (63%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NLI ++P G +SA R + +V + + + A+++ + +++ C ICGN+ D
Sbjct: 10 NLIDEFQKLPTIGRKSAERLAMSIVDRDKDSVDEFAKSLLEVKSRIHSCEICGNLTEEDI 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D IGP+ + + L+
Sbjct: 70 CDICKDITRNEECLCIVEDVKNLIAIEKSHAYRGRYHVLGGLISPSDDIGPDKLNVDKLL 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
ERI+ + I+E+I AIS+TIEG+TT+ ++ L +VKIT+LA GIP+GS L+Y D T+
Sbjct: 130 ERIDKEDIKEVILAISSTIEGETTSLFLTGLLSNKNVKITKLAQGIPVGSNLEYFDQLTL 189
Query: 192 FEAIRSR 198
A+ R
Sbjct: 190 ERALEDR 196
>gi|221194896|ref|ZP_03567952.1| recombination protein RecR [Atopobium rimae ATCC 49626]
gi|221184799|gb|EEE17190.1| recombination protein RecR [Atopobium rimae ATCC 49626]
Length = 203
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 122/192 (63%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ ++ L+ L R+PG GP+SA+R +L++ + L+ A+ + +V C IC N
Sbjct: 9 GRALQRLLDELGRLPGIGPKSAQRIAYYLLEADSEEAQRLSRAILEVKQQVHFCPICFNY 68
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T D C +C+D R+ S I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE +
Sbjct: 69 ATRDECDVCMDASRNRSEICVVSEPRDVSAIERTGVYHGLYHVLGGVISPMDKIGPEQLH 128
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ R+ ++E++ A + +EG+TTA Y+ + + VK++RLA G+P+G +L+Y
Sbjct: 129 VRELLSRLADGTVQEVLLATNPDVEGETTATYLARTIAPLGVKVSRLASGLPVGGDLEYA 188
Query: 187 DDGTIFEAIRSR 198
D+ T+ AI +R
Sbjct: 189 DEVTLGRAIEAR 200
>gi|332686116|ref|YP_004455890.1| recombination protein RecR [Melissococcus plutonius ATCC 35311]
gi|332370125|dbj|BAK21081.1| recombination protein RecR [Melissococcus plutonius ATCC 35311]
Length = 198
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + E+ + A+++ ++ + CS CGN+
Sbjct: 7 IAKLIESYMKLPGIGQKTAIRLAFYTIDMDEEDVTNFAKSLISVKRDLHFCSNCGNITEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D+ RD S I+V+E+ D+ A+E+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DLCDICQDKTRDHSTILVIEEPKDITAMEKMREYHGLYHVLNGVLSPMEGTGPEDINIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R+ +I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIQRLHNDEIKEVILATNATTEGEATAMYLSRFIKPAGIKVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSRTVL 201
T+ +AI R L
Sbjct: 187 TLLKAIEGRREL 198
>gi|116511199|ref|YP_808415.1| DNA replication and repair protein RecR [Lactococcus lactis subsp.
cremoris SK11]
gi|123320630|sp|Q031X9|RECR_LACLS RecName: Full=Recombination protein recR
gi|116106853|gb|ABJ71993.1| DNA replication and repair protein RecR [Lactococcus lactis subsp.
cremoris SK11]
Length = 198
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 125/189 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICGN+ +
Sbjct: 7 IARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICGNLTES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++I ++S
Sbjct: 67 DPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLAHGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 187 TLSKAVENR 195
>gi|332637115|ref|ZP_08415978.1| recombination protein RecR [Weissella cibaria KACC 11862]
Length = 199
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R H + +E+ + A+++ + + CSICGN+ T
Sbjct: 7 IAKLIDSYTKLPGIGIKTATRLAFHTIDMQEEDVTGFAQSLISAKRDLSFCSICGNLTET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PCAIC D RD S ++VVE+V DL A+E + LYHVL G LSPL GP+DI I+S
Sbjct: 67 QPCAICSDPTRDQSQVLVVEEVRDLMAIENTGEYRGLYHVLHGVLSPLSGKGPDDINIES 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + I+E+I A +A EG+ TA Y+ LK + ++RLA G+ +GS++DY D+
Sbjct: 127 LVTRLQKDEDIQEVIVATNANAEGEATAMYLSRLLKPAGLTVSRLATGLSVGSDIDYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 187 ITLIKAVEGRTKL 199
>gi|332361734|gb|EGJ39538.1| recombination protein R [Streptococcus sanguinis SK1056]
Length = 198
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELIYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|241765308|ref|ZP_04763286.1| recombination protein RecR [Acidovorax delafieldii 2AN]
gi|241364989|gb|EER59900.1| recombination protein RecR [Acidovorax delafieldii 2AN]
Length = 196
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 116/191 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L R+PG G +SA+R HL++ LA A+ + V C++C
Sbjct: 5 NSLDVLIQALRRLPGVGIKSAQRMAFHLLQHDRAGAQALARALDDAVGSVRHCALCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD IGP++IG+
Sbjct: 65 QAEVCSTCLDPARDASRLCVVETPADQSALERTGAYKGLYFVLMGRLSPLDGIGPKEIGL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L+ER ++E+I A + EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 QKLMERSTNGVVQEVILATNFNAEGEATAHVIGEALKSRGLHVTRLARGVPVGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALVDR 195
>gi|270291182|ref|ZP_06197405.1| recombination protein RecR [Pediococcus acidilactici 7_4]
gi|304385467|ref|ZP_07367812.1| recombination protein R [Pediococcus acidilactici DSM 20284]
gi|270280578|gb|EFA26413.1| recombination protein RecR [Pediococcus acidilactici 7_4]
gi|304328674|gb|EFL95895.1| recombination protein R [Pediococcus acidilactici DSM 20284]
Length = 199
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + ++ + A+A+ + + CSICGN+
Sbjct: 7 IAKLIDSFMKLPGIGYKTATRLAFFTLDMQKDDVTDFAKALISAQRDLRFCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD ++VVED D+ ++E+ K + LYHVL G LSP+D GPEDI I S
Sbjct: 67 DPCDICQDASRDQKTVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPEDINIAS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++Y D
Sbjct: 127 LLTRLQKNEAIKEVIIATNATPEGEATAMYISRLIKPSGIKVTRLAHGLSVGSDIEYADQ 186
Query: 189 GTIFEAIRSRT 199
T+++A+ RT
Sbjct: 187 MTLYKAVEGRT 197
>gi|300790713|ref|YP_003771004.1| recombination protein RecR [Amycolatopsis mediterranei U32]
gi|299800227|gb|ADJ50602.1| recombination protein RecR [Amycolatopsis mediterranei U32]
Length = 198
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + L + + + V C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLATDPADIARLQDVLGKVKEGVQFCEVCGNVSEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D++RD +VI VVE+ D+ A+ER++ YHVLGG+L PL IGPE + ++
Sbjct: 66 QKCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQLRMRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
L++RI I+E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+
Sbjct: 126 LLKRIGEADIKEIIIATDPNTEGEATATYLVRMLRNFPGLSVTRLASGLPMGGDLEFADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R VL
Sbjct: 186 LTLGRALSGRRVL 198
>gi|325280372|ref|YP_004252914.1| Recombination protein recR [Odoribacter splanchnicus DSM 20712]
gi|324312181|gb|ADY32734.1| Recombination protein recR [Odoribacter splanchnicus DSM 20712]
Length = 203
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
A +PG G ++A + LHL+KK Q + +++ ++ + C C N+ + C IC
Sbjct: 14 FASLPGVGRKTALKFVLHLLKKDVQEVDDFLKSIGDLKKNIKECRRCHNISDGEICEICS 73
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D +RD + + VVE++ D+ ++E + N LYHVLGG +SP+D IGP D+ I SL+ER+E
Sbjct: 74 DPKRDNTTLCVVENIKDILSIEATSQYNGLYHVLGGIISPMDGIGPADLHITSLVERVEQ 133
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTIFEAI 195
+ IRE+IFA+SATIEG TT +YI K+K D+ I+ +A GI +G++L+Y D+ T+ +I
Sbjct: 134 EPIREIIFALSATIEGDTTGYYIFKKMKNKEDLVISTIAKGISIGNDLEYTDELTLGRSI 193
Query: 196 RSR 198
+R
Sbjct: 194 VNR 196
>gi|222053484|ref|YP_002535846.1| recombination protein RecR [Geobacter sp. FRC-32]
gi|254790769|sp|B9LZ13|RECR_GEOSF RecName: Full=Recombination protein recR
gi|221562773|gb|ACM18745.1| recombination protein RecR [Geobacter sp. FRC-32]
Length = 197
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + L+ L ++PG G ++A R HL+K + L LAE++ + V CS+C +
Sbjct: 6 RSLTRLLGELKKLPGVGDKTALRLAFHLLKSPDNLTA-LAESLLEVKAGVRFCSVCFGIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC +C +RD + I VVE+ D+ A+ERS+A YHVL G+LSPL+ I P D+ I
Sbjct: 65 EDDPCHLC-STERDRTTICVVEEPQDILAMERSRAFKGRYHVLHGALSPLNGITPGDLKI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+E IRE++ A + T+EG+ TA Y+ +K + +++TRLA+GIP+GS+L+++D
Sbjct: 124 AELMKRLESGAIREVLIATNFTVEGEATALYLTRLIKPLSIRVTRLAHGIPLGSDLEFID 183
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 184 AATVQRAVEGRSEL 197
>gi|326317364|ref|YP_004235036.1| recombination protein RecR [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374200|gb|ADX46469.1| recombination protein RecR [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 199
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L R+PG G +SA+R HL++ Q L+ A+ + V C+ C
Sbjct: 10 LDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHCARCHTFTEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD IGP+DIG
Sbjct: 70 EVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGIGPKDIGFGK 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER ++E+I A + T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D G
Sbjct: 130 LLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVGSELEYVDLG 189
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 190 TIAHALVDR 198
>gi|322385092|ref|ZP_08058739.1| recombination protein R [Streptococcus cristatus ATCC 51100]
gi|321270716|gb|EFX53629.1| recombination protein R [Streptococcus cristatus ATCC 51100]
Length = 198
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD +VI++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICTDQTRDQTVILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LLTRLMDSQVMEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|120611314|ref|YP_970992.1| recombination protein RecR [Acidovorax citrulli AAC00-1]
gi|171769180|sp|A1TQI0|RECR_ACIAC RecName: Full=Recombination protein recR
gi|120589778|gb|ABM33218.1| recombination protein RecR [Acidovorax citrulli AAC00-1]
Length = 199
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L R+PG G +SA+R HL++ Q L+ A+ + V C+ C
Sbjct: 10 LDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHCARCHTFTEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD IGP+DIG
Sbjct: 70 EVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGIGPKDIGFGK 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER ++E+I A + T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D G
Sbjct: 130 LLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVGSELEYVDLG 189
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 190 TIAHALVDR 198
>gi|310657424|ref|YP_003935145.1| gap repair protein [Clostridium sticklandii DSM 519]
gi|308824202|emb|CBH20240.1| gap repair protein [Clostridium sticklandii]
Length = 200
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ A++PG G ++A+R H++ + + LA A+ N + CS C N+
Sbjct: 8 ISRLIEEFAKLPGVGRKTAQRLAFHVINMDKDQVKALAHAIVEAKNNITYCSTCCNIADK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+PC+IC R + +I VVED D+ A+ER+K + YHVL G++SP+D I P+ + I+
Sbjct: 68 NPCSICDSPNRTSDIICVVEDPRDVAAMERTKEFHGKYHVLHGTISPMDSITPDMLKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +++E+I A + TIEG+ TA YI +K ++K+TR+A+G+P+G++++Y D+
Sbjct: 128 LVGRMANPELKEVILATNPTIEGEATAMYIARLIKPFNIKVTRIAHGLPVGADIEYADEV 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TITKALEGR 196
>gi|322412134|gb|EFY03042.1| recombination protein RecR [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 198
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGKVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|319938751|ref|ZP_08013115.1| recombination protein recR [Streptococcus anginosus 1_2_62CV]
gi|319811801|gb|EFW08067.1| recombination protein recR [Streptococcus anginosus 1_2_62CV]
Length = 198
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+PCAIC D+ RD S I+VVED D+ A+E + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 NPCAICTDETRDQSTILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGIGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|88856403|ref|ZP_01131061.1| recombination protein RecR [marine actinobacterium PHSC20C1]
gi|88814270|gb|EAR24134.1| recombination protein RecR [marine actinobacterium PHSC20C1]
Length = 199
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LAE + +I +KV C+ICGNV
Sbjct: 6 VQELIDELGRLPGIGPKSAQRIAFHILQTESFDVRRLAELLNDIRDKVHFCAICGNVTEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +R + I VVE+ D+ A+ER++ + LYHVLGG++SP+D IGP+ + I+
Sbjct: 66 ETCSICRDPRRSPASICVVEEAKDVVAIERTREFSGLYHVLGGAISPIDGIGPDQLRIKQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A +EG+ TA Y+ L +++I+RLA G+P+G +L+Y D+
Sbjct: 126 LLGRLADGVVTEVIIATDPNLEGEATATYLTRLLVQPNLRISRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|116493220|ref|YP_804955.1| recombination protein RecR [Pediococcus pentosaceus ATCC 25745]
gi|122265316|sp|Q03E59|RECR_PEDPA RecName: Full=Recombination protein recR
gi|116103370|gb|ABJ68513.1| DNA replication and repair protein RecR [Pediococcus pentosaceus
ATCC 25745]
Length = 199
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + ++ + A+A+ + + CSICGN+
Sbjct: 7 IAKLIDSFMKLPGIGYKTATRLAFFTLDMEKDDVTEFAKALISAQRDLSFCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD ++VVED D+ ++E+ K + LYHVL G LSP+D GPEDI I +
Sbjct: 67 DPCDICQDPSRDQKAVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPEDINIAA 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++Y D
Sbjct: 127 LLTRLQKNEAIKEVIIATNATPEGEATAMYISRLVKPSGIKVTRLAHGLSVGSDIEYADQ 186
Query: 189 GTIFEAIRSRT 199
T+++A+ RT
Sbjct: 187 MTLYKAVEGRT 197
>gi|121997039|ref|YP_001001826.1| recombination protein RecR [Halorhodospira halophila SL1]
gi|171769498|sp|A1WTL2|RECR_HALHL RecName: Full=Recombination protein recR
gi|121588444|gb|ABM61024.1| recombination protein RecR [Halorhodospira halophila SL1]
Length = 201
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L R+PG G ++A+R LHL+++ LA+A+ + V C CG +
Sbjct: 8 LRELVEGLRRLPGVGAKTAQRMALHLLQRDRDGARQLADALQRAVDGVGHCPECGLLTEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C QR +++ VVE AD++ALE++ LY VLGG+LSPLD IGPE++G+
Sbjct: 68 ERCGLCASPQRRRTLLCVVESSADVFALEQATDFQGLYFVLGGALSPLDGIGPEELGLDR 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+E ++ E+I A + TIEG+ TAHY+ V+ TR+A+G+PMG L+ +D G
Sbjct: 128 LQQRLEAGEVEEIILATNPTIEGEATAHYVQSLAAERGVRTTRIAHGVPMGGALEQVDQG 187
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 188 TLSHAFMGR 196
>gi|326203228|ref|ZP_08193093.1| recombination protein RecR [Clostridium papyrosolvens DSM 2782]
gi|325986486|gb|EGD47317.1| recombination protein RecR [Clostridium papyrosolvens DSM 2782]
Length = 199
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ ++PG G +SA+R H++ + + L+E++ K CS+C N+
Sbjct: 8 VAKLVEEFQKLPGIGHKSAQRLAFHVINMPMEKVQKLSESILEAKQKTRYCSVCSNLTDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C RD +VI VV+D D+ A+ER++ LYHVL G++SP+ IGPE+I I+
Sbjct: 68 DPCPLCSGTSRDKTVICVVQDPRDVVAMERTREFKGLYHVLHGAISPMQGIGPEEIRIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A + +EG+ TA YI +K + VK TR+A+GIP+G +L+Y D+
Sbjct: 128 LIARLGSGEVTEVILATNPNVEGEATAMYISKLIKPLGVKATRIAHGIPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLAKALEGR 196
>gi|220927702|ref|YP_002504611.1| recombination protein RecR [Clostridium cellulolyticum H10]
gi|254790761|sp|B8I551|RECR_CLOCE RecName: Full=Recombination protein recR
gi|219998030|gb|ACL74631.1| recombination protein RecR [Clostridium cellulolyticum H10]
Length = 199
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L++ ++PG G +SA+R H++ + + L+E++ K CS+C N+
Sbjct: 8 IAKLVEEFQKLPGIGHKSAQRLAFHVINLPMEKVQKLSESILEAKQKTRYCSVCSNLTDI 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C RD +VI VV+D D+ A+ER++ LYHVL G++SP+ IGPE+I I+
Sbjct: 68 DPCPLCSGTSRDKTVICVVQDPRDVVAMERTREFKGLYHVLHGAISPMQGIGPEEIRIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A + +EG+ TA YI +K + VK TR+A+GIP+G +L+Y D+
Sbjct: 128 LITRLGSGDVKEVILATNPNVEGEATAMYISKLIKPLGVKATRIAHGIPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLAKALEGR 196
>gi|78224610|ref|YP_386357.1| recombination protein RecR [Geobacter metallireducens GS-15]
gi|123570728|sp|Q39Q42|RECR_GEOMG RecName: Full=Recombination protein recR
gi|78195865|gb|ABB33632.1| DNA replication and repair protein RecR [Geobacter metallireducens
GS-15]
Length = 197
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L+ L ++PG G ++A R HL+K E LAE++ + ++V CS+C
Sbjct: 4 SSNSFARLLAELQKLPGVGEKTALRLAFHLLKYPENT-AALAESLGEVLSRVKFCSVCFG 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC +C RD + + VVE+ DL A+ER++A YHVL G+LSPL+ + P+ +
Sbjct: 63 ITEEDPCRLC-SSDRDETSLCVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+E +RE++ A + ++EG+TTA Y+ ++K + +++TRLA+GIP+GS+L+Y
Sbjct: 122 RIAELMRRLEEGTVREVVIATNFSVEGETTALYLARQIKPLGIRVTRLAHGIPLGSDLEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 VDAATVQRALEGRSEL 197
>gi|28209847|ref|NP_780791.1| recombination protein RecR [Clostridium tetani E88]
gi|73621479|sp|Q899U3|RECR_CLOTE RecName: Full=Recombination protein recR
gi|28202282|gb|AAO34728.1| recombination protein recR [Clostridium tetani E88]
Length = 198
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ A++PG G ++A+R TL+++ + + A A+ + CS+CGN
Sbjct: 8 IEKLIEEFAKLPGIGKKTAQRLTLYVLNLPREEVEEFANALIKARGTIKYCSVCGNFTDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD + I VVE D+ +E+ + N +YHVL G++SP+ GP DI ++
Sbjct: 68 DPCAICSNPNRDKNTICVVEHPKDIMTMEKVREYNGMYHVLHGTISPMAGRGPNDIKLKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI +I+E+I A + +EG+ TA YI LK + K+TR+A+GIP+G +L+Y D+
Sbjct: 128 LISRIN-GEIKEVIVATNPNVEGEATAMYISKILKPLGAKVTRIAHGIPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAKALEGR 195
>gi|262283027|ref|ZP_06060794.1| recombination protein recR [Streptococcus sp. 2_1_36FAA]
gi|262261279|gb|EEY79978.1| recombination protein recR [Streptococcus sp. 2_1_36FAA]
Length = 198
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 DPCAICRDESRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|256370923|ref|YP_003108747.1| recombination protein RecR [Acidimicrobium ferrooxidans DSM 10331]
gi|256007507|gb|ACU53074.1| recombination protein RecR [Acidimicrobium ferrooxidans DSM 10331]
Length = 205
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L R+PG GP+SA+R L L+ + LA+ + ++ C CG +
Sbjct: 8 LDALIEELGRLPGIGPKSAQRIALALIVRGPAAAHRLADVLVTATERLGRCDRCGALAEG 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D RD +++VVE D+WA ER++ YHVLGG +SP+D +GP+D+ I
Sbjct: 68 ARCPICDDPARDPRIVLVVEGDRDVWAFERARRFRGTYHVLGGVISPMDGVGPDDLAIGR 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+E + I E++ A S T+EG+TTA Y+ L G V ++RLA G+P+G EL+Y+D+
Sbjct: 128 LIARVEAEPIEEVVVATSPTVEGETTATYLARVLAG-RVGVSRLATGVPVGGELEYVDEL 186
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 187 TLARALEGR 195
>gi|241895202|ref|ZP_04782498.1| recombination protein RecR [Weissella paramesenteroides ATCC 33313]
gi|241871508|gb|EER75259.1| recombination protein RecR [Weissella paramesenteroides ATCC 33313]
Length = 199
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + E+ + A+++ + + CSICGN+ T
Sbjct: 7 IAKLIDSYTKLPGIGIKTATRLAFYTIDMPEEEVTSFAQSLISAKRDLQFCSICGNLTET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VV +V DL A+E + LYHVL G LSPL+ GP+DI I+S
Sbjct: 67 DPCVICSDKNRDQSQVLVVAEVKDLMAIENTGEYRGLYHVLHGVLSPLEGKGPDDINIES 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + I+E+I A +A EG+ TA Y+ LK +K++RLA G+ +GS++DY D
Sbjct: 127 LVNRLQKDETIQEVIVATNANAEGEATAMYLSRLLKPAGLKVSRLATGLSVGSDIDYADQ 186
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ RT L
Sbjct: 187 ITLIKAVEGRTQL 199
>gi|268318941|ref|YP_003292597.1| Recombination protein recR [Lactobacillus johnsonii FI9785]
gi|262397316|emb|CAX66330.1| Recombination protein recR [Lactobacillus johnsonii FI9785]
Length = 199
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDQNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|313159174|gb|EFR58547.1| recombination protein RecR [Alistipes sp. HGB5]
Length = 198
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +++++ L+++PG G R+A R +H+++ + + + + E++ N V C+ C N+
Sbjct: 3 KLLQDVVGELSKLPGVGRRTALRLAIHILRMERESVAEMTESIDRFRNDVKYCAECNNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC+D +RD + I VVE VAD+ ++E + LYHVLGG +SP+ I P D+ I
Sbjct: 63 DEEVCPICLDDERDRTTICVVEQVADVLSIENTHQYKGLYHVLGGVISPMQGISPSDLKI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYL 186
L ERI ++E+I AIS ++EG+TT Y+M++L+ VK+T +A GI G EL+Y+
Sbjct: 123 DLLTERIARGGVKEVILAISTSVEGETTLFYLMNRLRQFPGVKVTSIARGIGFGDELEYV 182
Query: 187 DDGTIFEAIRSR 198
D+ TI A+R+R
Sbjct: 183 DELTITHALRNR 194
>gi|226226520|ref|YP_002760626.1| recombination protein RecR [Gemmatimonas aurantiaca T-27]
gi|226089711|dbj|BAH38156.1| recombination protein RecR [Gemmatimonas aurantiaca T-27]
Length = 199
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L LAR+PG G ++A R T HL+++ LA+A+ + +V C C N+ +
Sbjct: 4 IDELTNELARLPGIGRKTALRLTYHLLRQPASQCRNLADALVALTERVRSCERCHNLTES 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RDA+ + VVE +D+ ++ER+ LYHVLGG LSPLD +GP+D+ +
Sbjct: 64 TLCHLCADPRRDAATLCVVEQASDIASIERAGEFRGLYHVLGGRLSPLDGVGPDDLHVAD 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI----DVKITRLAYGIPMGSELDY 185
L+ R+E + +RE+I A + ++EG+ TA Y+ +L G +++TR+A G+P+G +L+Y
Sbjct: 124 LLARLEAEGVREVILATNPSLEGEATALYVQRQLAGSASSHAIRVTRIARGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSR 198
D TI +AI +R
Sbjct: 184 ADGVTIAQAIAAR 196
>gi|313902765|ref|ZP_07836162.1| DNA replication and repair protein RecR [Thermaerobacter
subterraneus DSM 13965]
gi|313466885|gb|EFR62402.1| DNA replication and repair protein RecR [Thermaerobacter
subterraneus DSM 13965]
Length = 199
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI L ++PG GP++A+R HL+ + ++ + LAEAM V CS+C N+ DP
Sbjct: 9 RLIAELEKLPGIGPKTAQRLAYHLLFRPQEEVRALAEAMVQARASVRYCSVCANLTDRDP 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD VI VVE D+ A+ER++ YHVL G +SP+D +GPE + ++ L+
Sbjct: 69 CPVCRDPGRDPRVICVVEQPRDVVAMERTREFRGRYHVLHGVISPMDGVGPEQLRVRELL 128
Query: 132 ERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
R+ + + E+I A + T+EG+ TA Y+ +K + +++TR+A G+P G +L+Y+D+ T
Sbjct: 129 ARLRQDPPVEEVILATNPTVEGEATALYLARLIKPLGIRVTRIARGVPEGGDLEYVDELT 188
Query: 191 IFEAIRSRTVL 201
+ A++ R L
Sbjct: 189 LTRALQGRQAL 199
>gi|324995314|gb|EGC27226.1| recombination protein R [Streptococcus sanguinis SK678]
gi|327468993|gb|EGF14465.1| recombination protein R [Streptococcus sanguinis SK330]
Length = 198
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC DQ RD S +++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICQDQSRDQSTLLIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|295133092|ref|YP_003583768.1| recombination protein RecR [Zunongwangia profunda SM-A87]
gi|294981107|gb|ADF51572.1| recombination protein RecR [Zunongwangia profunda SM-A87]
Length = 205
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E + ++++PG G R+A R LHL+++ E L +A++ + ++ C C
Sbjct: 3 FSSKLLEQAVDQMSQLPGIGKRTALRLVLHLLRQPETQTEQLTKALSKLRAEIKRCRNCY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C IC + R ++ +VEDV D+ A+E + +YHVLGG +SP+D IGP
Sbjct: 63 NISDTELCDICANPSRQEDLVCIVEDVRDVMAIENTGQYRGMYHVLGGKISPMDGIGPSQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ LIE++ KI+E+IFA+S+T+EG TT YI +L+G VK + +A GI +G EL+
Sbjct: 123 LTIKPLIEKVRDGKIQEIIFALSSTMEGDTTNFYIYKQLEGSGVKTSTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSITNR 196
>gi|323340132|ref|ZP_08080396.1| recombination protein R [Lactobacillus ruminis ATCC 25644]
gi|323092323|gb|EFZ34931.1| recombination protein R [Lactobacillus ruminis ATCC 25644]
Length = 199
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 120/190 (63%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG G ++A R + ++ + ++A+ + + + CS+CGN+ +
Sbjct: 7 IAKLIDSYMRLPGIGEKTAVRLAFFTIDMDKEDVSEFSKALVSAKSDLHYCSLCGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ R+ +IVVE V D+ A E+ + + LYHVL G LSP + IGPEDI ++
Sbjct: 67 DPCVICADKTRNQHQVIVVEQVKDVMAFEKLRDYHGLYHVLHGVLSPSEGIGPEDINVKG 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +I+E+I A +AT EG+ TA YI +K +K TRLA+G+ +GS+++Y D+
Sbjct: 127 LIRRLQANPEIKEVILATNATPEGEATAMYISRLIKPAGIKTTRLAHGLAVGSDIEYADE 186
Query: 189 GTIFEAIRSR 198
T+F+A+ R
Sbjct: 187 MTLFKAVEGR 196
>gi|146319007|ref|YP_001198719.1| recombination protein RecR [Streptococcus suis 05ZYH33]
gi|253752074|ref|YP_003025215.1| recombination protein RecR [Streptococcus suis SC84]
gi|253753899|ref|YP_003027040.1| recombination protein RecR [Streptococcus suis P1/7]
gi|253755226|ref|YP_003028366.1| recombination protein RecR [Streptococcus suis BM407]
gi|166223509|sp|A4VW30|RECR_STRSY RecName: Full=Recombination protein recR
gi|145689813|gb|ABP90319.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus
suis 05ZYH33]
gi|251816363|emb|CAZ51994.1| recombination protein RecR [Streptococcus suis SC84]
gi|251817690|emb|CAZ55438.1| recombination protein RecR [Streptococcus suis BM407]
gi|251820145|emb|CAR46477.1| recombination protein RecR [Streptococcus suis P1/7]
gi|292558657|gb|ADE31658.1| RecR protein [Streptococcus suis GZ1]
gi|319758440|gb|ADV70382.1| recombination protein RecR [Streptococcus suis JS14]
Length = 198
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ ++ A+ + + CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICGNLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+DI +++
Sbjct: 67 DPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDDINLKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LLTRLMENEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|224368755|ref|YP_002602916.1| recombination protein RecR [Desulfobacterium autotrophicum HRM2]
gi|259563692|sp|C0QAG9|RECR_DESAH RecName: Full=Recombination protein recR
gi|223691471|gb|ACN14754.1| RecR [Desulfobacterium autotrophicum HRM2]
Length = 199
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 114/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ I NLIK L+ +PG G R+A R LH++ LA + + KV LC C ++
Sbjct: 6 ESILNLIKSLSTLPGIGRRTAERLALHILHAPLHEAQTLANDILELKQKVTLCRTCFSLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + +RDAS+I VVE D+ A+E+S A + LYHVLGG+LSP+D IGP+++ I
Sbjct: 66 DQPECRICSNPRRDASIICVVEKPTDIVAIEKSGAFSGLYHVLGGALSPMDGIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L R K E+I A +EG+ TA YI D+L+ V +TR+A G+PMG + Y+D
Sbjct: 126 RELFSRACSKTTTEVIIATGTNVEGEATAAYISDQLRKKGVNVTRIASGVPMGGDFQYVD 185
Query: 188 DGTIFEAIRSR 198
T+ A+ R
Sbjct: 186 QVTMQRAMEGR 196
>gi|302530932|ref|ZP_07283274.1| recombination protein RecR [Streptomyces sp. AA4]
gi|302439827|gb|EFL11643.1| recombination protein RecR [Streptomyces sp. AA4]
Length = 198
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + L + + + V C ICGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQDVLGKVKEGVQFCEICGNVSEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D++RD +VI VVE+ D+ A+ER++ YHVLGG+L PL IGPE + ++
Sbjct: 66 ETCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQLRMRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
L++RI ++E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+
Sbjct: 126 LLQRIGEADVKEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDLEFADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 LTLGRALSGRRAL 198
>gi|313764792|gb|EFS36156.1| recombination protein RecR [Propionibacterium acnes HL013PA1]
gi|313815377|gb|EFS53091.1| recombination protein RecR [Propionibacterium acnes HL059PA1]
gi|314916441|gb|EFS80272.1| recombination protein RecR [Propionibacterium acnes HL005PA4]
gi|314917282|gb|EFS81113.1| recombination protein RecR [Propionibacterium acnes HL050PA1]
gi|314921657|gb|EFS85488.1| recombination protein RecR [Propionibacterium acnes HL050PA3]
gi|314930697|gb|EFS94528.1| recombination protein RecR [Propionibacterium acnes HL067PA1]
gi|314955186|gb|EFS99591.1| recombination protein RecR [Propionibacterium acnes HL027PA1]
gi|314959379|gb|EFT03481.1| recombination protein RecR [Propionibacterium acnes HL002PA1]
gi|315099546|gb|EFT71522.1| recombination protein RecR [Propionibacterium acnes HL059PA2]
gi|315102224|gb|EFT74200.1| recombination protein RecR [Propionibacterium acnes HL046PA1]
gi|327454473|gb|EGF01128.1| recombination protein RecR [Propionibacterium acnes HL087PA3]
gi|327456542|gb|EGF03197.1| recombination protein RecR [Propionibacterium acnes HL083PA2]
gi|328756236|gb|EGF69852.1| recombination protein RecR [Propionibacterium acnes HL087PA1]
gi|328759441|gb|EGF73057.1| recombination protein RecR [Propionibacterium acnes HL025PA2]
Length = 201
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP+ A+R H++ E+ LA+A+ + K C IC NV +
Sbjct: 6 LQELIDALSRLPGIGPKGAQRIAFHILDAPEEEANELADALREVKEKAKFCKICFNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D+ I+
Sbjct: 66 EVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPADLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 126 LCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|227888767|ref|ZP_04006572.1| recombination protein RecR [Lactobacillus johnsonii ATCC 33200]
gi|227850604|gb|EEJ60690.1| recombination protein RecR [Lactobacillus johnsonii ATCC 33200]
Length = 199
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLIQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC DQ RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDQNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +I+E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEIKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|325285404|ref|YP_004261194.1| Recombination protein recR [Cellulophaga lytica DSM 7489]
gi|324320858|gb|ADY28323.1| Recombination protein recR [Cellulophaga lytica DSM 7489]
Length = 206
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 125/194 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++++PG G R+A R LHL+K+ + L+ ++ + ++ CS C
Sbjct: 3 FSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPKDQTSALSNSLLKLREEIKFCSNCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC + +RD S++ VVED+ D+ A+E + LYHVLGG +SP++ +GP++
Sbjct: 63 NISDVVLCEICANPKRDESIVCVVEDIRDVMAIENTGQYRGLYHVLGGRISPMEGVGPQN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ + + I+ELIFA+S+T+EG TT YI +++G+ +K + +A GI +G EL+
Sbjct: 123 LTIDSLVNKSKEGIIKELIFALSSTMEGDTTNFYIYKQIEGMGLKTSTIARGIAVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I +R
Sbjct: 183 YADEVTLGRSILNR 196
>gi|319763143|ref|YP_004127080.1| recombination protein recr [Alicycliphilus denitrificans BC]
gi|330825206|ref|YP_004388509.1| recombination protein RecR [Alicycliphilus denitrificans K601]
gi|317117704|gb|ADV00193.1| recombination protein RecR [Alicycliphilus denitrificans BC]
gi|329310578|gb|AEB84993.1| recombination protein RecR [Alicycliphilus denitrificans K601]
Length = 196
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C
Sbjct: 7 LDALIQALRRLPGVGVKSAQRMAFHLLQHDRGGAQQLSQALARACEQVRHCERCHTFTEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C+D RDA+ + VVE AD ALER+ A LY VL G LSPLD +GP DIG+
Sbjct: 67 AVCDTCLDPARDATRLCVVETPADQSALERTAAFKGLYFVLMGRLSPLDGVGPRDIGVHK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER ++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D G
Sbjct: 127 LLERAGDGVVQEVILATSFTAEGEATAHAIAEALKRRGIHVTRLARGVPVGSELEYVDLG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIAHALADR 195
>gi|254421279|ref|ZP_05034997.1| recombination protein RecR [Synechococcus sp. PCC 7335]
gi|196188768|gb|EDX83732.1| recombination protein RecR [Synechococcus sp. PCC 7335]
Length = 190
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ R+PG GP+SA+R +H++K+ E + LA A+ + N+V CS C ++ C
Sbjct: 1 MIEEFQRLPGIGPKSAQRLAMHMLKRPEAEVRALANALIDAKNQVGQCSQCFHLSAEPVC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC Q RD + I VV + D+ ALE+++ YHVLGG +SP+D IGPE + + L+
Sbjct: 61 NICRSQSRDRNTICVVAESKDVIALEKTREYKGRYHVLGGLISPMDGIGPEQLNVGQLVH 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + I E I AIS +IEG TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 121 RVNREGISEAILAISPSIEGDTTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLA 179
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 180 RALEGRREL 188
>gi|157151011|ref|YP_001450727.1| recombination protein RecR [Streptococcus gordonii str. Challis
substr. CH1]
gi|189029380|sp|A8AY67|RECR_STRGC RecName: Full=Recombination protein recR
gi|157075805|gb|ABV10488.1| recombination protein RecR [Streptococcus gordonii str. Challis
substr. CH1]
Length = 198
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D+ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCAICRDESRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLIRAIENRTEL 198
>gi|259502693|ref|ZP_05745595.1| recombination protein R [Lactobacillus antri DSM 16041]
gi|259169338|gb|EEW53833.1| recombination protein R [Lactobacillus antri DSM 16041]
Length = 199
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++PG G ++A R + + +E + A+++ + + CSICGN+
Sbjct: 7 LAKLIESYTKLPGIGQKTATRLAFYTLGMQEDDVTNFAKSLLSAKRDLHSCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE D+ ALER + LYHVL G +SP+ GPEDI I S
Sbjct: 67 DPCPICRDKTRDQSQILVVEQSQDIMALERMHEYHGLYHVLNGVISPVAGTGPEDINIAS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + ++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++DY D+
Sbjct: 127 LLKRLQKNEAVKEVIIATNASSDGELTAGYLAKLIKPAQIKVTRLAHGLSVGADIDYADE 186
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 187 MTLFKAVQGRT 197
>gi|325846731|ref|ZP_08169646.1| recombination protein RecR [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481489|gb|EGC84530.1| recombination protein RecR [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 199
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 122/186 (65%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ ++P G +SA R + +V K ++ + ++A+ + +K+ C ICGN+ + C
Sbjct: 11 LIEQFQKLPTIGKKSAERLAMSIVGKDDESVEDFSKALLEVKSKIHPCKICGNLTEDEIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D R+ ++I V+EDV +L+A+E+S + YH+LGG +SP D + ED+ I L++
Sbjct: 71 GICKDVSREENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKAEDLSIDKLLD 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI+ + I+E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS L+Y D T+
Sbjct: 131 RIDKENIKEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSNLEYFDQLTLE 190
Query: 193 EAIRSR 198
A+ R
Sbjct: 191 RALEDR 196
>gi|258645513|ref|ZP_05732982.1| recombination protein RecR [Dialister invisus DSM 15470]
gi|260402867|gb|EEW96414.1| recombination protein RecR [Dialister invisus DSM 15470]
Length = 196
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 120/192 (62%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++E + + ++PG G ++ARR ++++ ++ + + + +K+C CSIC N+
Sbjct: 2 NSDLELVAEQFRKLPGIGVKTARRLAYFMLERPKEDIDAFINVIHSARDKICYCSICCNL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T+DPC IC D +RD+SVI VVE D+ ALE+S + LYHVL G LSPLD IGPE +
Sbjct: 62 ATSDPCEICGDNRRDSSVICVVEHPQDVQALEQSHEYHGLYHVLHGVLSPLDGIGPEQLK 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ R+ ++E+I A EG+ TA+Y+ +K + V++TR+A G+P G ++ Y
Sbjct: 122 IKELLNRLADDTVKEVIIATDPNTEGEATAYYLSRLIKPLSVRVTRIARGLPAGGDVGYA 181
Query: 187 DDGTIFEAIRSR 198
D T+ A+ +R
Sbjct: 182 DSMTLAGAVENR 193
>gi|261855384|ref|YP_003262667.1| recombination protein RecR [Halothiobacillus neapolitanus c2]
gi|261835853|gb|ACX95620.1| recombination protein RecR [Halothiobacillus neapolitanus c2]
Length = 197
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 110/186 (59%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ L +P G ++A+R L L++ + LA A+ + C C T C
Sbjct: 9 LVQALRGLPSVGQKTAQRMALQLLEHDREGAAQLARAIVAALEGIGRCESCRIFSETPVC 68
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+C D RDA+ + +VE D A+E+S A LY +L G LSPLD IGPEDIGI L+
Sbjct: 69 PVCADNHRDATQLCIVESPTDWLAIEQSGAYQGLYFILSGHLSPLDGIGPEDIGIPELMN 128
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + E+I A SATIEG+ TA YIMD++ K+TRLA G+PMG EL+YLD T+
Sbjct: 129 RLANSPVEEIIMATSATIEGEATAGYIMDRVDPARYKVTRLAQGVPMGGELEYLDAQTLS 188
Query: 193 EAIRSR 198
A++SR
Sbjct: 189 LALKSR 194
>gi|124003953|ref|ZP_01688800.1| recombination protein RecR [Microscilla marina ATCC 23134]
gi|123990532|gb|EAY30012.1| recombination protein RecR [Microscilla marina ATCC 23134]
Length = 200
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 121/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K IE+ + +A +PG G ++A R HL+K+ E+ L + + + + C+ C
Sbjct: 3 FSSKLIEDAVDQIAGLPGIGKKTALRLVFHLLKQDEKSTVALTDTLLKLRRDIVYCNQCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ T C IC +RD +++ VVED D+ A+E + LYHVLGG +SP++ + P D
Sbjct: 63 HISDTPTCNICNSNKRDRTLLCVVEDSQDVLAIENTAQYQGLYHVLGGVISPMEGVSPID 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ER+ +I+E+IFA+S T+EG TT Y+ KL+ +KI+ +A G+P+GSEL+
Sbjct: 123 LHITSLLERVAKSEIKEVIFALSPTMEGDTTTFYLTKKLREHQIKISTIARGVPIGSELE 182
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ +I RT
Sbjct: 183 YTDEITLGRSIIGRTT 198
>gi|149375205|ref|ZP_01892977.1| recombination protein RecR [Marinobacter algicola DG893]
gi|149360569|gb|EDM49021.1| recombination protein RecR [Marinobacter algicola DG893]
Length = 200
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG G ++A+R HL+++ L++A+ V C C N T
Sbjct: 7 VDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGSRLSDALDRAMTGVRRCESCQNFADT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + +R + VVE +DL A+E++ Y VL G LSP+D +GPE+IGI+
Sbjct: 67 PTCNICENPERRTGTLCVVESPSDLLAIEQAGDYRGSYFVLMGHLSPIDGVGPEEIGIER 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++RI + + ELI A + T+EG+ TAHYI D+L G D+ ITRLA+GIP+G EL Y+D
Sbjct: 127 LLKRIHGEGVTELILATNPTVEGEATAHYIADRLDGRDILITRLAHGIPVGGELGYVDGF 186
Query: 190 TIFEAIRSRTVL 201
T+ A R R L
Sbjct: 187 TLTHAFRGRKPL 198
>gi|257454438|ref|ZP_05619700.1| recombination protein RecR [Enhydrobacter aerosaccus SK60]
gi|257448204|gb|EEV23185.1| recombination protein RecR [Enhydrobacter aerosaccus SK60]
Length = 202
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ + L+K L +PG GP+SA+R LHL+ K L EA+ + + C +C +
Sbjct: 5 KFDELVKQLKVLPGVGPKSAQRMALHLLSYKRPQGQALGEALIVAMHDIKQCQVCRGLSD 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC D +R+ V+ +VE AD+ A+E++ N Y VLGG LSP+D IG E +GI
Sbjct: 65 EDICPICSDPRRNERVLCIVETAADMMAIEQTAGFNGKYFVLGGHLSPIDGIGVEQLGIN 124
Query: 129 SLIERIEVKK-----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
LI ++ + + E+I A S T+EGQTTAH+I + +K I+R+A GIPMG EL
Sbjct: 125 QLIGLLKQHQAAQTPVEEIILATSTTVEGQTTAHFISEAVKPYVTHISRIAQGIPMGGEL 184
Query: 184 DYLDDGTIFEAIRSR 198
+YLD T+ +A+++R
Sbjct: 185 EYLDSMTLGQALQNR 199
>gi|297572177|ref|YP_003697951.1| recombination protein RecR [Arcanobacterium haemolyticum DSM 20595]
gi|296932524|gb|ADH93332.1| recombination protein RecR [Arcanobacterium haemolyticum DSM 20595]
Length = 208
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL++ + + L EA+ + KV C++CGN+
Sbjct: 9 VQSLIDELGRLPGVGPKSAQRIAFHLLEADDDEVNHLVEALQAVKAKVQFCTVCGNIAEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +R S I VVE+ D+ A+ERS+ YHVLGG++ P+ +GP+++ I+
Sbjct: 69 DLCRICADLRRVESTICVVEEAKDIVAIERSREYRGKYHVLGGAIDPIGGVGPDNLRIRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R++ + E+I A+ +EG+ TA Y+ L + V ++RLA G+P+G +L+Y D+
Sbjct: 129 LYARLQDGTVEEVILAMDPNVEGEATATYLAINLAHMGVVVSRLASGLPVGGDLEYADEV 188
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 189 TISRALEGR 197
>gi|302035665|ref|YP_003795987.1| recombination protein recR [Candidatus Nitrospira defluvii]
gi|300603729|emb|CBK40060.1| Recombination protein recR [Candidatus Nitrospira defluvii]
Length = 200
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L R+PG G +SA+R HL+K + + LAEA+ + + + C C N+
Sbjct: 9 LAKLVRELVRLPGIGQKSAQRLAFHLLKAEREDAMRLAEAIQAVKDGLSFCRQCRNIAEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S I+V+E+ + L+A+ER+ LYHVL G LSPLD +GP DI +
Sbjct: 69 ELCEFCRDPKRDRSKILVIEEPSTLYAIERAGGYRGLYHVLLGVLSPLDGVGPSDIRAEE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + E+I A + TIEG+ TA Y+ LK V++TR+AYGIP+G +++Y D+
Sbjct: 129 LLDRVKAGGVEEVIVATNPTIEGEATAIYLTRLLKPHHVRVTRIAYGIPVGMDIEYADEV 188
Query: 190 TIFEAIRSR 198
T+ ++I R
Sbjct: 189 TLVKSIEGR 197
>gi|304315583|ref|YP_003850728.1| recombination protein RecR [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777085|gb|ADL67644.1| recombination protein RecR [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 199
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 119/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI L+R+PG G ++A+R +++ + + L+ A+ N + C+ C
Sbjct: 2 NVYSRSLSRLIDELSRLPGIGRKTAQRLAFYILDMPKDDVINLSNAILEAKNNLKYCNKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N +D C IC D+ RD+S I VV D D+ A+E+++ LYHVL G +SP+D IGPE
Sbjct: 62 YNFTDSDLCNICSDETRDSSTICVVSDPKDVVAMEKTREYRGLYHVLHGVISPMDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ERI I+E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLERINNNDIKEIILATNPDIEGEATAMYIAKLIKPFGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D T+ A+ R
Sbjct: 182 EYTDSVTLSRALEGR 196
>gi|223932692|ref|ZP_03624691.1| recombination protein RecR [Streptococcus suis 89/1591]
gi|302023962|ref|ZP_07249173.1| recombination protein RecR [Streptococcus suis 05HAS68]
gi|330832451|ref|YP_004401276.1| recombination protein RecR [Streptococcus suis ST3]
gi|223898662|gb|EEF65024.1| recombination protein RecR [Streptococcus suis 89/1591]
gi|329306674|gb|AEB81090.1| recombination protein RecR [Streptococcus suis ST3]
Length = 198
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ ++ A+ + + CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICGNLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+DI +++
Sbjct: 67 DPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDDINLKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LLTRLMDNEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|310826416|ref|YP_003958773.1| recombination protein RecR [Eubacterium limosum KIST612]
gi|308738150|gb|ADO35810.1| recombination protein RecR [Eubacterium limosum KIST612]
Length = 199
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 122/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K IE L+ L ++PG G ++A+R HL+ + + L+ A+ N+ +K+ LC C ++
Sbjct: 6 KAIERLVTELGKLPGIGEKTAQRLAFHLIDAPAEEIEGLSNALLNVKDKIRLCPECFSIT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C +C D R+ VI VV+ D++A+E+++ N LYHVL G +SPL+ IGP+DI
Sbjct: 66 DGDRCDVCADPNRNRRVICVVQSTKDIFAIEKTREYNGLYHVLHGVISPLEGIGPQDIKA 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ RI I E+I A + T EG+ TA Y+ + + + VK+TRLA GIP+G++++Y+D
Sbjct: 126 KELLLRIGENDIEEVIMATNPTPEGEATAMYLGNLISPLGVKVTRLAKGIPIGADVEYID 185
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +A R +
Sbjct: 186 EITLIKAFEGRNTI 199
>gi|302336634|ref|YP_003801840.1| recombination protein RecR [Spirochaeta smaragdinae DSM 11293]
gi|301633819|gb|ADK79246.1| recombination protein RecR [Spirochaeta smaragdinae DSM 11293]
Length = 195
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++E LI+ L+R+PG G +SA R +L+K + LAE + + ++ C +CGN
Sbjct: 2 NQLERLIRSLSRLPGVGRKSAARIAHYLLKADSAFVTRLAEEIGTLKERIHPCPVCGNFT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C++C D +RD + I VVE+ D+ +E + N L+HVLGG+++P++ +GP D+ I
Sbjct: 62 EDELCSVCSDPRRDGTQICVVEEPQDVATIESTGEYNGLFHVLGGAINPMNGVGPSDLSI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R ++E+I A + T+EG TTA Y+ + LK ++++RLA G+P+G +L+Y D
Sbjct: 122 DKLVKRASEGTVKEIIIATNPTVEGDTTALYLQNILKERPIEVSRLASGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ + R RT L
Sbjct: 182 KLTLARSFRGRTKL 195
>gi|317120923|ref|YP_004100926.1| DNA replication and repair protein RecR [Thermaerobacter
marianensis DSM 12885]
gi|315590903|gb|ADU50199.1| DNA replication and repair protein RecR [Thermaerobacter
marianensis DSM 12885]
Length = 199
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI L ++PG GP++A+R HL+ + + + LAEAM V CSIC N+ DP
Sbjct: 9 RLIAELEKLPGIGPKTAQRLAYHLLFRPQDEVRALAEAMVQARASVRYCSICFNLTDRDP 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RDA VI VVE D+ A+ER++ YHVL G +SP+D IGPE + ++ L+
Sbjct: 69 CPVCRDPGRDARVICVVEQPRDVVAMERTREFRGRYHVLHGVISPMDGIGPEQLRVRELL 128
Query: 132 ERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
R+ + + E+I A + T+EG+ TA Y+ +K + +++TR+A G+P G +L+Y+D+ T
Sbjct: 129 ARLRQDPPVDEVILATNPTVEGEATALYLARLIKPLGIRVTRIARGVPEGGDLEYVDELT 188
Query: 191 IFEAIRSRTVL 201
+ A++ R L
Sbjct: 189 LTRALQGRQAL 199
>gi|322372540|ref|ZP_08047076.1| recombination protein RecR [Streptococcus sp. C150]
gi|321277582|gb|EFX54651.1| recombination protein RecR [Streptococcus sp. C150]
Length = 198
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 7 IAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD + I+VVED D+ A+E+ + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 DPCNICTDETRDRTKILVVEDSKDVSAMEKIQEYHGLYHVLQGLISPMNGIGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVEEVIIATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|126662227|ref|ZP_01733226.1| recombination protein RecR [Flavobacteria bacterium BAL38]
gi|126625606|gb|EAZ96295.1| recombination protein RecR [Flavobacteria bacterium BAL38]
Length = 205
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 121/195 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ K +EN + ++++PG G R+A R LHL+K+ L A+A++ N + C C
Sbjct: 2 ELPSKLLENAVNEMSQLPGIGKRTALRLVLHLLKQPVDQTQGLTAALASMRNDIQYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC + RD ++I VVEDV D+ A+E + +YHVLGG +SP++ IGP
Sbjct: 62 HTISDFDICGICSNLSRDKTIICVVEDVRDVMAIENTGMFKGVYHVLGGKISPIEGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I SL+E+++ + E+IFA+S+T+EG TT YI ++K VK + +A GI +G EL
Sbjct: 122 QLKINSLVEKVKNNAVSEIIFALSSTMEGDTTNFYIYKQIKDFAVKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ ++ +R
Sbjct: 182 EYADEVTLGRSLLNR 196
>gi|146298126|ref|YP_001192717.1| recombination protein RecR [Flavobacterium johnsoniae UW101]
gi|189029362|sp|A5FN24|RECR_FLAJO RecName: Full=Recombination protein recR
gi|146152544|gb|ABQ03398.1| recombination protein RecR [Flavobacterium johnsoniae UW101]
Length = 206
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 122/195 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K IE + ++++PG G R+A R LHL+K+ ++ G L++A+ N+ + C C
Sbjct: 2 EFSSKLIEKAVNEMSQLPGIGKRTALRLVLHLLKQPKEQTGFLSQALLNMREDIKFCENC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T C IC + R+ I VVED+ D+ A+E + +YHVLGG +SP++ +GP
Sbjct: 62 HNISDTKVCEICANSVRNHQTICVVEDIRDVMAIENTGQYKGIYHVLGGKISPIEGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I SL+E+++ K+ E+IFA+S+T+EG TT YI ++ ++ I+ +A GI +G EL
Sbjct: 122 QLNISSLVEKVKSGKVVEIIFALSSTMEGDTTNFYIYKQIAESEIIISTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I R
Sbjct: 182 EYADEITLGRSILHR 196
>gi|312869737|ref|ZP_07729884.1| recombination protein RecR [Lactobacillus oris PB013-T2-3]
gi|311094786|gb|EFQ53083.1| recombination protein RecR [Lactobacillus oris PB013-T2-3]
Length = 199
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 124/191 (64%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++PG G ++A R + + +E + A+++ + + CSICGN+
Sbjct: 7 LAKLIESYTKLPGIGQKTATRLAFYTLGMQEDDVTNFAKSLLSAKRDLHSCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE D+ ALER + LYHVL G +SP+ GPEDI I S
Sbjct: 67 DPCPICRDKTRDQSQILVVEQSQDIMALERMHEYHGLYHVLHGVISPVAGTGPEDINIAS 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ ++++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++DY D+
Sbjct: 127 LLKRLQKNEEVKEVIIATNASSDGELTAGYLAKLIKPAQIKVTRLAHGLSVGADIDYADE 186
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 187 MTLFKAVQGRT 197
>gi|218261719|ref|ZP_03476454.1| hypothetical protein PRABACTJOHN_02122 [Parabacteroides johnsonii
DSM 18315]
gi|218223826|gb|EEC96476.1| hypothetical protein PRABACTJOHN_02122 [Parabacteroides johnsonii
DSM 18315]
Length = 207
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 123/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + L+ +PG G ++A R LH++++ A A+ + V C
Sbjct: 1 MNQKYPSVLLENAVNELSSLPGVGRKTALRLALHMLRRDVGYTEGFASALLALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C+IC D QRD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDNMCSICADHQRDHSMVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL++R+ +++E++ A+S T+EG TT +I KL DVKI+ +A G+ +G
Sbjct: 121 GPGDLQIDSLVQRVAEGEVKEVVLALSTTMEGDTTNFFIYRKLSSYDVKISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIVNRT 199
>gi|116326907|ref|YP_796627.1| recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116332431|ref|YP_802149.1| recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|122279843|sp|Q04NX9|RECR_LEPBJ RecName: Full=Recombination protein recR
gi|122285243|sp|Q056Q1|RECR_LEPBL RecName: Full=Recombination protein recR
gi|116119651|gb|ABJ77694.1| Recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116126120|gb|ABJ77391.1| Recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 197
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E ++ L+ +PG G +SA R + HL++ ++ + N NK+ C CG+ T
Sbjct: 6 LEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC ++RD VVE D++ +E ++ + YHVL G +SPL+ IGP+D+ I+
Sbjct: 66 EICNICTSEKRDTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRIKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ERIE ++I+E++ A + T+EG TA Y+ +LK + V +TR+AYGI +G ++ D
Sbjct: 126 LLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIELADQY 185
Query: 190 TIFEAIRSRTVL 201
T+ AIRSR L
Sbjct: 186 TLGRAIRSRLQL 197
>gi|257066285|ref|YP_003152541.1| recombination protein RecR [Anaerococcus prevotii DSM 20548]
gi|256798165|gb|ACV28820.1| recombination protein RecR [Anaerococcus prevotii DSM 20548]
Length = 201
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI+ ++P G +SA R + +V+ + + ++++ + +++ C ICGN+
Sbjct: 8 LQNLIEQFQKLPTIGRKSAERLAMAIVESDYKSVDDFSKSLTEVKDRIHACKICGNLTED 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D +GP+ + I
Sbjct: 68 EVCDICKDITRNEEYLCIVEDVRNLIAIEKSHAYRGKYHVLGGLISPSDGLGPDQLNIDK 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ERIE + I E+I AIS+TIEG+TT ++ + L ++KIT+LA GIP+GS L+Y D
Sbjct: 128 LLERIEKENIEEVILAISSTIEGETTVLFLTNLLSERNIKITKLAQGIPVGSNLEYFDQL 187
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 188 TLERALEDR 196
>gi|328956612|ref|YP_004373998.1| recombination protein RecR [Carnobacterium sp. 17-4]
gi|328672936|gb|AEB28982.1| recombination protein RecR [Carnobacterium sp. 17-4]
Length = 198
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ ++PG G ++A R + +E+ + A+++ + + CS CG +
Sbjct: 7 ISKLMDSYMKLPGIGAKTAARLAFFTIDMREEDVTDFAKSLISAKRDLHYCSNCGQITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVED D+ ALE+ + + LYHVL G LSP++ GPEDI I S
Sbjct: 67 DPCQICQDKSRDRSTVLVVEDPKDVMALEKMREYHGLYHVLHGVLSPIEGTGPEDINIPS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ +I E+I A +A+ EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLQSDEINEVIIATNASAEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADEI 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLLKAVEGRREL 198
>gi|125623229|ref|YP_001031712.1| recombination protein recR [Lactococcus lactis subsp. cremoris
MG1363]
gi|166221946|sp|A2RI71|RECR_LACLM RecName: Full=Recombination protein recR
gi|124492037|emb|CAL96964.1| Recombination protein recR [Lactococcus lactis subsp. cremoris
MG1363]
gi|300069980|gb|ADJ59380.1| recombination protein RecR [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 198
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICGN+ +
Sbjct: 7 IARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICGNLTES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++I ++S
Sbjct: 67 DPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 187 TLSKAVENR 195
>gi|220932909|ref|YP_002509817.1| recombination protein RecR [Halothermothrix orenii H 168]
gi|254790771|sp|B8CZX0|RECR_HALOH RecName: Full=Recombination protein recR
gi|219994219|gb|ACL70822.1| recombination protein RecR [Halothermothrix orenii H 168]
Length = 198
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L+R+PG GP++A+R ++++ + L+++M + K CS+C N+ DPC
Sbjct: 11 LINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSVCNNLTEKDPC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C +RD ++I VVE D+ A+ER+ LYHVL GS+SP+D IGPEDI I++L+
Sbjct: 71 DFCSSPERDHNLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGPEDIKIRNLLP 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + ++E+I A EG TA Y+ +K + VK+TR+A+G+P+G +L+Y D+ T+
Sbjct: 131 RLK-EGVKEVIVATDPNAEGDATAMYLARLIKPLGVKVTRIAHGLPVGGDLEYADEVTLS 189
Query: 193 EAIRSR 198
+A+ R
Sbjct: 190 KALEGR 195
>gi|269955080|ref|YP_003324869.1| recombination protein RecR [Xylanimonas cellulosilytica DSM 15894]
gi|269303761|gb|ACZ29311.1| recombination protein RecR [Xylanimonas cellulosilytica DSM 15894]
Length = 202
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + LA+A+ + +V C +CGNV
Sbjct: 9 VQDLIDELGRLPGVGPKSAQRIAFHLLAADAGDVRRLADALIEVKARVRFCEVCGNVAEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C+D +R VI VVE+ D+ A+ER++ YHVLGG+++P++ +GP+D+ I+
Sbjct: 69 ERCRVCVDPRRSDDVICVVEEPKDVVAIERTREFRGRYHVLGGAINPIENVGPDDLRIKD 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +++E+I A +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 129 LLSRLADGRVQEVILATDPNVEGEATATYLARLIGPMGVTVSRLASGLPVGGDLEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 189 TLGRAFEGRRVV 200
>gi|15672322|ref|NP_266496.1| RecM [Lactococcus lactis subsp. lactis Il1403]
gi|281490887|ref|YP_003352867.1| recombination protein Recr [Lactococcus lactis subsp. lactis KF147]
gi|20139706|sp|Q9CIL6|RECR_LACLA RecName: Full=Recombination protein recR
gi|12723208|gb|AAK04438.1|AE006271_1 RecM protein [Lactococcus lactis subsp. lactis Il1403]
gi|281374645|gb|ADA64165.1| Recombination protein recR [Lactococcus lactis subsp. lactis KF147]
gi|326405919|gb|ADZ62990.1| recombination protein RecR [Lactococcus lactis subsp. lactis CV56]
Length = 198
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 124/189 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICGN+ +
Sbjct: 7 IARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++I +++
Sbjct: 67 DPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDIEYADEI 186
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 187 TLSKAVENR 195
>gi|320529758|ref|ZP_08030836.1| recombination protein RecR [Selenomonas artemidis F0399]
gi|320137997|gb|EFW29901.1| recombination protein RecR [Selenomonas artemidis F0399]
Length = 198
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ +PG G ++A R H++ + LA A+ K+ CS C N+ T
Sbjct: 7 LTQLMEQFRALPGIGAKTAARLAYHVLDMDMERAQRLASAIVEAKRKIGFCSTCFNLTDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC ++RD SV+ VVE D+ A+ER + +YHVL G+LSPL+ +GP D+ I+
Sbjct: 67 DPCAICTAEKRDHSVVCVVEQPPDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDLRIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 127 LVTRVGTTDVQEVIMATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 187 TLSRAMENR 195
>gi|159900439|ref|YP_001546686.1| recombination protein RecR [Herpetosiphon aurantiacus ATCC 23779]
gi|229890153|sp|A9AUX0|RECR_HERA2 RecName: Full=Recombination protein recR
gi|159893478|gb|ABX06558.1| recombination protein RecR [Herpetosiphon aurantiacus ATCC 23779]
Length = 204
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 119/194 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
IT + + LI R+PG GP+SA R +L++ K + LA A+ + + C+ C
Sbjct: 8 ITPEPVAKLIDEFNRLPGIGPKSASRLVFYLLRAKREQSERLANAIMAMKDSTIFCNRCF 67
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC + R+ + VVE+ D+ ALER+ LYHVL G++SP++ I PED
Sbjct: 68 NITVEDPCTICTNANRNERQVCVVEEPLDVVALERTGEFKGLYHVLHGAISPVEGINPED 127
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ V+ I E+I + + +EG TA Y+ ++ + +++TRLA G+PMGS+L+
Sbjct: 128 LRIRELLARLRVEPIEEVILSTNPNLEGDATAAYLAREIIPLGIRVTRLARGLPMGSDLE 187
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A++ R
Sbjct: 188 YADEVTLGRALQGR 201
>gi|297624594|ref|YP_003706028.1| recombination protein RecR [Truepera radiovictrix DSM 17093]
gi|297165774|gb|ADI15485.1| recombination protein RecR [Truepera radiovictrix DSM 17093]
Length = 196
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 120/192 (62%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L R+PG GP+SA+R +L + E+ + LAEA+ N + C C N+
Sbjct: 7 LTQLIRELGRLPGIGPKSAQRLAFYLFNQPEEDVKSLAEALLNAKGNLRQCERCFNITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C++C D R+ +I VVE ADL A+ERS + LYHVL G+LSP++ +GP+ + IQ
Sbjct: 67 EVCSVCRDPGREQGLICVVEAPADLLAIERSGEYSGLYHVLHGALSPMNGVGPDQLTIQP 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +RE+I A + T+EG+ TA Y+ L + V +R+AYG+P+G +L+Y D+
Sbjct: 127 LLARL--GGVREVILATATTVEGEATAMYLARLLGELKVPTSRIAYGLPVGGDLEYADEV 184
Query: 190 TIFEAIRSRTVL 201
T+ AI +R L
Sbjct: 185 TLGRAISNRRPL 196
>gi|325680621|ref|ZP_08160163.1| recombination protein RecR [Ruminococcus albus 8]
gi|324107691|gb|EGC01965.1| recombination protein RecR [Ruminococcus albus 8]
Length = 200
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 117/187 (62%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A++PG G +SA+R H+++ LA+A+ N++ V LC C N C
Sbjct: 12 LTEQFAKLPGIGMKSAQRIAYHVMEMNADEAKALADAVMNVHKTVHLCKYCQNYTDRHVC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD S++ VV+ D+ A+ER+ +YHVL G +SPL+ I P+D+ I+ L+
Sbjct: 72 PICDDNRRDHSLVCVVQSPQDITAIERTNEYKGVYHVLHGLISPLNGISPDDLKIKELLA 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI I E+I A + T++G TA+YI LK + VK+TRLA+G+P+G +L+Y D+ T++
Sbjct: 132 RINAGGIDEIIMATNPTVDGDATAYYISKLLKPLGVKVTRLAFGLPIGGQLEYADEITLY 191
Query: 193 EAIRSRT 199
+A+ +R
Sbjct: 192 KALENRN 198
>gi|221067922|ref|ZP_03544027.1| recombination protein RecR [Comamonas testosteroni KF-1]
gi|220712945|gb|EED68313.1| recombination protein RecR [Comamonas testosteroni KF-1]
Length = 196
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 119/191 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C
Sbjct: 5 QSLDALIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D RD + + VVE ADL A+ER++A Y+VL G LSPLD +GP++IG+
Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTEAYQGYYYVLMGRLSPLDGVGPKEIGM 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER ++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAISEALKSRGILVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALVDR 195
>gi|89900252|ref|YP_522723.1| recombination protein RecR [Rhodoferax ferrireducens T118]
gi|122479542|sp|Q21YG1|RECR_RHOFD RecName: Full=Recombination protein recR
gi|89344989|gb|ABD69192.1| recombination protein RecR [Rhodoferax ferrireducens T118]
Length = 196
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 117/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L R+PG G +SA R HL++ L+ A+ +++ C C
Sbjct: 5 NSLDVLIQALRRLPGVGVKSASRMAFHLLQHDRPGALALSRALQVAADQMRHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D CA C+D +RDAS + VVE AD ALER+ A + LY VL G LSPLD IGP+DIG+
Sbjct: 65 QADICATCLDPRRDASKLCVVETPADQSALERTGAYHGLYFVLMGKLSPLDGIGPKDIGL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L +R ++E+I A + T EG+ TAH I + LK +++TRLA G+P+GSEL+Y+D
Sbjct: 125 KGLFDRACDGTVQEVILATNFTAEGEATAHVISEGLKSRGLRLTRLARGVPVGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALLDR 195
>gi|212696575|ref|ZP_03304703.1| hypothetical protein ANHYDRO_01113 [Anaerococcus hydrogenalis DSM
7454]
gi|212676431|gb|EEB36038.1| hypothetical protein ANHYDRO_01113 [Anaerococcus hydrogenalis DSM
7454]
Length = 199
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 120/186 (64%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ ++P G +SA R + +V K ++ + ++A+ + +K+ C ICGN+ + C
Sbjct: 11 LIEQFQKLPTIGKKSAERLAMSIVGKDDESVEEFSKALMEVKSKIHPCKICGNLTEDEIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D R ++I V+EDV +L+A+E+S + YH+LGG +SP D + ED+ I L++
Sbjct: 71 GICKDVSRQENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKAEDLSIDKLLD 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI+ + I E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS L+Y D T+
Sbjct: 131 RIDKENINEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSNLEYFDQLTLE 190
Query: 193 EAIRSR 198
A+ R
Sbjct: 191 RALEDR 196
>gi|289209014|ref|YP_003461080.1| recombination protein RecR [Thioalkalivibrio sp. K90mix]
gi|288944645|gb|ADC72344.1| recombination protein RecR [Thioalkalivibrio sp. K90mix]
Length = 196
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 114/190 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E++ L++ L +PG G +SARR LHL+++ LA A+ +V C +C + T
Sbjct: 4 ELDELVQALRCLPGVGAKSARRMALHLLERDRDGARRLARAVDQAVERVGHCQVCRTLTT 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C+ C D +RD VI VVE D+ A+E + +HVL G LSPLD IGPE++G+
Sbjct: 64 AEVCSRCADPERDPGVICVVESPGDVMAIESATDFTGRFHVLLGRLSPLDGIGPEELGLD 123
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ +RELI A + ++EG+ TAHY+ + ++ TR+A GIP G EL+Y+D
Sbjct: 124 RLEARLQEDSVRELILATNTSVEGEVTAHYLAEMAARHGIRATRIAQGIPTGGELEYIDA 183
Query: 189 GTIFEAIRSR 198
GT+ A+ R
Sbjct: 184 GTLAHALSGR 193
>gi|317970378|ref|ZP_07971768.1| DNA replication and repair protein RecR [Synechococcus sp. CB0205]
Length = 228
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI R+PG GPR+A+R LHL+ + + + A+A+ ++V C C ++
Sbjct: 35 RPLARLIDQFERLPGIGPRTAQRLALHLLNQPSEQIQAFADALLAARSQVGQCQRCFHLS 94
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC +++R V+ VV D DL ALER++ YHVLGG +SP+D IGPE + I
Sbjct: 95 ADPLCEICRNEERSTGVLCVVADSRDLLALERTREFKGSYHVLGGLISPMDGIGPELLHI 154
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L+ER++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D
Sbjct: 155 QPLVERVDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYAD 213
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 214 EVTLARALEGR 224
>gi|291543055|emb|CBL16165.1| recombination protein RecR [Ruminococcus bromii L2-63]
Length = 200
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 118/190 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ R+PG G ++A+R +++ + LA A+ + + K+ CS C N+
Sbjct: 9 LENLVEQFERMPGIGNKTAQRLAYYVLNLSKTEAEQLAGAVMDAHTKIHYCSKCCNLTDK 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C +C + RD SVI VVE D A+E + +YHVL GS+SPL+ IGP+++ I+
Sbjct: 69 DLCPVCANPTRDHSVICVVETPRDATAIENTHEFKGVYHVLHGSISPLNDIGPDNLTIKE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + + E+I A + T+EG TA YI LK + VK+TRLAYGIP+G +L+Y D+
Sbjct: 129 LLARLNEESVEEVIMATNPTVEGDATALYISKLLKPLGVKVTRLAYGIPVGGDLEYADEY 188
Query: 190 TIFEAIRSRT 199
T+ +A+ R
Sbjct: 189 TLAKALEGRN 198
>gi|91788141|ref|YP_549093.1| recombination protein RecR [Polaromonas sp. JS666]
gi|122967827|sp|Q12B97|RECR_POLSJ RecName: Full=Recombination protein recR
gi|91697366|gb|ABE44195.1| DNA replication and repair protein RecR [Polaromonas sp. JS666]
Length = 208
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 118/201 (58%), Gaps = 12/201 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L + L ++PG G +SA R HL++ + +A A+ + N V C++C +
Sbjct: 7 LEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLCNTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CA C + QRD S + VVE AD ALER+ A LY VL G LSPLD IGP DIG+Q
Sbjct: 67 EVCATCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPNDIGLQK 126
Query: 130 LIERI------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
L +R+ ++++E+I A + T EG+ TAH I LK V++TRLA G+
Sbjct: 127 LFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQVTRLARGV 186
Query: 178 PMGSELDYLDDGTIFEAIRSR 198
P+GSEL+Y+D GTI A+ R
Sbjct: 187 PVGSELEYVDLGTIAHALVDR 207
>gi|332666194|ref|YP_004448982.1| Recombination protein recR [Haliscomenobacter hydrossis DSM 1100]
gi|332335008|gb|AEE52109.1| Recombination protein recR [Haliscomenobacter hydrossis DSM 1100]
Length = 203
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 120/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E+ + A +PG G ++A R LHLV ++ + +A+ + ++ C +C
Sbjct: 2 NFSSKLLEDAVNAFASLPGIGKKTALRLVLHLVNREVDTVDQFGDAIVKMRREIKSCKVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC D +RD V+ VVE++ D+ A+E + LYHVLGG +SPL+ +GP
Sbjct: 62 HNLSDEELCMICRDARRDHQVVCVVENIRDVMAIEDTGQYRGLYHVLGGVISPLEGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL++RI +++E++ AIS TIEG+TT YI +LK + V I+ +A G+ G EL
Sbjct: 122 ELTIDSLVQRITNNEVKEIVMAISPTIEGETTIFYISKRLKDLHVNISTIARGVSFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADELTLGRSIVAR 196
>gi|326795604|ref|YP_004313424.1| recombination protein recR [Marinomonas mediterranea MMB-1]
gi|326546368|gb|ADZ91588.1| Recombination protein recR [Marinomonas mediterranea MMB-1]
Length = 197
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L++ L +PG GP+SA++ L+L+++ Q LA A+ + +KV C+ C +
Sbjct: 6 IKELMESLRCLPGVGPKSAQKMALYLLERDSQGADRLANALRDALDKVGRCATCRTLTED 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC+DQ RD + + +VE AD+ A+E + + + Y VL G LSP+D IGPE++G+
Sbjct: 66 TECSICLDQARDGTRLCIVETPADVIAMENAGSFDGRYFVLLGHLSPIDGIGPEELGLDR 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + + E+I A ++TIEG+ T+HYI + LK ++++++RLA G+PMG EL+Y+D
Sbjct: 126 LENLVRNTDVEEVIIATNSTIEGEATSHYISELLKPLNIELSRLAQGVPMGGELEYVDGN 185
Query: 190 TIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 186 TLALALKGRKKL 197
>gi|119485345|ref|ZP_01619673.1| recombination protein RecR [Lyngbya sp. PCC 8106]
gi|119457101|gb|EAW38227.1| recombination protein RecR [Lyngbya sp. PCC 8106]
Length = 189
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ L R+PG GP++A+R ++++K+ E + LA+A+ + +V LC +C ++ C
Sbjct: 1 MIEQLQRLPGVGPKTAQRLAMYIIKRSETEVEALAQALLDAKKQVGLCKVCFHLSAEPIC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC QRD I VV D D+ A+E+++ YHVLGG +SP+D IGPE + I+ L+
Sbjct: 61 DICRHPQRDNETICVVSDSRDVIAIEKTREYRGKYHVLGGVISPMDGIGPEQLTIEPLVR 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ +++E+I AIS ++EG+TT Y+ +K ++TR+A+G+PMG +L+Y D+ T+
Sbjct: 121 RVSQNQVKEVIIAISPSVEGETTTLYLGQLIKPF-TRVTRIAFGLPMGGDLEYADEITLA 179
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 180 RALEGRREL 188
>gi|116333251|ref|YP_794778.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus
brevis ATCC 367]
gi|122270061|sp|Q03SS5|RECR_LACBA RecName: Full=Recombination protein recR
gi|116098598|gb|ABJ63747.1| DNA replication and repair protein RecR [Lactobacillus brevis ATCC
367]
Length = 199
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G +SA R + E + ++A+ + CSICGN+
Sbjct: 7 IAQLIDGYMKLPGIGQKSATRLAFFTIDMAEDDVTAFSKALIAAKRDLHFCSICGNITEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D+ RD + ++VVE D+ +E+ K + LYHVL G +SP++ GPED+ I S
Sbjct: 67 DPCSICADKTRDQTHVLVVEQPKDIMVMEKMKEYHGLYHVLHGVMSPIEGKGPEDLNIAS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LINRLQQNPNIKEVIIATNATPEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEYADE 186
Query: 189 GTIFEAIRSRT 199
T+F+A+ RT
Sbjct: 187 MTLFKAVEGRT 197
>gi|308233499|ref|ZP_07664236.1| DNA replication and repair protein RecR [Atopobium vaginae DSM
15829]
gi|328943417|ref|ZP_08240882.1| recombination protein R [Atopobium vaginae DSM 15829]
gi|327491386|gb|EGF23160.1| recombination protein R [Atopobium vaginae DSM 15829]
Length = 200
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 125/195 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + ++ ++ R+PG GP+SA+R L++ ++ L+ A+ N+ V C +C
Sbjct: 3 QTSNQALQFVLDEFGRLPGIGPKSAQRIAYFLMEADDETARRLSRAILNLKEHVHFCPVC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
T D CA+C D RD S + VV + D+ ++E++ + LYHVLGG +SP+D+IGPE
Sbjct: 63 FAYATDDVCALCNDSTRDVSKVCVVCEPRDIASIEKTGVYHGLYHVLGGVISPMDKIGPE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L+ R+ +I+E+I A++ T+EG+TTA Y+ +K + ++ TRLA G+P+G +L
Sbjct: 123 QLHVKELLARLAGDEIKEVILAMNPTVEGETTATYLARTIKTLGIQTTRLASGLPVGGDL 182
Query: 184 DYLDDGTIFEAIRSR 198
+Y+D+ T+ AI +R
Sbjct: 183 EYVDEVTLGRAIEAR 197
>gi|56750195|ref|YP_170896.1| recombination protein RecR [Synechococcus elongatus PCC 6301]
gi|73621523|sp|Q5N5P2|RECR_SYNP6 RecName: Full=Recombination protein recR
gi|172046613|sp|Q31NH0|RECR_SYNE7 RecName: Full=Recombination protein recR
gi|56685154|dbj|BAD78376.1| recombination protein RecR [Synechococcus elongatus PCC 6301]
Length = 199
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 124/191 (64%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L ++PG GP++A+R LHL+++ E + AEA+ +V C C ++
Sbjct: 6 RPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCFHLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC D +RDA I VV D D+ ALE+++ LYHVLGG +SP+D IGPE + +
Sbjct: 66 SEDLCNICRDPKRDAQTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQLTV 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q+L+ R+ ++ +E+I AIS ++EG+TT Y+ LK ++TR+A+G+PMG +L+Y D
Sbjct: 126 QALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLEYAD 184
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 185 EVTLARALEGR 195
>gi|78213164|ref|YP_381943.1| DNA replication and repair protein RecR [Synechococcus sp. CC9605]
gi|78197623|gb|ABB35388.1| recombination protein RecR [Synechococcus sp. CC9605]
Length = 219
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C ++
Sbjct: 27 KPLARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFHLS 86
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + +R VI VV D DL ALER++ + YHVLGG +SP+D IGPE + +
Sbjct: 87 ADPECEICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRV 146
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D
Sbjct: 147 TELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPF-CSVSRIAYGLPMGSELEYAD 205
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 206 EVTLSRALEGR 216
>gi|300773416|ref|ZP_07083285.1| recombination protein R [Sphingobacterium spiritivorum ATCC 33861]
gi|300759587|gb|EFK56414.1| recombination protein R [Sphingobacterium spiritivorum ATCC 33861]
Length = 204
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 119/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K ++ + R+PG G ++A R LHL+K+ + + A+ + ++ C C
Sbjct: 2 EFSSKLLQQAVDEFGRLPGIGQKTALRLVLHLLKQSDGEVLRFTGALNQLKEQIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC +RD S+I VVED D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 FNISDHDICEICSSLKRDKSLICVVEDTRDVMAIENTNQYQGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L++R+ ++E+I A+SAT+EG TT Y+ KLK D++I+ +A GI G EL
Sbjct: 122 DLKIEGLVQRLRSGHVKEVILALSATMEGDTTIFYLYRKLKEFDIQISTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEITLGRSIATR 196
>gi|227545159|ref|ZP_03975208.1| recombination protein RecR [Lactobacillus reuteri CF48-3A]
gi|300909168|ref|ZP_07126629.1| recombination protein R [Lactobacillus reuteri SD2112]
gi|227184891|gb|EEI64962.1| recombination protein RecR [Lactobacillus reuteri CF48-3A]
gi|300893033|gb|EFK86392.1| recombination protein R [Lactobacillus reuteri SD2112]
Length = 200
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 124/191 (64%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++PG G ++A R + + +E + A+++ + + CSICGN+
Sbjct: 8 LAKLIESYTKLPGIGQKTATRLAFYTLSMQEDDVTNFAKSLLSAKRDLHNCSICGNITED 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE + D+ A+ER + LYHVL G +SP+ GPEDI I S
Sbjct: 68 DPCPICRDKTRDHSQILVVEQLQDVMAMERMHEYHGLYHVLHGVISPVAGTGPEDINITS 127
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ +++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++DY D+
Sbjct: 128 LLKRLKKDNEVKEIIIATNASSDGELTAGYLAKLIKPAGIKVTRLAHGLSVGADIDYADE 187
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 188 MTLFKAVQGRT 198
>gi|149371245|ref|ZP_01890731.1| recombination protein recR [unidentified eubacterium SCB49]
gi|149355383|gb|EDM43942.1| recombination protein recR [unidentified eubacterium SCB49]
Length = 206
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 119/194 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + ++++PG G R+A R LHL+K+ + L+E++ + + CS C
Sbjct: 3 FSSKLLENAVNEMSQLPGIGKRTALRLVLHLLKQPKTQAIALSESIKELREDINFCSNCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC + R +++ VVED+ D+ A+E + YHVLGG +SP+D IGP +
Sbjct: 63 NISDVKVCEICSNPNRTKNIVCVVEDIRDVMAIENTSQYRGHYHVLGGKISPMDGIGPSE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQSL++++ + ELIFA+S+T+EG TT YI +L+ + IT +A GI +G EL+
Sbjct: 123 LTIQSLVDKVREGVVDELIFALSSTLEGDTTNFYIFKQLEKYPITITTIARGISVGDELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I R
Sbjct: 183 YADEVTLGRSILHR 196
>gi|54295586|ref|YP_128001.1| recombination and repair protein recR [Legionella pneumophila str.
Lens]
gi|54298740|ref|YP_125109.1| recombination protein RecR [Legionella pneumophila str. Paris]
gi|148361069|ref|YP_001252276.1| recombinational DNA repair protein RecR [Legionella pneumophila
str. Corby]
gi|296108400|ref|YP_003620101.1| recombination protein RecR [Legionella pneumophila 2300/99 Alcoy]
gi|73621494|sp|Q5X1D9|RECR_LEGPA RecName: Full=Recombination protein recR
gi|73621496|sp|Q5WT52|RECR_LEGPL RecName: Full=Recombination protein recR
gi|172047876|sp|A5IHT0|RECR_LEGPC RecName: Full=Recombination protein recR
gi|53752525|emb|CAH13957.1| Recombination and repair protein recR [Legionella pneumophila str.
Paris]
gi|53755418|emb|CAH16914.1| Recombination and repair protein recR [Legionella pneumophila str.
Lens]
gi|148282842|gb|ABQ56930.1| recombinational DNA repair protein RecR [Legionella pneumophila
str. Corby]
gi|295650302|gb|ADG26149.1| recombination protein RecR [Legionella pneumophila 2300/99 Alcoy]
Length = 197
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + Q LA + + C C N
Sbjct: 4 LSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQ 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+
Sbjct: 64 TLCTLCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPK 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL++LD
Sbjct: 124 LKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELEFLDGN 183
Query: 190 TIFEAIRSRTVL 201
TI A+++R V+
Sbjct: 184 TISSALKNRAVI 195
>gi|75908470|ref|YP_322766.1| recombination protein RecR [Anabaena variabilis ATCC 29413]
gi|123609556|sp|Q3MAW5|RECR_ANAVT RecName: Full=Recombination protein recR
gi|75702195|gb|ABA21871.1| DNA replication and repair protein RecR [Anabaena variabilis ATCC
29413]
Length = 185
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP++A+R LH++K+ E + LA+A+ ++ LCS+C ++ + C IC
Sbjct: 1 MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICR 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ R+ + I VV D D+ ALE+++ YHVLGG +SP+D IGPE + I L+ R+
Sbjct: 61 NPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
++ +E+I AIS ++EG+TT Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+
Sbjct: 121 QQPKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYADEITLARALE 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRREL 184
>gi|51891153|ref|YP_073844.1| recombination protein RecR [Symbiobacterium thermophilum IAM 14863]
gi|73621522|sp|Q67TJ3|RECR_SYMTH RecName: Full=Recombination protein recR
gi|51854842|dbj|BAD39000.1| recombination protein [Symbiobacterium thermophilum IAM 14863]
Length = 198
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 121/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L ++PG GP++A+R H++ + ++ +A + KV CS+C N+
Sbjct: 7 IARLIEELTKLPGIGPKTAQRLAFHILHMEPSVVEGIARTLVEARAKVKYCSVCCNLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I VV++ D+ A+E+++ + +YHVL G+L+P++ IG +DI ++
Sbjct: 67 DPCQICADDGRDHSTICVVQEPRDVVAMEKTREYHGVYHVLHGALNPMEGIGIDDIRVKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +++E+I + EG+TTA YI +K + VK+TR+A G+PMG +L+Y D+
Sbjct: 127 LVARLGDGRVQEVILCTNPNTEGETTAMYIARYIKPLGVKVTRIARGLPMGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAKALEGR 195
>gi|120554531|ref|YP_958882.1| recombination protein RecR [Marinobacter aquaeolei VT8]
gi|166221947|sp|A1U126|RECR_MARAV RecName: Full=Recombination protein recR
gi|120324380|gb|ABM18695.1| DNA replication and repair protein RecR [Marinobacter aquaeolei
VT8]
Length = 200
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG G ++A+R HL+++ LA A+ + + V C C N T
Sbjct: 7 VDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGTRLAAALNHAMDGVRRCDSCQNFSDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +R + VVE +DL A+E++ Y VL G LSP+D +GPE+IGI+
Sbjct: 67 EICQICEKPERRNGTLCVVESPSDLLAIEQAGDYKGSYFVLMGHLSPIDGVGPEEIGIER 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ + + ELI A + T+EG+ TAHYI D+L G ++ ITRLA+GIP+G EL Y+D
Sbjct: 127 LLDRVRREGVTELILATNPTVEGEATAHYIADRLDGQNILITRLAHGIPVGGELGYVDGF 186
Query: 190 TIFEAIRSRTVL 201
T+ A R R L
Sbjct: 187 TLTHAFRGRKPL 198
>gi|312142721|ref|YP_003994167.1| recombination protein RecR [Halanaerobium sp. 'sapolanicus']
gi|311903372|gb|ADQ13813.1| recombination protein RecR [Halanaerobium sp. 'sapolanicus']
Length = 199
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 121/186 (65%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L+++PG GP++ARR + +++ + + + L++A+ +K+ CS C ++ D C
Sbjct: 11 LIGELSKLPGIGPKTARRLSFYILGQSKNEVKTLSDALIEARDKINYCSRCNHLTEGDIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+ C +RD S+I VVE D+ A+E++ N LYHVL G++SP+D IGP+ I I+SL+
Sbjct: 71 SFCSSDERDLSIICVVESPRDVVAMEKTGEYNGLYHVLHGAISPMDGIGPDQIKIRSLMP 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E ++ E+I A EG TA Y+ +K + VK+TR+A+GIP+G +L+Y D+ T+
Sbjct: 131 RLEKGEVEEIIIATDPNAEGDATAMYLAKLIKPLGVKVTRIAHGIPVGGDLEYADEVTLS 190
Query: 193 EAIRSR 198
+A+ R
Sbjct: 191 KALEGR 196
>gi|81300178|ref|YP_400386.1| recombination protein RecR [Synechococcus elongatus PCC 7942]
gi|81169059|gb|ABB57399.1| DNA replication and repair protein RecR [Synechococcus elongatus
PCC 7942]
Length = 211
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 124/191 (64%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L ++PG GP++A+R LHL+++ E + AEA+ +V C C ++
Sbjct: 18 RPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCFHLS 77
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ D C IC D +RDA I VV D D+ ALE+++ LYHVLGG +SP+D IGPE + +
Sbjct: 78 SEDLCNICRDPKRDAQTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQLTV 137
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q+L+ R+ ++ +E+I AIS ++EG+TT Y+ LK ++TR+A+G+PMG +L+Y D
Sbjct: 138 QALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLEYAD 196
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 197 EVTLARALEGR 207
>gi|264677768|ref|YP_003277674.1| recombination protein RecR [Comamonas testosteroni CNB-2]
gi|262208280|gb|ACY32378.1| recombination protein RecR [Comamonas testosteroni CNB-2]
Length = 196
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C
Sbjct: 5 QSLDTLIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D RD + + VVE ADL A+ER+ A Y+VL G LSPLD +GP++IG+
Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTGAYQGYYYVLMGRLSPLDGVGPKEIGM 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER ++E+I A S T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAVSEALKSRGILVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALVDR 195
>gi|299144508|ref|ZP_07037587.1| recombination protein RecR [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517596|gb|EFI41336.1| recombination protein RecR [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 199
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 120/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K K IENLI L ++PG G ++A+R H++ + + L++A+ + V CSIC
Sbjct: 2 KNRAKPIENLINQLNKLPGVGNKTAQRLAYHIIDMDFEKVKALSDAITSAKENVKQCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N DPC IC D RD SVI VVE D+ A+ER+ + +YHVL G++SP IGP
Sbjct: 62 ANFTDIDPCKICNDTNRDESVICVVEYPKDVEAMERATCYHGMYHVLHGTISPNKGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I+ L++R+E I E+I A + T EG TTA YI L + +K TR+AYGIP+G +L
Sbjct: 122 NLKIRELLKRLENNNIEEIIIATNPTAEGDTTALYISKLLSPLGIKTTRIAYGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ TI A+ +R
Sbjct: 182 EYYDELTISTALENR 196
>gi|225870068|ref|YP_002746015.1| recombination protein RecR [Streptococcus equi subsp. equi 4047]
gi|254790784|sp|C0M8S3|RECR_STRE4 RecName: Full=Recombination protein recR
gi|225699472|emb|CAW92992.1| recombination protein RecR [Streptococcus equi subsp. equi 4047]
Length = 198
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD +I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCHICTDSSRDKEIILVVEDSKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMAGEATEVIVATNATADGEATAMYISRLLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|257464254|ref|ZP_05628633.1| recombination protein recR [Fusobacterium sp. D12]
gi|317061771|ref|ZP_07926256.1| recombination protein recR [Fusobacterium sp. D12]
gi|313687447|gb|EFS24282.1| recombination protein recR [Fusobacterium sp. D12]
Length = 197
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 118/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H++ EQ + +A+ ++ K+ C +CG+
Sbjct: 4 KSLERLIDQFHKLPGIGRKSATRLGFHILDYSEQEIEDFIQALEDVKGKIKRCPVCGDYC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D+ RD I +VED D+ +LE++ LYH+LGG L+PL + P+ + +
Sbjct: 64 EDSLCPICADEARDRRSICIVEDSRDVISLEKTGKYRGLYHILGGKLAPLQGVTPDKLNL 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ERI ++I+E+I A++ +EG+TTA Y++ LK D++IT++A GIPMG L++ D
Sbjct: 124 KPLLERITKEEIQEIILALNPDLEGETTAMYLVKLLKPFDIRITKIASGIPMGGNLEFAD 183
Query: 188 DGTIFEAIRSR 198
TI A+ +R
Sbjct: 184 SATIARALDAR 194
>gi|148239861|ref|YP_001225248.1| recombination protein RecR [Synechococcus sp. WH 7803]
gi|172047796|sp|A5GLY6|RECR_SYNPW RecName: Full=Recombination protein recR
gi|147848400|emb|CAK23951.1| Recombination protein RecR [Synechococcus sp. WH 7803]
Length = 199
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI R+PG GPR+A+R LHL+++ E+ + A+A+ +V C C ++
Sbjct: 6 RPLARLIDQFERLPGIGPRTAQRLALHLLRQPEEQIRSFADALLAARTEVGHCQTCHHLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + +R I VV D DL ALER++ + YHVLGG +SP+D IGP+ + I
Sbjct: 66 AEPTCEICRNPERANGQICVVADSRDLLALERTREFSGHYHVLGGLISPMDGIGPDLLQI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL++R+ E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D
Sbjct: 126 SSLVKRVAANNTEEVILALTPSVEGDTTSLYVARLLKPF-TRVSRIAYGLPVGSELEYAD 184
Query: 188 DGTIFEAIRSR 198
D T+ A+ R
Sbjct: 185 DVTLSRALEGR 195
>gi|15675339|ref|NP_269513.1| recombination protein RecR [Streptococcus pyogenes M1 GAS]
gi|19746381|ref|NP_607517.1| recombination protein RecR [Streptococcus pyogenes MGAS8232]
gi|21910621|ref|NP_664889.1| recombination protein RecR [Streptococcus pyogenes MGAS315]
gi|71903815|ref|YP_280618.1| recombination protein RecR [Streptococcus pyogenes MGAS6180]
gi|71910972|ref|YP_282522.1| recombination protein RecR [Streptococcus pyogenes MGAS5005]
gi|94988836|ref|YP_596937.1| recombination protein RecR [Streptococcus pyogenes MGAS9429]
gi|94990739|ref|YP_598839.1| recombination protein RecR [Streptococcus pyogenes MGAS10270]
gi|94992727|ref|YP_600826.1| recombination protein RecR [Streptococcus pyogenes MGAS2096]
gi|161761308|ref|YP_060504.2| recombination protein RecR [Streptococcus pyogenes MGAS10394]
gi|209559649|ref|YP_002286121.1| recombination protein RecR [Streptococcus pyogenes NZ131]
gi|306827068|ref|ZP_07460366.1| recombination protein R [Streptococcus pyogenes ATCC 10782]
gi|54039041|sp|P65995|RECR_STRP3 RecName: Full=Recombination protein recR
gi|54039042|sp|P65996|RECR_STRP8 RecName: Full=Recombination protein recR
gi|54041800|sp|P65994|RECR_STRP1 RecName: Full=Recombination protein recR
gi|68053075|sp|Q5XB92|RECR_STRP6 RecName: Full=Recombination protein recR
gi|123639623|sp|Q48SP7|RECR_STRPM RecName: Full=Recombination protein recR
gi|166223504|sp|Q1JAX6|RECR_STRPB RecName: Full=Recombination protein recR
gi|166223505|sp|Q1JL26|RECR_STRPC RecName: Full=Recombination protein recR
gi|166223506|sp|Q1JG49|RECR_STRPD RecName: Full=Recombination protein recR
gi|172046750|sp|Q1J5W6|RECR_STRPF RecName: Full=Recombination protein recR
gi|226726312|sp|B5XM64|RECR_STRPZ RecName: Full=Recombination protein recR
gi|13622521|gb|AAK34234.1| putative recombination protein [Streptococcus pyogenes M1 GAS]
gi|19748579|gb|AAL98016.1| putative recombination protein [Streptococcus pyogenes MGAS8232]
gi|21904823|gb|AAM79692.1| recombination protein recR [Streptococcus pyogenes MGAS315]
gi|71802910|gb|AAX72263.1| recombination protein [Streptococcus pyogenes MGAS6180]
gi|71853754|gb|AAZ51777.1| recombination protein [Streptococcus pyogenes MGAS5005]
gi|94542344|gb|ABF32393.1| recombination protein [Streptococcus pyogenes MGAS9429]
gi|94544247|gb|ABF34295.1| Recombination protein recR [Streptococcus pyogenes MGAS10270]
gi|94546235|gb|ABF36282.1| Recombination protein recR [Streptococcus pyogenes MGAS2096]
gi|209540850|gb|ACI61426.1| Recombination protein recR [Streptococcus pyogenes NZ131]
gi|304430814|gb|EFM33825.1| recombination protein R [Streptococcus pyogenes ATCC 10782]
Length = 198
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|110932060|gb|ABH02983.1| RecR [Spirochaeta aurantia]
Length = 182
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 107/179 (59%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
PG G +SA R HL+K L L ++ + + V CSICGN DPC IC D R
Sbjct: 1 PGLGKKSAVRMAFHLLKADRDYLNQLGRQISTLRDSVVRCSICGNYTEADPCEICSDPTR 60
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIR 140
D +V+ VVE V DL L+ + L+HVL G ++PLD IGP ++G+ L R+ +R
Sbjct: 61 DQTVLCVVEQVQDLMNLQATGEFRGLFHVLHGVIAPLDGIGPAELGLDRLDRRLAEGTVR 120
Query: 141 ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
E+I A + T+EG TTA YI L +KITRLA G+P+G +L+Y D TI A+++R+
Sbjct: 121 EVILATNPTLEGDTTALYIHRMLGPRQLKITRLASGLPVGGDLEYADRLTIARALKARS 179
>gi|307611626|emb|CBX01311.1| recombination and repair protein recR [Legionella pneumophila 130b]
Length = 197
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + Q LA + + C C N
Sbjct: 4 LSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQ 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+
Sbjct: 64 TLCTLCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPK 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL++LD
Sbjct: 124 LKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDEAVNISQLAHGIPSGGELEFLDGN 183
Query: 190 TIFEAIRSRTVL 201
TI A+++R V+
Sbjct: 184 TISSALKNRAVI 195
>gi|260435450|ref|ZP_05789420.1| recombination protein RecR [Synechococcus sp. WH 8109]
gi|260413324|gb|EEX06620.1| recombination protein RecR [Synechococcus sp. WH 8109]
Length = 219
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C ++
Sbjct: 27 KPLARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFHLS 86
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC + +R VI VV D DL ALER++ YHVLGG +SP+D IGPE + +
Sbjct: 87 ADPECEICRNPERRNGVICVVADSRDLLALERTREFQGRYHVLGGLISPMDGIGPELLHV 146
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D
Sbjct: 147 TELVQRITNEEISEVILALTPSVEGDTTSLYLGRLLKPF-CSVSRIAYGLPMGSELEYAD 205
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 206 EVTLSRALEGR 216
>gi|320451189|ref|YP_004203285.1| recombination protein RecR [Thermus scotoductus SA-01]
gi|320151358|gb|ADW22736.1| recombination protein RecR [Thermus scotoductus SA-01]
Length = 194
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 126/194 (64%), Gaps = 7/194 (3%)
Query: 11 ENLIKI---LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
E+L+K+ L+R+PG GP++A++ +LHL +E+ + +C +CGN+
Sbjct: 5 ESLLKLARALSRLPGIGPKTAQKLSLHLAFHREEAEELERALAG--LEALGVCRVCGNLA 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD SVI VVE V+DL+ALERS + LYHVLGG+L+PL+ +GP ++ +
Sbjct: 63 EGELCPICQDETRDRSVIAVVETVSDLYALERSGEFHGLYHVLGGALNPLEGVGPRELNL 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL R+ + E++ A S T+EG+ TA ++ ++LK ++ +RLAYG+P+G L+Y+D
Sbjct: 123 ESLWARL--SGVEEVVLATSMTVEGEATALFLAEELKRRGIRASRLAYGLPVGGSLEYVD 180
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R L
Sbjct: 181 EVTLGRALEGRKPL 194
>gi|323345662|ref|ZP_08085885.1| recombination protein R [Prevotella oralis ATCC 33269]
gi|323093776|gb|EFZ36354.1| recombination protein R [Prevotella oralis ATCC 33269]
Length = 203
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 125/199 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + + + A+ + + C
Sbjct: 1 MDQQYPSALLEKAVNEFSKLPGIGRKTALRLVLHLLRRSNEDVETFSTAITTMKQHIKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C N+ TD C+IC D RDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 NVCHNISDTDVCSICSDSHRDASTICVVENIQDVMAVENTQQFRGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ER+ I E+I A+S+T+EG TT YI KL+ VK++ +A GI +G
Sbjct: 121 GPNDLEINSLVERVMQGGIDEIILALSSTMEGDTTNFYISRKLQSFPVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSILNRT 199
>gi|312129997|ref|YP_003997337.1| recombination protein recr [Leadbetterella byssophila DSM 17132]
gi|311906543|gb|ADQ16984.1| recombination protein RecR [Leadbetterella byssophila DSM 17132]
Length = 200
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 120/192 (62%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ IE + ++++PG G +SA R LHL+K +Q+ L+ A+ N+ C+ C N+
Sbjct: 6 RTIEEAVSEISKLPGIGKKSALRMALHLLKSDKQVAHSLSSALVNLVENTTFCTECHNIS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC +R+ S+I VV+D D+ A+E + LYHVLGG ++P+ IGP + I
Sbjct: 66 DQSICQICSSHRRERSIIAVVQDTKDVLAIENTGQYQGLYHVLGGVIAPVQGIGPNQLHI 125
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+L+ER+ + ++++E+I A+S T+EG TTA YI KL ++I+ +A GIP+G +L+Y
Sbjct: 126 DALVERLRKNEEVKEVILALSPTMEGDTTAFYIRKKLAEFPIRISTIARGIPVGGDLEYT 185
Query: 187 DDGTIFEAIRSR 198
D+ T+ +I SR
Sbjct: 186 DEITLGRSILSR 197
>gi|182414592|ref|YP_001819658.1| recombination protein RecR [Opitutus terrae PB90-1]
gi|177841806|gb|ACB76058.1| recombination protein RecR [Opitutus terrae PB90-1]
Length = 198
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L + L ++PG G RS+ R LHL+ +K Q L L A+ V C+ CGN+
Sbjct: 5 FEKLQQQLKQLPGLGYRSSERIALHLLVEKPQRLPALVAALEEAARTVRRCTRCGNLAEA 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D++RD S++ VVE+V DL ALERS A +YHVL G LSP+ +GP+D+ + S
Sbjct: 65 ELCPICADERRDPSLVCVVEEVPDLVALERSGAYRGVYHVLHGKLSPMHGVGPDDLNVAS 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E + ELI A+S +EG+ T HY+ ++L KG +ITR+ +G+P G + Y D
Sbjct: 125 LLARVESGAVGELILALSNDVEGEATCHYLTEQLKKGKAPQITRIGFGLPSGGGVLYADS 184
Query: 189 GTIFEAIRSR 198
T+ A+ +R
Sbjct: 185 VTLKSALDAR 194
>gi|108758594|ref|YP_630174.1| recombination protein RecR [Myxococcus xanthus DK 1622]
gi|123247980|sp|Q1DAZ9|RECR_MYXXD RecName: Full=Recombination protein recR
gi|108462474|gb|ABF87659.1| recombination protein RecR [Myxococcus xanthus DK 1622]
Length = 197
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 120/194 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+T + L+ LA++PG G ++A+R H+++ + L++A+ + KV LC C
Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRAPGEYAAELSQAIREVKEKVHLCVRCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C C D +RD V+ VVE ADL ALER++ YHVL G LSPL+ +GP+
Sbjct: 61 SLTDAETCNFCRDARRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ER+ ++ ELI A + +EG+ TA Y+ LK + +++TR+A G+PMG +L+
Sbjct: 121 LRIRELLERLNDSRVEELILATNPDVEGEATALYLTRLLKPMGLRVTRIAQGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
+ D T+ +A+ +R
Sbjct: 181 FADQATLAKALSAR 194
>gi|93005630|ref|YP_580067.1| recombination protein RecR [Psychrobacter cryohalolentis K5]
gi|122415701|sp|Q1QCM0|RECR_PSYCK RecName: Full=Recombination protein recR
gi|92393308|gb|ABE74583.1| DNA replication and repair protein RecR [Psychrobacter
cryohalolentis K5]
Length = 197
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 118/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ + L+K L +PG G +SA+R LHL+ KK LA+A+ + C C +
Sbjct: 5 KFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSFSD 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C +C D +RD +++ VVE AD+ A+E++ Y VLGG LSP+D I +D+ I+
Sbjct: 65 EAVCPLCQDPRRDDTLLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDLNIE 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + + ELI A T+EGQTTAH+I + + K+TRLA G+PMG EL+YLD
Sbjct: 125 QLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVSRHVNKVTRLAQGVPMGGELEYLDS 184
Query: 189 GTIFEAIRSRTVL 201
T+ +A+++R+ L
Sbjct: 185 MTLGQAMQNRSFL 197
>gi|87124741|ref|ZP_01080589.1| RecR protein [Synechococcus sp. RS9917]
gi|86167620|gb|EAQ68879.1| RecR protein [Synechococcus sp. RS9917]
Length = 190
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 119/187 (63%), Gaps = 2/187 (1%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I+ R+PG GPR+A+R LHL+++ E+ + AEA+ +V C C ++ C
Sbjct: 1 MIEQFERLPGIGPRTAQRLALHLLRQPEEQIQSFAEALLAARRQVGQCQTCFHLSAEPTC 60
Query: 73 AICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
IC + +R S ++ VV D DL ALER++ YHVLGG +SP+D IGPE + + SL+
Sbjct: 61 EICRNPERGTSGLLCVVADSRDLLALERTREYAGRYHVLGGLISPMDGIGPEMLQVSSLV 120
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+E + E+I A++ ++EG TT+ Y+ L+ +++R+AYG+P+GSEL+Y DD T+
Sbjct: 121 QRVERESTAEVILALTPSVEGDTTSLYLARLLRPF-TRVSRIAYGLPVGSELEYADDVTL 179
Query: 192 FEAIRSR 198
A+ R
Sbjct: 180 SRALEGR 186
>gi|310778209|ref|YP_003966542.1| recombination protein RecR [Ilyobacter polytropus DSM 2926]
gi|309747532|gb|ADO82194.1| recombination protein RecR [Ilyobacter polytropus DSM 2926]
Length = 197
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 118/194 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H+++ + + AEA+ N+ + V C ICGN
Sbjct: 4 KSLERLIDEFNKLPGIGRKSATRLAFHVLEMDDMEVNIFAEAIKNVKSSVKKCVICGNFG 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C +C D+ R +I VVED D+ + E++K YHVL G + PL+ + P+ + I
Sbjct: 64 EEETCDVCRDEYRTNEIICVVEDTRDIVSFEKAKKYRGRYHVLNGKIDPLNGMTPDKLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ + ++E+I A++ +EG+TTA Y+ + LK +K+T++A GIPMG +++ D
Sbjct: 124 KSLVERVAAEDVKEVILAMNPDLEGETTAMYLTNLLKPFGIKVTKIASGIPMGGNIEFSD 183
Query: 188 DGTIFEAIRSRTVL 201
TI +A+ R L
Sbjct: 184 IATISKALEGRREL 197
>gi|254490431|ref|ZP_05103617.1| recombination protein RecR [Methylophaga thiooxidans DMS010]
gi|224464175|gb|EEF80438.1| recombination protein RecR [Methylophaga thiooxydans DMS010]
Length = 199
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 118/192 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G I+ LI L +PG GP+SA+R T HL+++ + LA+A+ + + V C C +
Sbjct: 5 GPSIDELISALRCLPGVGPKSAQRMTFHLLERNREGGAHLAKALMDALDNVQHCRRCRIL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+D C C D++R + +VE +D+ A+E++ Y VL G LSPLD IGPE +G
Sbjct: 65 CESDICIRCQDERRQQDQLCIVEMPSDVLAIEQATHYKGQYFVLSGHLSPLDGIGPEALG 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I LIE ++ K I E+I A + T+EG+ TAHYI + + +K+TRLA+GIP+G EL+++
Sbjct: 125 IPRLIEWLDEKTILEVILATNPTVEGEATAHYISELARERQIKVTRLAHGIPLGGELEFI 184
Query: 187 DDGTIFEAIRSR 198
D GT+ A R
Sbjct: 185 DSGTLSHAFSGR 196
>gi|299531589|ref|ZP_07044994.1| recombination protein RecR [Comamonas testosteroni S44]
gi|298720305|gb|EFI61257.1| recombination protein RecR [Comamonas testosteroni S44]
Length = 196
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C
Sbjct: 5 QSLDALIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D RD + + VVE ADL A+ER+ A Y+VL G LSPLD +GP++IG+
Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTGAYQGYYYVLMGRLSPLDGVGPKEIGM 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER ++E+I A S T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAVSEALKSRGILVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALVDR 195
>gi|220934250|ref|YP_002513149.1| recombination protein RecR [Thioalkalivibrio sp. HL-EbGR7]
gi|219995560|gb|ACL72162.1| recombination protein RecR [Thioalkalivibrio sp. HL-EbGR7]
Length = 197
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 118/193 (61%), Gaps = 8/193 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKK----EQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI L +PG GP+SA+R LHL+++ E+L L +AMA I + C +C
Sbjct: 6 LDELIDALRCLPGVGPKSAQRMALHLLERDRPGGERLAAVLQDAMARIGH----CKVCRT 61
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D R V+ VVE AD+ A+E++ YHVL G LSPLD IGPE++
Sbjct: 62 LTEHELCRVCADPGRQRDVLCVVETPADVLAVEQATGFRGQYHVLLGHLSPLDGIGPEEL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R++ +IRE+I A S T EG+ TAHYI + + ++ TR+A+G+P+G EL+Y
Sbjct: 122 GLDRLETRLDQGEIREVILATSTTAEGEVTAHYIGELARARGIRSTRIAHGVPLGGELEY 181
Query: 186 LDDGTIFEAIRSR 198
+D GT+ A R
Sbjct: 182 VDRGTLSHAFEGR 194
>gi|268318152|ref|YP_003291871.1| recombination protein RecR [Rhodothermus marinus DSM 4252]
gi|262335686|gb|ACY49483.1| recombination protein RecR [Rhodothermus marinus DSM 4252]
Length = 215
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 128/214 (59%), Gaps = 16/214 (7%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
T +E L++ L R+P G ++A+R +++K + + LA+A+ + +V C+IC
Sbjct: 2 SFTSPSVEALVEQLMRLPTVGRKTAQRLAAYILKMPREEVEALAQALLAVKERVRQCAIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
NV + CAIC +RD + I VVE+ +D+ ALER+ +YHVLGG +SPLD IGP+
Sbjct: 62 FNVTDEEVCAICRSPRRDHTTICVVEEPSDVLALERTGEYRGVYHVLGGVISPLDGIGPD 121
Query: 124 DIGIQSLIERI----------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGID 167
D+ I+ L+ R+ + +++E+I A++ +EG TTA+Y+ LK +
Sbjct: 122 DLRIRELVARVAPANGDPERAALYPDGRIPRVQEVILALNPNVEGDTTAYYLAQLLKPLG 181
Query: 168 VKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
V++TR+A G+P+G +L+Y D+ T+ A+ R L
Sbjct: 182 VRVTRIARGLPIGGDLEYADEATLSRALEGRLAL 215
>gi|42518520|ref|NP_964450.1| recombination protein RecR [Lactobacillus johnsonii NCC 533]
gi|73621493|sp|Q74KZ9|RECR_LACJO RecName: Full=Recombination protein recR
gi|41582805|gb|AAS08416.1| recombination protein RecR [Lactobacillus johnsonii NCC 533]
Length = 199
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDSNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|322517156|ref|ZP_08070040.1| recombination protein R [Streptococcus vestibularis ATCC 49124]
gi|322124306|gb|EFX95817.1| recombination protein R [Streptococcus vestibularis ATCC 49124]
Length = 202
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 11 IAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC+D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 71 DPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDDINLKS 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 131 LITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 190
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 191 TLLRAIENRTEL 202
>gi|213966435|ref|ZP_03394612.1| recombination protein RecR [Corynebacterium amycolatum SK46]
gi|213950928|gb|EEB62333.1| recombination protein RecR [Corynebacterium amycolatum SK46]
Length = 208
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 122/200 (61%), Gaps = 11/200 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R +L+K + + +G L A+ + V C +CGN+ T
Sbjct: 6 LQDLIDEFSRLPGIGPKSAQRIAFYLMKAEPEDIGRLQSALGRVREGVQFCRVCGNISET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C C D +RD ++ VVE+ D+ A+ER+ N YHVLGG+L PL IGP ++ I++
Sbjct: 66 DVCQYCSDTRRDRGLVCVVEEARDIQAIERTGEYNGRYHVLGGALDPLGGIGPNELNIRT 125
Query: 130 LIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIP 178
L++RI + +I E+I A EG+ TA Y+ L+ D+++TRLA G+P
Sbjct: 126 LLQRIAGVLDDVDETQPPEIHEVIIATDPNTEGEATATYLARLLRDFPDLEVTRLASGMP 185
Query: 179 MGSELDYLDDGTIFEAIRSR 198
+G +L+++D+ T+ A+ R
Sbjct: 186 LGGDLEFVDELTLSRALTGR 205
>gi|313890725|ref|ZP_07824350.1| recombination protein RecR [Streptococcus pseudoporcinus SPIN
20026]
gi|332523484|ref|ZP_08399736.1| recombination protein RecR [Streptococcus porcinus str. Jelinkova
176]
gi|313120826|gb|EFR43940.1| recombination protein RecR [Streptococcus pseudoporcinus SPIN
20026]
gi|332314748|gb|EGJ27733.1| recombination protein RecR [Streptococcus porcinus str. Jelinkova
176]
Length = 198
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGVKTATRLAFYTISMSDDDVNDFAKNLLAAKRELTYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC+D RD S I+VVE+ D+ A+E+ + + YHVL G +SP++ +GP+DI +++
Sbjct: 67 DPCSICMDPSRDKSQILVVEESKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKA 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A SAT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSDVQEVIIATSATADGEATSMYISRILKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|312863516|ref|ZP_07723754.1| recombination protein RecR [Streptococcus vestibularis F0396]
gi|311101052|gb|EFQ59257.1| recombination protein RecR [Streptococcus vestibularis F0396]
Length = 198
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 7 IAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC+D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|225163779|ref|ZP_03726078.1| recombination protein RecR [Opitutaceae bacterium TAV2]
gi|224801609|gb|EEG19906.1| recombination protein RecR [Opitutaceae bacterium TAV2]
Length = 198
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70
E L + L ++PG G RSA R LHL+ +K L L +A+ + V C+ CGN+ TD
Sbjct: 5 ERLQQQLKQLPGLGYRSAERIALHLLVEKPARLPALVQALEDAARTVRRCTRCGNLAETD 64
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C +C D RD +++ VVE V DL A+ERS A YHVL G LSP++ +GP+D+ L
Sbjct: 65 LCPLCADPTRDPAIVCVVEHVPDLVAMERSAAYRGHYHVLHGKLSPINGVGPDDLNYAPL 124
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIPMGSELDYLDD 188
+R++ I ELI A+S +EG+ T H++ +L + +KITR+ +G+P G+ + Y D
Sbjct: 125 ADRVQRGDIHELILALSNDVEGEATCHFLTQQLTTLQPALKITRIGFGLPSGAGVLYADS 184
Query: 189 GTIFEAIRSRT 199
T+ A+ +RT
Sbjct: 185 VTLKSALEART 195
>gi|7007421|dbj|BAA90838.1| RecR [Bacillus halodurans]
Length = 164
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 110/163 (67%)
Query: 39 KEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALE 98
KE + A+A+ N+ K+ CS+C N+ TDPC IC D +RD SVI VV+D D+ A+E
Sbjct: 2 KEDDVLDFAKALVNVKRKLTYCSVCHNITDTDPCRICEDSKRDESVICVVQDAKDVIAME 61
Query: 99 RSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHY 158
+ K + YHVL G++SP+D IGPEDI I LI+R++ I+E+I A + TIEG+ TA Y
Sbjct: 62 KMKEYHGKYHVLHGAISPMDGIGPEDIKIPELIKRLQDDTIQEVIVATNPTIEGEATAMY 121
Query: 159 IMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
I +K +K+TR+A+G+P+G +L+Y D+ T+ +A+ R L
Sbjct: 122 ISRLVKPTGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREL 164
>gi|113955202|ref|YP_730250.1| recombination protein RecR [Synechococcus sp. CC9311]
gi|123327873|sp|Q0IBC2|RECR_SYNS3 RecName: Full=Recombination protein recR
gi|113882553|gb|ABI47511.1| recombination protein RecR [Synechococcus sp. CC9311]
Length = 189
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I R+PG GPR+A+R LHL+++ E+ + A+A+ ++V C C ++ C
Sbjct: 1 MIDQFERLPGIGPRTAQRLALHLLRQPEEQIHSFADALLAARSQVGQCQTCFHLSAEPTC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R ++ VV D DL ALER++ YHVLGG +SP+D IGPE + I +L++
Sbjct: 61 EICRNPERSIGMLCVVADSRDLLALERTREYAGRYHVLGGLISPMDGIGPEMLQISNLVK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ +I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y DD T+
Sbjct: 121 RVAADEINEVILALTPSVEGDTTSLYLARLLKPF-TEVSRIAYGLPVGSELEYADDVTLS 179
Query: 193 EAIRSR 198
A+ R
Sbjct: 180 RALEGR 185
>gi|332971096|gb|EGK10064.1| recombination protein R [Desmospora sp. 8437]
Length = 198
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI R+PG GP++A+R ++ +E+ + LA+A+ + + C +C N+
Sbjct: 7 ISKLIDGFMRLPGIGPKTAQRLAFFVLGMEEEDVMELAKALVHAKRDLKRCQVCSNITDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C++C D+ RD S+I VV+D D+ A+ER++ LYHVL G++SP++ IGP+++ I
Sbjct: 67 PVCSVCRDKSRDRSMICVVQDPRDVIAMERTREYAGLYHVLHGAISPMEGIGPDELSIPD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E + ++E+I A + IEG+ TA Y+ +K +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLKRLEDETVQEMILATNPNIEGEATAMYLQRLVKPFGIKVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLTKALEGRREL 198
>gi|327334776|gb|EGE76487.1| recombination protein RecR [Propionibacterium acnes HL097PA1]
Length = 201
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC NV +
Sbjct: 6 LQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICFNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D+ I+
Sbjct: 66 EVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPADLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 126 LCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|50841698|ref|YP_054925.1| putative recombination protein RecR [Propionibacterium acnes
KPA171202]
gi|282853261|ref|ZP_06262598.1| recombination protein RecR [Propionibacterium acnes J139]
gi|289424537|ref|ZP_06426320.1| recombination protein RecR [Propionibacterium acnes SK187]
gi|289428817|ref|ZP_06430497.1| recombination protein RecR [Propionibacterium acnes J165]
gi|295129773|ref|YP_003580436.1| recombination protein RecR [Propionibacterium acnes SK137]
gi|73621506|sp|Q6AB99|RECR_PROAC RecName: Full=Recombination protein recR
gi|50839300|gb|AAT81967.1| putative recombination protein RecR [Propionibacterium acnes
KPA171202]
gi|282582714|gb|EFB88094.1| recombination protein RecR [Propionibacterium acnes J139]
gi|289155234|gb|EFD03916.1| recombination protein RecR [Propionibacterium acnes SK187]
gi|289157818|gb|EFD06041.1| recombination protein RecR [Propionibacterium acnes J165]
gi|291375135|gb|ADD98989.1| recombination protein RecR [Propionibacterium acnes SK137]
gi|313772742|gb|EFS38708.1| recombination protein RecR [Propionibacterium acnes HL074PA1]
gi|313793233|gb|EFS41300.1| recombination protein RecR [Propionibacterium acnes HL110PA1]
gi|313802803|gb|EFS44019.1| recombination protein RecR [Propionibacterium acnes HL110PA2]
gi|313806719|gb|EFS45224.1| recombination protein RecR [Propionibacterium acnes HL087PA2]
gi|313811223|gb|EFS48937.1| recombination protein RecR [Propionibacterium acnes HL083PA1]
gi|313813995|gb|EFS51709.1| recombination protein RecR [Propionibacterium acnes HL025PA1]
gi|313817486|gb|EFS55200.1| recombination protein RecR [Propionibacterium acnes HL046PA2]
gi|313821298|gb|EFS59012.1| recombination protein RecR [Propionibacterium acnes HL036PA1]
gi|313824760|gb|EFS62474.1| recombination protein RecR [Propionibacterium acnes HL036PA2]
gi|313826422|gb|EFS64136.1| recombination protein RecR [Propionibacterium acnes HL063PA1]
gi|313828819|gb|EFS66533.1| recombination protein RecR [Propionibacterium acnes HL063PA2]
gi|313832226|gb|EFS69940.1| recombination protein RecR [Propionibacterium acnes HL007PA1]
gi|313834282|gb|EFS71996.1| recombination protein RecR [Propionibacterium acnes HL056PA1]
gi|313840339|gb|EFS78053.1| recombination protein RecR [Propionibacterium acnes HL086PA1]
gi|314922446|gb|EFS86277.1| recombination protein RecR [Propionibacterium acnes HL001PA1]
gi|314926532|gb|EFS90363.1| recombination protein RecR [Propionibacterium acnes HL036PA3]
gi|314961564|gb|EFT05665.1| recombination protein RecR [Propionibacterium acnes HL002PA2]
gi|314964644|gb|EFT08744.1| recombination protein RecR [Propionibacterium acnes HL082PA1]
gi|314969352|gb|EFT13450.1| recombination protein RecR [Propionibacterium acnes HL037PA1]
gi|314974377|gb|EFT18472.1| recombination protein RecR [Propionibacterium acnes HL053PA1]
gi|314976989|gb|EFT21084.1| recombination protein RecR [Propionibacterium acnes HL045PA1]
gi|314980019|gb|EFT24113.1| recombination protein RecR [Propionibacterium acnes HL072PA2]
gi|314982795|gb|EFT26887.1| recombination protein RecR [Propionibacterium acnes HL110PA3]
gi|314985373|gb|EFT29465.1| recombination protein RecR [Propionibacterium acnes HL005PA1]
gi|314987436|gb|EFT31527.1| recombination protein RecR [Propionibacterium acnes HL005PA2]
gi|314989200|gb|EFT33291.1| recombination protein RecR [Propionibacterium acnes HL005PA3]
gi|315078846|gb|EFT50868.1| recombination protein RecR [Propionibacterium acnes HL053PA2]
gi|315081811|gb|EFT53787.1| recombination protein RecR [Propionibacterium acnes HL078PA1]
gi|315082835|gb|EFT54811.1| recombination protein RecR [Propionibacterium acnes HL027PA2]
gi|315086410|gb|EFT58386.1| recombination protein RecR [Propionibacterium acnes HL002PA3]
gi|315087897|gb|EFT59873.1| recombination protein RecR [Propionibacterium acnes HL072PA1]
gi|315091448|gb|EFT63424.1| recombination protein RecR [Propionibacterium acnes HL110PA4]
gi|315094386|gb|EFT66362.1| recombination protein RecR [Propionibacterium acnes HL060PA1]
gi|315097212|gb|EFT69188.1| recombination protein RecR [Propionibacterium acnes HL038PA1]
gi|315105108|gb|EFT77084.1| recombination protein RecR [Propionibacterium acnes HL050PA2]
gi|315107697|gb|EFT79673.1| recombination protein RecR [Propionibacterium acnes HL030PA1]
gi|315109894|gb|EFT81870.1| recombination protein RecR [Propionibacterium acnes HL030PA2]
gi|327331272|gb|EGE73011.1| recombination protein RecR [Propionibacterium acnes HL096PA2]
gi|327333905|gb|EGE75622.1| recombination protein RecR [Propionibacterium acnes HL096PA3]
gi|327444626|gb|EGE91280.1| recombination protein RecR [Propionibacterium acnes HL013PA2]
gi|327447350|gb|EGE94004.1| recombination protein RecR [Propionibacterium acnes HL043PA1]
gi|327450462|gb|EGE97116.1| recombination protein RecR [Propionibacterium acnes HL043PA2]
gi|327457182|gb|EGF03837.1| recombination protein RecR [Propionibacterium acnes HL092PA1]
gi|328758130|gb|EGF71746.1| recombination protein RecR [Propionibacterium acnes HL020PA1]
gi|328761181|gb|EGF74723.1| recombination protein RecR [Propionibacterium acnes HL099PA1]
gi|332674612|gb|AEE71428.1| recombination protein RecR [Propionibacterium acnes 266]
Length = 201
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC NV +
Sbjct: 6 LQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICFNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D+ I+
Sbjct: 66 EVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPADLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 126 LCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|71065354|ref|YP_264081.1| recombination protein RecR [Psychrobacter arcticus 273-4]
gi|123649110|sp|Q4FTL1|RECR_PSYA2 RecName: Full=Recombination protein recR
gi|71038339|gb|AAZ18647.1| DNA replication and repair protein RecR [Psychrobacter arcticus
273-4]
Length = 197
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 118/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ + L+K L +PG G +SA+R LHL+ KK LA+A+ + C C +
Sbjct: 5 KFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSFSD 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C +C D +RD +++ VVE AD+ A+E++ Y VLGG LSP+D I +D+ I+
Sbjct: 65 DAVCPLCQDPRRDDALLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDLNIE 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + + ELI A T+EGQTTAH+I + + K+TRLA G+PMG EL+YLD
Sbjct: 125 QLVWRVKQEPVEELILATGTTVEGQTTAHFINEAVSRHVNKVTRLAQGVPMGGELEYLDS 184
Query: 189 GTIFEAIRSRTVL 201
T+ +A+++R+ L
Sbjct: 185 MTLGQAMQNRSFL 197
>gi|325288354|ref|YP_004264535.1| DNA replication and repair protein RecR [Syntrophobotulus
glycolicus DSM 8271]
gi|324963755|gb|ADY54534.1| DNA replication and repair protein RecR [Syntrophobotulus
glycolicus DSM 8271]
Length = 198
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + +LI +R+PG GP++A R + ++ ++ G L++A++ + CSICGN
Sbjct: 8 QPLADLIAAFSRLPGIGPKTAGRLAFYALQHADEATG-LSKAISAALKDIRYCSICGNYT 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+DPC IC +R+ ++ VVE D+ ALE++ LYHVL G LSP++ IGPE + I
Sbjct: 67 DSDPCRICSSPKRNREILCVVEQSRDVVALEKTGEYKGLYHVLHGVLSPMEGIGPEQLNI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+E + E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G++L+Y D
Sbjct: 127 GGLLSRLE--GVSEIVIAVNPTVEGEATALYLARLLKPLQIKVTRIAHGLPVGADLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ TI A+ R L
Sbjct: 185 EVTIARALEGRRPL 198
>gi|86738985|ref|YP_479385.1| recombination protein RecR [Frankia sp. CcI3]
gi|123751565|sp|Q2JGD6|RECR_FRASC RecName: Full=Recombination protein recR
gi|86565847|gb|ABD09656.1| DNA replication and repair protein RecR [Frankia sp. CcI3]
Length = 199
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + LA A+ + KV C C NV +
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLAADPVDVRRLATALTEVKEKVQFCRSCFNVAQS 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I+
Sbjct: 66 ELCRICSDPRRDPSSICVVEEPKDVVAIERTREFRGRYHVLGGAINPIGGVGPDDLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A EG+ TA Y+ ++ + +K+TRLA G+PMG +L++ D+
Sbjct: 126 LVARLADGTVTELILATDPNTEGEVTASYLARQIAPMGLKVTRLASGLPMGGDLEWADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 186 TLGRAFEGRRVV 197
>gi|50903606|gb|AAT87321.1| RecR [Streptococcus pyogenes MGAS10394]
Length = 228
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 37 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDD 96
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 97 DPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 156
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 157 LITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 216
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 217 TLLRAIENRTEL 228
>gi|121607504|ref|YP_995311.1| recombination protein RecR [Verminephrobacter eiseniae EF01-2]
gi|171769526|sp|A1WF86|RECR_VEREI RecName: Full=Recombination protein recR
gi|121552144|gb|ABM56293.1| DNA replication and repair protein RecR [Verminephrobacter eiseniae
EF01-2]
Length = 196
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L R+PG G +SA+R HL++ LA+A+ + V C+ C
Sbjct: 7 LDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGGQALAQALHDALGSVQHCARCHTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C+D RDA+ + VVE AD ALER+ A LY VL G LSPLD +GP++IG+Q
Sbjct: 67 ETCRTCLDPGRDATRLCVVETPADQAALERTGAFKGLYFVLMGRLSPLDGVGPKEIGLQK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R ++E+I A + EG+ TAH I LK + +TRLA G+P+GSEL+Y+D G
Sbjct: 127 LIARATEGGVQEVILATNFHAEGEATAHVISQALKRQGLHVTRLARGVPVGSELEYVDLG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIAHALVDR 195
>gi|227536698|ref|ZP_03966747.1| recombination protein RecR [Sphingobacterium spiritivorum ATCC
33300]
gi|227243499|gb|EEI93514.1| recombination protein RecR [Sphingobacterium spiritivorum ATCC
33300]
Length = 204
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 118/195 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K ++ + R+PG G ++A R LHL+K+ + + A+ + ++ C C
Sbjct: 2 EFSSKLLQQAVDEFGRLPGIGQKTALRLVLHLLKQSDGEVLRFTGALNQLKEQIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C C +RD S+I VVED D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 FNISDHDICETCSSLKRDKSLICVVEDTRDVMAIENTNQYQGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L++R+ ++E+I A+SAT+EG TT Y+ KLK D++I+ +A GI G EL
Sbjct: 122 DLKIEGLVQRLRAGHVKEVILALSATMEGDTTIFYLYRKLKEFDIQISTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEITLGRSIATR 196
>gi|257468026|ref|ZP_05632122.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185]
gi|317062312|ref|ZP_07926797.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185]
gi|313687988|gb|EFS24823.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185]
Length = 197
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 115/191 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H+++ E+ + +EAM + + C +CG+
Sbjct: 4 KSLERLIDEFNKLPGIGRKSATRLAFHILEMSEEQVEKFSEAMKEVKKTIKKCPVCGDFC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D+ RD ++ VVED D+ + E++ N YHVL G ++PL+ + P+ + I
Sbjct: 64 ENDLCNICADETRDKEIVCVVEDSRDIISFEKTGKYNGTYHVLNGKIAPLNGMTPDKLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ I E+I A++ +EG+TT+ Y+ LK VKIT++A GIP+G +++ D
Sbjct: 124 KSLLERVAATDINEVILALNPDLEGETTSLYLTKLLKPFGVKITKIASGIPIGGNIEFAD 183
Query: 188 DGTIFEAIRSR 198
TI +A+ R
Sbjct: 184 TATISKALDGR 194
>gi|148543565|ref|YP_001270935.1| recombination protein RecR [Lactobacillus reuteri DSM 20016]
gi|184152972|ref|YP_001841313.1| recombination protein RecR [Lactobacillus reuteri JCM 1112]
gi|194468112|ref|ZP_03074098.1| recombination protein RecR [Lactobacillus reuteri 100-23]
gi|227363475|ref|ZP_03847597.1| recombination protein RecR [Lactobacillus reuteri MM2-3]
gi|325681915|ref|ZP_08161433.1| recombination protein R [Lactobacillus reuteri MM4-1A]
gi|172048231|sp|A5VIC4|RECR_LACRD RecName: Full=Recombination protein recR
gi|229470338|sp|B2G5V1|RECR_LACRJ RecName: Full=Recombination protein recR
gi|148530599|gb|ABQ82598.1| DNA replication and repair protein RecR [Lactobacillus reuteri DSM
20016]
gi|183224316|dbj|BAG24833.1| recombination protein RecR [Lactobacillus reuteri JCM 1112]
gi|194452965|gb|EDX41863.1| recombination protein RecR [Lactobacillus reuteri 100-23]
gi|227071489|gb|EEI09790.1| recombination protein RecR [Lactobacillus reuteri MM2-3]
gi|324978559|gb|EGC15508.1| recombination protein R [Lactobacillus reuteri MM4-1A]
Length = 200
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++PG G ++A R + + +E + A+++ + + CSICGN+
Sbjct: 8 LAKLIESYTKLPGIGQKTATRLAFYTLSMQEDDVTNFAKSLLSAKRDLHNCSICGNITED 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE D+ A+ER + LYHVL G +SP+ GPEDI I S
Sbjct: 68 DPCPICRDKTRDHSQILVVEQSQDVMAMERMHEYHGLYHVLHGVISPVAGTGPEDINITS 127
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ +++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++DY D+
Sbjct: 128 LLKRLKKDDEVKEIIIATNASSDGELTAGYLAKLIKPAGIKVTRLAHGLSVGADIDYADE 187
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 188 MTLFKAVQGRT 198
>gi|304437631|ref|ZP_07397585.1| recombination protein R [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369374|gb|EFM23045.1| recombination protein R [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 198
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG G ++A R H++ + LA A+ K+ CS+C N+ +
Sbjct: 7 LAQLIEQLRTLPGIGAKTATRLAYHILDMDMERAHRLAAAITGAKEKIGFCSVCFNLTDS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC+ ++RD + I VVE D+ A+ER + +YHVL G+LSPL+ +GP DI I+
Sbjct: 67 DPCAICMAEKRDHTTICVVEQPQDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDIRIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R + ++E+I A + +EG+ TA YI LK + +++TR+A+G+P+G +L+Y D+
Sbjct: 127 LVLRAGKENVQEVIVATNPNVEGEATAMYIAKLLKPMGIRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 187 TLSRAMENR 195
>gi|313895449|ref|ZP_07829006.1| recombination protein RecR [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976344|gb|EFR41802.1| recombination protein RecR [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 198
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ +PG G ++A R H++ + LA A+ K+ CS C N+ T
Sbjct: 7 LTQLMEQFRALPGIGAKTAARLAYHVLDMDMERAQRLASAIVEAKRKIGFCSTCFNLTDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC ++RD SV+ VVE D+ A+ER + +YHVL G+LSPL+ +GP D+ I+
Sbjct: 67 DPCVICTAEKRDHSVVCVVEQPPDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDLRIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 127 LVTRVGTTDVQEVIMATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 187 TLSRAMENR 195
>gi|94994663|ref|YP_602761.1| recombination protein RecR [Streptococcus pyogenes MGAS10750]
gi|94548171|gb|ABF38217.1| Recombination protein recR [Streptococcus pyogenes MGAS10750]
Length = 231
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 40 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDD 99
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 100 DPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 159
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 160 LITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 219
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 220 TLLRAIENRTEL 231
>gi|320159546|ref|YP_004172770.1| recombination protein RecR [Anaerolinea thermophila UNI-1]
gi|319993399|dbj|BAJ62170.1| recombination protein RecR [Anaerolinea thermophila UNI-1]
Length = 201
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 119/194 (61%), Gaps = 2/194 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV--D 67
+E LI R+PG GP++A R ++++ +++ LAEA+ + ++ C +C N+
Sbjct: 8 LEALITAFERLPGIGPKTASRLAFFILRQPDEVAQQLAEALLAVKSQTANCPVCFNIMLA 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D +RD S + VVED D+ +ER+ YHVL G L+P++ IGPE + I
Sbjct: 68 GQERCQICADPRRDESQLCVVEDPLDVLVIERTGGFLGRYHVLQGVLNPIEGIGPEQLRI 127
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LIER++ ++RE+I A + ++EG TA Y+ +L + V+ITRLA G+PMG +L+Y D
Sbjct: 128 RPLIERVQEGRVREVIIATNPSMEGDATALYLRQQLAPLGVRITRLARGLPMGGDLEYAD 187
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 188 QNTLLRALAGRQEL 201
>gi|229825855|ref|ZP_04451924.1| hypothetical protein GCWU000182_01219 [Abiotrophia defectiva ATCC
49176]
gi|229789875|gb|EEP25989.1| hypothetical protein GCWU000182_01219 [Abiotrophia defectiva ATCC
49176]
Length = 199
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 125/195 (64%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
GK++ L++ L+++PG G ++A R H++ ++ + L+ A++ VC C C +
Sbjct: 5 GKQVNKLVEELSKLPGIGVKTAGRLAFHIIGMPKENVEALSLAISQAKENVCYCKECFTL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D++R+ ++I+VVE+V DL A E++K + +YHVL G +SPL IGP DI
Sbjct: 65 TDSPLCPICADKERNHNMIMVVENVRDLAAYEKTKKYDGVYHVLHGVISPLLGIGPADIK 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ R++ + E+I A +++EG+TTA YI +K +K+TR+A G+P+G +L+ +
Sbjct: 125 LKELMVRLQNNDVEEVIIATGSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLENI 184
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A RTVL
Sbjct: 185 DEVTLLRAFVGRTVL 199
>gi|256820997|ref|YP_003142276.1| recombination protein RecR [Capnocytophaga ochracea DSM 7271]
gi|256582580|gb|ACU93715.1| recombination protein RecR [Capnocytophaga ochracea DSM 7271]
Length = 206
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 116/194 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + +A++P G R+A R LHL+K+ E+ LA+A+ + + C C
Sbjct: 3 FSSKLLENAVYEIAQLPSIGKRTALRLALHLLKQPEEQSLQLAQAIVALRTHIQYCKNCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC + RD V+ VVED D+ A+E + YHVLGG +SP+D I P +
Sbjct: 63 NISDVDLCEICANPMRDTGVVCVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAPSN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SLIE+++ K+ ELI A+S T+EG TT YI +++ + I+ +A GI +G EL+
Sbjct: 123 LHIASLIEKVKTGKVTELILALSNTMEGDTTNFYIYKQVESYHITISTIARGIAVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I R
Sbjct: 183 YTDEVTLGRSITQR 196
>gi|253583496|ref|ZP_04860694.1| recombination protein recR [Fusobacterium varium ATCC 27725]
gi|251834068|gb|EES62631.1| recombination protein recR [Fusobacterium varium ATCC 27725]
Length = 197
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 115/191 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H+++ E+ + +EAM + + C +CG+
Sbjct: 4 KSLERLIDEFNKLPGIGRKSATRLAFHILEMSEEQVEKFSEAMKEVKKTIKKCPVCGDFC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D+ RD ++ VVED D+ + E++ N YHVL G ++PL+ + P+ + I
Sbjct: 64 ENDLCNICADETRDKEIVCVVEDSRDIISFEKTGKYNGTYHVLNGKIAPLNGMTPDKLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ I E+I A++ +EG+TT+ Y+ LK VKIT++A GIP+G +++ D
Sbjct: 124 KSLLERVAATDISEVILALNPDLEGETTSLYLTKLLKPFGVKITKIASGIPIGGNIEFAD 183
Query: 188 DGTIFEAIRSR 198
TI +A+ R
Sbjct: 184 TATISKALDGR 194
>gi|284928920|ref|YP_003421442.1| DNA replication and repair protein RecR [cyanobacterium UCYN-A]
gi|284809379|gb|ADB95084.1| DNA replication and repair protein RecR [cyanobacterium UCYN-A]
Length = 185
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP+SA+R +++K E + A+A+ N + LC+ C + C IC
Sbjct: 1 MQRLPGIGPKSAQRLAFYILKLPESEVQAFAKALINAKQRTGLCTKCFHFSEKPICEICS 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ RD+++I VV D D+ ALE+++ +YHVLGG +SP+D IGPE + ++ L+ R+
Sbjct: 61 NTNRDSNLICVVADSRDVIALEKTREYKGMYHVLGGIMSPIDGIGPEQLNVEPLVRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+ I+E+I AIS T+EG+T Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+
Sbjct: 121 ENIKEVILAISPTVEGETMTLYLCQVLKAF-TKVTRIAFGLPVGGDLEYTDEITLARALA 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRQEL 184
>gi|254448821|ref|ZP_05062277.1| recombination protein RecR [gamma proteobacterium HTCC5015]
gi|198261511|gb|EDY85800.1| recombination protein RecR [gamma proteobacterium HTCC5015]
Length = 199
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 112/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ +PG GP+SA+R H ++++ LA + ++ C C N
Sbjct: 7 LNELIEAFRCLPGVGPKSAQRMAFHALERERGRAKHLALVLQQAVERIGHCQRCRNFTEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C++C +RD SV+ +VE AD+ ALE + N LY VL G LSPLD IGP+DIG+
Sbjct: 67 AVCSLCESPRRDGSVLCIVESPADVSALEDATDYNGLYFVLMGRLSPLDGIGPKDIGLDQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ +RELI A + T+EG+ TAHYI + V ++R+A+G+P+G EL+Y+D G
Sbjct: 127 LEQRLSDGSVRELILATNPTVEGEATAHYISELAAEAKVAVSRIAHGVPLGGELEYIDGG 186
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 TLSHAFSQRLRL 198
>gi|314965632|gb|EFT09731.1| recombination protein RecR [Propionibacterium acnes HL082PA2]
Length = 201
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC NV +
Sbjct: 6 LQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICFNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D+ I+
Sbjct: 66 EVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPADLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 126 LCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|222153386|ref|YP_002562563.1| recombination protein RecR [Streptococcus uberis 0140J]
gi|254790787|sp|B9DUS1|RECR_STRU0 RecName: Full=Recombination protein recR
gi|222114199|emb|CAR42745.1| recombination protein RecR [Streptococcus uberis 0140J]
Length = 198
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSVCGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD S+I+VVED D+ A+E+ + + YHVL G +SP++ +GP+DI +++
Sbjct: 67 DPCSICTDPSRDKSMILVVEDSKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSDVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|297543596|ref|YP_003675898.1| recombination protein RecR [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841371|gb|ADH59887.1| recombination protein RecR [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 199
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 121/186 (65%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L+++PG GP++A+R ++ + + L++++ + K+ C IC N+ T+ C
Sbjct: 11 LIEELSKLPGIGPKTAQRLAFFIINMPTEEVKSLSQSIIDAKEKIKYCKICYNITDTEVC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ IGPEDI I+ L++
Sbjct: 71 NICSDEERDNSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGIGPEDIKIKELLD 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ ++E+I A + IEG+ TA YI LK + VK+TR+A+G+P+G +L+Y D T+
Sbjct: 131 RVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGVKVTRIAHGVPVGGDLEYTDVVTLS 190
Query: 193 EAIRSR 198
A+ R
Sbjct: 191 RALEGR 196
>gi|315925751|ref|ZP_07921958.1| recombination protein R [Pseudoramibacter alactolyticus ATCC 23263]
gi|315620860|gb|EFV00834.1| recombination protein R [Pseudoramibacter alactolyticus ATCC 23263]
Length = 200
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 123/191 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E L+ L+++PG G ++A+R HL+ ++ + L+ A+ ++ K+ LC +C ++
Sbjct: 6 KAVERLVAELSKLPGIGEKTAQRLAFHLIDAPKEDIAGLSRALLDVKEKIKLCPVCFSIT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D RD SV+ VVE+ D++A+ER++ + LYHVL G +SPL+ IGP+DI
Sbjct: 66 DGDRCDICADASRDRSVLCVVENTRDIYAIERTREYHGLYHVLHGVISPLEGIGPQDIKA 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + E+I A + T EG+ TA Y+ + + + V +TRLA GIP+G+++++ D
Sbjct: 126 RELMLRLADGTVTEVIMATNPTPEGEATAVYLGNLITPMGVTVTRLAKGIPIGADVEFTD 185
Query: 188 DGTIFEAIRSR 198
+ T+ +A R
Sbjct: 186 EVTLIKAFEGR 196
>gi|329666791|gb|AEB92739.1| recombination protein RecR [Lactobacillus johnsonii DPC 6026]
Length = 199
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDSNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGILSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|15828252|ref|NP_302515.1| recombination protein RecR [Mycobacterium leprae TN]
gi|221230729|ref|YP_002504145.1| recombination protein RecR [Mycobacterium leprae Br4923]
gi|6093948|sp|O69520|RECR_MYCLE RecName: Full=Recombination protein recR
gi|3150109|emb|CAA19161.1| recombination protein RecR [Mycobacterium leprae]
gi|13093945|emb|CAC31845.1| DNA repair protein [Mycobacterium leprae]
gi|219933836|emb|CAR72427.1| DNA repair protein [Mycobacterium leprae Br4923]
Length = 203
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI L ++PG GP+SA+R HL+ + Q + L + + + V C++CGNV
Sbjct: 6 VQNLIDELGKLPGIGPKSAQRIAFHLLSVEPQDIDRLTAVLVKVRDDVRFCTVCGNVSDD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDASV+ VVE+ D+ A+ER++ YHVLGG+L PL IGPE + I+
Sbjct: 66 ERCRICSDTRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ I E+I A EG+ TA Y++ L+ + + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVGITEVIIATDPNTEGEATATYLVRMLRDMPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALTGRRTM 202
>gi|228478357|ref|ZP_04062965.1| recombination protein RecR [Streptococcus salivarius SK126]
gi|228250036|gb|EEK09306.1| recombination protein RecR [Streptococcus salivarius SK126]
Length = 198
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 7 IAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCNICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVDEIIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|163857864|ref|YP_001632162.1| recombination protein RecR [Bordetella petrii DSM 12804]
gi|229890129|sp|A9HZ10|RECR_BORPD RecName: Full=Recombination protein recR
gi|163261592|emb|CAP43894.1| recombination protein RecR [Bordetella petrii]
Length = 202
Score = 150 bits (380), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 113/187 (60%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L R+PG G RSARR HL++ Q L A+A + C+ C + D
Sbjct: 13 SLIEALRRLPGVGVRSARRMAYHLMQHDLQGADMLGRALAGAVQNLRHCARCNSFTEDDI 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
CA C + +RD SV+ VVE AD +E S LY+VL G ++PL+ IGP ++ Q L+
Sbjct: 73 CATCANPKRDPSVLCVVETPADQNMIEASHGYRGLYYVLMGRVAPLEGIGPRELDFQRLL 132
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
ER +RE+I A + T EG+TTAH++ + L G +K+TRLA G+P GSEL+Y+D GTI
Sbjct: 133 ERASDGVVREVILATNFTAEGETTAHFLGEVLAGKGLKVTRLARGVPAGSELEYVDAGTI 192
Query: 192 FEAIRSR 198
A+ R
Sbjct: 193 AWALMER 199
>gi|139473554|ref|YP_001128270.1| recombination protein RecR [Streptococcus pyogenes str. Manfredo]
gi|166223507|sp|A2RDV9|RECR_STRPG RecName: Full=Recombination protein recR
gi|134271801|emb|CAM30034.1| recombination protein RecR [Streptococcus pyogenes str. Manfredo]
Length = 198
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD + I+VVED D+ A+E+ + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYRGYYHVLHGLISPMNGMGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|297565807|ref|YP_003684779.1| recombination protein RecR [Meiothermus silvanus DSM 9946]
gi|296850256|gb|ADH63271.1| recombination protein RecR [Meiothermus silvanus DSM 9946]
Length = 205
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 9/193 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ LA +PG GP++A++ L+LV +K+ LA A C ICGN+ + C
Sbjct: 10 LVRALAVLPGVGPKTAQKLGLYLVMQKDAAQELLAALDAAQALHPC--PICGNLAEDELC 67
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D+ R+ +++ VVE V DL A+ERS + LYHVLGG+L+PL+ IGPE + + S +
Sbjct: 68 PICADEHRERNLVCVVESVGDLMAIERSGEYSGLYHVLGGALNPLEGIGPEQLNLGSFYK 127
Query: 133 RIEVK-------KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
R++ + K+ E+I A S T+EG+ TA Y+ D LK +K TRLAYG+P+G L+Y
Sbjct: 128 RLQPENPEALGAKVEEIILATSMTVEGEATAAYLADMLKERGIKATRLAYGLPVGGSLEY 187
Query: 186 LDDGTIFEAIRSR 198
D+ T+ A+ +R
Sbjct: 188 ADEVTLARALENR 200
>gi|292669038|ref|ZP_06602464.1| recombination protein R [Selenomonas noxia ATCC 43541]
gi|292649293|gb|EFF67265.1| recombination protein R [Selenomonas noxia ATCC 43541]
Length = 198
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ +PG G ++A R H++ + LA A+ K+ CS C N+ +
Sbjct: 7 LTQLIEQFRTLPGIGAKTAARLAYHVLDMDMERARRLASAIVEAKEKIGFCSTCFNLTDS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC+ ++RD ++I VVE D+ A+ER + +YHVL G+LSP++ IGP DI I+
Sbjct: 67 DPCAICMAEKRDHTMICVVEQPPDVAAMERMNDYDGVYHVLHGALSPIEGIGPNDIRIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 127 LVTRVGTTDVEEVIVATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 187 TLSRAMENR 195
>gi|172046636|sp|Q3AJ44|RECR_SYNSC RecName: Full=Recombination protein recR
Length = 191
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C ++ C
Sbjct: 4 LIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFHLSADPEC 63
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R VI VV D DL ALER++ + YHVLGG +SP+D IGPE + + L++
Sbjct: 64 EICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELVQ 123
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D+ T+
Sbjct: 124 RISNEEISEVILALTPSVEGDTTSLYLGRLLKPF-CSVSRIAYGLPMGSELEYADEVTLS 182
Query: 193 EAIRSR 198
A+ R
Sbjct: 183 RALEGR 188
>gi|302336479|ref|YP_003801686.1| DNA replication and repair protein RecR [Olsenella uli DSM 7084]
gi|301320319|gb|ADK68806.1| DNA replication and repair protein RecR [Olsenella uli DSM 7084]
Length = 207
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 122/192 (63%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ ++ L+ L R+PG GP+SA+R L++ + L+ A+ + +V C +C +
Sbjct: 13 GRALQRLLDELGRLPGIGPKSAQRIAYWLLEADVEAARRLSGAIMQVKQQVHFCPVCFSY 72
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T D C +C D RD I VV + D+ A+ER+ A + LYHVLGG +SP+D+IGP+ +
Sbjct: 73 ATRDTCDVCADLSRDRGTICVVSEPRDVSAIERTGAYHGLYHVLGGVISPMDKIGPDQLH 132
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L++R+ + ++E+I A + +EG+TTA Y+ ++ + V ++RLA G+P+G +L+Y
Sbjct: 133 VKELLQRLADESVKEVILATNPDVEGETTATYLSRVIRPLGVAVSRLASGLPVGGDLEYA 192
Query: 187 DDGTIFEAIRSR 198
D+ T+ AI +R
Sbjct: 193 DEVTLGRAIEAR 204
>gi|24379076|ref|NP_721031.1| recombination protein RecR [Streptococcus mutans UA159]
gi|73621519|sp|Q8DV99|RECR_STRMU RecName: Full=Recombination protein recR
gi|24376974|gb|AAN58337.1|AE014903_13 putative recombination protein RecM [Streptococcus mutans UA159]
Length = 199
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + ++ + A+ + ++ CS+CGN+
Sbjct: 7 IAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAAKRELTYCSVCGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVED D+ A+E+ + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 DPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGIGPDDINLKS 126
Query: 130 LIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + I E+I A +AT +G+ TA YI LK + +TRLA G+ +GS+++Y D+
Sbjct: 127 LLTRLRDNSDIHEVIIATNATADGEATAMYISRVLKPAGITVTRLARGLAVGSDIEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 VTLLRAIENRTEL 199
>gi|300087578|ref|YP_003758100.1| recombination protein RecR [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527311|gb|ADJ25779.1| recombination protein RecR [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 203
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 116/195 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K T + L ++L R+PG GP+SA+R + H++K + + LA+A+ + + LC C
Sbjct: 6 KSTAAAVNRLTEVLGRLPGIGPKSAQRLSYHILKASAEQVRELADALVCVKQQTRLCRTC 65
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C+IC +RD S I VVE D+ LE + YHVL G++SP + +G
Sbjct: 66 WNIADGDTCSICASPERDTSRICVVEQPQDMLTLEHTGIYKGGYHVLHGAISPSEGVGTA 125
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI + L+ R+E + E+I A +A +EG+TTA Y+ + + +++TRLA G+P G E+
Sbjct: 126 DIRLAELMSRLESGMVTEVIVATNANVEGETTAMYLQRLIAPLGIRVTRLARGLPFGGEI 185
Query: 184 DYLDDGTIFEAIRSR 198
+Y DD T+ A+ +R
Sbjct: 186 EYADDVTLSRALENR 200
>gi|254284041|ref|ZP_04959009.1| recombination protein RecR [gamma proteobacterium NOR51-B]
gi|219680244|gb|EED36593.1| recombination protein RecR [gamma proteobacterium NOR51-B]
Length = 201
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 116/190 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE LI+ L +PG GP+SA+R TL L+++ + LA+A+ +V C C N
Sbjct: 7 IEALIEALRCLPGVGPKSAQRMTLTLLERDREGAALLAQALTTALERVGRCQRCRNFTEL 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD +++ VVE AD+ A+E S + ++ VL G LSP+D IGPE+IG+
Sbjct: 67 PVCEICADPRRDQALLCVVETPADVMAIEHSGSYRGVFFVLMGHLSPIDGIGPEEIGLTE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R + E+I A + T+EG+TTA+YI + + V I+++A+G+P+G EL++ D
Sbjct: 127 LASRFHEGDLAEVILATNPTVEGETTAYYIAQQARSAGVTISKIAHGVPLGGELEFTDAT 186
Query: 190 TIFEAIRSRT 199
T+ A+ RT
Sbjct: 187 TLAHALSGRT 196
>gi|251772824|gb|EES53384.1| recombination protein RecR [Leptospirillum ferrodiazotrophum]
Length = 215
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 124/206 (60%), Gaps = 8/206 (3%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + ++L+ + R+PG G ++A R HL++ E LA A++ + ++ C
Sbjct: 7 MGSSLFPAPFQDLVDLFRRLPGIGTKTATRLAFHLLQSSESERQELASAVSTLKERLLPC 66
Query: 61 SICGNV--------DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG 112
S C N+ CAIC+D RD++++IVVED+ L+++E+S YHVL G
Sbjct: 67 SECRNIVASPPPESPEVPRCAICLDPARDSTILIVVEDIQTLYSIEKSGEFRGRYHVLEG 126
Query: 113 SLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITR 172
LSPL+ I PE + ++ L++R+E IRE++ A S T +G+ TA Y+ +K + ++++R
Sbjct: 127 RLSPLEGIAPEMLRVRELLQRLENPDIREVVLATSPTTDGEATALYLSRLVKPLGIRVSR 186
Query: 173 LAYGIPMGSELDYLDDGTIFEAIRSR 198
+A+GIP+G EL+Y+D+ T+ A+ R
Sbjct: 187 IAFGIPVGLELEYVDEVTLIRAVEGR 212
>gi|257438603|ref|ZP_05614358.1| recombination protein RecR [Faecalibacterium prausnitzii A2-165]
gi|257198947|gb|EEU97231.1| recombination protein RecR [Faecalibacterium prausnitzii A2-165]
Length = 199
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ ++ PG G + A R ++ +Q LA A+ N + K+ C +C N
Sbjct: 8 LEKLIEEFSKFPGIGRKGATRMAYQVLSMSDQDAAALAGAIQNAHTKLHRCRVCQNYTEA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +RD SVI VVE D+ A ER++ + +YHVL G +SP+D IG E + ++
Sbjct: 68 ELCPICASAKRDRSVICVVETPRDVQAFERTREYHGMYHVLHGLISPMDGIGAEQLTVKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G+ L+Y D+
Sbjct: 128 LLARLGDGEVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGASLEYTDET 187
Query: 190 TIFEAIRSRTVL 201
T++ A+ R L
Sbjct: 188 TLYRALSGRGEL 199
>gi|167038578|ref|YP_001666156.1| recombination protein RecR [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116973|ref|YP_004187132.1| recombination protein RecR [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326390314|ref|ZP_08211873.1| recombination protein RecR [Thermoanaerobacter ethanolicus JW 200]
gi|229470344|sp|B0K800|RECR_THEP3 RecName: Full=Recombination protein recR
gi|166857412|gb|ABY95820.1| recombination protein RecR [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319930064|gb|ADV80749.1| recombination protein RecR [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|325993591|gb|EGD52024.1| recombination protein RecR [Thermoanaerobacter ethanolicus JW 200]
Length = 199
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L+++PG GP++A+R ++ + + L++A+ + K+ C IC N+ T
Sbjct: 8 IAKLIEELSKLPGIGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRICYNITDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GPEDI I+
Sbjct: 68 EVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPEDIKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L+Y D
Sbjct: 128 LLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGDLEYTDVV 187
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 188 TLSRALEGR 196
>gi|289577300|ref|YP_003475927.1| recombination protein RecR [Thermoanaerobacter italicus Ab9]
gi|289527013|gb|ADD01365.1| recombination protein RecR [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 121/186 (65%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L+++PG GP++A+R ++ + + L++++ + K+ C IC N+ T+ C
Sbjct: 11 LIEELSKLPGIGPKTAQRLAFFIINMPIEEVKSLSQSIIDAKEKIKYCKICYNITDTEVC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ IGPEDI I+ L++
Sbjct: 71 NICNDEERDNSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGIGPEDIKIKELLD 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ ++E+I A + IEG+ TA YI LK + VK+TR+A+G+P+G +L+Y D T+
Sbjct: 131 RVKNGNVKEVILATNPDIEGEATAMYIAKLLKSLGVKVTRIAHGVPVGGDLEYTDVVTLS 190
Query: 193 EAIRSR 198
A+ R
Sbjct: 191 RALEGR 196
>gi|291545136|emb|CBL18245.1| recombination protein RecR [Ruminococcus sp. 18P13]
Length = 200
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 120/187 (64%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A++PG G ++A+R +++ E + A+A+ ++V C+IC N+ + C
Sbjct: 12 LAEQFAKLPGIGMKTAQRLAYYVMSMSESDVQAFADAILQAKHRVHNCAICQNLTEQEVC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD S+I VVE D+ A ER+ N YHVL G +SPLD + P+D+ I+SL+
Sbjct: 72 PICGDDRRDHSIICVVESPKDVTAFERTGEYNGTYHVLHGLISPLDGVSPDDLEIRSLLA 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + + E+I A + T+EG+ TA YI LK + VK++RLA+G+P+G L+Y D+ T++
Sbjct: 132 RLQSEPVTEVIMATNPTVEGEATAMYIARLLKPMGVKVSRLAFGLPIGGILEYADEVTLY 191
Query: 193 EAIRSRT 199
+A+ +R
Sbjct: 192 KALENRN 198
>gi|149278408|ref|ZP_01884545.1| recombination protein [Pedobacter sp. BAL39]
gi|149230778|gb|EDM36160.1| recombination protein [Pedobacter sp. BAL39]
Length = 205
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 117/195 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E+ + +R+PG G ++A R LHL+ K+++ + + + ++ CS C
Sbjct: 2 NFSSKLLEDAVNEFSRLPGVGQKTALRLVLHLLGKEQEEVTNFGNTIIRLRQEIKHCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC +R+ +I VVED D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 HNISDQEICEICASSKRNKEIICVVEDTRDVMAVENTSQYFGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL++R+ ++E+I A+SAT+EG TT Y+ +LK + IT +A GI G EL
Sbjct: 122 DLYIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSIVTR 196
>gi|289643262|ref|ZP_06475387.1| recombination protein RecR [Frankia symbiont of Datisca glomerata]
gi|289506902|gb|EFD27876.1| recombination protein RecR [Frankia symbiont of Datisca glomerata]
Length = 200
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + LA + I +KV C C NV
Sbjct: 8 VQDLIDELGRLPGIGPKSAQRIAFHLLSADPVDVRRLAATLNEIKDKVRFCRTCFNVAQA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I+
Sbjct: 68 ELCRICADHRRDPAQICVVEEPKDVVAVERTREFRGRYHVLGGAINPIGGVGPDDLHIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + ELI A EG+ TA Y+ ++ + +K+TRLA G+PMG +L++ D+
Sbjct: 128 LIARLADGTVTELILATDPNTEGEVTASYLARQIAPMGLKVTRLASGLPMGGDLEWADEV 187
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 188 TLGRAFEGRRVV 199
>gi|255658594|ref|ZP_05404003.1| recombination protein RecR [Mitsuokella multacida DSM 20544]
gi|260849401|gb|EEX69408.1| recombination protein RecR [Mitsuokella multacida DSM 20544]
Length = 198
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ NLI+ +PG G ++A R H++ LA A+ + K+ C+ C N+
Sbjct: 7 LANLIEHFRALPGIGQKTAVRLAYHVLDMDPAQARALASAIIDAKEKIGYCNTCFNLSDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+PCAIC +RD SVI VVE D+ A+ER + +YHVL G+LSPL+ IGP DI I+
Sbjct: 67 NPCAICASDERDHSVICVVEQPQDVAAMERMRDYQGVYHVLHGALSPLEGIGPSDIRIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ ++E+I A + +EG+ T YI LK + +K+TR+A+G+P+G +L+Y D+
Sbjct: 127 LLGRLQDDTVKEVIMATNPNVEGEATTMYIAKLLKPLGIKVTRIAHGLPIGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ +A+ +R
Sbjct: 187 TLAKAMENR 195
>gi|111220097|ref|YP_710891.1| recombination protein RecR [Frankia alni ACN14a]
gi|122954652|sp|Q0RT19|RECR_FRAAA RecName: Full=Recombination protein recR
gi|111147629|emb|CAJ59284.1| recombination and repair protein [Frankia alni ACN14a]
Length = 199
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + LA A+ + +KV C C NV +
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLAADPVDVRRLATALTEVKDKVRFCRSCFNVAQS 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I+
Sbjct: 66 ELCRICADPRRDQALICVVEEPKDVVAIERTREFRGRYHVLGGAINPIGGVGPDDLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A EG+ TA Y+ ++ + +++TRLA G+PMG +L++ D+
Sbjct: 126 LVARLADGTVTELILATDPNTEGEVTASYLARQIGPMGLRVTRLASGLPMGGDLEWADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 186 TLGRAFEGRRVV 197
>gi|225026636|ref|ZP_03715828.1| hypothetical protein EUBHAL_00887 [Eubacterium hallii DSM 3353]
gi|224956006|gb|EEG37215.1| hypothetical protein EUBHAL_00887 [Eubacterium hallii DSM 3353]
Length = 199
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 119/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I NLI+ L R+PG G +SA+R H++ E+ + LA+ + K+ C C +
Sbjct: 7 QITNLIEELRRLPGIGSKSAQRLAFHIINMPEEHVHHLAQTLVTAREKIRYCKYCCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
++ C IC +RD S I+VVE DL A E++ + +YHVL G+L+P GP+DI +
Sbjct: 67 SEVCPICASTKRDHSTIMVVEHTQDLAAYEKTGQYHGVYHVLQGTLAPSLGKGPDDIRFK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ +++ELI A +++++G+ TA YI K+K +K+TR+A G+P+G EL+Y+D+
Sbjct: 127 ELEERLNNPEVKELILATNSSLDGEATAMYITKKVKPRGIKVTRIASGVPIGGELEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLSRALDGRVEL 199
>gi|55820693|ref|YP_139135.1| recombination protein RecR [Streptococcus thermophilus LMG 18311]
gi|55822584|ref|YP_141025.1| recombination protein RecR [Streptococcus thermophilus CNRZ1066]
gi|3024524|sp|P96053|RECR_STRTR RecName: Full=Recombination protein recR
gi|73621520|sp|Q5M0P4|RECR_STRT1 RecName: Full=Recombination protein recR
gi|73621521|sp|Q5M580|RECR_STRT2 RecName: Full=Recombination protein recR
gi|1685113|gb|AAC44615.1| RecM [Streptococcus thermophilus]
gi|55736678|gb|AAV60320.1| recombination protein [Streptococcus thermophilus LMG 18311]
gi|55738569|gb|AAV62210.1| recombination protein [Streptococcus thermophilus CNRZ1066]
Length = 198
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 7 IAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|167038709|ref|YP_001661694.1| recombination protein RecR [Thermoanaerobacter sp. X514]
gi|256751421|ref|ZP_05492299.1| recombination protein RecR [Thermoanaerobacter ethanolicus CCSD1]
gi|300913732|ref|ZP_07131049.1| recombination protein RecR [Thermoanaerobacter sp. X561]
gi|307723252|ref|YP_003903003.1| recombination protein RecR [Thermoanaerobacter sp. X513]
gi|229470345|sp|B0K101|RECR_THEPX RecName: Full=Recombination protein recR
gi|166852949|gb|ABY91358.1| recombination protein RecR [Thermoanaerobacter sp. X514]
gi|256749640|gb|EEU62666.1| recombination protein RecR [Thermoanaerobacter ethanolicus CCSD1]
gi|300890417|gb|EFK85562.1| recombination protein RecR [Thermoanaerobacter sp. X561]
gi|307580313|gb|ADN53712.1| recombination protein RecR [Thermoanaerobacter sp. X513]
Length = 199
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L+++PG GP++A+R ++ + + L++A+ + K+ C IC N+ T
Sbjct: 8 IAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRICYNITDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GPEDI I+
Sbjct: 68 EVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPEDIKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L+Y D
Sbjct: 128 LLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGDLEYTDVV 187
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 188 TLSRALEGR 196
>gi|116627502|ref|YP_820121.1| recombination protein RecR [Streptococcus thermophilus LMD-9]
gi|122267900|sp|Q03LJ7|RECR_STRTD RecName: Full=Recombination protein recR
gi|116100779|gb|ABJ65925.1| DNA replication and repair protein RecR [Streptococcus thermophilus
LMD-9]
Length = 198
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 7 IAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LIARLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|239815315|ref|YP_002944225.1| recombination protein RecR [Variovorax paradoxus S110]
gi|239801892|gb|ACS18959.1| recombination protein RecR [Variovorax paradoxus S110]
Length = 196
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 110/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L+ L R+PG G +SA R HL++ + LA A+ V C C
Sbjct: 7 LDALVDALRRLPGVGVKSASRMAFHLLQHDREGAQLLARALQQAAGNVRHCERCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C++C+D +RDAS + VVE AD ALER+ A Y VL G LSPLD IGP+DIG+Q
Sbjct: 67 PVCSVCLDARRDASKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPKDIGLQK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R + E+I A + T EG+ TAH I + L+ + +TRLA G+P GSEL+Y+D G
Sbjct: 127 LFDRALDGTVSEVILATNFTAEGEATAHVIGEALRQRGLNVTRLARGVPAGSELEYVDLG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIAHALVDR 195
>gi|313835779|gb|EFS73493.1| recombination protein RecR [Propionibacterium acnes HL037PA2]
gi|314928454|gb|EFS92285.1| recombination protein RecR [Propionibacterium acnes HL044PA1]
gi|314970148|gb|EFT14246.1| recombination protein RecR [Propionibacterium acnes HL037PA3]
gi|328906729|gb|EGG26501.1| putative recombination protein RecR [Propionibacterium sp. P08]
Length = 201
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP+ A+R H++ + + LA+A+ + K C +C NV +
Sbjct: 6 LQELIDALSRLPGIGPKGAQRIAFHILDAPTEEINELADALREVKEKAKFCKVCFNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG +SPLD GP D+ I+
Sbjct: 66 EVCQYCRDPRRDRSMICVVEESKDVIAVERTRQFRGLYHVLGGVISPLDGKGPADLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 126 LCQRLADETVTEVILATNPNLEGEATATYLSRLIGPMGVTVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|118578741|ref|YP_899991.1| recombination protein RecR [Pelobacter propionicus DSM 2379]
gi|166221951|sp|A1AKR3|RECR_PELPD RecName: Full=Recombination protein recR
gi|118501451|gb|ABK97933.1| DNA replication and repair protein RecR [Pelobacter propionicus DSM
2379]
Length = 197
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ L ++PG G R+A R HL+K + L L+E++ + ++V CSIC +
Sbjct: 8 LSRLVGELKKLPGVGERTALRLAFHLLKTPQNLTA-LSESLLEVKSRVRSCSICFAITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC RD I VVE+ DL ALERS A + YHVL G +SPL IGP ++ I
Sbjct: 67 DPCAICAGD-RDTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSELRIAE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ RI + E++ A + T+EG+ TA Y+ LK + ++I+RLA+GIP+GS+++Y+D
Sbjct: 126 LLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIEYVDAA 185
Query: 190 TIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 186 TVQWALQGRNQL 197
>gi|319944207|ref|ZP_08018483.1| recombination protein R [Lautropia mirabilis ATCC 51599]
gi|319742502|gb|EFV94913.1| recombination protein R [Lautropia mirabilis ATCC 51599]
Length = 198
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GPRSARR HL+++ L+E +A +V CS C +
Sbjct: 7 LDELILALRGLPGVGPRSARRLAFHLLQRDRDAARRLSEGLAQALERVRHCSRCNTLTEH 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D+ R+ +++ VVE+ AD +E ++A LY+VL G LSPLD IGP D+ +
Sbjct: 67 ELCDICSDETRNPALLCVVENPADQLVIEHTRAYQGLYYVLMGRLSPLDGIGPSDLQFER 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R +RE++ A + T EG+ TAHY+ + L + ++R A G+P+G EL+Y+D
Sbjct: 127 LLARATDGVVREVVLATNFTQEGEATAHYLSEVLTARGLSVSRPARGVPLGGELEYVDAA 186
Query: 190 TIFEAIRSR 198
T+ +A+R R
Sbjct: 187 TVAQALRDR 195
>gi|158321872|ref|YP_001514379.1| recombination protein RecR [Alkaliphilus oremlandii OhILAs]
gi|166918735|sp|A8MKQ1|RECR_ALKOO RecName: Full=Recombination protein recR
gi|158142071|gb|ABW20383.1| recombination protein RecR [Alkaliphilus oremlandii OhILAs]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A+R H++ Q LA+A+ + C +C N+
Sbjct: 8 ISQLIEEFTKLPGIGRKTAQRLAFHVINMPIQDAHNLADAIVKAKENIKYCKVCTNLTDQ 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D++RD +I VVED D+ A+ER+K YHVL G++SPL+ IGPEDI I+
Sbjct: 68 EVCNICSDERRDPLLICVVEDPRDVVAMERTKEFKGYYHVLHGAISPLEGIGPEDIKIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + IEG+ TA Y+ LK + +K++R+A+GIP+G +L+Y D+
Sbjct: 128 LLVRLSAQSADEVIIATNPNIEGEATAMYLSKLLKPMGIKVSRIAHGIPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLTKALEGR 196
>gi|327329178|gb|EGE70938.1| recombination protein RecR [Propionibacterium acnes HL103PA1]
Length = 201
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC NV +
Sbjct: 6 LQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICFNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D+ I+
Sbjct: 66 EVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPADLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + + E+I A + +EG+ TA Y+ + + ++RLA G+P+G +L+Y D+
Sbjct: 126 LCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGATVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|332299030|ref|YP_004440952.1| Recombination protein recR [Treponema brennaborense DSM 12168]
gi|332182133|gb|AEE17821.1| Recombination protein recR [Treponema brennaborense DSM 12168]
Length = 195
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 115/192 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L + +R+PG G +SA R + +L+K + A+ +A + +K+ CS+CG+
Sbjct: 4 LEELTESFSRLPGIGKKSASRISNYLLKADRGFMLRFAQQIAVLQDKIKPCSVCGSYTEE 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D R+ +++ VVE D+ +E S+ L+HVLGG ++PLD +GPE + I
Sbjct: 64 DPCAICSDPLRERNLLCVVEQPQDVQTIEASREFRGLFHVLGGVIAPLDGVGPEQLSIGK 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ + E+I A + T+EG TTA Y+ L V +TRLA G+P+G +L+Y D
Sbjct: 124 LMERLGDGSVTEVIIATNPTVEGDTTALYLQKLLAKTGVTVTRLASGLPVGGDLEYADRL 183
Query: 190 TIFEAIRSRTVL 201
T+ + R R
Sbjct: 184 TLARSFRGRAAF 195
>gi|312278019|gb|ADQ62676.1| Recombination protein recR [Streptococcus thermophilus ND03]
Length = 198
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++ PG G ++A R + + ++ + A+ + ++ CS+CG +
Sbjct: 7 IAKLIDSFSKFPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|291303586|ref|YP_003514864.1| recombination protein RecR [Stackebrandtia nassauensis DSM 44728]
gi|290572806|gb|ADD45771.1| recombination protein RecR [Stackebrandtia nassauensis DSM 44728]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 115/187 (61%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+L+ L R+PG GP+SA+R H++ + + LAEA+ + +V C ICGNV T +
Sbjct: 8 DLVDELGRLPGIGPKSAQRIAFHILGTDKADVDRLAEALRVVKERVRFCEICGNVATEEK 67
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D +R +I VVE+ D+ A+ER+ YHVLGG+++PLD +GPED+ I+ L+
Sbjct: 68 CRICRDARRTDEMICVVEEPKDVIAIERTGEFRGRYHVLGGAINPLDGVGPEDLRIRELM 127
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R++ +EL+ A EG+ TA Y+ + + + ++RLA G+P+G +L+Y D+ T+
Sbjct: 128 TRLQAGVTKELVIATDPNTEGEATATYLALMITPMGLTVSRLASGLPVGGDLEYADEVTL 187
Query: 192 FEAIRSR 198
A R
Sbjct: 188 GRAFEGR 194
>gi|257062980|ref|YP_003142652.1| DNA replication and repair protein RecR [Slackia heliotrinireducens
DSM 20476]
gi|256790633|gb|ACV21303.1| DNA replication and repair protein RecR [Slackia heliotrinireducens
DSM 20476]
Length = 198
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L R+PG GP+SA+R L+ + LA+A+ + + V CS C N
Sbjct: 7 IQRLLDELERMPGVGPKSAQRIAYWLLNADRETAMRLADAIIEVKDTVHFCSRCFNYAEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + RD + VV + D+ A+ER+ A LYHVLGG+LSP++ IGP+D+ I
Sbjct: 67 DTCEICASKSRDERTLCVVSEPRDISAIERTSAYRGLYHVLGGALSPMEGIGPDDLKITE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + I E++ A + +EG+TTA Y+ +K + ++++RLA G+P+G +L++ D+
Sbjct: 127 LMARLATEDIAEVVLATNPNVEGETTATYLARIIKPLGIQVSRLASGLPVGGDLEFADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +R L
Sbjct: 187 TLGRAIEARRTL 198
>gi|291165758|gb|EFE27806.1| recombination protein RecR [Filifactor alocis ATCC 35896]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 124/196 (63%), Gaps = 2/196 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVK-KKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+ LI+ L ++PG G ++A+R +++ K++++G LA AM N + C +C N
Sbjct: 5 SNHIDQLIERLGKLPGIGYKTAQRLAFYIINMPKDEVIG-LANAMQNAKEHITYCEVCYN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +PC+IC + RD++ I VVED D+ A+ER++ + YHVL G++SP I P+ I
Sbjct: 64 ISDANPCSICDSKTRDSATICVVEDPRDVAAMERTREYHGKYHVLHGTISPSQAITPDMI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ +I+E+I A + TI+G+ TA Y+ +K +K+TR+A+G+P+G+ L++
Sbjct: 124 RIKELMSRLHDPEIKEIIIATNTTIDGEATAMYLARLIKPFGIKVTRIAHGLPVGANLEF 183
Query: 186 LDDGTIFEAIRSRTVL 201
DD TI A+ R L
Sbjct: 184 ADDVTIGRALEGRREL 199
>gi|311743400|ref|ZP_07717207.1| recombination protein R [Aeromicrobium marinum DSM 15272]
gi|311313468|gb|EFQ83378.1| recombination protein R [Aeromicrobium marinum DSM 15272]
Length = 204
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 119/191 (62%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R HL+ + + A + + V C+ CGNV T
Sbjct: 6 IQDLIDELGRLPGIGPKSAQRIAFHLLDADPEDVRRFASVLTEVKATVHFCATCGNV-TV 64
Query: 70 DP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DP C IC D +RDA+V+ VVE+ D+ A+ER++ YHVLGG++SP+ IGP+ + I+
Sbjct: 65 DPECRICADPRRDATVLCVVEESKDVVAIERTREFRGRYHVLGGAISPIAGIGPDQLRIK 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + E+I A +EG+ TA Y++ L + V +++LA G+P+G +L+Y D+
Sbjct: 125 ELLGRLQDGVVTEVIIATDPNLEGEATATYLIRMLSTLGVAVSKLASGLPVGGDLEYADE 184
Query: 189 GTIFEAIRSRT 199
T+ A RT
Sbjct: 185 LTLGRAFEGRT 195
>gi|315224197|ref|ZP_07866037.1| recombination protein R [Capnocytophaga ochracea F0287]
gi|314945930|gb|EFS97939.1| recombination protein R [Capnocytophaga ochracea F0287]
Length = 206
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 116/194 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + +A++P G R+A R LHL+K+ E+ LA+A+ + + C C
Sbjct: 3 FSSKLLENAVYEIAQLPSIGKRTALRLALHLLKQPEEQSLQLAQAIVALRTHIQYCKNCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC + RD V+ VVED D+ A+E + YHVLGG +SP+D I P +
Sbjct: 63 NISDVDLCEICANPMRDTGVVCVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAPSN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SLIE+++ K+ ELI A+S T+EG TT YI +++ + I+ +A GI +G EL+
Sbjct: 123 LYIASLIEKVKTGKVTELILALSNTMEGDTTNFYIYKQVEPYHITISTIARGIAVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I R
Sbjct: 183 YTDEVTLGRSITQR 196
>gi|37523068|ref|NP_926445.1| recombination protein [Gloeobacter violaceus PCC 7421]
gi|73621488|sp|Q7NFM5|RECR_GLOVI RecName: Full=Recombination protein recR
gi|35214071|dbj|BAC91440.1| recombination protein [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 118/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ L R+PG GP++A+R HL+++ + LA+A+ ++ +CS C N+
Sbjct: 4 RPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCFNLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC R I VV + DL A+ER++ YHVLGG ++P++ IGPE + I
Sbjct: 64 AEDPCDICRQPGRQGETICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQLRI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L++R+ ++E+I AI+ + EG+ T Y+ +K + ++TR+A+G+P+G +L+Y D
Sbjct: 124 KELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVKVLGPRVTRIAFGLPVGGDLEYAD 183
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 184 EMTLARALEGR 194
>gi|148266339|ref|YP_001233045.1| recombination protein RecR [Geobacter uraniireducens Rf4]
gi|189029364|sp|A5G9K4|RECR_GEOUR RecName: Full=Recombination protein recR
gi|146399839|gb|ABQ28472.1| DNA replication and repair protein RecR [Geobacter uraniireducens
Rf4]
Length = 197
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + L+ L ++P G ++A R HL+K E L LA+++ + + V CS C +
Sbjct: 6 RSLTKLLGELKKLPSVGDKTALRLAFHLLKSPENL-SALAKSLLEVRDGVRFCSTCFGIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+DPC +C + DAS I VVE+ D+ A+ERS+A YHVL G+LSPL+ + P + I
Sbjct: 65 ESDPCHLCTTPRDDAS-ICVVEEPQDILAMERSQAFKGRYHVLHGALSPLNGVTPGQLRI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R+E ++E++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y+D
Sbjct: 124 AELLQRLENGSVKEVLLATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPIGSDLEYVD 183
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 184 AATVQRAVEGRSEL 197
>gi|257069943|ref|YP_003156198.1| DNA replication and repair protein RecR [Brachybacterium faecium
DSM 4810]
gi|256560761|gb|ACU86608.1| DNA replication and repair protein RecR [Brachybacterium faecium
DSM 4810]
Length = 197
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + + LAE + + + V C ICGNV
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLDADDAAVRRLAEVLIQVKDTVRFCEICGNVSAE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R VI VVE+ D+ A+E+ + YHVLGG++ P+ +GP D+ I
Sbjct: 66 EKCRICTDPRRTDEVICVVEESKDIVAIEKIREFKGRYHVLGGAIDPIGGVGPNDLRITQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A+ IEG+ TA Y+ L +++ +TRLA G+P+G +LDY D+
Sbjct: 126 LMSRLGSGETTEVILALDPNIEGEATAAYLSRLLGPMELTVTRLASGLPVGGDLDYADEM 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFLGR 194
>gi|294053805|ref|YP_003547463.1| recombination protein RecR [Coraliomargarita akajimensis DSM 45221]
gi|293613138|gb|ADE53293.1| recombination protein RecR [Coraliomargarita akajimensis DSM 45221]
Length = 198
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ ++PG G RSA R + L+ +K + L L ++ V C CGN+
Sbjct: 5 FEELLQQFKKLPGLGYRSAERIAMQLLVEKPESLERLLSSLQRAQQVVGRCEQCGNLAEE 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C D++RD V+ VVE V DL A+ERS A YHVL G LSP+ +GPED+ +
Sbjct: 65 GTCAVCTDERRDPQVLCVVEHVTDLMAIERSAAWKGQYHVLHGKLSPIHGVGPEDLNFSA 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPMGSELDYLDD 188
L +R+ IRE++ A+S IEGQ T HYI +++ G ++++R+ +G+P G + Y D
Sbjct: 125 LEKRLSAGSIREIVLALSNDIEGQATCHYIQEEIVGERAIQVSRIGFGLPSGGGVTYADS 184
Query: 189 GTIFEAIRSRTV 200
T+ A+ +R V
Sbjct: 185 VTLKSALEARRV 196
>gi|108803359|ref|YP_643296.1| DNA replication and repair protein RecR [Rubrobacter xylanophilus
DSM 9941]
gi|122382097|sp|Q1AYP4|RECR_RUBXD RecName: Full=Recombination protein recR
gi|108764602|gb|ABG03484.1| DNA replication and repair protein RecR [Rubrobacter xylanophilus
DSM 9941]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 120/194 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +E LI L+R+P GPRSA+R H+++ +++ LAEA+ + ++ C C N+
Sbjct: 6 RSVERLIAELSRLPTIGPRSAQRIAFHIIRTRKEEALALAEALREVKERIRPCRRCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D +RD SVI VVED D+ +ER+ LYHVLGG+LSPLD + PED+ I
Sbjct: 66 EGEECDICRDPRRDRSVICVVEDPYDIGPIERTGEYRGLYHVLGGALSPLDGVEPEDLRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ER+ + RELI A + G+ TA +I +++ + V++T LA G+P+G +L+Y D
Sbjct: 126 AELVERVRSEGTRELILATNPNTTGEATAMFIAQEVRELPVRVTALASGLPVGGDLEYAD 185
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A R L
Sbjct: 186 EVTLGRAFAGRREL 199
>gi|114320664|ref|YP_742347.1| recombination protein RecR [Alkalilimnicola ehrlichii MLHE-1]
gi|122311667|sp|Q0A8I0|RECR_ALHEH RecName: Full=Recombination protein recR
gi|114227058|gb|ABI56857.1| recombination protein RecR [Alkalilimnicola ehrlichii MLHE-1]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI+ L +PG GPRSA+R HL+++ LA A+ ++V C C V T
Sbjct: 7 IDQLIESLRCLPGVGPRSAQRMAFHLLQRDRDGGRRLATAIREAMDQVGHCRQC-RVLTE 65
Query: 70 DP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+P C +C +RD S++ VVE AD++ALE++ LY VL G LSPLD +GPE +G+
Sbjct: 66 EPVCGLCASDRRDRSLLCVVEGPADVFALEQATDFRGLYFVLMGRLSPLDGVGPEALGLD 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ +++E+I A S T+EG+ T+HYI + V+ TR+A+G+PMG EL+Y+D
Sbjct: 126 RLEARLAEGEVQEVILATSPTVEGEATSHYIAELAHQRGVRTTRIAHGVPMGGELEYVDS 185
Query: 189 GTIFEAIRSR 198
GT+ A R
Sbjct: 186 GTLSHAFAGR 195
>gi|297625599|ref|YP_003687362.1| Recombination protein recR [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921364|emb|CBL55917.1| Recombination protein recR [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 208
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R L+ + + + LA + + LCSIC NV +
Sbjct: 6 IQDLIDELGRLPGVGPKSAQRIAFWLLDQPQADVEQLANTLRTVKEGTHLCSICFNVTDS 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD S I VVE+ D+ A+ER++ LYHVLGGS+SP+D GP D+ I
Sbjct: 66 DICRICRDPRRDHSSICVVEESKDVMAIERTREFRGLYHVLGGSISPIDGRGPGDLRIAE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ K+ E+I A +EG TA YI L + ++++RLA G+P+G +L+Y D+
Sbjct: 126 LVRRLQDPKVSEIILATDPNLEGDATATYISRLLGETPGIRVSRLASGLPVGGDLEYADE 185
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 186 VTLGRAFSGR 195
>gi|78184972|ref|YP_377407.1| recombination protein RecR [Synechococcus sp. CC9902]
gi|123581335|sp|Q3AX77|RECR_SYNS9 RecName: Full=Recombination protein recR
gi|78169266|gb|ABB26363.1| DNA replication and repair protein RecR [Synechococcus sp. CC9902]
Length = 192
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + E + A+A+ ++V C C ++
Sbjct: 1 MARLIDQFQRLPGIGPRTAQRLALHLLNQPEDQVQQFADALLAARSQVGQCQSCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC +R+ +I VV D DL ALER++ YHVLGG +SP+D IGPE + I+
Sbjct: 61 PLCEICSKPERNNGLICVVADSRDLLALERTREFKGQYHVLGGLISPMDGIGPELLHIKP 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI I E+I A++ ++EG TT+ Y+ +K ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LIERIAKDGISEVILALTPSVEGDTTSLYLARLMKPF-CPVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 180 TLSRALEGR 188
>gi|256822250|ref|YP_003146213.1| recombination protein RecR [Kangiella koreensis DSM 16069]
gi|256795789|gb|ACV26445.1| recombination protein RecR [Kangiella koreensis DSM 16069]
Length = 199
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI+ +PG G +SA+R L+++ + LAEA+ N V CS C +
Sbjct: 6 IKKLIEAFTCLPGVGNKSAQRMAYFLLERNREGGEQLAEALVAAMNGVKHCSRCRDFTED 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC Q RD S++ +VE AD++A+E + + Y VL G LSPLD IGPED+G+
Sbjct: 66 DLCGICNSQARDNSLLCIVESPADVFAIESTASFKGKYFVLMGHLSPLDGIGPEDLGLDQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ++ +K E+I A ++T+EG+ TAH+I + LK +V ++R+A G+P+G EL+Y+D G
Sbjct: 126 LKRLVDEEKPVEIILATNSTVEGEATAHFISEMLKKNEVVLSRIASGVPLGGELEYIDGG 185
Query: 190 TIFEAIRSR 198
T+ ++ R
Sbjct: 186 TLMHSLSGR 194
>gi|227529517|ref|ZP_03959566.1| recombination protein RecR [Lactobacillus vaginalis ATCC 49540]
gi|227350602|gb|EEJ40893.1| recombination protein RecR [Lactobacillus vaginalis ATCC 49540]
Length = 199
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++PG G ++A R + + + + A+++ + + CSICGN+
Sbjct: 7 LAKLIESYTKLPGIGQKTATRLAFYTLTMQGDDVTNFAKSLLSAKRDLHSCSICGNITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S I+VVE D+ A+ER + LYHVL G +SP+ GPEDI I S
Sbjct: 67 DPCPICQDKTRDRSQILVVEQSQDVMAMERMHEYHGLYHVLNGVISPVAGTGPEDINITS 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ +I+E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++DY D+
Sbjct: 127 LLDRLKKDDEIKEVIIATNASSDGELTASYLAKLIKPAGIKVTRLAHGLSVGADIDYADE 186
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 187 VTLFKAVQGRT 197
>gi|255284260|ref|ZP_05348815.1| recombination protein RecR [Bryantella formatexigens DSM 14469]
gi|255265213|gb|EET58418.1| recombination protein RecR [Bryantella formatexigens DSM 14469]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++I LI+ +++PG G +SA+R H++ + E+ + LA+A+ + V C C +
Sbjct: 6 RQISRLIEEFSKLPGIGAKSAQRMAFHIINRPEEEVKALAQAILDAKENVRYCKQCFTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
++ C IC + +RDA I+VVE+ DL A E++ +YHVL G++SP+ IGP DI +
Sbjct: 66 DSELCPICSNPKRDAKTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPNDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L++R++ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D
Sbjct: 126 KELMQRLQ-GDVNEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 185 QVTLLRALEGRTEL 198
>gi|238926313|ref|ZP_04658073.1| recombination protein RecR [Selenomonas flueggei ATCC 43531]
gi|238885717|gb|EEQ49355.1| recombination protein RecR [Selenomonas flueggei ATCC 43531]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 118/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG G ++A R H++ + LA A+ K+ CS+C N+ +
Sbjct: 7 LTQLIEQLRALPGIGAKTATRLAYHILDMDMERARRLAAAITGAKEKIGFCSVCFNLTDS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C ++RD + I VVE D+ A+ER + +YHVL G+LSPL+ +GP DI I+
Sbjct: 67 DPCAVCTAEKRDHTTICVVEQPQDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDIRIRE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R + I+E+I A + +EG+ TA YI LK + +++TR+A+G+P+G +L+Y D+
Sbjct: 127 LVLRAGKEDIQEVIIATNPNVEGEATAMYIAKLLKPMGIRVTRIAHGLPVGGDLEYADEV 186
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 187 TLSRAMENR 195
>gi|313124286|ref|YP_004034545.1| recombination protein recr [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280849|gb|ADQ61568.1| Recombination protein recR [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685700|gb|EGD27779.1| recombination protein R [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 199
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN+
Sbjct: 7 IARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGNITEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I I+S
Sbjct: 67 DPCAICSNPARDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIEYANL 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTEL 199
>gi|313114016|ref|ZP_07799570.1| recombination protein RecR [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623636|gb|EFQ07037.1| recombination protein RecR [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 199
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 115/193 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E LI+ ++ PG G + A R ++ ++ LA A+ + K+ C IC N
Sbjct: 4 TAAPLEKLIEEFSKFPGIGRKGATRMAYQVLSMSDEDAAALAGAIQGAHTKLHRCRICQN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC +RD SVI VVE D+ A ER++ + LYHVL G LSP+D I E +
Sbjct: 64 YTEADICPICASAKRDPSVICVVETPRDVQAFERTREYHGLYHVLHGLLSPMDGITAEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R+ K++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G+ L+Y
Sbjct: 124 CVKELLARLGDGKVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGASLEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T++ A+ R
Sbjct: 184 TDETTLYRALSGR 196
>gi|300811156|ref|ZP_07091668.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497860|gb|EFK32870.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 199
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN+
Sbjct: 7 IARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGNITEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I I+S
Sbjct: 67 DPCAICSNPTRDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIEYANL 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTEL 199
>gi|238855361|ref|ZP_04645673.1| recombination protein RecR [Lactobacillus jensenii 269-3]
gi|260664923|ref|ZP_05865774.1| recombination protein RecR [Lactobacillus jensenii SJ-7A-US]
gi|282934591|ref|ZP_06339838.1| recombination protein RecR [Lactobacillus jensenii 208-1]
gi|313472531|ref|ZP_07813021.1| recombination protein RecR [Lactobacillus jensenii 1153]
gi|238832022|gb|EEQ24347.1| recombination protein RecR [Lactobacillus jensenii 269-3]
gi|239529965|gb|EEQ68966.1| recombination protein RecR [Lactobacillus jensenii 1153]
gi|260561406|gb|EEX27379.1| recombination protein RecR [Lactobacillus jensenii SJ-7A-US]
gi|281301343|gb|EFA93640.1| recombination protein RecR [Lactobacillus jensenii 208-1]
Length = 199
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + E + ++A+ ++ + CSICGN+ T
Sbjct: 7 IARLIESYMKLPGIGEKTATRLAFYTLDMPEDDVEQFSQALKDVKTLLHQCSICGNITET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S ++VVE D+ A E + +YHVL G LSP++ IGPEDI I+S
Sbjct: 67 DPCQICRDSNRDHSTVMVVEQPKDVMAFEEMGEYDGMYHVLHGVLSPMEGIGPEDINIKS 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ I+E+I A+++T EG++TA YI LK +K+TRLA G+ +G++++Y +
Sbjct: 127 LITRLQKDDDIKEIIIALNSTPEGESTAMYIAKLLKPAGLKVTRLASGLAVGTDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 ITLKRAVQGRINL 199
>gi|257125660|ref|YP_003163774.1| recombination protein RecR [Leptotrichia buccalis C-1013-b]
gi|257049599|gb|ACV38783.1| recombination protein RecR [Leptotrichia buccalis C-1013-b]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K++++LI + A++PG G +SA R +++K E + + E + + + + C ICGN+
Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLEKSEADIDRMLEIIKDSHTNIKHCEICGNLS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC +++RD VI VVE V D+ A E+S+ N LYHVLGG + PL+ + ED+ +
Sbjct: 62 ENDICEICANEKRDKEVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNL 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R++ ++E+I A++ +EG+TT+ Y+ LK +VKI+++A GIPMG ++Y D
Sbjct: 122 MKLMRRLD-GNVKEIILALNPDLEGETTSLYLTKFLKDKNVKISKIASGIPMGGNIEYTD 180
Query: 188 DGTIFEAIRSR 198
T+ ++ R
Sbjct: 181 MATLGRSLEGR 191
>gi|118473908|ref|YP_890498.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 155]
gi|171472986|sp|A0R5R0|RECR_MYCS2 RecName: Full=Recombination protein recR
gi|118175195|gb|ABK76091.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 155]
Length = 203
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L + I + V CS+CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLGRIRDGVTFCSVCGNVSDE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDAS++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE + I+
Sbjct: 66 ERCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER+E + E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLNRIGERVEGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|90020984|ref|YP_526811.1| recombinational DNA repair protein [Saccharophagus degradans 2-40]
gi|122996350|sp|Q21L30|RECR_SACD2 RecName: Full=Recombination protein recR
gi|89950584|gb|ABD80599.1| recombination protein RecR [Saccharophagus degradans 2-40]
Length = 197
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI L +PG GP+SA+R LHL+++ + L+E +A V C C +
Sbjct: 6 IDQLINSLRHLPGVGPKSAQRMALHLLERDREGAQNLSEVLAKAVEHVHRCQQCRTLTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + +R+ + +VE AD+ A+E S + Y VL G LSP+D IGP++IG+
Sbjct: 66 ALCNICSNARRNRKELCIVETPADVIAIETSAVFSGYYFVLLGRLSPIDGIGPKEIGMDV 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R +I E+I A + TIEG+ TAHYI ++ K +K++R+A+GIP+G EL+Y+D G
Sbjct: 126 LASRFAEGEIEEVIIATNPTIEGEATAHYISERAKAQGIKVSRIAHGIPIGGELEYVDGG 185
Query: 190 TIFEAIRSR 198
T+ AI R
Sbjct: 186 TLAHAISRR 194
>gi|255021194|ref|ZP_05293244.1| Recombination protein RecR [Acidithiobacillus caldus ATCC 51756]
gi|254969309|gb|EET26821.1| Recombination protein RecR [Acidithiobacillus caldus ATCC 51756]
Length = 199
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L ++L R+PG GPRS++R L+ +K +L+ LA A+ + + CS C N+ + C
Sbjct: 10 LTRLLRRLPGVGPRSSQRIAYDLLMRKRELMPALAMALQAAHEHIRSCSRCNNLCEAELC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
AIC D QR ++ VVE DL A+E S A Y VL G LSPLD IGPED+ I
Sbjct: 70 AICSDTQRQRELLCVVESPVDLAAIEESGAYGGDYFVLMGHLSPLDGIGPEDLHIDRFTA 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ +RE+IFA ++T+EG+ TA ++ + V+ +R+A GIPMG EL+Y+D GT+
Sbjct: 130 RLAEPGLREVIFATNSTLEGEATAQFLAGYVPA-GVRSSRIARGIPMGGELEYVDRGTLG 188
Query: 193 EAIRSR 198
A+ R
Sbjct: 189 RALLGR 194
>gi|327405347|ref|YP_004346185.1| DNA replication and repair protein RecR [Fluviicola taffensis DSM
16823]
gi|327320855|gb|AEA45347.1| DNA replication and repair protein RecR [Fluviicola taffensis DSM
16823]
Length = 201
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 119/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I K +E ++ + +PG G R+A R L+L+K+ + L + + + V CS C
Sbjct: 2 NIPSKYVEEAVEQFSSLPGIGKRTALRLVLNLLKRNPEELERFGDVLQQLKTHVQSCSSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN+ T C+IC +++R+ +I VVED+ D+ A+E + +YHVLGG +SP+D IGP
Sbjct: 62 GNISDTAICSICANEKRNHRLICVVEDIRDVMAIESTGTYLGIYHVLGGIISPMDGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ IQ L+++ + E+I A+S T+EG TT ++ K+ +V+IT L+ GI +GSE+
Sbjct: 122 DLFIQPLVDKCSQGSVDEIILALSPTMEGDTTNFFLYKKIHATNVQITTLSRGIAVGSEI 181
Query: 184 DYLDDGTIFEAIRSR 198
Y D+ T+ +I+ R
Sbjct: 182 QYADEITLSRSIQQR 196
>gi|288940168|ref|YP_003442408.1| recombination protein RecR [Allochromatium vinosum DSM 180]
gi|288895540|gb|ADC61376.1| recombination protein RecR [Allochromatium vinosum DSM 180]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG GP+SARR HL+++ + LA MA + CS C +
Sbjct: 7 LNQLIEALRCLPGVGPKSARRIAFHLLERDREGGARLARVMAEAMVAIRRCSRCRTLTEH 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CA+C + RD S++ +VE +++ A+E++ Y VLGG LSPLD IGP+++G+
Sbjct: 67 EVCALCANPNRDGSLLCIVEQPSEVVAIEQATDYRGRYFVLGGRLSPLDGIGPDELGLDV 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ + I E+I AIS T+EG TA +I D+ V++TR+A+G+P+G EL+Y+D G
Sbjct: 127 LEARLRDESIAEVILAISPTVEGGATAQFIADRAARHGVRVTRIAHGVPLGGELEYVDGG 186
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 TLALAFSGRHAL 198
>gi|158520557|ref|YP_001528427.1| recombination protein RecR [Desulfococcus oleovorans Hxd3]
gi|226738998|sp|A8ZU38|RECR_DESOH RecName: Full=Recombination protein recR
gi|158509383|gb|ABW66350.1| recombination protein RecR [Desulfococcus oleovorans Hxd3]
Length = 199
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I N I L+R+PG G ++A R +HL+ ++ + LA ++ ++ +CS+C + T
Sbjct: 8 IRNAISHLSRLPGIGQKTAERLAMHLLHVPDRAVHELARSLVDLKKNTRMCSVCFTLSDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC D R+AS++ VVE ++ A+E++ A +YHVL G LSP+D IGP+DI I+
Sbjct: 68 PVCAICGDPDRNASLLCVVEGPTEVMAIEKTAAFKGVYHVLHGVLSPMDGIGPDDIRIRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++E++ A +EG+ TA Y+++ LK V +TR+A G+P G E+ Y D
Sbjct: 128 LVDRVKKGIVKEIVLATDTRVEGEATAAYLVEVLKPFPVTVTRIASGMPAGGEVRYSDPV 187
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 188 TLKNAMEKRYAL 199
>gi|291515277|emb|CBK64487.1| DNA replication and repair protein RecR [Alistipes shahii WAL 8301]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +++++ L+++PG G R+A R +H+++ + + + E++ N++ CS C N+
Sbjct: 3 KLLQDVVGELSKLPGVGRRTALRLAIHILRMERDSVAEMTESIDRFRNEIRYCSQCNNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++RD + I VVE VAD+ ++E ++ +YHVLGG +SP+ I P D+ I
Sbjct: 63 DEEVCPICADRERDHATICVVEQVADVLSVENTRQYRGMYHVLGGVISPMQGISPSDLKI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYL 186
L ERI ++E+I AIS ++EG+TT Y+M++L+ +K+T +A GI G EL+Y+
Sbjct: 123 DLLCERIARGGVKEVILAISTSVEGETTLFYLMNRLRQFPGLKVTSIARGIGFGDELEYV 182
Query: 187 DDGTIFEAIRSR 198
D+ TI A+ +R
Sbjct: 183 DELTITHALMNR 194
>gi|258650921|ref|YP_003200077.1| recombination protein RecR [Nakamurella multipartita DSM 44233]
gi|258554146|gb|ACV77088.1| recombination protein RecR [Nakamurella multipartita DSM 44233]
Length = 202
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + L A+ + ++V C++CGNV
Sbjct: 8 VQDLIDELGRLPGIGPKSAQRIAFHLLTADPVDITRLQSALQRVKDEVRFCTVCGNVAAD 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R+ +VI VVE+ D+ A+ER++ YHVLGG++SP+D IGP+ + I
Sbjct: 68 EKCRICADPAREDAVICVVEEPKDVAAVERTREFRGKYHVLGGAISPIDGIGPDQLRIAP 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGSELDYLDD 188
L+ RI +RE+I A +EG+ TA Y+ L+ + +TRLA G+P+G +L+Y D+
Sbjct: 128 LLTRIAAPGVREVILATDPNLEGEATATYLTRLLQPFPGLTVTRLASGLPVGGDLEYADE 187
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 188 VTLGRAFAGR 197
>gi|255532916|ref|YP_003093288.1| recombination protein RecR [Pedobacter heparinus DSM 2366]
gi|255345900|gb|ACU05226.1| recombination protein RecR [Pedobacter heparinus DSM 2366]
Length = 205
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 117/195 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E+ + +++PG G ++A R LHL+ K+++ + + + ++ CS+C
Sbjct: 2 NFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVDHFGNVLIRLRKEIKHCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +R+ +I VVED D+ A+E + +YHVLGG +SP+D IGP
Sbjct: 62 HNISDQHTCNICTAGKREKELICVVEDTRDVMAVENTGQYFGVYHVLGGLISPMDGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL++R+ ++E+I A+SAT+EG TT Y+ +LK + IT +A GI G EL
Sbjct: 122 DLFIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSIVTR 196
>gi|39995207|ref|NP_951158.1| recombination protein RecR [Geobacter sulfurreducens PCA]
gi|73621487|sp|Q74GZ7|RECR_GEOSL RecName: Full=Recombination protein recR
gi|39981969|gb|AAR33431.1| recombination protein RecR [Geobacter sulfurreducens PCA]
gi|298504212|gb|ADI82935.1| recombination protein RecR [Geobacter sulfurreducens KN400]
Length = 197
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ L ++PG G ++A R HL+K + LA+++ ++ ++V CS+C +
Sbjct: 8 LSRLLAELQKLPGVGEKTALRLAFHLLKSPDNA-AALADSLRDVMSRVRFCSVCFGITED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C D RD I VVE+ DL A+ER++A YHVL G+LSPL+ + P+ + +
Sbjct: 67 DPCRFCSDA-RDDGAICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRLRVAE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+E +RE++ A + T+EG+ TA Y+ +K + V++TRLA+GIP+GS+L+++D
Sbjct: 126 LMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSDLEFVDAA 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 186 TVQRALEGRSEL 197
>gi|126641730|ref|YP_001084714.1| recombination protein gap repair [Acinetobacter baumannii ATCC
17978]
Length = 172
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 107/166 (64%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
LHL+ K + LA A+ + + CS+C ++ + C IC +RD ++ VVE A
Sbjct: 3 LHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEHEICDICASTERDDQLLCVVESPA 62
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
D+ A+E+S + YHVLGG LSPLD IGPE+IGI LI+R+ I E+I A +AT+EG
Sbjct: 63 DVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPYLIQRLSQGTIEEVILATNATVEG 122
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
Q TAHY+++ K + + +TR+A G+P G EL+Y+D T+ +A+ +R
Sbjct: 123 QATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVDSHTLSQAVHNR 168
>gi|33865462|ref|NP_897021.1| recombination protein RecR [Synechococcus sp. WH 8102]
gi|73621524|sp|Q7U7Q3|RECR_SYNPX RecName: Full=Recombination protein recR
gi|33632631|emb|CAE07443.1| RecR protein [Synechococcus sp. WH 8102]
Length = 192
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + E+ + A+A+ +V C C ++
Sbjct: 1 MARLIDQFERLPGIGPRTAQRLALHLLNQPEEQIRQFADALLAARTQVGQCQTCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + +R +I VV D DL ALER++ YHVLGG +SP+D IGPE + +
Sbjct: 61 PECEICRNPERRNGLICVVADSRDLLALERTREFQGRYHVLGGLISPMDGIGPELLHVTP 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ RI + I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LVARINQEDITEVILALTPSVEGDTTSLYLARLLKPF-CPVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 180 TLSRALEGRRPL 191
>gi|331092481|ref|ZP_08341304.1| recombination protein recR [Lachnospiraceae bacterium 2_1_46FAA]
gi|330400984|gb|EGG80584.1| recombination protein recR [Lachnospiraceae bacterium 2_1_46FAA]
Length = 198
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+R+PG G +SA+R H++ ++ + +A AM N V CS C +
Sbjct: 7 QISKLIEELSRLPGIGAKSAQRLAFHIIHMPKEQVEQMANAMVEARNNVRYCSKCYTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D RD I+VVE DL A E++ +YHVL G++SP+ IGP DI ++
Sbjct: 67 REVCPICSDDSRDEKTIMVVETTRDLVAYEKTGKYRGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMERLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTEL 198
>gi|219666122|ref|YP_002456557.1| recombination protein RecR [Desulfitobacterium hafniense DCB-2]
gi|254790765|sp|B8FY16|RECR_DESHD RecName: Full=Recombination protein recR
gi|219536382|gb|ACL18121.1| recombination protein RecR [Desulfitobacterium hafniense DCB-2]
Length = 198
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 124/189 (65%), Gaps = 3/189 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI L+R+PG GP++A R +L+++ Q+ LAEAM ++ CS+C N
Sbjct: 10 LADLITGLSRLPGIGPKTAGRLAFYLLQQP-QVAENLAEAMIRAQREIRQCSLCCNYTDH 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC ++R+ +++ +VE D+ +LE+++ LYHVL G +SPL+ +GPE + I
Sbjct: 69 DPCPICTGEKRERTLLCIVEQPRDVVSLEKTREFKGLYHVLHGVISPLEGVGPEQLTISK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E ++E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G +L+Y D+
Sbjct: 129 LLGRLE--GVQEVVMAMNPTVEGEATALYLSRLLKPLGIKVTRIAHGLPVGGDLEYADEI 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARALEGR 195
>gi|225848980|ref|YP_002729144.1| recombination protein RecR [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644146|gb|ACN99196.1| recombination protein RecR [Sulfurihydrogenibium azorense Az-Fu1]
Length = 199
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 122/189 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ +I+ ++ +PG+G +SA+R ++L+K L + +A + +K+ C CG
Sbjct: 8 LKKVIEDISNLPGYGEKSAQRLAINLLKLPRGEAVDLIKHIAQMLDKIHPCKECGIYTDQ 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC ++RD + I VVE+ D +A+E++ +YHVLGG LSPL+ IGPE + I++
Sbjct: 68 EICPICSSEERDKTHICVVEESFDAYAIEKTGKFKGVYHVLGGRLSPLEGIGPEKLNIKT 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI+ +++E+I A + T+EG+ T +YI + LK + ITRLAYG+P GS L+ DD
Sbjct: 128 LIERIKKYQVKEVIIATNPTVEGEATGNYIYNLLKKYPLNITRLAYGLPFGSVLENADDF 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLSKALEYR 196
>gi|116072458|ref|ZP_01469725.1| RecR protein [Synechococcus sp. BL107]
gi|116064980|gb|EAU70739.1| RecR protein [Synechococcus sp. BL107]
Length = 192
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + E + A+A+ ++V C C ++
Sbjct: 1 MARLIDQFQRLPGIGPRTAQRLALHLLNQPEDQVQQFADALLAARSQVGQCQSCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC +R+ +I VV D DL ALER++ YHVLGG +SP+D IGPE + I+
Sbjct: 61 PLCEICSKPERNNGLICVVADSRDLLALERTREFKGRYHVLGGLISPMDGIGPELLHIKP 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI I E+I A++ ++EG TT+ Y+ +K ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LIERIAKDGITEVILALTPSVEGDTTSLYLARLIKPF-CPVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 180 TLSRALEGR 188
>gi|255014909|ref|ZP_05287035.1| recombination protein RecR [Bacteroides sp. 2_1_7]
Length = 208
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 122/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C
Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
IC N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KICHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G
Sbjct: 121 GPSDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIINRT 199
>gi|325911633|ref|ZP_08174041.1| recombination protein RecR [Lactobacillus iners UPII 143-D]
gi|325476619|gb|EGC79777.1| recombination protein RecR [Lactobacillus iners UPII 143-D]
Length = 199
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN+ T
Sbjct: 7 IAKLIDNFMKLPGIGEKTATRLAFYTLDMQDEDVEDFSQALIEAKKQIHSCSICGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I I++
Sbjct: 67 DPCEICSNANRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEINIKN 126
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++Y +
Sbjct: 127 LIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 ITLKRAVQGRISL 199
>gi|240173344|ref|ZP_04752002.1| recombination protein RecR [Mycobacterium kansasii ATCC 12478]
Length = 203
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + + L + + + V C++CGNV
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLSVEPSDIDRLTAVLGRVRDGVRFCAVCGNVSDG 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE + I+
Sbjct: 66 ERCRICADPRRDGSLVCVVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPEQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ I E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R VL
Sbjct: 186 FADELTLGRALTGRRVL 202
>gi|259501363|ref|ZP_05744265.1| recombination protein R [Lactobacillus iners DSM 13335]
gi|302190916|ref|ZP_07267170.1| recombination protein RecR [Lactobacillus iners AB-1]
gi|309806646|ref|ZP_07700642.1| recombination protein RecR [Lactobacillus iners LactinV 03V1-b]
gi|259167216|gb|EEW51711.1| recombination protein R [Lactobacillus iners DSM 13335]
gi|308166951|gb|EFO69134.1| recombination protein RecR [Lactobacillus iners LactinV 03V1-b]
Length = 199
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN+ T
Sbjct: 7 IAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I I++
Sbjct: 67 DPCEICSNTNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEINIKN 126
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++Y +
Sbjct: 127 LIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 ITLKRAVQGRISL 199
>gi|301058419|ref|ZP_07199440.1| recombination protein RecR [delta proteobacterium NaphS2]
gi|300447475|gb|EFK11219.1| recombination protein RecR [delta proteobacterium NaphS2]
Length = 203
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 113/189 (59%), Gaps = 2/189 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L+ ++PG G +SA R L +++ +L LA ++ ++ K+ CSIC N+ DP
Sbjct: 10 KLVDQFTKLPGIGQKSATRMALFILRSNRELAESLARSLIDVKEKIHFCSICFNLTDEDP 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
CAIC D QR I VVE D ALE S YHVL G LSPLD +GPED+ I+ L+
Sbjct: 70 CAICRDGQRADGTICVVETPGDQMALEESGVYRGRYHVLHGVLSPLDGVGPEDLRIEKLL 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYI--MDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
R+E ++I+E+I A + T G+TTA +I + K + +TR+A G+PMG +L ++D
Sbjct: 130 GRLEREQIKEIILATNPTTGGETTASFISALISEKHPAINVTRIALGVPMGGDLKFMDTM 189
Query: 190 TIFEAIRSR 198
T+ A++ R
Sbjct: 190 TLQHALKRR 198
>gi|291562957|emb|CBL41773.1| recombination protein RecR [butyrate-producing bacterium SS3/4]
Length = 199
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 125/193 (64%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+++PG G ++A+R H++ E+ + L+ ++ + + V C C +
Sbjct: 7 QISKLIEELSKLPGIGNKTAQRLAFHIINMPEEQVERLSSSIRDAKHNVHYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC Q RD SVI+VVE+ DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 QELCPICRSQTRDHSVIMVVENPRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ ++++E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMMRLQTEEVKEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLLRALEGRVEL 199
>gi|315653114|ref|ZP_07906039.1| recombination protein R [Lactobacillus iners ATCC 55195]
gi|315489479|gb|EFU79116.1| recombination protein R [Lactobacillus iners ATCC 55195]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN+ T
Sbjct: 7 IAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I I++
Sbjct: 67 DPCEICSNDNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEINIKN 126
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++Y +
Sbjct: 127 LIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 ITLKRAVQGRISL 199
>gi|189485280|ref|YP_001956221.1| recombination protein RecR [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|226739009|sp|B1GZS8|RECR_UNCTG RecName: Full=Recombination protein recR
gi|170287239|dbj|BAG13760.1| recombination protein RecR [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 198
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 119/191 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +E ++ I+ ++PG G + A R + H++K + + L +++ N + CSIC N+
Sbjct: 5 RPVEKMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSICCNLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC D R+ +++ VVE DL A+ + + LY VLGG+LSPLD +GP+DI I
Sbjct: 65 EHDPCPICSDVTREKNIVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGPDDIRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R++ I E+I A A +G+ TA Y+ D +K + +K+TRL YG+P+G +++Y D
Sbjct: 125 DKLIKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGDIEYAD 184
Query: 188 DGTIFEAIRSR 198
+ TI AI R
Sbjct: 185 EITISRAIAGR 195
>gi|153813527|ref|ZP_01966195.1| hypothetical protein RUMOBE_03949 [Ruminococcus obeum ATCC 29174]
gi|149830398|gb|EDM85490.1| hypothetical protein RUMOBE_03949 [Ruminococcus obeum ATCC 29174]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 122/193 (63%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L+ +PG GP+SA+R H++ + + L ++ K+ C C +
Sbjct: 7 HINKLIEQLSHLPGIGPKSAQRLAFHIMNMPKDQVEQLTSSITGAREKIRYCKKCCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +RDAS I+VVE+ DL A E++ +YHVL G++SP+ IGP+DI ++
Sbjct: 67 QELCPICSNPKRDASTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPDDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + I+E+I A ++++EG+TTA YI +K ++++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMKRLQTEDIKEVIIATNSSLEGETTAMYISKLIKPTGIRVSRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLLRALEGRVDL 199
>gi|160933399|ref|ZP_02080787.1| hypothetical protein CLOLEP_02244 [Clostridium leptum DSM 753]
gi|156867276|gb|EDO60648.1| hypothetical protein CLOLEP_02244 [Clostridium leptum DSM 753]
Length = 200
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ R+PG G ++A+R H+++ ++ A+A+ + + K+ CS+C N+
Sbjct: 9 LSRLVEQFERLPGIGRKTAQRLAYHVLQLPKKEAENFAQAILDAHEKIHYCSVCCNLTDQ 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C++C ++ R+ VI VVED D+ A ER+ + YHVL G +SPL IGP+ + I+
Sbjct: 69 ELCSVCRNEAREKGVICVVEDPRDVAAFERTHEYSGAYHVLHGVISPLGGIGPDQLKIKE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A + T+EG+ TA Y+ LK + +K+TRLAYGIP+G +L+Y D+
Sbjct: 129 LLDRVNRGGVKEVIMATNPTVEGEATAMYLSRLLKPLGIKVTRLAYGIPVGGDLEYADEV 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLSRALAGR 197
>gi|306835000|ref|ZP_07468049.1| recombination protein R [Corynebacterium accolens ATCC 49726]
gi|304569120|gb|EFM44636.1| recombination protein R [Corynebacterium accolens ATCC 49726]
Length = 219
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+
Sbjct: 7 LQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGGVRDGVTFCRICCNISRE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP+D+ I +
Sbjct: 67 DVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPKDLNIST 126
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++R+ + IRE+I A EG+ TA Y++ L+ D+
Sbjct: 127 LLQRLGGVLPDRELADSTPEAPLYDDTPTIREVILATDPNTEGEATAAYLVRLLRDFPDL 186
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 187 KITRLASGMPLGGDLEFVDELTLSRALSGR 216
>gi|309803527|ref|ZP_07697620.1| recombination protein RecR [Lactobacillus iners LactinV 11V1-d]
gi|309805424|ref|ZP_07699471.1| recombination protein RecR [Lactobacillus iners LactinV 09V1-c]
gi|309808230|ref|ZP_07702139.1| recombination protein RecR [Lactobacillus iners LactinV 01V1-a]
gi|312870933|ref|ZP_07731038.1| recombination protein RecR [Lactobacillus iners LEAF 3008A-a]
gi|312872172|ref|ZP_07732245.1| recombination protein RecR [Lactobacillus iners LEAF 2062A-h1]
gi|312873610|ref|ZP_07733657.1| recombination protein RecR [Lactobacillus iners LEAF 2052A-d]
gi|312875739|ref|ZP_07735734.1| recombination protein RecR [Lactobacillus iners LEAF 2053A-b]
gi|325912934|ref|ZP_08175308.1| recombination protein RecR [Lactobacillus iners UPII 60-B]
gi|329920994|ref|ZP_08277522.1| recombination protein RecR [Lactobacillus iners SPIN 1401G]
gi|308164411|gb|EFO66665.1| recombination protein RecR [Lactobacillus iners LactinV 11V1-d]
gi|308165242|gb|EFO67478.1| recombination protein RecR [Lactobacillus iners LactinV 09V1-c]
gi|308168518|gb|EFO70627.1| recombination protein RecR [Lactobacillus iners LactinV 01V1-a]
gi|311088731|gb|EFQ47180.1| recombination protein RecR [Lactobacillus iners LEAF 2053A-b]
gi|311090863|gb|EFQ49260.1| recombination protein RecR [Lactobacillus iners LEAF 2052A-d]
gi|311092256|gb|EFQ50627.1| recombination protein RecR [Lactobacillus iners LEAF 2062A-h1]
gi|311093623|gb|EFQ51962.1| recombination protein RecR [Lactobacillus iners LEAF 3008A-a]
gi|325477748|gb|EGC80886.1| recombination protein RecR [Lactobacillus iners UPII 60-B]
gi|328935270|gb|EGG31750.1| recombination protein RecR [Lactobacillus iners SPIN 1401G]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN+ T
Sbjct: 7 IAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I I++
Sbjct: 67 DPCEICSNANRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEINIKN 126
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++Y +
Sbjct: 127 LIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 ITLKRAVQGRISL 199
>gi|323705218|ref|ZP_08116794.1| recombination protein RecR [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535644|gb|EGB25419.1| recombination protein RecR [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 118/195 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI L+R+PG G ++A+R +++ + L+ A+ N + C C
Sbjct: 2 NVYSRSLSRLIDELSRLPGIGRKTAQRLAFYILDMPLDDVVNLSNAILEAKNNLRYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N ++ C+IC D+ RD I VV D D+ A+E+++ LYHVL G++SP+D IGPE
Sbjct: 62 YNFTDSELCSICSDETRDTHTICVVSDPKDVVAMEKTREYRGLYHVLHGAISPMDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ERI+ +I E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLERIKDAEINEIILATNPDIEGEATAMYIAKLIKPFGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D T+ A+ R
Sbjct: 182 EYTDSVTLSRALEGR 196
>gi|104774439|ref|YP_619419.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514538|ref|YP_813444.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274730|sp|Q048W6|RECR_LACDB RecName: Full=Recombination protein recR
gi|122983905|sp|Q1G921|RECR_LACDA RecName: Full=Recombination protein recR
gi|103423520|emb|CAI98422.1| Recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093853|gb|ABJ59006.1| DNA replication and repair protein RecR [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126249|gb|ADY85579.1| Recombination protein recR [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN+
Sbjct: 7 IARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGNITEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I I+S
Sbjct: 67 DPCAICSNPVRDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIEYANL 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTEL 199
>gi|304440575|ref|ZP_07400461.1| recombination protein R [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370951|gb|EFM24571.1| recombination protein R [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 196
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 120/191 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +ENLI L ++PG G +SA R +++++ ++ LA+A+ + + CSIC N
Sbjct: 3 RPLENLIYELTKLPGVGDKSAERILYYILEQDKEEARGLAKAIVDAAENIEECSICHNFT 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC D+ RD + I VVE D+ ++E++ + + LYHVL G++ P I P D+
Sbjct: 63 DDDPCDICTDESRDRTTICVVERPRDVASMEKTNSYHGLYHVLHGTVQPTRGIFPSDLRF 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL++R++ I+E+I A + T +G TTA YI + LK V +TR+A+GIP+G L+Y D
Sbjct: 123 ASLVKRVKDGGIKEVIIATNPTTDGDTTAMYIQEALKDTGVLMTRIAHGIPVGGNLEYYD 182
Query: 188 DGTIFEAIRSR 198
+ TI A+++R
Sbjct: 183 ELTIETALKNR 193
>gi|256826614|ref|YP_003150573.1| DNA replication and repair protein RecR [Cryptobacterium curtum DSM
15641]
gi|256582757|gb|ACU93891.1| DNA replication and repair protein RecR [Cryptobacterium curtum DSM
15641]
Length = 198
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I+ L+ AR+PG GP+SA+R ++ L+ A+ + + V CS C N
Sbjct: 3 SAPSIQTLLDEFARLPGIGPKSAQRMVYWILNSDRASAERLSRAIMEVKDTVHFCSRCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC +RD +I VV + D+ +ER+ A +YHVLGG+LSPL+ IGP+ +
Sbjct: 63 YAEGDLCEICASPKRDQGIICVVSEPRDIPPIERTAAFMGVYHVLGGALSPLEGIGPDQL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ ++ E+I A + +EG+TTA Y+ ++ +++K+TRLA G+P+G +L++
Sbjct: 123 HINELMRRLSDPQVTEVILATNPNVEGETTASYLARLIRPLNIKVTRLASGLPVGGDLEF 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI SR V+
Sbjct: 183 ADEVTLSRAIESRRVI 198
>gi|74316535|ref|YP_314275.1| recombination protein RecR [Thiobacillus denitrificans ATCC 25259]
gi|123612290|sp|Q3SLE3|RECR_THIDA RecName: Full=Recombination protein recR
gi|74056030|gb|AAZ96470.1| RecR protein [Thiobacillus denitrificans ATCC 25259]
Length = 197
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKK----KEQLLGPLAEAMANIYNKVCLCSICGN 65
+E+LI L +PG GP+SA R HL+++ E L G L A+ ++++ C +C N
Sbjct: 6 LESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHH----CRLCNN 61
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C +C +RD + VVE AD +E +++ N LY VL G LSPLD IGP +I
Sbjct: 62 FSEAEVCEVCASTRRDRRQLAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPREI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LI R + E+I A + T EG+ TAH I + LK +K++RLA G+P+G EL+Y
Sbjct: 122 HLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLKARGLKVSRLARGVPVGGELEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ +A+R R L
Sbjct: 182 VDSGTLAQAVRDRRAL 197
>gi|300362309|ref|ZP_07058485.1| recombination protein R [Lactobacillus gasseri JV-V03]
gi|300353300|gb|EFJ69172.1| recombination protein R [Lactobacillus gasseri JV-V03]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + E + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|309810105|ref|ZP_07703951.1| recombination protein RecR [Lactobacillus iners SPIN 2503V10-D]
gi|308169604|gb|EFO71651.1| recombination protein RecR [Lactobacillus iners SPIN 2503V10-D]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN+ T
Sbjct: 7 IAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGNITDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I I++
Sbjct: 67 DPCEICSNPNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEINIKN 126
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++Y +
Sbjct: 127 LIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ R L
Sbjct: 187 ITLKRAVQGRISL 199
>gi|169824211|ref|YP_001691822.1| recombination protein [Finegoldia magna ATCC 29328]
gi|297587502|ref|ZP_06946146.1| recombination protein R [Finegoldia magna ATCC 53516]
gi|303234906|ref|ZP_07321531.1| recombination protein RecR [Finegoldia magna BVS033A4]
gi|226739005|sp|B0S0K8|RECR_FINM2 RecName: Full=Recombination protein recR
gi|167831016|dbj|BAG07932.1| recombination protein [Finegoldia magna ATCC 29328]
gi|297574191|gb|EFH92911.1| recombination protein R [Finegoldia magna ATCC 53516]
gi|302494024|gb|EFL53805.1| recombination protein RecR [Finegoldia magna BVS033A4]
Length = 202
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++ LIK L+ +P G +SARR ++ + + L E++ N+ + C+ CGN+
Sbjct: 6 KAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKTNIRPCANCGNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC DQ+RD SVI VVED ++ ++E++ N YHVLGG LSP D I P+D+ +
Sbjct: 66 DKKLCDICSDQKRDNSVITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQDLNL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185
++L R + ++E+I A+S T G T ++I++ LK +VK++R+A G+P+G+ L+Y
Sbjct: 126 ENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGANLEY 185
Query: 186 LDDGTIFEAIRSR 198
D+ ++++AI R
Sbjct: 186 YDEMSLYKAILDR 198
>gi|161506950|ref|YP_001576904.1| recombination protein RecR [Lactobacillus helveticus DPC 4571]
gi|172048178|sp|A8YTF7|RECR_LACH4 RecName: Full=Recombination protein recR
gi|160347939|gb|ABX26613.1| Recombinational DNA repair protein [Lactobacillus helveticus DPC
4571]
gi|328462875|gb|EGF34724.1| recombination protein RecR [Lactobacillus helveticus MTCC 5463]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI R+PG G ++A R + + E+ + ++A+ + N + C ICGN+
Sbjct: 7 IAHLIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I I+S
Sbjct: 67 EVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ ++E+I A+++T EG++TA YI +K ++K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAEIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTAL 199
>gi|312793325|ref|YP_004026248.1| recombination protein recr [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877253|ref|ZP_07737221.1| recombination protein RecR [Caldicellulosiruptor lactoaceticus 6A]
gi|311795967|gb|EFR12328.1| recombination protein RecR [Caldicellulosiruptor lactoaceticus 6A]
gi|312180465|gb|ADQ40635.1| recombination protein RecR [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 123/198 (62%), Gaps = 2/198 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+K I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC
Sbjct: 1 MQQK--ENSISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C+IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 KVCCNFTEDEVCSICKDEKRDRSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +++E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLMKRLSDPQVKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSR 198
+++Y D+ TI +AI R
Sbjct: 179 GDIEYADEVTILKAIEGR 196
>gi|215432694|ref|ZP_03430613.1| recombination protein RecR [Mycobacterium tuberculosis EAS054]
gi|289755846|ref|ZP_06515224.1| recombination protein recr [Mycobacterium tuberculosis EAS054]
gi|289696433|gb|EFD63862.1| recombination protein recr [Mycobacterium tuberculosis EAS054]
Length = 203
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTSVLAKVRDGVRFCAVCGNVSDN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 ERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ + E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R VL
Sbjct: 186 FADELTLGRALAGRRVL 202
>gi|291006687|ref|ZP_06564660.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 2338]
gi|172044197|sp|A4F6D1|RECR_SACEN RecName: Full=Recombination protein recR
Length = 198
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + + L E + + V C ICGNV
Sbjct: 6 VQDLIDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICGNVSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + ++
Sbjct: 66 PTCRICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQLRVRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGSELDYLDD 188
L+ RI +I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+
Sbjct: 126 LLTRIGRDEITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDLEFADE 185
Query: 189 GTIFEAIRSR 198
T+ A+ R
Sbjct: 186 LTLGRALSGR 195
>gi|295107931|emb|CBL21884.1| recombination protein RecR [Ruminococcus obeum A2-162]
Length = 199
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 122/193 (63%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L+ +PG GP+SA+R H++ + + LA ++ K+ C C +
Sbjct: 7 HINKLIEQLSHLPGIGPKSAQRLAFHIMNMPKDQVEQLASSITGAREKIRYCKKCCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +RDA I+VVE+ DL A E++ +YHVL G++SP+ IGP+DI ++
Sbjct: 67 QELCPICSNPKRDAGTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPDDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + I+E+I A ++++EG+TTA YI +K ++++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQSEDIKEVIIATNSSLEGETTAMYISKLIKPTGIRVSRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLLRALEGRVDL 199
>gi|116622273|ref|YP_824429.1| recombination protein RecR [Candidatus Solibacter usitatus
Ellin6076]
gi|122254206|sp|Q022F6|RECR_SOLUE RecName: Full=Recombination protein recR
gi|116225435|gb|ABJ84144.1| recombination protein RecR [Candidatus Solibacter usitatus
Ellin6076]
Length = 199
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 119/186 (63%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI R+PG G +SA+R H+++ K + L++A+ ++ +K+ LC++C N+ + C
Sbjct: 11 LITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAVCNNIADGEIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C D RD SV+ VVE+ ++ +E ++ YHVL G+LSPL +GP+ + I+ L+E
Sbjct: 71 QYCSDSNRDPSVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGPDMLKIKGLVE 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI ++RE+I A + +EG+ TA Y+ LK + VK+TR+ GIP+GS+L++ D+ TI
Sbjct: 131 RIGQGEVREVIVATNPNVEGEATAVYLARLLKPLGVKVTRIGMGIPVGSDLEFADEVTIS 190
Query: 193 EAIRSR 198
+A+ R
Sbjct: 191 KAMEGR 196
>gi|170017865|ref|YP_001728784.1| recombination protein RecR [Leuconostoc citreum KM20]
gi|238688935|sp|B1MVT6|RECR_LEUCK RecName: Full=Recombination protein recR
gi|169804722|gb|ACA83340.1| Recombination protein RecR [Leuconostoc citreum KM20]
Length = 201
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV--D 67
I LI ++PG GP++A R + + +E + ++++ + + C ICGN+ +
Sbjct: 7 IAKLINSYTKLPGIGPKTATRLAFYTLGMQEDDVVDFSKSLLSAKKDLTFCRICGNITEN 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ +PCAIC D+ RD S + VVE+ D+ A+E ++ LYHVL G +SP GPEDI +
Sbjct: 67 SVNPCAICQDKSRDQSTVFVVENSRDVMAMENTRDYYGLYHVLNGVISPSAGTGPEDINL 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ + ++I E+I +A EG+ TA Y+ LK +K+TRLA+G+ +GS++DY
Sbjct: 127 PSLIRRLSDHQEINEVIVGTNANAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIDYA 186
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A++ RT L
Sbjct: 187 DQLTLIKAVQGRTEL 201
>gi|282890065|ref|ZP_06298598.1| hypothetical protein pah_c010o058 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500071|gb|EFB42357.1| hypothetical protein pah_c010o058 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 200
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 2/190 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV-DTTD 70
LI++L ++PG G RSA R L++ E+ L ++ + K+ CS CG + +
Sbjct: 9 KLIQVLKKLPGVGARSAERFAFQLMEWDEEKLREFGTILSQVPEKIQACSACGCLKEEAG 68
Query: 71 PCAICIDQQRDASVII-VVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C D R AS I+ V+ D++++E ++ LYHVLGG LSPLD GPE + + S
Sbjct: 69 GCPFCDDLVRQASQILCVISSPRDVFSIEETREYKGLYHVLGGLLSPLDGFGPERLSLAS 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L RIE+ +I E++ A+ +T+EG TA YI +L + V+++RLAYG+P+GS LDY+D G
Sbjct: 129 LKGRIEIHQIHEVVIALGSTLEGDATALYIKRELGTLPVQVSRLAYGLPVGSSLDYVDGG 188
Query: 190 TIFEAIRSRT 199
T+ A R
Sbjct: 189 TLARAFSGRA 198
>gi|256840750|ref|ZP_05546258.1| recombination protein RecR [Parabacteroides sp. D13]
gi|256738022|gb|EEU51348.1| recombination protein RecR [Parabacteroides sp. D13]
Length = 208
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 122/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C
Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G
Sbjct: 121 GPSDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIINRT 199
>gi|323487367|ref|ZP_08092666.1| hypothetical protein HMPREF9474_04417 [Clostridium symbiosum
WAL-14163]
gi|323694198|ref|ZP_08108374.1| recombination protein RecR [Clostridium symbiosum WAL-14673]
gi|323399328|gb|EGA91727.1| hypothetical protein HMPREF9474_04417 [Clostridium symbiosum
WAL-14163]
gi|323501671|gb|EGB17557.1| recombination protein RecR [Clostridium symbiosum WAL-14673]
Length = 199
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ L+++PG G +SA+R H++ + + L+ AM + + V CS C +
Sbjct: 6 NQITKLIEELSKLPGIGSKSAQRLAFHIINMPSEQVERLSSAMVDAKHNVRYCSECFTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +RD I+VVE+ DL A E++ +YHVL G++SP+ IGP DI +
Sbjct: 66 DKELCPICSSDRRDHGTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPNDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ ++E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D
Sbjct: 126 KELMTRLQKDDVKEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYID 185
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 186 EVTLLRALDGRTEL 199
>gi|317055946|ref|YP_004104413.1| recombination protein RecR [Ruminococcus albus 7]
gi|315448215|gb|ADU21779.1| recombination protein RecR [Ruminococcus albus 7]
Length = 200
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 114/187 (60%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A++PG G +SA+R H+++ ++ A A+ N++ V LC C N C
Sbjct: 12 LTEQFAKLPGIGMKSAQRLAYHVMRMSDKDAEAFANAVLNVHKNVHLCKECQNYTDRQLC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD VI VVE D+ A+ER+ +YHVL G +SP++ + P+D+ I+ L+
Sbjct: 72 PICDDDRRDHGVICVVESPQDITAIERTGEYKGVYHVLHGLISPINGVSPDDLKIKELLA 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI E+I A + T+EG TA YI LK + VK+TRLA+G+P+G +L+Y D+ T++
Sbjct: 132 RINSGTADEVIMATNPTVEGDATAFYISKLLKPLGVKVTRLAFGLPIGGQLEYADEITLY 191
Query: 193 EAIRSRT 199
+A+ +R
Sbjct: 192 KALENRN 198
>gi|255028849|ref|ZP_05300800.1| recombination protein RecR [Listeria monocytogenes LO28]
Length = 179
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 112/173 (64%)
Query: 26 RSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVI 85
+SA R +++ KE + A+A+ + + CS+CG++ DPC IC D RD SVI
Sbjct: 4 KSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVI 63
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I L++R++ I E+I A
Sbjct: 64 CVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILA 123
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +EG+ TA YI LK +K+TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 124 TNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGR 176
>gi|308235603|ref|ZP_07666340.1| recombination protein RecR [Gardnerella vaginalis ATCC 14018]
gi|311113931|ref|YP_003985152.1| recombination protein R [Gardnerella vaginalis ATCC 14019]
gi|310945425|gb|ADP38129.1| recombination protein R [Gardnerella vaginalis ATCC 14019]
Length = 202
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +I +++PG GP+ A+R +++ + L A++++ V C ICGNV
Sbjct: 11 IGRVIDAFSKLPGIGPKGAQRIAFYILSSSDVQTQDLIGAISDLRENVRFCEICGNVCEQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC IC D +RD + I VVE+ D+ ++ER+ +YHVLGG+++P+ +GP D+ I
Sbjct: 71 SPCVICQDPRRDHTKICVVEEPKDIMSIERTHEYAGVYHVLGGAINPMANVGPADLKITQ 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++E+I A+ IEG+ T Y+ L+ +D+ ITRLA G+P+G +L+Y D+
Sbjct: 131 LLERLKDAQVKEVILALDPNIEGEATVTYLARLLEPLDISITRLASGLPVGGDLEYADEI 190
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 191 TLGRAFAGR 199
>gi|288800003|ref|ZP_06405462.1| recombination protein RecR [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333251|gb|EFC71730.1| recombination protein RecR [Prevotella sp. oral taxon 299 str.
F0039]
Length = 205
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 125/190 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + L+++PG G ++A R LHL+++ E + + ++ + ++ C+ C NV T
Sbjct: 12 LEKAVGELSKLPGVGRKTALRLALHLLRQNESEVETFSSSILKMKQEIKHCNCCHNVSDT 71
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD++V+ VVE++ D+ A+E ++ N LYHVLGG +SP+D IGP DI I S
Sbjct: 72 EICPICADARRDSTVVCVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGIGPADIEIDS 131
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ ++E+IFA+ +T+EG TT YI +L V +T +A GI +G+EL+Y D+
Sbjct: 132 LVERVSQGGVKEIIFALGSTMEGDTTNFYISKRLASYGVLLTVIARGISVGNELEYTDEV 191
Query: 190 TIFEAIRSRT 199
T+ +I +RT
Sbjct: 192 TLGRSILNRT 201
>gi|169335256|ref|ZP_02862449.1| hypothetical protein ANASTE_01664 [Anaerofustis stercorihominis DSM
17244]
gi|169257994|gb|EDS71960.1| hypothetical protein ANASTE_01664 [Anaerofustis stercorihominis DSM
17244]
Length = 201
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K I NLI L+++PG G ++A R +++ ++ + L+EA+ ++ CSIC
Sbjct: 3 VYSKPILNLINELSKLPGVGRKTASRLAYYIINMEQSDVDSLSEAIKVAKKELKYCSICY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC +RD S I+VV + DL A+E++K N LYHVLGG +SP++ I ED
Sbjct: 63 NITDKDPCDICSSTKRDKSTILVVSESKDLIAIEKTKEYNGLYHVLGGVISPMEGIMVED 122
Query: 125 IGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSE 182
I I+ LI RI + E+I A +EG+TTA I LK DVK+TR+A G+P G++
Sbjct: 123 IRIKELISRIGTSDDVEEVILATGFNVEGETTAMVIKKLLKPFDDVKVTRIAKGLPQGAD 182
Query: 183 LDYLDDGTIFEAIRSRT 199
L+Y D T+ AI R
Sbjct: 183 LEYTDGATLANAIIGRN 199
>gi|160946874|ref|ZP_02094077.1| hypothetical protein PEPMIC_00835 [Parvimonas micra ATCC 33270]
gi|158447258|gb|EDP24253.1| hypothetical protein PEPMIC_00835 [Parvimonas micra ATCC 33270]
Length = 202
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 120/192 (62%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I+ +I L+++P G +SA + L +++ + A+++ N+ C ICGN+
Sbjct: 6 KSIDEVIHYLSKLPSIGRKSATKMALKILEMDDDFTIEFAKSLINMKKNTHHCKICGNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++RD S+I VVED+ + +LE++K YH+L G ++P + I +D+ +
Sbjct: 66 EDEICNICADEKRDKSIITVVEDMQGVISLEKTKVYKGTYHILNGLVTPREGITLDDLNV 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYL 186
SL+ERIE ++E+IFAIS TI+G+ T YI+D LK D+KI+++A GIP+G +D
Sbjct: 126 DSLLERIEKDNVKEVIFAISQTIDGELTELYIVDLLKNFKDLKISKIANGIPVGRSIDSY 185
Query: 187 DDGTIFEAIRSR 198
D+ T +A+ R
Sbjct: 186 DELTFLKALEDR 197
>gi|77166053|ref|YP_344578.1| RecR protein [Nitrosococcus oceani ATCC 19707]
gi|254436341|ref|ZP_05049847.1| recombination protein RecR [Nitrosococcus oceani AFC27]
gi|123593516|sp|Q3J7Z8|RECR_NITOC RecName: Full=Recombination protein recR
gi|76884367|gb|ABA59048.1| DNA replication and repair protein RecR [Nitrosococcus oceani ATCC
19707]
gi|207088031|gb|EDZ65304.1| recombination protein RecR [Nitrosococcus oceani AFC27]
Length = 199
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 121/195 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ G + L++ L +PG GP+SA+R HL++ + LA+A+ +K+ C C
Sbjct: 2 SLFGLSLGRLLEALRCLPGVGPKSAQRMAFHLLESDREGGRHLAQALLEALDKMTHCQTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TD C++C D +RD + VVE +D+ A+E++ + + Y VL G LSPLD +GPE
Sbjct: 62 RILSETDLCSLCADSRRDRGQLCVVEMPSDVQAIEQATSYSGRYFVLMGHLSPLDGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+G+ L +R++ +IRE+I A + T+EG+ TA+YI + + + TR+A+G+P+G EL
Sbjct: 122 ALGMDLLAKRLDTDQIREVILATNLTVEGEATAYYISELAQTRGITTTRIAHGVPLGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+++D T+ A +SR
Sbjct: 182 EFIDSNTLSHAFQSR 196
>gi|304384141|ref|ZP_07366594.1| recombination protein R [Prevotella marshii DSM 16973]
gi|304334768|gb|EFM01045.1| recombination protein R [Prevotella marshii DSM 16973]
Length = 204
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M++ K +E + A++PG G ++A R LHL+++ + ++A+A + +V C
Sbjct: 2 MEQAYPSKLLEKAVSEFAKLPGIGRKTALRLVLHLLRRDVDEVETFSQAVARLRTEVKHC 61
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ D C IC+D +R+ S + VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 62 RVCHNISDEDVCPICMDNRRERSTLCVVENIQDVMAIENTQQFNGLYHVLGGVISPMDGV 121
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ER+ E+I A+S+T+EG TT Y+ KL VK++ +A GI +G
Sbjct: 122 GPGDLEIDSLVERVAGGGFSEIILALSSTMEGDTTNFYLSRKLSPYGVKLSVIARGISVG 181
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT L
Sbjct: 182 DELEYTDEVTLGRSITNRTAL 202
>gi|312200645|ref|YP_004020706.1| recombination protein RecR [Frankia sp. EuI1c]
gi|311231981|gb|ADP84836.1| recombination protein RecR [Frankia sp. EuI1c]
Length = 199
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L +PG GP+SA+R H++ + LA+A+ + KV C IC NV
Sbjct: 6 VQDLIDELGALPGIGPKSAQRIAFHILAADPADVRRLAKALLEVKEKVQFCRICFNVAQA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I+
Sbjct: 66 ELCRICADPRRDTTVICVVEESKDVVAVERTREFRGRYHVLGGAINPIGGVGPDDLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + ELI A EG+ TA Y+ ++ + + ++RLA G+PMG +L++ D+
Sbjct: 126 LIARLADGTVTELILATDPNTEGEVTASYLARQIGPMGLTVSRLASGLPMGGDLEWADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R V+
Sbjct: 186 TLGRAFEGRRVV 197
>gi|124022680|ref|YP_001016987.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9303]
gi|171769768|sp|A2C8B2|RECR_PROM3 RecName: Full=Recombination protein recR
gi|123962966|gb|ABM77722.1| RecR protein [Prochlorococcus marinus str. MIT 9303]
Length = 189
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I R+PG GPR+A+R LHL+++ E + AEA+ ++V C C ++ C
Sbjct: 1 MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D R ++ VV D DL ALER++ YHVLGG +SP+D IGP+ + I SLI+
Sbjct: 61 DICRDGTRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQ 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D+ T+
Sbjct: 121 RVDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYADEVTLT 179
Query: 193 EAIRSRTVL 201
A+ R +
Sbjct: 180 RALEGRRAM 188
>gi|290580906|ref|YP_003485298.1| putative recombination protein [Streptococcus mutans NN2025]
gi|254997805|dbj|BAH88406.1| putative recombination protein [Streptococcus mutans NN2025]
Length = 199
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + ++ + A+ + ++ C +CGN+
Sbjct: 7 IAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAAKRELTYCFVCGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD S ++VVED D+ A+E+ + + LYHVL G +SP++ IGP+DI ++S
Sbjct: 67 DPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGIGPDDINLKS 126
Query: 130 LIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + I E+I A +AT +G+ TA YI LK + +TRLA G+ +GS+++Y D+
Sbjct: 127 LLTRLRDNSDIHEVIIATNATADGEATAMYISRVLKPAGITVTRLARGLAVGSDIEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 VTLLRAIENRTEL 199
>gi|116629041|ref|YP_814213.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus
gasseri ATCC 33323]
gi|282852747|ref|ZP_06262089.1| recombination protein RecR [Lactobacillus gasseri 224-1]
gi|311111163|ref|ZP_07712560.1| recombination protein RecR [Lactobacillus gasseri MV-22]
gi|122273961|sp|Q045U7|RECR_LACGA RecName: Full=Recombination protein recR
gi|116094623|gb|ABJ59775.1| DNA replication and repair protein RecR [Lactobacillus gasseri ATCC
33323]
gi|282556489|gb|EFB62109.1| recombination protein RecR [Lactobacillus gasseri 224-1]
gi|311066317|gb|EFQ46657.1| recombination protein RecR [Lactobacillus gasseri MV-22]
Length = 199
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + E + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLIQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|325919109|ref|ZP_08181168.1| DNA replication and repair protein RecR [Xanthomonas gardneri ATCC
19865]
gi|325550418|gb|EGD21213.1| DNA replication and repair protein RecR [Xanthomonas gardneri ATCC
19865]
Length = 198
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA +AN KV C+ C + +
Sbjct: 6 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCAQCRDFTES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC RD + VVE AD A+E + LY +L G LSPLD IGP ++G+
Sbjct: 66 EICAICASASRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDR 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 126 LGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 186 TLSHAFGTRS 195
>gi|284049058|ref|YP_003399397.1| recombination protein RecR [Acidaminococcus fermentans DSM 20731]
gi|283953279|gb|ADB48082.1| recombination protein RecR [Acidaminococcus fermentans DSM 20731]
Length = 198
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 125/191 (65%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + L + L R+PG G +SA R H++ K + + LA A+ ++ + V LC C ++
Sbjct: 5 KPLARLHEQLRRLPGIGSKSALRLAYHVLDMKREDVEELARALLDVKDHVHLCRQCFDLC 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++RD S++ VVE D+ A+ER++ LYHVL G LSPLD +GP+ + I
Sbjct: 65 EGELCEICQDEKRDRSLVCVVEQPQDVAAMERTRGYQGLYHVLHGVLSPLDGVGPDQLKI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ ++E+I A ++ +EG+ TA+Y+ ++ +K++R+A+G+P+G +L+Y D
Sbjct: 125 RELLLRLQKGTVKEVIIATNSDVEGEATANYLAGLIRPTGIKVSRIAHGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSR 198
+ T+++A+ +R
Sbjct: 185 ELTLYKALENR 195
>gi|256374360|ref|YP_003098020.1| recombination protein RecR [Actinosynnema mirum DSM 43827]
gi|255918663|gb|ACU34174.1| recombination protein RecR [Actinosynnema mirum DSM 43827]
Length = 197
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + +G L +A+ + V C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLAAEPADIGRLQDALQKVKEGVVFCEVCGNVSAE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 TTCRICRDPRRDLTLICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPDQLRIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
L+ RI + E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+
Sbjct: 126 LLTRIGT-DVSEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDLEFADE 184
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 185 LTLGRALSGRRSL 197
>gi|325954178|ref|YP_004237838.1| recombination protein recR [Weeksella virosa DSM 16922]
gi|323436796|gb|ADX67260.1| Recombination protein recR [Weeksella virosa DSM 16922]
Length = 205
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 115/192 (59%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K +E + ++++PG G R+A R LH++ + LAEA+ ++ + C C +
Sbjct: 6 SKVLERAVNEMSQLPGIGKRTALRLVLHMLNRPHTQTLRLAEALTHLVEDIQYCETCHTL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T C IC + RD S+I VVEDV D+ A+E + +YHVLGG +SP++ IGP +
Sbjct: 66 SDTPICEICSNPLRDHSIICVVEDVRDVMAIENTGQYRGVYHVLGGRISPMEGIGPSQLK 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I SL++R + +E+IFA+S+T+EG TT Y+ +LK + T +A GI +G EL+Y
Sbjct: 126 IDSLVKRAAEESTKEIIFALSSTMEGDTTVFYLFKQLKDFPLFYTTIARGIGVGDELEYA 185
Query: 187 DDGTIFEAIRSR 198
D+ T+ +I +R
Sbjct: 186 DEATLIRSIENR 197
>gi|152980835|ref|YP_001354018.1| recombination protein RecR [Janthinobacterium sp. Marseille]
gi|172049091|sp|A6T0H1|RECR_JANMA RecName: Full=Recombination protein recR
gi|151280912|gb|ABR89322.1| Recombinational DNA repair protein (RecF pathway)
[Janthinobacterium sp. Marseille]
Length = 198
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 114/193 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L + L R+PG GP+SA+R HL++ L A++ KV C++C
Sbjct: 3 TPSSLDFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVEKVQHCAMCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C+D +R+ +++ VVE D +E++ LY VL G LSPLD IGP+DI
Sbjct: 63 FTEHEVCETCLDAERNPALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ LI R ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 123 HLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSR 198
+D GTI A+ R
Sbjct: 183 VDAGTIARAMLDR 195
>gi|91775927|ref|YP_545683.1| recombination protein RecR [Methylobacillus flagellatus KT]
gi|123254387|sp|Q1H0Z5|RECR_METFK RecName: Full=Recombination protein recR
gi|91709914|gb|ABE49842.1| DNA replication and repair protein RecR [Methylobacillus
flagellatus KT]
Length = 199
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 119/189 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA R +L+++ + G LA+++ V C++C N
Sbjct: 7 LEQLVEALRCLPGVGPKSALRMAYYLLQRDRKGAGILAKSLDQALQVVSHCNLCNNFSEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C RD +++ +VE +DL LE+++ +Y VL G LSPLD IGP DI +
Sbjct: 67 EICPLCASPARDRTLLCIVEMPSDLMMLEQTQTYQGMYFVLMGRLSPLDGIGPRDIHLDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R + K+ E+I A + T+EG+ TAHY+ + L+ ++++R+A G+PMG E++++D G
Sbjct: 127 LLKRAQDGKVEEVILATNYTVEGEATAHYVSELLRARGIQVSRIARGLPMGGEIEHVDSG 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAQALLER 195
>gi|313906300|ref|ZP_07839643.1| recombination protein RecR [Eubacterium cellulosolvens 6]
gi|313468856|gb|EFR64215.1| recombination protein RecR [Eubacterium cellulosolvens 6]
Length = 199
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ + R+PG GP++A+R H++ E+ + LA ++ V C ICG +
Sbjct: 7 HIGRLIEQMGRLPGIGPKTAQRLAFHIIGMSEEHVKELASSITEAKANVRYCKICGTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + R+ I+VVE+ DL A E+++ + +YHVL G++SP+ IGP+DI ++
Sbjct: 67 QEICPICANPSRNHREIMVVENSRDLAAYEKTQKYDGVYHVLNGAISPMLGIGPDDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA YI ++ +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-DDVDEVIIATNSSLEGETTAMYISKLIRPTGIKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTEL 198
>gi|291523177|emb|CBK81470.1| recombination protein RecR [Coprococcus catus GD/7]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ L+++PG G +SA+R H++ + + LA + + K+ CS C N+
Sbjct: 6 NQINKLIEELSKLPGIGAKSAQRLAFHIINMPKDQVQNLAGTIVSAREKIRYCSCCWNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
++ C IC + +RD VI+VVE DL A E+++ +YHVL G++SP+ IGP DI +
Sbjct: 66 DSELCPICANPKRDHHVIMVVETPRDLAAYEKTQKYEGVYHVLHGAISPMLGIGPSDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ + E+I A ++T+EG+TTA YI +K +K+TR+A G+P+G +L+Y+D
Sbjct: 126 KELMTRLQ-GDVTEVIIATNSTLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTEL 198
>gi|227510685|ref|ZP_03940734.1| recombination protein RecR [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227513701|ref|ZP_03943750.1| recombination protein RecR [Lactobacillus buchneri ATCC 11577]
gi|227522509|ref|ZP_03952558.1| recombination protein RecR [Lactobacillus hilgardii ATCC 8290]
gi|227083020|gb|EEI18332.1| recombination protein RecR [Lactobacillus buchneri ATCC 11577]
gi|227090331|gb|EEI25643.1| recombination protein RecR [Lactobacillus hilgardii ATCC 8290]
gi|227189806|gb|EEI69873.1| recombination protein RecR [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 199
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + V + + + A+ + CSICGN+
Sbjct: 7 IAKLIDSYMKLPGIGNKTATRLAFYTVDMNKDDVKEFSHALLATKEDLHYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D+ RD + I+VVE D+ +E+ + + LYHVL G LSP++ GPED+ I S
Sbjct: 67 DPCEICRDKTRDQTKILVVEQPKDIMVMEKVQEYHGLYHVLHGVLSPIEGKGPEDLNITS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +++E+I A +AT EG+ TA Y+ +K +++TRLA+G+ +G++++Y D+
Sbjct: 127 LIRRLQKNGEVKEVIVATNATPEGEATAMYLSKLIKPAGIRVTRLAHGLSVGTDIEYADE 186
Query: 189 GTIFEAIRSRT 199
T+F+A++ RT
Sbjct: 187 MTLFKAVQGRT 197
>gi|319793178|ref|YP_004154818.1| recombination protein recr [Variovorax paradoxus EPS]
gi|315595641|gb|ADU36707.1| recombination protein RecR [Variovorax paradoxus EPS]
Length = 196
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ L R+PG G +SA R HL++ L+ A+ V C +C
Sbjct: 5 SSLDALVDALRRLPGVGVKSASRMAFHLLQHDRDGAQLLSRALQQAAGNVRHCELCNTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C++C+D +RD + + VVE AD ALER+ A Y VL G LSPLD IGP+DIG+
Sbjct: 65 EAPICSVCMDSRRDGTKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPKDIGL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L +R + E+I A + T EG+ TAH I + LK + +TRLA G+P GSEL+Y+D
Sbjct: 125 QKLFDRALDGTVSEVILATNFTAEGEATAHVIGEALKQRGLTVTRLARGVPAGSELEYVD 184
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 185 LGTIAHALVDR 195
>gi|160872916|ref|ZP_02063048.1| recombination protein RecR [Rickettsiella grylli]
gi|159121715|gb|EDP47053.1| recombination protein RecR [Rickettsiella grylli]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG GP+SA+R HL++K LA+ + ++ C C N+ T
Sbjct: 7 ISQLISQFCCLPGVGPKSAQRMVFHLLEKARGDALTLAKMITQTVQEIGNCEHCRNLSET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C + R+ ++ VVE D+ A+E++ + Y VL G LSPLD IGP+++GI
Sbjct: 67 PICALCSNPNRERRLLCVVETPVDVLAIEQTGSYRGYYFVLMGRLSPLDGIGPKELGIHY 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
I+RI + +E+I A + T+EG+ TAHY+ + +K +K++R+A+G+P+GSEL+++D+
Sbjct: 127 FIQRINTQLPQEIILATNPTVEGEATAHYLTELIKQKGIKLSRIAHGVPLGSELEFIDNH 186
Query: 190 TIFEAIRSRTVL 201
T+ ++ SR +
Sbjct: 187 TLARSLTSRVTI 198
>gi|195977777|ref|YP_002123021.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225868924|ref|YP_002744872.1| recombination protein RecR [Streptococcus equi subsp.
zooepidemicus]
gi|238689805|sp|B4U1Z1|RECR_STREM RecName: Full=Recombination protein recR
gi|259563706|sp|C0MCW0|RECR_STRS7 RecName: Full=Recombination protein recR
gi|195974482|gb|ACG62008.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225702200|emb|CAW99924.1| recombination protein RecR [Streptococcus equi subsp.
zooepidemicus]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD I+VVE D+ A+E+ + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 DPCHICTDSSRDKETILVVEASKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMAGEATEVIVATNATADGEATAMYISRILKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|237749100|ref|ZP_04579580.1| recombinational DNA repair protein [Oxalobacter formigenes OXCC13]
gi|229380462|gb|EEO30553.1| recombinational DNA repair protein [Oxalobacter formigenes OXCC13]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ +PG GP+SA+R HL++ L+ A+AN + V C C +
Sbjct: 7 LQQLIEAFRHLPGIGPKSAQRMAYHLLQHDRDGAQQLSVALANAISSVRHCERCNTFTES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C DQ+RDAS++ + E AD +E++ Y VL GSLSPLD IGP++I
Sbjct: 67 EVCEMCSDQERDASLLCITETPADQMMIEQTLTFKGYYFVLMGSLSPLDGIGPKEIHFDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R ++E++ A S EG+ TAHYI + LK ++++RLA G+P+G+EL+Y+D G
Sbjct: 127 LIKRATDGIVKEVVLATSFNNEGEATAHYISEMLKVRGIRVSRLARGVPVGAELEYVDVG 186
Query: 190 TIFEAIRSR 198
TI A R
Sbjct: 187 TIARAFLDR 195
>gi|46447358|ref|YP_008723.1| recombination protein RecR [Candidatus Protochlamydia amoebophila
UWE25]
gi|73621502|sp|Q6MAF1|RECR_PARUW RecName: Full=Recombination protein recR
gi|46400999|emb|CAF24448.1| probable recombination protein RecR [Candidatus Protochlamydia
amoebophila UWE25]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI IL + PG G +SA R HL+ + L L+E + N +K+ C CG + C
Sbjct: 10 LIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNCGCLTDEAAC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C QRD+ +I V D++++E + LYHVLGG LSPL+ GPE + I L
Sbjct: 70 YFCDINQRDSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPEHLSISRLKH 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI+ +I+E++ A+ +T+EG TA ++ +L D++I+RLA+G+PMGS LDY+D GT+
Sbjct: 130 RIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSSLDYVDGGTLA 189
Query: 193 EAIRSRT 199
A+ R+
Sbjct: 190 RALAGRS 196
>gi|229890155|sp|A4G3Z0|RECR_HERAR RecName: Full=Recombination protein recR
gi|193222271|emb|CAL61227.2| Recombination protein RecR [Herminiimonas arsenicoxydans]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 112/186 (60%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + L R+PG GP+SA+R HL++ L A++ +V C++C + C
Sbjct: 10 LTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNTFTESAVC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C+D +R+A+++ VVE D +E++ LY VL G LSPLD IGP+DI ++ LI
Sbjct: 70 ETCLDAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDIHLEKLIS 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y+D GTI
Sbjct: 130 RATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIA 189
Query: 193 EAIRSR 198
A+ R
Sbjct: 190 RAMLDR 195
>gi|302380904|ref|ZP_07269366.1| recombination protein RecR [Finegoldia magna ACS-171-V-Col3]
gi|302311282|gb|EFK93301.1| recombination protein RecR [Finegoldia magna ACS-171-V-Col3]
Length = 202
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++ LIK L+ +P G +SARR ++ + + L E++ N+ + + C CGN+
Sbjct: 6 KAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKDNIRPCPNCGNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC DQ+RD S+I VVED ++ ++E++ N YHVLGG LSP D I P+D+ +
Sbjct: 66 DKKLCDICSDQKRDNSIITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQDLNL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185
++L R + ++E+I A+S T G T ++I++ LK +VK++R+A G+P+G+ L+Y
Sbjct: 126 ENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGANLEY 185
Query: 186 LDDGTIFEAIRSR 198
D+ ++++AI R
Sbjct: 186 YDEMSLYKAILDR 198
>gi|303232546|ref|ZP_07319232.1| recombination protein RecR [Atopobium vaginae PB189-T1-4]
gi|302481333|gb|EFL44407.1| recombination protein RecR [Atopobium vaginae PB189-T1-4]
Length = 199
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 110/182 (60%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
++PG GP+SA R L+++ Q LA+A+ + ++V C +C T D C C
Sbjct: 15 FGKLPGIGPKSAARIAYFLMEQPTQDATRLAQAIIRLKDEVHFCPVCFTYATDDLCTYCS 74
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D RD + I VV + D+ A+E + A + LYHVLGG +SP+D IGPE++ + L R+
Sbjct: 75 DSSRDTTTICVVAEPKDVAAIENTHAYHGLYHVLGGVISPMDNIGPEELHVAELTRRLAN 134
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+ + E+I A S +EG+TTA Y+ LK + V TRLA G+P+G +L+Y D+ T+ AI
Sbjct: 135 QTVHEVILATSPNVEGETTAIYLARLLKPLGVTTTRLASGLPVGGDLEYADEVTLGRAIE 194
Query: 197 SR 198
+R
Sbjct: 195 AR 196
>gi|82702977|ref|YP_412543.1| recombination protein RecR [Nitrosospira multiformis ATCC 25196]
gi|123544262|sp|Q2Y7X0|RECR_NITMU RecName: Full=Recombination protein recR
gi|82411042|gb|ABB75151.1| recombination protein RecR [Nitrosospira multiformis ATCC 25196]
Length = 199
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 117/191 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI L +PG GPRSA+R HL+++ ++ LA+++ V C C N
Sbjct: 5 RSLDELINALRCLPGVGPRSAQRMAYHLLQRDQEGARRLADSLDYALEHVRHCEKCNNFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C +C Q+RD +++ VVE ADL +E++ +Y VL G LSPLD IGP +I +
Sbjct: 65 EEVVCELCSSQRRDPALLCVVEMPADLLMMEQAHCYKGMYFVLMGRLSPLDGIGPREINL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R ++E+I A + T+EG+ TAHYI + L+ +KITR+A G+P+G EL+++D
Sbjct: 125 DRLLKRARDNMVKEVILATNFTVEGEATAHYIGEMLQNEGLKITRIARGLPVGGELEHVD 184
Query: 188 DGTIFEAIRSR 198
GT+ +A+ R
Sbjct: 185 SGTLAQAVLER 195
>gi|15610851|ref|NP_218232.1| recombination protein RecR [Mycobacterium tuberculosis H37Rv]
gi|15843336|ref|NP_338373.1| recombination protein RecR [Mycobacterium tuberculosis CDC1551]
gi|31794887|ref|NP_857380.1| recombination protein RecR [Mycobacterium bovis AF2122/97]
gi|121639631|ref|YP_979855.1| recombination protein RecR [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663580|ref|YP_001285103.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
gi|148824920|ref|YP_001289674.1| recombination protein RecR [Mycobacterium tuberculosis F11]
gi|167970870|ref|ZP_02553147.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
gi|215405767|ref|ZP_03417948.1| recombination protein RecR [Mycobacterium tuberculosis 02_1987]
gi|215413642|ref|ZP_03422310.1| recombination protein RecR [Mycobacterium tuberculosis 94_M4241A]
gi|215424958|ref|ZP_03422877.1| recombination protein RecR [Mycobacterium tuberculosis T92]
gi|218755499|ref|ZP_03534295.1| recombination protein RecR [Mycobacterium tuberculosis GM 1503]
gi|219559798|ref|ZP_03538874.1| recombination protein RecR [Mycobacterium tuberculosis T17]
gi|224992127|ref|YP_002646816.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800761|ref|YP_003033762.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435]
gi|254233210|ref|ZP_04926536.1| recombination protein recR [Mycobacterium tuberculosis C]
gi|254366260|ref|ZP_04982304.1| recombination protein recR [Mycobacterium tuberculosis str.
Haarlem]
gi|254552825|ref|ZP_05143272.1| recombination protein RecR [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184636|ref|ZP_05762110.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
gi|260198760|ref|ZP_05766251.1| recombination protein RecR [Mycobacterium tuberculosis T46]
gi|260202916|ref|ZP_05770407.1| recombination protein RecR [Mycobacterium tuberculosis K85]
gi|289441151|ref|ZP_06430895.1| recombination protein RecR [Mycobacterium tuberculosis T46]
gi|289445314|ref|ZP_06435058.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
gi|289555980|ref|ZP_06445190.1| recombination protein recR [Mycobacterium tuberculosis KZN 605]
gi|289571959|ref|ZP_06452186.1| recombination protein recR [Mycobacterium tuberculosis T17]
gi|289572366|ref|ZP_06452593.1| recombination protein recR [Mycobacterium tuberculosis K85]
gi|289747554|ref|ZP_06506932.1| recombination protein recr [Mycobacterium tuberculosis 02_1987]
gi|289748233|ref|ZP_06507611.1| recombination protein recR [Mycobacterium tuberculosis T92]
gi|289763896|ref|ZP_06523274.1| recombination protein recR [Mycobacterium tuberculosis GM 1503]
gi|297636393|ref|ZP_06954173.1| recombination protein RecR [Mycobacterium tuberculosis KZN 4207]
gi|297733387|ref|ZP_06962505.1| recombination protein RecR [Mycobacterium tuberculosis KZN R506]
gi|298527192|ref|ZP_07014601.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A]
gi|306778072|ref|ZP_07416409.1| recombination protein recR [Mycobacterium tuberculosis SUMu001]
gi|306778604|ref|ZP_07416941.1| recombination protein recR [Mycobacterium tuberculosis SUMu002]
gi|306786627|ref|ZP_07424949.1| recombination protein recR [Mycobacterium tuberculosis SUMu003]
gi|306790993|ref|ZP_07429315.1| recombination protein recR [Mycobacterium tuberculosis SUMu004]
gi|306791312|ref|ZP_07429614.1| recombination protein recR [Mycobacterium tuberculosis SUMu005]
gi|306795377|ref|ZP_07433679.1| recombination protein recR [Mycobacterium tuberculosis SUMu006]
gi|306801348|ref|ZP_07438016.1| recombination protein recR [Mycobacterium tuberculosis SUMu008]
gi|306805559|ref|ZP_07442227.1| recombination protein recR [Mycobacterium tuberculosis SUMu007]
gi|306969956|ref|ZP_07482617.1| recombination protein recR [Mycobacterium tuberculosis SUMu009]
gi|306974189|ref|ZP_07486850.1| recombination protein recR [Mycobacterium tuberculosis SUMu010]
gi|307081897|ref|ZP_07491067.1| recombination protein recR [Mycobacterium tuberculosis SUMu011]
gi|307086510|ref|ZP_07495623.1| recombination protein recR [Mycobacterium tuberculosis SUMu012]
gi|313660718|ref|ZP_07817598.1| recombination protein RecR [Mycobacterium tuberculosis KZN V2475]
gi|54039039|sp|P65991|RECR_MYCBO RecName: Full=Recombination protein recR
gi|54041798|sp|P65990|RECR_MYCTU RecName: Full=Recombination protein recR
gi|171704440|sp|A1KQ47|RECR_MYCBP RecName: Full=Recombination protein recR
gi|172047917|sp|A5U941|RECR_MYCTA RecName: Full=Recombination protein recR
gi|2960139|emb|CAA18037.1| PROBABLE RECOMBINATION PROTEIN RECR [Mycobacterium tuberculosis
H37Rv]
gi|13883698|gb|AAK48187.1| recR protein [Mycobacterium tuberculosis CDC1551]
gi|31620485|emb|CAD95928.1| RECOMBINATION PROTEIN RECR [Mycobacterium bovis AF2122/97]
gi|121495279|emb|CAL73765.1| Recombination protein recR [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124603003|gb|EAY61278.1| recombination protein recR [Mycobacterium tuberculosis C]
gi|134151772|gb|EBA43817.1| recombination protein recR [Mycobacterium tuberculosis str.
Haarlem]
gi|148507732|gb|ABQ75541.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
gi|148723447|gb|ABR08072.1| recombination protein recR [Mycobacterium tuberculosis F11]
gi|224775242|dbj|BAH28048.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322264|gb|ACT26867.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435]
gi|289414070|gb|EFD11310.1| recombination protein RecR [Mycobacterium tuberculosis T46]
gi|289418272|gb|EFD15473.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
gi|289440612|gb|EFD23105.1| recombination protein recR [Mycobacterium tuberculosis KZN 605]
gi|289536797|gb|EFD41375.1| recombination protein recR [Mycobacterium tuberculosis K85]
gi|289545713|gb|EFD49361.1| recombination protein recR [Mycobacterium tuberculosis T17]
gi|289688082|gb|EFD55570.1| recombination protein recr [Mycobacterium tuberculosis 02_1987]
gi|289688820|gb|EFD56249.1| recombination protein recR [Mycobacterium tuberculosis T92]
gi|289711402|gb|EFD75418.1| recombination protein recR [Mycobacterium tuberculosis GM 1503]
gi|298496986|gb|EFI32280.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A]
gi|308213601|gb|EFO73000.1| recombination protein recR [Mycobacterium tuberculosis SUMu001]
gi|308328334|gb|EFP17185.1| recombination protein recR [Mycobacterium tuberculosis SUMu002]
gi|308328738|gb|EFP17589.1| recombination protein recR [Mycobacterium tuberculosis SUMu003]
gi|308332580|gb|EFP21431.1| recombination protein recR [Mycobacterium tuberculosis SUMu004]
gi|308340071|gb|EFP28922.1| recombination protein recR [Mycobacterium tuberculosis SUMu005]
gi|308344061|gb|EFP32912.1| recombination protein recR [Mycobacterium tuberculosis SUMu006]
gi|308347859|gb|EFP36710.1| recombination protein recR [Mycobacterium tuberculosis SUMu007]
gi|308351847|gb|EFP40698.1| recombination protein recR [Mycobacterium tuberculosis SUMu008]
gi|308352512|gb|EFP41363.1| recombination protein recR [Mycobacterium tuberculosis SUMu009]
gi|308356462|gb|EFP45313.1| recombination protein recR [Mycobacterium tuberculosis SUMu010]
gi|308360409|gb|EFP49260.1| recombination protein recR [Mycobacterium tuberculosis SUMu011]
gi|308364105|gb|EFP52956.1| recombination protein recR [Mycobacterium tuberculosis SUMu012]
gi|323717579|gb|EGB26781.1| recombination protein recR [Mycobacterium tuberculosis CDC1551A]
gi|328460489|gb|AEB05912.1| recombination protein recR [Mycobacterium tuberculosis KZN 4207]
Length = 203
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCGNVSDN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 ERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ + E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R VL
Sbjct: 186 FADELTLGRALAGRRVL 202
>gi|329944061|ref|ZP_08292327.1| recombination protein RecR [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531107|gb|EGF57958.1| recombination protein RecR [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 202
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +PG GP+SA+R H++ + L EA+ + KV C CGN+
Sbjct: 9 VQDLIDEFGELPGIGPKSAQRMAFHVLAADSAAVERLIEALRAVKAKVRFCETCGNIAEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D+ ++
Sbjct: 69 PQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDDLRVRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G++L+Y D+
Sbjct: 129 LFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVGADLEYADEV 188
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 189 TLGRAFEGR 197
>gi|260102439|ref|ZP_05752676.1| recombination protein R [Lactobacillus helveticus DSM 20075]
gi|260083759|gb|EEW67879.1| recombination protein R [Lactobacillus helveticus DSM 20075]
Length = 199
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI R+PG G ++A R + + E+ + ++A+ + N + C ICGN+
Sbjct: 7 IAHLIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE I I+S
Sbjct: 67 EVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEKINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ ++E+I A+++T EG++TA YI +K ++K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAEIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTAL 199
>gi|256545278|ref|ZP_05472643.1| recombination protein RecR [Anaerococcus vaginalis ATCC 51170]
gi|256399105|gb|EEU12717.1| recombination protein RecR [Anaerococcus vaginalis ATCC 51170]
Length = 199
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 120/189 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ ++P G +SA R + +V + + + ++++ + +K+ C ICGN+
Sbjct: 8 LNKLIEQFQKLPTIGKKSAERLAMSIVGRDLESVEEFSKSLLEVKSKIHPCKICGNLTED 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R+ + I V+EDV +L+A+E+S + YH+LGG +SP D + ED+ I
Sbjct: 68 EICGICKDISREENTICVIEDVRNLYAIEKSSVYHGKYHILGGLISPSDNVKAEDLSIDK 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++RI+ + I E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS L+Y D
Sbjct: 128 LLDRIDKENINEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSNLEYFDQL 187
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 188 TLERALEDR 196
>gi|313673334|ref|YP_004051445.1| DNA replication and repair protein recr [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940090|gb|ADR19282.1| DNA replication and repair protein RecR [Calditerrivibrio
nitroreducens DSM 19672]
Length = 200
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 121/195 (62%), Gaps = 1/195 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I K + IK L+++PG G ++A R ++ L+K ++ + +A A+ ++ C CG
Sbjct: 2 IYSKSFDRCIKELSKLPGIGKKTALRLSMQLLKMNQKDVEDIANAIIDLKKNTKFCIRCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC D RD +I VVE+ D++ +E S N +YHVLGG L+PLD I P+D
Sbjct: 62 AMAEGEVCPICTDNNRDKQIICVVEEAKDVFLIEVSGKYNGVYHVLGGRLAPLDGINPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSEL 183
+ I+ L+ERI +++E+I A + +EG TTA ++ + K D+K+TR+A G+P+G L
Sbjct: 122 LRIKELLERIREDQVKEVILATNPDVEGDTTAIFLKKLISKNFDIKVTRIATGVPIGGYL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ TI +++ +R
Sbjct: 182 EYTDEITILKSLENR 196
>gi|150008070|ref|YP_001302813.1| recombination protein RecR [Parabacteroides distasonis ATCC 8503]
gi|262381356|ref|ZP_06074494.1| recombination protein RecR [Bacteroides sp. 2_1_33B]
gi|298376576|ref|ZP_06986531.1| recombination protein RecR [Bacteroides sp. 3_1_19]
gi|301309833|ref|ZP_07215772.1| recombination protein RecR [Bacteroides sp. 20_3]
gi|166221950|sp|A6LBX7|RECR_PARD8 RecName: Full=Recombination protein recR
gi|149936494|gb|ABR43191.1| recombination protein RecR [Parabacteroides distasonis ATCC 8503]
gi|262296533|gb|EEY84463.1| recombination protein RecR [Bacteroides sp. 2_1_33B]
gi|298266454|gb|EFI08112.1| recombination protein RecR [Bacteroides sp. 3_1_19]
gi|300831407|gb|EFK62038.1| recombination protein RecR [Bacteroides sp. 20_3]
Length = 208
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 122/199 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C
Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G
Sbjct: 121 GPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIINRT 199
>gi|227496712|ref|ZP_03926987.1| recombination protein RecR [Actinomyces urogenitalis DSM 15434]
gi|226833777|gb|EEH66160.1| recombination protein RecR [Actinomyces urogenitalis DSM 15434]
Length = 201
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI ++PG GP+SA+R H++ + L EA+ + +V C CGN+ +
Sbjct: 9 VQDLIDEFGQLPGIGPKSAQRLAFHVLSADSSSVERLIEALRAVKARVRFCETCGNIAES 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D+ ++
Sbjct: 69 EQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDDLRVRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + G+ TA Y+ L+ ++V ++RLA G+P+GS+L+Y D+
Sbjct: 129 LLARLG-GDVEEVILATDPDVVGEATAAYLTRMLRTMEVPVSRLASGLPVGSDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 188 TLGRAFEGR 196
>gi|253996276|ref|YP_003048340.1| recombination protein RecR [Methylotenera mobilis JLW8]
gi|253982955|gb|ACT47813.1| recombination protein RecR [Methylotenera mobilis JLW8]
Length = 200
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L +PG GP+SA+R +L+++ Q LA A+ N V C +C
Sbjct: 7 LEQLIDSLRCLPGVGPKSAQRMAYYLLQRDRQGANGLALALNNALQVVDHCKLCNTFSEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C QRD +V+ VVE DL LE ++A + +Y VL G LSPLD IGP++I +
Sbjct: 67 PICPLCESAQRDKTVLCVVEMPTDLIMLENTRAYSGMYFVLMGRLSPLDGIGPKEIHLDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R + E+I A + T+EG TAHYI + L+ +K++R+A G+PMG E++Y+D G
Sbjct: 127 LIKRANDGVVTEVILATNYTVEGDATAHYISELLRARGIKVSRIARGMPMGGEIEYVDTG 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAQAMLER 195
>gi|296111511|ref|YP_003621893.1| recombination protein RecR [Leuconostoc kimchii IMSNU 11154]
gi|295833043|gb|ADG40924.1| recombination protein RecR [Leuconostoc kimchii IMSNU 11154]
Length = 201
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV--D 67
I LI ++PG G ++A R + + E + ++++ + N + CSICGN+ +
Sbjct: 7 IAKLIDSYTKLPGIGSKTATRLAFYTLGMNEDDVVDFSKSLLSAKNDLTFCSICGNITEN 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ +PC IC D RD S + VVE+ D+ A+E ++ + LYHVL G +SPL GPEDI +
Sbjct: 67 SMNPCVICQDTSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPLAGTGPEDINL 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ + ++I E+I + EG+ TA Y+ LK +K+TRLA+G+ +GS++DY
Sbjct: 127 PSLIRRLSQHQEIDEVIVGTNVNAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIDYA 186
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A++ RT L
Sbjct: 187 DQLTLIKAVQGRTEL 201
>gi|260589050|ref|ZP_05854963.1| recombination protein RecR [Blautia hansenii DSM 20583]
gi|331083244|ref|ZP_08332357.1| recombination protein recR [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540829|gb|EEX21398.1| recombination protein RecR [Blautia hansenii DSM 20583]
gi|330404325|gb|EGG83870.1| recombination protein recR [Lachnospiraceae bacterium 6_1_63FAA]
Length = 199
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ +R+PG G +SA+R H++ ++ + LA A+ N V C C +
Sbjct: 7 HINKLIEEFSRLPGIGAKSAQRLAFHVLNMPKEQVEQLAGAITNAKANVQYCKCCYTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R+ VI+VVE+ DL A E++ + +YHVL G++SP+ IGP+DI ++
Sbjct: 67 QEICPICKNPKRNHQVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPDDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++RI I E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRISQNDIEEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLLRALEGRVEL 199
>gi|227549653|ref|ZP_03979702.1| recombination protein RecR [Corynebacterium lipophiloflavum DSM
44291]
gi|227078277|gb|EEI16240.1| recombination protein RecR [Corynebacterium lipophiloflavum DSM
44291]
Length = 208
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R +L+K+ + L A+ + + V C IC NV
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFYLLKQDPDDVDRLVGALNAVRDGVAFCRICSNVSRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RDA ++ VVED D+ +ER+ YHVLGG+L PL +GP+D+ I S
Sbjct: 66 EVCRICADSSRDAGLVCVVEDAKDIQVIERTGEFRGRYHVLGGALDPLANVGPKDLSIAS 125
Query: 130 LIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIP 178
L++RI E + E+I A EG+ TA Y+ LK D+ ++RLA G+P
Sbjct: 126 LLQRIGAVLPDVDDAEAPNVHEVIIATDPDTEGEATASYLARLLKDFPDLVVSRLASGMP 185
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G +L+++D+ T+ A+ R L
Sbjct: 186 LGGDLEFVDELTLSRALTGRLTL 208
>gi|150025368|ref|YP_001296194.1| recombination protein RecR [Flavobacterium psychrophilum JIP02/86]
gi|172048609|sp|A6GZ60|RECR_FLAPJ RecName: Full=Recombination protein recR
gi|149771909|emb|CAL43383.1| Recombination protein RecR [Flavobacterium psychrophilum JIP02/86]
Length = 206
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 120/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +E + +A++PG G R+A R L+L+K+ + LA+++ + + C C
Sbjct: 2 EFSSKLLEKAVNEMAQLPGIGKRTALRLVLYLLKQPKDRTDFLAQSLLTMREGIIFCENC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC ++ R+ ++ VVEDV D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 HNISDVAVCEICSNKNRNHQIVCVVEDVRDVMAIENTGQFRGVYHVLGGKISPIDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I SL+E+++ + E+IFA+S+T+EG TT YI ++K ++ + +A GI +G EL
Sbjct: 122 QLNISSLVEKVKSGSVSEIIFALSSTMEGDTTNFYIYKQIKDCEIITSSIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSILNR 196
>gi|167752635|ref|ZP_02424762.1| hypothetical protein ALIPUT_00890 [Alistipes putredinis DSM 17216]
gi|167659704|gb|EDS03834.1| hypothetical protein ALIPUT_00890 [Alistipes putredinis DSM 17216]
Length = 198
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 115/183 (62%), Gaps = 1/183 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
L+++PG G R+A R +HL++ + + + ++ + C +C N+ + C IC
Sbjct: 12 LSKLPGIGRRTALRLAIHLLRMEPDSVSDMTRSIDRFRRDIKYCKLCNNLSDEEICPICA 71
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D++RD + + VVE VAD+ ++E ++ LYHVLGG +SP+ I P D+ I LIERI
Sbjct: 72 DRERDHTTVCVVEQVADVLSIENTRQYRGLYHVLGGVISPMQGIAPSDLKIDLLIERIAQ 131
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTIFEAI 195
IRE+I AIS ++EG+TT Y++++L+ VK+T +A GI G EL+Y+D+ TI A+
Sbjct: 132 GTIREVILAISTSVEGETTLFYLLNRLRQYPQVKVTSIARGIGFGDELEYVDELTITHAL 191
Query: 196 RSR 198
+R
Sbjct: 192 MNR 194
>gi|257458483|ref|ZP_05623620.1| recombination protein RecR [Treponema vincentii ATCC 35580]
gi|257444080|gb|EEV19186.1| recombination protein RecR [Treponema vincentii ATCC 35580]
Length = 196
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI L R+PG G +S R H++K++ LA+++ N+++ + C ICG
Sbjct: 4 LEDLIDNLCRLPGIGKKSGARLAYHILKQEPLYAHRLADSLYNLHDSIKPCPICGAFTDQ 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RD S I VVE D++ L L+HVLGG ++PL+ IGPE + I S
Sbjct: 64 DVCTICSDPGRDGSCICVVEQPQDVYTLMSMGEYRGLFHVLGGVIAPLEGIGPEQLRIAS 123
Query: 130 LIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++RI ++E+I A + TIEG TTA YI L+ V++TRLA G+P+G +L+Y D
Sbjct: 124 LVKRIGSGTAVKEVILATNPTIEGDTTALYIQKILRDFPVEVTRLASGLPVGGDLEYTDK 183
Query: 189 GTIFEAIRSR 198
T+ + + R
Sbjct: 184 LTLMRSFKGR 193
>gi|33863348|ref|NP_894908.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9313]
gi|73621507|sp|Q7V6R9|RECR_PROMM RecName: Full=Recombination protein recR
gi|33640797|emb|CAE21252.1| RecR protein [Prochlorococcus marinus str. MIT 9313]
Length = 189
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I R+PG GPR+A+R LHL+++ E + A+A+ ++V C C ++ C
Sbjct: 1 MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +R ++ VV D DL ALER++ YHVLGG +SP+D IGP+ + I SLI+
Sbjct: 61 DICRDGKRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQ 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D+ T+
Sbjct: 121 RVDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYADEVTLT 179
Query: 193 EAIRSRTVL 201
A+ R +
Sbjct: 180 RALEGRRAM 188
>gi|325066587|ref|ZP_08125260.1| recombination protein RecR [Actinomyces oris K20]
gi|326772634|ref|ZP_08231918.1| recombination protein RecR [Actinomyces viscosus C505]
gi|326637266|gb|EGE38168.1| recombination protein RecR [Actinomyces viscosus C505]
Length = 202
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +PG GP+SA+R H++ + L EA+ + KV C CGN+
Sbjct: 9 VQDLIDEFGELPGIGPKSAQRMAFHVLAADAAAVERLIEALRAVKAKVRFCETCGNIAEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D+ ++
Sbjct: 69 PQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDDLRVRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G++L+Y D+
Sbjct: 129 LFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVGADLEYADEV 188
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 189 TLGRAFEGR 197
>gi|260889568|ref|ZP_05900831.1| recombination protein RecR [Leptotrichia hofstadii F0254]
gi|260860979|gb|EEX75479.1| recombination protein RecR [Leptotrichia hofstadii F0254]
Length = 198
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K++++LI + A++PG G +SA R ++ + E + + E + + + + C ICGN+
Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLDRSEADIDRMLEIIKDSHANIKHCEICGNLS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC +++RD VI VVE V D+ A E+S+ N LYHVLGG + PL+ + ED+ +
Sbjct: 62 ENDICEICANEKRDKEVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNL 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + ++E+I A++ +EG+TT+ Y+ LK +VKI+++A GIPMG ++Y D
Sbjct: 122 RKLMNRLN-EDVKEVILALNPDLEGETTSLYLTKFLKEKNVKISKIASGIPMGGNIEYTD 180
Query: 188 DGTIFEAIRSR 198
T+ ++ R
Sbjct: 181 MATLGRSLEGR 191
>gi|326560440|gb|EGE10822.1| recombination protein RecR [Moraxella catarrhalis 7169]
gi|326561644|gb|EGE11981.1| recombination protein RecR [Moraxella catarrhalis 103P14B1]
gi|326562607|gb|EGE12918.1| recombination protein RecR [Moraxella catarrhalis 46P47B1]
gi|326563583|gb|EGE13837.1| recombination protein RecR [Moraxella catarrhalis 12P80B1]
gi|326565825|gb|EGE15987.1| recombination protein RecR [Moraxella catarrhalis BC1]
gi|326570480|gb|EGE20520.1| recombination protein RecR [Moraxella catarrhalis BC8]
gi|326571164|gb|EGE21188.1| recombination protein RecR [Moraxella catarrhalis BC7]
gi|326573454|gb|EGE23422.1| recombination protein RecR [Moraxella catarrhalis 101P30B1]
gi|326575648|gb|EGE25571.1| recombination protein RecR [Moraxella catarrhalis CO72]
gi|326577112|gb|EGE27006.1| recombination protein RecR [Moraxella catarrhalis O35E]
Length = 198
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+++ LIK L +P G +SA+R L L+ KK LA A+ + + C C +
Sbjct: 5 KLDKLIKELQVLPSVGQKSAQRMALQLLTKKRTQGLSLAAALETAMHDIKECLQCHSFSD 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC+D +RD ++ VVE+ +D+ A+E+S A Y VLGG LSP+D I D+ I
Sbjct: 65 DEICPICLDHRRDDGLLCVVENASDVMAIEQSGAYRGKYFVLGGHLSPIDGINANDLHID 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI RI + I E+I A AT+EGQTTA +I D + KITRLA GIPMG EL Y+D
Sbjct: 125 QLIHRIRHEAIHEVILATGATVEGQTTAFFIHDAICTHVPKITRLAQGIPMGGELGYVDS 184
Query: 189 GTIFEAIRSRT 199
T+ +A+++R+
Sbjct: 185 ITLHQALQNRS 195
>gi|89892859|ref|YP_516346.1| hypothetical protein DSY0113 [Desulfitobacterium hafniense Y51]
gi|122484179|sp|Q251Z0|RECR_DESHY RecName: Full=Recombination protein recR
gi|89332307|dbj|BAE81902.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 198
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 123/189 (65%), Gaps = 3/189 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI L+R+PG GP++A R +L+++ Q+ LAE M ++ CS+C N
Sbjct: 10 LADLITGLSRLPGIGPKTAGRLAFYLLQQP-QVAENLAETMIRAQREIRQCSLCCNYTDH 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC ++R+ +++ +VE D+ +LE+++ LYHVL G +SPL+ +GPE + I
Sbjct: 69 DPCPICTGEKRERTLLCIVEQPRDVVSLEKTREFKGLYHVLHGVISPLEGVGPEQLTISK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E ++E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G +L+Y D+
Sbjct: 129 LLGRLE--GVQEVVMAMNPTVEGEATALYLSRLLKPLGIKVTRIAHGLPVGGDLEYADEI 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARALEGR 195
>gi|20806579|ref|NP_621750.1| recombinational DNA repair protein [Thermoanaerobacter
tengcongensis MB4]
gi|24212232|sp|Q8RDI4|RECR_THETN RecName: Full=Recombination protein recR
gi|20515021|gb|AAM23354.1| Recombinational DNA repair protein [Thermoanaerobacter
tengcongensis MB4]
Length = 199
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L+++PG GP++A+R ++ + L++A+ K+ C IC N+
Sbjct: 8 VAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D+ RD S I VV D+ A+E+ K +YHVL G +SP++ +GPEDI I+
Sbjct: 68 EVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ ++E+I A + IEG+ TA YI LK VK+TR+A+GIP+G +L+Y D
Sbjct: 128 LLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLSKALEGR 196
>gi|194364637|ref|YP_002027247.1| recombination protein RecR [Stenotrophomonas maltophilia R551-3]
gi|194347441|gb|ACF50564.1| recombination protein RecR [Stenotrophomonas maltophilia R551-3]
Length = 199
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 116/190 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L +PG G ++A+R HL++++ + LAEA++ ++ C+ C + T
Sbjct: 6 LEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAEALSLAVERIGHCAQCRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP ++G++
Sbjct: 66 ELCPTCANSSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRELGLEQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 126 LERRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELEYVDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 186 TLSHAFGTRS 195
>gi|146296606|ref|YP_001180377.1| recombination protein RecR [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|172046023|sp|A4XJV1|RECR_CALS8 RecName: Full=Recombination protein recR
gi|145410182|gb|ABP67186.1| DNA replication and repair protein RecR [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 199
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L ++PG G ++A+R +++ K + + LAEA+ + N LC IC N
Sbjct: 8 ISKLIQQLEKLPGIGQKTAQRLAFYIINMKNEDVKALAEAILSAKNSTKLCKICCNFTEG 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RD S+I VVE+ D+ ALE+ K LYHVL G++SPL PE + I
Sbjct: 68 DICHICSDDKRDRSIICVVEEPQDVVALEKVKEYKGLYHVLHGAISPLKGKYPEQLTIDV 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G +++Y D+
Sbjct: 128 LLKRLADTNVKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVGGDIEYADEV 187
Query: 190 TIFEAIRSR 198
TI +AI R
Sbjct: 188 TILKAIEGR 196
>gi|329117044|ref|ZP_08245761.1| recombination protein RecR [Streptococcus parauberis NCFD 2020]
gi|326907449|gb|EGE54363.1| recombination protein RecR [Streptococcus parauberis NCFD 2020]
Length = 198
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ + A+ + ++ CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICGNLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R+ +I+VVE+ D+ A+E+ + + LYHVL G +SP++ +GP++I ++
Sbjct: 67 DPCGICTDPNRNQEIILVVEESKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDNINLKP 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+
Sbjct: 127 LITRLMDGKVNEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|227877634|ref|ZP_03995687.1| recombination protein RecR [Lactobacillus crispatus JV-V01]
gi|256844524|ref|ZP_05550010.1| recombination protein RecR [Lactobacillus crispatus 125-2-CHN]
gi|256849087|ref|ZP_05554520.1| recombinational DNA repair protein [Lactobacillus crispatus
MV-1A-US]
gi|262047569|ref|ZP_06020524.1| recombination protein RecR [Lactobacillus crispatus MV-3A-US]
gi|293379954|ref|ZP_06626055.1| recombination protein RecR [Lactobacillus crispatus 214-1]
gi|312977920|ref|ZP_07789666.1| recombination protein RecR [Lactobacillus crispatus CTV-05]
gi|227862782|gb|EEJ70248.1| recombination protein RecR [Lactobacillus crispatus JV-V01]
gi|256613602|gb|EEU18805.1| recombination protein RecR [Lactobacillus crispatus 125-2-CHN]
gi|256713863|gb|EEU28851.1| recombinational DNA repair protein [Lactobacillus crispatus
MV-1A-US]
gi|260572145|gb|EEX28710.1| recombination protein RecR [Lactobacillus crispatus MV-3A-US]
gi|290923467|gb|EFE00369.1| recombination protein RecR [Lactobacillus crispatus 214-1]
gi|310895227|gb|EFQ44295.1| recombination protein RecR [Lactobacillus crispatus CTV-05]
Length = 199
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI ++PG G ++A R + + +Q + A+++ + + C ICGN+
Sbjct: 7 IAHLIDAYMKLPGIGEKTATRLAFYTMDMPDQDVDDFAKSLVQVKKDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I I+S
Sbjct: 67 DVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEINIKS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKNDAVKEVILALNSTPEGESTAMYISKLIKSAGIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTAL 199
>gi|222529136|ref|YP_002573018.1| recombination protein RecR [Caldicellulosiruptor bescii DSM 6725]
gi|222455983|gb|ACM60245.1| recombination protein RecR [Caldicellulosiruptor bescii DSM 6725]
Length = 201
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 2/198 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+K I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC
Sbjct: 3 MQQKENA--ISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 61 RVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G
Sbjct: 121 YPEQLTIDVLLKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
+++Y D+ TI +AI R
Sbjct: 181 GDIEYADEVTILKAIEGR 198
>gi|226325910|ref|ZP_03801428.1| hypothetical protein COPCOM_03723 [Coprococcus comes ATCC 27758]
gi|225205452|gb|EEG87806.1| hypothetical protein COPCOM_03723 [Coprococcus comes ATCC 27758]
Length = 198
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+R+PG G +SA R H++ ++ + LA + + N V C C +
Sbjct: 7 QISKLIEELSRLPGIGAKSAGRLAFHIINMPKEQVEQLAATLVDARNNVRYCKQCCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC ++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP DI ++
Sbjct: 67 KELCPICASEERDHKTIMVVENSRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMERLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTAL 198
>gi|206890014|ref|YP_002248896.1| recombination protein RecR [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741952|gb|ACI21009.1| recombination protein RecR [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 197
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L ++PG G ++A+R ++ E +AEA+ N+ K CS+C N+
Sbjct: 5 LENLIENLCKLPGIGRKTAQRLAFFIMNMPENEALEIAEAIINLKKKAKFCSVCFNITEN 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD S+I VVE+ +++ E++ +YHVLGG++SP+D + P+ + I+
Sbjct: 65 EKCNICSNSIRDHSIICVVEEPSNIILFEKT-GYKGVYHVLGGNISPVDGLTPDKLKIKE 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER++ +IRE+I + S +G+ TA +I D LK +VKI+R+AYG+P+G ++++ D+
Sbjct: 124 LEERVKTGQIREVIISTSPNTKGELTAQWIADLLKKYNVKISRIAYGLPIGIDIEFADEV 183
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 184 TLSKALEGR 192
>gi|317488825|ref|ZP_07947357.1| recombination protein RecR [Eggerthella sp. 1_3_56FAA]
gi|316912079|gb|EFV33656.1| recombination protein RecR [Eggerthella sp. 1_3_56FAA]
Length = 198
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L R+PG GP+SA+R ++ + L+EA+A + V CS C N
Sbjct: 7 IQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSEAIAEVKETVRFCSRCFNYAED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP+++ I
Sbjct: 67 DLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDELRIAQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L++ D+
Sbjct: 127 LMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLEFADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +R L
Sbjct: 187 TLGRAIEARRPL 198
>gi|300780023|ref|ZP_07089879.1| recombination protein R [Corynebacterium genitalium ATCC 33030]
gi|300534133|gb|EFK55192.1| recombination protein R [Corynebacterium genitalium ATCC 33030]
Length = 211
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 14/206 (6%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R HL+K + + L A+ + + V C IC NV
Sbjct: 6 LQDLIDEFSRLPGVGPKSAQRIAFHLLKTDPEDIDRLRAALGAVRDGVTFCRICSNVSRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D RDA +I VVED D+ +ER+ YHVLGG+L PL +GP+D+ I S
Sbjct: 66 EVCRVCADSGRDAGLICVVEDAKDIQVIERTGEYTGRYHVLGGALDPLANVGPKDLSISS 125
Query: 130 LIERI-------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAY 175
L++RI + +I E+I A EG+ TA Y+ LK ++ ++RLA
Sbjct: 126 LLQRIGGVLPDRDPDDADSIPEIHEVILATDPDTEGEATASYLARLLKDFPELTVSRLAS 185
Query: 176 GIPMGSELDYLDDGTIFEAIRSRTVL 201
G+P+G +L+++D+ T+ A+ R L
Sbjct: 186 GMPLGGDLEFVDELTLSRALSGRLTL 211
>gi|319947395|ref|ZP_08021627.1| recombination protein R [Streptococcus australis ATCC 700641]
gi|319746335|gb|EFV98596.1| recombination protein R [Streptococcus australis ATCC 700641]
Length = 198
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 122/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G ++A R + + + + A+ + + ++ CSICGN+
Sbjct: 7 IAKLIESYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELSYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D+ RD S I+VVED D+ A+E + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 EECAICRDETRDPSTILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ +++E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LITRLMDHEVQEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|312622613|ref|YP_004024226.1| recombination protein recr [Caldicellulosiruptor kronotskyensis
2002]
gi|312203080|gb|ADQ46407.1| recombination protein RecR [Caldicellulosiruptor kronotskyensis
2002]
Length = 201
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 2/198 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+K I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC
Sbjct: 3 MQQKENA--ISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 61 RVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G
Sbjct: 121 YPEQLTIDVLMKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
+++Y D+ TI +AI R
Sbjct: 181 GDIEYADEVTILKAIEGR 198
>gi|257790373|ref|YP_003180979.1| recombination protein RecR [Eggerthella lenta DSM 2243]
gi|257474270|gb|ACV54590.1| recombination protein RecR [Eggerthella lenta DSM 2243]
Length = 198
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L R+PG GP+SA+R ++ + L+EA+A + V CS C N
Sbjct: 7 IQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSEAIAEVKETVRFCSRCFNYAED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP+++ I
Sbjct: 67 DLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDELRIAQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L++ D+
Sbjct: 127 LMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLEFADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +R L
Sbjct: 187 TLGRAIEARRPL 198
>gi|332882716|ref|ZP_08450327.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679218|gb|EGJ52204.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 206
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 117/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +EN + + ++P G R+A R LHL+K+ E+ LA+A+ + + C C
Sbjct: 3 FSSKLLENAVYEIGQLPSIGKRTALRLALHLLKQPEEQTLQLAQALVALRTHIVYCKNCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC + RD VI VVED D+ A+E + YHVLGG +SP+D I P +
Sbjct: 63 NISDVEICEICANPVRDTGVICVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAPSN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+E+++ K+ ELI A+S T+EG TT YI +++ ++ I+ +A GI +G+E++
Sbjct: 123 LHIASLVEKVKQGKVNELILALSNTMEGDTTNFYIYKQVEPYNITISTIARGIAVGAEIE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I R
Sbjct: 183 YTDEITLGRSIAHR 196
>gi|227506002|ref|ZP_03936051.1| recombination protein RecR [Corynebacterium striatum ATCC 6940]
gi|227197284|gb|EEI77332.1| recombination protein RecR [Corynebacterium striatum ATCC 6940]
Length = 218
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 121/210 (57%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R H++ + + L A+ + + V C IC N+
Sbjct: 6 LQDLIDEFSRLPGVGPKSAQRIAFHVLHMDPEDVDRLQNALGAVRDGVTFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC++ QRDAS I VVE+ D+ +ER+ N YHVLGG+L PL +GP+D+ I +
Sbjct: 66 EVCRICVNSQRDASTICVVEEPKDIQVIERTGEYNGRYHVLGGALDPLANVGPKDLNISA 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI +I+E+I A EG+ TA Y++ L+ D+
Sbjct: 126 LLQRIGGVLPDRELADSTPDAPLYDTTPEIKEVILATDPNTEGEATAAYLVRLLRDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 186 KITRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|254478345|ref|ZP_05091724.1| recombination protein RecR [Carboxydibrachium pacificum DSM 12653]
gi|214035703|gb|EEB76398.1| recombination protein RecR [Carboxydibrachium pacificum DSM 12653]
Length = 199
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L+++PG GP++A+R ++ + L++A+ K+ C IC N+
Sbjct: 8 VAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNIADK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D+ RD S I VV D+ A+E+ K +YHVL G +SP++ +GPEDI I+
Sbjct: 68 EVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ ++E+I A + IEG+ TA YI LK VK+TR+A+GIP+G +L+Y D
Sbjct: 128 LLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLSKALEGR 196
>gi|315650375|ref|ZP_07903446.1| recombination protein R [Eubacterium saburreum DSM 3986]
gi|315487302|gb|EFU77613.1| recombination protein R [Eubacterium saburreum DSM 3986]
Length = 198
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L+++PG G +SA+R H++ + + L++A+ + V C+ C +
Sbjct: 7 HISKLIEELSKLPGVGAKSAQRLAFHIIGMSSEQVESLSDAIKDAKGNVHYCNECCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC +++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP DI ++
Sbjct: 67 GDICPICANERRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPADIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R+E + E+I A ++T+EG+TTA YI +K ++++R+A G+P+G +L+Y+D+
Sbjct: 127 ELIKRLE-GDVNEVIIATNSTLEGETTAMYIAKLIKPTGIEVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLLRALEGRRTL 198
>gi|283796872|ref|ZP_06346025.1| recombination protein RecR [Clostridium sp. M62/1]
gi|291075278|gb|EFE12642.1| recombination protein RecR [Clostridium sp. M62/1]
gi|295089889|emb|CBK75996.1| recombination protein RecR [Clostridium cf. saccharolyticum K10]
Length = 199
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 122/193 (63%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+++PG G +SA+R H++ + + L+ A+ + V C C +
Sbjct: 7 QITKLIEELSKLPGIGSKSAQRLAFHIINMPAEQVERLSSAITDAKKNVRYCRECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +RD +I+VVE+ DL A E++ +YHVL G++SP+ IGP DI ++
Sbjct: 67 KELCPICESARRDHGIIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ +++RE+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMTRLQKEEVREVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 187 VTLLRALEGRTEL 199
>gi|215448054|ref|ZP_03434806.1| recombination protein RecR [Mycobacterium tuberculosis T85]
gi|289759875|ref|ZP_06519253.1| recombination protein recR [Mycobacterium tuberculosis T85]
gi|294995375|ref|ZP_06801066.1| recombination protein RecR [Mycobacterium tuberculosis 210]
gi|289715439|gb|EFD79451.1| recombination protein recR [Mycobacterium tuberculosis T85]
gi|326905554|gb|EGE52487.1| recombination protein recR [Mycobacterium tuberculosis W-148]
Length = 203
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTCVLAKVRDGVRFCAVCGNVSDN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 ERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ + E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R VL
Sbjct: 186 FADELTLGRALAGRRVL 202
>gi|332526816|ref|ZP_08402917.1| recombination protein RecR [Rubrivivax benzoatilyticus JA2]
gi|332111218|gb|EGJ11250.1| recombination protein RecR [Rubrivivax benzoatilyticus JA2]
Length = 195
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 109/189 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L R+PG G +SA+R HL++ LA A+ +V C+ C
Sbjct: 6 LDALIEALRRLPGVGQKSAQRVAFHLLQHDRDGARRLAHALDVAAERVHHCARCHTFTED 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RD ++ VVE AD ALERS LY VL G LSPLD +G DIG
Sbjct: 66 EVCPVCRDPERDGRLLCVVETPADQHALERSGGYRGLYFVLMGRLSPLDGVGAGDIGAAE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER ++E+I A S T EG+ TAH + L+ +K+TRLA G+P GSE++Y+D G
Sbjct: 126 LIERASDGTVQEVILATSFTAEGEVTAHALAQALRARGLKVTRLARGVPAGSEIEYVDLG 185
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 186 TIAHALVDR 194
>gi|298373110|ref|ZP_06983100.1| recombination protein RecR [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276014|gb|EFI17565.1| recombination protein RecR [Bacteroidetes oral taxon 274 str.
F0058]
Length = 204
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 119/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + +ENL+ R+PG G ++A R LHL+K+ E L ++ +V C +C
Sbjct: 5 KYPSELLENLVNEFHRLPGVGRKTALRYALHLLKEDEADAMNLGNSILRFRAEVSKCRVC 64
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C ICI+ +R+ +I VVE VAD+ A+E + N +YHVLGG +SP++ IGP
Sbjct: 65 NNICDNDLCEICINTKRNHRLICVVESVADVMAVENTAQFNGVYHVLGGVISPMNGIGPA 124
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I +L++R+ I E+I A+S +EG TT YI KL +++I+ +A G+ +G+ L
Sbjct: 125 DLDIPALVQRVAEGGIDEVILALSPDMEGDTTCLYIYKKLADYNIEISTIARGVAVGNSL 184
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 185 EYADEITLGRSIVNR 199
>gi|296113064|ref|YP_003627002.1| recombination protein RecR [Moraxella catarrhalis RH4]
gi|295920758|gb|ADG61109.1| recombination protein RecR [Moraxella catarrhalis RH4]
Length = 198
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+++ LIK L +P G +SA+R L L+ KK LA A+ + + C C +
Sbjct: 5 KLDKLIKELQVLPSVGQKSAQRMALQLLTKKRTQGLSLAAALETAMHDIKECLQCHSFSD 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC+D +RD ++ VVE+ +D+ A+E+S A Y VLGG LSP+D I D+ I
Sbjct: 65 DEICPICLDHRRDDGLLCVVENASDVIAIEQSGAYRGKYFVLGGHLSPIDGINANDLHID 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI RI + I E+I A AT+EGQTTA +I D + KITRLA GIPMG EL Y+D
Sbjct: 125 QLIHRIRHEAIHEVILATGATVEGQTTAFFIHDAICTHVPKITRLAQGIPMGGELGYVDS 184
Query: 189 GTIFEAIRSRT 199
T+ +A+++R+
Sbjct: 185 ITLHQALQNRS 195
>gi|291527023|emb|CBK92609.1| recombination protein RecR [Eubacterium rectale M104/1]
Length = 198
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI LI+ L+++PG G ++A+R H++ ++ L++A+ + V C C +
Sbjct: 7 EISKLIEELSQLPGIGAKTAQRLAFHIINMPKEQAKSLSDAIIDAKEHVRYCKCCYTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D RD I+VVE+ DL A E++ +YHVLGG++SP+ IGP DI ++
Sbjct: 67 DELCPICKDAARDHKTIMVVENTRDLVAYEKTGKYEGVYHVLGGAISPMLGIGPADIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMVRLE-KDVNEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRT 199
T+ A++ RT
Sbjct: 186 VTLLRALQGRT 196
>gi|256852107|ref|ZP_05557494.1| recombination protein RecR [Lactobacillus jensenii 27-2-CHN]
gi|260661323|ref|ZP_05862236.1| recombination protein RecR [Lactobacillus jensenii 115-3-CHN]
gi|282934784|ref|ZP_06340022.1| recombination protein RecR [Lactobacillus jensenii 208-1]
gi|297205018|ref|ZP_06922414.1| recombination protein RecR [Lactobacillus jensenii JV-V16]
gi|256615519|gb|EEU20709.1| recombination protein RecR [Lactobacillus jensenii 27-2-CHN]
gi|260547778|gb|EEX23755.1| recombination protein RecR [Lactobacillus jensenii 115-3-CHN]
gi|281301147|gb|EFA93453.1| recombination protein RecR [Lactobacillus jensenii 208-1]
gi|297149596|gb|EFH29893.1| recombination protein RecR [Lactobacillus jensenii JV-V16]
Length = 199
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + + A+++ ++ + CSICGN+ T
Sbjct: 7 IARLIESYMKLPGIGEKTATRLAFYTLDMPADDVEQFAQSLKDVKTLLHQCSICGNITET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S ++VVE D+ A E + +YHVL G LSP++ IGPEDI I+S
Sbjct: 67 DPCQICRDSNRDRSTVMVVEQPKDVMAFEEMGEYDGMYHVLHGVLSPMEGIGPEDINIKS 126
Query: 130 LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ I+E+I A+++T EG++TA YI LK +K+TRLA G+ +G++++Y +
Sbjct: 127 LITRLQKDDDIKEIIIALNSTPEGESTAMYIAKLLKPAGLKVTRLASGLAVGTDIEYANS 186
Query: 189 GTIFEAIRSR 198
T+ A++ R
Sbjct: 187 ITLKRAVQGR 196
>gi|254524485|ref|ZP_05136540.1| recombination protein RecR [Stenotrophomonas sp. SKA14]
gi|219722076|gb|EED40601.1| recombination protein RecR [Stenotrophomonas sp. SKA14]
Length = 199
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 115/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L +PG G ++A+R HL++++ + LAE +A ++ C+ C + T
Sbjct: 6 LEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAETLALAVERIGHCAQCRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP ++G++
Sbjct: 66 ELCPTCANSSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRELGLEQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 126 LENRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELEYVDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 186 TLSHAFGTRS 195
>gi|227502439|ref|ZP_03932488.1| recombination protein RecR [Corynebacterium accolens ATCC 49725]
gi|227076808|gb|EEI14771.1| recombination protein RecR [Corynebacterium accolens ATCC 49725]
Length = 219
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+
Sbjct: 7 LQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGGVRDGVTFCRICCNISRE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP+D+ I +
Sbjct: 67 DVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPKDLNIST 126
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++R+ + I E+I A EG+ TA Y++ L+ D+
Sbjct: 127 LLQRLGGVLPDRELADSTPEAPLYDDTPTIHEVILATDPNTEGEATAAYLVRLLRDFPDL 186
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 187 KITRLASGMPLGGDLEFVDELTLSRALSGR 216
>gi|295692242|ref|YP_003600852.1| recombination protein recr [Lactobacillus crispatus ST1]
gi|295030348|emb|CBL49827.1| Recombination protein recR [Lactobacillus crispatus ST1]
Length = 199
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI ++PG G ++A R + + +Q + A+++ + + C ICGN+
Sbjct: 7 IAHLIDAYMKLPGIGEKTATRLAFYTMDMPDQDVDDFAKSLVQVKKDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I I+S
Sbjct: 67 DVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEINIKS 126
Query: 130 LIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKNDAVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTAL 199
>gi|303228676|ref|ZP_07315501.1| recombination protein RecR [Veillonella atypica ACS-134-V-Col7a]
gi|302516656|gb|EFL58573.1| recombination protein RecR [Veillonella atypica ACS-134-V-Col7a]
Length = 198
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L R+PG G +SARR HLV+ ++ + L + CSIC N+
Sbjct: 5 LERLVEQLRRLPGIGSKSARRLAYHLVEMPQEEVDRLVNTIVEAKGATRHCSICFNLSAQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSPL+ IG EDI ++
Sbjct: 65 DPCEFCSNHNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPLEGIGAEDIRVKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+
Sbjct: 125 LIARLRDGVVQEVILATDPDVEGEATALYLARLLAPTGIKVTRIARGVPVGGDIEYADEL 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLGGAVVNR 193
>gi|238853619|ref|ZP_04643988.1| recombination protein RecR [Lactobacillus gasseri 202-4]
gi|238833763|gb|EEQ26031.1| recombination protein RecR [Lactobacillus gasseri 202-4]
Length = 199
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + E + ++++ + + CSICGN+ +
Sbjct: 7 IARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCSICGNITES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I I+S
Sbjct: 67 DPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ + +++E+I A++++ EG+ TA Y+ +K +K+T LA G+ +GS+++Y +
Sbjct: 127 LITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTHLAAGLAVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTDL 199
>gi|167750679|ref|ZP_02422806.1| hypothetical protein EUBSIR_01656 [Eubacterium siraeum DSM 15702]
gi|167656358|gb|EDS00488.1| hypothetical protein EUBSIR_01656 [Eubacterium siraeum DSM 15702]
gi|291532022|emb|CBK97607.1| recombination protein RecR [Eubacterium siraeum 70/3]
gi|291558240|emb|CBL35357.1| recombination protein RecR [Eubacterium siraeum V10Sc8a]
Length = 198
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 2/183 (1%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
A++PG G ++A+R +++ E+ + A + + LCS+C N+ TD C IC
Sbjct: 16 FAKLPGIGLKTAQRLAYYILNAPEEEVEQFASGILRARRSMKLCSVCQNICNTDKCDICS 75
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D +R+ VI VVE D+ A+ERS + +YHVL G LSP++ IGP+ + I+ L+ R+
Sbjct: 76 DSRRNHKVICVVESPKDVSAIERSGGFDGVYHVLHGLLSPMNSIGPQQLKIKELMARL-- 133
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
E+I A S TIEG+ TA Y+ +K + VK+TRLAYG+P G+ L+Y DD T+ A+
Sbjct: 134 SDTDEVIMATSPTIEGEATATYLSRMIKQLGVKVTRLAYGLPAGASLEYADDVTLQRALE 193
Query: 197 SRT 199
+R
Sbjct: 194 NRN 196
>gi|309813068|ref|ZP_07706794.1| recombination protein RecR [Dermacoccus sp. Ellin185]
gi|308432952|gb|EFP56858.1| recombination protein RecR [Dermacoccus sp. Ellin185]
Length = 202
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL++ + LAE + + V C +C NV T
Sbjct: 9 VQDLIDELGRLPGVGPKSAQRIAFHLLEADADDVQRLAEVLLKVKETVHFCEVCFNVAET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D QR+ ++I +VE+ D+ A+ER++ YHVLGG+L+P++ +GP D+ I
Sbjct: 69 NLCRVCADPQRNPALICIVEESKDVVAIERTREFRGRYHVLGGALNPIEGVGPGDLHITE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + G+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 129 LMARLSDTSLEEIIIATNPNHTGEATASYLARLIGPMGVTVSRLASGLPVGGDLEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ A R VL
Sbjct: 189 TLGRAFEGRRVL 200
>gi|269216236|ref|ZP_06160090.1| recombination protein RecR [Slackia exigua ATCC 700122]
gi|269130495|gb|EEZ61573.1| recombination protein RecR [Slackia exigua ATCC 700122]
Length = 198
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L R+PG GP+SA+R ++ LA+A+ ++ + V C C N
Sbjct: 7 IQTLLDELERMPGVGPKSAQRIAYWILNSDRATAERLAQAVLDVKSSVHFCPRCFNYAQG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC RDA I VV + D+ A+ER+ LYHVLGG+LSP+D IGP+D+ +
Sbjct: 67 DVCDICGSANRDAHTICVVSEPRDIAAIERTAVYKGLYHVLGGALSPMDGIGPDDLKVAE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ V+ + E++ A + +EG+TTA Y+ +K + ++++RLA G+P+G +L++ D+
Sbjct: 127 LMARLAVEDVTEVLIATNPDVEGETTATYLARLIKPLGIEVSRLASGLPVGGDLEFADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +R L
Sbjct: 187 TLGRAIEARRAL 198
>gi|41406414|ref|NP_959250.1| recombination protein RecR [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463085|ref|YP_879673.1| recombination protein RecR [Mycobacterium avium 104]
gi|254773392|ref|ZP_05214908.1| recombination protein RecR [Mycobacterium avium subsp. avium ATCC
25291]
gi|73621499|sp|Q744M5|RECR_MYCPA RecName: Full=Recombination protein recR
gi|171472969|sp|A0Q9T5|RECR_MYCA1 RecName: Full=Recombination protein recR
gi|41394763|gb|AAS02633.1| RecR [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164372|gb|ABK65269.1| recombination protein RecR [Mycobacterium avium 104]
Length = 203
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLARVRDGVRFCAVCGNVSDD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDASV+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 ERCRICSDPRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ I E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|254444294|ref|ZP_05057770.1| recombination protein RecR [Verrucomicrobiae bacterium DG1235]
gi|198258602|gb|EDY82910.1| recombination protein RecR [Verrucomicrobiae bacterium DG1235]
Length = 197
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L K L R+PG G RSA R ++L+ +K + L+EA+ V CS+CGNV
Sbjct: 5 FEALQKELKRLPGVGFRSAERMAIYLLLEKPEAAERLSEAILRARECVRSCSVCGNVCED 64
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C+IC D +R+ S + VVE V+DL A+E+S A YHVL G LSP++ +GPE++ +
Sbjct: 65 ELCSICADSRREESGSLCVVEHVSDLMAIEKSGAYRGRYHVLHGKLSPINGVGPENLNLD 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +RIE + + ELI A+ +EG+ T HY+ + ++ V+++R+ +G+P G+ + Y D
Sbjct: 125 GLAKRIEEEGVGELILALPNDVEGEATCHYLTELVESDKVEVSRIGFGLPSGASVLYADS 184
Query: 189 GTIFEAIRSR 198
GT+ A+ +R
Sbjct: 185 GTLKSALDAR 194
>gi|325925318|ref|ZP_08186721.1| DNA replication and repair protein RecR [Xanthomonas perforans
91-118]
gi|325544309|gb|EGD15689.1| DNA replication and repair protein RecR [Xanthomonas perforans
91-118]
Length = 197
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 113/190 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA A+ N KV C C + +
Sbjct: 5 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVEKVGHCVQCRDFTES 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G+
Sbjct: 65 EICSICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|291520249|emb|CBK75470.1| recombination protein RecR [Butyrivibrio fibrisolvens 16/4]
Length = 199
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 119/192 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
KEI NLI L+ +P G +SA+R H++ E+ + LA A+ V C C +
Sbjct: 6 KEISNLIAELSDLPSIGSKSAQRLAFHILGMDEEKVNDLANAIIQARKNVRYCKECFTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + +R+ ++I+VVED DL A E++ + +YHVL G++SP+ IGP DI +
Sbjct: 66 DDELCPICSNPKRNKNIIMVVEDTRDLAAYEKTGKFDGVYHVLHGAISPMAGIGPGDIKL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G L+Y+D
Sbjct: 126 KELMVRLQQNDVEEVIVATNSSLEGETTAAYISKLIKPTGIKVSRIASGVPVGGNLEYID 185
Query: 188 DGTIFEAIRSRT 199
+ T+ A+ RT
Sbjct: 186 EVTLLRALDGRT 197
>gi|307267450|ref|ZP_07548938.1| recombination protein RecR [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917531|gb|EFN47817.1| recombination protein RecR [Thermoanaerobacter wiegelii Rt8.B1]
Length = 199
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 121/189 (64%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L+++PG G ++A+R ++ + + L++A+ + K+ C IC N+ T+ C
Sbjct: 11 LIEELSKLPGIGLKTAQRLAFFIINMPPEEVKSLSQAIIDAKEKIKYCRICYNITDTEVC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GPEDI I+ L++
Sbjct: 71 NICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPEDIKIKELLD 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ I+E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L+Y D T+
Sbjct: 131 RVKNGNIKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGDLEYTDIVTLS 190
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 191 RALEGRREL 199
>gi|160914823|ref|ZP_02077037.1| hypothetical protein EUBDOL_00831 [Eubacterium dolichum DSM 3991]
gi|158433363|gb|EDP11652.1| hypothetical protein EUBDOL_00831 [Eubacterium dolichum DSM 3991]
Length = 196
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K E L++ +PG G ++A R ++ + + + A+ + + + CS+CGN+
Sbjct: 4 KRFEQLVEAYRHLPGVGLKTAERYAFETIEWDLETIDEIITALVEVRDGIKKCSVCGNLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D R+ +I VV+ D+ A+E++K + +YHVL G +S I PEDI I
Sbjct: 64 EDNTCDICKDTSRNHEMICVVQSAKDVIAMEKTKEYHGVYHVLNGVISTSKGILPEDINI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ERI+ ++E+I A + T+EG+TTA Y+ L+ D+K+TR+A+G+PMG LDY D
Sbjct: 124 DSLLERID-DHVKEIILATNPTVEGETTAMYLSKLLEPYDIKVTRIAHGLPMGGHLDYAD 182
Query: 188 DGTIFEAIRSR 198
+ T+ +AI +R
Sbjct: 183 ELTLIKAIENR 193
>gi|58580689|ref|YP_199705.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622623|ref|YP_449995.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166710951|ref|ZP_02242158.1| recombination protein RecR [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|188578333|ref|YP_001915262.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae PXO99A]
gi|73621531|sp|Q5H401|RECR_XANOR RecName: Full=Recombination protein recR
gi|123522961|sp|Q2P6V6|RECR_XANOM RecName: Full=Recombination protein recR
gi|58425283|gb|AAW74320.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366563|dbj|BAE67721.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522785|gb|ACD60730.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 197
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 112/190 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA +AN KV C C + +
Sbjct: 5 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDFTES 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD + VVE AD A+E + LY VL G LSPLD IGP ++G+
Sbjct: 65 EICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPRELGLDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|187735818|ref|YP_001877930.1| recombination protein RecR [Akkermansia muciniphila ATCC BAA-835]
gi|187425870|gb|ACD05149.1| recombination protein RecR [Akkermansia muciniphila ATCC BAA-835]
Length = 202
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT-D 70
L+ L ++PG G R A R L +++ +A + V C +CG T +
Sbjct: 12 ELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGFFSTEGE 71
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
PCA C D++RD+ +I VVE D+ +ERS A LYH LGG LSPLD + PED+ IQSL
Sbjct: 72 PCAACRDEERDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPEDLNIQSL 131
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
+ER+ + E+I A + +EG+ TA Y+ LK +D +I+R A G+P GS L + D T
Sbjct: 132 VERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPAGSGLSHADTLT 191
Query: 191 IFEAIRSRTVL 201
+ +A+ RT L
Sbjct: 192 LMKALEGRTRL 202
>gi|166033192|ref|ZP_02236021.1| hypothetical protein DORFOR_02914 [Dorea formicigenerans ATCC
27755]
gi|166027549|gb|EDR46306.1| hypothetical protein DORFOR_02914 [Dorea formicigenerans ATCC
27755]
Length = 198
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI L+R+PG G +SA R HL+ ++ + LA+ M V C C +
Sbjct: 6 NQISKLIDELSRLPGIGAKSASRLAFHLIHMPKEEVKRLADTMVEARENVRYCKECCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP DI +
Sbjct: 66 DQELCPICSNLNRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIKL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+E + E+I A ++++EG+TTA YI +K VK++R+A G+P+G +L+Y+D
Sbjct: 126 KELIRRLE-GDVEEVIIATNSSLEGETTAMYISKLIKPTGVKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTQL 198
>gi|320531495|ref|ZP_08032451.1| recombination protein RecR [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320136292|gb|EFW28284.1| recombination protein RecR [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 202
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +PG GP+SA+R H++ + L EA+ + KV C CGN+
Sbjct: 9 VQDLIDEFGELPGIGPKSAQRMAFHVLAADSAAVERLIEALRAVKAKVRFCETCGNIAEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D+ ++
Sbjct: 69 PQCTICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDDLRVRE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G++L+Y D+
Sbjct: 129 LFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVGADLEYADEV 188
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 189 TLGRAFEGR 197
>gi|326693437|ref|ZP_08230442.1| recombination protein RecR [Leuconostoc argentinum KCTC 3773]
Length = 201
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV--D 67
I LI ++PG G ++A R + + E + ++A+A+ N + C +CGN+
Sbjct: 7 IAKLIASYTKLPGIGQKTATRLAFYTLGMAEDDVIDFSKALASAKNDLTFCEVCGNITEK 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T +PC IC D RD + + VVE D+ A+E ++ + LYHVL G +SP GPEDI +
Sbjct: 67 TINPCVICQDPSRDQTTVFVVEQARDVMAMENTRDYHGLYHVLNGVISPSSGTGPEDINL 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ E ++I E+I + EG+ TA Y+ LK +K+TRLA+G+ +GS++DY
Sbjct: 127 PSLIRRLSEHQEINEVIVGTNVNAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIDYA 186
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A++ RT L
Sbjct: 187 DQLTLIKAVQGRTEL 201
>gi|253999386|ref|YP_003051449.1| recombination protein RecR [Methylovorus sp. SIP3-4]
gi|313201408|ref|YP_004040066.1| recombination protein RecR [Methylovorus sp. MP688]
gi|253986065|gb|ACT50922.1| recombination protein RecR [Methylovorus sp. SIP3-4]
gi|312440724|gb|ADQ84830.1| recombination protein RecR [Methylovorus sp. MP688]
Length = 199
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA R HL+++ LA+A+ N V CS+C
Sbjct: 7 LEQLVESLRCLPGVGPKSALRMAYHLLQRDRSGANGLAQALHNALQVVTHCSLCNTFSED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C RD +++ VVE DL LE+++ Y VL G LSPLD IGP++I ++
Sbjct: 67 IVCPLCAADNRDPTLLCVVEMPTDLMMLEQTRVFQGRYFVLMGKLSPLDGIGPKEIHLEK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R + + E++ A + T+EG+ TAHYI + L+ +K++R+A G+PMG E++++D G
Sbjct: 127 LLKRAQDGVVEEVVLATNYTVEGEATAHYISELLRSRGLKVSRIARGLPMGGEIEHVDSG 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAQALMER 195
>gi|326790141|ref|YP_004307962.1| recombination protein recR [Clostridium lentocellum DSM 5427]
gi|326540905|gb|ADZ82764.1| Recombination protein recR [Clostridium lentocellum DSM 5427]
Length = 200
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 115/192 (59%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G ++ LI+ L+R+PG G +SA+R H++ + + LA + + C C +
Sbjct: 6 GDKMVALIEELSRLPGIGSKSAQRLAFHIISMPVEKVEHLANTLVAAKKHINYCEKCCTI 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C IC D R I+VVED D+ A E++K LYH+L G++SP+ +GP DI
Sbjct: 66 TDDKLCPICKDSNRANGQIMVVEDPRDMAAYEKTKEFKGLYHILHGAISPMMGVGPSDIK 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ERI+ + I E+I A + IEG+ TA YI LK + +KITR+A+G+P+G +L+Y+
Sbjct: 126 IKELLERIQKEAIEEVIIATNPNIEGEATAMYISKLLKPLGIKITRIAHGVPVGGDLEYV 185
Query: 187 DDGTIFEAIRSR 198
D+ T+ A+ R
Sbjct: 186 DEITLTRALEGR 197
>gi|238922754|ref|YP_002936267.1| recombinational DNA repair protein [Eubacterium rectale ATCC 33656]
gi|238874426|gb|ACR74133.1| recombinational DNA repair protein [Eubacterium rectale ATCC 33656]
gi|291526534|emb|CBK92121.1| recombination protein RecR [Eubacterium rectale DSM 17629]
Length = 198
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI LI+ L+++PG G ++A+R H++ ++ L++A+ + V C C +
Sbjct: 7 EISKLIEELSQLPGIGAKTAQRLAFHIINMPKEQAKSLSDAIIDAKEHVRYCKCCYTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D RD I+VVE+ DL A E++ +YHVLGG++SP+ IGP DI ++
Sbjct: 67 DELCPICKDAARDHKTIMVVENTRDLVAYEKTGKYEGVYHVLGGAISPMLGIGPADIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMVRLE-KDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRT 199
T+ A++ RT
Sbjct: 186 VTLLRALQGRT 196
>gi|282897322|ref|ZP_06305324.1| RecR protein [Raphidiopsis brookii D9]
gi|281197974|gb|EFA72868.1| RecR protein [Raphidiopsis brookii D9]
Length = 179
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 23 FGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDA 82
GP+SA+R L+++K+ E + LA+ + + +V LC +C ++ C IC + RD+
Sbjct: 1 MGPKSAQRLALYILKRPESEIEALAQTLIDAKKQVGLCQVCYHLTAEPVCEICRNPHRDS 60
Query: 83 SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIREL 142
I VV D D+ ALE+++ YHVLGG +SP+D +GPE + +Q+L+ R+ +K +E+
Sbjct: 61 QTICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGMGPEQLTLQALVRRVSQQKPQEV 120
Query: 143 IFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
I AIS ++EG+TT YI LK ++TR+A+G+PMG +L+Y D+ T+ +A+ R L
Sbjct: 121 IMAISPSVEGETTTLYIAGLLKPF-TRVTRIAFGLPMGGDLEYADEITLAKALEGRREL 178
>gi|317495189|ref|ZP_07953559.1| recombination protein RecR [Gemella moribillum M424]
gi|316914611|gb|EFV36087.1| recombination protein RecR [Gemella moribillum M424]
Length = 198
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 114/194 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I +LI + +PG G ++A R H +K + + A+++ + K+ C IC +
Sbjct: 5 KPILDLIDSYSLLPGIGRKTAVRLAFHTLKMHDDDIKNFADSLQGLKEKLTNCEICHRLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T C IC D RD S I VV + DL A+E + LYHVL G +SP+D IGP DI I
Sbjct: 65 ETHVCDICSDNSRDKSTICVVANDNDLVAMENMQQYRGLYHVLDGLISPMDGIGPMDINI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL ER + ++E+I A +++ EG+ TA +I LK D+K+TR+A GI GS+++Y+D
Sbjct: 125 KSLFERAQDATVKEIILATNSSPEGEGTASFISRYLKNTDIKVTRIAQGISFGSDIEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI R L
Sbjct: 185 EVTLSRAISGRIEL 198
>gi|300113233|ref|YP_003759808.1| recombination protein RecR [Nitrosococcus watsonii C-113]
gi|299539170|gb|ADJ27487.1| recombination protein RecR [Nitrosococcus watsonii C-113]
Length = 199
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 120/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ G + LI+ L +PG GP+SA+R +L++ + LA+A+ +K+ C C
Sbjct: 2 SLFGLSLGRLIEALCCLPGVGPKSAQRMAFYLLESNREGGQRLAQALLEALDKMTHCQTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TD C++C D +RD + VVE +D+ A+E++ Y VL G LSPLD +GPE
Sbjct: 62 RILSETDLCSLCADSRRDHGQLCVVEMPSDVQAIEQATNYAGRYFVLMGHLSPLDGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+G+ L +R++ +IRE+I A + T+EG+ TA+YI + + + TR+A+G+P+G EL
Sbjct: 122 ALGMDLLAKRLDTDQIREVILATNLTVEGEATAYYISELAQTRGITTTRIAHGVPLGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+++D T+ A +SR L
Sbjct: 182 EFIDSNTLSHAFQSRQHL 199
>gi|241662734|ref|YP_002981094.1| recombination protein RecR [Ralstonia pickettii 12D]
gi|240864761|gb|ACS62422.1| recombination protein RecR [Ralstonia pickettii 12D]
Length = 206
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LA+A++ + CS C
Sbjct: 7 TPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQDICETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K TRLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|78046685|ref|YP_362860.1| recombination protein RecR [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|123585701|sp|Q3BWK3|RECR_XANC5 RecName: Full=Recombination protein recR
gi|78035115|emb|CAJ22760.1| recombination protein RecR [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 197
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA A+ N KV C C + +
Sbjct: 5 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVEKVGHCVQCRDFTES 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G+
Sbjct: 65 EICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|241889846|ref|ZP_04777144.1| recombination protein RecR [Gemella haemolysans ATCC 10379]
gi|241863468|gb|EER67852.1| recombination protein RecR [Gemella haemolysans ATCC 10379]
Length = 198
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 118/194 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I +LI+ + +PG G ++A R H +K + + A+++ N+ +K+ C +CG +
Sbjct: 5 KPILDLIESYSLLPGIGKKTAVRLAFHTLKMNDTDIKNFADSLVNLKDKLTNCEVCGRLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D RD S I VV + DL A+E + +YHVL G +SP+D IGP DI I
Sbjct: 65 EEHVCDICSDPGRDKSTICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDINI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+S+ ER + + ++E+I A +++ EG+ TA +I LK D+++TR+A GI GS+++Y+D
Sbjct: 125 KSIFERAQDETVKEIILATNSSPEGEGTASFISRYLKNTDIRVTRIAQGISFGSDIEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI R L
Sbjct: 185 EVTLSRAISGRIEL 198
>gi|206603201|gb|EDZ39681.1| Recombination protein RecR [Leptospirillum sp. Group II '5-way CG']
Length = 214
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+LI+ L +PG G ++A R HL+K E+ L+ ++ + + LC C N+
Sbjct: 19 FHHLIESLRTLPGIGIKTATRLAFHLLKAPEEEALQLSREISGLREALVLCPQCQNIMDR 78
Query: 70 DP----CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC D RD ++VVED+ L+++ER+ YHVL G LSPL+ IGPE +
Sbjct: 79 DSRLSCCTICADPARDPGTVMVVEDIQTLYSIERTGEFRGRYHVLLGRLSPLEGIGPEAL 138
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L++R +I E+I A S T+EG++TA Y+ K + VK++R+A+GIP+G EL++
Sbjct: 139 RVRELLDRTGTGEIHEMILATSPTVEGESTALYLARLFKPLGVKVSRIAFGIPVGLELEF 198
Query: 186 LDDGTIFEAIRSR 198
+DD T+ ++ +R
Sbjct: 199 VDDITLIRSVEAR 211
>gi|158318301|ref|YP_001510809.1| recombination protein RecR [Frankia sp. EAN1pec]
gi|158113706|gb|ABW15903.1| recombination protein RecR [Frankia sp. EAN1pec]
Length = 199
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++++I L ++PG GP+SA+R HL+ + LA A+ + KV C IC NV +
Sbjct: 6 VQDVIDELGQLPGIGPKSAQRIAFHLLAADPADVRRLASALTELKEKVRFCRICFNVAQS 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I+
Sbjct: 66 ELCRICSDPRRDPTSICVVEESKDVVAIERTREFRGKYHVLGGAINPIGGVGPDDLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A EG+ TA Y+ ++ + + +TRLA G+PMG +L++ D+
Sbjct: 126 LVARLADGTVTEIILATDPNTEGEVTASYLARQIGPMGLTVTRLASGLPMGGDLEWADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R ++
Sbjct: 186 TLGRAFEGRRIV 197
>gi|134094279|ref|YP_001099354.1| recombination protein RecR [Herminiimonas arsenicoxydans]
Length = 185
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 110/182 (60%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP+SA+R HL++ L A++ +V C++C + C C+
Sbjct: 1 MRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNTFTESAVCETCL 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D +R+A+++ VVE D +E++ LY VL G LSPLD IGP+DI ++ LI R
Sbjct: 61 DAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDIHLEKLISRATD 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y+D GTI A+
Sbjct: 121 GIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAML 180
Query: 197 SR 198
R
Sbjct: 181 DR 182
>gi|42525063|ref|NP_970443.1| DNA repair and genetic recombination protein [Bdellovibrio
bacteriovorus HD100]
gi|73621467|sp|Q6MH30|RECR_BDEBA RecName: Full=Recombination protein recR
gi|39577274|emb|CAE81097.1| DNA repair and genetic recombination protein [Bdellovibrio
bacteriovorus HD100]
Length = 204
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 124/198 (62%), Gaps = 6/198 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L+ L+R+PG GP++A+R ++++ + L+EA+ + +V C C N T
Sbjct: 7 LEKLVHELSRLPGIGPKTAQRLAYYILRTGNEYPERLSEALLRVKAEVHDCPTCFNYTDT 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C C D R I VVE+ +D+ +E S A YHVL G++SPL+ IGP+++ I+
Sbjct: 67 DICRYCEDSHRSDESICVVEEPSDIMRIESSGAFRGRYHVLHGAISPLEGIGPKELKIKE 126
Query: 130 LIERIE------VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
LI+R+E I+E+I A+ A +EG TT Y+ +L+G +K++R+A+G+P+GS++
Sbjct: 127 LIDRVEDGLSGTGPAIKEIILALDADLEGDTTILYLAKQLQGKGLKLSRIAHGVPIGSDI 186
Query: 184 DYLDDGTIFEAIRSRTVL 201
D++DD T+ A+++R L
Sbjct: 187 DFVDDRTMGRALQNRVEL 204
>gi|225387322|ref|ZP_03757086.1| hypothetical protein CLOSTASPAR_01074 [Clostridium asparagiforme
DSM 15981]
gi|225046571|gb|EEG56817.1| hypothetical protein CLOSTASPAR_01074 [Clostridium asparagiforme
DSM 15981]
Length = 198
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+++PG G +SA+R H++ + + LA +M + N V C C +
Sbjct: 7 QITKLIEELSKLPGVGAKSAQRLAFHIINMPREQVDELARSMTDAKNNVRYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 RELCPICSSDKRNHKEIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPNDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA YI +K VK+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-SDVEEVIIATNSSLEGETTAMYISKLIKPTGVKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTEL 198
>gi|303231327|ref|ZP_07318062.1| recombination protein RecR [Veillonella atypica ACS-049-V-Sch6]
gi|302514007|gb|EFL56014.1| recombination protein RecR [Veillonella atypica ACS-049-V-Sch6]
Length = 198
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L R+PG G +SARR HLV+ ++ + L + CSIC N+
Sbjct: 5 LERLVEQLRRLPGIGSKSARRLAYHLVEMPQEEVDRLVNTVVEAKGATRHCSICFNLSAQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSPL+ IG EDI ++
Sbjct: 65 DPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPLEGIGAEDIRVKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+
Sbjct: 125 LIARLRDGVVQEVILATDPDVEGEATALYLARLLAPTGIKVTRIARGVPVGGDIEYADEL 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLGGAVVNR 193
>gi|237736576|ref|ZP_04567057.1| recombination protein recR [Fusobacterium mortiferum ATCC 9817]
gi|229420438|gb|EEO35485.1| recombination protein recR [Fusobacterium mortiferum ATCC 9817]
Length = 197
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E LI ++PG G +SA R H+++ +E+ + EA+ + C CG+
Sbjct: 4 KSLERLIDEFNKLPGIGRKSAARLAFHVLEMREEQVESFIEALREAKEVIKRCPKCGDFC 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC ++ RD+ I VVED D+ + E+ +YH+LGG ++PL+ I P+ + I
Sbjct: 64 ENDLCDICSNELRDSHTICVVEDSRDVISFEKMGKYKGMYHILGGKIAPLNGITPDKLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ER+ V ++ E+I A++ +EG+TTA Y+ LK +K+T++A GIPMG +++ D
Sbjct: 124 KSLLERVTVDEVEEVILALNPDLEGETTALYLTKLLKPFGIKVTKIASGIPMGGNIEFAD 183
Query: 188 DGTIFEAIRSR 198
TI A+ R
Sbjct: 184 SATISRALEGR 194
>gi|81427952|ref|YP_394951.1| recombination DNA repair protein RecR [Lactobacillus sakei subsp.
sakei 23K]
gi|123564718|sp|Q38YT8|RECR_LACSS RecName: Full=Recombination protein recR
gi|78609593|emb|CAI54639.1| Recombination DNA repair protein RecR [Lactobacillus sakei subsp.
sakei 23K]
Length = 198
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A R + + E + A+ + + + CS+CGN+
Sbjct: 7 IAKLIESYMKLPGIGNKTATRLAFYTIDMNEDDVTNFAKNLISARRDLHYCSVCGNITDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R +I+VVE D+ ++ER + LYHVL G LSP++ GP+DI I +
Sbjct: 67 DPCEICRDTARSQEMILVVEQPKDVMSMERMNDYHGLYHVLHGVLSPIEGKGPDDINIAN 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R++ +E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++Y D+
Sbjct: 127 LIKRLQKTPAKEVIIATNATPEGEATAMYISRLIKPAGIKVTRLAHGLAVGSDIEYADEM 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLLKAVEGR 195
>gi|325833721|ref|ZP_08166136.1| recombination protein RecR [Eggerthella sp. HGA1]
gi|325485261|gb|EGC87731.1| recombination protein RecR [Eggerthella sp. HGA1]
Length = 198
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L R+PG GP+SA+R ++ + L++A+A + V CS C N
Sbjct: 7 IQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSDAIAEVKETVRFCSRCFNYAED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP+++ I
Sbjct: 67 DLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDELRIAQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L++ D+
Sbjct: 127 LMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLEFADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +R L
Sbjct: 187 TLGRAIEARRPL 198
>gi|154508070|ref|ZP_02043712.1| hypothetical protein ACTODO_00561 [Actinomyces odontolyticus ATCC
17982]
gi|293191861|ref|ZP_06609322.1| recombination protein RecR [Actinomyces odontolyticus F0309]
gi|153797704|gb|EDN80124.1| hypothetical protein ACTODO_00561 [Actinomyces odontolyticus ATCC
17982]
gi|292820444|gb|EFF79429.1| recombination protein RecR [Actinomyces odontolyticus F0309]
Length = 197
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI ++PG GP+SA+R +H++ + + + L +A+ + +V C ICGN+
Sbjct: 6 LADLIDQFGQLPGIGPKSAQRMAMHVLDAEPEDVARLVDAINAVRGRVRHCDICGNLTEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D +RD SVI VV++ D+ A+E ++ YHVLGG + P+ +GP+ + I S
Sbjct: 66 DECSICRDVRRDPSVICVVQEPKDIQAIEGARVFRGRYHVLGGVIDPIHGVGPDQLNIAS 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + +EG+ TA Y+ L + V+ +RLA G+PMG +L+Y D
Sbjct: 126 LMSRLADGTVVEVILATNPNVEGEATAAYLARMLSTMGVETSRLAMGLPMGGDLEYADSV 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 TLGRALEGRRRL 197
>gi|256398117|ref|YP_003119681.1| recombination protein RecR [Catenulispora acidiphila DSM 44928]
gi|256364343|gb|ACU77840.1| recombination protein RecR [Catenulispora acidiphila DSM 44928]
Length = 199
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L +P GP+SA+R HL++ + LAE + +V C++C NV
Sbjct: 6 VQDLIDELGHLPNIGPKSAQRIAFHLLQADPADVRRLAEVLIRAKEQVRFCAVCFNVAEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD S + VVE+ D+ A+E+++ YHVLGG++SP+D +GP+D+ ++
Sbjct: 66 QECKICRDPRRDPSSLCVVEESKDVVAVEKTREFRGRYHVLGGAISPIDGVGPDDLRVKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ I E+I A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 126 LLKRLADGVITEVILATDPNLEGEATATYLARLIKPLGLRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFEGRRQL 197
>gi|134096870|ref|YP_001102531.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 2338]
gi|133909493|emb|CAL99605.1| putative recombination and repair protein [Saccharopolyspora
erythraea NRRL 2338]
Length = 190
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I L R+PG GP+SA+R HL+ + + L E + + V C ICGNV C
Sbjct: 1 MIDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICGNVSEEPTC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + ++ L+
Sbjct: 61 RICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQLRVRELLT 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTI 191
RI +I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+ T+
Sbjct: 121 RIGRDEITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDLEFADELTL 180
Query: 192 FEAIRSR 198
A+ R
Sbjct: 181 GRALSGR 187
>gi|210616980|ref|ZP_03291315.1| hypothetical protein CLONEX_03537 [Clostridium nexile DSM 1787]
gi|210149503|gb|EEA80512.1| hypothetical protein CLONEX_03537 [Clostridium nexile DSM 1787]
Length = 198
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+R+PG G +SA+R H++ ++ + LA +M V C C +
Sbjct: 7 QISKLIEELSRLPGIGAKSAQRLAFHIINMPKEQVQSLAGSMTEARENVRYCKQCHTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + RDA I+VVE DL A E++ +YHVL G++SP+ IGP DI ++
Sbjct: 67 QELCPICSNSNRDAKTIMVVETTRDLAAYEKTGKYQGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMERLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRT 199
T+ A+ RT
Sbjct: 186 VTLLRALEGRT 196
>gi|145221880|ref|YP_001132558.1| recombination protein RecR [Mycobacterium gilvum PYR-GCK]
gi|315446385|ref|YP_004079264.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1]
gi|145214366|gb|ABP43770.1| DNA replication and repair protein RecR [Mycobacterium gilvum
PYR-GCK]
gi|315264688|gb|ADU01430.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1]
Length = 203
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L + + + V CS+CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRVRDGVTFCSVCGNVSDE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDAS+I VVE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 ERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ + E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLSVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|289662389|ref|ZP_06483970.1| recombination protein RecR [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669154|ref|ZP_06490229.1| recombination protein RecR [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 197
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA +AN KV C C + +
Sbjct: 5 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDFTES 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G+
Sbjct: 65 EICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|320536108|ref|ZP_08036161.1| recombination protein RecR [Treponema phagedenis F0421]
gi|320147025|gb|EFW38588.1| recombination protein RecR [Treponema phagedenis F0421]
Length = 197
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 113/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG G +SA R HL+K+ LA+++ ++ K+ CS+CG
Sbjct: 4 LDDLIDNFSRLPGIGKKSAMRLAYHLLKRSPTEAQALAKSILMLHEKIHPCSVCGAFTDQ 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RD S I VVE D+ + N L+HVLGG ++PL+ +GP+ + I
Sbjct: 64 DLCLICADPLRDTSTICVVEQPQDVETVAAVAEYNGLFHVLGGVIAPLEGVGPDQLRIGE 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+RI+ I+E+I A + TIEG TTA Y+ L+ + ++RLA G+P+G +L+Y D
Sbjct: 124 LIKRIQQGNIKEIILATNPTIEGDTTALYLQKILQDFSLTVSRLASGLPVGGDLEYTDRL 183
Query: 190 TIFEAIRSR 198
T+ + R R
Sbjct: 184 TLARSFRGR 192
>gi|238061525|ref|ZP_04606234.1| recombination protein recR [Micromonospora sp. ATCC 39149]
gi|237883336|gb|EEP72164.1| recombination protein recR [Micromonospora sp. ATCC 39149]
Length = 197
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R H++ + LA A+ + + V C+ C NV +
Sbjct: 6 IQDLIDELGRLPGVGPKSAQRIAFHVLSADPADINRLAGALRKVKDLVRFCTTCYNVAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP+++ I+
Sbjct: 66 EQCRICRDPRRGDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDNLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLSGGAVRELILATDPNTEGEATATYLALMVKPMGISVTRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|323465899|gb|ADX69586.1| Recombination protein recR [Lactobacillus helveticus H10]
Length = 190
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 117/190 (61%), Gaps = 1/190 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+I R+PG G ++A R + + E+ + ++A+ + N + C ICGN+ + C
Sbjct: 1 MIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGNITEKEVC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I I+SLI
Sbjct: 61 DICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEINIKSLIT 120
Query: 133 RIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y + T+
Sbjct: 121 RLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANSITL 180
Query: 192 FEAIRSRTVL 201
A++ RT L
Sbjct: 181 KRAVQGRTAL 190
>gi|239623038|ref|ZP_04666069.1| recombination protein RecR [Clostridiales bacterium 1_7_47_FAA]
gi|239522405|gb|EEQ62271.1| recombination protein RecR [Clostridiales bacterium 1_7_47FAA]
Length = 198
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+++PG G +SA+R H++ ++ + LA AM N V C C +
Sbjct: 7 QITKLIEELSKLPGVGAKSAQRLAFHIINMPKEQVEELAGAMTGARNNVRYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 KELCPICSSDRRNHKTIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPNDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-SDVEEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRT 199
T+ A+ RT
Sbjct: 186 VTLLRALEGRT 196
>gi|56476072|ref|YP_157661.1| recombination protein RecR [Aromatoleum aromaticum EbN1]
gi|73621456|sp|Q5P7F1|RECR_AZOSE RecName: Full=Recombination protein recR
gi|56312115|emb|CAI06760.1| DNA repair DNA recombination zinc-finger protein [Aromatoleum
aromaticum EbN1]
Length = 197
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ ++ LI L +PG GP+SA+R HL+++ ++ LA A+ N + C C
Sbjct: 1 MSPSSLDELIDALRGLPGVGPKSAQRMAYHLLQRDQRGAERLARALGNALAVLRHCERCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
T+ C C QRDAS++ VVE ADL +E++ A N LY+VL G LSPLD IGP +
Sbjct: 61 TFTETEICQRCASPQRDASLLCVVEMPADLAVIEQTHAYNGLYYVLMGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L+ R+ ++E+I A + T EG+ TAH + + L ++++RL+ G+P+G EL+
Sbjct: 121 LKFDKLLARVADSTVQEVILATNFTNEGEATAHIVAELLAARGIRVSRLSRGVPVGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D GTI +A+ R L
Sbjct: 181 HTDTGTIAQALVERRPL 197
>gi|225378765|ref|ZP_03755986.1| hypothetical protein ROSEINA2194_04435 [Roseburia inulinivorans DSM
16841]
gi|225209394|gb|EEG91748.1| hypothetical protein ROSEINA2194_04435 [Roseburia inulinivorans DSM
16841]
Length = 217
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+ +PG G +SA+R H++ + + L+EA+ N V C C +
Sbjct: 26 QINKLIQELSELPGIGAKSAQRLAFHILNMPVEQVEGLSEAIINARKNVRYCKECFTLTD 85
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D R+ I+VVE+ DL A E+++ + +YHVL G++SP+ IGP DI ++
Sbjct: 86 DELCPICKDASRNHKTIMVVENTRDLAAYEKTQKYDGVYHVLHGAISPMLGIGPNDIKLK 145
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 146 ELMQRLQ-QDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 204
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 205 VTLLRALEGRTEL 217
>gi|187477419|ref|YP_785443.1| recombination protein RecR [Bordetella avium 197N]
gi|123513969|sp|Q2KVU4|RECR_BORA1 RecName: Full=Recombination protein recR
gi|115422005|emb|CAJ48527.1| recombination protein [Bordetella avium 197N]
Length = 202
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 112/186 (60%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L R+PG G RSARR HL++ Q L A+A + C+ C + D C
Sbjct: 14 LIEALRRLPGVGARSARRMAYHLLQHDVQGADMLGRALAGAVQNLRRCARCNSFTEDDVC 73
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +RDAS++ +VE AD +E S LY+VL G L+PL+ +GP ++ Q +++
Sbjct: 74 VICANPKRDASLLCIVETPADQNVIESSHGYRGLYYVLMGRLAPLEGVGPRELDFQRVLD 133
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R ++E+I A + T EG+TTAH++ + L +K+TRLA G+P GSEL+Y+D GTI
Sbjct: 134 RAADGLVQEVILATNFTAEGETTAHFLGEALAERGLKVTRLARGVPAGSELEYVDAGTIA 193
Query: 193 EAIRSR 198
A+ R
Sbjct: 194 WALMER 199
>gi|302872028|ref|YP_003840664.1| recombination protein RecR [Caldicellulosiruptor obsidiansis OB47]
gi|302574887|gb|ADL42678.1| recombination protein RecR [Caldicellulosiruptor obsidiansis OB47]
Length = 199
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ K T I L++ L ++PG G ++A+R +++ K + + LA+A+ + LC
Sbjct: 1 MQNKETS--ISKLVQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKTSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 RVCCNFTEDEVCPICKDEKRDRSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ I+E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLLKRLSDPAIKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSR 198
+++Y D+ TI +AI R
Sbjct: 179 GDIEYADEVTILKAIEGR 196
>gi|225018613|ref|ZP_03707805.1| hypothetical protein CLOSTMETH_02563 [Clostridium methylpentosum
DSM 5476]
gi|224948607|gb|EEG29816.1| hypothetical protein CLOSTMETH_02563 [Clostridium methylpentosum
DSM 5476]
Length = 201
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A +PG G ++A R +++ ++ A A+ ++ + CS+C N C
Sbjct: 11 LAEQFASLPGIGMKTAWRLAFYVLTMTKEQSDEFAHAITTAHDTIKNCSVCQNYTDKLVC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D RD SVI VVE D+ A ERS+ LYHVL G +SP+D IGP+ + I+ L+
Sbjct: 71 DICADGMRDKSVICVVESPKDVVAFERSRGFKGLYHVLHGLISPMDGIGPDQLFIKQLLS 130
Query: 133 RI--EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
RI ++++E+I A + T+EG+ TA Y+ LK + VK+TRLAYG+P+G EL++ D+ T
Sbjct: 131 RIGDPQQEVKEVIMATNPTVEGEATAMYLSKLLKPLGVKVTRLAYGVPVGGELEFADEMT 190
Query: 191 IFEAIRSRTVL 201
+ +A+ +R L
Sbjct: 191 LSKALENRNEL 201
>gi|329572902|gb|EGG54523.1| recombination protein RecR [Enterococcus faecalis TX1467]
Length = 164
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 106/160 (66%)
Query: 39 KEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALE 98
KE+ A+A+ ++ + CSICGN+ DPC IC D+ RD S+I+VVE+ D+ A+E
Sbjct: 2 KEEDANAFAKALISVKRDLHFCSICGNITEEDPCEICQDKNRDRSIILVVEEPKDVMAME 61
Query: 99 RSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHY 158
+ + LYH L G LSP++ GPEDI I SLI+R+ +++E+I A +AT EG+ TA Y
Sbjct: 62 KMREYQGLYHALHGVLSPMEGTGPEDINIASLIKRLHDDEVKEVIIATNATTEGEATAMY 121
Query: 159 IMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +K + +TRLA+G+ +GS+++Y D+ T+ +A+ R
Sbjct: 122 LSRLIKPAGITVTRLAHGLSVGSDIEYADEITLLKAVEGR 161
>gi|160936874|ref|ZP_02084238.1| hypothetical protein CLOBOL_01762 [Clostridium bolteae ATCC
BAA-613]
gi|158440064|gb|EDP17811.1| hypothetical protein CLOBOL_01762 [Clostridium bolteae ATCC
BAA-613]
Length = 198
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+++PG G +SA+R H++ ++ + LA AM N V C C +
Sbjct: 7 QITKLIEELSKLPGVGAKSAQRLAFHIINMPKEQVEELAGAMTGARNNVRYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 KELCPICSSDRRNHKTIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-SDVEEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTEL 198
>gi|225850087|ref|YP_002730321.1| recombination protein RecR [Persephonella marina EX-H1]
gi|225646377|gb|ACO04563.1| recombination protein RecR [Persephonella marina EX-H1]
Length = 202
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 121/188 (64%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ ++ +PG+G +SA+R ++L+ + + + ++ K+ CS CG + C+
Sbjct: 15 VEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSECGLYTEEEICS 74
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC ++RD SVI VVE+ D +A+E++ +YHV+GG LSPL+ I ED+ I+ L+ER
Sbjct: 75 ICSSEERDRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAEDLNIEKLVER 134
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
++ ++E+I A + T+EG+ TA YI + LK DV I+R+AYG+P G+ L+ DD T+ +
Sbjct: 135 VDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVLENADDFTLSK 194
Query: 194 AIRSRTVL 201
A+ +T++
Sbjct: 195 ALEHKTII 202
>gi|331003028|ref|ZP_08326540.1| recombination protein recR [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330413072|gb|EGG92447.1| recombination protein recR [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 198
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L+++PG G +SA+R H++ + + L++A+ + V C C +
Sbjct: 7 HISKLIEELSKLPGVGAKSAQRLAFHIIGMSSEQVDSLSKAIKDAKGNVNYCRECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC ++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP DI ++
Sbjct: 67 GEVCPICASEKRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPADIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R+E + E+I A ++T+EG+TTA YI +K ++++R+A G+P+G +L+Y+D+
Sbjct: 127 ELIKRLE-SDVNEVIIATNSTLEGETTAMYIAKLIKPTGIEVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R +L
Sbjct: 186 VTLLRALEGRRLL 198
>gi|269120331|ref|YP_003308508.1| recombination protein RecR [Sebaldella termitidis ATCC 33386]
gi|268614209|gb|ACZ08577.1| recombination protein RecR [Sebaldella termitidis ATCC 33386]
Length = 194
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++N+I A++PG G +SA R H+++ +++ L + K+ C ICGN+
Sbjct: 2 KSLDNIIDEFAKLPGIGRKSAMRIAFHVLEMEDEELLNFITILKEAKEKIKKCEICGNLT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D++RD+S+I +V+D D+ A E+SK N LYHVLGG + PL+ IG +D+ I
Sbjct: 62 ENDICEICSDEERDSSIICIVKDSRDIIAFEKSKTYNGLYHVLGGIIDPLNGIGVDDLDI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +R+ ++E+I A+ ++EG+TT+ Y+ +K ++ ++R+A GIPMG +++ D
Sbjct: 122 DKLTKRL-TGNVKEVILALDPSLEGETTSLYLSKIIKEKEIIVSRIASGIPMGGNIEFSD 180
Query: 188 DGTIFEAIRSR 198
T+ ++ R
Sbjct: 181 IATLSRSLEGR 191
>gi|284989078|ref|YP_003407632.1| recombination protein RecR [Geodermatophilus obscurus DSM 43160]
gi|284062323|gb|ADB73261.1| recombination protein RecR [Geodermatophilus obscurus DSM 43160]
Length = 199
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + +G L A+ + +V CS C NV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLAAESADVGRLVAALQRVQAEVRFCSTCYNVAEG 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ ++
Sbjct: 66 EQCRICRDPRRADDVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRVKE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ + + + ++RLA G+P+G +L+Y D+
Sbjct: 126 LMTRLMSGAVTELIIATDPNLEGEATAAYLARLVGPLGLAVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|59712292|ref|YP_205068.1| recombination protein RecR [Vibrio fischeri ES114]
gi|197334321|ref|YP_002156504.1| recombination protein RecR [Vibrio fischeri MJ11]
gi|71648824|sp|Q5E466|RECR_VIBF1 RecName: Full=Recombination protein recR
gi|226726313|sp|B5FFM4|RECR_VIBFM RecName: Full=Recombination protein recR
gi|59480393|gb|AAW86180.1| gap repair protein [Vibrio fischeri ES114]
gi|197315811|gb|ACH65258.1| recombination protein RecR [Vibrio fischeri MJ11]
Length = 200
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R HL+++ Q LA+A++ +++ CS C
Sbjct: 7 LEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSQAMSEIGHCSECRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC++ +R AS + +VE AD+ A+E + + Y VL G LSPLD IGP DIG+
Sbjct: 67 DTCAICLNPKRQASGEMCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+PMG EL+ +D
Sbjct: 127 LLDHRLNRGDIKEVILATNPTVEGEATAHYIAELCQEHQVPASRIAHGVPMGGELELVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ +I R L
Sbjct: 187 TTLSHSILGRQKL 199
>gi|269467850|gb|EEZ79593.1| recombinational DNA repair protein, RecF pathway [uncultured SUP05
cluster bacterium]
Length = 194
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE+L K +PG G ++A+R HL+++ + LA+A+ + V CS C +
Sbjct: 2 IESLNKAFCTLPGVGSKTAQRFVYHLLERNREGGLDLAKALVDAMEHVKHCSSCRTLSEK 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD+S + ++E D+ A+E+S Y VL G LSP+D IG ++G+
Sbjct: 62 TICDICANDVRDSSQLCIIETPTDIHAIEKSGVYKGKYFVLSGYLSPIDGIGAAELGLDE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ++++ + I E+I A +AT+EG+ TAHYI + K DVKITR+A+GIP+G EL+Y D
Sbjct: 122 LEQKLKDQAIEEIILATNATVEGEVTAHYISNMAKQFDVKITRIAHGIPIGGELEYADIN 181
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 182 TIAHALSGR 190
>gi|6634573|emb|CAB64470.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPSRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEA 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|154505549|ref|ZP_02042287.1| hypothetical protein RUMGNA_03086 [Ruminococcus gnavus ATCC 29149]
gi|153794207|gb|EDN76627.1| hypothetical protein RUMGNA_03086 [Ruminococcus gnavus ATCC 29149]
Length = 198
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ +R+PG G +SA+R H++ + + LA+++ + N V C+ C +
Sbjct: 6 NQISRLIEEFSRLPGIGAKSAQRLAFHIINMPKDQVENLAKSIVDARNNVRYCAQCCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + +RD I+VVE DL A E++ N +YHVL G++SP+ IGP DI +
Sbjct: 66 DRELCPICSNPERDQRTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER++ + + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D
Sbjct: 126 KELMERLQ-QDVDEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTEL 198
>gi|120406470|ref|YP_956299.1| recombination protein RecR [Mycobacterium vanbaalenii PYR-1]
gi|171769172|sp|A1TGJ3|RECR_MYCVP RecName: Full=Recombination protein recR
gi|119959288|gb|ABM16293.1| DNA replication and repair protein RecR [Mycobacterium vanbaalenii
PYR-1]
Length = 203
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L + + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNKVRDGVTFCAVCGNVSDE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDAS+I VVE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 ERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ ++ E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLNRIGERVDGVEVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|297569217|ref|YP_003690561.1| recombination protein RecR [Desulfurivibrio alkaliphilus AHT2]
gi|296925132|gb|ADH85942.1| recombination protein RecR [Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG G ++A R +HL+++ LA+++ ++ + +CS C
Sbjct: 8 LARLIADFGRLPGVGRKTASRLAMHLLRRPAVEAQALAKSLTELHQLITMCSTCCAFSEA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC + R+ ++ VVE+ ADL A+E++ + YH+L G LSP D IGP ++ I
Sbjct: 68 DPCEICCNPDREQGLVCVVEEPADLVAIEKTASFKGKYHILHGVLSPADGIGPGELKIDR 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK-GIDVKITRLAYGIPMGSELDYLDD 188
L+ERI ++ E++ A S+T+ G+ TA Y++ L+ V+ITRLA GIPMG ++ Y D+
Sbjct: 128 LLERIRRDQVNEVLIATSSTVPGEATAAYLIRHLQENSKVRITRLACGIPMGMDIKYADE 187
Query: 189 GTIFEAIRSR 198
T+ AI SR
Sbjct: 188 LTLSRAIASR 197
>gi|309782343|ref|ZP_07677069.1| recombination protein RecR [Ralstonia sp. 5_7_47FAA]
gi|308918879|gb|EFP64550.1| recombination protein RecR [Ralstonia sp. 5_7_47FAA]
Length = 207
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L+ L +PG GP+SA+R HL++ + LA+A++ + CS C
Sbjct: 8 TPSALQMLVDALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDICETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K TRLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|260887503|ref|ZP_05898766.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
gi|330837883|ref|YP_004412463.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
gi|260862790|gb|EEX77290.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
gi|329745647|gb|AEB99003.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
Length = 201
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 120/192 (62%), Gaps = 3/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ +PG G ++A R H++ LAEA+ K+ CS+C N+
Sbjct: 7 LAKLIEHFRALPGIGSKTAVRLAYHVLDMDAAKARALAEAIVEAREKIGFCSVCCNLSDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC ++RD S I VVE D+ A+ER K LYHVL GSLSPL +GPE++ ++
Sbjct: 67 DPCAICASEKRDRSKICVVEQPQDVAAVERMKDYKGLYHVLHGSLSPLSGVGPENLRVKE 126
Query: 130 LIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R+E + +++E+I A + T+EG+ TA Y+ LK +K+TR+A+G+P+G +L+Y
Sbjct: 127 LLHRLEGEAGAEVQEIIMATNPTVEGEATAMYLARLLKPAGLKVTRIAHGLPIGGDLEYA 186
Query: 187 DDGTIFEAIRSR 198
D+ T+ +A+ +R
Sbjct: 187 DEVTLAKALENR 198
>gi|312127801|ref|YP_003992675.1| recombination protein recr [Caldicellulosiruptor hydrothermalis
108]
gi|311777820|gb|ADQ07306.1| recombination protein RecR [Caldicellulosiruptor hydrothermalis
108]
Length = 199
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 122/198 (61%), Gaps = 2/198 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+K I LI+ L ++PG G ++A+R +++ K + + LA+A+ + LC
Sbjct: 1 MQQK--ENSISKLIQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKTSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 KVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G
Sbjct: 119 YPEQLTIDVLMKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSR 198
+++Y D+ TI +AI R
Sbjct: 179 GDIEYADEVTILKAIEGR 196
>gi|108801866|ref|YP_642063.1| recombination protein RecR [Mycobacterium sp. MCS]
gi|119871019|ref|YP_940971.1| recombination protein RecR [Mycobacterium sp. KMS]
gi|126437834|ref|YP_001073525.1| recombination protein RecR [Mycobacterium sp. JLS]
gi|123177963|sp|Q1B277|RECR_MYCSS RecName: Full=Recombination protein recR
gi|171769261|sp|A1UMX3|RECR_MYCSK RecName: Full=Recombination protein recR
gi|171855239|sp|A3Q7A7|RECR_MYCSJ RecName: Full=Recombination protein recR
gi|108772285|gb|ABG11007.1| DNA replication and repair protein RecR [Mycobacterium sp. MCS]
gi|119697108|gb|ABL94181.1| DNA replication and repair protein RecR [Mycobacterium sp. KMS]
gi|126237634|gb|ABO01035.1| DNA replication and repair protein RecR [Mycobacterium sp. JLS]
Length = 203
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L + I + V C +CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRIRDGVKFCEVCGNVSDA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +RDAS++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 DRCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ + E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|150392455|ref|YP_001322504.1| recombination protein RecR [Alkaliphilus metalliredigens QYMF]
gi|166918734|sp|A6TXC7|RECR_ALKMQ RecName: Full=Recombination protein recR
gi|149952317|gb|ABR50845.1| recombination protein RecR [Alkaliphilus metalliredigens QYMF]
Length = 199
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A+R H++ + L+ ++ + C IC N+
Sbjct: 8 IAKLIDEFSKLPGIGRKTAQRLAFHVISMGYEDAEKLSNSIIEAKKSIKYCRICTNLTDK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R SVI V+ED D+ A+ER++ YHVL G++SPL+ IGPE+I I+
Sbjct: 68 EVCNICSDPNRKKSVICVIEDPRDVVAMERTREFKGQYHVLHGAISPLEGIGPEEINIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ + E+I A++ IEG+ TA YI LK I +K++R+A+GIP+G +L+Y D+
Sbjct: 128 LLIRLQEHPVEEVILAMNPNIEGEATAMYIGKLLKPIGIKVSRIAHGIPVGGDLEYADEV 187
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 188 TLSKALEGR 196
>gi|28198954|ref|NP_779268.1| recombination protein RecR [Xylella fastidiosa Temecula1]
gi|182681663|ref|YP_001829823.1| recombination protein RecR [Xylella fastidiosa M23]
gi|32129945|sp|Q87CK8|RECR_XYLFT RecName: Full=Recombination protein recR
gi|28057052|gb|AAO28917.1| recombination protein RecR [Xylella fastidiosa Temecula1]
gi|182631773|gb|ACB92549.1| recombination protein RecR [Xylella fastidiosa M23]
gi|307580099|gb|ADN64068.1| recombination protein RecR [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 198
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C + T
Sbjct: 6 LEQLIDAFRILPGVGQKTAQRMAYHMLEREREGGQRLADVLSRAIEKIGHCTECRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP ++G+
Sbjct: 66 KICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHELGLDH 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+YLD G
Sbjct: 126 LGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELEYLDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +RT
Sbjct: 186 TLSHAFGTRT 195
>gi|302870392|ref|YP_003839029.1| recombination protein RecR [Micromonospora aurantiaca ATCC 27029]
gi|315503331|ref|YP_004082218.1| recombination protein recr [Micromonospora sp. L5]
gi|302573251|gb|ADL49453.1| recombination protein RecR [Micromonospora aurantiaca ATCC 27029]
gi|315409950|gb|ADU08067.1| recombination protein RecR [Micromonospora sp. L5]
Length = 197
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 116/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R H++ + LA A+ + + V C+ C NV +
Sbjct: 6 IQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLAGALRKVKDLVRFCTTCYNVAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP+++ I+
Sbjct: 66 EQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDNLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLGGGEVRELILATDPNTEGEATATYLALMVKPMGIAVTRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|294794413|ref|ZP_06759549.1| recombination protein RecR [Veillonella sp. 3_1_44]
gi|294454743|gb|EFG23116.1| recombination protein RecR [Veillonella sp. 3_1_44]
Length = 198
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 5 LERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSAQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++
Sbjct: 65 DPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A IEG+ TA Y+ L +K+TR+A G+P+G +++Y D+
Sbjct: 125 LIARLRDGVVQEVILATDPDIEGEATALYLARLLTPSGIKVTRIARGVPVGGDIEYADEL 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLGGAVVNR 193
>gi|312134985|ref|YP_004002323.1| recombination protein recr [Caldicellulosiruptor owensensis OL]
gi|311775036|gb|ADQ04523.1| recombination protein RecR [Caldicellulosiruptor owensensis OL]
Length = 199
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ K T I L++ L ++PG G ++A+R +++ K + + LA+A+ + LC
Sbjct: 1 MQNKETS--ISKLVQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKISTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD SVI VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 KVCCNFTEEEVCPICKDEKRDRSVICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ I+E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLLKRLSDPAIKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSR 198
+++Y D+ TI +AI R
Sbjct: 179 GDIEYADEVTILKAIEGR 196
>gi|325264935|ref|ZP_08131663.1| recombination protein RecR [Clostridium sp. D5]
gi|324029924|gb|EGB91211.1| recombination protein RecR [Clostridium sp. D5]
Length = 198
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ +R+PG G +SA+R H++ ++ + LA+++ + N V C+ C +
Sbjct: 6 NQISRLIEEFSRLPGIGAKSAQRLAFHIINMPQEQVENLAKSLVDARNNVRYCAQCCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP DI +
Sbjct: 66 DRELCPICNNPDRDQKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D
Sbjct: 126 KELMERLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTEL 198
>gi|121604577|ref|YP_981906.1| recombination protein RecR [Polaromonas naphthalenivorans CJ2]
gi|171769290|sp|A1VMV7|RECR_POLNA RecName: Full=Recombination protein recR
gi|120593546|gb|ABM36985.1| DNA replication and repair protein RecR [Polaromonas
naphthalenivorans CJ2]
Length = 208
Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L + L ++PG G +SA R HL++ + +A A+ + + C++C +
Sbjct: 7 LDGLTQALRKLPGVGAKSAARMAFHLLQHDKPGALQIARALEHAVQSIRHCALCNTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C + QRD S + VVE AD ALER+ A LY VL G LSPLD +GP DIG+Q
Sbjct: 67 EVCVTCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGVGPNDIGLQK 126
Query: 130 LIER------------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
L +R ++++E+I A + T EG+ TAH I LK +++TRLA G+
Sbjct: 127 LFDRAVPKDEHGQPLPAASREVQEVILATNFTAEGEATAHVIAQALKSRGMQVTRLARGV 186
Query: 178 PMGSELDYLDDGTIFEAIRSR 198
P+GSEL+Y+D GTI A+ R
Sbjct: 187 PVGSELEYVDLGTIAHALTDR 207
>gi|325917359|ref|ZP_08179574.1| DNA replication and repair protein RecR [Xanthomonas vesicatoria
ATCC 35937]
gi|325536400|gb|EGD08181.1| DNA replication and repair protein RecR [Xanthomonas vesicatoria
ATCC 35937]
Length = 197
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 113/190 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ +PG G +SA+R H+++++ + LA A+AN KV C+ C +
Sbjct: 5 LDQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATALANAVEKVGHCAQCRDFTEA 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD + VVE AD A+E + +Y +L G LSPLD IGP ++G+
Sbjct: 65 QICPICANVSRDRQQLCVVESPADRLAIEHATGYRGVYFILQGRLSPLDGIGPRELGLDQ 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ +I E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LGERLAAGEITEMIIATNATVEGEATAHYLAQLARQHGVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|255324354|ref|ZP_05365473.1| recombination protein RecR [Corynebacterium tuberculostearicum
SK141]
gi|311741091|ref|ZP_07714916.1| recombination protein R [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298573|gb|EET77871.1| recombination protein RecR [Corynebacterium tuberculostearicum
SK141]
gi|311303893|gb|EFQ79971.1| recombination protein R [Corynebacterium pseudogenitalium ATCC
33035]
Length = 218
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 118/210 (56%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+
Sbjct: 6 LQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGAVRDGVTFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP D+ I +
Sbjct: 66 DVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPRDLNIST 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++R+ I E+I A EG+ TA Y++ L+ D+
Sbjct: 126 LLQRLGGVLPDRELADSTPEAPLYDATPTIHEVILATDPNTEGEATAAYLVRLLRDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 186 KITRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|190573047|ref|YP_001970892.1| recombination protein RecR [Stenotrophomonas maltophilia K279a]
gi|190010969|emb|CAQ44578.1| putative recombination protein RecR [Stenotrophomonas maltophilia
K279a]
Length = 199
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L +PG G ++A+R HL++++ + LAE +A ++ C C + T
Sbjct: 6 LEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAETLALAVERIGHCVQCRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP ++G++
Sbjct: 66 ELCPTCANGSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRELGLEQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 126 LERRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELEYVDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 186 TLSHAFGTRS 195
>gi|124267718|ref|YP_001021722.1| recombination protein RecR [Methylibium petroleiphilum PM1]
gi|171769839|sp|A2SIU8|RECR_METPP RecName: Full=Recombination protein recR
gi|124260493|gb|ABM95487.1| DNA replication and repair protein RecR [Methylibium petroleiphilum
PM1]
Length = 196
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L + L R+PG G +SA+R HL++ + LA A+ V C C
Sbjct: 7 LESLTEALRRLPGVGVKSAQRMAYHLLQHDREGALRLARALEQAVATVRHCERCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+ C+D R+ + VVE AD A+ERS + + LY VL G LSPLD IG DIG++
Sbjct: 67 PVCSTCLDPARERRQLCVVETPADQAAVERSGSYHGLYFVLMGRLSPLDGIGVHDIGLEK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R +++ELI A + T EG+ TAH I LKG +TRLA G+P+GSEL+Y+D G
Sbjct: 127 LLARATDGEVQELIVATNFTAEGEATAHVIAQALKGRGPSVTRLARGVPVGSELEYVDLG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIAHALSDR 195
>gi|253580409|ref|ZP_04857674.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848139|gb|EES76104.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 199
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L+ +PG G +SA+R H++ + + L ++ V C C +
Sbjct: 7 HINKLIEQLSHLPGIGAKSAQRLAFHIMNMPKDQVEQLTSSITGARENVQYCKCCCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +RD SVI+VVE+ DL A E++ + +YHVL G++SP+ IGP+DI ++
Sbjct: 67 REICPICSNDKRDHSVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPDDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R+ +++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLAKDEVKEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 VTLLRALEGRVEL 199
>gi|238018441|ref|ZP_04598867.1| hypothetical protein VEIDISOL_00268 [Veillonella dispar ATCC 17748]
gi|282849746|ref|ZP_06259130.1| recombination protein RecR [Veillonella parvula ATCC 17745]
gi|294792634|ref|ZP_06757781.1| recombination protein RecR [Veillonella sp. 6_1_27]
gi|237864912|gb|EEP66202.1| hypothetical protein VEIDISOL_00268 [Veillonella dispar ATCC 17748]
gi|282580683|gb|EFB86082.1| recombination protein RecR [Veillonella parvula ATCC 17745]
gi|294456533|gb|EFG24896.1| recombination protein RecR [Veillonella sp. 6_1_27]
Length = 198
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 5 LERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSAQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++
Sbjct: 65 DPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+
Sbjct: 125 LIARLRDGVVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYADEL 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLGGAVVNR 193
>gi|183985200|ref|YP_001853491.1| recombination protein RecR [Mycobacterium marinum M]
gi|183178526|gb|ACC43636.1| recombination protein RecR [Mycobacterium marinum M]
Length = 203
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCGNVSDD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE + I+
Sbjct: 66 ERCRICADPRRDGSLVCVVEEPKDIQAVERTREYRGRYHVLGGALDPLSGIGPEQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ +R++ I E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALTGRRAM 202
>gi|254427941|ref|ZP_05041648.1| recombination protein RecR [Alcanivorax sp. DG881]
gi|196194110|gb|EDX89069.1| recombination protein RecR [Alcanivorax sp. DG881]
Length = 200
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI +PG GPRSA+R L+ + + L +A+ + V C C N
Sbjct: 7 VDQLINAFTCLPGVGPRSAQRMAYALLDRGRESGRRLGDALHAAMDGVQHCQRCRNYAEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RDAS++ +V D+ A E+S Y VL G LSPLD +GP ++G+
Sbjct: 67 ELCPVCDDPRRDASLVCIVATPGDVLAFEQSGEYRGQYFVLMGELSPLDGVGPRELGLDV 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ +I ELI A T+EG+ TAHY++D + V ++R+A G+PMG EL+++D
Sbjct: 127 LEQRLNEGQISELILATGTTVEGEATAHYVLDLAQDAGVGVSRIAQGVPMGGELEFVDGA 186
Query: 190 TIFEAIRSR 198
T+ +A+R R
Sbjct: 187 TLAQALRGR 195
>gi|322388817|ref|ZP_08062414.1| recombination protein R [Streptococcus infantis ATCC 700779]
gi|321140436|gb|EFX35944.1| recombination protein R [Streptococcus infantis ATCC 700779]
Length = 198
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYISRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|288918921|ref|ZP_06413264.1| recombination protein RecR [Frankia sp. EUN1f]
gi|288349673|gb|EFC83907.1| recombination protein RecR [Frankia sp. EUN1f]
Length = 199
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++++I L ++PG GP+SA+R HL+ + L A+ + KV C C NV +
Sbjct: 6 VQDVIDELGQLPGIGPKSAQRIAFHLLAADPADVRRLVSALTELKEKVQFCRTCFNVAQS 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I+
Sbjct: 66 ELCRICVDPRRDQTSICVVEESKDVVAIERTREFRGRYHVLGGAINPIGGVGPDDLHIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A EG+ TA Y+ ++ + + +TRLA G+PMG +L++ D+
Sbjct: 126 LIARLADGVVTEIILATDPNTEGEVTASYLARQIAPMGLTVTRLASGLPMGGDLEWADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R ++
Sbjct: 186 TLGRAFEGRRIV 197
>gi|296876859|ref|ZP_06900907.1| recombination protein R [Streptococcus parasanguinis ATCC 15912]
gi|312867073|ref|ZP_07727283.1| recombination protein RecR [Streptococcus parasanguinis F0405]
gi|296432361|gb|EFH18160.1| recombination protein R [Streptococcus parasanguinis ATCC 15912]
gi|311097202|gb|EFQ55436.1| recombination protein RecR [Streptococcus parasanguinis F0405]
Length = 198
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + N ++ CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLNAKRELGYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D+ RD S+I+VVED D+ A+E + + YHVL G +SP++ +GP+DI ++S
Sbjct: 67 ETCEICRDETRDPSLILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LISRLMDGTVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|187928131|ref|YP_001898618.1| recombination protein RecR [Ralstonia pickettii 12J]
gi|187725021|gb|ACD26186.1| recombination protein RecR [Ralstonia pickettii 12J]
Length = 206
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LA+A++ + CS C
Sbjct: 7 TPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQEVCETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K TRLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|88808903|ref|ZP_01124412.1| recombination protein RecR [Synechococcus sp. WH 7805]
gi|88786845|gb|EAR18003.1| recombination protein RecR [Synechococcus sp. WH 7805]
Length = 182
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E+ + A A+ +V C C ++ C IC + +
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEEQIHSFANALLAARTEVGQCQTCHHLSAEPICEICRNPE 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R I VV D DL ALER++ + YHVLGG +SP+D IGP+ + I SL++R+
Sbjct: 61 RSNGQICVVADSRDLLALERTREFSGHYHVLGGLISPMDGIGPDLLQISSLVKRVAASNT 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
E+I A++ ++EG TT+ Y+ LK ++R+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 EEVILALTPSVEGDTTSLYVARLLKPF-TTVSRIAYGLPVGSELEYADEVTLSRALEGR 178
>gi|313894384|ref|ZP_07827949.1| recombination protein RecR [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441208|gb|EFR59635.1| recombination protein RecR [Veillonella sp. oral taxon 158 str.
F0412]
Length = 198
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 5 LERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSAQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++
Sbjct: 65 DPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+
Sbjct: 125 LIARLRDGIVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYADEL 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLGGAVVNR 193
>gi|293400032|ref|ZP_06644178.1| recombination protein RecR [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306432|gb|EFE47675.1| recombination protein RecR [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 196
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+ E L++ ++PG G ++A R ++ E+ L +++A++ + + C +CGN+
Sbjct: 4 KKFEALVESFRKLPGVGMKTAERYAFQTLEWDEETLNGFIQSLADMKDGLKKCEVCGNLA 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D R +I VV+ D+ A+E++K +YHVL G +S I PEDI I
Sbjct: 64 EGDLCDICKDTTRQRDIICVVQSPKDVIAMEKTKEYAGVYHVLNGVISTAKGILPEDINI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL+ RI+ + +E+I A + T+EG+TTA Y+ L+ DV +TR+A+G+PMG LDY D
Sbjct: 124 ESLLTRIQ-EDTKEIIIATNPTVEGETTALYLSKLLESYDVTVTRIAHGLPMGGHLDYAD 182
Query: 188 DGTIFEAIRSR 198
+ T+ +AI R
Sbjct: 183 ELTLIKAIEGR 193
>gi|329770460|ref|ZP_08261839.1| recombination protein recR [Gemella sanguinis M325]
gi|328836315|gb|EGF85981.1| recombination protein recR [Gemella sanguinis M325]
Length = 198
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I +LI + +PG G ++A R H +K + + A+++ + K+ C +C +
Sbjct: 5 KPILDLIDSYSLLPGIGRKTAIRLAFHTLKMNDNDINNFAKSLVELKEKLTNCEVCHRLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T C IC D RD S I VV + DL A+E + +YHVL G +SP+D IGP DI I
Sbjct: 65 ETSVCDICTDNSRDKSTICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDINI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL ER + ++E+I A +++ EG+ TA +I LK D+K+TR+A GI GS+++Y+D
Sbjct: 125 KSLFERAQDPIVKEIILATNSSPEGEGTASFISKYLKNTDIKVTRIAQGISFGSDIEYVD 184
Query: 188 DGTIFEAIRSR 198
+ T+ AI R
Sbjct: 185 EVTLSRAISGR 195
>gi|269798690|ref|YP_003312590.1| recombination protein RecR [Veillonella parvula DSM 2008]
gi|269095319|gb|ACZ25310.1| recombination protein RecR [Veillonella parvula DSM 2008]
Length = 198
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 5 LERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSAQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++
Sbjct: 65 DPCEFCSNPNRDHTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+
Sbjct: 125 LIARLRDGVVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYADEL 184
Query: 190 TIFEAIRSR 198
T+ A+ +R
Sbjct: 185 TLGGAVVNR 193
>gi|322435539|ref|YP_004217751.1| recombination protein RecR [Acidobacterium sp. MP5ACTX9]
gi|321163266|gb|ADW68971.1| recombination protein RecR [Acidobacterium sp. MP5ACTX9]
Length = 200
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 119/188 (63%), Gaps = 4/188 (2%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L ++PG G ++A+R H+++ + LA+A+ I + LCS+C N+ DPC
Sbjct: 12 LIDELRKLPGIGTKTAQRLAFHVLRSPGEDADALADAIREIKKHLRLCSVCNNITDVDPC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C + R +I VVE+ ++ +ER+++ N +YHVL G+LSP+ +GPE + I++L+
Sbjct: 72 HYCSNPVRSHRLICVVEEPTNIATVERTRSYNGVYHVLHGTLSPIGGVGPEQLRIRNLLT 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIPMGSELDYLDDGT 190
R+E + E+I A S TIEG+ TA YI +L+ + VK+TR+A G+P GS+++Y D+ T
Sbjct: 132 RLE--DVDEVILATSPTIEGEATAGYIAGELRRVKSGVKVTRIATGVPAGSDIEYADEVT 189
Query: 191 IFEAIRSR 198
+ A+ R
Sbjct: 190 MTRAMEGR 197
>gi|149927018|ref|ZP_01915276.1| recombination protein RecR [Limnobacter sp. MED105]
gi|149824239|gb|EDM83459.1| recombination protein RecR [Limnobacter sp. MED105]
Length = 211
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 116/190 (61%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+L++ L R+PG GP+SA+R HL++ Q L E++ ++ CS+C N D
Sbjct: 17 DLVQALKRLPGVGPKSAQRLAFHLLQNDRQAATALGESLLKAVAEIRHCSMCNNFCHADV 76
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C+IC D +R+ ++ VVE ADL A+E ++ Y+VL G SPLD + PE + L
Sbjct: 77 CSICSDTRRNPGLLCVVETPADLAAIEATQTYRGYYYVLMGRASPLDGVRPESLDWPKLS 136
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R++ +++E+I A + T EG+ TA ++ D+++ + +K++RLA G+P+G EL+Y D T+
Sbjct: 137 QRLDDSEVKEVILATNFTNEGEATAVFLTDRIRRMALKVSRLARGVPIGGELEYTDPSTV 196
Query: 192 FEAIRSRTVL 201
A+ R L
Sbjct: 197 ARALLDRRQL 206
>gi|124516359|gb|EAY57867.1| Recombination protein RecR [Leptospirillum rubarum]
Length = 214
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+LI+ L +PG G ++A R HL+K E L+ ++ + + LC C N+
Sbjct: 19 FHHLIESLRTLPGIGIKTATRLAFHLLKAPEAEALQLSREISGLREALVLCPQCQNIMDR 78
Query: 70 DP----CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC D RD ++VVED+ L+++ER+ YHVL G LSPL+ IGPE +
Sbjct: 79 DSRLSCCTICSDPARDPGTVMVVEDIQTLYSIERTGEFRGRYHVLLGRLSPLEGIGPEAL 138
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L++R +I E+I A S T+EG++TA Y+ K + VK++R+A+GIP+G EL++
Sbjct: 139 RVRELLDRTGTGEIHEMILATSPTVEGESTALYLARLFKPLGVKVSRIAFGIPVGLELEF 198
Query: 186 LDDGTIFEAIRSR 198
+DD T+ ++ +R
Sbjct: 199 VDDITLIRSVEAR 211
>gi|71275383|ref|ZP_00651669.1| RecR protein [Xylella fastidiosa Dixon]
gi|71898555|ref|ZP_00680726.1| RecR protein [Xylella fastidiosa Ann-1]
gi|170730360|ref|YP_001775793.1| recombination protein RecR [Xylella fastidiosa M12]
gi|71163683|gb|EAO13399.1| RecR protein [Xylella fastidiosa Dixon]
gi|71731679|gb|EAO33739.1| RecR protein [Xylella fastidiosa Ann-1]
gi|167965153|gb|ACA12163.1| recombination protein RecR [Xylella fastidiosa M12]
Length = 198
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C + T
Sbjct: 6 LEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP ++G+
Sbjct: 66 KICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHELGLDH 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+YLD G
Sbjct: 126 LGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELEYLDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +RT
Sbjct: 186 TLSHAFGTRT 195
>gi|238917929|ref|YP_002931446.1| recombination protein RecR [Eubacterium eligens ATCC 27750]
gi|238873289|gb|ACR72999.1| recombination protein RecR [Eubacterium eligens ATCC 27750]
Length = 198
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I I LI+ L+R+PG G +SA+R H++ E + LA+ M + + C C
Sbjct: 3 IYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKECF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC DQ+RD I+VVE D+ A E++ +YHVL G++SP+ IGP D
Sbjct: 63 TLTDEELCPICRDQKRDHKTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGPAD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ L+ R++ + E+I A ++ +EG+TTA YI +K +K+TR+A G+P+G +L+
Sbjct: 123 IRLKELMVRLQ-GDVDEVIIATNSNLEGETTAMYISKMIKPTGIKVTRIASGVPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D+ T+ A+ RT L
Sbjct: 182 YIDEVTLLRALDGRTEL 198
>gi|227894600|ref|ZP_04012405.1| recombinational DNA repair protein [Lactobacillus ultunensis DSM
16047]
gi|227863591|gb|EEJ71012.1| recombinational DNA repair protein [Lactobacillus ultunensis DSM
16047]
Length = 185
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 115/184 (62%), Gaps = 1/184 (0%)
Query: 19 RIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQ 78
++PG G ++A R + + ++ + ++A+ + + C ICGN+ D C IC +
Sbjct: 2 KLPGIGEKTATRLAFYTMDMPQEDVEDFSKALIQVKKDIHQCPICGNITEKDVCDICSNP 61
Query: 79 QRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVK- 137
RD + I+VVE DL A E N LYHVL G LSP+D IGPE+I I+SLI R++
Sbjct: 62 NRDQTTIMVVEQPKDLMAFEEMGEYNGLYHVLHGVLSPMDGIGPEEINIKSLITRLQKHD 121
Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
+++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y + T+ A++
Sbjct: 122 EVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANSITLKRAVQG 181
Query: 198 RTVL 201
RT L
Sbjct: 182 RTAL 185
>gi|296166809|ref|ZP_06849227.1| recombination protein R [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897825|gb|EFG77413.1| recombination protein R [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 203
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAALGKVRDGVRFCEVCGNVSDN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 ERCRICSDPRRDGSLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ I E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDIAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|331265935|ref|YP_004325565.1| recombination protein RecR [Streptococcus oralis Uo5]
gi|326682607|emb|CBZ00224.1| recombination protein RecR [Streptococcus oralis Uo5]
Length = 198
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYISRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|289523017|ref|ZP_06439871.1| recombination protein RecR [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503560|gb|EFD24724.1| recombination protein RecR [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 205
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 119/197 (60%), Gaps = 4/197 (2%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K +E+LI++ R PG G +SARR L L+++ + LAE +A + + CS CGN+
Sbjct: 4 AKALEDLIRLFERFPGIGEKSARRMVLFLLQQPKSFSESLAECIAKCNSLLHPCSRCGNI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD--RIGPED 124
DPC+IC D RD S I +VE V DL +E++ N LY VLG SPLD I P+
Sbjct: 64 TDEDPCSICCDPFRDKSTICIVESVEDLITIEQAGIYNGLYFVLGSLYSPLDDEEIAPQI 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
++ L++R+ ++++E+I A S +EG+ T + I ++ + V ++RL+YG+P+G +
Sbjct: 124 --LERLLKRVSEEEVKEVILAFSPKVEGELTMNLISKIMEPLPVTVSRLSYGLPVGGSVS 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D T+ A+ +RT +
Sbjct: 182 FADRTTLHAALEARTYI 198
>gi|71900521|ref|ZP_00682650.1| RecR protein [Xylella fastidiosa Ann-1]
gi|71729697|gb|EAO31799.1| RecR protein [Xylella fastidiosa Ann-1]
Length = 198
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 113/190 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI +PG G ++A+R H+++++ + LA+ + K+ C+ C + T
Sbjct: 6 LEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLGRAIEKIGHCTECRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP ++G+
Sbjct: 66 KICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHELGLDH 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+YLD G
Sbjct: 126 LGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELEYLDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +RT
Sbjct: 186 TLSHAFGTRT 195
>gi|21241866|ref|NP_641448.1| recombination protein RecR [Xanthomonas axonopodis pv. citri str.
306]
gi|294627934|ref|ZP_06706513.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666541|ref|ZP_06731782.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|24212230|sp|Q8PNG0|RECR_XANAC RecName: Full=Recombination protein recR
gi|21107249|gb|AAM35984.1| recombination protein RecR [Xanthomonas axonopodis pv. citri str.
306]
gi|292597848|gb|EFF42006.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603685|gb|EFF47095.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 197
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 112/190 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA A+ + KV C C + +
Sbjct: 5 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRDFTES 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G+
Sbjct: 65 EICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|303258601|ref|ZP_07344581.1| recombination protein RecR [Streptococcus pneumoniae SP-BS293]
gi|303262688|ref|ZP_07348628.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS292]
gi|303263628|ref|ZP_07349550.1| recombination protein RecR [Streptococcus pneumoniae BS397]
gi|303266389|ref|ZP_07352278.1| recombination protein RecR [Streptococcus pneumoniae BS457]
gi|303268262|ref|ZP_07354060.1| recombination protein RecR [Streptococcus pneumoniae BS458]
gi|302636244|gb|EFL66739.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS292]
gi|302640102|gb|EFL70557.1| recombination protein RecR [Streptococcus pneumoniae SP-BS293]
gi|302642213|gb|EFL72562.1| recombination protein RecR [Streptococcus pneumoniae BS458]
gi|302644089|gb|EFL74347.1| recombination protein RecR [Streptococcus pneumoniae BS457]
gi|302646666|gb|EFL76891.1| recombination protein RecR [Streptococcus pneumoniae BS397]
Length = 198
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDSTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|225575491|ref|ZP_03784101.1| hypothetical protein RUMHYD_03581 [Blautia hydrogenotrophica DSM
10507]
gi|225037288|gb|EEG47534.1| hypothetical protein RUMHYD_03581 [Blautia hydrogenotrophica DSM
10507]
Length = 201
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L+ +PG G +SA+R H++ + L +A+ + V C C +
Sbjct: 10 ISRLIEQLSSLPGIGNKSAQRLAFHIMNMPGDQVEQLVQAIHDAKEHVQYCKCCYTLTDK 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + +RD S I+VVE+ DL A E++ +YHVL G++SP+ IGP+DI ++
Sbjct: 70 ELCPICGNPKRDHSTIMVVENTRDLAAYEKTGKFEGVYHVLHGAISPMLGIGPDDIKLKE 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ ++++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 130 LMQRLQSEEVKEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDEV 189
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 190 TLLRALEGRVEL 201
>gi|329767044|ref|ZP_08258572.1| recombination protein recR [Gemella haemolysans M341]
gi|328837769|gb|EGF87394.1| recombination protein recR [Gemella haemolysans M341]
Length = 198
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 117/194 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I +LI + +PG G ++A R H +K + + A+++ ++ K+ C +CG +
Sbjct: 5 KPILDLIDSYSLLPGIGKKTAVRLAFHTLKMHDDDIKNFADSLVHLKEKLTNCEVCGRLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D RD S+I VV + DL A+E + +YHVL G +SP+D IGP DI I
Sbjct: 65 EDHVCDICSDAGRDKSMICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDINI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL ER + + ++E+I A +++ EG+ TA +I LK D+++TR+A GI GS+++Y+D
Sbjct: 125 KSLFERAQDETVKEIILATNSSPEGEGTASFISRYLKNTDIRVTRIAQGISFGSDIEYVD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI R L
Sbjct: 185 EVTLSRAISGRIEL 198
>gi|83645395|ref|YP_433830.1| recombination protein RecR [Hahella chejuensis KCTC 2396]
gi|123533423|sp|Q2SIW9|RECR_HAHCH RecName: Full=Recombination protein recR
gi|83633438|gb|ABC29405.1| recombination protein RecR [Hahella chejuensis KCTC 2396]
Length = 201
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L++ L +PG G ++A R L+L+++ + LA A+++ +V CS C N
Sbjct: 9 IDQLVRCLRYLPGVGAKTATRMALNLLERDQGRAADLAIAISDALTRVKRCSRCQNFCEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC +RD V+ VVE D+ A+E++ + Y VL G LSP+D IGPEDIG+
Sbjct: 69 ELCSICESPKRDDRVLCVVESPTDVLAIEQTSDYSGRYFVLMGHLSPIDGIGPEDIGVDK 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + ++ + ELI A + T+EG+ TAH+I K +++ ++R+A+GIP+G EL +D G
Sbjct: 129 LKQLLQESAVSELILATNPTVEGEATAHFIAHIAKDLNIPVSRIAHGIPLGGELGMIDSG 188
Query: 190 TIFEAIRSR 198
T+ A++ R
Sbjct: 189 TLSHALQGR 197
>gi|302384620|ref|YP_003820442.1| recombination protein RecR [Clostridium saccharolyticum WM1]
gi|302195248|gb|ADL02819.1| recombination protein RecR [Clostridium saccharolyticum WM1]
Length = 198
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+R+PG G +SA+R H++ E+ + LA ++ V C C +
Sbjct: 7 QITRLIEELSRLPGIGSKSAQRLAFHIINMPEEQVAGLASSITEAKRNVRYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC ++R+ VI+VVED DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 QEMCPICRSEKRNHKVIMVVEDTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA YI +K +++TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPTGIRVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLLRALEGRVEL 198
>gi|254818509|ref|ZP_05223510.1| recombination protein RecR [Mycobacterium intracellulare ATCC
13950]
Length = 203
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCGNVSDN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S + VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 ERCRICADPRRDGSQVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ER++ I E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALAGRRAM 202
>gi|20139818|sp|Q9PCH1|RECR_XYLFA RecName: Full=Recombination protein recR
Length = 198
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C + T
Sbjct: 6 LEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP ++G+
Sbjct: 66 KICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHELGLDH 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+YLD G
Sbjct: 126 LGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELEYLDRG 185
Query: 190 TIFEAIRSRT 199
T+ A +RT
Sbjct: 186 TLSHAFGTRT 195
>gi|85857925|ref|YP_460127.1| recombination protein [Syntrophus aciditrophicus SB]
gi|123517947|sp|Q2LYF5|RECR_SYNAS RecName: Full=Recombination protein recR
gi|85721016|gb|ABC75959.1| recombination protein [Syntrophus aciditrophicus SB]
Length = 203
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L ++PG G ++A R +H+++ E LA+++ + +K+ C +C N
Sbjct: 8 IKHLISELGKLPGIGEKTATRLAMHILRAPEGDARALADSILEVRDKIRFCRVCYNFSEA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D RD+S I VVED L A+E S + + YHVL G LSPLD IGPE + ++
Sbjct: 68 ELCTVCRDSARDSSQICVVEDPDALMAIEDSGSYSGTYHVLHGVLSPLDGIGPEQLKLRE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ERI +RE+I A + + G +TA I + + V +TR+A G+PMGS+L Y+D
Sbjct: 128 LVERIRESGVREVILATNPNVSGDSTALLISRMIGPLAVTVTRIAQGVPMGSDLRYMDRM 187
Query: 190 TIFEAIRSR 198
T+ +++ R
Sbjct: 188 TLSKSLEFR 196
>gi|323140456|ref|ZP_08075384.1| recombination protein RecR [Phascolarctobacterium sp. YIT 12067]
gi|322415024|gb|EFY05815.1| recombination protein RecR [Phascolarctobacterium sp. YIT 12067]
Length = 199
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + NL + L R+PG G ++A R H++ + + LA A++ ++ CS C N+
Sbjct: 6 RPLANLYEQLRRLPGIGSKTAMRLAYHVIDMPAEDVKQLAAALSGAKEQIHYCSRCFNLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+D C IC D RD+ I VVE D+ A+ERS + LYHVL G LSPLD IGPE + I
Sbjct: 66 DSDVCEICRDSSRDSFTICVVEQPQDIAAMERSHGYHGLYHVLHGVLSPLDGIGPEKLRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ + + E+I A ++ +EG+ TA Y+ LK + + ++R+A+G+PMG +L+Y D
Sbjct: 126 RELLLRLQQESVSEIIIATNSDVEGEATATYLAQLLKPVGITVSRIAHGLPMGGDLEYAD 185
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +A+ +R +
Sbjct: 186 EITLSKALENRRTM 199
>gi|282857784|ref|ZP_06266993.1| recombination protein RecR [Pyramidobacter piscolens W5455]
gi|282584454|gb|EFB89813.1| recombination protein RecR [Pyramidobacter piscolens W5455]
Length = 201
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE+LI +L + PG G +SARR +++++ E LA ++ + ++ C CGN+ T
Sbjct: 7 IEHLISLLKKFPGVGEKSARRMAFYVLQEGEGFGTDLARSVGELNRRLTTCEKCGNLTET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL-DRIGPEDIGIQ 128
PC IC D RD S++ V E + DL ++E+S N LY VLG SLSPL DR + ++
Sbjct: 67 QPCPICSDPLRDRSLLCVTETIEDLVSIEQSGLFNGLYFVLGTSLSPLEDRESLPEGTVR 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
SL +R E IRE I A + IEG T + +++ L+ + VK +RLAYG+P+G +++ D
Sbjct: 127 SLRKRFEEYPIREAIIATNPRIEGDMTFYALLEALRDLPVKKSRLAYGLPVGGSIEFADR 186
Query: 189 GTIFEAIRSR 198
T+ A+ SR
Sbjct: 187 VTLHAALESR 196
>gi|266621801|ref|ZP_06114736.1| recombination protein RecR [Clostridium hathewayi DSM 13479]
gi|288866490|gb|EFC98788.1| recombination protein RecR [Clostridium hathewayi DSM 13479]
Length = 198
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+++PG G +SA+R H++ E+ + LA ++ + V C C +
Sbjct: 7 QITKLIEELSKLPGIGSKSAQRLAFHIINMPEESVTSLASSITEAKHNVHYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+ VI+VVED DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 QELCPICKSDKRNHKVIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPNDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA Y+ +K V++TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-GDVEEVIIATNSSLEGETTAMYLSKLIKPTGVRVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLLRALEGRVEL 198
>gi|196231422|ref|ZP_03130281.1| recombination protein RecR [Chthoniobacter flavus Ellin428]
gi|196224758|gb|EDY19269.1| recombination protein RecR [Chthoniobacter flavus Ellin428]
Length = 203
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 112/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI L R+PG GPRSA R L +++ ++ ++ + + + C CG T
Sbjct: 10 IQALIGELKRLPGIGPRSAERIALWMLQSRDARPLEVSRVIREVQESIHACPRCGFFTTD 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D RDA+ I VVE D+ LER+ YH LGG +SPLD +GPE++ I +
Sbjct: 70 TLCEICADTTRDAAQICVVEQPTDILPLERTGVFLGRYHALGGRISPLDHVGPEELRIDA 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI+ + E+I A+ + +EG+ TA+Y+ L+ + V +TRLA G+P G L+ D+
Sbjct: 130 LIERIKAEAPSEIILALGSDVEGEATANYLATLLRELPVTVTRLAQGLPAGGGLEQADEL 189
Query: 190 TIFEAIRSRTVL 201
T+ A+ RT +
Sbjct: 190 TLSRALAGRTAV 201
>gi|320094880|ref|ZP_08026618.1| recombination protein R [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978209|gb|EFW09814.1| recombination protein R [Actinomyces sp. oral taxon 178 str. F0338]
Length = 197
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI ++PG GP+SA+R +H+++ E + L +A+ + +V C ICGNV
Sbjct: 6 LQDLIDEFGQLPGIGPKSAQRMAIHVLEADEDDVARLVDAINAVRTRVRHCEICGNVTEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC D +RD + + VV++ D+ A+E ++ YHVLGG + P+ IGPE + I +
Sbjct: 66 PTCSICRDARRDPTKVCVVQEPKDIQAVEAARVFRGRYHVLGGVIDPIHGIGPEQLRIAA 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ +I E+I A + +EG+ TA Y+ L + ++ +RLA G+PMG++L+Y D
Sbjct: 126 LMKRLGEGEIAEVILATNPNVEGEATAAYLARMLSTMGIETSRLAMGLPMGADLEYADAV 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLGRALEGR 194
>gi|307822529|ref|ZP_07652760.1| recombination protein RecR [Methylobacter tundripaludum SV96]
gi|307736133|gb|EFO06979.1| recombination protein RecR [Methylobacter tundripaludum SV96]
Length = 215
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 113/187 (60%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI+ L +PG GP++A+R HL+++ LA+ + K+ CS C + +
Sbjct: 26 QLIQNLCCLPGVGPKTAQRMAFHLLQRDRNGANMLAQTLLQAIEKMRHCSQCRTLTEGEL 85
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ RD ++I +VE +D+W ++++ Y VL G LSPLD IGP+++G+ L
Sbjct: 86 CEICADKSRDDTLICIVESPSDVWIVDQATMFKGRYFVLHGRLSPLDGIGPDELGLDLLE 145
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+++ I+ELI A ++T+EG+ TA++I + + V +R+A+G+PMG EL++ D GT+
Sbjct: 146 QQLATGHIKELILATNSTVEGEATAYFISELARKHQVPASRIAHGVPMGGELEFTDSGTL 205
Query: 192 FEAIRSR 198
A R
Sbjct: 206 SHAFNGR 212
>gi|167748330|ref|ZP_02420457.1| hypothetical protein ANACAC_03074 [Anaerostipes caccae DSM 14662]
gi|167652322|gb|EDR96451.1| hypothetical protein ANACAC_03074 [Anaerostipes caccae DSM 14662]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L ++PG GP+SA R H++ + LAE++ + V C C +
Sbjct: 7 QITKLIEELGKLPGIGPKSAGRLAFHIINMPLDQVKHLAESILDAKENVHYCKECCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC +RD S I+VVE DL A E++ +YHVL G++SP+ IGP DI ++
Sbjct: 67 QDICPICSSSKRDHSTIMVVESTRDLMAYEKTGKYEGIYHVLHGAISPMLGIGPSDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + ELI A ++++EG+TTA YI +K +K++++A G+P+G +L+Y+D+
Sbjct: 127 ELMARLQ-GDVNELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTEL 198
>gi|330470587|ref|YP_004408330.1| recombination protein RecR [Verrucosispora maris AB-18-032]
gi|328813558|gb|AEB47730.1| recombination protein RecR [Verrucosispora maris AB-18-032]
Length = 197
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R +++ + LA A+ + V C+ C NV +
Sbjct: 6 IQDLIDELGRLPGVGPKSAQRIAFYVLSADPADVNRLAGALRKVKELVRFCTNCYNVAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +R VI VVE+ D+ A+ER+ YHVLGG+++PL+ IGP+++ I+
Sbjct: 66 DQCRICRDPRRSDEVICVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDNLRIRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+Y D+
Sbjct: 126 LMTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGISVTRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|317506737|ref|ZP_07964519.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974]
gi|316254956|gb|EFV14244.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974]
Length = 203
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R HLV + + L A+A I + V C ICGN+
Sbjct: 6 VQDLIDELSRLPGVGPKSAQRIAFHLVGSPKPEIDRLGSALAKIRDGVQFCDICGNIAAD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD S I VV D+ A+ER++ + YHVLGG+L+PL +GP+ + ++
Sbjct: 66 EICRICKDPRRDLSRICVVSQPKDVVAIERTREFHGRYHVLGGALNPLAGVGPDRLRVKE 125
Query: 130 LIER----IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ R ++ + E+I A EG+ TA Y+ L D+++TRLA G+PMG +L+
Sbjct: 126 LLTRLASAVDGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADEMTLGRALAGRRSL 202
>gi|322389126|ref|ZP_08062689.1| recombination protein R [Streptococcus parasanguinis ATCC 903]
gi|321144168|gb|EFX39583.1| recombination protein R [Streptococcus parasanguinis ATCC 903]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + N ++ CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLNAKRELGYCSICGNLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D+ RD S+I+VVED D+ A+E + + YHVL G +SP++ +GP+DI +++
Sbjct: 67 ETCEICRDETRDPSLILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDDINLKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LISRLMDGTVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|300312972|ref|YP_003777064.1| recombinational DNA repair protein [Herbaspirillum seropedicae
SmR1]
gi|300075757|gb|ADJ65156.1| rocombinational DNA repair protein [Herbaspirillum seropedicae
SmR1]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 108/186 (58%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L L R+PG GP++A+R HL++ L++++A + + C++C C
Sbjct: 10 LTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALCNTFTEQVVC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C D QRD + + VVE +D +E++ LY VL G LSPLD IGP DI ++ LI
Sbjct: 70 ETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPRDIHLEKLIT 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R + E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y+D GTI
Sbjct: 130 RATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIA 189
Query: 193 EAIRSR 198
A+ R
Sbjct: 190 RAMLDR 195
>gi|15805234|ref|NP_293922.1| recombination protein RecR [Deinococcus radiodurans R1]
gi|7388065|sp|Q9ZNA2|RECR_DEIRA RecName: Full=Recombination protein recR
gi|151568115|pdb|2V1C|A Chain A, Crystal Structure And Mutational Study Of Recor Provide
Insight Into Its Role In Dna Repair
gi|151568116|pdb|2V1C|B Chain B, Crystal Structure And Mutational Study Of Recor Provide
Insight Into Its Role In Dna Repair
gi|6457868|gb|AAF09785.1|AE001882_3 recR protein [Deinococcus radiodurans R1]
Length = 220
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 2/190 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N+ +
Sbjct: 9 SLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFNITDAEK 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + I+ L+
Sbjct: 69 CDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKLHIKPLL 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R V + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y D+ T+
Sbjct: 129 PR--VGQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEYTDEVTL 186
Query: 192 FEAIRSRTVL 201
A+ R +
Sbjct: 187 GRALTGRQTV 196
>gi|307127882|ref|YP_003879913.1| recombination protein RecR [Streptococcus pneumoniae 670-6B]
gi|307705391|ref|ZP_07642250.1| recombination protein RecR [Streptococcus mitis SK597]
gi|307707046|ref|ZP_07643843.1| recombination protein RecR [Streptococcus mitis SK321]
gi|322377429|ref|ZP_08051920.1| recombination protein RecR [Streptococcus sp. M334]
gi|306484944|gb|ADM91813.1| recombination protein RecR [Streptococcus pneumoniae 670-6B]
gi|307617572|gb|EFN96742.1| recombination protein RecR [Streptococcus mitis SK321]
gi|307621054|gb|EFO00132.1| recombination protein RecR [Streptococcus mitis SK597]
gi|321281629|gb|EFX58638.1| recombination protein RecR [Streptococcus sp. M334]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPSRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|306829918|ref|ZP_07463105.1| recombination protein R [Streptococcus mitis ATCC 6249]
gi|322375681|ref|ZP_08050193.1| recombination protein RecR [Streptococcus sp. C300]
gi|304427929|gb|EFM31022.1| recombination protein R [Streptococcus mitis ATCC 6249]
gi|321279389|gb|EFX56430.1| recombination protein RecR [Streptococcus sp. C300]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDNEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|49259537|pdb|1VDD|A Chain A, Crystal Structure Of Recombinational Repair Protein Recr
gi|49259538|pdb|1VDD|B Chain B, Crystal Structure Of Recombinational Repair Protein Recr
gi|49259539|pdb|1VDD|C Chain C, Crystal Structure Of Recombinational Repair Protein Recr
gi|49259540|pdb|1VDD|D Chain D, Crystal Structure Of Recombinational Repair Protein Recr
Length = 228
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 2/190 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N+ +
Sbjct: 9 SLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFNITDAEK 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + I+ L+
Sbjct: 69 CDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKLHIKPLL 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R V + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y D+ T+
Sbjct: 129 PR--VGQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEYTDEVTL 186
Query: 192 FEAIRSRTVL 201
A+ R +
Sbjct: 187 GRALTGRQTV 196
>gi|183222802|ref|YP_001840798.1| recombination protein RecR [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912834|ref|YP_001964389.1| recombination protein RecR [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777510|gb|ABZ95811.1| Recombinational DNA repair protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167781224|gb|ABZ99522.1| Recombination protein RecR [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 202
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ + + LI+ + +PG G +SA R H+++ + K+ C CG
Sbjct: 6 LSDPQFQKLIQAFSSLPGIGKKSATRIGFHILRMDPSTFQSWINHIEEAKTKLRFCDDCG 65
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+IC+ +RD ++ VVE D++ +E +K + YHVL G++SPLD IGPE
Sbjct: 66 GLTEDSICSICLSDRRDNGILCVVEQPEDIFFIENTKEYSGKYHVLNGAISPLDGIGPEQ 125
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+++ I+E++ A + T+EG TA Y+ +K +++KITR+A+GI +G L+
Sbjct: 126 LRIKQLMQRLDIGNIKEVLIATNPTLEGDATASYLSTVIKPMEIKITRIAHGITIGGTLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +AI+SR L
Sbjct: 186 YSDQYTLGKAIKSRLTL 202
>gi|284046732|ref|YP_003397072.1| recombination protein RecR [Conexibacter woesei DSM 14684]
gi|283950953|gb|ADB53697.1| recombination protein RecR [Conexibacter woesei DSM 14684]
Length = 212
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG G R+A+R HL++ E+ LAEA+ + ++ LC +C N+
Sbjct: 8 VQRLITELGRLPGIGGRTAQRLAFHLLRASEEDALALAEAIKEVKARIGLCEVCFNLSDG 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D++RDA ++ VVE+ +D+ +ER+ + YHVLGG+LSP+D I PED+ I
Sbjct: 68 PRCRICSDERRDAGLVCVVEEPSDIIPIERTHEFHGRYHVLGGALSPIDGIDPEDLRIAE 127
Query: 130 LIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGI 177
L R+ IRE++ A + T G+ TA +I L+ V +TRLA G+
Sbjct: 128 LYTRVTPPADAPQDEHPTPIREVVLATNPTTTGEATALHIAAHLREQAPQVTVTRLASGL 187
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G++L+Y D+ T+ A+ R L
Sbjct: 188 PVGADLEYADELTLGRALSGRRAL 211
>gi|168493573|ref|ZP_02717716.1| recombination protein RecR [Streptococcus pneumoniae CDC3059-06]
gi|270292367|ref|ZP_06198578.1| recombination protein RecR [Streptococcus sp. M143]
gi|293365896|ref|ZP_06612599.1| recombination protein R [Streptococcus oralis ATCC 35037]
gi|303255993|ref|ZP_07342021.1| recombination protein RecR [Streptococcus pneumoniae BS455]
gi|306824761|ref|ZP_07458105.1| recombination protein R [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|307702299|ref|ZP_07639257.1| recombination protein RecR [Streptococcus oralis ATCC 35037]
gi|307707462|ref|ZP_07643944.1| recombination protein RecR [Streptococcus mitis NCTC 12261]
gi|315613599|ref|ZP_07888506.1| recombination protein R [Streptococcus sanguinis ATCC 49296]
gi|183576463|gb|EDT96991.1| recombination protein RecR [Streptococcus pneumoniae CDC3059-06]
gi|270278346|gb|EFA24192.1| recombination protein RecR [Streptococcus sp. M143]
gi|291315574|gb|EFE56024.1| recombination protein R [Streptococcus oralis ATCC 35037]
gi|302597052|gb|EFL64170.1| recombination protein RecR [Streptococcus pneumoniae BS455]
gi|304432972|gb|EFM35944.1| recombination protein R [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|307616414|gb|EFN95605.1| recombination protein RecR [Streptococcus mitis NCTC 12261]
gi|307624102|gb|EFO03081.1| recombination protein RecR [Streptococcus oralis ATCC 35037]
gi|315314290|gb|EFU62335.1| recombination protein R [Streptococcus sanguinis ATCC 49296]
gi|327389858|gb|EGE88203.1| recombination protein RecR [Streptococcus pneumoniae GA04375]
gi|332072840|gb|EGI83321.1| recombination protein RecR [Streptococcus pneumoniae GA17545]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|291613734|ref|YP_003523891.1| recombination protein RecR [Sideroxydans lithotrophicus ES-1]
gi|291583846|gb|ADE11504.1| recombination protein RecR [Sideroxydans lithotrophicus ES-1]
Length = 199
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E LIK L +PG GP+SA+R HL+++ Q LA ++ + V CS C N
Sbjct: 3 TPSSLEELIKALRCLPGVGPKSAQRMAYHLLQRDRQGALHLARSLDQAVSSVRHCSKCNN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C +C Q+R+ ++ VVE ADL +E+++ +Y VL G LSPLD +G +D+
Sbjct: 63 FSEEDVCPMCRSQRRETDMLCVVEMPADLLMMEQAQCYRGMYFVLMGRLSPLDGLGAKDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L++R E+I A + TIEG+ TAHY+ L+ +K++R+A G+P+G EL++
Sbjct: 123 PLERLLKRARELSC-EVILATNFTIEGEATAHYLATLLRAQGLKVSRIARGLPVGGELEH 181
Query: 186 LDDGTIFEAIRSR 198
+D GT+ +A+ R
Sbjct: 182 VDSGTLAQAVLER 194
>gi|307151592|ref|YP_003886976.1| recombination protein RecR [Cyanothece sp. PCC 7822]
gi|306981820|gb|ADN13701.1| recombination protein RecR [Cyanothece sp. PCC 7822]
Length = 185
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP++A+R LH++K+ E+ + LA+A+ +V LC +C ++ C IC
Sbjct: 1 MQRLPGVGPKTAQRLALHILKRPEEEVNTLAKAIIEAKKQVGLCQVCFHLSAESVCEICR 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ R+ ++I VV D D+ ALE+++ YHVLGG +SP+D IGPE + I +L+ R+
Sbjct: 61 NPNRNNNIICVVADSRDVIALEKTREYGGKYHVLGGVISPMDGIGPEQLNISALVRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+K++E+I AIS ++EG+TT Y+ LK + +TR+A+G+PMG +L+Y D+ T+ A+
Sbjct: 121 QKVQEVILAISPSVEGETTTLYVGQLLKPFTL-VTRIAFGLPMGGDLEYADEVTLARALE 179
Query: 197 SR 198
R
Sbjct: 180 GR 181
>gi|167767542|ref|ZP_02439595.1| hypothetical protein CLOSS21_02061 [Clostridium sp. SS2/1]
gi|317498611|ref|ZP_07956904.1| recombination protein RecR [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710834|gb|EDS21413.1| hypothetical protein CLOSS21_02061 [Clostridium sp. SS2/1]
gi|291558498|emb|CBL37298.1| recombination protein RecR [butyrate-producing bacterium SSC/2]
gi|316894098|gb|EFV16287.1| recombination protein RecR [Lachnospiraceae bacterium 5_1_63FAA]
Length = 198
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ L ++PG GP+SA R H++ + + L++ + + V C C +
Sbjct: 6 NQITQLIEELGKLPGIGPKSAGRLAFHIINMPQDQVQKLSDTIISAKTNVHYCKECCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +RD S I+VVE+ DL A E++ +YHVL G++SP+ IGP+DI +
Sbjct: 66 DNEICPICASDKRDHSTIMVVENTRDLMAYEKTGKYEGVYHVLHGAISPMLGIGPDDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ ++ELI A ++++EG+TTA YI +K +K++++A G+P+G +L+Y+D
Sbjct: 126 KELMARLQ-GDVKELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRT 199
+ T+ A+ RT
Sbjct: 185 EVTLLRALEGRT 196
>gi|322392709|ref|ZP_08066169.1| recombination protein R [Streptococcus peroris ATCC 700780]
gi|321144701|gb|EFX40102.1| recombination protein R [Streptococcus peroris ATCC 700780]
Length = 198
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICGRLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|332671907|ref|YP_004454915.1| recombination protein RecR [Cellulomonas fimi ATCC 484]
gi|332340945|gb|AEE47528.1| recombination protein RecR [Cellulomonas fimi ATCC 484]
Length = 199
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H++ + L++A+ + +V C +CGNV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHILAADPADVRRLSDALVEVKRRVRFCEVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D +R + + VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D+ I
Sbjct: 66 DQCRICRDPRRSPATLCVVEEPKDVVAIERTREFRGRYHVLGGAINPIAGVGPDDLRIAQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A +EG+ TA Y+ L + + ++RLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGVVTEVILATDPNVEGEATATYLARLLVPMGLTVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|226303880|ref|YP_002763838.1| recombination protein RecR [Rhodococcus erythropolis PR4]
gi|229492582|ref|ZP_04386385.1| recombination protein RecR [Rhodococcus erythropolis SK121]
gi|226182995|dbj|BAH31099.1| recombination protein RecR [Rhodococcus erythropolis PR4]
gi|229320568|gb|EEN86386.1| recombination protein RecR [Rhodococcus erythropolis SK121]
Length = 206
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L A+ I + V C++CG V
Sbjct: 6 VQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRIRDGVQFCTVCGTVSDQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+L+PL IGP+ + I+
Sbjct: 66 EKCRICADARRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALNPLSGIGPDQLRIRE 125
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ RI ++ + E+I A EG+ TA Y++ ++ I + ++RLA G+PMG +L+
Sbjct: 126 LLARIANQEDGVDVSEVIIATDPNTEGEATATYLVRMMRDIPGLTVSRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADELTLGRALSGRREL 202
>gi|320106729|ref|YP_004182319.1| recombination protein RecR [Terriglobus saanensis SP1PR4]
gi|319925250|gb|ADV82325.1| recombination protein RecR [Terriglobus saanensis SP1PR4]
Length = 199
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L ++PG G +SA+R H+++ + L+ A+ N+ + LCS+C N+
Sbjct: 8 MSRLIDELRKLPGVGSKSAQRLAFHILRTSQTDADLLSAAILNLKATLHLCSVCNNITDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC C R I V+E+ ++ A+ERS+ N +YHVL G+LSP++ +GPED+ I +
Sbjct: 68 DPCTFCTSPTRSHRTICVLEEPTNIAAVERSRTYNGVYHVLHGTLSPVNGVGPEDLRIGN 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSELDYLD 187
L+ R+ + E+I A+S T EG+ TA Y+ ++ D++++R+A G+P GS+++Y D
Sbjct: 128 LLNRL--AEADEIILALSPTTEGEATATYLATEIHRTRRDLRVSRIATGVPAGSDIEYAD 185
Query: 188 DGTIFEAIRSR 198
+ T+ AI +R
Sbjct: 186 EITLTRAIENR 196
>gi|153854736|ref|ZP_01995970.1| hypothetical protein DORLON_01968 [Dorea longicatena DSM 13814]
gi|149752643|gb|EDM62574.1| hypothetical protein DORLON_01968 [Dorea longicatena DSM 13814]
Length = 198
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L+ +PG G +SA R HL+ + LA M + C C +
Sbjct: 6 NQMSKLIEELSCLPGIGAKSAARLAFHLIHMPVDDVKRLASTMVEARENIKYCKECYTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGPEDI +
Sbjct: 66 DQELCPICSNSNRDHQTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPEDIKL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LIER++ ++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D
Sbjct: 126 KELIERLQ-GDVKEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTEL 198
>gi|319441765|ref|ZP_07990921.1| recombination protein RecR [Corynebacterium variabile DSM 44702]
Length = 214
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 16/208 (7%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++++I +R+PG GP+SA+R HL++ + + LA A+ + V C IC N+ +
Sbjct: 6 LQDVIDEFSRLPGVGPKSAQRIAFHLLQAEPTDVERLAGALTRLQQGVHFCRICHNISSE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RDA+++ VVE+ D+ +ER+ YHVLGG+L PL+ IGP+++ + +
Sbjct: 66 DVCRICADSSRDATLVCVVEESKDIQVIERTGEYKGRYHVLGGALDPLNGIGPKELNVTA 125
Query: 130 LIERI---------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRL 173
L++RI + I E+I A EG+ TA Y+ LK + ++RL
Sbjct: 126 LVQRIGGRVDDVPAADGTLPDAPDISEVIIATDPNTEGEATASYLGRLLKDFPGLTVSRL 185
Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A GIPMG +L+++D+ T+ A RT L
Sbjct: 186 ASGIPMGGDLEFVDELTLSRAFEGRTPL 213
>gi|300933816|ref|ZP_07149072.1| recombination protein RecR [Corynebacterium resistens DSM 45100]
Length = 218
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 20/212 (9%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++++I +R+PG GP+SA+R LHL++ + + L A+ + + V C IC N+
Sbjct: 6 LQDVIDEFSRLPGIGPKSAQRIALHLMEVEAEDLKRFQAALGRLQDGVAFCRICHNISQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RD S+I VVE+ D+ +ER+ YHVLGG+L PL +GP+++ +
Sbjct: 66 DICRICADSSRDKSIICVVEESKDIQVIERTAEYRGRYHVLGGALDPLAGVGPKELNVTP 125
Query: 130 LIERI-------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVK 169
L++RI +I E+I A EG+ TA Y+ LK +K
Sbjct: 126 LVQRIGGVLNDVARPGEGDEVVYDPAPEIEEVIIATDPNTEGEATASYLGRLLKDFPGLK 185
Query: 170 ITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+TRLA GIPMG +L+++D+ T+ A RT L
Sbjct: 186 VTRLASGIPMGGDLEFVDELTLSRAFAGRTAL 217
>gi|57234634|ref|YP_181325.1| recombination protein RecR [Dehalococcoides ethenogenes 195]
gi|123618834|sp|Q3Z8X4|RECR_DEHE1 RecName: Full=Recombination protein recR
gi|57225082|gb|AAW40139.1| recombination protein RecR [Dehalococcoides ethenogenes 195]
Length = 204
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 116/193 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + LI L ++PG GP+SA+R +L++ E+ + L++ + +I N++ C IC N
Sbjct: 9 TAGAVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEEQVLTLSDTIRSIKNQISQCRICFN 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V ++ C IC + +R+A+ I VVE D+ ALE YHVL G++SP + I ++I
Sbjct: 69 VADSELCPICQNTKREANKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNI 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y
Sbjct: 129 RINELMSRLNDGQVDEVILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEY 188
Query: 186 LDDGTIFEAIRSR 198
DD T+ A+ R
Sbjct: 189 ADDVTLSRAMEGR 201
>gi|296130955|ref|YP_003638205.1| recombination protein RecR [Cellulomonas flavigena DSM 20109]
gi|296022770|gb|ADG76006.1| recombination protein RecR [Cellulomonas flavigena DSM 20109]
Length = 199
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 114/192 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++L+ L R+PG GP+SA+R H++ + LA+A+ + +V C +CGNV
Sbjct: 6 IQDLVDELGRLPGVGPKSAQRIAFHILAADPADVRRLADALTEVKARVQFCEVCGNVAQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +R + I VVE+ D+ A+ER++ YHVLGG+++P+ IGP+D+ I
Sbjct: 66 PQCRICRDPRRLPTTICVVEEAKDVVAIERTREFRGRYHVLGGAINPIAGIGPDDLRIAQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A +EG+ TA Y+ L + + ++RLA G+P+G +L+Y D+
Sbjct: 126 LMTRLADGTVTEVILATDPNVEGEATATYLARLLVPMGLTVSRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFEGRRRL 197
>gi|309390264|gb|ADO78144.1| DNA replication and repair protein RecR [Halanaerobium praevalens
DSM 2228]
Length = 199
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 119/194 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI L+++PG GP++ARR + +++ + + + LA+A+ ++ CS C ++
Sbjct: 6 KPMGKLIGELSKLPGIGPKTARRLSFYILGQPKTDVKNLADALLEAREQINYCSNCNHLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C C + R+ I VVE D+ A+E++ LYHVL G++SP+D IGP++I I
Sbjct: 66 EGETCTFCQSEARNRRTICVVESPRDVVAMEKTGEYKGLYHVLHGAISPMDGIGPDEIKI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SLI R++ + E+I A EG TA Y+ +K + VK+TR+A+GIP+G +L+Y D
Sbjct: 126 RSLIPRLKQDAVEEIIVATDPNAEGDATAMYLAKLIKPLGVKVTRIAHGIPVGGDLEYAD 185
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +A+ R L
Sbjct: 186 EVTLSKALEGRREL 199
>gi|260437832|ref|ZP_05791648.1| recombination protein RecR [Butyrivibrio crossotus DSM 2876]
gi|292809857|gb|EFF69062.1| recombination protein RecR [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G ++ LI+ L+ +PG G ++A+R H++ E+ LA+A+ + + + C C +
Sbjct: 5 GSQLSRLIEELSALPGVGAKTAQRLAFHIINMPEERADGLAKAIVDAKHNIRYCKTCQTL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D C IC + +R+ VI+VVE+V DL A E++ +YHVL G++SP+ IGP DI
Sbjct: 65 TDRDECNICGNPERNHKVIMVVENVRDLVAYEKTGKYKGVYHVLHGAISPMLGIGPNDIK 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ R++ + E+I A ++++EG+ TA Y+ +K +K+TR+A G+P+G +L+Y+
Sbjct: 125 IKELLVRLQ-GDVDEVIIATNSSLEGEATAMYLSKLIKPTGIKVTRIASGVPVGGDLEYI 183
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ RT L
Sbjct: 184 DEVTLLRALEGRTEL 198
>gi|296141675|ref|YP_003648918.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162]
gi|296029809|gb|ADG80579.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162]
Length = 215
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI LA++PG GPR A+R HL+ + + L A+ + + V C +CGNV
Sbjct: 6 VQELIDELAKLPGVGPRGAQRIAFHLLGAQPSEIDRLTHALTRVRDDVRYCEVCGNVSAD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RDAS I VVE+ D+ A+ER++ LYHVLGG+L+P+ IGP+ + I+
Sbjct: 66 VRCRICSDSRRDASKICVVEEAKDVQAVERTREYRGLYHVLGGALNPIKAIGPDKLRIRE 125
Query: 130 LIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGSELD 184
L+ R+ ++ E+I A EG+ TA +++ LK + +TR A G+PMG+EL+
Sbjct: 126 LLVRLGAAVDGVEVDEVIIATDPNTEGEATAAFLVRMLKDFPGLTVTRPAAGLPMGAELE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADELTLGRAMSGRRSL 202
>gi|168488614|ref|ZP_02712813.1| recombination protein RecR [Streptococcus pneumoniae SP195]
gi|221232409|ref|YP_002511562.1| recombination protein RecR [Streptococcus pneumoniae ATCC 700669]
gi|225855102|ref|YP_002736614.1| recombination protein RecR [Streptococcus pneumoniae JJA]
gi|225859427|ref|YP_002740937.1| recombination protein RecR [Streptococcus pneumoniae 70585]
gi|254790785|sp|C1C8R1|RECR_STRP7 RecName: Full=Recombination protein recR
gi|254790786|sp|B8ZM67|RECR_STRPJ RecName: Full=Recombination protein recR
gi|254790788|sp|C1CFP3|RECR_STRZJ RecName: Full=Recombination protein recR
gi|6634558|emb|CAB64458.1| recombination protein [Streptococcus pneumoniae]
gi|6634563|emb|CAB64462.1| recombination protein [Streptococcus pneumoniae]
gi|6634568|emb|CAB64466.1| recombination protein [Streptococcus pneumoniae]
gi|183572659|gb|EDT93187.1| recombination protein RecR [Streptococcus pneumoniae SP195]
gi|220674870|emb|CAR69445.1| recombination protein RecR [Streptococcus pneumoniae ATCC 700669]
gi|225720091|gb|ACO15945.1| recombination protein RecR [Streptococcus pneumoniae 70585]
gi|225722656|gb|ACO18509.1| recombination protein RecR [Streptococcus pneumoniae JJA]
gi|332072501|gb|EGI82984.1| recombination protein RecR [Streptococcus pneumoniae GA17570]
gi|332199701|gb|EGJ13776.1| recombination protein RecR [Streptococcus pneumoniae GA41317]
Length = 198
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDSTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|192359825|ref|YP_001982900.1| recombination protein RecR [Cellvibrio japonicus Ueda107]
gi|190685990|gb|ACE83668.1| recombination protein RecR [Cellvibrio japonicus Ueda107]
Length = 197
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L +PG GP+SA+R LHL+++ LA ++ V C C +
Sbjct: 6 IDELMSSLRCLPGVGPKSAQRMALHLLERDRVGAERLARSLHKAIEGVGRCRRCRTLTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +++RD ++ VVE AD+ A+E++ Y VL G LSP+D +GPEDIGI
Sbjct: 66 ELCGICRNERRDPGLLCVVETPADVLAIEQAGTYQGKYFVLLGHLSPIDGVGPEDIGIDQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++ ++ + + E+I A + T+EG+ TA YI ++ K ++V ++R+A+G+P+G EL+++D G
Sbjct: 126 LLQLLQQEPVTEVILATNPTVEGEATAFYISERAKNLNVTVSRIAHGVPLGGELEFIDGG 185
Query: 190 TIFEAIRSRTVL 201
T+ A SR L
Sbjct: 186 TLAHAFSSRRSL 197
>gi|302669598|ref|YP_003829558.1| recombinational DNA repair protein RecR [Butyrivibrio
proteoclasticus B316]
gi|302394071|gb|ADL32976.1| recombinational DNA repair protein RecR [Butyrivibrio
proteoclasticus B316]
Length = 199
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 117/193 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI L+ +PG G +SA+R +L+ + + LA+++ N V C C +
Sbjct: 7 HINKLIDELSSLPGIGGKSAQRLAFYLIGLPKDRVHKLADSIVNARENVHYCKECCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + RD I+VVE+ DL A E++ +YHVL G++SP+ +GP DI +
Sbjct: 67 DDICPICSNPGRDHKTIMVVENARDLAAYEKTGKFEGVYHVLHGAISPMLGVGPGDIRLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ ++ E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQTHEVEEVIVATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 187 VTLLRALEGRTEL 199
>gi|3925822|dbj|BAA34648.1| RecR protein [Deinococcus radiodurans]
Length = 220
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 2/190 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N+ +
Sbjct: 9 SLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFNITDAEK 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + I+ L+
Sbjct: 69 CDVCADPSRDQRTICVVEEHGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKLHIKPLL 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R V + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y D+ T+
Sbjct: 129 PR--VGQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEYTDEVTL 186
Query: 192 FEAIRSRTVL 201
A+ R +
Sbjct: 187 GRALTGRQTV 196
>gi|269123196|ref|YP_003305773.1| recombination protein RecR [Streptobacillus moniliformis DSM 12112]
gi|268314522|gb|ACZ00896.1| recombination protein RecR [Streptobacillus moniliformis DSM 12112]
Length = 195
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 118/194 (60%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ L+ +L+ + G G ++A R L+ K E + L + + Y + CS+C N+
Sbjct: 2 KKIDELVLVLSNLKGIGKKNATRIAFDLLSKDEDDINYLLYTIKSAYENIKPCSVCHNLT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC R+ +VI VVED D++A ++ + N LYHVLGG + PL+ IG +++ I
Sbjct: 62 DLGICDICSSTNRNKNVICVVEDTRDIYAFNKASSYNGLYHVLGGKIDPLNGIGIDELNI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ RI+ + I E+I A++ +EG+TT Y+ L ++VK++R+A GIP+G ++Y D
Sbjct: 122 DSLLSRID-ENINEVILALNPDLEGETTILYLTKLLSNMNVKVSRIASGIPIGGNIEYSD 180
Query: 188 DGTIFEAIRSRTVL 201
T+ +++ R ++
Sbjct: 181 SATLIKSLEGRVII 194
>gi|88705064|ref|ZP_01102776.1| Recombination protein recR [Congregibacter litoralis KT71]
gi|88700759|gb|EAQ97866.1| Recombination protein recR [Congregibacter litoralis KT71]
Length = 202
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R LHL+++ + L+ ++A+ +V C C N+
Sbjct: 8 MDALIEALRCLPGVGPKSAQRMALHLLERNREGAATLSRSLADAVERVGRCQQCRNLAEA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RDAS++ +VE D+ A+E++ Y VL G LSP+D IGPE+IG+
Sbjct: 68 VLCGICADTRRDASLLCIVETPGDILAIEQAGGYRGRYFVLMGHLSPIDGIGPEEIGLPL 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +++E+I A + T+EG+ TA+YI L+ + +++R+A+G+P+G EL+Y+D
Sbjct: 128 LEALARDGEVQEVILATNPTVEGEATAYYITRMLEPLIPRMSRIAHGVPLGGELEYVDGS 187
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 188 TLAHAFSGR 196
>gi|325956091|ref|YP_004286701.1| recombination protein RecR [Lactobacillus acidophilus 30SC]
gi|325332656|gb|ADZ06564.1| recombination protein RecR [Lactobacillus acidophilus 30SC]
Length = 199
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI ++PG G ++A R + + ++ + A A+ + + C ICGN+
Sbjct: 7 IAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFARALIQVKKDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + RD + I+VVE D+ + E + LYHVL G LSP+D IGPE+I I+S
Sbjct: 67 DICDICSNPNRDQTTIMVVEQPKDVMSFEEMGEYSGLYHVLHGVLSPMDGIGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKHDEVKEVILALNSTSEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTTL 199
>gi|227494435|ref|ZP_03924751.1| recombination protein [Actinomyces coleocanis DSM 15436]
gi|226832169|gb|EEH64552.1| recombination protein [Actinomyces coleocanis DSM 15436]
Length = 196
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L +PG GP+SA+R H++ + LA A+ + KV C CGN+
Sbjct: 6 VQDLIDELGALPGVGPKSAQRIAFHILSADSADVMRLANALRVVKEKVRFCENCGNIAEA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD ++I VVE+ D+ +ER+ + LYHVLGG++ P+ +GPE + I+
Sbjct: 66 PTCRICQDPRRDTTLICVVEEAKDVEVIERTGSYRGLYHVLGGAIDPIKGLGPEQLRIRQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +RE+I A IEG+ TA Y+ L+ + V +RLA G+P+G +L+Y D+
Sbjct: 126 LLGRL--TNVREVIIATDPNIEGEATATYLARMLETMQVPASRLALGLPVGGDLEYADEI 183
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 184 TLGRAFEGRRLL 195
>gi|169834528|ref|YP_001695053.1| recombination protein RecR [Streptococcus pneumoniae Hungary19A-6]
gi|307709607|ref|ZP_07646060.1| recombination protein RecR [Streptococcus mitis SK564]
gi|238688352|sp|B1I734|RECR_STRPI RecName: Full=Recombination protein recR
gi|168997030|gb|ACA37642.1| recombination protein RecR [Streptococcus pneumoniae Hungary19A-6]
gi|307619643|gb|EFN98766.1| recombination protein RecR [Streptococcus mitis SK564]
Length = 198
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CS+CG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSVCGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|237746946|ref|ZP_04577426.1| recombinational DNA repair protein [Oxalobacter formigenes HOxBLS]
gi|229378297|gb|EEO28388.1| recombinational DNA repair protein [Oxalobacter formigenes HOxBLS]
Length = 198
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI+ L +PG GP+SA+R H+++ L+ A+++ + C+ C
Sbjct: 7 LQNLIQALRHLPGIGPKSAQRIAYHMLQHDRDGAAKLSLALSDAIANIRHCARCNTFSEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +RDAS++ V E AD +E++ Y VL GSLSPLD IGP++I
Sbjct: 67 EICEMCRDNERDASLLCVTETPADQIMIEQTLTFKGYYFVLMGSLSPLDGIGPKEICFDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R ++E++ A S EG+ TAHYI + LK ++++RLA G+P+G+EL+Y+D G
Sbjct: 127 LIRRATDGVVQEVVLATSFNNEGEATAHYISEMLKARGLRVSRLARGVPVGAELEYVDIG 186
Query: 190 TIFEAIRSR 198
TI A R
Sbjct: 187 TIARAFLDR 195
>gi|145592781|ref|YP_001157078.1| recombination protein RecR [Salinispora tropica CNB-440]
gi|145302118|gb|ABP52700.1| DNA replication and repair protein RecR [Salinispora tropica
CNB-440]
Length = 197
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R H++ + LA A+ + V C+ C NV +
Sbjct: 6 IQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLAGALRKVKELVRFCTSCYNVAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP+++ ++
Sbjct: 66 EQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDNLRVRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+Y D+
Sbjct: 126 LLTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGIAVTRLASGLPVGGDLEYADEI 185
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 186 TLGRAFEGR 194
>gi|315605706|ref|ZP_07880739.1| recombination protein R [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312661|gb|EFU60745.1| recombination protein R [Actinomyces sp. oral taxon 180 str. F0310]
Length = 197
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 113/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI ++PG GP+SA+R +H++ + + L EA+ + +V C +C N+
Sbjct: 6 LADLIDQFGQLPGIGPKSAQRMAMHVLDADPEEVARLVEAINAVRGRVRHCDVCANLTED 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C+IC D +RD S I VV++ D+ A+E ++ YHVLGG + P+ IGP+ + I S
Sbjct: 66 DQCSICRDVRRDPSQICVVQEPKDIQAIEGARVFRGRYHVLGGVIDPIHGIGPDQLNIAS 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + +EG+ TA Y+ L + V+ +RLA G+PMG +L+Y D
Sbjct: 126 LMSRLADGTVTEVILATNPNVEGEATAAYLARMLSTMGVETSRLAMGLPMGGDLEYADSV 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 TLGRALEGRRRL 197
>gi|325663667|ref|ZP_08152071.1| recombination protein recR [Lachnospiraceae bacterium 4_1_37FAA]
gi|331087181|ref|ZP_08336251.1| recombination protein recR [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470160|gb|EGC73393.1| recombination protein recR [Lachnospiraceae bacterium 4_1_37FAA]
gi|330408867|gb|EGG88328.1| recombination protein recR [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+R+PG G +SA R H++ + + LA + N V C+ C +
Sbjct: 7 QISKLIEELSRLPGIGAKSAGRLAFHIINMPKDQVERLASTLVEARNNVRYCAQCCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +RD I+VVE DL A E++ N +YHVL G++SP+ IGP DI ++
Sbjct: 67 KELCPICGSNKRDQRTIMVVETTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER++ + E+I A ++++EG+TTA Y+ +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMERLQ-GDVDEVIIATNSSLEGETTAMYLSKLIKPTGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTQL 198
>gi|227824619|ref|ZP_03989451.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905118|gb|EEH91036.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + L + L ++PG G +SA R + H++ K + LA A+ + ++V LC+ C N+
Sbjct: 5 KPLARLHEQLRKLPGIGSKSALRLSYHVLDMKRSDVEALAAALVAVKDQVHLCTSCFNLC 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D++RD +I VVE+ D+ A+ER+K +YHVL G LSPLD +GP+ + I
Sbjct: 65 EGTRCEICEDEKRDHGLICVVEEPQDVAAMERTKGFEGVYHVLHGVLSPLDGVGPDQLKI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ + E+I A ++ +EG+ TA Y+ ++ + +K++R+A+G+PMG +L+Y D
Sbjct: 125 RELMRRLQDGSVHEVILATNSDVEGEATAAYLASLIRPLGIKVSRIAHGLPMGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+++A+ +R L
Sbjct: 185 ELTLYKALENRREL 198
>gi|160878209|ref|YP_001557177.1| recombination protein RecR [Clostridium phytofermentans ISDg]
gi|189029358|sp|A9KQC9|RECR_CLOPH RecName: Full=Recombination protein recR
gi|160426875|gb|ABX40438.1| recombination protein RecR [Clostridium phytofermentans ISDg]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L R+PG G +SA+R H++ ++ + LA+ M + + V C +C +
Sbjct: 7 QISKLIEELGRLPGIGAKSAQRLAFHIINMPKEQVEHLAKTMLDARSNVKYCKVCQTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC ++RD VI+VVE+ DL A E++ + +YHVL G++SP+ IGP+DI ++
Sbjct: 67 KEICPICSSEKRDQKVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPQDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + E+I A ++++EG+ TA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMLRLQ-GDVDEVIIATNSSLEGEATAMYISKLIKPAGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLLRALDGRIQL 198
>gi|296118024|ref|ZP_06836606.1| recombination protein RecR [Corynebacterium ammoniagenes DSM 20306]
gi|295968910|gb|EFG82153.1| recombination protein RecR [Corynebacterium ammoniagenes DSM 20306]
Length = 218
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R H++ + + L+ A+ + + V C IC N+
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHVLHMDPEDIDRLSSALVAVRDGVTFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC++ QRD I VVE+ D+ +ER+ YHVLGG+L PL IGP+D+ I
Sbjct: 66 SVCRICVNSQRDRGTICVVEEPKDIQVIERTGEYQGRYHVLGGALDPLANIGPKDLNISQ 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI E + E+I A EG+ TA Y++ L+ D+
Sbjct: 126 LLQRIGGVLPDRELADSTKENPQYDETPDVTEVILATDPNTEGEATAAYLVRLLRDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITRLA G+P+G +L+++D+ T+ A++ R
Sbjct: 186 KITRLASGMPLGGDLEFVDELTLSRALQGR 215
>gi|315037612|ref|YP_004031180.1| recombination protein RecR [Lactobacillus amylovorus GRL 1112]
gi|312275745|gb|ADQ58385.1| recombination protein RecR [Lactobacillus amylovorus GRL 1112]
gi|327182906|gb|AEA31353.1| recombination protein RecR [Lactobacillus amylovorus GRL 1118]
Length = 199
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI ++PG G ++A R + + ++ + A A+ + + C ICGN+
Sbjct: 7 IAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFARALIQVKKDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + RD + I+VVE D+ + E + LYHVL G LSP+D IGPE+I I+S
Sbjct: 67 DICDICSNPNRDQTTIMVVEQPKDVMSFEEMGEYSGLYHVLHGVLSPMDGIGPEEINIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKHDEVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTTL 199
>gi|88812991|ref|ZP_01128234.1| recombination protein RecR [Nitrococcus mobilis Nb-231]
gi|88789769|gb|EAR20893.1| recombination protein RecR [Nitrococcus mobilis Nb-231]
Length = 200
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG GP+SA+R H++++ + LA +A KV C C +
Sbjct: 8 VSELIEALRCLPGVGPKSAQRMAFHILQRDREGGMRLARVLAEAVAKVGECRYCRILTEQ 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC +RD S + +VE+ AD++AL+++ + LY VL G LSPLD IGP ++G+
Sbjct: 68 ALCTICSSGKRDRSTLCIVENPADVYALDQATDYSGLYFVLKGRLSPLDGIGPAELGLDC 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R +IRE++ A ++T+EG+ TA +I + + ++R+AYG+P+G EL+Y+D G
Sbjct: 128 LEKRFCEGEIREIVLATNSTVEGEATAQFIAEMAYNNAIHVSRIAYGVPVGGELEYVDSG 187
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 188 TLSHAFAGR 196
>gi|225571142|ref|ZP_03780140.1| hypothetical protein CLOHYLEM_07230 [Clostridium hylemonae DSM
15053]
gi|225159973|gb|EEG72592.1| hypothetical protein CLOHYLEM_07230 [Clostridium hylemonae DSM
15053]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 117/192 (60%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ L+ +PG G +SA R HL+ + + LA+ M V CS C +
Sbjct: 6 NQISKLIEELSCLPGIGTKSASRLAFHLIHMPVEEVKRLADTMVEARENVRYCSECYTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC ++ RD I+VVE DL A E++ +YHVL G++SP+ IGPED+ +
Sbjct: 66 DQELCPICRNEARDHKTIMVVETTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPEDVKL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER+ K + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D
Sbjct: 126 KELMERLR-KDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRT 199
+ T+ A+ RT
Sbjct: 185 EVTLLRALEGRT 196
>gi|167759646|ref|ZP_02431773.1| hypothetical protein CLOSCI_02004 [Clostridium scindens ATCC 35704]
gi|167662772|gb|EDS06902.1| hypothetical protein CLOSCI_02004 [Clostridium scindens ATCC 35704]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ LI+ L+ +PG G +SA R HL+ + LA M V C+ C +
Sbjct: 7 QMSKLIEELSCLPGIGSKSAARLAFHLIHMPLDDVKRLASTMVEARENVRYCAQCYTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGPEDI ++
Sbjct: 67 QELCPICSNSSRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPEDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LIER++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELIERLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTQL 198
>gi|270307945|ref|YP_003330003.1| recombination protein [Dehalococcoides sp. VS]
gi|270153837|gb|ACZ61675.1| recombination protein [Dehalococcoides sp. VS]
Length = 204
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 116/193 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + LI L ++PG GP+SA+R +L++ E+ + L++ + +I N++ C IC N
Sbjct: 9 TAGAVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEEQVLALSDTIRSIKNQISQCRICFN 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V ++ C IC + +R+ + I VVE D+ ALE YHVL G++SP + I ++I
Sbjct: 69 VADSELCPICQNTKRETNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNI 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R++ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y
Sbjct: 129 RISELMSRLDNGQVDEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEY 188
Query: 186 LDDGTIFEAIRSR 198
DD T+ A+ R
Sbjct: 189 ADDVTLSRAMEGR 201
>gi|168483458|ref|ZP_02708410.1| recombination protein RecR [Streptococcus pneumoniae CDC1873-00]
gi|172043140|gb|EDT51186.1| recombination protein RecR [Streptococcus pneumoniae CDC1873-00]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYRGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|73748422|ref|YP_307661.1| recombination protein RecR [Dehalococcoides sp. CBDB1]
gi|147669202|ref|YP_001214020.1| DNA replication and repair protein RecR [Dehalococcoides sp. BAV1]
gi|289432469|ref|YP_003462342.1| recombination protein RecR [Dehalococcoides sp. GT]
gi|123619528|sp|Q3ZWX3|RECR_DEHSC RecName: Full=Recombination protein recR
gi|189029359|sp|A5FRM7|RECR_DEHSB RecName: Full=Recombination protein recR
gi|73660138|emb|CAI82745.1| recombination protein RecR [Dehalococcoides sp. CBDB1]
gi|146270150|gb|ABQ17142.1| DNA replication and repair protein RecR [Dehalococcoides sp. BAV1]
gi|288946189|gb|ADC73886.1| recombination protein RecR [Dehalococcoides sp. GT]
Length = 204
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 115/193 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + LI L ++PG GP+SA+R +L++ E + L++ + NI N++ C IC N
Sbjct: 9 TAGVVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEDQVISLSDTIRNIKNQISQCRICCN 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V ++ C IC + +R+ + I VVE D+ ALE YHVL G++SP + I ++I
Sbjct: 69 VADSELCPICQNTKRETNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNI 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R++ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y
Sbjct: 129 RINELMVRLDNGQVEEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEY 188
Query: 186 LDDGTIFEAIRSR 198
DD T+ A+ R
Sbjct: 189 ADDVTLSRAMEGR 201
>gi|15838408|ref|NP_299096.1| recombination protein RecR [Xylella fastidiosa 9a5c]
gi|9106887|gb|AAF84616.1|AE004002_6 recombination protein [Xylella fastidiosa 9a5c]
Length = 244
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C + T
Sbjct: 52 LEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECRDFSET 111
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP ++G+
Sbjct: 112 KICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHELGLDH 171
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+YLD G
Sbjct: 172 LGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELEYLDRG 231
Query: 190 TIFEAIRSRT 199
T+ A +RT
Sbjct: 232 TLSHAFGTRT 241
>gi|317472131|ref|ZP_07931463.1| recombination protein RecR [Anaerostipes sp. 3_2_56FAA]
gi|316900535|gb|EFV22517.1| recombination protein RecR [Anaerostipes sp. 3_2_56FAA]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L ++PG GP+SA R H++ + L+E++ + V C C +
Sbjct: 7 QITKLIEELGKLPGIGPKSAGRLAFHIINMPLDQVKHLSESILDAKENVHYCKECCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC +RD S I+VVE DL A E++ +YHVL G++SP+ IGP DI ++
Sbjct: 67 QDICPICSSSKRDHSTIMVVESTRDLMAYEKTGKYEGIYHVLHGAISPMLGIGPSDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ + ELI A ++++EG+TTA YI +K +K++++A G+P+G +L+Y+D+
Sbjct: 127 ELMARLQ-GDVNELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALEGRTEL 198
>gi|121533382|ref|ZP_01665210.1| recombination protein RecR [Thermosinus carboxydivorans Nor1]
gi|121307941|gb|EAX48855.1| recombination protein RecR [Thermosinus carboxydivorans Nor1]
Length = 171
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 34 HLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVAD 93
H+++ + LA+A+ + KV CS+C N+ DPC +C + RD +VI VVED D
Sbjct: 4 HVLEMDKDEAQALAQAILDAKEKVGYCSVCFNLTDCDPCQVCQAEGRDRTVICVVEDPRD 63
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
+ A+ER++ LYHVL G+LSPLD +GP+ + + L++R+ +RE+I A + +EG+
Sbjct: 64 VEAMERTREYRGLYHVLHGALSPLDGVGPDQLRLAELLQRLRQGDVREVIMATNPNVEGE 123
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
TA YI LK + VK+TR+A+G+P+G +L+Y D+ T+ +A+ +R L
Sbjct: 124 ATAMYIARLLKPLGVKVTRIAHGLPVGGDLEYADEVTLAKALENRREL 171
>gi|94500849|ref|ZP_01307375.1| recombination protein RecR [Oceanobacter sp. RED65]
gi|94426968|gb|EAT11950.1| recombination protein RecR [Oceanobacter sp. RED65]
Length = 199
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L++ L +PG GP+SA+R LHL++K + L ++ ++V C C N+
Sbjct: 8 INELVEALTILPGVGPKSAQRLALHLLEKDQSGAHRLVGMLSKALDEVGHCKKCRNLTEK 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R + VVE A++ A+E++ Y VL G LSP+D IGPE +G+
Sbjct: 68 EYCPICDDAKRTDEQLCVVETPAEVLAIEQT-GFKGRYFVLFGRLSPIDGIGPEKLGLDQ 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +++ ++E+I A + T+EGQ T+ YI L+G +V ITR+A+G+P+G EL+Y+D G
Sbjct: 127 LKQQVVENGVKEVILATNPTVEGQATSQYIQQMLQGSNVLITRIAHGVPLGGELEYVDGG 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R
Sbjct: 187 TLAHALAGRKAF 198
>gi|6634593|emb|CAB64486.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+ICID RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+DI +++
Sbjct: 67 DPCSICIDPSRDQTTILVLEDSRDVAVMENIQEYHGLYHVLHGLISPMNGISPDDINLKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|33240548|ref|NP_875490.1| recombinational DNA repair protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238076|gb|AAQ00143.1| Recombinational DNA repair protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 169
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
+HL+++ E+ + + A+ N KV C C ++ C IC++ +RD S++ VV D
Sbjct: 1 MHLLRQPEEKIKAFSNALLNARTKVGQCKKCFHLTAEIECEICLNPKRDKSLLCVVADSR 60
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
DL ALER++ LYHVLGG +SP+D IGPE + I +L++R+ + E+I A++ ++EG
Sbjct: 61 DLIALERTREYKGLYHVLGGLISPMDGIGPELLNISALVQRVSNESTAEVILALTPSVEG 120
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
TT+ YI LK + VK+TR+AYG+P+GSEL+Y D+ T+ AI R
Sbjct: 121 DTTSLYIARLLK-VFVKVTRIAYGLPVGSELEYADEVTLTRAIEGR 165
>gi|58336716|ref|YP_193301.1| recombination protein RecR [Lactobacillus acidophilus NCFM]
gi|227903278|ref|ZP_04021083.1| recombinational DNA repair protein [Lactobacillus acidophilus ATCC
4796]
gi|73621492|sp|Q5FM04|RECR_LACAC RecName: Full=Recombination protein recR
gi|58254033|gb|AAV42270.1| recombinational DNA repair protein [Lactobacillus acidophilus NCFM]
gi|227868907|gb|EEJ76328.1| recombinational DNA repair protein [Lactobacillus acidophilus ATCC
4796]
Length = 199
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I +LI ++PG G ++A R + + ++ + ++A+ + + C ICGN+
Sbjct: 7 IAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFSKALIQVKQDIHQCPICGNITEK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD + I+VVE DL ALE + LYHVL G LSP+D IGPE++ I+S
Sbjct: 67 EICDICSNPNRDQTTIMVVEQPKDLMALEEMGEYDGLYHVLHGVLSPMDGIGPEEVNIKS 126
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R++ ++E+I A+++T EG++T+ YI +K +K+TRLA G+ +GS+++Y +
Sbjct: 127 LITRLQKNDDVKEVILALNSTPEGESTSMYISKLIKPAGIKVTRLAAGLSVGSDIEYANS 186
Query: 189 GTIFEAIRSRTVL 201
T+ A++ RT L
Sbjct: 187 ITLKRAVQGRTTL 199
>gi|118619460|ref|YP_907792.1| recombination protein RecR [Mycobacterium ulcerans Agy99]
gi|171460880|sp|A0PVF2|RECR_MYCUA RecName: Full=Recombination protein recR
gi|118571570|gb|ABL06321.1| recombination protein RecR [Mycobacterium ulcerans Agy99]
Length = 203
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CGNV
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCGNVSDD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+ PL IGPE + I+
Sbjct: 66 ERCRICADPRRDGALVCVVEEPKDIQAVERTREYRGRYHVLGGAFDPLSGIGPEQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ +R++ I E+I A EG+ TA Y++ L+ I + +TR+A G+PMG +L+
Sbjct: 126 LLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +
Sbjct: 186 FADELTLGRALTGRRAM 202
>gi|291548742|emb|CBL25004.1| recombination protein RecR [Ruminococcus torques L2-14]
Length = 198
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ +R+PG G +SA+R H++ + + LA A+ + V C C +
Sbjct: 6 NQISRLIEEFSRLPGIGNKSAQRLAFHVINMPVEQVEGLANAIVDARKNVRYCKECCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP DI +
Sbjct: 66 DKDICPICSNPDRDHKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER++ + E+I A ++++EG+TTA YI +K + +K++R+A G+P+G +L+Y+D
Sbjct: 126 KELMERLQ-GDVDEVIIATNSSLEGETTAMYISKLIKPVGIKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTEL 198
>gi|6634588|emb|CAB64482.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 119/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI +++
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|295100447|emb|CBK97992.1| recombination protein RecR [Faecalibacterium prausnitzii L2-6]
Length = 199
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 115/193 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E LI+ ++ PG G + A R ++ + LAEA+ N + ++ C +C N
Sbjct: 4 TAAPLEKLIEQFSQFPGIGRKGATRMAYQVLSMSDADAAALAEAIQNAHTRLHRCRVCQN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC +RD S I VVE D+ A ER++ + LYHVL G +SP+D IG E +
Sbjct: 64 YTEAELCPICSSAKRDRSTICVVETPRDVQAFERTREYHGLYHVLHGLISPMDGIGAEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R+ +++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G L+Y
Sbjct: 124 SVKELLARLGSGEVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGGSLEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T++ A+ R
Sbjct: 184 TDETTLYRALSGR 196
>gi|156742263|ref|YP_001432392.1| recombination protein RecR [Roseiflexus castenholzii DSM 13941]
gi|189029370|sp|A7NFA0|RECR_ROSCS RecName: Full=Recombination protein recR
gi|156233591|gb|ABU58374.1| recombination protein RecR [Roseiflexus castenholzii DSM 13941]
Length = 205
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 113/186 (60%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L+R+PG GP++A R T L++ ++L LA A+ + +V LCS C + D C
Sbjct: 17 LIEELSRLPGVGPKTASRLTFFLLRAPDELPRALANALIGLKQQVQLCSRCYFITQNDLC 76
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
AIC + RD ++ VVE+ D+ A+ER+ LYHVL G ++PL+ + EDI L++
Sbjct: 77 AICANPARDQRIVCVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNREDIYFDELLD 136
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + I E+I A + +EG+ TA ++ L + ++TRLA G+P G +L++ D GT+
Sbjct: 137 RVRAEPIDEVIIATNPNLEGEATAFHLQRALAPLGARVTRLARGLPTGGDLEWADPGTLG 196
Query: 193 EAIRSR 198
A+ R
Sbjct: 197 SALEGR 202
>gi|15901507|ref|NP_346111.1| recombination protein RecR [Streptococcus pneumoniae TIGR4]
gi|15903559|ref|NP_359109.1| recombination protein RecR [Streptococcus pneumoniae R6]
gi|111658548|ref|ZP_01409211.1| hypothetical protein SpneT_02000304 [Streptococcus pneumoniae
TIGR4]
gi|116516007|ref|YP_816941.1| recombination protein RecR [Streptococcus pneumoniae D39]
gi|148984110|ref|ZP_01817405.1| recombination protein RecR [Streptococcus pneumoniae SP3-BS71]
gi|148988719|ref|ZP_01820152.1| recombination protein RecR [Streptococcus pneumoniae SP6-BS73]
gi|148993756|ref|ZP_01823183.1| recombination protein RecR [Streptococcus pneumoniae SP9-BS68]
gi|149001956|ref|ZP_01826910.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS69]
gi|149006742|ref|ZP_01830428.1| recombination protein RecR [Streptococcus pneumoniae SP18-BS74]
gi|149011466|ref|ZP_01832713.1| recombination protein RecR [Streptococcus pneumoniae SP19-BS75]
gi|149021234|ref|ZP_01835480.1| recombination protein RecR [Streptococcus pneumoniae SP23-BS72]
gi|168486960|ref|ZP_02711468.1| recombination protein RecR [Streptococcus pneumoniae CDC1087-00]
gi|168491446|ref|ZP_02715589.1| recombination protein RecR [Streptococcus pneumoniae CDC0288-04]
gi|168575139|ref|ZP_02721102.1| recombination protein RecR [Streptococcus pneumoniae MLV-016]
gi|182684614|ref|YP_001836361.1| recombination protein RecR [Streptococcus pneumoniae CGSP14]
gi|194398154|ref|YP_002038286.1| recombination protein RecR [Streptococcus pneumoniae G54]
gi|225857288|ref|YP_002738799.1| recombination protein RecR [Streptococcus pneumoniae P1031]
gi|225861500|ref|YP_002743009.1| recombination protein RecR [Streptococcus pneumoniae Taiwan19F-14]
gi|237650678|ref|ZP_04524930.1| recombination protein RecR [Streptococcus pneumoniae CCRI 1974]
gi|237822436|ref|ZP_04598281.1| recombination protein RecR [Streptococcus pneumoniae CCRI 1974M2]
gi|307068297|ref|YP_003877263.1| recombinational DNA repair ATPase [Streptococcus pneumoniae AP200]
gi|61230232|sp|P0A454|RECR_STRR6 RecName: Full=Recombination protein recR
gi|122278213|sp|Q04J97|RECR_STRP2 RecName: Full=Recombination protein recR
gi|226726311|sp|B5E722|RECR_STRP4 RecName: Full=Recombination protein recR
gi|238691182|sp|B2IRS7|RECR_STRPS RecName: Full=Recombination protein recR
gi|254790789|sp|C1CM11|RECR_STRZP RecName: Full=Recombination protein recR
gi|254790790|sp|C1CST7|RECR_STRZT RecName: Full=Recombination protein recR
gi|269969522|sp|P0CB76|RECR_STRPN RecName: Full=Recombination protein recR
gi|4009464|gb|AAC95434.1| RecM [Streptococcus pneumoniae G54]
gi|6634578|emb|CAB64474.1| recombination protein [Streptococcus pneumoniae]
gi|6634583|emb|CAB64478.1| recombination protein [Streptococcus pneumoniae]
gi|14973164|gb|AAK75751.1| recombination protein RecR [Streptococcus pneumoniae TIGR4]
gi|15459178|gb|AAL00320.1| Recombination protein RecR [Streptococcus pneumoniae R6]
gi|116076583|gb|ABJ54303.1| recombination protein RecR [Streptococcus pneumoniae D39]
gi|147759765|gb|EDK66755.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS69]
gi|147761657|gb|EDK68621.1| recombination protein RecR [Streptococcus pneumoniae SP18-BS74]
gi|147764456|gb|EDK71387.1| recombination protein RecR [Streptococcus pneumoniae SP19-BS75]
gi|147923399|gb|EDK74512.1| recombination protein RecR [Streptococcus pneumoniae SP3-BS71]
gi|147925920|gb|EDK76995.1| recombination protein RecR [Streptococcus pneumoniae SP6-BS73]
gi|147927712|gb|EDK78736.1| recombination protein RecR [Streptococcus pneumoniae SP9-BS68]
gi|147930335|gb|EDK81319.1| recombination protein RecR [Streptococcus pneumoniae SP23-BS72]
gi|182629948|gb|ACB90896.1| recombination protein RecR [Streptococcus pneumoniae CGSP14]
gi|183570091|gb|EDT90619.1| recombination protein RecR [Streptococcus pneumoniae CDC1087-00]
gi|183574138|gb|EDT94666.1| recombination protein RecR [Streptococcus pneumoniae CDC0288-04]
gi|183578849|gb|EDT99377.1| recombination protein RecR [Streptococcus pneumoniae MLV-016]
gi|194357821|gb|ACF56269.1| recombination protein RecR [Streptococcus pneumoniae G54]
gi|225725521|gb|ACO21373.1| recombination protein RecR [Streptococcus pneumoniae P1031]
gi|225727686|gb|ACO23537.1| recombination protein RecR [Streptococcus pneumoniae Taiwan19F-14]
gi|301800483|emb|CBW33122.1| recombination protein RecR [Streptococcus pneumoniae OXC141]
gi|301802374|emb|CBW35128.1| recombination protein RecR [Streptococcus pneumoniae INV200]
gi|306409834|gb|ADM85261.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus
pneumoniae AP200]
gi|332074007|gb|EGI84485.1| recombination protein RecR [Streptococcus pneumoniae GA41301]
gi|332200231|gb|EGJ14304.1| recombination protein RecR [Streptococcus pneumoniae GA47368]
gi|332201097|gb|EGJ15168.1| recombination protein RecR [Streptococcus pneumoniae GA47901]
Length = 198
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|255994276|ref|ZP_05427411.1| recombination protein RecR [Eubacterium saphenum ATCC 49989]
gi|255993944|gb|EEU04033.1| recombination protein RecR [Eubacterium saphenum ATCC 49989]
Length = 198
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
ENLI L+R+PG G ++A+R + + ++ ++ A+ N + C CG +
Sbjct: 7 FENLITELSRLPGIGRKTAQRLAIFITDMEDNKALSISRAIEEAVNNLKPCDTCGCLTDN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C D R+ VI VVE+ D+ A+E+ K YHVLGG +SPLD IGP+ + I +
Sbjct: 67 GKCLFCSDPLRNDDVICVVENTIDIVAMEKLKNYRGRYHVLGGVISPLDGIGPDHLRIDT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A S TIEG+ TA+YI +L+ + +K TR+A GIP+G + DY+D
Sbjct: 127 LLSRVVKYDVKEVILATSVTIEGEATANYIAKELEKLGIKATRIAKGIPVGGKFDYIDAM 186
Query: 190 TIFEAIRSR 198
T+ AI R
Sbjct: 187 TMQNAIDKR 195
>gi|320354018|ref|YP_004195357.1| recombination protein RecR [Desulfobulbus propionicus DSM 2032]
gi|320122520|gb|ADW18066.1| recombination protein RecR [Desulfobulbus propionicus DSM 2032]
Length = 203
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 119/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I +E LI L R+PG G ++A R L+++++ LA + +++ + LC C
Sbjct: 2 QIIPPALERLIADLTRLPGIGRKTATRLALYILRRPAAEGRNLAHDLMVLHDTIHLCHQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
TDPCAIC + RD+ ++ VVE+ D A+E++ YH+L G ++P+D IGP+
Sbjct: 62 FTFSETDPCAICGNPGRDSRLVCVVEEPGDQIAIEKTGVFRGTYHILHGVIAPMDGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I+ L +R+ ++ E++ A S+T+ G+ TA Y+ + L+ V+++RLA GIPMG ++
Sbjct: 122 ELKIRELRQRVASGQVDEVLIATSSTVPGEATASYLAEMLQDTKVRLSRLACGIPMGMDI 181
Query: 184 DYLDDGTIFEAIRSR 198
Y D+ T+ A+ SR
Sbjct: 182 KYADEHTLARAVESR 196
>gi|304312975|ref|YP_003812573.1| Recombinational DNA repair protein (RecF pathway) [gamma
proteobacterium HdN1]
gi|301798708|emb|CBL46941.1| Recombinational DNA repair protein (RecF pathway) [gamma
proteobacterium HdN1]
Length = 198
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 112/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L+ L ++PG GP+SA+R L L+++ + LA+A+ N V C C +
Sbjct: 7 IARLVDALRQLPGVGPKSAQRMALFLLERNRRAAANLADALQNALATVRRCRQCRLLCEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +RD S++ VVE AD++A+E+S A +Y VL G LSPLD IGPE +G+
Sbjct: 67 ELCEICAHSERDHSLLCVVESPADVFAIEQSGAFRGVYFVLSGRLSPLDGIGPEQLGLVD 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ I ELI A SAT+EG+ TA Y+ + + TR+A G+P+G EL+ +D
Sbjct: 127 LQARLANGGINELILATSATLEGEATAFYLSEMANEAGITATRIAQGVPIGGELEQVDSH 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 187 TLSLALAGRKRL 198
>gi|298230137|ref|ZP_06963818.1| recombination protein RecR [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254424|ref|ZP_06978010.1| recombination protein RecR [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503416|ref|YP_003725356.1| recombination protein RecR [Streptococcus pneumoniae TCH8431/19A]
gi|298239011|gb|ADI70142.1| recombination protein RecR [Streptococcus pneumoniae TCH8431/19A]
Length = 198
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICGRLTDE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|227832006|ref|YP_002833713.1| recombination protein [Corynebacterium aurimucosum ATCC 700975]
gi|262184138|ref|ZP_06043559.1| recombination protein RecR [Corynebacterium aurimucosum ATCC
700975]
gi|227453022|gb|ACP31775.1| recombination protein [Corynebacterium aurimucosum ATCC 700975]
Length = 218
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 120/210 (57%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R H++ + + + L +A+ + + V C IC N+
Sbjct: 6 LQDLIDEFSRLPGIGPKSAQRIAFHVLHQDPEEIDRLQKALGAVRDGVTFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C ICI+ QRDAS I VVE+ D+ +ER+ + YHVLGG+L PL +GP+D+ I
Sbjct: 66 EVCRICINSQRDASTICVVEEPKDIQVIERTGEYDGRYHVLGGALDPLANVGPKDLNISQ 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGID-V 168
L++R+ + I E+I A EG+ TA Y++ L+ +
Sbjct: 126 LLQRLGGVLPDRELADSTPEEPLYDDSPDITEVILATDPNTEGEATAAYLVRLLRDFPGL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 186 KITRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|294101972|ref|YP_003553830.1| recombination protein RecR [Aminobacterium colombiense DSM 12261]
gi|293616952|gb|ADE57106.1| recombination protein RecR [Aminobacterium colombiense DSM 12261]
Length = 204
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 110/187 (58%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L+ +L R+PG G +SARR ++++ LA A+ + ++C CS CGN+ DP
Sbjct: 9 QLVTLLKRLPGVGEKSARRMAFFIIQQPGSYPEELAIALHGLKERLCECSKCGNITDVDP 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C+IC D R+ + VVE DL ++E++ N LYHVL G +SPLD + L
Sbjct: 69 CSICTDPLRERQTLCVVETAEDLLSMEQAGIYNGLYHVLKGKISPLDGEDLPPSEYERLK 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
ERI +++E+I A + +EG T + + +L+ +DVKI+RLAYG+P+G +++ D T+
Sbjct: 129 ERIINTRVKEVIIATNPRVEGDLTFYSLFSELEDLDVKISRLAYGLPVGGSIEFADRITL 188
Query: 192 FEAIRSR 198
A SR
Sbjct: 189 HAAFESR 195
>gi|300172667|ref|YP_003771832.1| recombination protein RecR [Leuconostoc gasicomitatum LMG 18811]
gi|299887045|emb|CBL91013.1| recombination protein RecR [Leuconostoc gasicomitatum LMG 18811]
Length = 201
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV--D 67
I LI ++PG G ++A R + + E+ + ++++ + + CS+CGN+ +
Sbjct: 7 IAKLIDSYTKLPGIGSKTATRLAFYTLGMDEKDVLDFSKSLVSAKKDLTFCSVCGNITEN 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ +PC IC D RD + VVE+ D+ A+E ++ + LYHVL G +SP GPEDI +
Sbjct: 67 SINPCVICRDVTRDQDTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPEDINL 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ E ++I E+I + T EG+ TA Y+ LK +K+TRLA+G+ +GS++DY
Sbjct: 127 PSLIRRLSEHQEIDEVIVGTNVTAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIDYA 186
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A++ RT L
Sbjct: 187 DQLTLIKAVQGRTEL 201
>gi|171463392|ref|YP_001797505.1| recombination protein RecR [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470334|sp|B1XU64|RECR_POLNS RecName: Full=Recombination protein recR
gi|171192930|gb|ACB43891.1| recombination protein RecR [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 204
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L +PG GP+SA+R +L++ LA+++ V C+ C T C
Sbjct: 14 LIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVETVGHCACCNTFSETQVC 73
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+ C D++RD S++ +VE AD +E++ + Y VL G LSPLD +GP +I L+
Sbjct: 74 STCSDERRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFDRLLN 133
Query: 133 RIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
RIE IRE++ A + T EG+ TAHYI + LK +K+TR+A GIP+G EL+Y+D
Sbjct: 134 RIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRIARGIPVGGELEYVDA 193
Query: 189 GTIFEAIRSR 198
GT+ A+ R
Sbjct: 194 GTLARALMDR 203
>gi|261367394|ref|ZP_05980277.1| recombination protein RecR [Subdoligranulum variabile DSM 15176]
gi|282570160|gb|EFB75695.1| recombination protein RecR [Subdoligranulum variabile DSM 15176]
Length = 198
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL+ AR PG G + A R ++ + LA A+ + + C IC +
Sbjct: 8 LENLVDQFARFPGIGRKGATRMAYEVMSMSNEQAMELARAIEHAKKDLHRCRICQDYTAG 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC +RD SVI VVE D+ ++ER+ N LYHVL G +SP+D IG + + ++
Sbjct: 68 EVCKICSSPKRDRSVICVVESPRDIKSIERTHEYNGLYHVLHGLISPMDGIGADQLCVKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ++E+I A S T+EG+ TA Y+ +K + ++ TRLAYG+P+GS L+Y D+
Sbjct: 128 LLARLN-ETVKEVIMATSPTVEGEATAMYLAKLIKPLGIRTTRLAYGLPVGSSLEYADET 186
Query: 190 TIFEAIRSRTVL 201
T++ A++ R L
Sbjct: 187 TLYRAMQGRGEL 198
>gi|83815474|ref|YP_446653.1| recombination protein RecR [Salinibacter ruber DSM 13855]
gi|294508588|ref|YP_003572647.1| Recombination protein recR [Salinibacter ruber M8]
gi|123527969|sp|Q2RZH8|RECR_SALRD RecName: Full=Recombination protein recR
gi|83756868|gb|ABC44981.1| recombination protein RecR [Salinibacter ruber DSM 13855]
gi|294344917|emb|CBH25695.1| Recombination protein recR [Salinibacter ruber M8]
Length = 237
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 37/232 (15%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T + +E L++ ++P G ++ARR +++K ++ + +A A+ ++ V CS C
Sbjct: 2 QYTSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTSVKEDVQRCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
V DPC IC +RDAS I VVE+ +DL A+E++ +YHVLGG +SPLD +GP+
Sbjct: 62 YVVADQDPCPICGSDKRDASTICVVEESSDLTAIEQTNEYRGVYHVLGGVISPLDGVGPD 121
Query: 124 DIGIQSLIERIEV-------------------------------------KKIRELIFAI 146
D+ + L RI+ + E+I A+
Sbjct: 122 DLRVHELATRIDPSFEDTAADAAPEPNTTPDGEADAEAPPSENGGADEAESGVDEVILAV 181
Query: 147 SATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +EG TTA+YI L+ DV++TR+A G+P+G +L+Y D+ T+ A+ R
Sbjct: 182 NPNVEGDTTAYYISQLLEPFDVRVTRIARGLPIGGDLEYADEATLSRALEGR 233
>gi|6624708|emb|CAB63848.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ ALE + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPIRDQTTILVLEDSRDVAALENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|289167462|ref|YP_003445731.1| recombination protein [Streptococcus mitis B6]
gi|288907029|emb|CBJ21863.1| recombination protein [Streptococcus mitis B6]
Length = 198
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 118/192 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVATMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|78484876|ref|YP_390801.1| recombination protein RecR [Thiomicrospira crunogena XCL-2]
gi|123555876|sp|Q31I96|RECR_THICR RecName: Full=Recombination protein recR
gi|78363162|gb|ABB41127.1| DNA replication and repair protein RecR [Thiomicrospira crunogena
XCL-2]
Length = 197
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +P GP+SA+R L++ +Q LA A+ + KV C C N+ T
Sbjct: 6 INELIDAFKLLPTIGPKSAQRLAYFLLQNHQQDGHRLASAIESALEKVGYCQQCRNLSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C + R + +VE D+ A+E+S Y VL G LSP+D IGP+++G+
Sbjct: 66 EICGFCASKSRQTDQLCIVETPTDVVAIEQSGIYKGQYFVLMGHLSPIDGIGPDELGLPI 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ +I+ELI A + T+EG+ TAHYI ++ +TRLA GIP+G EL+Y+D G
Sbjct: 126 LRDRLAQGEIQELILATNPTVEGEATAHYIQQMAIEFNISVTRLAQGIPLGGELEYIDSG 185
Query: 190 TIFEAIRSR 198
T+ +A R
Sbjct: 186 TLGQAFAGR 194
>gi|169627424|ref|YP_001701073.1| recombination protein RecR [Mycobacterium abscessus ATCC 19977]
gi|169239391|emb|CAM60419.1| Recombination protein RecR [Mycobacterium abscessus]
Length = 202
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CGNV
Sbjct: 6 VQDLIDELGKLPGVGPKSAQRIAFHLLGVEAPDIDRLTAALTRVRDGVQFCEVCGNVSDK 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 ERCRICADPRRDIALVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ RI ++ I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L+
Sbjct: 126 LLTRIGTEEDGVSISEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADELTLGRALSGRRPL 202
>gi|319942673|ref|ZP_08016980.1| hypothetical protein HMPREF9464_02199 [Sutterella wadsworthensis
3_1_45B]
gi|319803756|gb|EFW00691.1| hypothetical protein HMPREF9464_02199 [Sutterella wadsworthensis
3_1_45B]
Length = 208
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQ-LLGPLAEAMANIYNKVCLCSICGNVDT 68
I L+K L +PG+GPRSA+RA L+ K + L L +A+A+ KV C C
Sbjct: 9 IAALVKALEALPGYGPRSAQRAAFFLLSPKRRGELQALRQALADAETKVHRCPRCRTWCE 68
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D RDAS++ VVE V D ALE+S LY +LGG LSP+D +GP +IG
Sbjct: 69 GAVCEICADPSRDASLLCVVETVQDQMALEKSLNWPGLYFILGGRLSPMDDMGPTEIGFP 128
Query: 129 SLIERIE----VKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSE 182
L+ RIE +RE++ A S T EG TA+Y+M +K ++ITRLA G+P G E
Sbjct: 129 ELLVRIEEGLAENGLREIVVATSYTPEGDATAYYLMGAVKKRWPQLRITRLARGLPSGLE 188
Query: 183 LDYLDDGTIFEAIRSR 198
++Y D TI AI R
Sbjct: 189 VEYTDLATIAAAIEDR 204
>gi|289450283|ref|YP_003475321.1| recombination protein RecR [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184830|gb|ADC91255.1| recombination protein RecR [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 200
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 120/190 (63%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ NLI L ++P G R+A++ +++ E LA+A+ ++ LCS+C N+ +
Sbjct: 8 LANLISKLGQLPTIGNRTAQKLAFYIMSMPEAEALALADAVRKARTEIHLCSVCCNLTDS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D+ RD S+I VVE AD+ ALE+ + YHVL G++SPL IGP+DI ++
Sbjct: 68 EVCSICADKTRDNSIICVVESPADVSALEKLHVFHGRYHVLHGAVSPLKNIGPDDIKLKE 127
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ + +I+E+ A S+T EG+ TA YI LK +K TRLA+G+PMGS L++ D+
Sbjct: 128 LFSRLAAEPEIKEVFLANSSTPEGEATALYISRLLKPAGIKTTRLAHGLPMGSSLEFADE 187
Query: 189 GTIFEAIRSR 198
T+ +AI R
Sbjct: 188 ITLSKAIEGR 197
>gi|226355493|ref|YP_002785233.1| recombination protein RecR [Deinococcus deserti VCD115]
gi|259563690|sp|C1D0V5|RECR_DEIDV RecName: Full=Recombination protein recR
gi|226317483|gb|ACO45479.1| putative recombination protein RecR [Deinococcus deserti VCD115]
Length = 198
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 115/187 (61%), Gaps = 2/187 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + C +C N+ +
Sbjct: 9 SLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLAGALLAAKRDLHTCPVCFNITDAER 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD ++I VVE+ D+ A+ERS LYHVL G LSP++ +GPE + I+ L+
Sbjct: 69 CDVCSDPSRDQNLICVVEEPGDVIAIERSGEYRGLYHVLHGVLSPMNGVGPEKLHIKPLL 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R V++ +E+I A T+EG TA Y+ L+ + ++R+AYG+P+G L+Y D+ T+
Sbjct: 129 PR--VQEGQEIILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGALEYADEVTL 186
Query: 192 FEAIRSR 198
A+ R
Sbjct: 187 GRALTGR 193
>gi|240146636|ref|ZP_04745237.1| recombination protein RecR [Roseburia intestinalis L1-82]
gi|257201178|gb|EEU99462.1| recombination protein RecR [Roseburia intestinalis L1-82]
gi|291537735|emb|CBL10847.1| Recombinational DNA repair protein (RecF pathway) [Roseburia
intestinalis M50/1]
gi|291537869|emb|CBL10980.1| recombination protein RecR [Roseburia intestinalis XB6B4]
Length = 198
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ L+ +PG G +SA+R H++ + + L+ A+ + V C C +
Sbjct: 7 QISKLIQELSSLPGIGAKSAQRLAFHILNMPVEQVEELSSAIVDARKNVRYCKECFTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D R+ I+VVED DL A E++ + +YHVL G++SP+ IGP DI ++
Sbjct: 67 DELCPICKDAGRNHKTIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPADIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-KDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRT 199
T+ A+ RT
Sbjct: 186 VTLLRALEGRT 196
>gi|307719901|ref|YP_003875433.1| recombination protein RecR [Spirochaeta thermophila DSM 6192]
gi|306533626|gb|ADN03160.1| recombination protein RecR [Spirochaeta thermophila DSM 6192]
Length = 202
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 111/191 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E LI L+R+PG G +SA R L+K + L + + ++V CS CG
Sbjct: 2 NSLEVLIGHLSRLPGVGKKSASRIAHWLLKADRAFVQALGRLIMELPDRVKRCSRCGMYS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D RD I VVE +D+WA+E + LYHVL G+++PL+ + PED+ I
Sbjct: 62 DATLCEICSDPARDHGTICVVEQPSDVWAIEATHTYRGLYHVLHGAIAPLEGVRPEDLTI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R+E + + E+I A + T+EG TTA Y++ LK K++RLA G+P+G +L+Y D
Sbjct: 122 DALVRRLEREPVEEVIIATNPTVEGDTTALYLVRLLKDWGGKVSRLALGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSR 198
T+ A+ R
Sbjct: 182 RVTLARALEGR 192
>gi|332283345|ref|YP_004415256.1| recombination protein RecR [Pusillimonas sp. T7-7]
gi|330427298|gb|AEC18632.1| recombination protein RecR [Pusillimonas sp. T7-7]
Length = 202
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 113/191 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + +LI+ L R+PG G RSARR HL++ L+ A+A+ + C+ C
Sbjct: 9 EPLTSLIEALRRLPGVGVRSARRMAYHLLQYDISGAEQLSRALASAAQGLRHCARCNGFA 68
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D CA C + +RD S++ VVE AD +E S LY+VL G L+PL+ +GP +
Sbjct: 69 EEDVCATCTNPKRDPSLLCVVETPADQNMIESSHGYRGLYYVLMGRLTPLEGVGPRALQF 128
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R+ ++E+I A + T EG+TTAHY+ + L+ + ++RLA G+P GSEL+Y+D
Sbjct: 129 DRLIQRVSDGIVQEVILATNFTAEGETTAHYLSELLRARGLTVSRLARGVPAGSELEYVD 188
Query: 188 DGTIFEAIRSR 198
GTI A+ R
Sbjct: 189 AGTIAWALMER 199
>gi|329908504|ref|ZP_08274878.1| Recombination protein RecR [Oxalobacteraceae bacterium IMCC9480]
gi|327546695|gb|EGF31647.1| Recombination protein RecR [Oxalobacteraceae bacterium IMCC9480]
Length = 198
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L + L R+PG GP+SA+R HL++ L A+ ++V CS C
Sbjct: 3 TPSSLEFLTETLRRLPGVGPKSAQRIAYHLMQHDRDGAEQLGRALLQAVDRVQHCSRCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C C+D +RDA+++ VVE D +E++ Y VL G LSPLD IGP+DI
Sbjct: 63 FTEHLVCETCLDPERDATLLCVVETPGDQLMIEQTLTYKGFYFVLMGRLSPLDGIGPKDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LI R + E++ A + T EG+ TAHYI + +K + ++RLA G+P+G EL+Y
Sbjct: 123 HLDKLILRASDGIVAEVVLATNFTNEGEATAHYISETMKARGLSVSRLARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSR 198
+D GTI A+ R
Sbjct: 183 VDAGTIARAMLDR 195
>gi|296120962|ref|YP_003628740.1| recombination protein RecR [Planctomyces limnophilus DSM 3776]
gi|296013302|gb|ADG66541.1| recombination protein RecR [Planctomyces limnophilus DSM 3776]
Length = 207
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 118/192 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ + L++ LA +PG G +SA R HL+ E+ LA A+ ++ + CS+C N+
Sbjct: 13 GRHVGLLVQQLAALPGIGQKSAERLAQHLLDCSEEEAAALAHAILDVRRTIRRCSVCHNL 72
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC+D +RD ++ +VE DL ALE + +YHVLGG ++PL +GP+D+
Sbjct: 73 TEQETCDICLDSRRDQGLVCIVEQPRDLLALEATGTFGGVYHVLGGRIAPLSGVGPDDLN 132
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ +LI R++ KIREL+ A + T+EG TA YI++ L VKITRLA GI GS L++
Sbjct: 133 LATLIRRVKAGKIRELVMATNPTLEGDGTALYIVNLLADEPVKITRLARGIATGSVLEFA 192
Query: 187 DDGTIFEAIRSR 198
+ + +A++ R
Sbjct: 193 NREMLSDALKGR 204
>gi|260221003|emb|CBA29133.1| Recombination protein recR [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 196
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 111/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG G +SA+R HL++ L+ A+ + V C C
Sbjct: 7 LDTLIQALRGLPGVGVKSAQRMAFHLLQHDRPAAQFLSRALQQAADTVHHCERCHTFTQD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+ C+D++RD S + VVE AD A+ER+ A LY VL G LSPLD +GP D+G +
Sbjct: 67 AVCSTCLDERRDRSQLCVVETPADQSAMERTGAYKGLYFVLMGKLSPLDGVGPNDLGFKK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R ++E+I A + T EG+ TA+ I + LK ++ TRLA G+P+GSEL+Y+D G
Sbjct: 127 LFDRACDGVVQEVILATNFTAEGEATAYVIAEGLKARGLRPTRLARGVPVGSELEYVDLG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIAHALVDR 195
>gi|315187316|gb|EFU21072.1| DNA replication and repair protein RecR [Spirochaeta thermophila
DSM 6578]
Length = 202
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 111/191 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E LI L+R+PG G +SA R L+K + L + + ++V CS CG
Sbjct: 2 NSLEVLIGHLSRLPGVGKKSASRIAHWLLKADRAFVQALGRLIMELPDRVKRCSRCGMYS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D RD I VVE +D+WA+E + LYHVL G+++PL+ + PED+ I
Sbjct: 62 DATLCEICSDPARDHRTICVVEQPSDVWAIEATHTYRGLYHVLHGAIAPLEGVRPEDLTI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R+E + + E+I A + T+EG TTA Y++ LK K++RLA G+P+G +L+Y D
Sbjct: 122 DALVRRLEREPVEEVIIATNPTVEGDTTALYLVRLLKDWGGKVSRLALGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSR 198
T+ A+ R
Sbjct: 182 RVTLARALEGR 192
>gi|224541624|ref|ZP_03682163.1| hypothetical protein CATMIT_00795 [Catenibacterium mitsuokai DSM
15897]
gi|224525462|gb|EEF94567.1| hypothetical protein CATMIT_00795 [Catenibacterium mitsuokai DSM
15897]
Length = 197
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K E L+ +PG G + A R + E+ + ++A+ + V C ICGN+
Sbjct: 5 KSFEELMTCFKMLPGIGNKGAERMAYAIYDMSEEDVKRFSQALTSFKENVHTCPICGNLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D +RD S I VVE D++A+E+ K + LYHVLGG++S +D +D+ I
Sbjct: 65 EGDKCEICADHERDQSTICVVESPKDVFAMEKMKEYHGLYHVLGGTISIMDGKTMDDLNI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL +RI +E+I A +AT EG+TTA ++ L V TR+A+G+P+GS LDY D
Sbjct: 125 MSLFDRI-TPDTKEVIIATNATREGETTALFLAKLLDKKGVNTTRIAHGLPIGSSLDYAD 183
Query: 188 DGTIFEAIRSR 198
+ T+ ++ R
Sbjct: 184 ELTLLKSFEGR 194
>gi|296393612|ref|YP_003658496.1| recombination protein RecR [Segniliparus rotundus DSM 44985]
gi|296180759|gb|ADG97665.1| recombination protein RecR [Segniliparus rotundus DSM 44985]
Length = 212
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+ A+R HLV + + L A+A I + V C ICGN+
Sbjct: 6 VQDLIDELSRLPGVGPKGAQRIAFHLVGSPKPEIDRLVSALAKIRDGVRFCDICGNIAAD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD + I VV D+ A+ER++ + YHVLGG+L+PL IGP+ + ++
Sbjct: 66 VTCRVCADARRDLTRICVVSQPKDVAAIERTREFHGRYHVLGGALNPLAGIGPDRLRVKE 125
Query: 130 LIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ R+ + E+I A EG+ TA Y+ L D+++TRLA G+PMG +L+
Sbjct: 126 LLTRLGASADGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADEMTLGRALAGRRAL 202
>gi|119897250|ref|YP_932463.1| recombination protein RecR [Azoarcus sp. BH72]
gi|171704428|sp|A1K421|RECR_AZOSB RecName: Full=Recombination protein recR
gi|119669663|emb|CAL93576.1| recombination protein RecR [Azoarcus sp. BH72]
Length = 199
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GP+SA+R HL+++ ++ LA A+ + + C C N
Sbjct: 8 LDELIAALRCLPGVGPKSAQRMAYHLLQRDQRGAARLAGALGHALEVLRHCQRCNNFSEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C + +RD + + VVE ADL +E++++ N LY+VL G LSPLD +GP ++G++
Sbjct: 68 AVCQRCANPRRDPATLCVVEMPADLAMIEQTQSYNGLYYVLMGRLSPLDGVGPRELGLER 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R +++E+I A + T EG+ TAH + L VK++R++ G+P+G EL++ D G
Sbjct: 128 LIARATDGEVKEVILATNFTNEGEATAHTVATLLGARGVKVSRISRGVPVGGELEHTDTG 187
Query: 190 TIFEAIRSR 198
TI +A+ R
Sbjct: 188 TIAQALVER 196
>gi|159035924|ref|YP_001535177.1| recombination protein RecR [Salinispora arenicola CNS-205]
gi|157914759|gb|ABV96186.1| recombination protein RecR [Salinispora arenicola CNS-205]
Length = 197
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 115/191 (60%), Gaps = 3/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI L R+PG GP+SA+R H++ + LA+ + + V C+ C NV +
Sbjct: 6 IQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLADVLRKVKELVRFCTSCYNVAES 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ +GP+++ ++
Sbjct: 66 EQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGVGPDNLRVRE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD- 188
L+ R+ +RELI A EG+ TA Y+ +K + + ++RLA G+P+G +L+Y D+
Sbjct: 126 LLTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGIAVSRLASGLPVGGDLEYADEI 185
Query: 189 --GTIFEAIRS 197
G FE RS
Sbjct: 186 TLGRAFEGRRS 196
>gi|297538150|ref|YP_003673919.1| recombination protein RecR [Methylotenera sp. 301]
gi|297257497|gb|ADI29342.1| recombination protein RecR [Methylotenera sp. 301]
Length = 198
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L +PG GP+SA+R +L+++ L+ A+ V C +C
Sbjct: 7 LEQLIDSLRCLPGVGPKSAQRMAYYLLQRDRNGASALSAALETALEVVDHCKLCNTFSEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C RD +++ VVE DL LE + A +Y VL G LSPLD IGP++I +
Sbjct: 67 PICPLCAADNRDKNLLCVVEMPTDLLMLENTHAFMGMYFVLMGRLSPLDGIGPKEIHLDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI+R + + E+I A + T+EG+ TAHYI + LK +K +R+A G+PMG E++Y+D G
Sbjct: 127 LIKRAQDGLVNEVILATNYTVEGEATAHYISELLKTRGIKTSRIARGMPMGGEIEYVDSG 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAQAMMER 195
>gi|148997723|ref|ZP_01825287.1| recombination protein RecR [Streptococcus pneumoniae SP11-BS70]
gi|147756222|gb|EDK63264.1| recombination protein RecR [Streptococcus pneumoniae SP11-BS70]
Length = 198
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ A+E + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYPGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|168333589|ref|ZP_02691854.1| recombination protein RecR [Epulopiscium sp. 'N.t. morphotype B']
Length = 200
Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 118/192 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G ++ +LI L+++PG G +SA R +++ + + LA+A+ + C C V
Sbjct: 6 GSKMLSLIGELSKLPGIGTKSASRLAFYIISMPKDKVDQLAKAIVEAKENIRYCEKCCTV 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C IC D +R+ ++I+VVED D+ A E++ +YH+L G++SPL +GP DI
Sbjct: 66 TDDVLCPICKDDRREKNLIMVVEDSRDMAAYEKTGEYRGVYHILNGAISPLMGVGPNDIK 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ RI+ +KI E+I A + IEG+ TA YI K + VK TR+A+G+P+G +L+Y+
Sbjct: 126 VKELLSRIKNEKIDEIILATNPNIEGEATAMYISKLTKPLGVKTTRIAHGVPVGGDLEYV 185
Query: 187 DDGTIFEAIRSR 198
D+ T+ A++ R
Sbjct: 186 DEVTLSRALQGR 197
>gi|34497067|ref|NP_901282.1| recombination protein RecR [Chromobacterium violaceum ATCC 12472]
gi|73621478|sp|Q7NXL4|RECR_CHRVO RecName: Full=Recombination protein recR
gi|34102924|gb|AAQ59288.1| DNA repair DNA recombination zinc-finger protein [Chromobacterium
violaceum ATCC 12472]
Length = 198
Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L +PG GP++A+R HL+++ +Q LA A+ ++ C C
Sbjct: 7 LEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRCNTFSEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D+ R + +VE ADL LE++K + LY VL G +SPLD IGP+D+ +
Sbjct: 67 ELCAICADETRRRDQLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPKDLHLDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++ E++ A + T EG+ T+H + + K + +TR+A G+P+G EL+Y+D G
Sbjct: 127 LLARALDGQVSEIVIATNFTAEGEVTSHMLSELFKERGLTVTRIARGMPVGGELEYVDLG 186
Query: 190 TIFEAIRSR 198
T+ +A+ R
Sbjct: 187 TLAQAVYER 195
>gi|223983489|ref|ZP_03633675.1| hypothetical protein HOLDEFILI_00955 [Holdemania filiformis DSM
12042]
gi|223964661|gb|EEF68987.1| hypothetical protein HOLDEFILI_00955 [Holdemania filiformis DSM
12042]
Length = 197
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K E LI+ +PG G ++A R ++ ++ + A+A+ + N + C ICGN+
Sbjct: 4 KSFERLIECFQLLPGVGAKTAERYAFTMLDAPQEQIDLFAQALISCKNDIKRCRICGNIS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC ++ R++ +I VV+ D+ A+E+ + +YHVL G +S I PED+ I
Sbjct: 64 DQDECPICQNEDRNSRMICVVQSPKDVIAMEKMQEYAGVYHVLNGLISTSKGIMPEDLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ERI + E+I A +ATIEG+TTA Y+ L G V +TR+A+G+PMG LDY D
Sbjct: 124 DALLERI-TPETEEVIIATNATIEGETTALYLDKLLSGKGVLVTRIAHGLPMGGHLDYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +A R L
Sbjct: 183 ELTLIKAFEGRKSL 196
>gi|313622075|gb|EFR92664.1| recombination protein RecR [Listeria innocua FSL J1-023]
Length = 172
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 108/166 (65%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
+++ KE + A+A+ + + CS+CG++ DPC IC D RD SV+ VV++
Sbjct: 4 FYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICSDTSRDRSVLCVVQESK 63
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
D+ A+E+ + + LYHVL G++SP+D IGPEDI I L++R++ I E+I A + +EG
Sbjct: 64 DVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEG 123
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ TA YI L+ +K+TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 124 EATAMYISRLLRPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGR 169
>gi|300775556|ref|ZP_07085417.1| recombination protein R [Chryseobacterium gleum ATCC 35910]
gi|300505583|gb|EFK36720.1| recombination protein R [Chryseobacterium gleum ATCC 35910]
Length = 203
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 112/182 (61%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
++ +PG G ++A R LHL+K+ L ++ N+ N++ C C N D C IC
Sbjct: 15 ISGLPGIGRKTALRLALHLLKQPSSRAVSLGNSLINLVNEIKYCKECHNFSDFDVCEICS 74
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+++R+ +I +VEDV D+ A+E + Y +LGG +SP++ +GP + I S+ +++
Sbjct: 75 NEKRNGELICIVEDVRDVIAIENTGKYTGKYLILGGKISPMEGVGPGQLNIPSIEKKLNE 134
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
K++E IFA+SAT+EG TTA+YI K K +V + +A GI +G EL+Y D+ ++ +I
Sbjct: 135 GKVKEFIFALSATMEGDTTAYYIYKKFKNFNVNFSSIARGISVGDELEYADEISLGRSII 194
Query: 197 SR 198
+R
Sbjct: 195 NR 196
>gi|317131172|ref|YP_004090486.1| recombination protein RecR [Ethanoligenens harbinense YUAN-3]
gi|315469151|gb|ADU25755.1| recombination protein RecR [Ethanoligenens harbinense YUAN-3]
Length = 199
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ R+PG G ++A+R ++ + A+A+ + ++ C +C N+
Sbjct: 8 LSRLIEQFERLPGIGRKTAQRLAFFVLDGTNEQAKAFAQAILDAKGQMHTCKVCQNLTDG 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD + I VVED D+ A ER++ N LYHVL G +SP+D IGPE + I+
Sbjct: 68 EICTICGNPARDHTTICVVEDPRDVVAFERTRDYNGLYHVLHGVISPMDGIGPEQLHIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E+I A + +EG+ TA YI ++ + VK+TR+AYGIP+G EL+Y D+
Sbjct: 128 LLAR-AADGVQEIILATNPDVEGEATALYISRLIRPLGVKVTRIAYGIPVGGELEYADEI 186
Query: 190 TIFEAIRSRTVL 201
T+ A+ R+ L
Sbjct: 187 TLSRALEGRSEL 198
>gi|218132672|ref|ZP_03461476.1| hypothetical protein BACPEC_00532 [Bacteroides pectinophilus ATCC
43243]
gi|217992398|gb|EEC58401.1| hypothetical protein BACPEC_00532 [Bacteroides pectinophilus ATCC
43243]
Length = 198
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G +I LI+ L+ +PG G +SA+R H++ ++ + LA+ M N + V CS C +
Sbjct: 5 GSQITKLIEELSALPGVGAKSAQRLAFHIINMPKERVEQLAQTMVNARSNVRYCSECYAL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ C +C +R+ VI+VVE D+ A E++ + +YHVL G++SP IGP DI
Sbjct: 65 TDSELCPVCSSTKRNHKVIMVVESTRDMAAYEKTGKYDGVYHVLHGAISPALGIGPNDIK 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ LI R+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+
Sbjct: 125 LKELITRL-AGDVDEVIIATNSSLEGETTAMYISKLVKPTGIKVSRIASGVPVGGDLEYI 183
Query: 187 DDGTIFEAIRSR 198
D+ T+ A+ R
Sbjct: 184 DEVTLLRALEGR 195
>gi|110834634|ref|YP_693493.1| recombination protein RecR [Alcanivorax borkumensis SK2]
gi|123345433|sp|Q0VNM7|RECR_ALCBS RecName: Full=Recombination protein recR
gi|110647745|emb|CAL17221.1| recombination protein RecR [Alcanivorax borkumensis SK2]
Length = 200
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 109/189 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI +PG GPRSA+R L+ + + L +A+ + V C C N +
Sbjct: 7 VDQLINAFTCLPGVGPRSAQRMAYALLDRGRESGRRLGDALHAAMDGVQHCERCRNYAQS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RDAS++ +V D+ A E+S Y VL G LSPLD IGP ++G+
Sbjct: 67 TLCPVCEDPRRDASLVCIVATPGDVLAFEQSGEYRGQYFVLMGELSPLDGIGPRELGLDV 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ +I ELI A T+EG+ TAHY++ + V ++R+A G+PMG EL+++D
Sbjct: 127 LEQRLNEGQISELILATGTTVEGEATAHYVLGLAQDAGVGVSRIAQGVPMGGELEFVDGA 186
Query: 190 TIFEAIRSR 198
T+ +A++ R
Sbjct: 187 TLAQALKGR 195
>gi|301794653|emb|CBW37104.1| recombination protein RecR [Streptococcus pneumoniae INV104]
Length = 198
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + A+ + + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+DI ++S
Sbjct: 67 DPCSICTDPTRDQTTILVLEDSRDVATMENIQEYHGLYHVLHGLISPMNGISPDDINLKS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++Y D+
Sbjct: 127 LMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEV 186
Query: 190 TIFEAIRSRTVL 201
T+ AI +RT L
Sbjct: 187 TLLRAIENRTEL 198
>gi|163784538|ref|ZP_02179397.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
gi|159880193|gb|EDP73838.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
Length = 199
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K++ ++N I+ ++ +PG+G +SA+R +L+K + +++ + K+ C
Sbjct: 1 MEKQVLPSALQNAIEHISNLPGYGEKSAQRFVENLLKLPKGESIETIKSLLELLEKIHPC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICG + + C+IC ++R+ + I VVE+ D +A+E++ LYHVL G LSPL+ I
Sbjct: 61 KICGLLTENEICSICSSEERNKTTICVVEESFDAFAIEKTGKYTGLYHVLHGKLSPLEGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
ED+ I SL++R+E ++E+I A + T+EG+ TA YI + LK +V+I+R+AYG+P G
Sbjct: 121 TAEDLNISSLLDRLE--GVKEIIIATNPTVEGEATATYIYNLLKNKNVEISRIAYGLPFG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+ L+ D T+ +A+ + L
Sbjct: 179 ATLENADVFTLSKALEGKQKL 199
>gi|209694646|ref|YP_002262574.1| recombination protein RecR [Aliivibrio salmonicida LFI1238]
gi|226726301|sp|B6EJ44|RECR_ALISL RecName: Full=Recombination protein recR
gi|208008597|emb|CAQ78772.1| recombination protein RecR [Aliivibrio salmonicida LFI1238]
Length = 200
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R HL+++ Q LA+A++ +++ CS C
Sbjct: 7 LEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSECRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC++ +R + + +VE AD+ A+E + + Y VL G LSPLD IGP DIG+
Sbjct: 67 DTCAICLNPKRQMNGELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+PMG EL+ +D
Sbjct: 127 LLDHRLGRGDIKEVILATNPTVEGEATAHYIAEICQEHHVSASRIAHGVPMGGELELVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ +I R L
Sbjct: 187 TTLSHSILGRQKL 199
>gi|15639988|ref|NP_219441.1| recombination protein RecR [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189026227|ref|YP_001933999.1| recombination protein RecR [Treponema pallidum subsp. pallidum
SS14]
gi|6093950|sp|O83969|RECR_TREPA RecName: Full=Recombination protein recR
gi|3323328|gb|AAC65952.1| recombination protein (recR) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018802|gb|ACD71420.1| recombination protein RecR [Treponema pallidum subsp. pallidum
SS14]
gi|291060361|gb|ADD73096.1| recombination protein RecR [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 201
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 113/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE +++ L+R+PG G + A R HL+K+ LA +A ++ +V C CG
Sbjct: 5 IEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGAFCEG 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C D RD +I VVE D+ + L+HVLGG ++PL+ +GP+ + I +
Sbjct: 65 RTCALCTDASRDRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQLRIAA 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ +RE+I A++ T+EG TTA Y+ L V +TRLA GIP+G +L+Y+D
Sbjct: 125 LLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEYIDRT 184
Query: 190 TIFEAIRSRTVL 201
T+ ++R R L
Sbjct: 185 TLAHSLRGRRPL 196
>gi|91792785|ref|YP_562436.1| recombination protein RecR [Shewanella denitrificans OS217]
gi|123356908|sp|Q12PB3|RECR_SHEDO RecName: Full=Recombination protein recR
gi|91714787|gb|ABE54713.1| recombination protein RecR [Shewanella denitrificans OS217]
Length = 199
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R +L+++ ++ LAE++ N V C C
Sbjct: 7 VDELIQALKGLPGVGPKSAQRMAFNLLERDRKVGLKLAESLKNAMTDVGHCQSCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R AS VI VVE AD+ A+E N Y VL G LSPLD +GPE++G+
Sbjct: 67 SLCPICASHKRGASGVICVVETPADVLAIEAGGHFNGRYFVLLGHLSPLDGVGPEELGLS 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + ++ + ELI A + T+EG TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLEQHLQTLDVTELILATNPTVEGDATAHFIADMARRHKVIISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRIAL 199
>gi|225619843|ref|YP_002721100.1| recombination protein RecR [Brachyspira hyodysenteriae WA1]
gi|254790754|sp|C0QZV8|RECR_BRAHW RecName: Full=Recombination protein recR
gi|225214662|gb|ACN83396.1| recombination protein RecR [Brachyspira hyodysenteriae WA1]
Length = 201
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 118/193 (61%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L +I++R+PG G R+A R L+L ++ L ++ +++++ + LC +C ++
Sbjct: 5 QSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSDVLSSLHENIKLCQVCYSLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC + +R+ + I +VE D+ A+E+++ N +YH+LGG +SPL IG DI I
Sbjct: 65 DNDICDICSNDKREHNKICIVESYPDMLAIEKTEEYNGVYHILGGLISPLKGIGISDIRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDY 185
+ LIER+ I E++ A SA++E TTA YI LK + +ITR+ YGI + S+++
Sbjct: 125 KELIERVNNNSIEEIMIAFSASLEADTTASYIYKTLKDNNFNGRITRITYGISLASDIEN 184
Query: 186 LDDGTIFEAIRSR 198
D ++ +I R
Sbjct: 185 ADSRSLARSILDR 197
>gi|319787608|ref|YP_004147083.1| recombination protein RecR [Pseudoxanthomonas suwonensis 11-1]
gi|317466120|gb|ADV27852.1| recombination protein RecR [Pseudoxanthomonas suwonensis 11-1]
Length = 195
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 111/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H++++ + LA +A ++ C+ C +
Sbjct: 3 LEELIEAFRVLPGVGRKSAQRMAYHVLERGREGGKRLATVLAEAVERIGHCAQCRDFSED 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CA+C RD + VVE AD A+E + +Y VL G LSPLD +GP ++G+++
Sbjct: 63 EVCAVCASGSRDRQQLCVVETPADRLAIETATGYRGVYFVLQGRLSPLDGVGPRELGLET 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++ E+I A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 123 LGTRLAAGEVSEMIIATSATVEGEATAHYLAQLARQHGVRPSRLAQGLPLGGELEYVDRG 182
Query: 190 TIFEAIRSR 198
T+ A +R
Sbjct: 183 TLSHAFGTR 191
>gi|153815988|ref|ZP_01968656.1| hypothetical protein RUMTOR_02233 [Ruminococcus torques ATCC 27756]
gi|317500928|ref|ZP_07959138.1| recombination protein RecR [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089172|ref|ZP_08338075.1| recombination protein recR [Lachnospiraceae bacterium 3_1_46FAA]
gi|145846635|gb|EDK23553.1| hypothetical protein RUMTOR_02233 [Ruminococcus torques ATCC 27756]
gi|316897631|gb|EFV19692.1| recombination protein RecR [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405949|gb|EGG85475.1| recombination protein recR [Lachnospiraceae bacterium 3_1_46FAA]
Length = 198
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I LI+ +R+PG G +SA+R H++ + LA+++ + V C +C +
Sbjct: 6 NQISRLIEEFSRLPGIGSKSAQRLAFHVINMPLDQVEGLAKSIIDARKNVRYCKVCCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP DI +
Sbjct: 66 DRETCPICGNPDRDKKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D
Sbjct: 126 KELMERLQ-GDVNEVIIATNSSLEGETTAMYISKLIKPAGIKVSRIASGVPVGGDLEYID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ RT L
Sbjct: 185 EVTLLRALEGRTEL 198
>gi|91201432|emb|CAJ74492.1| strongly similar to recombination protein RecR [Candidatus Kuenenia
stuttgartiensis]
Length = 215
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 115/192 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + NLI ++PG G ++A R +++K+ LA A+ ++ + +C++C NV
Sbjct: 20 QTVNNLISEFGKMPGIGQKTAERLACYVLKQPVDDAMKLAYAIRDVKKYMKICTVCFNVS 79
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
PC IC + +RD+S+I VVE ADL +E++ N YH+L G +SPL+ I P+ + I
Sbjct: 80 ENSPCHICSNLRRDSSIICVVEQFADLLTIEKTGKYNGHYHILQGHISPLEGIDPDLLTI 139
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R++ ++E+I A + +EG TA YI +L+ VK+TR+A G+P GS L+Y +
Sbjct: 140 GRLLQRVKDGSVKEVILATNLNMEGDITAVYIHKQLQSFGVKVTRIARGLPTGSYLEYAN 199
Query: 188 DGTIFEAIRSRT 199
+ +A+ R
Sbjct: 200 TAIVADAVSDRN 211
>gi|326383523|ref|ZP_08205209.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395]
gi|326197607|gb|EGD54795.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395]
Length = 203
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI LA++PG GP+ A+R HL+ + + L A+ ++ + V C+ CGNV
Sbjct: 6 IQDLIDQLAKLPGLGPKGAQRIAFHLLAGENVEIDRLIAALGHVRDDVTFCTECGNVAAD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RDA+ I VVE+ D++A+ER+K + YHVLGG+L PL IGP+ + I+
Sbjct: 66 TLCRICGDARRDATKICVVEEPKDIYAIERTKEFDGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ ++ + + + E+I A EG+ TA Y++ LK + +TRLA G+PMG +L+
Sbjct: 126 LLRRLGDQPDGQDVSEIIVATDPNTEGEATATYLLRMLKDFPGLSVTRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R VL
Sbjct: 186 FADELTLGRALSGRRVL 202
>gi|296136310|ref|YP_003643552.1| recombination protein RecR [Thiomonas intermedia K12]
gi|295796432|gb|ADG31222.1| recombination protein RecR [Thiomonas intermedia K12]
Length = 203
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GP+SA R HL++ + +A A+ V C+ C +
Sbjct: 12 LDALIDALRHLPGVGPKSASRMAYHLLEHDREAAQHIARALDAALGAVQRCTRCNTLTED 71
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC D +RDA + VVE ADL A+E++ + LY VL G +SPLD +GP++IG+
Sbjct: 72 AVCSICADPRRDARQLCVVESPADLAAVEQTLTYHGLYFVLMGRISPLDGLGPKEIGLDR 131
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R + E+I A + T EG+ TAH I + L+ +++TRLA G+P G+EL+Y+D G
Sbjct: 132 LMTRALDGAVEEVILATNFTNEGEATAHVIAETLRPRGLRVTRLARGVPAGAELEYVDLG 191
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 192 TIARALVDR 200
>gi|288574938|ref|ZP_06393295.1| recombination protein RecR [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570679|gb|EFC92236.1| recombination protein RecR [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 203
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E LI +L R+PG G +SARR + + E LA+A ++ + +C ICGN+
Sbjct: 7 FERLIGLLKRLPGVGEKSARRMAFFVFQAPEGYSIELADAFLSLKKNLSVCEICGNLTDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC IC D RD S + VVE + DL ++E++ + LY+VLGG++SPLD + +
Sbjct: 67 QPCNICSDPLRDRSTLCVVEGIEDLLSIEQAGVYDGLYYVLGGTVSPLDGEDLPEGSLDG 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDD 188
LI IE ++ E+I A + +EG T H ++ LKG+ D+K +RL+YG+P+G +++ D
Sbjct: 127 LINMIERGRVSEVIVATNPRVEGDMTYHAVLSALKGMSDLKKSRLSYGLPVGGSIEFADR 186
Query: 189 GTIFEAIRSR 198
T+ A+ +R
Sbjct: 187 VTLHAAMETR 196
>gi|56460947|ref|YP_156228.1| recombinational DNA repair protein [Idiomarina loihiensis L2TR]
gi|73621491|sp|Q5QWR1|RECR_IDILO RecName: Full=Recombination protein recR
gi|56179957|gb|AAV82679.1| Recombinational DNA repair protein [Idiomarina loihiensis L2TR]
Length = 201
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L++ L R+PG G +SA+R HL+++ LAE++ + KV C C +
Sbjct: 7 IDQLVENLKRLPGVGQKSAQRMAFHLLERDRGGASRLAESLQSAVEKVGHCECCRTLTEE 66
Query: 70 DPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + +R+ V+ +VE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 PLCRICSNPMRRENGVLCIVETPADVLAIEQTSQFQGRYFVLMGHLSPLDGIGPADIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +++ + + E++ A + T+EG TAHYI D +++ TR+A+G+P+G EL Y+D
Sbjct: 127 ELERQLQSEPVEEIVLATNPTVEGDATAHYIADIAAQLNINTTRIAHGVPVGGELGYVDQ 186
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 187 TTLGHAFSGR 196
>gi|328946986|ref|YP_004364323.1| Recombination protein recR [Treponema succinifaciens DSM 2489]
gi|328447310|gb|AEB13026.1| Recombination protein recR [Treponema succinifaciens DSM 2489]
Length = 195
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 111/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L + +R+PG G +SA R HL+K + + ++ ++ CSICG
Sbjct: 4 LDELTESFSRLPGIGKKSAARIASHLLKTDSSFNIRFSNQILSLQERIKPCSICGAWTEE 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD +++ VVE D+ +E S + L+HVLGG +SPL+ I P+ + I
Sbjct: 64 DPCPICSDIARDKTILCVVEQPQDVATIESSHEFHGLFHVLGGVISPLEGITPDKLRISQ 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+++ I+E+I A + T+EG TTA +I L+ V +TRLA G+P G +L+Y D
Sbjct: 124 LLERVKLGVIKEVIIATNPTVEGDTTALFIQRVLQDTQVVVTRLASGLPAGGDLEYADRL 183
Query: 190 TIFEAIRSR 198
T+ + + R
Sbjct: 184 TLARSFQGR 192
>gi|285017410|ref|YP_003375121.1| recombination protein recr [Xanthomonas albilineans GPE PC73]
gi|283472628|emb|CBA15133.1| probable recombination protein recr [Xanthomonas albilineans]
Length = 204
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 111/190 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G ++A+R H+++++ LA+ + +V C+ C + T
Sbjct: 6 LEQLIEAFRILPGVGQKTAQRMAYHVLERERAGGQRLADTLHAAIARVGHCTQCRDFSET 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D CAIC RD + VVE AD A+E++ LY +L G LSPLD IGP ++G+
Sbjct: 66 DICAICASPGRDRQQLCVVESPADRLAIEQATGYRGLYFILQGRLSPLDGIGPRELGLDR 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++ ELI A ++T+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 126 LGARLAQGEVAELIIATNSTVEGEATAHYLAQLARQHGVRPSRLAQGLPLGGELEYVDRG 185
Query: 190 TIFEAIRSRT 199
T+ A SR
Sbjct: 186 TLSHAFGSRN 195
>gi|294340546|emb|CAZ88931.1| Recombination protein recR [Thiomonas sp. 3As]
Length = 203
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GP+SA R HL++ + +A A+ V C+ C +
Sbjct: 12 LDALIDALRHLPGVGPKSASRMAYHLLEHDREAAQHIARALDAALGAVQRCARCNTLTED 71
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC D +RDA + VVE ADL A+E++ + LY VL G +SPLD +GP++IG+
Sbjct: 72 AVCSICADPRRDARQLCVVESPADLAAVEQTLTYHGLYFVLMGRISPLDGLGPKEIGLDR 131
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R + E+I A + T EG+ TAH I + L+ +++TRLA G+P G+EL+Y+D G
Sbjct: 132 LMTRALDGAVEEVILATNFTNEGEATAHVIAETLRPRGLRVTRLARGVPAGAELEYVDLG 191
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 192 TIARALVDR 200
>gi|317406000|gb|EFV86278.1| recombination protein recR [Achromobacter xylosoxidans C54]
Length = 202
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 110/187 (58%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L R+PG G RSARR HL++ Q L A+A + CS C + D
Sbjct: 13 SLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLRHCSRCNSFAEEDV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
CA C + +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++ +I
Sbjct: 73 CATCANPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELDFDRVI 132
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R ++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+D GTI
Sbjct: 133 RRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYVDAGTI 192
Query: 192 FEAIRSR 198
A+ R
Sbjct: 193 AWALMER 199
>gi|291546692|emb|CBL19800.1| recombination protein RecR [Ruminococcus sp. SR1/5]
Length = 198
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L+ +PG G +SA+R H++ + + L ++ + V C C +
Sbjct: 7 HINKLIEQLSHLPGIGAKSAQRLAFHIMNMPKDQVEQLTASITDARQNVQYCKCCYTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +RD S I+VVE+ DL A E++ + +YHVL G++SP+ IGP+DI ++
Sbjct: 67 QELCPICANPKRDHSTIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPDDIKLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ ++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMKRLQ-GDVKEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLLRALEGRVEL 198
>gi|33595895|ref|NP_883538.1| recombination protein RecR [Bordetella parapertussis 12822]
gi|33565974|emb|CAE36525.1| recombination protein RecR [Bordetella parapertussis]
Length = 216
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L R+PG G RSARR HL++ Q L A++ + C+ C + + C
Sbjct: 28 LIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSGAVQHLRHCARCNSFTEDEVC 87
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
A C + +RD ++ +VE AD +E S LY+VL G ++PL+ +GP ++ Q +IE
Sbjct: 88 ATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEGVGPRELDFQRVIE 147
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R ++E+I A + T EG+TTAH++ D L +K+TRLA G+P GSEL+Y+D GTI
Sbjct: 148 RACDGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPAGSELEYVDAGTIA 207
Query: 193 EAIRSR 198
A+ R
Sbjct: 208 WALMER 213
>gi|33600426|ref|NP_887986.1| recombination protein RecR [Bordetella bronchiseptica RB50]
gi|73621469|sp|Q7WMF1|RECR_BORBR RecName: Full=Recombination protein recR
gi|73621470|sp|Q7WAY7|RECR_BORPA RecName: Full=Recombination protein recR
gi|33568025|emb|CAE31938.1| recombination protein RecR [Bordetella bronchiseptica RB50]
Length = 202
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L R+PG G RSARR HL++ Q L A++ + C+ C + + C
Sbjct: 14 LIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSGAVQHLRHCARCNSFTEDEVC 73
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
A C + +RD ++ +VE AD +E S LY+VL G ++PL+ +GP ++ Q +IE
Sbjct: 74 ATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEGVGPRELDFQRVIE 133
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R ++E+I A + T EG+TTAH++ D L +K+TRLA G+P GSEL+Y+D GTI
Sbjct: 134 RACDGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPAGSELEYVDAGTIA 193
Query: 193 EAIRSR 198
A+ R
Sbjct: 194 WALMER 199
>gi|299140392|ref|ZP_07033551.1| recombination protein RecR [Acidobacterium sp. MP5ACTX8]
gi|298597619|gb|EFI53798.1| recombination protein RecR [Acidobacterium sp. MP5ACTX8]
Length = 200
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 119/194 (61%), Gaps = 4/194 (2%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + LI L ++PG G ++A+R H+++ + LA+++ + + LCSIC N+
Sbjct: 6 AEPMARLIDELRKLPGVGTKTAQRYAFHILRSSDSDATTLADSIRALKQHLHLCSICNNI 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPCA C R+ +I VVE+ ++ A+E+++ +YHVL G+LSP++ +GPE +
Sbjct: 66 TDVDPCAYCTSPARNTHLICVVEEPTNINAIEKTRTYTGVYHVLHGTLSPVNGVGPEQLR 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIPMGSELD 184
+++L R+ + ELI A S T+EG+ TA Y++D ++ + I+R+A G+P GS+++
Sbjct: 126 LRNLWPRL--AEAEELILATSPTVEGEATARYLLDDIRKTHPTLHISRIATGVPAGSDIE 183
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A+ R
Sbjct: 184 YADEVTMTRALEGR 197
>gi|227542726|ref|ZP_03972775.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181492|gb|EEI62464.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51866]
Length = 207
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI +R+PG GP+SA+R HL+ ++ + L A+ + V C IC N+ +
Sbjct: 6 FQELIDEFSRLPGIGPKSAQRIAFHLINAEDDSVERLISALTGVVGGVSFCRICCNISSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + +RDA+ I VVE+ D+ +ER+ YHVLGG+L PL IGP+++ I
Sbjct: 66 EVCTICANPERDATTICVVEEPKDIQVIERTGEYTGRYHVLGGALDPLGGIGPKELNITQ 125
Query: 130 LIERI---------EVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPM 179
L+ R+ +V I E+I A EG+ TA Y+ LK + ++RLA G+P+
Sbjct: 126 LVRRVGGTLPDVSSDVPDIAEVILATDPNTEGEATASYLARLLKDFSGLTVSRLASGMPL 185
Query: 180 GSELDYLDDGTIFEAIRSR 198
G +L+++D+ T+ A+ R
Sbjct: 186 GGDLEFVDELTLSRALSGR 204
>gi|198283701|ref|YP_002220022.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667448|ref|YP_002426330.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226726300|sp|B5EJE1|RECR_ACIF5 RecName: Full=Recombination protein recR
gi|226737869|sp|B7JC18|RECR_ACIF2 RecName: Full=Recombination protein recR
gi|198248222|gb|ACH83815.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519661|gb|ACK80247.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 199
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L+ +L R+PG GPRSA+R + L+ +K L+ LA A + V C C N+
Sbjct: 7 MDALVALLRRLPGIGPRSAQRISYELLVRKRDLMPQLAAAFQQAHAVVRFCERCNNLSEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C + RD S++ VVE ADL A+E + + VL G LSPLD IGPE + I
Sbjct: 67 PLCAVCRSEHRDRSILCVVESPADLRAIEDTGVFVGEFFVLMGHLSPLDGIGPEALHIDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++E+IFA + T+EG+ TA ++ L V I+R+A G+P+G EL+Y+D
Sbjct: 127 LSARLGETDLQEVIFATNPTLEGEATAQFLA-GLVPDGVTISRIARGVPVGGELEYVDRS 185
Query: 190 TIFEAIRSRTVL 201
T+ A+ R +L
Sbjct: 186 TLGRALHGRRLL 197
>gi|111021188|ref|YP_704160.1| recombination protein RecR [Rhodococcus jostii RHA1]
gi|226363548|ref|YP_002781330.1| recombination protein RecR [Rhodococcus opacus B4]
gi|123340193|sp|Q0S8Y4|RECR_RHOSR RecName: Full=Recombination protein recR
gi|110820718|gb|ABG96002.1| recombination protein [Rhodococcus jostii RHA1]
gi|226242037|dbj|BAH52385.1| recombination protein RecR [Rhodococcus opacus B4]
Length = 202
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG V
Sbjct: 6 VQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRVRDGVQFCVVCGTVSDK 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 EHCRICADPRRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ RI ++ + E+I A EG+ TA Y++ L+ + ++RLA G+PMG +L+
Sbjct: 126 LLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADELTLGRALSGRRTL 202
>gi|296125711|ref|YP_003632963.1| recombination protein RecR [Brachyspira murdochii DSM 12563]
gi|296017527|gb|ADG70764.1| recombination protein RecR [Brachyspira murdochii DSM 12563]
Length = 203
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 118/193 (61%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L +I++R+PG G R+A R L+L E+ L A+ + +++ + LCS C ++
Sbjct: 7 QSLDKLTQIISRLPGIGGRTAMRLALYLFDCDEEYLKEFADTLYTLHDNIKLCSKCYSLS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC + +R+ + I VVE D+ A+E+++ N +YHVLGG ++PL IG DI I
Sbjct: 67 DNDICYICSNDKREHNKICVVETYPDMLAIEKTEEYNGVYHVLGGLIAPLKGIGISDIRI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAYGIPMGSELDY 185
+ LIER+ + I E++ A SA++E TTA YI LK + ++TR+ YGI + S+++
Sbjct: 127 KELIERVNTENIDEIMIAFSASLEADTTAGYIFKLLKDNNYTGRVTRITYGISLSSDIEN 186
Query: 186 LDDGTIFEAIRSR 198
D ++ +I R
Sbjct: 187 ADSRSLARSILDR 199
>gi|325003633|ref|ZP_08124745.1| recombination protein RecR [Pseudonocardia sp. P1]
Length = 205
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 114/200 (57%), Gaps = 8/200 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + L E + + V C +CGNV +
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQEVLQTVKQGVAFCEVCGNVSSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 TRCRYCSDARRDPALLCVVEEPKDVLAVERTREFKGRYHVLGGALDPLAGVGPDTLRIRE 125
Query: 130 LIERI-------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGS 181
L+ R+ + I E+I A EG+ TA Y++ L+ + +TRLA G+PMG
Sbjct: 126 LLARLGGTGPAQDETSISEVIIATDPNTEGEATATYLVRLLRDFPGLTVTRLASGLPMGG 185
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
+L++ D+ T+ A+ R L
Sbjct: 186 DLEFADEMTLGRALAGRRAL 205
>gi|298244235|ref|ZP_06968041.1| recombination protein RecR [Ktedonobacter racemifer DSM 44963]
gi|297551716|gb|EFH85581.1| recombination protein RecR [Ktedonobacter racemifer DSM 44963]
Length = 203
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A++PG G ++A+R T +++ LAEA+ + + CS C N+ TDPC
Sbjct: 11 LVEEFAKLPGIGVKTAQRLTFFILRSPNDHARRLAEAIIRVKESIIYCSRCFNITETDPC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + R+ V+ VVE+ D+ ALE++ A LYHVL G+LSP++ IG +++ I L++
Sbjct: 71 PICGNPSREQDVVCVVEEPLDVLALEKTGAYKGLYHVLHGALSPMNGIGRKELRIDELLK 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAH----YIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
R++ + IRE+IFA + EG TA YI ++L ++ +T LA G+P+G +L+Y D
Sbjct: 131 RLDHEHIREVIFATNPGFEGDYTAGSIKLYIKNELNLPELHMTSLARGLPIGGDLEYADQ 190
Query: 189 GTIFEAIRSRTVL 201
T+ AI R L
Sbjct: 191 DTLGRAIEGRREL 203
>gi|261415549|ref|YP_003249232.1| recombination protein RecR [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372005|gb|ACX74750.1| recombination protein RecR [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327932|gb|ADL27133.1| recombination protein RecR [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 198
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + +ENLI A +PG G ++ARR H++ +K+ + A+++ KV C C
Sbjct: 2 NVEPQSLENLISEFASLPGIGLKTARRLAYHMLSRKKGDVERFADSLMQAAEKVHPCPRC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
D C C ++ A I VVE +D+ ERS LY VLGG +SPLD IGPE
Sbjct: 62 HAFTDEDICPTCRARE-GAKSICVVEKNSDILPFERSSVHKGLYFVLGGVISPLDGIGPE 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ + L+ERI+ + I EL+ A+ ++ E +TA I L G++VK TRLA GIPMGS+L
Sbjct: 121 ALHLPQLVERIKAENIEELVLALGSSPEADSTALMIDRMLAGVNVKRTRLARGIPMGSDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+++D+ T+ A R L
Sbjct: 181 EFIDEVTMLRAFEGRVSL 198
>gi|330502979|ref|YP_004379848.1| recombination protein RecR [Pseudomonas mendocina NK-01]
gi|328917265|gb|AEB58096.1| recombination protein RecR [Pseudomonas mendocina NK-01]
Length = 199
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C ++
Sbjct: 7 IRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRCRSLSED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C+D++RD SV+ VVE D+ A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 EVCQLCLDERRDDSVLCVVEGPMDVHAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ERIE E+I A + T+EG+ TAHYI L G + +R+A+G+P+G EL+ +D G
Sbjct: 126 LLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLVASRIAHGMPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|71906447|ref|YP_284034.1| recombination protein RecR [Dechloromonas aromatica RCB]
gi|123628051|sp|Q47HW7|RECR_DECAR RecName: Full=Recombination protein recR
gi|71846068|gb|AAZ45564.1| RecR protein [Dechloromonas aromatica RCB]
Length = 199
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 113/191 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ L +A+ + + C C
Sbjct: 6 LESLIEALRCLPGIGPKSAQRMAYHLLQRDRPGAQRLGDAVLHALQAIRHCQRCNTFTEG 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C C +RD ++ VVE D+ +E++ +Y+VL G +SPLD +GP+++G+
Sbjct: 66 DICERCASPRRDPELLCVVETPVDMNMMEQTLTYRGMYYVLMGKISPLDGVGPKELGLDR 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E+I A + T EG+ TAHYI LK V +TR+A G+P+G EL+Y+D G
Sbjct: 126 LMTRALDGVVKEVILATNYTNEGEATAHYITAMLKPKGVGVTRIARGVPVGGELEYVDSG 185
Query: 190 TIFEAIRSRTV 200
T+ +A+R R +
Sbjct: 186 TLAQALRERKI 196
>gi|311108169|ref|YP_003981022.1| recombination protein RecR [Achromobacter xylosoxidans A8]
gi|310762858|gb|ADP18307.1| recombination protein RecR [Achromobacter xylosoxidans A8]
Length = 202
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 112/187 (59%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L R+PG G RSARR HL++ Q L A+A + C+ C + +
Sbjct: 13 SLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVQDLKHCARCNSFSEDEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C C++ +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++ + +I
Sbjct: 73 CGTCVNPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELDFERVI 132
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R ++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+D GTI
Sbjct: 133 KRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYVDAGTI 192
Query: 192 FEAIRSR 198
A+ R
Sbjct: 193 AWALMER 199
>gi|226944095|ref|YP_002799168.1| recombination protein RecR [Azotobacter vinelandii DJ]
gi|259563687|sp|C1DEK8|RECR_AZOVD RecName: Full=Recombination protein recR
gi|226719022|gb|ACO78193.1| RecR protein [Azotobacter vinelandii DJ]
Length = 199
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R LHL+++ LA+A+ V C C +
Sbjct: 7 IRQLIDALRILPGVGQKTAQRMALHLLERDRSGGLRLAQALTQALEHVGHCRQCRTLSED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVQGPMDVFAIEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+E E+I A + T+EG+ TAHYI L DV ++R+A+G+P+G EL+ +D G
Sbjct: 126 LLARVEQGAFEEVIIATNPTVEGEATAHYIAQTLASSDVTVSRIAHGVPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLSHALAGR 194
>gi|163846113|ref|YP_001634157.1| recombination protein RecR [Chloroflexus aurantiacus J-10-fl]
gi|222523849|ref|YP_002568319.1| recombination protein RecR [Chloroflexus sp. Y-400-fl]
gi|229890136|sp|A9WEA8|RECR_CHLAA RecName: Full=Recombination protein recR
gi|254790759|sp|B9LJ32|RECR_CHLSY RecName: Full=Recombination protein recR
gi|163667402|gb|ABY33768.1| recombination protein RecR [Chloroflexus aurantiacus J-10-fl]
gi|222447728|gb|ACM51994.1| recombination protein RecR [Chloroflexus sp. Y-400-fl]
Length = 204
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 118/198 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ + LI+ A++PG GP++A R T +L++ + + LA+A+ ++ +V C C
Sbjct: 7 QLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQVGYCRRC 66
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + CAIC+D RD + I VVE+ D+ A+ER+ A LYHVL G ++PL+ I E
Sbjct: 67 FNITVGELCAICLDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYRE 126
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L+ R+ + ++E+I A + EG+ TA ++ L + V++TR A G+P G +L
Sbjct: 127 DLKIEELLARVRSEPVQEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGGDL 186
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D T+ A R L
Sbjct: 187 EWADPETLGSAFEGRREL 204
>gi|34540960|ref|NP_905439.1| recombination protein RecR [Porphyromonas gingivalis W83]
gi|73621505|sp|Q7MV45|RECR_PORGI RecName: Full=Recombination protein recR
gi|34397275|gb|AAQ66338.1| recombination protein RecR [Porphyromonas gingivalis W83]
Length = 207
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 121/199 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K + + +E I A +PG G ++A R L+L+++ + A A+ ++ + C
Sbjct: 1 MIQKYSSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ +D C IC D RD S + VVE++ D+ A+E + LYHVLGG +SP+D I
Sbjct: 61 RHCHNISDSDVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++I E+I A+S T+EG TT ++ KL+ V+++ +A GI +G
Sbjct: 121 GPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLEPTGVRVSVIARGIAIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSILNRT 199
>gi|42527057|ref|NP_972155.1| recombination protein RecR [Treponema denticola ATCC 35405]
gi|73621527|sp|Q73MF9|RECR_TREDE RecName: Full=Recombination protein recR
gi|41817481|gb|AAS12066.1| recombination protein RecR [Treponema denticola ATCC 35405]
Length = 195
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ +I +R+PG G +SA R HL+K+ LAEA++ ++ K+ C+ICG+
Sbjct: 4 IDAVIDSFSRLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEKIHPCTICGSYTED 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D+ RD + I VV D+ + L+HVLGG ++PL+ IGP+ + I
Sbjct: 64 EICSICADETRDRATICVVGFPQDVNTISSIPEYRGLFHVLGGLIAPLEGIGPDQLHISE 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI I E+I A + TIEG TTA YI L+ + V ITRLA G+P+G +L+Y D
Sbjct: 124 LIRRIHEGGITEVILATNPTIEGDTTALYIQKILQDLPVNITRLASGLPVGGDLEYADRL 183
Query: 190 TIFEAIRSR 198
T+ ++ R
Sbjct: 184 TLARSLNGR 192
>gi|293607022|ref|ZP_06689366.1| recombination protein R [Achromobacter piechaudii ATCC 43553]
gi|292814619|gb|EFF73756.1| recombination protein R [Achromobacter piechaudii ATCC 43553]
Length = 202
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 112/187 (59%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+LI+ L R+PG G RSARR HL++ Q L A+A + C+ C + +
Sbjct: 13 SLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLKHCARCNSFSEEEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C C + +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++ + +I
Sbjct: 73 CGTCSNPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELDFERII 132
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R +++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+D GTI
Sbjct: 133 KRATDGEVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYVDAGTI 192
Query: 192 FEAIRSR 198
A+ R
Sbjct: 193 AWALMER 199
>gi|114778109|ref|ZP_01452996.1| recombination protein RecR [Mariprofundus ferrooxydans PV-1]
gi|114551527|gb|EAU54081.1| recombination protein RecR [Mariprofundus ferrooxydans PV-1]
Length = 204
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ ++++L+ +PG GP++A R L+L+ + LA+A+ ++ +V C +CG
Sbjct: 10 LARVVEMLSSLPGVGPKTAMRMGLNLLTRPAGDAAALAQALECLHEQVGFCPVCGCFSEQ 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C D RDA+ + VVE D+ +ER YHVL G LSP+D +GPE + + S
Sbjct: 70 GHCHFCDDPSRDAATLCVVEQPVDVLMMERGHGYRGSYHVLLGRLSPVDGVGPEQLRLAS 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R++ + I E+I A SAT++G+ TAHY+ ++ + V ++R++ G+P G EL+YLD+
Sbjct: 130 LDQRMK-QGINEIILATSATVDGEATAHYLANRYQHAGVSVSRISRGVPEGGELEYLDEH 188
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 189 TLSRALDQR 197
>gi|169351619|ref|ZP_02868557.1| hypothetical protein CLOSPI_02399 [Clostridium spiroforme DSM 1552]
gi|169291841|gb|EDS73974.1| hypothetical protein CLOSPI_02399 [Clostridium spiroforme DSM 1552]
Length = 197
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +NL+ R+PG G +SA R +++ ++ + ++ +A+I++ + C CG++
Sbjct: 5 RSFQNLVNCFKRLPGIGGKSAERLAYYILSMDKEYVDDFSKTLASIHDNIHYCKKCGHIC 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD SVI VVE+ D++A+E+ K N LYHVL G++S +D +D+ I
Sbjct: 65 EDEICDICKDKSRDQSVICVVEESKDVFAMEKVKEYNGLYHVLHGTMSIIDGKTMDDLNI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL R++ I+E+I A + T +G+TTA Y+ L ++ +R+A G+P+GS +DY D
Sbjct: 125 ASLFNRLD-DSIKEVIIATNPTRDGETTALYLAKLLAKRNINTSRIANGLPIGSNIDYAD 183
Query: 188 DGTIFEAIRSR 198
+ T+ +++ R
Sbjct: 184 ELTLLKSLEGR 194
>gi|197302303|ref|ZP_03167362.1| hypothetical protein RUMLAC_01030 [Ruminococcus lactaris ATCC
29176]
gi|197298734|gb|EDY33275.1| hypothetical protein RUMLAC_01030 [Ruminococcus lactaris ATCC
29176]
Length = 198
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI+ +R+PG G +SA+R H++ + LA A+ + V C C +
Sbjct: 7 QISRLIEEFSRLPGIGSKSAQRLAFHVINMPLDQVEGLANAIVDARKNVRYCKECCTLTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP DI ++
Sbjct: 67 QDVCPICSNPDRDKKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPGDIRLK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L+Y+D+
Sbjct: 127 ELMQRLQ-GDVDEVIIATNSSVEGETTAMYISKLIKPAGIKVSRIASGVPVGGDLEYIDE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ RT L
Sbjct: 186 VTLLRALDGRTEL 198
>gi|302390829|ref|YP_003826649.1| DNA replication and repair protein RecR [Acetohalobium arabaticum
DSM 5501]
gi|302202906|gb|ADL11584.1| DNA replication and repair protein RecR [Acetohalobium arabaticum
DSM 5501]
Length = 201
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 124/197 (62%), Gaps = 2/197 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K K I LI L ++PG GP+SA+R +++ ++ + L +A+ ++ +++ C +C
Sbjct: 2 KYYAKPIAKLIGKLTKLPGIGPKSAQRLAFYIMNDSDEEVEELVDAIKDVKDRIDYCEVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + +R+ SVI +VE D+ A+E++ N LYHVL GS+SP++ +GP+
Sbjct: 62 NNLTEHERCNICSNDERNRSVICIVESPKDIIAMEKTGEYNGLYHVLHGSISPMEGVGPD 121
Query: 124 DIGIQSLIER--IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
DI I+ L+ R E +++ E+I A +EG+ TA YI LK + + +R+A+G+P+G
Sbjct: 122 DIEIKGLLSRIEDEDEEVEEVILATDPNVEGEATAMYIARLLKPLGITASRIAHGLPVGG 181
Query: 182 ELDYLDDGTIFEAIRSR 198
+L+Y D+ T+ +A+ R
Sbjct: 182 DLEYADEVTLSKALEGR 198
>gi|229829734|ref|ZP_04455803.1| hypothetical protein GCWU000342_01831 [Shuttleworthia satelles DSM
14600]
gi|229791723|gb|EEP27837.1| hypothetical protein GCWU000342_01831 [Shuttleworthia satelles DSM
14600]
Length = 199
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 116/191 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+EI LI L+R+PG G +SA+R H+++ ++ + L +++ + V C C +
Sbjct: 6 REISQLIGALSRLPGIGSKSAQRLAFHILRMPKEEVDQLGKSLMDARANVRFCKECFTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC +R+ I+VVE DL A E++ +YHVL G++SP+ IGP DI +
Sbjct: 66 DQEICPICASDRRNHRQIMVVESTRDLAAYEKTGKYEGVYHVLHGAISPMQGIGPADIRM 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L R++ + + E+I A ++++EG+ TA YI +K +++TR+A G+P+G +L+Y+D
Sbjct: 126 KELFVRLQKEDVEEVIIATNSSLEGEATAMYISKLIKPTGIRVTRIASGVPVGGDLEYID 185
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 186 EVTLLRALDGR 196
>gi|33592643|ref|NP_880287.1| recombination protein RecR [Bordetella pertussis Tohama I]
gi|73621471|sp|Q7VY12|RECR_BORPE RecName: Full=Recombination protein recR
gi|33572289|emb|CAE41841.1| recombination protein RecR [Bordetella pertussis Tohama I]
gi|332382060|gb|AEE66907.1| recombination protein RecR [Bordetella pertussis CS]
Length = 202
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L R+PG G RSARR HL++ Q L A++ + C+ C + + C
Sbjct: 14 LIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSAAVQHLRHCARCNSFTEDEVC 73
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
A C + +RD ++ +VE AD +E S LY+VL G ++PL+ +GP ++ Q +IE
Sbjct: 74 ATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEGVGPRELDFQRVIE 133
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R ++E+I A + T EG+TTAH++ D L +K+TRLA G+P GSEL+Y+D GTI
Sbjct: 134 RACDGVVQEVILATNFTAEGETTAHFLDDALSERGLKVTRLARGVPAGSELEYVDAGTIA 193
Query: 193 EAIRSR 198
A+ R
Sbjct: 194 WALMER 199
>gi|325283369|ref|YP_004255910.1| Recombination protein recR [Deinococcus proteolyticus MRP]
gi|324315178|gb|ADY26293.1| Recombination protein recR [Deinococcus proteolyticus MRP]
Length = 198
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L+R+PG GP+SA+R HL ++ + + L+ A+ +++ C +C N+ + C
Sbjct: 10 LIRELSRLPGIGPKSAQRLAFHLFEQPAEDIERLSAALLAAKSELHTCPVCFNITDAELC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+C D RD ++I VVE+ D+ ALERS LYHVL G LSP++ +GPE + I+ L+
Sbjct: 70 DVCSDPSRDQNLICVVEEPGDVIALERSGEYQGLYHVLHGVLSPMNGVGPEQLHIKELLP 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R ++ E+I A T+EG TA Y+ L+ + +++R+AYG+ +GS L+Y D+ T+
Sbjct: 130 R--AREGLEVILATGTTVEGDATALYLQRLLEPLGAEVSRIAYGLQVGSALEYADEVTLG 187
Query: 193 EAIRSR 198
A+ R
Sbjct: 188 RALLGR 193
>gi|241668771|ref|ZP_04756349.1| recombination protein RecR [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877302|ref|ZP_05250012.1| recombination protein recR [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843323|gb|EET21737.1| recombination protein recR [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 201
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 117/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MNNQIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C ++ D C IC Q RD S + ++E + DL A+E + Y VL G +SPLD I
Sbjct: 61 KYCQSLTEKDVCDICSSQNRDESKLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I ++I E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPNELKLDILEQIIINREISEIILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLIHAFNART 198
>gi|171913849|ref|ZP_02929319.1| recombination protein RecR [Verrucomicrobium spinosum DSM 4136]
Length = 202
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI + +PG G RSA R L ++ + LA A+A + +V +C CG
Sbjct: 10 IRELILQMKSLPGIGQRSAERLVLWMMGRGHARAAELARALAQLEQRVGICPECGFFIER 69
Query: 70 DP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C +C +R +V+ VVE AD+ LERS A + YHVLGG LSPLD I P D+ I+
Sbjct: 70 DAACGLCQSDKRQTTVVCVVEQAADVLRLERSGAFSGQYHVLGGRLSPLDNITPSDLRIR 129
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ E+I A+SA +EG+ TA+Y+ D L+ + VK+TRLA G+P G LD++D+
Sbjct: 130 ELAARVPALGAEEVILALSADVEGEATANYLADILRPLGVKVTRLAQGMPAGGGLDHVDE 189
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R +
Sbjct: 190 MTLHHALSGRRAM 202
>gi|21230462|ref|NP_636379.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769544|ref|YP_244306.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992752|ref|YP_001904762.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. B100]
gi|24212228|sp|Q8PBW4|RECR_XANCP RecName: Full=Recombination protein recR
gi|81304501|sp|Q4URN7|RECR_XANC8 RecName: Full=Recombination protein recR
gi|21112026|gb|AAM40303.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574876|gb|AAY50286.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734512|emb|CAP52722.1| Recombination protein RecR [Xanthomonas campestris pv. campestris]
Length = 197
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 115/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H+++++ + LA A+AN KV C C + +
Sbjct: 5 LEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALANAVEKVGHCVQCRDFTES 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC + RD + VVE AD A+E + +Y +L G LSPLD IGP ++G+
Sbjct: 65 EVCAICANSGRDRQQLCVVESPADRLAIEHATGYRGVYFILQGRLSPLDGIGPRELGLDR 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 125 LAERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHSVRPSRLAQGMPLGGELEYVDRG 184
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 185 TLSHAFGTRS 194
>gi|209522076|ref|ZP_03270729.1| recombination protein RecR [Burkholderia sp. H160]
gi|209497485|gb|EDZ97687.1| recombination protein RecR [Burkholderia sp. H160]
Length = 198
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 108/189 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLRHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D++RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDEERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLTVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|32474297|ref|NP_867291.1| recombinant protein RecR [Rhodopirellula baltica SH 1]
gi|73621509|sp|Q7UQ68|RECR_RHOBA RecName: Full=Recombination protein recR
gi|32444835|emb|CAD74837.1| recombinant protein RecR [Rhodopirellula baltica SH 1]
gi|327539585|gb|EGF26194.1| recombination protein RecR [Rhodopirellula baltica WH47]
Length = 199
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 113/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +L+ L+++PG G +SA R HL++ E LA A+ + V CS+C N+ T
Sbjct: 8 VSDLVDQLSKLPGIGRKSAERLAFHLLRVHEDEALALASAIRRVRTDVRYCSVCYNLSET 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RDA+ + VVE DL +L+ S + LYHVL G ++PLD I P+ + I S
Sbjct: 68 ELCRICSDPKRDATRLCVVEQPRDLLSLDASGVYSGLYHVLLGRIAPLDGITPDQLTIDS 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ E+I A + T+EG T+ Y+ + ++ V+ITRLA GI GS L+Y +
Sbjct: 128 LVERVRTGNFSEIIMATNPTVEGDGTSLYLSNLMQEFPVEITRLARGITSGSVLEYANRE 187
Query: 190 TIFEAIRSRTVL 201
I +A+ R L
Sbjct: 188 IIADALTGRQRL 199
>gi|330718538|ref|ZP_08313138.1| recombination protein RecR [Leuconostoc fallax KCTC 3537]
Length = 201
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R + + + + ++++ + + C CG +
Sbjct: 7 IAKLIDNYTKLPGIGPKTATRLAFYTLGMDNEDVESFSKSLISAKKDLTFCDTCGMITEK 66
Query: 70 D--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D PC IC D+ R+ + VVE+ D+ A+E ++ + LYHVL G +SP GPEDI +
Sbjct: 67 DMNPCIICRDKSRNQGTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPEDINL 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SL+ R+ E ++I+E+I +A EG+ TA Y+ LK +K+TRLA+G+ +GS++DY
Sbjct: 127 PSLVRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIKVTRLAHGLSVGSDIDYA 186
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A++ RT L
Sbjct: 187 DELTLIKAVQGRTEL 201
>gi|323526147|ref|YP_004228300.1| recombination protein RecR [Burkholderia sp. CCGE1001]
gi|323383149|gb|ADX55240.1| recombination protein RecR [Burkholderia sp. CCGE1001]
Length = 198
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 107/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L A+ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDREGADKLGRALLFATEHLRHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D +RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDPERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|85712671|ref|ZP_01043717.1| Recombinational DNA repair protein [Idiomarina baltica OS145]
gi|85693521|gb|EAQ31473.1| Recombinational DNA repair protein [Idiomarina baltica OS145]
Length = 202
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L+ L R+PG G ++A+R HL+++ + LA+++ N +V C C +
Sbjct: 9 IDRLVDDLKRLPGVGKKTAQRMAFHLLERDREGAQRLADSLHNAVERVGHCQQCRTLTEE 68
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + R + + VVE AD+ A+E++ Y VL G LSPLD IGPEDIG+
Sbjct: 69 PLCRICANPARSEQGTLCVVETPADVLAIEQTSQFKGRYFVLMGHLSPLDGIGPEDIGLD 128
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +++ I E+I A + T+EG TAHYI D + ++V +R+A+G+P+G EL Y+D
Sbjct: 129 ELEAQLKSAVIEEIILATNPTVEGDATAHYIADIAESLNVNTSRIAHGVPVGGELGYVDQ 188
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 189 ATLGHAFTGR 198
>gi|237784774|ref|YP_002905479.1| recombination protein RecR [Corynebacterium kroppenstedtii DSM
44385]
gi|237757686|gb|ACR16936.1| recombination protein [Corynebacterium kroppenstedtii DSM 44385]
Length = 218
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 21/213 (9%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R HL+ + L A+ ++ + + C ICGN+
Sbjct: 6 LQDLIDEFSRLPGIGPKSAQRIAFHLLHTDPDDIDRLRAALTSVRDGITFCRICGNISRN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RDA+ I V+E+ D+ +E + YHVLGG+L PL +GP+D+ I
Sbjct: 66 DVCRICADPNRDATTICVIEEPKDIEVIEATGEYQGRYHVLGGALDPLANVGPKDLSITQ 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI + I+E+I A EG+ T+ Y+ LK D+
Sbjct: 126 LLQRIAGVLPDRETADSTPDEPRYEDAPTIKEVIIATDPNTEGEATSSYLARLLKDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+RLA G+P+G +L+Y+D+ T+ A+ R L
Sbjct: 186 TTSRLASGMPIGGDLEYVDELTLSRALAGRLPL 218
>gi|227487305|ref|ZP_03917621.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092731|gb|EEI28043.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51867]
Length = 207
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 112/199 (56%), Gaps = 10/199 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI +R+PG GP+SA+R HL+ ++ + L A+ + V C IC N+ +
Sbjct: 6 FQELIDEFSRLPGIGPKSAQRIAFHLINAEDDSVERLISALTGVVGGVSFCRICCNISSD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + +RDA+ I VVE+ D+ +ER+ YHVLGG+L PL IGP+++ I
Sbjct: 66 EVCTICANPERDATTICVVEEPKDIQVIERTGEYTGRYHVLGGALDPLGGIGPKELNITQ 125
Query: 130 LIERI---------EVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPM 179
L+ R+ V I E+I A EG+ TA Y+ LK + ++RLA G+P+
Sbjct: 126 LVRRVGGTLPDVSSGVPDIAEVILATDPNTEGEATASYLARLLKDFSGLTVSRLASGMPL 185
Query: 180 GSELDYLDDGTIFEAIRSR 198
G +L+++D+ T+ A+ R
Sbjct: 186 GGDLEFVDELTLSRALSGR 204
>gi|320333444|ref|YP_004170155.1| Recombination protein recR [Deinococcus maricopensis DSM 21211]
gi|319754733|gb|ADV66490.1| Recombination protein recR [Deinococcus maricopensis DSM 21211]
Length = 198
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 113/189 (59%), Gaps = 2/189 (1%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L+R+PG GP+SA+R HL ++ + LA A+ + + C C N+ + C
Sbjct: 10 LIRELSRLPGVGPKSAQRLAFHLFEQPREDTERLASAIMSAKRDLHTCPKCFNITDREFC 69
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+C D RD +I VVE+ DL A+ERS LYHVL G++SP++ +GP+ + I+ L+
Sbjct: 70 DVCTDPARDQELICVVEEPGDLIAIERSGEYRGLYHVLHGAISPMNGVGPDKLMIKPLLP 129
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ E+I A S T+EG+ T+ Y+ L+ + ++R+AYG+P+G L+Y D+ T+
Sbjct: 130 RVAAGM--EVILATSTTVEGEATSLYLQRLLEPLGATVSRIAYGLPVGGALEYADEVTLG 187
Query: 193 EAIRSRTVL 201
A+ R L
Sbjct: 188 RALTGRQRL 196
>gi|217969822|ref|YP_002355056.1| recombination protein RecR [Thauera sp. MZ1T]
gi|217507149|gb|ACK54160.1| recombination protein RecR [Thauera sp. MZ1T]
Length = 197
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 119/194 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ ++ LI+ L +PG GP+SA+R HL+++ ++ L A+ + + C+ C
Sbjct: 1 MSPSSLDELIEALRCLPGVGPKSAQRMAYHLLQRDQRGAARLGNALLHALEVLRHCARCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C C + +RDA+++ VVE ADL +E++++ N LY+VL G LSPLD +GP +
Sbjct: 61 SFTEDEVCPRCANPRRDAALLCVVEMPADLAMIEQTQSYNGLYYVLMGRLSPLDGVGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + LI R + +RE+I A + T EG+ TAH + L VK++RL+ G+P+G EL+
Sbjct: 121 LRLDKLIARATEEGVREVILATNFTNEGEATAHTVASLLGARGVKVSRLSRGVPVGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
+ D GTI +A+ R
Sbjct: 181 HTDIGTIGQALIER 194
>gi|54022259|ref|YP_116501.1| recombination protein RecR [Nocardia farcinica IFM 10152]
gi|73621501|sp|Q5Z354|RECR_NOCFA RecName: Full=Recombination protein recR
gi|54013767|dbj|BAD55137.1| putative recombination and repair protein [Nocardia farcinica IFM
10152]
Length = 202
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL++ + + L A+ + + V C +CG V
Sbjct: 6 VQDLIDELGKLPGVGPKSAQRIAFHLLQVEPPEIDRLQAALQKVRDGVQFCVVCGTVSDG 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + I+
Sbjct: 66 ELCRICADPRRDRTMICVVEEPKDVQAIERTREFRGRYHVLGGALDPLSGVGPDQLRIRE 125
Query: 130 LIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ RI + + E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L+
Sbjct: 126 LLARIGNQDDGVDVAEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADELTLGRALSGRRAL 202
>gi|312796077|ref|YP_004028999.1| Recombination protein recR [Burkholderia rhizoxinica HKI 454]
gi|312167852|emb|CBW74855.1| Recombination protein recR [Burkholderia rhizoxinica HKI 454]
Length = 200
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 106/186 (56%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L +PG GP+SA+R HL++ L ++ + + C C D C
Sbjct: 12 LIEALRTLPGVGPKSAQRIAYHLMQHDRDGAQRLGRSLLHATQALKHCERCNTFTERDVC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+C D+QRD +++ VVE AD LE++ A LY VL G LSPLD IGP +I + L+
Sbjct: 72 ELCSDEQRDPTLLCVVETPADQVMLEQTLAYCGLYFVLMGRLSPLDGIGPREIHFERLMR 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R + E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D GTI
Sbjct: 132 RATDGVVSEVVLATNFTNEGEATAHYLGQMLKARGLTVTRLARGVPVGGELEYVDAGTIA 191
Query: 193 EAIRSR 198
A+ R
Sbjct: 192 RAVLDR 197
>gi|309775006|ref|ZP_07670021.1| recombination protein RecR [Erysipelotrichaceae bacterium 3_1_53]
gi|308917224|gb|EFP62949.1| recombination protein RecR [Erysipelotrichaceae bacterium 3_1_53]
Length = 222
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+ E L++ +PG G ++A R ++ E+ + A N + C +CGN+
Sbjct: 4 KKFEALVECYRGLPGVGIKTAERYAFQTLEWDEETMDAWISAFENAKEGLKKCEVCGNLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D R++ +I VV+ D+ A+E++K +YHVL G +S I PEDI I
Sbjct: 64 ENDKCDICDDHSRNSQIICVVQSPKDVIAMEKTKEYAGVYHVLNGVISTSKGILPEDINI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ RI + +E+I A + T+EG+TTA Y+ L+ V +TR+A+G+PMG LDY D
Sbjct: 124 DSLLSRI-TDETQEIIIATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLDYAD 182
Query: 188 DGTIFEAIRSR 198
+ T+ +AI R
Sbjct: 183 ELTLIKAIEGR 193
>gi|145588887|ref|YP_001155484.1| recombination protein RecR [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189029366|sp|A4SWQ6|RECR_POLSQ RecName: Full=Recombination protein recR
gi|145047293|gb|ABP33920.1| DNA replication and repair protein RecR [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 204
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L +PG GP+SA+R +L++ LA+++ + V C+ C T C
Sbjct: 14 LIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVDTVGHCARCNTFSETQIC 73
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+ C D +RD S++ +VE AD +E++ + Y VL G +SPLD +GP +I L+
Sbjct: 74 STCADGRRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRISPLDGMGPNEIHFDRLLT 133
Query: 133 RIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
RIE IRE++ A + T EG+ TAHYI + LK +K+TR+A GIP+G EL+Y+D
Sbjct: 134 RIENPDTGVPIREVVLATNFTSEGEATAHYIGEVLKAKGIKVTRIARGIPVGGELEYVDA 193
Query: 189 GTIFEAIRSR 198
GT+ A+ R
Sbjct: 194 GTLARALMDR 203
>gi|302343840|ref|YP_003808369.1| recombination protein RecR [Desulfarculus baarsii DSM 2075]
gi|301640453|gb|ADK85775.1| recombination protein RecR [Desulfarculus baarsii DSM 2075]
Length = 192
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
+ L R+PG G ++A R LHL + + + LA A+A + +V C+ C N+ DPCA
Sbjct: 1 MGALCRLPGIGRKTAERLALHLARARPEEARALAAAVARVGAEVNTCARCRNLADRDPCA 60
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC D RD+ ++ VVE ADL A+E + A LY VL G+LSPLD +GP +G+ +L R
Sbjct: 61 ICADPARDSGLLCVVESPADLAAMEAAGAYRGLYFVLSGALSPLDGVGPGQLGLDALTRR 120
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ +RELI A ++T+EG+ TA + L + I+RL YG+P+G +L Y+D TI
Sbjct: 121 -AAEGVRELIIATNSTVEGEATADLVAQSLARPGLLISRLGYGMPVGGDLKYIDGLTIAR 179
Query: 194 AIRSR 198
A+ SR
Sbjct: 180 ALESR 184
>gi|146307667|ref|YP_001188132.1| recombination protein RecR [Pseudomonas mendocina ymp]
gi|166221955|sp|A4XVN4|RECR_PSEMY RecName: Full=Recombination protein recR
gi|145575868|gb|ABP85400.1| recombination protein RecR [Pseudomonas mendocina ymp]
Length = 199
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C ++
Sbjct: 7 IRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRCRSLSED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C+D++RD S++ VVE D+ A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 EVCQLCLDERRDDSLLCVVEGPMDVHAVEQT-GFRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ERIE E+I A + T+EG+ TAHYI L G + +R+A+G+P+G EL+ +D G
Sbjct: 126 LLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLIASRIAHGMPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|295676460|ref|YP_003604984.1| recombination protein RecR [Burkholderia sp. CCGE1002]
gi|295436303|gb|ADG15473.1| recombination protein RecR [Burkholderia sp. CCGE1002]
Length = 198
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 108/189 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLRHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D++RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDEERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|258545553|ref|ZP_05705787.1| recombination protein RecR [Cardiobacterium hominis ATCC 15826]
gi|258519253|gb|EEV88112.1| recombination protein RecR [Cardiobacterium hominis ATCC 15826]
Length = 201
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG G ++A+R L L+ + Q LA+A+ + + C C N+
Sbjct: 7 FDQLVQALTCLPGVGNKTAQRMALRLLLDQPQKAKQLADAIDHALHTAQRCHKCRNISDA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC + +RDAS + VVE AD+ A+E+S Y VL G +SPLD IGP ++G+
Sbjct: 67 DLCLICANPKRDASTLCVVEAPADVLAIEQSTDYRGQYFVLMGHISPLDGIGPIELGMDI 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ++ I+EL+ A ++T+EG+TTA+++ + +V TRLA+G+PMG EL Y+D
Sbjct: 127 LDRQLATGDIKELVLATNSTLEGETTAYFLAELAAKHNVPATRLAHGVPMGGELAYIDKS 186
Query: 190 TIFEAIRSRT 199
T+ A +R+
Sbjct: 187 TLSLAFNTRS 196
>gi|331005545|ref|ZP_08328919.1| Recombination protein RecR [gamma proteobacterium IMCC1989]
gi|330420647|gb|EGG94939.1| Recombination protein RecR [gamma proteobacterium IMCC1989]
Length = 218
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ LI L +PG G +SA+R LHL+++ + G L A+ KV C C +
Sbjct: 6 IDELIHSLCCLPGVGRKSAQRMALHLLERDPEGAGRLVGALGTAIEKVGRCLHCRILTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC +Q+R+ ++ VVE AD+ A+E+S Y VL G LSP+D IGP+++G+
Sbjct: 66 PVCYICSNQRRNTGLLCVVETPADVVAIEQSGTYQGKYFVLNGRLSPIDGIGPKELGLPQ 125
Query: 130 LIER---------------IEVKK------IRELIFAISATIEGQTTAHYIMDKLKGIDV 168
L +R +EV+K + ELI A + T+EG+ TA+YI ++ + +
Sbjct: 126 LFQRLRQEQQVTSQADEAEVEVEKDNANAPVTELILATNPTVEGEATAYYIAEQARQCGI 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
++R+A+G+P+G EL+Y+D GT+ A SR
Sbjct: 186 TVSRIAHGVPLGGELEYIDGGTLTHAFSSR 215
>gi|167855376|ref|ZP_02478143.1| recombination protein RecR [Haemophilus parasuis 29755]
gi|167853524|gb|EDS24771.1| recombination protein RecR [Haemophilus parasuis 29755]
Length = 201
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ LA+A++ + C C
Sbjct: 7 LENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC + +R S + VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DECAICQNYRRQISGQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + +E+I A ++TIEG TA+YI + ++K+TR+A+GIP+GSEL+ +D
Sbjct: 127 LLQKRLEEESFQEVILATNSTIEGDATANYIAEMCSIHNIKVTRIAHGIPVGSELEMVDG 186
Query: 189 GTIFEAIRSR 198
++ + R
Sbjct: 187 TSLSHSFVGR 196
>gi|89073486|ref|ZP_01160009.1| recombination protein RecR [Photobacterium sp. SKA34]
gi|90580019|ref|ZP_01235827.1| recombination protein RecR [Vibrio angustum S14]
gi|89050750|gb|EAR56231.1| recombination protein RecR [Photobacterium sp. SKA34]
gi|90438904|gb|EAS64087.1| recombination protein RecR [Vibrio angustum S14]
Length = 199
Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ Q LA+A++ ++ C C
Sbjct: 3 TSHLLEHLMEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLADALSQAMTEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + +I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEDDVCAICENPRRQENGLICVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R++ + I E+I A + T+EG+ TAHYI + DV +R+A+G+P+G EL+
Sbjct: 123 IGLDRLENRLQHENISEIILATNPTVEGEATAHYIAELCHEYDVPASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLAGRQRL 199
>gi|94985613|ref|YP_604977.1| recombination protein RecR [Deinococcus geothermalis DSM 11300]
gi|166221935|sp|Q1IY76|RECR_DEIGD RecName: Full=Recombination protein recR
gi|94555894|gb|ABF45808.1| recombination protein RecR [Deinococcus geothermalis DSM 11300]
Length = 222
Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI+ L+R+PG GP+SA+R +L ++ + + LA A+ + C +C N+ +
Sbjct: 9 GLIRELSRLPGIGPKSAQRLAFYLFEQPREDIERLAGAILEAKRDLHTCPVCFNITDAER 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD SVI VVE+ D+ A+ERS LYHVL G+LSP++ +GP+ + I+ L+
Sbjct: 69 CDVCSDPTRDQSVICVVEEPGDVIAIERSGEYRGLYHVLHGALSPMNGVGPDRLQIRPLL 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R V+ E+I A T+EG TA Y+ L+ + ++R+AYG+P+G L+Y D+ T+
Sbjct: 129 PR--VQDGMEVILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGALEYADEVTL 186
Query: 192 FEAIRSR 198
A+ R
Sbjct: 187 GRALSGR 193
>gi|152978672|ref|YP_001344301.1| recombination protein RecR [Actinobacillus succinogenes 130Z]
gi|171704263|sp|A6VN19|RECR_ACTSZ RecName: Full=Recombination protein recR
gi|150840395|gb|ABR74366.1| recombination protein RecR [Actinobacillus succinogenes 130Z]
Length = 200
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ LA A+ + +K+ CS C
Sbjct: 7 LENLVEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLARALTDAMSKIGHCSQCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ CAIC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 ETCAICDNPRRQHSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + E+I A + TIEG TA+YI + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQQRLQNEHFHEVILATNPTIEGDATANYIAEMCMQRNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLTHSFLGRREL 199
>gi|119713123|gb|ABL97192.1| recombination protein RecR [uncultured marine bacterium EB0_49D07]
Length = 195
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 2/187 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI+ L +PG G +SA+R L L+ K + LA+ + + C +C + +
Sbjct: 8 ELIEALTILPGVGKKSAQRMALFLLDKNKDGAVHLAKTLEECLETIQRCEVCRQLTSEPI 67
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D RD + VVE +D+ A+E + Y VL G LSP+D I P+D+GI L+
Sbjct: 68 CRICSDSSRDVYSLCVVESPSDVLAIESTGGFKGRYFVLMGRLSPIDGISPDDLGIPDLL 127
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
I+ +I E+I A S+T+EG TA +I D L+ VK++R++YGIP+G EL+Y+D TI
Sbjct: 128 RHIQHTQIEEVILATSSTVEGDATASFIKDHLQS--VKVSRISYGIPIGGELEYVDGNTI 185
Query: 192 FEAIRSR 198
AI+ R
Sbjct: 186 ARAIQGR 192
>gi|313606312|gb|EFR83260.1| recombination protein RecR [Listeria monocytogenes FSL F2-208]
Length = 144
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 96/140 (68%)
Query: 59 LCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
CS+CG++ DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D
Sbjct: 2 FCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMD 61
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
IGPEDI I L++R++ I E+I A + +EG+ TA YI LK +K+TR+A+G+P
Sbjct: 62 GIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLP 121
Query: 179 MGSELDYLDDGTIFEAIRSR 198
+G +L+Y D+ T+ +A+ R
Sbjct: 122 VGGDLEYADEVTLSKAMEGR 141
>gi|295094178|emb|CBK83269.1| recombination protein RecR [Coprococcus sp. ART55/1]
Length = 199
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 114/198 (57%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ G E+ LI+ L R+PG G ++A+R H++ E+ L++A+ N + CS C
Sbjct: 2 EVYGGEVNRLIEGLGRLPGIGSKTAQRLAFHIISMPEERALALSDAIVNAKKNIKYCSCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC R+ VI+VVE DL A ER+ + +YHVL G ++P IGP
Sbjct: 62 YTITDREVCPICSSPNRNHKVIMVVETPRDLAAYERTGQFDGVYHVLHGVINPALGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I L+ R++ + + ELI A + EG+ TA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRISELMRRLQNEDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R L
Sbjct: 182 ECIDEVTLLRALEGRVYL 199
>gi|170726148|ref|YP_001760174.1| recombination protein RecR [Shewanella woodyi ATCC 51908]
gi|238688704|sp|B1KNK2|RECR_SHEWM RecName: Full=Recombination protein recR
gi|169811495|gb|ACA86079.1| recombination protein RecR [Shewanella woodyi ATCC 51908]
Length = 199
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 7 VDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGQSLASALSSAMSDVGHCQACRTFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R ++ VI VVE AD+ A+E + Y VL G LSPLD +GPE++G+
Sbjct: 67 TLCPICASHKRGNSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLS 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + ++ ELI A + T+EG TAH+I D KG V ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEAHLASGEVSELILATNPTVEGDATAHFIADMAKGHQVSVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|28895691|ref|NP_802041.1| recombination protein [Streptococcus pyogenes SSI-1]
gi|28810940|dbj|BAC63874.1| putative recombination protein [Streptococcus pyogenes SSI-1]
Length = 164
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 99/146 (67%)
Query: 56 KVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115
++ CSICGN+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +S
Sbjct: 19 ELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLIS 78
Query: 116 PLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
P++ +GP+DI ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA
Sbjct: 79 PMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLAR 138
Query: 176 GIPMGSELDYLDDGTIFEAIRSRTVL 201
G+ +GS+++Y D+ T+ AI +RT L
Sbjct: 139 GLAVGSDIEYADEVTLLRAIENRTEL 164
>gi|332678503|gb|AEE87632.1| Recombination protein RecR [Francisella cf. novicida Fx1]
Length = 200
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 117/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R TL+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLTLYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNART 198
>gi|38232884|ref|NP_938651.1| recombination protein RecR [Corynebacterium diphtheriae NCTC 13129]
gi|73621480|sp|Q6NJY0|RECR_CORDI RecName: Full=Recombination protein recR
gi|38199142|emb|CAE48766.1| recombination protein [Corynebacterium diphtheriae]
Length = 218
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 115/213 (53%), Gaps = 21/213 (9%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI +R+PG GP+SA+R HL+ + + L +A+ I + V C IC N+
Sbjct: 6 LQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD S I VVE+ D+ +ER+ YHVLGGSL PL IGP ++ I
Sbjct: 66 EVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRELNISQ 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI ++RE+I A EG+ TA Y+ L+ D+
Sbjct: 126 LLQRIGGVLPDRELADSTPETPLYDASPEVREVILATDPNTEGEATASYLARLLRDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 186 VVSRLASGMPLGGDLEFVDELTLSRALSGRLTL 218
>gi|313205704|ref|YP_004044881.1| recombination protein recr [Riemerella anatipestifer DSM 15868]
gi|312445020|gb|ADQ81375.1| recombination protein RecR [Riemerella anatipestifer DSM 15868]
gi|315022900|gb|EFT35924.1| recombination protein RecR [Riemerella anatipestifer RA-YM]
gi|325336853|gb|ADZ13127.1| Recombinational DNA repair protein (RecF pathway) [Riemerella
anatipestifer RA-GD]
Length = 202
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 119/191 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +E ++ ++ +PG G +SA R LHL+++ L +A+ N+ ++ C C N
Sbjct: 6 KVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKECHNFS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TD C IC D R A ++ VVEDV D+ A+E + Y VLGG +SP++ IGP+ + I
Sbjct: 66 DTDICEICADDSRHAELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGPQQLNI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
++L ++E+ +I E+IFA+SAT+EG TT +Y+ K K D+K + +A GI +G EL+Y D
Sbjct: 126 ETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKKFKHFDIKFSNIARGISVGDELEYAD 185
Query: 188 DGTIFEAIRSR 198
+ ++ +I +R
Sbjct: 186 EVSLGRSILNR 196
>gi|19551495|ref|NP_599497.1| recombination protein RecR [Corynebacterium glutamicum ATCC 13032]
gi|62389142|ref|YP_224544.1| recombination protein RecR [Corynebacterium glutamicum ATCC 13032]
gi|24212182|sp|Q8NTQ8|RECR_CORGL RecName: Full=Recombination protein recR
gi|21323008|dbj|BAB97637.1| Recombinational DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|41324475|emb|CAF18815.1| DNA repair protein (RecF pathway) [Corynebacterium glutamicum ATCC
13032]
Length = 218
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R HL+ + L EA+ + + V C IC N+
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD I VVE+ D+ +ER+ + YHVLGG+L PL IGP ++ I +
Sbjct: 66 EVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNIST 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI +RE+I A EG+ TA Y+ LK D+
Sbjct: 126 LLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLKDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
I+RLA G+P+G +L+++D+ T+ A+ R
Sbjct: 186 VISRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|254480509|ref|ZP_05093756.1| recombination protein RecR [marine gamma proteobacterium HTCC2148]
gi|214039092|gb|EEB79752.1| recombination protein RecR [marine gamma proteobacterium HTCC2148]
Length = 172
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%)
Query: 32 TLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDV 91
TLHL+++ + LA A+ + +K+ CS C N D C IC D +RD S I VVE
Sbjct: 2 TLHLLERDREGASELAGALQSAVDKIDHCSRCRNFTELDVCEICADIKRDVSTICVVETP 61
Query: 92 ADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIE 151
AD+ A+E+S + +Y VL G LSP+D IGP +IG+ +R+ + I E+I A + T+E
Sbjct: 62 ADVLAVEQSGSFRGIYFVLMGHLSPIDGIGPAEIGLDKFQQRVVDEGIEEVILATNPTVE 121
Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
G+ TA+Y+ D L+ V ++R+A+G+P+G EL+Y+D T+ A R
Sbjct: 122 GEATAYYLSDALQRQGVNVSRIAHGVPLGGELEYVDGSTLAHAFSGR 168
>gi|307729578|ref|YP_003906802.1| recombination protein RecR [Burkholderia sp. CCGE1003]
gi|307584113|gb|ADN57511.1| recombination protein RecR [Burkholderia sp. CCGE1003]
Length = 198
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ L A+ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QVCEVCLDPERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLTVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|325474111|gb|EGC77299.1| recombination protein recR [Treponema denticola F0402]
Length = 195
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+++I + +PG G +SA R HL+K+ LAEA++ ++ K+ C+ICG+
Sbjct: 4 IDSVIDSFSLLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEKIHPCTICGSYTED 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D+ RD + I VV D+ + L+HVLGG ++PL+ IGP+ + I
Sbjct: 64 EICSICADETRDRATICVVGFPQDVNTISSIPEYRGLFHVLGGLIAPLEGIGPDQLHISE 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI RI I E+I A + TIEG TTA YI L+ + V ITRLA G+P+G +L+Y D
Sbjct: 124 LIRRIHEGGITEVILATNPTIEGDTTALYIQKILQDLPVNITRLASGLPVGGDLEYADRL 183
Query: 190 TIFEAIRSR 198
T+ ++ R
Sbjct: 184 TLARSLNGR 192
>gi|54113491|gb|AAV29379.1| NT02FT0742 [synthetic construct]
Length = 200
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 117/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ AI +RT
Sbjct: 180 GELEYLDQQTLLHAINART 198
>gi|262276242|ref|ZP_06054051.1| recombination protein RecR [Grimontia hollisae CIP 101886]
gi|262220050|gb|EEY71366.1| recombination protein RecR [Grimontia hollisae CIP 101886]
Length = 200
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ Q L+EA+ + + C C
Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFHLLQRNRQGGVKLSEALLSAMTDIGHCEKCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEECAICANPRRQENGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + I ELI A + T+EG+ TAHYI + V +R+A+G+PMG EL+
Sbjct: 123 IGLDLLEKRLSSESISELILATNPTVEGEATAHYISELCSEHGVIASRIAHGVPMGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ +I R L
Sbjct: 183 LVDGTTLSHSIIGRHRL 199
>gi|219850062|ref|YP_002464495.1| recombination protein RecR [Chloroflexus aggregans DSM 9485]
gi|254790758|sp|B8G7M4|RECR_CHLAD RecName: Full=Recombination protein recR
gi|219544321|gb|ACL26059.1| recombination protein RecR [Chloroflexus aggregans DSM 9485]
Length = 205
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 113/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ AR+PG GP++A R T +L++ + + LA+A+ ++ +V C C N+
Sbjct: 14 VARLIEEFARLPGIGPKTASRLTFYLLRAEPKQAQALAQAILDVKAQVGYCRRCFNITVD 73
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD + I VVE+ D+ A+ER+ A LYHVL G ++PL+ I ED+ I
Sbjct: 74 ELCPICRDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLKIDE 133
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LI R+ + + E+I A + EG+ TA ++ L + V++TR A G+P G +L++ D
Sbjct: 134 LIARVRSEPVNEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGGDLEWADPE 193
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 194 TLGSALEGRREL 205
>gi|219871233|ref|YP_002475608.1| recombination protein RecR [Haemophilus parasuis SH0165]
gi|254790770|sp|B8F5Q8|RECR_HAEPS RecName: Full=Recombination protein recR
gi|219691437|gb|ACL32660.1| recombination protein RecR [Haemophilus parasuis SH0165]
Length = 201
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ LA+A++ + C C
Sbjct: 7 LENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC + +R S + VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DECAICQNYRRQISGQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + +E+I A + TIEG TA+YI + ++K+TR+A+GIP+GSEL+ +D
Sbjct: 127 LLQKRLEEESFQEVILATNPTIEGDATANYIAEMCSIHNIKVTRIAHGIPVGSELEMVDG 186
Query: 189 GTIFEAIRSR 198
++ + R
Sbjct: 187 TSLSHSFVGR 196
>gi|194246448|ref|YP_002004087.1| Recombinational DNA repair protein [Candidatus Phytoplasma mali]
gi|254790778|sp|B3R068|RECR_PHYMT RecName: Full=Recombination protein recR
gi|193806805|emb|CAP18232.1| Recombinational DNA repair protein [Candidatus Phytoplasma mali]
Length = 206
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 116/196 (59%), Gaps = 9/196 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLV--KKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E LI+ +PG G ++A R T L+ K K ++L L++ + + N + C+ICG +
Sbjct: 7 VEKLIESFTLLPGVGKKTAERYTFFLINQKNKNKIL-YLSKHLKELVNNIKSCNICGYIT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C C D QRD S I++V D D++ E+ + LYH+LGG + I PE++
Sbjct: 66 EKNICNFCSDSQRDHSTIMIVADNRDVYCFEKINHYHGLYHILGGLIDFSRCIKPENLNF 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHY----IMDKLKGIDVKITRLAYGIPMGSEL 183
SL +R+ K I+E+I A ++T+EG+ TA Y + LK +KIT+LAYGIP+G +
Sbjct: 126 NSLKDRL--KTIKEIIIATNSTLEGEITATYSKKFLKKYLKDEKIKITKLAYGIPIGLDF 183
Query: 184 DYLDDGTIFEAIRSRT 199
+YLD+ T+ AI +R
Sbjct: 184 NYLDEKTLCNAINNRN 199
>gi|187923818|ref|YP_001895460.1| recombination protein RecR [Burkholderia phytofirmans PsJN]
gi|229890135|sp|B2T3S5|RECR_BURPP RecName: Full=Recombination protein recR
gi|187715012|gb|ACD16236.1| recombination protein RecR [Burkholderia phytofirmans PsJN]
Length = 198
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R I+E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGVIKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|325522012|gb|EGD00696.1| recombination protein RecR [Burkholderia sp. TJI49]
Length = 198
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QTCEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|312137878|ref|YP_004005214.1| recombination protein recr [Rhodococcus equi 103S]
gi|325673355|ref|ZP_08153047.1| recombination protein R [Rhodococcus equi ATCC 33707]
gi|311887217|emb|CBH46526.1| recombination protein recR [Rhodococcus equi 103S]
gi|325555945|gb|EGD25615.1| recombination protein R [Rhodococcus equi ATCC 33707]
Length = 202
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L ++PG GP+SA+R HL+ + + L + + + V C +CG V
Sbjct: 6 VQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPEIDRLQAVLQKVRDGVQFCVVCGTVSEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 EKCRICSDPRRDRTMVCVVEEPKDVQAIERTREFKGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ RI ++ + E+I A EG+ TA Y++ L+ + ++RLA G+PMG +L+
Sbjct: 126 LLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R L
Sbjct: 186 FADELTLGRALSGRRTL 202
>gi|284006440|emb|CBA71686.1| recombination protein [Arsenophonus nasoniae]
Length = 201
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMQLAQALTRAMSEIGHCQGCRTFTEK 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C+IC + +R S I VVE AD++A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DHCSICTNPRRQQSGQICVVESPADIYAIEQTGQFVGRYFVLMGHLSPLDGIGPKDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
SL +++ + + E+I A + TIEG+ TA+YI V +R+A+GIP+G EL+ +D
Sbjct: 127 SLADKLATETVSEVILATNPTIEGEATANYIAGICAQYQVMASRIAHGIPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ +I R
Sbjct: 187 TTLSHSIIGR 196
>gi|301165422|emb|CBW24993.1| recombination protein [Bacteriovorax marinus SJ]
Length = 197
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
N+I L++IPG G ++A R TL L K L +AM N+ N + C CG D
Sbjct: 9 NVIDQLSKIPGVGDKTATRQTLILAKWSADDLNAFGDAMKNLAN-LKACVDCGMYSDLDY 67
Query: 72 CAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C IC + +R ++ + VVE+V D A+ERS LYH+LGG L+PL +GP+++ I S
Sbjct: 68 CEICSNSERKESKSVCVVENVTDCLAIERSGNYEGLYHILGGVLNPLMGVGPDELKIDSF 127
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
++R+ +++ +I A++ ++EG T YI L DV++ R+ +GIPMG L+YLD T
Sbjct: 128 VKRVRGLEVKNVILAVNPSVEGDATCSYIKQVLPS-DVEVDRIGFGIPMGGSLEYLDTMT 186
Query: 191 IFEAIRSR 198
I +A+ ++
Sbjct: 187 IAKALENK 194
>gi|296157767|ref|ZP_06840601.1| recombination protein RecR [Burkholderia sp. Ch1-1]
gi|295892013|gb|EFG71797.1| recombination protein RecR [Burkholderia sp. Ch1-1]
Length = 198
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGHSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|145294361|ref|YP_001137182.1| recombination protein RecR [Corynebacterium glutamicum R]
gi|172044393|sp|A4QAN3|RECR_CORGB RecName: Full=Recombination protein recR
gi|140844281|dbj|BAF53280.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 218
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R HL+ + L EA+ + + V C IC N+
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD I VVE+ D+ +ER+ + YHVLGG+L PL IGP ++ I +
Sbjct: 66 EVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNIST 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI +RE+I A EG+ TA Y+ LK D+
Sbjct: 126 LLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLKDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
++RLA G+P+G +L+++D+ T+ A+ R
Sbjct: 186 VVSRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|163814834|ref|ZP_02206222.1| hypothetical protein COPEUT_00984 [Coprococcus eutactus ATCC 27759]
gi|158449773|gb|EDP26768.1| hypothetical protein COPEUT_00984 [Coprococcus eutactus ATCC 27759]
Length = 199
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 113/198 (57%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ G E+ LI+ L R+PG G ++A+R H++ E L++A+ N + CS C
Sbjct: 2 EVYGGEVNRLIEELGRLPGIGTKTAQRLAFHIISMPEDRAFALSDAIVNAKKNIKYCSCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC R+ +I+VVE DL A ER+ + +YHVL G ++P IGP
Sbjct: 62 YTITDREVCPICSSPNRNHKLIMVVETPRDLAAYERTGQFDGVYHVLHGVINPALGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I L+ R++ + + ELI A + EG+ TA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKISELMRRLQSEDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R L
Sbjct: 182 ECIDEVTLLRALEGRVYL 199
>gi|160893578|ref|ZP_02074362.1| hypothetical protein CLOL250_01132 [Clostridium sp. L2-50]
gi|156864563|gb|EDO57994.1| hypothetical protein CLOL250_01132 [Clostridium sp. L2-50]
Length = 198
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I G E+ LI+ L R+PG G ++A+R H++ E+ LA+++ N K+ C+ C
Sbjct: 3 IYGGEVNRLIEELGRLPGIGAKTAQRLAFHIISMPEERAQALADSIVNAKKKIRYCNNCY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ +D C IC R+ VI+VVE DL A ER+ + +YHVL G ++P IGP D
Sbjct: 63 TITDSDLCPICRSANRNHKVIMVVETPRDLAAYERTNQYDGVYHVLHGVINPSLGIGPAD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I L++R++ + ELI A + EG+ TA YI +K +K++R+A G+P+G +L+
Sbjct: 123 IKIAELMKRLQ-GDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D+ T+ A+ R L
Sbjct: 182 CIDEVTLLRALEGRVYL 198
>gi|109899202|ref|YP_662457.1| recombination protein RecR [Pseudoalteromonas atlantica T6c]
gi|122971763|sp|Q15RT5|RECR_PSEA6 RecName: Full=Recombination protein recR
gi|109701483|gb|ABG41403.1| recombination protein RecR [Pseudoalteromonas atlantica T6c]
Length = 200
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG GP+SA+R HL+++ L++ + N V C C +
Sbjct: 7 ILELINAFKVLPGVGPKSAQRMAFHLLERNRSGALQLSQVLHNAMEHVGHCKQCRTFTES 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R +A + VVE D+ A+E++ LY VL G LSP+D IGP +IG+
Sbjct: 67 ELCEICAHPRRSEAGTLCVVESPQDVVAIEQTAEFKGLYFVLMGHLSPIDGIGPSEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ++ K + E+I A + T+EG+ TAHYI D++ TRLA+G+P+G EL+Y+D
Sbjct: 127 ELANLLDSKDLTEVILATNPTVEGEATAHYIGQMCSARDIQATRLAHGMPVGGELEYVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 NTLTHAFVGRRSL 199
>gi|331694241|ref|YP_004330480.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190]
gi|326948930|gb|AEA22627.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190]
Length = 205
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 8/200 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL+ + L E + + V C +C NV
Sbjct: 6 VQDLIDELGRLPGVGPKSAQRIAFHLLAADPADVSRLQEVLQRVKQGVRFCEVCSNVSEN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL IGP+ + I+
Sbjct: 66 ERCRFCTDARRDPTVVCVVEEPKDVLAVERTREFKGRYHVLGGALDPLGGIGPDSLKIRE 125
Query: 130 LIERI-------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGS 181
L+ R+ + +I E+I A EG+ TA Y++ L+ + ++R A G+PMG
Sbjct: 126 LLARLGGTGPASDETEIAEVIIATDPNTEGEATATYLVRLLRDFPGLTVSRPAAGLPMGG 185
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
+L++ D+ T+ A+ R L
Sbjct: 186 DLEFADELTLGRALSGRRAL 205
>gi|257091958|ref|YP_003165599.1| recombination protein RecR [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044482|gb|ACV33670.1| recombination protein RecR [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 200
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 117/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL++ LA+A+ + C C T
Sbjct: 7 LESLIEALRCLPGVGPKSAQRMAYHLMQHDRPGADRLADALQLALAALRHCQRCNTFTET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+ C+ +RD S + VVE D+ +E++ A + LY+VL G +SPLD IGP ++ ++
Sbjct: 67 EICSRCLSAKRDPSQLCVVETPVDMNMMEQTHAYSGLYYVLMGRVSPLDGIGPAELHLER 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R +RE+I A + T EG+ TAHY+ + L+ V ++R+A G+P+G EL+Y+D G
Sbjct: 127 LLARCGDGLVREVIIATNYTNEGEATAHYLSEMLRSRGVSVSRIARGVPVGGELEYVDSG 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+R R L
Sbjct: 187 TLAQALRERRPL 198
>gi|227115286|ref|ZP_03828942.1| recombination protein RecR [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 201
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + I VVE AD++A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIYAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|91783457|ref|YP_558663.1| recombination protein RecR [Burkholderia xenovorans LB400]
gi|123358829|sp|Q13Z78|RECR_BURXL RecName: Full=Recombination protein recR
gi|91687411|gb|ABE30611.1| RecR protein [Burkholderia xenovorans LB400]
Length = 198
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|15602071|ref|NP_245143.1| recombination protein RecR [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431793|sp|P57826|RECR_PASMU RecName: Full=Recombination protein recR
gi|12720430|gb|AAK02290.1| RecR [Pasteurella multocida subsp. multocida str. Pm70]
Length = 200
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C
Sbjct: 7 LEHLIESLRCLPGVGPKSAQRMAYHLLQRNRNGGMELARALTEAMSKIGHCSHCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++IG+
Sbjct: 67 EVCTICNNPRRQHSGLLCVVEQPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKEIGLH 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + E+I A + T+EG TA+YI + ++K+TR+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLQEESFHEVILATNPTVEGDATANYIAELCMQQNIKVTRIAHGIPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLTHSFLGRRQL 199
>gi|17545913|ref|NP_519315.1| recombination protein RecR [Ralstonia solanacearum GMI1000]
gi|20139463|sp|Q8Y050|RECR_RALSO RecName: Full=Recombination protein recR
gi|17428208|emb|CAD14896.1| probable recombination protein recr [Ralstonia solanacearum
GMI1000]
Length = 207
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|113868362|ref|YP_726851.1| recombinational DNA repair protein (RecF pathway) [Ralstonia
eutropha H16]
gi|113527138|emb|CAJ93483.1| Recombinational DNA repair protein (RecF pathway) [Ralstonia
eutropha H16]
Length = 318
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG GP+SA+R HL++ + L +A+ + + C C
Sbjct: 123 LQALVEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCQRCNTFTEQ 182
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP +I +
Sbjct: 183 EICETCLDDRRDASVLCVVETPADQVMIEQTLTYRGKYFVLMGRLSPLDGIGPREIHLDR 242
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R + + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 243 LLARATEPELGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVPVGGELEY 302
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 303 VDAGTIARAVMDRRNL 318
>gi|170692335|ref|ZP_02883498.1| recombination protein RecR [Burkholderia graminis C4D1M]
gi|170142765|gb|EDT10930.1| recombination protein RecR [Burkholderia graminis C4D1M]
Length = 198
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ L A+ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C+D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCLDSERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVKRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|118586635|ref|ZP_01544075.1| recombination protein [Oenococcus oeni ATCC BAA-1163]
gi|118432950|gb|EAV39676.1| recombination protein [Oenococcus oeni ATCC BAA-1163]
Length = 201
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 114/193 (59%), Gaps = 3/193 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G +SA R + + + + A +++ + + C ICG + +
Sbjct: 7 ISKLIESYSKLPGIGRKSATRLAFYTLGMSDDDVKNFARSLSASKSDLTFCRICGFITSK 66
Query: 70 D--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D PC IC D+ RD S I VVE+ D A+E + + LYHVL G LSP++ GPEDI I
Sbjct: 67 DDDPCVICSDESRDQSKIFVVENSQDEMAIENTHDYHGLYHVLNGVLSPMEGRGPEDINI 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ + +++E+I + A+ EG+ T Y+ ++ +K+TRLA G+ +G+ +DY
Sbjct: 127 TSLITRLSDHSEVKEVIIGLDASTEGEATTLYLARLIRPSGIKVTRLARGLSVGTNVDYA 186
Query: 187 DDGTIFEAIRSRT 199
D T+ +A+ RT
Sbjct: 187 DQLTLTQAVNGRT 199
>gi|260914407|ref|ZP_05920876.1| recombination protein R [Pasteurella dagmatis ATCC 43325]
gi|260631508|gb|EEX49690.1| recombination protein R [Pasteurella dagmatis ATCC 43325]
Length = 200
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQRNRNGGMDLARALTEAMSKIGHCTQCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++IG+
Sbjct: 67 EVCTICNNSRRQHSGLLCVVEQPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKEIGLH 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + E+I A + T+EG TA+YI + +VK+TR+A+GIP+G EL+ +D
Sbjct: 127 LLQQRLQEESFHEVILATNPTVEGDATANYIAEICMQHNVKVTRIAHGIPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLTHSFLGRRQL 199
>gi|254514490|ref|ZP_05126551.1| recombination protein RecR [gamma proteobacterium NOR5-3]
gi|219676733|gb|EED33098.1| recombination protein RecR [gamma proteobacterium NOR5-3]
Length = 202
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 115/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R LHL+++ + L+ ++A+ +V C C N+
Sbjct: 8 MDALIEGLRCLPGVGPKSAQRMALHLLERNREGALTLSRSLADAVERVGRCQQCRNLAEA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D RD +++ +VE D+ A+E++ Y VL G LSP+D IGPE+IG+
Sbjct: 68 VLCGICSDTGRDPTLLCIVETPGDILAIEQAGGYRGRYFVLMGHLSPIDGIGPEEIGLPI 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +++E+I A + T+EG+ TA+YI L+ + +++R+A+G+P+G EL+Y+D
Sbjct: 128 LEALARDGEVQEVILATNPTVEGEATAYYITRMLEPLIPRLSRIAHGVPLGGELEYVDGS 187
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 188 TLAHAFSGR 196
>gi|309790309|ref|ZP_07684876.1| recombination protein RecR [Oscillochloris trichoides DG6]
gi|308227643|gb|EFO81304.1| recombination protein RecR [Oscillochloris trichoides DG6]
Length = 203
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 117/200 (58%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
+ I + + LI+ L+++PG GP++A R T L++ +E + LA+A+ + +V C+
Sbjct: 4 ENAIIVEPVARLIEELSKLPGIGPKTASRLTFFLLRAEEGQVQALAQALLAVKEQVRFCT 63
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
C N+ C IC D RD S I VVE+ D+ A+ER+ A LYHVL G ++PL+ I
Sbjct: 64 RCFNITVAPLCPICQDTNRDQSKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIY 123
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
E + I LI R+ + + E++ A++ EG+ TA ++ L + V++TR A G+P G
Sbjct: 124 REHLKIDELITRVRSEPVDEVVLAMNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGG 183
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
+L++ D T+ A++ R L
Sbjct: 184 DLEWADPETLGSAMQGRREL 203
>gi|253990860|ref|YP_003042216.1| recombination protein RecR [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211639195|emb|CAR67808.1| Recombination protein recR [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782310|emb|CAQ85474.1| Recombination protein recR [Photorhabdus asymbiotica]
Length = 201
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTKAMSEIGHCQYCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EQCTICANSRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA+YI D +V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSTEVISEVILATNPTVEGEATANYIADMCAQYEVTASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|114562713|ref|YP_750226.1| recombination protein RecR [Shewanella frigidimarina NCIMB 400]
gi|122300117|sp|Q084C7|RECR_SHEFN RecName: Full=Recombination protein recR
gi|114334006|gb|ABI71388.1| recombination protein RecR [Shewanella frigidimarina NCIMB 400]
Length = 199
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L++++ ++ LA+++ ++V C C
Sbjct: 7 VDELIQSLRALPGVGPKSAQRMAFQLLERERKVGLKLADSLQKAMSEVGHCQSCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC +R + +I VVE AD+ A+E N Y VL G LSPLD +GPE++G+
Sbjct: 67 DLCPICSSHRRINTGIICVVETPADVLAIEAGGHFNGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + ++ ELI A + T+EG TAH+I D + +V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLTSNEVSELILATNPTVEGDATAHFIADMARRHNVVISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRIPL 199
>gi|238027058|ref|YP_002911289.1| recombination protein RecR [Burkholderia glumae BGR1]
gi|237876252|gb|ACR28585.1| Recombination protein RecR [Burkholderia glumae BGR1]
Length = 198
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L +++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGQSLLFATQHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|146328633|ref|YP_001209842.1| recombination protein RecR [Dichelobacter nodosus VCS1703A]
gi|166221936|sp|A5EY33|RECR_DICNV RecName: Full=Recombination protein recR
gi|146232103|gb|ABQ13081.1| recombination protein RecR [Dichelobacter nodosus VCS1703A]
Length = 201
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 112/189 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L + G G ++A+R L L+ KK LA+A+ V C C N+
Sbjct: 7 FDALVQALTCLSGVGKKTAQRMALDLLLKKNAEAATLAKALTTALATVQRCRYCRNLSDA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D R+ I VVE AD+ A+E++ L+ VL G ++PLD +GPE +G+
Sbjct: 67 EVCLLCADPLRNRQQICVVETPADVIAIEQATDYRGLFFVLMGHIAPLDGMGPEALGMDI 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ + I EL+ A +AT+EG+TTA+++ + ++ TRLAYG+P+GSEL Y+D
Sbjct: 127 LDDRLANEAISELVLATNATLEGETTAYFLAELAAKHGIQATRLAYGVPLGSELSYIDKQ 186
Query: 190 TIFEAIRSR 198
T+ A +SR
Sbjct: 187 TLHHAFQSR 195
>gi|319790367|ref|YP_004152000.1| recombination protein RecR [Thermovibrio ammonificans HB-1]
gi|317114869|gb|ADU97359.1| recombination protein RecR [Thermovibrio ammonificans HB-1]
Length = 201
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + +E LI+ LA +PG R+A RA L L + E+ + A + +V C CG
Sbjct: 2 IYPENLELLIEYLAEVPGISERAAERAVLLLSRLPEERRRQVINAFREL-EQVTPCKECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C +C D +R + I VVE D ++E+ LYHVLGG +SPL+ IGPED
Sbjct: 61 LPAAGELCRVCSDPERSRTTICVVEQPRDAISIEKLGEYKGLYHVLGGVISPLEGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++SL ERI+ ++E+I A++ T+EG+ TA +++D+L+ + VK+ R+ YGIP G +D
Sbjct: 121 LNVKSLFERIKRLGVKEVIIALNPTVEGEATAKFLVDRLQKLGVKVFRIGYGIPYGGTID 180
Query: 185 YLDDGTIFEAIRSRTVL 201
D+ T+ A + ++
Sbjct: 181 NADELTLKRAFEDKKLI 197
>gi|56707920|ref|YP_169816.1| recombination protein RecR [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670391|ref|YP_666948.1| recombination protein RecR [Francisella tularensis subsp.
tularensis FSC198]
gi|224457002|ref|ZP_03665475.1| recombination protein RecR [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370411|ref|ZP_04986416.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874729|ref|ZP_05247439.1| recombination protein recR [Francisella tularensis subsp.
tularensis MA00-2987]
gi|73621485|sp|Q5NGM6|RECR_FRATT RecName: Full=Recombination protein recR
gi|122970980|sp|Q14I28|RECR_FRAT1 RecName: Full=Recombination protein recR
gi|56604412|emb|CAG45442.1| Recombination protein recR [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320724|emb|CAL08825.1| Recombination protein recR [Francisella tularensis subsp.
tularensis FSC198]
gi|151568654|gb|EDN34308.1| hypothetical protein FTBG_00175 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840728|gb|EET19164.1| recombination protein recR [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159105|gb|ADA78496.1| Recombination protein recR [Francisella tularensis subsp.
tularensis NE061598]
Length = 200
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNART 198
>gi|50120117|ref|YP_049284.1| recombination protein RecR [Pectobacterium atrosepticum SCRI1043]
gi|73621484|sp|Q6D7Z7|RECR_ERWCT RecName: Full=Recombination protein recR
gi|49610643|emb|CAG74088.1| recombination protein [Pectobacterium atrosepticum SCRI1043]
Length = 201
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GPRSA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPRSAQRMAFQLLQRNRSGGMRLAQALTQAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + ++ VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCAICSNPRRQQNGLVCVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER++V+ E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLEERLQVESFNEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|78066595|ref|YP_369364.1| recombination protein RecR [Burkholderia sp. 383]
gi|107028996|ref|YP_626091.1| recombination protein RecR [Burkholderia cenocepacia AU 1054]
gi|116689846|ref|YP_835469.1| recombination protein RecR [Burkholderia cenocepacia HI2424]
gi|170733185|ref|YP_001765132.1| recombination protein RecR [Burkholderia cenocepacia MC0-3]
gi|206560260|ref|YP_002231024.1| recombination protein RecR [Burkholderia cenocepacia J2315]
gi|254248059|ref|ZP_04941380.1| Recombination protein RecR [Burkholderia cenocepacia PC184]
gi|123179928|sp|Q1BGY7|RECR_BURCA RecName: Full=Recombination protein recR
gi|123568319|sp|Q39FP6|RECR_BURS3 RecName: Full=Recombination protein recR
gi|171855182|sp|A0K7U9|RECR_BURCH RecName: Full=Recombination protein recR
gi|229890131|sp|B1JTA5|RECR_BURCC RecName: Full=Recombination protein recR
gi|229890132|sp|B4EAY2|RECR_BURCJ RecName: Full=Recombination protein recR
gi|77967340|gb|ABB08720.1| RecR protein [Burkholderia sp. 383]
gi|105898160|gb|ABF81118.1| recombination protein RecR [Burkholderia cenocepacia AU 1054]
gi|116647935|gb|ABK08576.1| recombination protein RecR [Burkholderia cenocepacia HI2424]
gi|124872835|gb|EAY64551.1| Recombination protein RecR [Burkholderia cenocepacia PC184]
gi|169816427|gb|ACA91010.1| recombination protein RecR [Burkholderia cenocepacia MC0-3]
gi|198036301|emb|CAR52197.1| recombination protein [Burkholderia cenocepacia J2315]
Length = 198
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R +HL++ + L ++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAVHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|300869960|ref|YP_003784831.1| recombination protein RecR [Brachyspira pilosicoli 95/1000]
gi|300687659|gb|ADK30330.1| recombination protein, RecR [Brachyspira pilosicoli 95/1000]
Length = 202
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L +++AR+PG G RSA R L+L ++ L L+ ++ +++ + LC C ++
Sbjct: 7 LDKLTQMIARLPGIGGRSAMRIALYLFDSDDEYLSELSNSILSLHKNIKLCRECYSLSEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC +RD + + +VE D+ A+E+++ N +YHVLGG + PL IG DI I+
Sbjct: 67 DICNICASDKRDRTKLCIVESYTDMIAIEKTEEYNGIYHVLGGLIEPLKGIGISDIRIKE 126
Query: 130 LIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDYL 186
LI+R+ + I E+I A A++E TTA YI L+ D KI+R+ YGI + S+++
Sbjct: 127 LIDRVKDNSSIEEIIIAFGASLEADTTASYINKTLRNNNFDKKISRITYGISLASDIENA 186
Query: 187 DDGTIFEAIRSRTVL 201
D ++ +I R V+
Sbjct: 187 DSRSLARSIADRVVM 201
>gi|188995254|ref|YP_001929506.1| recombination protein RecR [Porphyromonas gingivalis ATCC 33277]
gi|229470335|sp|B2RKL4|RECR_PORG3 RecName: Full=Recombination protein recR
gi|188594934|dbj|BAG33909.1| putative recombination protein RecR [Porphyromonas gingivalis ATCC
33277]
Length = 207
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 119/199 (59%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K + +E I A +PG G ++A R L+L+++ + A A+ ++ + C
Sbjct: 1 MIQKYPSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ + C IC D RD S + VVE++ D+ A+E + LYHVLGG +SP+D I
Sbjct: 61 RRCHNISDSGVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++I E+I A+S T+EG TT ++ KL+ V+++ +A GI +G
Sbjct: 121 GPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLESTGVRVSVIARGIAIG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSILNRT 199
>gi|225020186|ref|ZP_03709378.1| hypothetical protein CORMATOL_00188 [Corynebacterium matruchotii
ATCC 33806]
gi|305680112|ref|ZP_07402922.1| recombination protein RecR [Corynebacterium matruchotii ATCC 14266]
gi|224946930|gb|EEG28139.1| hypothetical protein CORMATOL_00188 [Corynebacterium matruchotii
ATCC 33806]
gi|305660732|gb|EFM50229.1| recombination protein RecR [Corynebacterium matruchotii ATCC 14266]
Length = 218
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 21/213 (9%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R HL+ + L A+ + V C IC N+
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHLLHVDPIDITRLQAALGAVQQGVSFCRICHNISRD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD S I VVE+ D+ LER+ N YHVLGG+L PL+ IGP+++ I +
Sbjct: 66 EVCRICADSGRDRSTICVVEEPKDIQVLERTGEFNGRYHVLGGALDPLNSIGPKELNITA 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGID-V 168
L++RI +I E+I A EG+ TA Y+ LK +
Sbjct: 126 LLQRIGGVLPDRELADSTPEQPLFDTTPEITEVILATDPNTEGEATASYLARLLKDFPGL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 186 VVSRLASGMPLGGDLEFVDELTLSRALSGRLTL 218
>gi|261867515|ref|YP_003255437.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293391392|ref|ZP_06635726.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|261412847|gb|ACX82218.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951926|gb|EFE02045.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 200
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L +PG GP+SA+R HL+++ LA+ + +K+ C C
Sbjct: 7 LENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRTFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DVCNICSNPRRQNSGLLCVVETPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + E+I A + T+EG TA+YI + +VK++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLQTESFNEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|116491392|ref|YP_810936.1| recombinational DNA repair protein (RecF pathway) [Oenococcus oeni
PSU-1]
gi|290890958|ref|ZP_06554022.1| hypothetical protein AWRIB429_1412 [Oenococcus oeni AWRIB429]
gi|122276426|sp|Q04E51|RECR_OENOB RecName: Full=Recombination protein recR
gi|116092117|gb|ABJ57271.1| Recombinational DNA repair protein (RecF pathway) [Oenococcus oeni
PSU-1]
gi|290479357|gb|EFD88017.1| hypothetical protein AWRIB429_1412 [Oenococcus oeni AWRIB429]
Length = 201
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 114/193 (59%), Gaps = 3/193 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +++PG G +SA R + + + + A +++ + + C ICG + +
Sbjct: 7 IAKLIESYSKLPGIGRKSATRLAFYTLGMSDDDVKNFARSLSASKSDLTFCRICGFITSK 66
Query: 70 D--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D PC IC D+ RD S I VVE+ D A+E + + LYHVL G LSP++ GPEDI I
Sbjct: 67 DDDPCVICSDESRDQSKIFVVENSQDEMAIENTHDYHGLYHVLNGVLSPMEGRGPEDINI 126
Query: 128 QSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SLI R+ + +++E+I + A+ EG+ T Y+ ++ +K+TRLA G+ +G+ +DY
Sbjct: 127 TSLITRLSDHSEVKEVIIGLDASTEGEATTLYLARLIRPSGIKVTRLARGLSVGTNVDYA 186
Query: 187 DDGTIFEAIRSRT 199
D T+ +A+ RT
Sbjct: 187 DQLTLTQAVNGRT 199
>gi|194290030|ref|YP_002005937.1| recombination protein recr [Cupriavidus taiwanensis LMG 19424]
gi|229890147|sp|B3R1M6|RECR_CUPTR RecName: Full=Recombination protein recR
gi|193223865|emb|CAQ69874.1| Recombination protein recR [Cupriavidus taiwanensis LMG 19424]
Length = 204
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 114/203 (56%), Gaps = 4/203 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K + ++ L++ L +PG GP+SA+R HL++ + L +A+ + + C
Sbjct: 2 KASSPTSLQALVEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCQR 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP
Sbjct: 62 CNTFTEQEICETCLDDRRDASVLCVVETPADQVMIEQTLTYRGKYFVLMGRLSPLDGIGP 121
Query: 123 EDIGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
+I + L+ R + + E+I A + T EG+ TAHYI + LK +K++RLA G+P
Sbjct: 122 REIHLDRLLARATEPELGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G EL+Y+D GTI A+ R L
Sbjct: 182 VGGELEYVDAGTIARAVMDRRNL 204
>gi|207723142|ref|YP_002253541.1| recombination protein RecR [Ralstonia solanacearum MolK2]
gi|207743466|ref|YP_002259858.1| recombination protein recr [Ralstonia solanacearum IPO1609]
gi|206588336|emb|CAQ35299.1| recombination protein recr [Ralstonia solanacearum MolK2]
gi|206594863|emb|CAQ61790.1| recombination protein recr [Ralstonia solanacearum IPO1609]
Length = 207
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|89256705|ref|YP_514067.1| recombination protein RecR [Francisella tularensis subsp.
holarctica LVS]
gi|115315113|ref|YP_763836.1| recombination protein RecR [Francisella tularensis subsp.
holarctica OSU18]
gi|156502866|ref|YP_001428931.1| recombination protein RecR [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010458|ref|ZP_02275389.1| recombination protein RecR [Francisella tularensis subsp.
holarctica FSC200]
gi|254368012|ref|ZP_04984032.1| recombination protein recR [Francisella tularensis subsp.
holarctica 257]
gi|290954137|ref|ZP_06558758.1| recombination protein RecR [Francisella tularensis subsp.
holarctica URFT1]
gi|295312455|ref|ZP_06803227.1| recombination protein RecR [Francisella tularensis subsp.
holarctica URFT1]
gi|122324885|sp|Q0BL35|RECR_FRATO RecName: Full=Recombination protein recR
gi|122500482|sp|Q2A2I5|RECR_FRATH RecName: Full=Recombination protein recR
gi|166221939|sp|A7NDC2|RECR_FRATF RecName: Full=Recombination protein recR
gi|89144536|emb|CAJ79851.1| Recombination protein recR [Francisella tularensis subsp.
holarctica LVS]
gi|115130012|gb|ABI83199.1| recombination protein RecR [Francisella tularensis subsp.
holarctica OSU18]
gi|134253822|gb|EBA52916.1| recombination protein recR [Francisella tularensis subsp.
holarctica 257]
gi|156253469|gb|ABU61975.1| recombination protein RecR [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 200
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNTRT 198
>gi|134295856|ref|YP_001119591.1| recombination protein RecR [Burkholderia vietnamiensis G4]
gi|172044365|sp|A4JEQ3|RECR_BURVG RecName: Full=Recombination protein recR
gi|134139013|gb|ABO54756.1| recombination protein RecR [Burkholderia vietnamiensis G4]
Length = 198
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSSLVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|315633852|ref|ZP_07889141.1| recombination protein R [Aggregatibacter segnis ATCC 33393]
gi|315477102|gb|EFU67845.1| recombination protein R [Aggregatibacter segnis ATCC 33393]
Length = 200
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L +PG GP+SA+R HL+++ LA+ + +K+ C C
Sbjct: 7 LENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRTFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DVCHICKNPRRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + +E+I A + T+EG TA+YI + +VK++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|84393358|ref|ZP_00992118.1| recombination protein RecR [Vibrio splendidus 12B01]
gi|86148365|ref|ZP_01066658.1| recombination protein RecR [Vibrio sp. MED222]
gi|218708916|ref|YP_002416537.1| recombination protein RecR [Vibrio splendidus LGP32]
gi|254790791|sp|B7VL98|RECR_VIBSL RecName: Full=Recombination protein recR
gi|84376074|gb|EAP92962.1| recombination protein RecR [Vibrio splendidus 12B01]
gi|85833848|gb|EAQ52013.1| recombination protein RecR [Vibrio sp. MED222]
gi|218321935|emb|CAV17930.1| Recombination protein recR [Vibrio splendidus LGP32]
Length = 199
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C+ C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R D I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEETCHICTNPKRQDNGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + +V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|319778423|ref|YP_004129336.1| Recombination protein RecR [Taylorella equigenitalis MCE9]
gi|317108447|gb|ADU91193.1| Recombination protein RecR [Taylorella equigenitalis MCE9]
Length = 198
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 111/189 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ ++ +PG G R+ARR H+++ + LA + + + CS C N ++
Sbjct: 8 LQALIESISGLPGIGVRTARRLAYHMLQNDREGAEYLAHNIKSALITLKHCSKCNNFSSS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC +RD + + +VE ADL +E S LY+VL G ++P+ G + + +
Sbjct: 68 DICDICSSNKRDLTTLCIVETPADLIRIEESHGYRGLYYVLMGRITPMSPKGAQGLNFEH 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIER++ I+E+I A + T EG+TTAH+I +D++ +R+A G+P GSEL+Y+D
Sbjct: 128 LIERVKESGIKEVIIATNFTTEGETTAHFIKTLFSDLDIQTSRIARGVPSGSELEYVDAA 187
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 188 TIAWALNDR 196
>gi|134301666|ref|YP_001121634.1| recombination protein RecR [Francisella tularensis subsp.
tularensis WY96-3418]
gi|254369564|ref|ZP_04985575.1| recombination protein recR [Francisella tularensis subsp.
holarctica FSC022]
gi|254374597|ref|ZP_04990078.1| hypothetical protein FTDG_00771 [Francisella novicida GA99-3548]
gi|166221941|sp|A4IX62|RECR_FRATW RecName: Full=Recombination protein recR
gi|134049443|gb|ABO46514.1| recombination protein RecR [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151572316|gb|EDN37970.1| hypothetical protein FTDG_00771 [Francisella novicida GA99-3548]
gi|157122518|gb|EDO66653.1| recombination protein recR [Francisella tularensis subsp.
holarctica FSC022]
Length = 200
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNART 198
>gi|332305804|ref|YP_004433655.1| recombination protein RecR [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173133|gb|AEE22387.1| recombination protein RecR [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 200
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI +PG GP+SA+R HL+++ L++ + N V C C ++ C
Sbjct: 10 LINAFKVLPGVGPKSAQRMAFHLLERNRSGALQLSQVLHNAMEHVGHCKQCRTFTESELC 69
Query: 73 AICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
IC R +A + +VE D+ A+E++ LY VL G LSP+D IGP +IG+ L
Sbjct: 70 EICAHPTRSEAGTLCIVESPQDVVAIEQTAEFKGLYFVLMGHLSPIDGIGPSEIGLDELA 129
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
++ K + E+I A + T+EG+ TAHYI D++ TRLA+G+P+G EL+Y+D T+
Sbjct: 130 NLLDNKALNEVILATNPTVEGEATAHYIGQMCSARDIQATRLAHGMPVGGELEYVDGNTL 189
Query: 192 FEAIRSRTVL 201
A R L
Sbjct: 190 THAFVGRRSL 199
>gi|62263541|gb|AAX78170.1| unknown protein [synthetic construct]
Length = 235
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 27 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 86
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 87 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 146
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 147 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 205
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 206 GELEYLDQQTLLHAFNART 224
>gi|325295256|ref|YP_004281770.1| Recombination protein recR [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065704|gb|ADY73711.1| Recombination protein recR [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 201
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 117/192 (60%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ L+ PG R+A RA L L + E + A+ + ++ C CG
Sbjct: 7 LELLIRFLSETPGISERAAERAVLSLSRLDEDEKRMITNALREL-ERIKPCVECGLPTEE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C +C D +R+ +VI VVE D ++E+ LYHVLGG +SPL+ I PED+ I+S
Sbjct: 66 DLCVVCRDPEREQTVICVVEQPRDAISIEKLGEYKGLYHVLGGVISPLEDISPEDLRIES 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +RI+ K I+ +I A++ T+EG+ T+ +++D+L+ ++V+I R++YGIP G +D D+
Sbjct: 126 LFKRIKEKNIKTVIIALNPTVEGEATSKFLIDRLEKMNVEIYRISYGIPYGGTIDMADEL 185
Query: 190 TIFEAIRSRTVL 201
T+ +A + ++
Sbjct: 186 TLKKAFEDKKLI 197
>gi|83720219|ref|YP_442742.1| recombination protein RecR [Burkholderia thailandensis E264]
gi|167581689|ref|ZP_02374563.1| recombination protein RecR [Burkholderia thailandensis TXDOH]
gi|167619806|ref|ZP_02388437.1| recombination protein RecR [Burkholderia thailandensis Bt4]
gi|257138953|ref|ZP_05587215.1| recombination protein RecR [Burkholderia thailandensis E264]
gi|123536826|sp|Q2SWF7|RECR_BURTA RecName: Full=Recombination protein recR
gi|83654044|gb|ABC38107.1| recombination protein RecR [Burkholderia thailandensis E264]
Length = 200
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 9 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 69 QVCEVCCDPERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 129 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 189 TIARAMLDRRTL 200
>gi|161524621|ref|YP_001579633.1| recombination protein RecR [Burkholderia multivorans ATCC 17616]
gi|189350623|ref|YP_001946251.1| recombination protein RecR [Burkholderia multivorans ATCC 17616]
gi|221212756|ref|ZP_03585732.1| recombination protein RecR [Burkholderia multivorans CGD1]
gi|229890133|sp|A9AGY1|RECR_BURM1 RecName: Full=Recombination protein recR
gi|160342050|gb|ABX15136.1| recombination protein RecR [Burkholderia multivorans ATCC 17616]
gi|189334645|dbj|BAG43715.1| recombination protein [Burkholderia multivorans ATCC 17616]
gi|221166969|gb|EED99439.1| recombination protein RecR [Burkholderia multivorans CGD1]
Length = 198
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHCDKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|299067245|emb|CBJ38442.1| Recombination protein recR [Ralstonia solanacearum CMR15]
Length = 206
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 7 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDA+V+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQDVCETCLDPRRDAAVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|255535694|ref|YP_003096065.1| recombination protein RecR [Flavobacteriaceae bacterium 3519-10]
gi|255341890|gb|ACU08003.1| Recombination protein RecR [Flavobacteriaceae bacterium 3519-10]
Length = 225
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K+ K +E + + +PG G +SA R LHL+K+ E L +++ + ++ C C
Sbjct: 28 KVLAKAVEEI----SGLPGIGKKSALRLALHLLKQPETQAVALGDSLKKLVTEIKYCREC 83
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N + C IC + +R +I VVEDV D+ A+E + Y VLGG +SP++ IGP
Sbjct: 84 HNFSDHEVCDICANPKRTEEIICVVEDVRDVMAIENTGKYRGKYLVLGGKISPMEGIGPN 143
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I S+ +++E +E+IFA+SAT+EG TTA+YI K K V + +A GI +G EL
Sbjct: 144 QLNISSIGKKLEKAGAKEIIFALSATMEGDTTAYYIYRKFKDSGVNFSTIARGISVGDEL 203
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ ++ +I++R
Sbjct: 204 EYADEISLGRSIQNR 218
>gi|330817180|ref|YP_004360885.1| Recombination protein RecR [Burkholderia gladioli BSR3]
gi|327369573|gb|AEA60929.1| Recombination protein RecR [Burkholderia gladioli BSR3]
Length = 198
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C +
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHCEKCNTFTES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 RICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|282899916|ref|ZP_06307877.1| RecR protein [Cylindrospermopsis raciborskii CS-505]
gi|281195186|gb|EFA70122.1| RecR protein [Cylindrospermopsis raciborskii CS-505]
Length = 171
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
L+++K+ E + LA+ + + +V LC +C ++ C IC + RD+ I VV D
Sbjct: 3 LYILKRPESEIEALAQTLIDAKKQVGLCQVCYHLTAEPVCEICRNPHRDSQTICVVADSR 62
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
D+ ALE+++ YHVLGG +SP+D IGPE + +Q+L+ R+ +K +E+I AIS ++EG
Sbjct: 63 DVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTLQALVRRVSQQKPQEVIMAISPSVEG 122
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+TT YI LK ++TR+A+G+PMG +L+Y D+ T+ +A+ R L
Sbjct: 123 ETTTLYIAGLLKPF-TRVTRIAFGLPMGGDLEYADEITLAKALEGRREL 170
>gi|90411568|ref|ZP_01219578.1| recombination protein RecR [Photobacterium profundum 3TCK]
gi|90327458|gb|EAS43811.1| recombination protein RecR [Photobacterium profundum 3TCK]
Length = 200
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R +L+++ Q LA+A++ + C C
Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFNLLQRNRQGGLQLADALSRAMTDIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CA+C + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEDDICAVCANPRRQENGQICVVESPADIVAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ + I ELI A + T+EG+ TAHYI + V TR+A+G+P+G EL+
Sbjct: 123 IGLDTLEFRLQKETIAELILATNPTVEGEATAHYIAELCHEYGVPATRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLAGRQKL 199
>gi|126439985|ref|YP_001059239.1| recombination protein RecR [Burkholderia pseudomallei 668]
gi|126452036|ref|YP_001066506.1| recombination protein RecR [Burkholderia pseudomallei 1106a]
gi|134277460|ref|ZP_01764175.1| recombination protein RecR [Burkholderia pseudomallei 305]
gi|167815437|ref|ZP_02447117.1| recombination protein RecR [Burkholderia pseudomallei 91]
gi|167823847|ref|ZP_02455318.1| recombination protein RecR [Burkholderia pseudomallei 9]
gi|167845388|ref|ZP_02470896.1| recombination protein RecR [Burkholderia pseudomallei B7210]
gi|167893931|ref|ZP_02481333.1| recombination protein RecR [Burkholderia pseudomallei 7894]
gi|167902383|ref|ZP_02489588.1| recombination protein RecR [Burkholderia pseudomallei NCTC 13177]
gi|167918648|ref|ZP_02505739.1| recombination protein RecR [Burkholderia pseudomallei BCC215]
gi|217421382|ref|ZP_03452886.1| recombination protein RecR [Burkholderia pseudomallei 576]
gi|226197313|ref|ZP_03792890.1| recombination protein RecR [Burkholderia pseudomallei Pakistan 9]
gi|237812563|ref|YP_002897014.1| recombination protein RecR [Burkholderia pseudomallei MSHR346]
gi|242316061|ref|ZP_04815077.1| recombination protein RecR [Burkholderia pseudomallei 1106b]
gi|254179536|ref|ZP_04886135.1| recombination protein RecR [Burkholderia pseudomallei 1655]
gi|254197692|ref|ZP_04904114.1| recombination protein RecR [Burkholderia pseudomallei S13]
gi|166918737|sp|A3NA68|RECR_BURP6 RecName: Full=Recombination protein recR
gi|171855121|sp|A3NVY5|RECR_BURP0 RecName: Full=Recombination protein recR
gi|172045976|sp|Q63UU6|RECR_BURPS RecName: Full=Recombination protein recR
gi|126219478|gb|ABN82984.1| recombination protein RecR [Burkholderia pseudomallei 668]
gi|126225678|gb|ABN89218.1| recombination protein RecR [Burkholderia pseudomallei 1106a]
gi|134251110|gb|EBA51189.1| recombination protein RecR [Burkholderia pseudomallei 305]
gi|169654433|gb|EDS87126.1| recombination protein RecR [Burkholderia pseudomallei S13]
gi|184210076|gb|EDU07119.1| recombination protein RecR [Burkholderia pseudomallei 1655]
gi|217395124|gb|EEC35142.1| recombination protein RecR [Burkholderia pseudomallei 576]
gi|225930692|gb|EEH26702.1| recombination protein RecR [Burkholderia pseudomallei Pakistan 9]
gi|237506041|gb|ACQ98359.1| recombination protein RecR [Burkholderia pseudomallei MSHR346]
gi|242139300|gb|EES25702.1| recombination protein RecR [Burkholderia pseudomallei 1106b]
Length = 200
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 9 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 69 QVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 129 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 189 TIARAMLDRRTL 200
>gi|167562531|ref|ZP_02355447.1| recombination protein RecR [Burkholderia oklahomensis EO147]
gi|167569717|ref|ZP_02362591.1| recombination protein RecR [Burkholderia oklahomensis C6786]
Length = 200
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 9 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 69 QICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 129 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 189 TIARAMLDRRTL 200
>gi|53719134|ref|YP_108120.1| recombination protein RecR [Burkholderia pseudomallei K96243]
gi|52209548|emb|CAH35501.1| recombination protein [Burkholderia pseudomallei K96243]
Length = 202
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 11 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 71 QVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 131 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 190
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 191 TIARAMLDRRTL 202
>gi|261822476|ref|YP_003260582.1| recombination protein RecR [Pectobacterium wasabiae WPP163]
gi|261606489|gb|ACX88975.1| recombination protein RecR [Pectobacterium wasabiae WPP163]
Length = 201
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDDIGLG 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLQVESINEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|52425561|ref|YP_088698.1| recombination protein RecR [Mannheimia succiniciproducens MBEL55E]
gi|73621497|sp|Q65SE7|RECR_MANSM RecName: Full=Recombination protein recR
gi|52307613|gb|AAU38113.1| RecR protein [Mannheimia succiniciproducens MBEL55E]
Length = 200
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C C
Sbjct: 7 LENLIESLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLARALTEAMSKIGHCEHCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C+IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DICSICDNPRRQNSRLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ ++ E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQRRLQQEQFNEVILATNPTVEGDATANYIAELCNQQNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R +
Sbjct: 187 TTLTHSFLGRRTI 199
>gi|16272391|ref|NP_438604.1| recombination protein RecR [Haemophilus influenzae Rd KW20]
gi|68249043|ref|YP_248155.1| recombination protein RecR [Haemophilus influenzae 86-028NP]
gi|145636288|ref|ZP_01791957.1| recombination protein RecR [Haemophilus influenzae PittHH]
gi|145638647|ref|ZP_01794256.1| recombination protein RecR [Haemophilus influenzae PittII]
gi|145640410|ref|ZP_01795994.1| recombination protein RecR [Haemophilus influenzae R3021]
gi|148825277|ref|YP_001290030.1| recombination protein RecR [Haemophilus influenzae PittEE]
gi|148827639|ref|YP_001292392.1| recombination protein RecR [Haemophilus influenzae PittGG]
gi|229846529|ref|ZP_04466637.1| recombination protein RecR [Haemophilus influenzae 7P49H1]
gi|260580494|ref|ZP_05848322.1| recombination protein RecR [Haemophilus influenzae RdAW]
gi|260582291|ref|ZP_05850084.1| recombination protein RecR [Haemophilus influenzae NT127]
gi|319775630|ref|YP_004138118.1| recombination protein RecR [Haemophilus influenzae F3047]
gi|319898036|ref|YP_004136233.1| recombination protein recr [Haemophilus influenzae F3031]
gi|329122321|ref|ZP_08250909.1| recombination protein R [Haemophilus aegyptius ATCC 11116]
gi|1172899|sp|P44712|RECR_HAEIN RecName: Full=Recombination protein recR
gi|73621490|sp|Q4QNA2|RECR_HAEI8 RecName: Full=Recombination protein recR
gi|166221943|sp|A5UA46|RECR_HAEIE RecName: Full=Recombination protein recR
gi|166221944|sp|A5UGV3|RECR_HAEIG RecName: Full=Recombination protein recR
gi|1573419|gb|AAC22102.1| recombination protein (recR) [Haemophilus influenzae Rd KW20]
gi|68057242|gb|AAX87495.1| recombination protein RecR [Haemophilus influenzae 86-028NP]
gi|145270453|gb|EDK10387.1| recombination protein RecR [Haemophilus influenzae PittHH]
gi|145272242|gb|EDK12150.1| recombination protein RecR [Haemophilus influenzae PittII]
gi|145274996|gb|EDK14858.1| recombination protein RecR [Haemophilus influenzae 22.4-21]
gi|148715437|gb|ABQ97647.1| recombination protein RecR [Haemophilus influenzae PittEE]
gi|148718881|gb|ABR00009.1| recombination protein RecR [Haemophilus influenzae PittGG]
gi|229810622|gb|EEP46340.1| recombination protein RecR [Haemophilus influenzae 7P49H1]
gi|260092836|gb|EEW76771.1| recombination protein RecR [Haemophilus influenzae RdAW]
gi|260094659|gb|EEW78554.1| recombination protein RecR [Haemophilus influenzae NT127]
gi|301169143|emb|CBW28740.1| gap repair protein [Haemophilus influenzae 10810]
gi|309750141|gb|ADO80125.1| Recombination protein RecR [Haemophilus influenzae R2866]
gi|309972400|gb|ADO95601.1| Recombination protein RecR [Haemophilus influenzae R2846]
gi|317433542|emb|CBY81926.1| recombination protein RecR [Haemophilus influenzae F3031]
gi|317450221|emb|CBY86437.1| recombination protein RecR [Haemophilus influenzae F3047]
gi|327473882|gb|EGF19299.1| recombination protein R [Haemophilus aegyptius ATCC 11116]
Length = 200
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRDFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|262200456|ref|YP_003271664.1| recombination protein RecR [Gordonia bronchialis DSM 43247]
gi|262083803|gb|ACY19771.1| recombination protein RecR [Gordonia bronchialis DSM 43247]
Length = 203
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI LA+ PG GP+ A+R L+ ++ + L A+ + + V C+ CGNV
Sbjct: 6 IQDLIDELAKQPGLGPKGAQRIAFALLAGEKSEIDRLVAALGRVRDDVTFCAECGNVSAN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RDA+ I VVE+ D+ A+ER+K N YHVLGG+L PL IGP+ + I+
Sbjct: 66 RLCRICSDARRDATKICVVEEPKDVHAIERTKEFNGRYHVLGGALDPLSGIGPDQLRIRE 125
Query: 130 LIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ R+ + + E+I A EG+ TA Y++ LK + +TRLA G+PMG +L+
Sbjct: 126 LLRRLANTDDGNDVTEIIVATDPNTEGEATATYLLRMLKEFPGLSVTRLASGLPMGGDLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R VL
Sbjct: 186 FADELTLGRALSGRRVL 202
>gi|145632688|ref|ZP_01788422.1| recombination protein RecR [Haemophilus influenzae 3655]
gi|229844397|ref|ZP_04464537.1| recombination protein RecR [Haemophilus influenzae 6P18H1]
gi|144986883|gb|EDJ93435.1| recombination protein RecR [Haemophilus influenzae 3655]
gi|229812646|gb|EEP48335.1| recombination protein RecR [Haemophilus influenzae 6P18H1]
Length = 200
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRDFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQQNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|253687473|ref|YP_003016663.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259563702|sp|C6DB85|RECR_PECCP RecName: Full=Recombination protein recR
gi|251754051|gb|ACT12127.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 201
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDDIGLG 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|332184290|gb|AEE26544.1| Recombination protein RecR [Francisella cf. novicida 3523]
Length = 200
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + V C
Sbjct: 1 MTSKIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANVRKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 AYCQALTEDDVCNICSNNNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I ++I E+I AIS T+EG+TTAH+I ++ D KI+R+ +G+P G
Sbjct: 121 GPSELKLDILEQIIAKREIDEVILAISPTVEGETTAHFI-SQMIAKDTKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNART 198
>gi|118497787|ref|YP_898837.1| RecFOR complex, RecR component [Francisella tularensis subsp.
novicida U112]
gi|194323759|ref|ZP_03057535.1| recombination protein RecR [Francisella tularensis subsp. novicida
FTE]
gi|208779850|ref|ZP_03247194.1| recombination protein RecR [Francisella novicida FTG]
gi|254373144|ref|ZP_04988633.1| recombination protein recR [Francisella tularensis subsp. novicida
GA99-3549]
gi|166221940|sp|A0Q768|RECR_FRATN RecName: Full=Recombination protein recR
gi|118423693|gb|ABK90083.1| RecFOR complex, RecR component [Francisella novicida U112]
gi|151570871|gb|EDN36525.1| recombination protein recR [Francisella novicida GA99-3549]
gi|194322123|gb|EDX19605.1| recombination protein RecR [Francisella tularensis subsp. novicida
FTE]
gi|208744305|gb|EDZ90605.1| recombination protein RecR [Francisella novicida FTG]
Length = 200
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETARAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD +
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L I +KI E+I AIS T+EG+TTAH+I ++ D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQRIIADRKIDEVILAISPTVEGETTAHFI-SQMIAKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNART 198
>gi|187931732|ref|YP_001891717.1| recombination protein RecR [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691568|sp|B2SGT0|RECR_FRATM RecName: Full=Recombination protein recR
gi|187712641|gb|ACD30938.1| RecFOR complex, RecR component [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 200
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLNILQQIIADRKIDEVILAISPTVEGETTAHFISQMIVK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLLHAFNART 198
>gi|186475718|ref|YP_001857188.1| recombination protein RecR [Burkholderia phymatum STM815]
gi|229890134|sp|B2JG60|RECR_BURP8 RecName: Full=Recombination protein recR
gi|184192177|gb|ACC70142.1| recombination protein RecR [Burkholderia phymatum STM815]
Length = 198
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDTERDPTLLCVVETPADQIMLEQTMTWRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVKRATDGVVKEVVLATNFTNEGEATAHYLGQTLKSRGLSVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSR 198
TI A+ R
Sbjct: 187 TIARAMLDR 195
>gi|167837617|ref|ZP_02464500.1| recombination protein RecR [Burkholderia thailandensis MSMB43]
Length = 200
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 9 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTQA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 69 PICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 129 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 189 TIARAMLDRRTL 200
>gi|323144820|ref|ZP_08079391.1| recombination protein RecR [Succinatimonas hippei YIT 12066]
gi|322415407|gb|EFY06170.1| recombination protein RecR [Succinatimonas hippei YIT 12066]
Length = 199
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LIK L +PG GPRSA R HL+ ++ + LA+ + K+ LCS C +
Sbjct: 7 LEKLIKSLQIMPGIGPRSAVRIAYHLLDRRREESVQLADTLKEAVEKIGLCSHCRDYSEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R S + VVE +DL A+E S Y VL G LSP+D +GP ++GI
Sbjct: 67 EVCPICASFKRKQSGQLCVVETPSDLLAVESSGNYFGQYFVLHGHLSPIDGVGPTELGID 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R+ +++ELI A + T+EG TA YI K ++ +++LA G+P+G +LD +D+
Sbjct: 127 ILIKRLSAGEVKELILATNPTVEGDATASYIAALAKRYNISVSKLASGVPLGGDLDNIDE 186
Query: 189 GTIFEAIRSR 198
TI ++ R
Sbjct: 187 QTIAASLAHR 196
>gi|212634564|ref|YP_002311089.1| recombination protein RecR [Shewanella piezotolerans WP3]
gi|226739008|sp|B8CN00|RECR_SHEPW RecName: Full=Recombination protein recR
gi|212556048|gb|ACJ28502.1| Recombination protein RecR [Shewanella piezotolerans WP3]
Length = 199
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA+++ ++V C C
Sbjct: 7 VDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGSKLADSLGKAMSEVGHCQSCRTFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R +SVI VVE AD+ A+E + Y VL G LSPLD +GP+++G+
Sbjct: 67 TYCPICVSTKRGHSSVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + ++ ELI A + T+EG TAHYI D K ++ ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLETHLASGEVTELILATNPTVEGDATAHYIADMAKNHELAVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLALSFNGR 196
>gi|302878406|ref|YP_003846970.1| recombination protein RecR [Gallionella capsiferriformans ES-2]
gi|302581195|gb|ADL55206.1| recombination protein RecR [Gallionella capsiferriformans ES-2]
Length = 196
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GP+SA+R HL+++ + LA ++ V CS C N
Sbjct: 6 LDELISALRCLPGVGPKSAQRMAYHLLQRDRKGALHLATSLERAAENVQHCSRCNNFSEL 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C RD S++ VVE AD +E+++ +Y+VL G LSPLD IG +++ + +
Sbjct: 66 PVCGLCASAARDESLLCVVEMPADQLMIEQTQCFRGMYYVLMGRLSPLDGIGAKELQLDN 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ E+I A + T+EG TAHY+ L+ + VK++R+A G+P+G EL+ +D G
Sbjct: 126 LVRRVQQHPC-EVILATNFTVEGDATAHYLATLLQSLGVKVSRIARGLPVGGELEQVDSG 184
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 185 TLAQAVLERREL 196
>gi|221198094|ref|ZP_03571140.1| recombination protein RecR [Burkholderia multivorans CGD2M]
gi|221204347|ref|ZP_03577364.1| recombination protein RecR [Burkholderia multivorans CGD2]
gi|221175204|gb|EEE07634.1| recombination protein RecR [Burkholderia multivorans CGD2]
gi|221182026|gb|EEE14427.1| recombination protein RecR [Burkholderia multivorans CGD2M]
Length = 198
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHCDKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|76811798|ref|YP_333766.1| recombination protein RecR [Burkholderia pseudomallei 1710b]
gi|76581251|gb|ABA50726.1| recombination protein RecR [Burkholderia pseudomallei 1710b]
Length = 202
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 11 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 71 QICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 131 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 190
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 191 TIARAMLDRRTL 202
>gi|300691827|ref|YP_003752822.1| Recombination protein recR [Ralstonia solanacearum PSI07]
gi|299078887|emb|CBJ51548.1| Recombination protein recR [Ralstonia solanacearum PSI07]
Length = 206
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 7 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K +RLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKASRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|53723571|ref|YP_103019.1| recombination protein RecR [Burkholderia mallei ATCC 23344]
gi|67639897|ref|ZP_00438726.1| recombination protein RecR [Burkholderia mallei GB8 horse 4]
gi|121601240|ref|YP_993168.1| recombination protein RecR [Burkholderia mallei SAVP1]
gi|124385650|ref|YP_001026056.1| recombination protein RecR [Burkholderia mallei NCTC 10229]
gi|126450201|ref|YP_001080675.1| recombination protein RecR [Burkholderia mallei NCTC 10247]
gi|167738247|ref|ZP_02411021.1| recombination protein RecR [Burkholderia pseudomallei 14]
gi|167910623|ref|ZP_02497714.1| recombination protein RecR [Burkholderia pseudomallei 112]
gi|254178520|ref|ZP_04885175.1| recombination protein RecR [Burkholderia mallei ATCC 10399]
gi|254189072|ref|ZP_04895583.1| recombination protein RecR [Burkholderia pseudomallei Pasteur
52237]
gi|254199966|ref|ZP_04906332.1| recombination protein RecR [Burkholderia mallei FMH]
gi|254206299|ref|ZP_04912651.1| recombination protein RecR [Burkholderia mallei JHU]
gi|254260508|ref|ZP_04951562.1| recombination protein RecR [Burkholderia pseudomallei 1710a]
gi|254297414|ref|ZP_04964867.1| recombination protein RecR [Burkholderia pseudomallei 406e]
gi|254358287|ref|ZP_04974560.1| recombination protein RecR [Burkholderia mallei 2002721280]
gi|73621474|sp|Q62JV0|RECR_BURMA RecName: Full=Recombination protein recR
gi|166221926|sp|A3MK89|RECR_BURM7 RecName: Full=Recombination protein recR
gi|166221927|sp|A2S287|RECR_BURM9 RecName: Full=Recombination protein recR
gi|166221928|sp|A1V4L5|RECR_BURMS RecName: Full=Recombination protein recR
gi|172046644|sp|Q3JRN7|RECR_BURP1 RecName: Full=Recombination protein recR
gi|52426994|gb|AAU47587.1| recombination protein RecR [Burkholderia mallei ATCC 23344]
gi|121230050|gb|ABM52568.1| recombination protein RecR [Burkholderia mallei SAVP1]
gi|124293670|gb|ABN02939.1| recombination protein RecR [Burkholderia mallei NCTC 10229]
gi|126243071|gb|ABO06164.1| recombination protein RecR [Burkholderia mallei NCTC 10247]
gi|147749562|gb|EDK56636.1| recombination protein RecR [Burkholderia mallei FMH]
gi|147753742|gb|EDK60807.1| recombination protein RecR [Burkholderia mallei JHU]
gi|148027414|gb|EDK85435.1| recombination protein RecR [Burkholderia mallei 2002721280]
gi|157807148|gb|EDO84318.1| recombination protein RecR [Burkholderia pseudomallei 406e]
gi|157936751|gb|EDO92421.1| recombination protein RecR [Burkholderia pseudomallei Pasteur
52237]
gi|160699559|gb|EDP89529.1| recombination protein RecR [Burkholderia mallei ATCC 10399]
gi|238520509|gb|EEP83968.1| recombination protein RecR [Burkholderia mallei GB8 horse 4]
gi|254219197|gb|EET08581.1| recombination protein RecR [Burkholderia pseudomallei 1710a]
Length = 200
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 9 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 69 QICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 129 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
TI A+ R L
Sbjct: 189 TIARAMLDRRTL 200
>gi|170718442|ref|YP_001783660.1| recombination protein RecR [Haemophilus somnus 2336]
gi|189029365|sp|B0UWK7|RECR_HAES2 RecName: Full=Recombination protein recR
gi|168826571|gb|ACA31942.1| recombination protein RecR [Haemophilus somnus 2336]
Length = 201
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 120/194 (61%), Gaps = 9/194 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKE----QLLGPLAEAMANIYNKVCLCSICGN 65
+ENLI+ L +PG GP+SA+R HL+++ L G L EAM+ K+ C+ C
Sbjct: 7 LENLIEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLAGALTEAMS----KIGHCTHCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R ++ + VVE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEESCAICNNPRRQNSGFLCVVEQPSDIPAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG+ TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQHESFYEVILATNPTVEGEATANYIAEMCFQHNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 TVDGTTLSHSLIGR 196
>gi|113461451|ref|YP_719520.1| recombination protein RecR [Haemophilus somnus 129PT]
gi|123132215|sp|Q0I4S5|RECR_HAES1 RecName: Full=Recombination protein recR
gi|112823494|gb|ABI25583.1| DNA replication and repair protein RecR [Haemophilus somnus 129PT]
Length = 201
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 120/194 (61%), Gaps = 9/194 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKE----QLLGPLAEAMANIYNKVCLCSICGN 65
+ENLI+ L +PG GP+SA+R HL+++ L G L EAM+ K+ C+ C
Sbjct: 7 LENLIEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLAGALTEAMS----KIGHCTHCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R ++ + VVE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEESCAICNNPRRQNSGFLCVVEQPSDIPAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG+ TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQHESFYEVILATNPTVEGEATANYIAEMCFQHNIKVSRIAHGIPIGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 TVDGTTLSHSLIGR 196
>gi|189219684|ref|YP_001940325.1| Recombinational DNA repair protein RecR [Methylacidiphilum
infernorum V4]
gi|189186542|gb|ACD83727.1| Recombinational DNA repair protein RecR [Methylacidiphilum
infernorum V4]
Length = 199
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 110/192 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NLI L +PG GPRSA R TL+L+++ + LA+++ I K+ CS CG
Sbjct: 8 IQNLIHSLKELPGIGPRSAERITLYLLEETKGTKQKLAQSINEIGAKIKPCSRCGFYTEE 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC+D RD +V D+ +ER+ A +YHVLG +SPL+ PED+ +
Sbjct: 68 TLCSICLDHSRDKQCFCLVIHPIDVIKIERTGAFRGVYHVLGKKISPLEGHVPEDLPLSP 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++RI+ +K RE+I A E + TA YI LK ++++ LA G+P GS L+Y D
Sbjct: 128 LLQRIDEEKPREIILAFGTDAEAEATALYIGQILKKRAIRVSSLAMGLPAGSGLEYADSV 187
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 188 TLSYALSGRREL 199
>gi|94311065|ref|YP_584275.1| recombination protein RecR [Cupriavidus metallidurans CH34]
gi|172046202|sp|Q1LLH0|RECR_RALME RecName: Full=Recombination protein recR
gi|93354917|gb|ABF09006.1| gap repair protein [Cupriavidus metallidurans CH34]
Length = 204
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R HL++ + L +A+ + + C+ C
Sbjct: 9 LQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCTRCNTFTEL 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RDA+++ VVE AD +E++ Y VL G LSPLD IGP++I +
Sbjct: 69 EICGTCSDPERDATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIGPKEIHLDR 128
Query: 130 LIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++ E+I A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 129 LLARATDPELGGPASEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVPVGGELEY 188
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 189 VDAGTIARAVMDRRTL 204
>gi|317047212|ref|YP_004114860.1| recombination protein RecR [Pantoea sp. At-9b]
gi|316948829|gb|ADU68304.1| recombination protein RecR [Pantoea sp. At-9b]
Length = 201
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 7 LESLMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPQDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEQETLQEVILATNPTVEGEATANYIAELCSQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|148977689|ref|ZP_01814250.1| recombination protein RecR [Vibrionales bacterium SWAT-3]
gi|145963057|gb|EDK28326.1| recombination protein RecR [Vibrionales bacterium SWAT-3]
Length = 199
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDTCHICTNPKRQENGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + +V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|73541798|ref|YP_296318.1| recombination protein RecR [Ralstonia eutropha JMP134]
gi|123624674|sp|Q46ZF9|RECR_RALEJ RecName: Full=Recombination protein recR
gi|72119211|gb|AAZ61474.1| RecR protein [Ralstonia eutropha JMP134]
Length = 204
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R HL++ + L +A+ + + C+ C
Sbjct: 9 LQALIEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCARCNTFTEQ 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C+D +RD S++ VVE AD +E++ Y VL G LSPLD IGP++I +
Sbjct: 69 EICETCLDDRRDGSILCVVETPADQIMIEQTLTYRGKYFVLMGRLSPLDGIGPKEIHLDR 128
Query: 130 LIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R + + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 129 LLARATDTEMGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVPVGGELEY 188
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 189 VDAGTIARAVMDRRNL 204
>gi|115351814|ref|YP_773653.1| recombination protein RecR [Burkholderia ambifaria AMMD]
gi|170703765|ref|ZP_02894478.1| recombination protein RecR [Burkholderia ambifaria IOP40-10]
gi|171322543|ref|ZP_02911332.1| recombination protein RecR [Burkholderia ambifaria MEX-5]
gi|172060785|ref|YP_001808437.1| recombination protein RecR [Burkholderia ambifaria MC40-6]
gi|122323080|sp|Q0BEV4|RECR_BURCM RecName: Full=Recombination protein recR
gi|229890130|sp|B1YRE7|RECR_BURA4 RecName: Full=Recombination protein recR
gi|115281802|gb|ABI87319.1| recombination protein RecR [Burkholderia ambifaria AMMD]
gi|170131326|gb|EDS99940.1| recombination protein RecR [Burkholderia ambifaria IOP40-10]
gi|171092124|gb|EDT37536.1| recombination protein RecR [Burkholderia ambifaria MEX-5]
gi|171993302|gb|ACB64221.1| recombination protein RecR [Burkholderia ambifaria MC40-6]
Length = 198
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|54308212|ref|YP_129232.1| recombination protein RecR [Photobacterium profundum SS9]
gi|73621504|sp|Q6LTE6|RECR_PHOPR RecName: Full=Recombination protein recR
gi|46912640|emb|CAG19430.1| putative recombinational DNA repair protein [Photobacterium
profundum SS9]
Length = 202
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R +L+++ Q LA+A+ + C C
Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFNLLQRNRQGGLQLADALNRAMTDIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CA+C + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEDDICAVCANPRRQENGQICVVESPADIVAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ + I ELI A + T+EG+ TAHYI + V TR+A+G+P+G EL+
Sbjct: 123 IGLDTLEFRLQKETIAELILATNPTVEGEATAHYIAELCHEYGVPATRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLAGRQKL 199
>gi|291278576|ref|YP_003495411.1| DNA recombination protein RecR [Deferribacter desulfuricans SSM1]
gi|290753278|dbj|BAI79655.1| DNA recombination protein RecR [Deferribacter desulfuricans SSM1]
Length = 199
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 113/193 (58%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ E + L+++PG G ++A R LHL+K + + L ++ + + C CG++
Sbjct: 6 DFERCVFELSKLPGIGKKTATRLALHLLKMTNKDVESLVNSINKLKTNIKFCKECGSLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C +C+D+ RD I VVE+ D+ +E S LYHVLGG ++PLD I P+ + +
Sbjct: 66 KDICYVCLDEGRDRKTICVVEEAKDVIIIENSGIYKGLYHVLGGRIAPLDGITPDMLSFE 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + E+I A + ++G+TTA+Y+ L D++ITR+A G+ +G+ ++Y D+
Sbjct: 126 KLLNRVGDLGVTEVIIATNPDVDGETTAYYLKKLLADYDIRITRIASGLAVGTHIEYSDE 185
Query: 189 GTIFEAIRSRTVL 201
I +A+ +R L
Sbjct: 186 FAILKALENRVEL 198
>gi|218960784|ref|YP_001740559.1| recombination protein RecR [Candidatus Cloacamonas acidaminovorans]
gi|167729441|emb|CAO80352.1| recombination protein RecR [Candidatus Cloacamonas acidaminovorans]
Length = 199
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 102/194 (52%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +E LI+ R PG G ++A+R +LV + + LAE + CS C
Sbjct: 2 LFSENLEKLIQSFNRFPGIGRKTAQRLAWYLVAQDKNFALNLAETIKTTVESFKTCSQCN 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ +DPC CI R S + VVE+ +D+ LE Y VLG LSPLD GPE
Sbjct: 62 MLSESDPCPFCISPDRSDSYLCVVENSSDIQILEGMNEFKGRYFVLGHLLSPLDGYGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I L+ERIE E+I A+ + EG+ T HY+ + LK + ITRL+ GIP G +L+
Sbjct: 122 INTAMLLERIENLHPSEVILALKPSAEGEATIHYLWELLKDKGISITRLSTGIPFGGDLE 181
Query: 185 YLDDGTIFEAIRSR 198
Y + T+ A + R
Sbjct: 182 YSNLNTLANAWKRR 195
>gi|157961351|ref|YP_001501385.1| recombination protein RecR [Shewanella pealeana ATCC 700345]
gi|189029375|sp|A8H2R3|RECR_SHEPA RecName: Full=Recombination protein recR
gi|157846351|gb|ABV86850.1| recombination protein RecR [Shewanella pealeana ATCC 700345]
Length = 199
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA+++A ++V C C
Sbjct: 7 VDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R S VI VVE AD+ A+E + Y VL G LSPLD +GP+++G+
Sbjct: 67 TYCPICVSTKRGHSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + + ELI A + T+EG TAHYI D K + ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEQHLATGDVSELILATNPTVEGDATAHYIADMAKRHQLTVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLALSFNGR 196
>gi|167587034|ref|ZP_02379422.1| recombination protein RecR [Burkholderia ubonensis Bu]
Length = 198
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 QICEVCSDTERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|145634560|ref|ZP_01790269.1| recombination protein RecR [Haemophilus influenzae PittAA]
gi|145268105|gb|EDK08100.1| recombination protein RecR [Haemophilus influenzae PittAA]
Length = 200
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL++ LA A+ +K+ CS C +
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQHNRSGGMNLARALTEAMSKIGHCSQCRDFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQQNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|330445439|ref|ZP_08309091.1| recombination protein RecR [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489630|dbj|GAA03588.1| recombination protein RecR [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 189
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ Q LA+A++ ++ C C D CA
Sbjct: 1 MEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLADALSQAMTEIGHCRDCRTFTEDDVCA 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + +I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ L E
Sbjct: 61 ICDNPRRQENGLICVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDRLEE 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + I ELI A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQQETISELILATNPTVEGEATAHYIAELCREYGVPASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLAGRQRL 189
>gi|229529853|ref|ZP_04419243.1| recombination protein RecR [Vibrio cholerae 12129(1)]
gi|229333627|gb|EEN99113.1| recombination protein RecR [Vibrio cholerae 12129(1)]
Length = 200
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRHKL 199
>gi|149197777|ref|ZP_01874826.1| recombination protein RecR [Lentisphaera araneosa HTCC2155]
gi|149138998|gb|EDM27402.1| recombination protein RecR [Lentisphaera araneosa HTCC2155]
Length = 200
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K+ ++ + I+ +A +PG G + A + L L E L A + ++ + + C+ C
Sbjct: 2 KLYPEQFQQAIETIASLPGIGKKGAEKLALALYSWPESKLKHFASLIDSMQHDLHNCAQC 61
Query: 64 GNVDTTDP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
G D C IC D +R I VVE V+ L +E+S + LYHVL G LSP+ IGP
Sbjct: 62 GFFSQKDALCPICSDPKRLNHQICVVEQVSQLPVIEKSGSFKGLYHVLHGKLSPMSGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+DI I SL++R + + E+I A S IEGQ TA +I L + TR+A GIP+G++
Sbjct: 122 DDINIDSLLQRCKENHVSEVILATSTDIEGQATASFIAKLLNEHGINTTRIAQGIPIGAD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D +I AI SR L
Sbjct: 182 LNYADAASIAMAINSRREL 200
>gi|323342244|ref|ZP_08082476.1| recombination protein R [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463356|gb|EFY08550.1| recombination protein R [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 196
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K++E LI+ +PG G ++A R L ++ ++ Q + ++ + N++ C +C N+
Sbjct: 4 KKLEQLIESFMMLPGVGQKTAERYALSILDQQTQDVDKFSQDLTIARNEIQSCKVCHNLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D RD S+I VV + +++E+ + +YHVLGG +S I PE++ I
Sbjct: 64 DEEICQICKDNTRDRSIICVVATAKEAFSIEKMNEYHGVYHVLGGLISTQKGILPENLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SLI R++ + + E+I A++AT+EG+ T+ Y+ KL+ ++RLA+G+P+G LDY D
Sbjct: 124 LSLINRVD-ENVTEVILALNATVEGEMTSLYLAKKLED-KTDVSRLAFGLPIGGHLDYAD 181
Query: 188 DGTIFEAIRSRT 199
D T+ +A R+
Sbjct: 182 DMTLMKAFEGRS 193
>gi|145628813|ref|ZP_01784613.1| recombination protein RecR [Haemophilus influenzae 22.1-21]
gi|144979283|gb|EDJ88969.1| recombination protein RecR [Haemophilus influenzae 22.1-21]
Length = 200
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRDFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DICNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|167755135|ref|ZP_02427262.1| hypothetical protein CLORAM_00639 [Clostridium ramosum DSM 1402]
gi|237733439|ref|ZP_04563920.1| recombination protein recR [Mollicutes bacterium D7]
gi|167705185|gb|EDS19764.1| hypothetical protein CLORAM_00639 [Clostridium ramosum DSM 1402]
gi|229383474|gb|EEO33565.1| recombination protein recR [Coprobacillus sp. D7]
Length = 197
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++L+ R+PG G +SA R H++ ++ + + A+ +I K+ C CG++
Sbjct: 7 FQDLVDCFKRLPGIGGKSAERLAYHVLSMDKKYVDEFSAAIGSIQTKIHYCKKCGHICEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD + I +VED D++A+E+ K + LYHVL G++S +D +D+ I S
Sbjct: 67 EICDICQDPDRDQTTICIVEDPKDVFAMEKVKEYHGLYHVLHGAMSIMDGKTMDDLNIAS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER++ I+E+I A + T +G+TTA Y+ L ++ +R+A G+P+GS +DY D+
Sbjct: 127 LFERLD-DSIKEVIIATNPTRDGETTALYLAKLLSKKNINTSRIANGLPIGSNIDYADEL 185
Query: 190 TIFEAIRSR 198
T+ +++ R
Sbjct: 186 TLLKSLEGR 194
>gi|167623526|ref|YP_001673820.1| recombination protein RecR [Shewanella halifaxensis HAW-EB4]
gi|189029374|sp|B0TP04|RECR_SHEHH RecName: Full=Recombination protein recR
gi|167353548|gb|ABZ76161.1| recombination protein RecR [Shewanella halifaxensis HAW-EB4]
Length = 199
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA+++A + V C C
Sbjct: 7 VDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R S +I VVE AD+ A+E + Y VL G LSPLD +GPE++G+
Sbjct: 67 TYCPICVSTKRGHSDIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + + ELI A + T+EG TAHYI D K ++ ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEQHLASGDVSELILATNPTVEGDATAHYIADMAKRHELMVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLALSFNGR 196
>gi|300857564|ref|YP_003782547.1| recombination protein [Corynebacterium pseudotuberculosis FRC41]
gi|300685018|gb|ADK27940.1| recombination protein [Corynebacterium pseudotuberculosis FRC41]
gi|302205304|gb|ADL09646.1| Recombination protein RecR [Corynebacterium pseudotuberculosis
C231]
gi|302329858|gb|ADL20052.1| Recombination protein RecR [Corynebacterium pseudotuberculosis
1002]
gi|308275544|gb|ADO25443.1| Recombination protein RecR [Corynebacterium pseudotuberculosis I19]
Length = 218
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 21/210 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R HL+ + + L +A+ + + V C IC N+
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHLLHVEPADIARLQDALGAVRDGVTFCRICCNISRE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D RD I VVE+ D+ +ER+ N YHVLGG+L PL IGP ++ I +
Sbjct: 66 SVCRICADSGRDRGTICVVEEPKDIQVIERTGEYNGRYHVLGGALDPLANIGPRELNIST 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI + E+I A EG+ TA Y+ L+ D+
Sbjct: 126 LLQRIGGVLPDRELADSTPDAPLYDSSPTVTEVILATDPNTEGEATASYLARLLRDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
++RLA G+P+G +L+++D+ T+ A+ R
Sbjct: 186 VVSRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|162448235|ref|YP_001621367.1| recombination DNA repair protein [Acholeplasma laidlawii PG-8A]
gi|161986342|gb|ABX81991.1| recombination DNA repair protein [Acholeplasma laidlawii PG-8A]
Length = 195
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L ++PG G ++A R LHL + L + + + C ICG + C
Sbjct: 9 LIDDLKKLPGIGEKTAERLALHLTNWDSEDLKHFGTHLIELKTNISFCDICGLLTDDHIC 68
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+IC D+ +D + I+VV D D++A+E++K + YHVL G + I P+D+ L
Sbjct: 69 SICKDETKDKTQIMVVSDSKDVFAIEKTKTFHGNYHVLNGLIDFSKGIEPKDLNFDKLTN 128
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R VK I+E+I A ++ +EG+ TA YI K +D+ I+RL YG+P+G++L Y D T+
Sbjct: 129 R--VKDIKEIIIATNSNVEGELTAQYIKSLYKDLDLTISRLGYGLPVGADLKYADQLTLT 186
Query: 193 EAIRSR 198
+A+ +R
Sbjct: 187 KAVENR 192
>gi|163801916|ref|ZP_02195813.1| recombination protein RecR [Vibrio sp. AND4]
gi|159174424|gb|EDP59228.1| recombination protein RecR [Vibrio sp. AND4]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R D I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQDNGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|87307571|ref|ZP_01089715.1| recombinant protein RecR [Blastopirellula marina DSM 3645]
gi|87289741|gb|EAQ81631.1| recombinant protein RecR [Blastopirellula marina DSM 3645]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 113/196 (57%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L+ A++PG G +SA R H+++ E LA+++ + V CS C N
Sbjct: 4 TTDSVTRLVDEFAKLPGIGRKSAERLAYHILRVHESEALALADSIRTVKQNVRYCSQCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ ++ C +C D +RD +++ +VE DL ALE+S LYHVL G ++PL+ IGP+ +
Sbjct: 64 LAESELCTVCQDTRRDQTLLCIVEQPRDLMALEQSGMFPGLYHVLLGRIAPLEGIGPDQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L++R+ K RE+I A + T EG TA +I + L + V +TRLA GI GS L++
Sbjct: 124 TIDALVDRVRAGKFREIIMATNPTTEGDGTALHISNLLAELPVTLTRLARGITSGSVLEF 183
Query: 186 LDDGTIFEAIRSRTVL 201
+ + +A+ R L
Sbjct: 184 TNKEILADALSGRQKL 199
>gi|317486261|ref|ZP_07945094.1| recombination protein RecR [Bilophila wadsworthia 3_1_6]
gi|316922507|gb|EFV43760.1| recombination protein RecR [Bilophila wadsworthia 3_1_6]
Length = 203
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ LAR+PG GP+SA R + L+K E L + + ++ + + LCS CG + T
Sbjct: 9 LKALVEQLARLPGLGPKSAMRVAMTLLKWPEAETRRLGKGIHDLRDNLRLCSRCGALTET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D++RD S++ VV + + LE Y +LGG L+PLD + E + +
Sbjct: 69 DPCNVCSDKERDDSLLCVVAEWDSMLTLEEGAFYKGRYLILGGLLAPLDNLSAESLELDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMD--KLKGIDVKITRLAYGIPMGSELDYLD 187
L +R+E ++RE++ A+ AT+E +TT + + V +TRLA GIP+G+E+ ++D
Sbjct: 129 LTKRLEEGQVREVVLALGATVEAETTGALVRSLVNRRFPGVTVTRLAQGIPLGAEVKFMD 188
Query: 188 DGTIFEAIRSR 198
T+ ++++ R
Sbjct: 189 RETLRQSLQYR 199
>gi|332704009|ref|ZP_08424097.1| Recombination protein recR [Desulfovibrio africanus str. Walvis
Bay]
gi|332554158|gb|EGJ51202.1| Recombination protein recR [Desulfovibrio africanus str. Walvis
Bay]
Length = 202
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 116/196 (59%), Gaps = 2/196 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + ++ + +AR+PGFGP+SA RA L L+ + L A+ + +C CS C ++
Sbjct: 7 RPLRDVAEQMARLPGFGPKSALRAALALLGMPREQAEGLGRAILTLREHLCFCSRCNSIS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC +C D RD+ +++V D L ALE Y VLGG L+PLD++ PE +
Sbjct: 67 EFDPCPVCADPGRDSEQLVLVSDWDSLLALEEGGFFRGQYFVLGGLLAPLDKVNPEQLAF 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185
L +R+ ++RELI A+ T++ + TA Y+ + ++ +V++TRLA GIP+GSE+ +
Sbjct: 127 DRLRDRLAESEVRELILALGTTMDAEATASYVKNMVERDFPEVRVTRLAQGIPLGSEVRF 186
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ +++ R L
Sbjct: 187 VDKETLRQSLLHRQKL 202
>gi|323493360|ref|ZP_08098483.1| recombination protein RecR [Vibrio brasiliensis LMG 20546]
gi|323312446|gb|EGA65587.1| recombination protein RecR [Vibrio brasiliensis LMG 20546]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K +V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDIAEVILATNPTVEGEATAHYIAELCKESNVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|260776400|ref|ZP_05885295.1| recombination protein RecR [Vibrio coralliilyticus ATCC BAA-450]
gi|260607623|gb|EEX33888.1| recombination protein RecR [Vibrio coralliilyticus ATCC BAA-450]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEETCHICTNPKRQENGQICVVESPADIAAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ + E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDVSEVILATNPTVEGEATAHYIAELCKEHQVQASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|127513161|ref|YP_001094358.1| recombination protein RecR [Shewanella loihica PV-4]
gi|166221964|sp|A3QF51|RECR_SHELP RecName: Full=Recombination protein recR
gi|126638456|gb|ABO24099.1| recombination protein RecR [Shewanella loihica PV-4]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA+A+++ + V CS C
Sbjct: 7 VDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGHKLAQALSSAMSDVGHCSSCRTFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R ++ +I VVE AD+ A+E + Y VL G LSPLD +GP+++G+
Sbjct: 67 SLCPICASSRRGNSDLICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLS 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + ++ ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLETHLASGEVSELILATNPTVEGDATAHFIADMAKQHEVNVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRIPL 199
>gi|303325569|ref|ZP_07356012.1| recombination protein RecR [Desulfovibrio sp. 3_1_syn3]
gi|302863485|gb|EFL86416.1| recombination protein RecR [Desulfovibrio sp. 3_1_syn3]
Length = 202
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ LAR+PG GP+SA RA + L+K E L + ++ + + LCS CG + +T
Sbjct: 9 LKALVEQLARLPGLGPKSAMRAAMTLLKWPEAETRRLGRGIHDLRDNLHLCSRCGGLSST 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C D R + +V + + L+ Y +LGG L+PL+R+ E + +
Sbjct: 69 DPCAVCADAGRTRETLCLVTEWDSMLTLDEGGFYRGQYMILGGLLAPLERMDSESLDLDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYI--MDKLKGIDVKITRLAYGIPMGSELDYLD 187
L R++ ++ ELI A+ AT+E + TA +I M + + ++++RLA GIP+G+E+ Y+D
Sbjct: 129 LTRRLDEGEVTELILALGATLEAENTASFIRQMVRKRFPQIRVSRLAQGIPLGAEVKYMD 188
Query: 188 DGTIFEAIRSR 198
T+ ++++ R
Sbjct: 189 KETLRQSLQYR 199
>gi|317492875|ref|ZP_07951299.1| recombination protein RecR [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918997|gb|EFV40332.1| recombination protein RecR [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 201
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 113/191 (59%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R H++++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHMLQRDRSGGMRLAQALTRAMSEIGHCEDCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DICTICSNSRRKENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPQDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + + E+I A + T+EG+ TA+YI + V TR+A+G+P+G EL+ +D
Sbjct: 127 RLEERLGQEPLTEVILATNPTVEGEATANYIAEMCSAHGVLATRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRT 199
T+ ++ R
Sbjct: 187 TTLSHSLAGRN 197
>gi|242279900|ref|YP_002992029.1| recombination protein RecR [Desulfovibrio salexigens DSM 2638]
gi|259563691|sp|C6BXI4|RECR_DESAD RecName: Full=Recombination protein recR
gi|242122794|gb|ACS80490.1| recombination protein RecR [Desulfovibrio salexigens DSM 2638]
Length = 201
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
LA++PG GP+SA R L ++K ++ + + +++ ++ K+C+C C ++ T PC IC
Sbjct: 15 LAKLPGLGPKSALRIALTMLKMPKEKVTGIGQSVIDLREKLCICEQCASITDTCPCRICS 74
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D +R+ + +V + L A+E Y VLGG LSPLD + P+ + Q L ER+E
Sbjct: 75 DPKREHDKLCLVSEWDSLLAIEEMGLYRGYYLVLGGLLSPLDGVTPQHLEFQKLEERLEK 134
Query: 137 KKIRELIFAISATIEGQTTAHYI--MDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEA 194
+++ELI A+ AT++ + TA YI M + K ++++RLA GIP+GSE+ Y D T+ ++
Sbjct: 135 GEVKELILALGATVDAEATASYIKNMVESKYPGIELSRLAQGIPIGSEVKYTDKETLRQS 194
Query: 195 IRSRTVL 201
+ R L
Sbjct: 195 LEYRQKL 201
>gi|261345762|ref|ZP_05973406.1| recombination protein RecR [Providencia rustigianii DSM 4541]
gi|282566251|gb|EFB71786.1| recombination protein RecR [Providencia rustigianii DSM 4541]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+++ +++ CS C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP DIG+
Sbjct: 67 DICNICDNPRRQQNGLICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSSETITEVILATNPTVEGEATANYIGQMCAQYGVVASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLAGRQRL 199
>gi|160945465|ref|ZP_02092691.1| hypothetical protein FAEPRAM212_02990 [Faecalibacterium prausnitzii
M21/2]
gi|158443196|gb|EDP20201.1| hypothetical protein FAEPRAM212_02990 [Faecalibacterium prausnitzii
M21/2]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 113/193 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E LI+ + G G + A R ++ ++ LA+A+ + ++ C IC N
Sbjct: 4 TAAPLEKLIEEFGKFQGVGRKGATRMAYQVLSMSDKDAAALADAIRGAHTRLHRCRICQN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C +C +RD SVI VVE D+ A ER++ N LYHVL G L PL +G E +
Sbjct: 64 FTDADLCPVCASAKRDTSVICVVEKPRDVQAFERTREYNGLYHVLHGLLDPLAGVGVEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R++ ++E+I A++ T+EG+ TA Y+ +K + +++TRLA G+P+G+ L+Y
Sbjct: 124 TVKELLARLKDDTVKEVIMAMNPTVEGEATAMYLAKLIKPLGIRVTRLASGLPVGASLEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T++ A+ R
Sbjct: 184 ADETTLYRALSGR 196
>gi|145298808|ref|YP_001141649.1| recombination protein RecR [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166221920|sp|A4SLX9|RECR_AERS4 RecName: Full=Recombination protein recR
gi|142851580|gb|ABO89901.1| recombination protein RecR [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 200
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ ++K L +PG GP+SA+R L++++ LA+ + ++ CS C
Sbjct: 7 LDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLNRALTEIGHCSHCRTFTEN 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + +R+ S ++ VVE AD+ A+E + + Y VL G LSPLD IGPE++G++
Sbjct: 67 ALCEICANPKREESGLLCVVESPADVAAIEHTGQFSGRYFVLMGHLSPLDGIGPEELGLE 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + I ELI A + TIEG TA YI D + VK++R+A+G+P+G EL+ +D
Sbjct: 127 ILEQRLKAESISELILATNPTIEGDATAWYIADMARAAGVKVSRIAHGVPVGGELELVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLMGRQPL 199
>gi|224825857|ref|ZP_03698961.1| recombination protein RecR [Lutiella nitroferrum 2002]
gi|224602081|gb|EEG08260.1| recombination protein RecR [Lutiella nitroferrum 2002]
Length = 199
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG GP+SA+R HL+++ + LA A+ + C C T
Sbjct: 7 LDQLISALKVLPGVGPKSAQRMAFHLLQRDQAGADRLARALDRALANLTHCERCNTFSET 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C + R+ + +VE ADL LE+++ + LY VL G LSP+D IGP+D+ +
Sbjct: 67 PLCNLCAEPARNQHQLCIVEMPADLLMLEQARCYDGLYFVLMGRLSPIDGIGPKDVNLDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R + E+I A + T EG+ TAH I + LK + ++R+A G+P+G EL+Y+D G
Sbjct: 127 LMVRALDGVVEEVIIATNFTAEGEVTAHMIAELLKDRGLAVSRIARGMPVGGELEYVDSG 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLAQALYERRQL 198
>gi|268608026|ref|ZP_06141756.1| recombination protein [Ruminococcus flavefaciens FD-1]
Length = 164
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 97/154 (62%)
Query: 46 LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNA 105
A+A+ + V C C N+ D C IC D +RD+SVI VVE D+ A ER++ N
Sbjct: 9 FAKALLDAKKNVHCCQCCQNLTERDICPICADDERDSSVICVVETPKDVTAFERTREYNG 68
Query: 106 LYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG 165
+YHVL G LSP+D I P+ + I+ L+ RI + E+I A + T+EG TA YI LK
Sbjct: 69 VYHVLHGLLSPMDGITPDKLRIKELLARIAKGGVSEVIMATNPTVEGDATAMYIAGLLKP 128
Query: 166 IDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
+ +K+TRLA+G+P+G L+Y D+ T+F+A+ +R
Sbjct: 129 MGIKVTRLAFGLPVGGILEYADEVTLFKALENRN 162
>gi|220905409|ref|YP_002480721.1| recombination protein RecR [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869708|gb|ACL50043.1| recombination protein RecR [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 202
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I + ++ L++ LAR+PG GP+SA RA + L+K E L + ++ + + LC
Sbjct: 1 MNKRIP-EPLKALVEQLARLPGLGPKSAMRAAMALLKWPEAETRRLGRGIHDLRDNLHLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG + +TDPC +C D +R + +V + + L+ Y +LGG L+PL+R+
Sbjct: 60 SRCGGLASTDPCPVCADAERARDTLCLVTEWDSMLTLDEGGFYRGQYMILGGLLAPLERM 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178
E + L+ R++ ++ ELI A+ AT+E + TA +I + G V+I+RLA GIP
Sbjct: 120 DAEGLDTDRLVRRLDEGEVTELILALGATLEAENTATFIRRLVAGRFPHVRISRLAQGIP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+E+ Y+D T+ ++++ R L
Sbjct: 180 LGAEVKYMDKETLRQSLQYRQDL 202
>gi|258404641|ref|YP_003197383.1| recombination protein RecR [Desulfohalobium retbaense DSM 5692]
gi|257796868|gb|ACV67805.1| recombination protein RecR [Desulfohalobium retbaense DSM 5692]
Length = 203
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 2/203 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ + ++ LA++PG GP+SA R L L+K ++ L E++ + +CLC
Sbjct: 1 MQSNKLPAPLRKVVDELAQLPGVGPKSALRMGLTLLKWPQEKAEGLGESIKQLRRTLCLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C ++ +PCAIC D RD SV+ ++ D L +E + Y VLGG LSPLD +
Sbjct: 61 EQCASLTDQNPCAICADVARDGSVLCLIPDWDSLLVMEEAGFFRGKYFVLGGLLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178
P+ + + L +R++ +IRE++ A+ T E + T ++ + L K D+++ RLA GIP
Sbjct: 121 NPDQLELDRLEKRLDQGEIREVVLALGTTTEAEATESHLKNLLHRKYPDLRVARLAQGIP 180
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+ L ++D T+ ++++ R L
Sbjct: 181 LGAHLKFMDRETLKQSMQYRQSL 203
>gi|148655671|ref|YP_001275876.1| recombination protein RecR [Roseiflexus sp. RS-1]
gi|172048083|sp|A5UTH3|RECR_ROSS1 RecName: Full=Recombination protein recR
gi|148567781|gb|ABQ89926.1| recombination protein RecR [Roseiflexus sp. RS-1]
Length = 205
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 112/186 (60%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI+ L R+PG GP++A R T L++ + L LA A+ + +V LCS C + D C
Sbjct: 17 LIEELNRLPGVGPKTASRLTFFLLRAPDDLPLALAHALTALKQQVQLCSRCYFITQGDLC 76
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
AIC + RD VI VVE+ D+ A+ER+ LYHVL G ++PL+ + EDI L++
Sbjct: 77 AICANPARDQRVICVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNREDIYFDELLD 136
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + + E+I A + +EG+ TA ++ L + V++TRLA G+P G +L++ D GT+
Sbjct: 137 RVRAEPVEEVIIATNPNLEGEATAFHLQRALAPLGVRVTRLARGLPTGGDLEWADPGTLG 196
Query: 193 EAIRSR 198
A+ R
Sbjct: 197 SALEGR 202
>gi|85058669|ref|YP_454371.1| recombination protein RecR [Sodalis glossinidius str. 'morsitans']
gi|123519908|sp|Q2NV59|RECR_SODGM RecName: Full=Recombination protein recR
gi|84779189|dbj|BAE73966.1| recombination protein RecR [Sodalis glossinidius str. 'morsitans']
Length = 201
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L + L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 7 LEALTEALRCLPGVGPKSAQRMVFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + +R S I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 PVCTICANPRRQQSGQICVVESPADIHAIEQTGQFAGSYFVLMGHLSPLDGIGPDDIGLG 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLQERLENESIEEVILATNPTVEGEATANYIAEMCAHYGVMASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|313900839|ref|ZP_07834329.1| recombination protein RecR [Clostridium sp. HGF2]
gi|312954259|gb|EFR35937.1| recombination protein RecR [Clostridium sp. HGF2]
Length = 198
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+ E L++ R+PG G ++A R ++ ++ + A N + C++CGN+
Sbjct: 4 KKFEALVECYRRLPGVGIKTAERYAFQTLEWDDETMDSWIHAFQNAKEGLKKCAVCGNLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC DQ R++ +I VV+ D+ A+E++K + +YHVL G +S I PEDI I
Sbjct: 64 EDDTCDICGDQSRNSQIICVVQSPKDVIAMEKTKEYSGVYHVLNGVISTSKGILPEDINI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ RI ++ E+I A + T+EG+TTA Y+ L+ V +TR+A+G+PMG LDY D
Sbjct: 124 DSLLNRI-SEETEEIIIATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLDYAD 182
Query: 188 DGTIFEAIRSR 198
+ T+ +AI R
Sbjct: 183 ELTLIKAIEGR 193
>gi|254252244|ref|ZP_04945562.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia
dolosa AUO158]
gi|124894853|gb|EAY68733.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia
dolosa AUO158]
Length = 198
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 LSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEA 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 PICELCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 127 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 186
Query: 190 TIFEAIRSRTVL 201
TI A+ R +
Sbjct: 187 TIARAMLDRRTM 198
>gi|167957505|ref|ZP_02544579.1| recombination protein RecR [candidate division TM7 single-cell
isolate TM7c]
Length = 205
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 121/205 (59%), Gaps = 4/205 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++ + + LI L +PG G R+A R HL++ K + L+ ++AN+ V C
Sbjct: 1 MAKQLLPRALTTLIDELGNLPGVGVRTAERYAYHLLRTKAESNKRLSNSIANLKANVKYC 60
Query: 61 SICGNVDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
+ +D + D R+ VI VVE+ D+ ALER+ N YHVLGG +SP+D
Sbjct: 61 PATFALIDSDEEISPLYADPTRNKKVIAVVEEPLDIIALERTGQYNGTYHVLGGVISPID 120
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYG 176
IGPE + I+ L+ RI+ ++ E+I A +A++EG++TA ++ +K I+VK++RLA G
Sbjct: 121 NIGPEQLHIKELVIRIKQDEVEEIIIATNASVEGESTALFLQRYIKENEINVKMSRLARG 180
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+P+G +L+Y D T+ A+ R L
Sbjct: 181 LPVGVDLEYADQITLSHALEGRRSL 205
>gi|145630380|ref|ZP_01786161.1| recombination protein RecR [Haemophilus influenzae R3021]
gi|144984115|gb|EDJ91552.1| recombination protein RecR [Haemophilus influenzae R3021]
Length = 200
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +++ CS C +
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSRIGHCSQCRDFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLVEESFHEVILATNPTVEGDATANYIAEMCHQHNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|330808466|ref|YP_004352928.1| Recombination protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376574|gb|AEA67924.1| Recombination protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 200
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C +C +
Sbjct: 7 IRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGSRLAQALSQAMEGVGHCRLCRTLTED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 DLCPQCADPRRDDSLLCVVEGPMDVYAVEQT-GFRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI RI E E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 126 LIARIEEAGTFTEVILATNPTVEGEATAHYIAQLLNNKGLIASRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|237730455|ref|ZP_04560936.1| recombination protein RecR [Citrobacter sp. 30_2]
gi|226905994|gb|EEH91912.1| recombination protein RecR [Citrobacter sp. 30_2]
Length = 201
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTKAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E ++I ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESEQINELILATNPTVEGEATANYIAELCMQYGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|149924603|ref|ZP_01912958.1| recombination protein RecR [Plesiocystis pacifica SIR-1]
gi|149814528|gb|EDM74113.1| recombination protein RecR [Plesiocystis pacifica SIR-1]
Length = 205
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
+ +LAR+PG G +SA R L +V+ + L++A+++++ + LCS+C ++ +T C
Sbjct: 1 MSSLLARLPGIGEKSALRLALAIVRSNDDYCRALSQAISDVHQHMRLCSVCCDLTSTPVC 60
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RDA +I VV D A ER+ YHVL G L PL +GP ++ + SL+
Sbjct: 61 EICSDPRRDAGLICVVSQPQDRMAFERAGVFRGRYHVLHGVLDPLAGVGPNELKVASLLA 120
Query: 133 RIEVKK---------------IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
R++ K+ +RE+I A S +EG TA Y+ L+ + V +TR+A G+
Sbjct: 121 RLQPKEGEPKEGEPKEREKSPVREVIVATSPNVEGDATALYLAKLLEPLGVSVTRIASGV 180
Query: 178 PMGSELDYLDDGTIFEAIRSR 198
+G EL+Y D T+ A+ R
Sbjct: 181 AVGGELEYADMTTLHRALEDR 201
>gi|221135202|ref|ZP_03561505.1| recombination protein RecR [Glaciecola sp. HTCC2999]
Length = 199
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +PG G +SA+R HL+++ + L+ ++ + V C C +
Sbjct: 7 ITELIESFKCLPGVGAKSAQRMAFHLLERNREGAMRLSHSLHDAMEHVTHCESCRTFTES 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC R A + +VE D+ A+E++ Y VL G LSP+D IGP +IG+
Sbjct: 67 KLCGICSSPARKQAQTLCIVESPQDILAIEQTSEFGGQYFVLMGHLSPIDGIGPAEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + I+E+I A + T+EG+ TAHYI DVK TR+A+G+P+G EL+Y+D
Sbjct: 127 ILAQRLANENIQEVILATNPTVEGEATAHYIGQMCTKHDVKATRIAHGVPVGGELEYIDG 186
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 187 NTLTHAFSGR 196
>gi|262402601|ref|ZP_06079162.1| recombination protein RecR [Vibrio sp. RC586]
gi|262351383|gb|EEZ00516.1| recombination protein RecR [Vibrio sp. RC586]
Length = 195
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRTFTEQ 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+
Sbjct: 62 DICHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D
Sbjct: 122 TLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 182 TTLSHSLLGRHKL 194
>gi|297616249|ref|YP_003701408.1| recombination protein RecR [Syntrophothermus lipocalidus DSM 12680]
gi|297144086|gb|ADI00843.1| recombination protein RecR [Syntrophothermus lipocalidus DSM 12680]
Length = 197
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 115/191 (60%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +E LI L ++PG GP+SA+R L ++K + + LA AM KV CS CGN+
Sbjct: 5 RPLEKLIDELLKLPGIGPKSAQRLALFILKMEPSEVRRLAAAMIEAREKVFPCSRCGNLT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC +C D++RD SVI VVE+ D+ ++ER+ LY+VL ++ E + +
Sbjct: 65 DQDPCWVCADEKRDESVICVVEEAGDVMSIERT-GYRGLYYVLNQEPHLMEEGALEKLKL 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++ ++ +++E+I A + T++G+ A YI +K VKITR A+G+P+G +++Y D
Sbjct: 124 AGLLDMVDKGRVKEIILATNPTVDGELVARYIAGMVKAKGVKITRPAHGLPVGGDIEYSD 183
Query: 188 DGTIFEAIRSR 198
T+ +A+ R
Sbjct: 184 ALTLRKALEGR 194
>gi|27365347|ref|NP_760875.1| recombination protein RecR [Vibrio vulnificus CMCP6]
gi|37680593|ref|NP_935202.1| recombination protein RecR [Vibrio vulnificus YJ016]
gi|320155734|ref|YP_004188113.1| recombination protein RecR [Vibrio vulnificus MO6-24/O]
gi|29611846|sp|Q8DB22|RECR_VIBVU RecName: Full=Recombination protein recR
gi|56749650|sp|Q7MIV4|RECR_VIBVY RecName: Full=Recombination protein recR
gi|27361494|gb|AAO10402.1| recombination protein RecR [Vibrio vulnificus CMCP6]
gi|37199341|dbj|BAC95173.1| Recombinational DNA repair protein [Vibrio vulnificus YJ016]
gi|319931046|gb|ADV85910.1| recombination protein RecR [Vibrio vulnificus MO6-24/O]
Length = 200
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A+++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSHAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + ++ VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDVCHICNNPKRQENGLLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDIKEVILATNPTVEGEATAHYIAELCREHKVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRHKL 199
>gi|260769013|ref|ZP_05877947.1| recombination protein RecR [Vibrio furnissii CIP 102972]
gi|260617043|gb|EEX42228.1| recombination protein RecR [Vibrio furnissii CIP 102972]
Length = 199
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMVEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICQNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R++ I E+I A + T+EG+ TAHYI + + DV +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDFRLQRGGISEVILATNPTVEGEATAHYIAELCREHDVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|197284053|ref|YP_002149925.1| recombination protein RecR [Proteus mirabilis HI4320]
gi|227358075|ref|ZP_03842417.1| recombination protein [Proteus mirabilis ATCC 29906]
gi|229470337|sp|B4EU79|RECR_PROMH RecName: Full=Recombination protein recR
gi|194681540|emb|CAR40459.1| recombination protein [Proteus mirabilis HI4320]
gi|227161810|gb|EEI46842.1| recombination protein [Proteus mirabilis ATCC 29906]
Length = 201
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCCDCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 ERCTICANARRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA+YI + D+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSQEPISEVILATNPTVEGEATANYIAEICAQYDIAASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ +I R
Sbjct: 187 TTLSHSIAGR 196
>gi|300704435|ref|YP_003746038.1| recombination protein recr [Ralstonia solanacearum CFBP2957]
gi|299072099|emb|CBJ43431.1| Recombination protein recR [Ralstonia solanacearum CFBP2957]
Length = 207
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGAARLAEALAEAAESIRHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +R ASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDVCETCLDPRRAASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|298528793|ref|ZP_07016197.1| recombination protein RecR [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512445|gb|EFI36347.1| recombination protein RecR [Desulfonatronospira thiodismutans
ASO3-1]
Length = 201
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L+ +PG GP+SA R + L+K E L +++ ++ +++C+CS C +
Sbjct: 6 RSMQLLVDRLSDLPGIGPKSALRMAMTLLKWPEDKTRGLGQSITDLRDQLCICSQCAALA 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPC+IC D R+ + +V + L +E S Y VLGG LSPLD + P+ + +
Sbjct: 66 DTDPCSICSDAMREQDKLCLVSEWDSLLVMEESGFFKGRYLVLGGLLSPLDGVRPDSLEL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185
L E ++ + E+I A+ T+E +TT YI + ++ V++TRLA GIP+GS+L +
Sbjct: 126 DKLRENLQSGQTSEIILALGTTLEAETTGSYIKNMVEKEYPHVRVTRLAQGIPLGSDLKF 185
Query: 186 LDDGTIFEAIRSR 198
+D T+ +++R R
Sbjct: 186 MDKETLKQSMRFR 198
>gi|283780298|ref|YP_003371053.1| recombination protein RecR [Pirellula staleyi DSM 6068]
gi|283438751|gb|ADB17193.1| recombination protein RecR [Pirellula staleyi DSM 6068]
Length = 199
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 110/191 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + +I+ +++PG G +SA R H+++ + LA+A+ + V CS C N+
Sbjct: 6 QSLATVIEEFSKLPGIGRKSAERLAYHILRVHKSEALALADAIRAVRESVQYCSTCYNLA 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D +RD +++ +VE DL ALE++ LYHVL G ++PLD +GP+ + I
Sbjct: 66 EGPTCTICSDDRRDKTLLCIVEQPRDLMALEQAGIFKGLYHVLLGRIAPLDGVGPDQLTI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ER+ RE+I A + T+EG TA YI + L V+ITRLA GI GS L+Y +
Sbjct: 126 DPLVERVRSGTFREIIMATNPTVEGDGTALYISNLLAEYPVQITRLARGITTGSILEYTN 185
Query: 188 DGTIFEAIRSR 198
+ +A+ R
Sbjct: 186 KEILADALSLR 196
>gi|117620825|ref|YP_857005.1| recombination protein RecR [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|166221919|sp|A0KL54|RECR_AERHH RecName: Full=Recombination protein recR
gi|117562232|gb|ABK39180.1| recombination protein RecR [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 200
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ ++K L +PG GP+SA+R L++++ LA+ ++ ++ CS C
Sbjct: 7 LDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLSRALTEIGHCSHCRTFTEN 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R+ + ++ VVE AD+ A+E++ + Y VL G LSPLD IGPE++G++
Sbjct: 67 ERCEICANPKREENGLLCVVESPADVAAIEQTGQFSGRYFVLMGHLSPLDGIGPEELGLE 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ + I ELI A + TIEG TA YI D + VK++R+A+G+P+G EL+ +D
Sbjct: 127 ILERRLKDEAISELILATNPTIEGDATAWYIADMARAAGVKVSRIAHGVPVGGELELVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLMGRQPL 199
>gi|259909220|ref|YP_002649576.1| Recombination protein [Erwinia pyrifoliae Ep1/96]
gi|224964842|emb|CAX56364.1| Recombination protein [Erwinia pyrifoliae Ep1/96]
gi|283479270|emb|CAY75186.1| Recombination protein recR [Erwinia pyrifoliae DSM 12163]
gi|310766876|gb|ADP11826.1| Recombination protein [Erwinia sp. Ejp617]
Length = 201
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + +I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DICTICANPRRQQNGLICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEKESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|295105374|emb|CBL02918.1| recombination protein RecR [Faecalibacterium prausnitzii SL3/3]
Length = 199
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 113/193 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E LI+ + G G + A R ++ ++ LA+A+ + ++ C IC N
Sbjct: 4 TAAPLEKLIEEFGKFQGVGRKGATRMAYQVLSMSDKDAAALADAIRGAHTRLHRCRICQN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C +C +RD SVI VVE D+ A ER++ N LYHVL G L PL +G E +
Sbjct: 64 FTDAELCPVCASAKRDTSVICVVEKPRDVQAFERTREYNGLYHVLHGLLDPLAGVGAEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R++ ++E+I A++ T+EG+ TA Y+ +K + +++TRLA G+P+G+ L+Y
Sbjct: 124 TVKELLARLKDDTVKEVIMAMNPTVEGEATAMYLAKLIKPLGIRVTRLASGLPVGASLEY 183
Query: 186 LDDGTIFEAIRSR 198
D+ T++ A+ R
Sbjct: 184 ADETTLYRALSGR 196
>gi|119945932|ref|YP_943612.1| recombination protein RecR [Psychromonas ingrahamii 37]
gi|171769144|sp|A1SWZ8|RECR_PSYIN RecName: Full=Recombination protein recR
gi|119864536|gb|ABM04013.1| DNA replication and repair protein RecR [Psychromonas ingrahamii
37]
Length = 199
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +P GP+SA+R HL+ K + L+ + N++ C C
Sbjct: 7 LEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ CAIC + +R+ + +I VVE D+ A+E++ + Y VL G LSPLD +GPE +G+
Sbjct: 67 NLCAICDNDKRNKNGMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGPEQLGLN 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +++ + E+I A + T+EG+ TA+YI + K +K++R+A+G+P+G EL+Y+D
Sbjct: 127 LLDKQLSSGQHSEVILATNPTVEGEATAYYIAEMAKRYAIKVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R+V
Sbjct: 187 TTLSHSFSGRSVF 199
>gi|323499525|ref|ZP_08104495.1| recombination protein RecR [Vibrio sinaloensis DSM 21326]
gi|323315398|gb|EGA68439.1| recombination protein RecR [Vibrio sinaloensis DSM 21326]
Length = 200
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKESQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|322834003|ref|YP_004214030.1| recombination protein RecR [Rahnella sp. Y9602]
gi|321169204|gb|ADW74903.1| recombination protein RecR [Rahnella sp. Y9602]
Length = 201
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + + VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EICTICANPRRKENGQVCVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLG 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G ELD +D
Sbjct: 127 RLEERLESENIQEVILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELDMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|167626338|ref|YP_001676838.1| recombination protein RecR [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189029363|sp|B0TY95|RECR_FRAP2 RecName: Full=Recombination protein recR
gi|167596339|gb|ABZ86337.1| recombination protein RecR [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 201
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 118/199 (59%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MNNQIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C ++ D C IC Q RD S + ++E + DL A+E + Y VL G +SPLD I
Sbjct: 61 KYCQSLTEKDVCDICGSQNRDESKLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I ++I E+I AIS T+EG+TTAH+I ++ G D+KI+R+ +G+P G
Sbjct: 121 GPNELKLDILEQIIINREINEIILAISPTVEGETTAHFI-SQMIGKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL+YLD T+ A +RT
Sbjct: 180 GELEYLDQQTLIHAFNART 198
>gi|163750247|ref|ZP_02157489.1| recombination protein RecR [Shewanella benthica KT99]
gi|161330103|gb|EDQ01087.1| recombination protein RecR [Shewanella benthica KT99]
Length = 199
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + L++A++ + V C C
Sbjct: 7 VDELIQTLKCLPGVGPKSAQRMAFQLLERDRKAGQSLSQALSKAMSDVGHCQSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R S VI VVE AD+ A+E + Y VL G LSPLD +GP+++G+
Sbjct: 67 VHCPICASHKRGLSQVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L E + ++ ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEEHLASGEVAELILATNPTVEGDATAHFIADIAKSHNVIVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|300721960|ref|YP_003711240.1| gap repair protein [Xenorhabdus nematophila ATCC 19061]
gi|297628457|emb|CBJ89022.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Xenorhabdus nematophila ATCC 19061]
Length = 202
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCQYCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EQCAICANPRRQQNRQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSAEILSEIILATNPTVEGEATANYIAEMCSQYGVTASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLLGR 196
>gi|269103100|ref|ZP_06155797.1| recombination protein RecR [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162998|gb|EEZ41494.1| recombination protein RecR [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 190
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ Q LAEA+ + ++ C C D CA
Sbjct: 1 MEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLAEALNHAMTEIGHCRDCRTFTEDDICA 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + ++ VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ +L
Sbjct: 61 ICDNPRRKENGIVCVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLEF 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + I ELI A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQNEAISELILATNPTVEGEATAHYIAELCQEYGVPASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLAGRQKL 189
>gi|15641069|ref|NP_230701.1| recombination protein RecR [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587092|ref|ZP_01676869.1| recombination protein RecR [Vibrio cholerae 2740-80]
gi|121726247|ref|ZP_01679537.1| recombination protein RecR [Vibrio cholerae V52]
gi|147673522|ref|YP_001216524.1| recombination protein RecR [Vibrio cholerae O395]
gi|153217695|ref|ZP_01951376.1| recombination protein RecR [Vibrio cholerae 1587]
gi|153824935|ref|ZP_01977602.1| recombination protein RecR [Vibrio cholerae MZO-2]
gi|153828163|ref|ZP_01980830.1| recombination protein RecR [Vibrio cholerae 623-39]
gi|227081229|ref|YP_002809780.1| recombination protein RecR [Vibrio cholerae M66-2]
gi|229505349|ref|ZP_04394859.1| recombination protein RecR [Vibrio cholerae BX 330286]
gi|229510981|ref|ZP_04400460.1| recombination protein RecR [Vibrio cholerae B33]
gi|229515438|ref|ZP_04404897.1| recombination protein RecR [Vibrio cholerae TMA 21]
gi|229518102|ref|ZP_04407546.1| recombination protein RecR [Vibrio cholerae RC9]
gi|229523157|ref|ZP_04412564.1| recombination protein RecR [Vibrio cholerae TM 11079-80]
gi|229525665|ref|ZP_04415070.1| recombination protein RecR [Vibrio cholerae bv. albensis VL426]
gi|229608368|ref|YP_002879016.1| recombination protein RecR [Vibrio cholerae MJ-1236]
gi|254848185|ref|ZP_05237535.1| recombination protein recR [Vibrio cholerae MO10]
gi|297578660|ref|ZP_06940588.1| recombination protein recR [Vibrio cholerae RC385]
gi|298498836|ref|ZP_07008643.1| recombination protein RecR [Vibrio cholerae MAK 757]
gi|20139783|sp|Q9KT49|RECR_VIBCH RecName: Full=Recombination protein recR
gi|172047407|sp|A5F2N5|RECR_VIBC3 RecName: Full=Recombination protein recR
gi|254790797|sp|C3LTV3|RECR_VIBCM RecName: Full=Recombination protein recR
gi|9655522|gb|AAF94215.1| recombination protein RecR [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121548727|gb|EAX58776.1| recombination protein RecR [Vibrio cholerae 2740-80]
gi|121631193|gb|EAX63566.1| recombination protein RecR [Vibrio cholerae V52]
gi|124113358|gb|EAY32178.1| recombination protein RecR [Vibrio cholerae 1587]
gi|146315405|gb|ABQ19944.1| recombination protein RecR [Vibrio cholerae O395]
gi|148876405|gb|EDL74540.1| recombination protein RecR [Vibrio cholerae 623-39]
gi|149741447|gb|EDM55477.1| recombination protein RecR [Vibrio cholerae MZO-2]
gi|227009117|gb|ACP05329.1| recombination protein RecR [Vibrio cholerae M66-2]
gi|227012872|gb|ACP09082.1| recombination protein RecR [Vibrio cholerae O395]
gi|229339246|gb|EEO04263.1| recombination protein RecR [Vibrio cholerae bv. albensis VL426]
gi|229339520|gb|EEO04535.1| recombination protein RecR [Vibrio cholerae TM 11079-80]
gi|229344817|gb|EEO09791.1| recombination protein RecR [Vibrio cholerae RC9]
gi|229347207|gb|EEO12167.1| recombination protein RecR [Vibrio cholerae TMA 21]
gi|229350946|gb|EEO15887.1| recombination protein RecR [Vibrio cholerae B33]
gi|229357572|gb|EEO22489.1| recombination protein RecR [Vibrio cholerae BX 330286]
gi|229371023|gb|ACQ61446.1| recombination protein RecR [Vibrio cholerae MJ-1236]
gi|254843890|gb|EET22304.1| recombination protein recR [Vibrio cholerae MO10]
gi|297536254|gb|EFH75087.1| recombination protein recR [Vibrio cholerae RC385]
gi|297543169|gb|EFH79219.1| recombination protein RecR [Vibrio cholerae MAK 757]
Length = 200
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDTLDYRLQRGDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRHKL 199
>gi|294635359|ref|ZP_06713853.1| recombination protein RecR [Edwardsiella tarda ATCC 23685]
gi|291091246|gb|EFE23807.1| recombination protein RecR [Edwardsiella tarda ATCC 23685]
Length = 201
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRTFTEQ 66
Query: 70 DPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + ++R+ I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EICTICANARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLGQETLNEVILATNPTVEGEATANYIAEMCAAHGVMASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|329296815|ref|ZP_08254151.1| recombination protein RecR [Plautia stali symbiont]
Length = 201
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R HL+++ LA+A+ ++ CS C
Sbjct: 7 LEALMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMCLAQALTRAMAEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 EICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPQDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLERETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|303256852|ref|ZP_07342866.1| recombination protein RecR [Burkholderiales bacterium 1_1_47]
gi|330998901|ref|ZP_08322628.1| recombination protein RecR [Parasutterella excrementihominis YIT
11859]
gi|302860343|gb|EFL83420.1| recombination protein RecR [Burkholderiales bacterium 1_1_47]
gi|329576115|gb|EGG57634.1| recombination protein RecR [Parasutterella excrementihominis YIT
11859]
Length = 203
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L ++PG GPR+A+R L+ L EA+ V C+ C N+
Sbjct: 7 IAELIDALKKLPGVGPRAAQRIAYQLLNGDRSDANRLGEALLKATKTVHRCARCNNLTDG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+ C RD S++ +VE VADL +E+S + + Y +L G LSPL+ +GP +IG+
Sbjct: 67 ELCSYCSSHNRDDSLLCIVESVADLMVIEQSLSYHGRYFILMGRLSPLNGVGPHEIGLDK 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDYLD 187
L+ER +++E+I A S T EG+ TA + + L +K+TR+A G+P G+E++Y D
Sbjct: 127 LLERAGEPEVKEVIIATSFTAEGEATAFAVSELLSKHYPQLKLTRIARGVPAGAEIEYTD 186
Query: 188 DGTIFEAIRSRTV 200
T+ +A+ +R V
Sbjct: 187 VNTVAQAMLNRRV 199
>gi|254506919|ref|ZP_05119058.1| recombination protein RecR [Vibrio parahaemolyticus 16]
gi|219550204|gb|EED27190.1| recombination protein RecR [Vibrio parahaemolyticus 16]
Length = 200
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKESQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|227874528|ref|ZP_03992694.1| recombination protein RecR [Oribacterium sinus F0268]
gi|227839624|gb|EEJ50088.1| recombination protein RecR [Oribacterium sinus F0268]
Length = 198
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 121/194 (62%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+++ L++ L+R+PG GP+SA+R L+ +++ LA+++ + + C C +
Sbjct: 6 KDMDRLVQELSRLPGIGPKSAQRLAYFLINGEKEQAYALADSIKKARDSIRYCKCCCTLT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C +C +R+ I+VVE+ D+ A ER +YHVL G++SPL IGPEDI +
Sbjct: 66 DGELCPVCSSAERNHKQIMVVENPRDMSAYERVGKYQGVYHVLHGAISPLLGIGPEDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ ++ E+I A ++++EG+TTA YI +K + V ++R+A G+P+G +++ +D
Sbjct: 126 KELMVRLQ-GEVEEVIIATNSSLEGETTASYITKLIKPLGVPLSRIASGVPVGGDIENID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R L
Sbjct: 185 EITLLRALDGRVSL 198
>gi|90407632|ref|ZP_01215812.1| recombination protein RecR [Psychromonas sp. CNPT3]
gi|90311223|gb|EAS39328.1| recombination protein RecR [Psychromonas sp. CNPT3]
Length = 199
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L +PG GP+SA+R T HL+ K L+ + +++ C C
Sbjct: 7 LDELMQALQCLPGVGPKSAQRMTYHLLDKNRSGALKLSHLLERGVHEIGHCQQCRTFTEL 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C++C +++R + I VVE D+ A+E++ + Y VL G LSPLD IGPE +G+
Sbjct: 67 NLCSLCSNEKRKVNGQICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGIGPEQLGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ++I + E+I A + T+EG+ TA+YI + K VK++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEQQISAPHVTEVILATNPTVEGEATAYYIAEIAKKFHVKVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRT 199
T+ + R+
Sbjct: 187 TTLSHSFAGRS 197
>gi|153833889|ref|ZP_01986556.1| recombination protein RecR [Vibrio harveyi HY01]
gi|269962149|ref|ZP_06176503.1| recombination protein RecR [Vibrio harveyi 1DA3]
gi|148869831|gb|EDL68805.1| recombination protein RecR [Vibrio harveyi HY01]
gi|269833233|gb|EEZ87338.1| recombination protein RecR [Vibrio harveyi 1DA3]
Length = 199
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|332992411|gb|AEF02466.1| recombination protein RecR [Alteromonas sp. SN2]
Length = 199
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG G +SA+R HL+++ + L+ + N + C C
Sbjct: 7 LNELIQALTCLPGVGNKSAQRMAFHLLERNRKGAIDLSNVLHNAMEHIHHCQRCRTFTED 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+IG+
Sbjct: 67 ELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEEIGLN 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R I E+I A + T+EG+ TAHYI +V+ +R+A+G+P+G EL+Y+D
Sbjct: 127 ELETRFSAGGINEVILATNPTVEGEATAHYIAQLCAAHNVEASRIAHGVPVGGELEYIDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 NTLTHAFSGRRKL 199
>gi|292487504|ref|YP_003530376.1| recombination protein recR [Erwinia amylovora CFBP1430]
gi|292898745|ref|YP_003538114.1| recombination protein [Erwinia amylovora ATCC 49946]
gi|291198593|emb|CBJ45701.1| recombination protein [Erwinia amylovora ATCC 49946]
gi|291552923|emb|CBA19968.1| Recombination protein recR [Erwinia amylovora CFBP1430]
gi|312171609|emb|CBX79867.1| Recombination protein recR [Erwinia amylovora ATCC BAA-2158]
Length = 201
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + ++R +I VVE AD+ A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DICTICANPRRRQNGLICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEKESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLVGR 196
>gi|315180752|gb|ADT87666.1| Recombinational DNA repair protein [Vibrio furnissii NCTC 11218]
Length = 194
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMVEIGHCSECRTFTEE 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP DIG+
Sbjct: 62 EVCHICQNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ I E+I A + T+EG+ TAHYI + + DV +R+A+G+P+G EL+ +D
Sbjct: 122 VLDFRLQRGGISEVILATNPTVEGEATAHYIAELCREHDVSASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 182 TTLSHSLLGRQKL 194
>gi|325579175|ref|ZP_08149131.1| recombination protein R [Haemophilus parainfluenzae ATCC 33392]
gi|301155602|emb|CBW15070.1| gap repair protein [Haemophilus parainfluenzae T3T1]
gi|325159410|gb|EGC71544.1| recombination protein R [Haemophilus parainfluenzae ATCC 33392]
Length = 200
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 7 LEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRDFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP++IG+
Sbjct: 67 ETCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLVEESFHEVILATNPTVEGDATANYIAEICHQHNIKVSRIAHGIPVGGELETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|319936702|ref|ZP_08011115.1| recombination protein recR [Coprobacillus sp. 29_1]
gi|319808259|gb|EFW04824.1| recombination protein recR [Coprobacillus sp. 29_1]
Length = 197
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L++ +PG G + A R H++ + + ++A+ + + + C CG++
Sbjct: 7 FEELVECFKMLPGIGTKGAERMVYHILAMDDDQIQRFSQALIDFKSNIQYCQRCGHICEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+DQQRD + I VVE D++A+E+ K LYHVL G++S +D +D+ IQ+
Sbjct: 67 ELCEICLDQQRDQTTICVVESPKDVFAMEKLKEYRGLYHVLHGTMSIMDGKTIDDLNIQT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R++ + I+E+I A + T EG+TTA ++ L ++ +R+A G+P+G LDY D+
Sbjct: 127 LFDRLD-ENIKEVIIATNPTREGETTALFLAKLLAKQNIPASRIANGLPIGGNLDYADEL 185
Query: 190 TIFEAIRSRTVL 201
T+ +++ R L
Sbjct: 186 TLLKSLEGRKKL 197
>gi|295096737|emb|CBK85827.1| DNA replication and repair protein RecR [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 201
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|116073035|ref|ZP_01470297.1| RecR protein [Synechococcus sp. RS9916]
gi|116068340|gb|EAU74092.1| RecR protein [Synechococcus sp. RS9916]
Length = 167
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADL 94
++++ E+ + AEA+ ++V C C ++ C IC + +R +I VV D DL
Sbjct: 1 MLRQPEEQIQSFAEALLAARSQVGQCQTCFHLSAEPTCEICRNPERSTGMICVVADSRDL 60
Query: 95 WALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQT 154
ALER++ + YHVLGG +SP+D IGP+ + I SL+ R+E + ++E+I A++ ++EG T
Sbjct: 61 LALERTREYSGRYHVLGGLISPMDGIGPDMLQITSLVRRVEQEGVQEVILALTPSVEGDT 120
Query: 155 TAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
T+ Y+ LK V ++R+AYG+P+GSEL+Y DD T+ A+ R
Sbjct: 121 TSLYLARLLKPFTV-VSRIAYGLPVGSELEYADDVTLTRALEGR 163
>gi|260772462|ref|ZP_05881378.1| recombination protein RecR [Vibrio metschnikovii CIP 69.14]
gi|260611601|gb|EEX36804.1| recombination protein RecR [Vibrio metschnikovii CIP 69.14]
Length = 203
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA+ +V C+ C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALNQAMVEVGHCAECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQEVCDICRNPKRQENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ I E+I A + T+EG+ TAHYI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDTLDFRLQKGGISEVILATNPTVEGEATAHYIAELCHEHQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|261341082|ref|ZP_05968940.1| recombination protein RecR [Enterobacter cancerogenus ATCC 35316]
gi|288316756|gb|EFC55694.1| recombination protein RecR [Enterobacter cancerogenus ATCC 35316]
Length = 201
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESETIKEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|251793008|ref|YP_003007734.1| recombination protein RecR [Aggregatibacter aphrophilus NJ8700]
gi|247534401|gb|ACS97647.1| recombination protein RecR [Aggregatibacter aphrophilus NJ8700]
Length = 200
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L +PG GP+SA+R HL++ LA+++ +K+ C C
Sbjct: 7 LENLIESLRVLPGVGPKSAQRMAYHLLQHNRGGGMRLAQSLTEAMSKIGHCEHCRTFTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C+IC + R ++ ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 AVCSICNNPHRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + +E+I A + T+EG TA+YI + VK++R+A+GIP+G EL+ +D
Sbjct: 127 LLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQKVKVSRIAHGIPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLTHSFLGR 196
>gi|68537105|ref|YP_251810.1| recombination protein RecR [Corynebacterium jeikeium K411]
gi|260579450|ref|ZP_05847331.1| recombination protein RecR [Corynebacterium jeikeium ATCC 43734]
gi|123650055|sp|Q4JSL5|RECR_CORJK RecName: Full=Recombination protein recR
gi|68264704|emb|CAI38192.1| recombination protein [Corynebacterium jeikeium K411]
gi|258602420|gb|EEW15716.1| recombination protein RecR [Corynebacterium jeikeium ATCC 43734]
Length = 250
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 53/245 (21%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++++I +R+PG GP+SA+R LHL+ ++ + + A+ + V C IC N+
Sbjct: 6 LQDVIDEFSRLPGIGPKSAQRIALHLLNEEPEDIERFQSALGRLQRGVTFCRICHNISQE 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C IC D RD S+I VVE+ D+ +ER+ YHVLGG+L PL+ IGP+++ +
Sbjct: 66 DVCRICADSNRDKSIICVVEESKDIQVIERTAEYRGRYHVLGGALDPLNGIGPKELNVTP 125
Query: 130 LIERI----------------------------------------------------EVK 137
L++RI E
Sbjct: 126 LVQRIGGALPDVALGAKGGGASLGDADTPADGESSGADAAETGNAKTAAVETDVEYDEAP 185
Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+I E+I A EG+ TA Y+ L+ + +TRLA GIPMG +L+++D+ T+ A
Sbjct: 186 EITEVIIATDPNTEGEATASYLGRLLRDFPGLTVTRLASGIPMGGDLEFVDELTLSRAFA 245
Query: 197 SRTVL 201
RT L
Sbjct: 246 GRTAL 250
>gi|283768645|ref|ZP_06341557.1| recombination protein RecR [Bulleidia extructa W1219]
gi|283105037|gb|EFC06409.1| recombination protein RecR [Bulleidia extructa W1219]
Length = 200
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI+++ ++PG G ++A R L + +++ A A+ N+ NKV C ICGN+
Sbjct: 7 LNHLIEMIRQLPGVGEKTAERYAFALYEMEKEEAIEFAHAIVNMKNKVKNCLICGNMSEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC +RD + I+VV+ D+ A+E + +YHVL G +S I PE++ I+
Sbjct: 67 EQCAICSSSKRDHTKILVVQSPKDIIAIENMGEYDGVYHVLNGLISATKGILPENLKIKE 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLD 187
LI+R K+ RE+I A SAT++G+TT+ Y+ L + ++ +TR+A+G+P G+ LDY D
Sbjct: 127 LIQR--AKEAREVILATSATLDGETTSLYLTKVLDQEYPNLLVTRIAHGLPSGAMLDYAD 184
Query: 188 DGTIFEAIRSR 198
+ T+ A+ R
Sbjct: 185 EMTLSHALSER 195
>gi|16759465|ref|NP_455082.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16763866|ref|NP_459481.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142763|ref|NP_806105.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414359|ref|YP_151434.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615316|ref|YP_001589281.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550987|ref|ZP_02344743.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990473|ref|ZP_02571573.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231477|ref|ZP_02656535.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237603|ref|ZP_02662661.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240317|ref|ZP_02665249.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261075|ref|ZP_02683048.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465583|ref|ZP_02699465.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168818897|ref|ZP_02830897.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444330|ref|YP_002039729.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448771|ref|YP_002044519.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194470304|ref|ZP_03076288.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735608|ref|YP_002113517.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248347|ref|YP_002145469.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263068|ref|ZP_03163142.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363279|ref|YP_002142916.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243466|ref|YP_002214439.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200391025|ref|ZP_03217636.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204930603|ref|ZP_03221533.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351794|ref|YP_002225595.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855965|ref|YP_002242616.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213022745|ref|ZP_03337192.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213163419|ref|ZP_03349129.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427145|ref|ZP_03359895.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213579999|ref|ZP_03361825.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213615956|ref|ZP_03371782.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213650776|ref|ZP_03380829.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865426|ref|ZP_03387545.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582323|ref|YP_002636121.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911384|ref|ZP_04655221.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289811209|ref|ZP_06541838.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289828677|ref|ZP_06546476.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|54039040|sp|P65993|RECR_SALTI RecName: Full=Recombination protein recR
gi|54041799|sp|P65992|RECR_SALTY RecName: Full=Recombination protein recR
gi|73621514|sp|Q5PFK6|RECR_SALPA RecName: Full=Recombination protein recR
gi|189029372|sp|A9MW89|RECR_SALPB RecName: Full=Recombination protein recR
gi|226726307|sp|B5EXM8|RECR_SALA4 RecName: Full=Recombination protein recR
gi|226726308|sp|B5FLJ4|RECR_SALDC RecName: Full=Recombination protein recR
gi|226726309|sp|B5QU75|RECR_SALEP RecName: Full=Recombination protein recR
gi|226726310|sp|B5R610|RECR_SALG2 RecName: Full=Recombination protein recR
gi|229485576|sp|B4T9H9|RECR_SALHS RecName: Full=Recombination protein recR
gi|229485577|sp|B4SWX9|RECR_SALNS RecName: Full=Recombination protein recR
gi|229485578|sp|B5BD46|RECR_SALPK RecName: Full=Recombination protein recR
gi|229485579|sp|B4TMG4|RECR_SALSV RecName: Full=Recombination protein recR
gi|254790781|sp|C0Q810|RECR_SALPC RecName: Full=Recombination protein recR
gi|25300540|pir||AI0562 recombination protein RecR [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16418994|gb|AAL19440.1| putative recombination protein, gap repair [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16501757|emb|CAD04971.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138395|gb|AAO69965.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128616|gb|AAV78122.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364680|gb|ABX68448.1| hypothetical protein SPAB_03086 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402993|gb|ACF63215.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194407075|gb|ACF67294.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456668|gb|EDX45507.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711110|gb|ACF90331.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631916|gb|EDX50436.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094756|emb|CAR60289.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212050|gb|ACH49447.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241323|gb|EDY23943.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289528|gb|EDY28891.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937982|gb|ACH75315.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199603470|gb|EDZ02016.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320537|gb|EDZ05740.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271575|emb|CAR36395.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324246|gb|EDZ12085.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330831|gb|EDZ17595.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205334145|gb|EDZ20909.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339737|gb|EDZ26501.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344002|gb|EDZ30766.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350079|gb|EDZ36710.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707768|emb|CAR32053.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466850|gb|ACN44680.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245768|emb|CBG23565.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992203|gb|ACY87088.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157095|emb|CBW16579.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911518|dbj|BAJ35492.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084761|emb|CBY94551.1| Recombination protein recR [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226064|gb|EFX51115.1| Recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614762|gb|EFY11691.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618869|gb|EFY15757.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623576|gb|EFY20415.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629125|gb|EFY25904.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631846|gb|EFY28600.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637417|gb|EFY34119.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642102|gb|EFY38712.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645874|gb|EFY42395.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322652336|gb|EFY48691.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653239|gb|EFY49572.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660612|gb|EFY56848.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664764|gb|EFY60957.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669183|gb|EFY65333.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670728|gb|EFY66861.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679033|gb|EFY75088.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682062|gb|EFY78087.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685109|gb|EFY81106.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323128805|gb|ADX16235.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192997|gb|EFZ78220.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196921|gb|EFZ82063.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203906|gb|EFZ88923.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207009|gb|EFZ91962.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323214212|gb|EFZ98970.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214464|gb|EFZ99215.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219193|gb|EGA03690.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226970|gb|EGA11151.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230212|gb|EGA14332.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233950|gb|EGA18039.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238356|gb|EGA22414.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244043|gb|EGA28052.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246631|gb|EGA30605.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251830|gb|EGA35693.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257826|gb|EGA41505.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261160|gb|EGA44752.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264910|gb|EGA48409.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272473|gb|EGA55880.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622186|gb|EGE28531.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626830|gb|EGE33173.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987435|gb|AEF06418.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 201
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|188534597|ref|YP_001908394.1| Recombination protein [Erwinia tasmaniensis Et1/99]
gi|229890149|sp|B2VCL6|RECR_ERWT9 RecName: Full=Recombination protein recR
gi|188029639|emb|CAO97518.1| Recombination protein [Erwinia tasmaniensis Et1/99]
Length = 201
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + +I VVE AD+ A+E++ + Y VL G LSPLD IGP DIG+
Sbjct: 67 EICTICANPRRQHNGLICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLETESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|33151560|ref|NP_872913.1| recombination protein RecR [Haemophilus ducreyi 35000HP]
gi|33147780|gb|AAP95302.1| recombination DNA repair protein [Haemophilus ducreyi 35000HP]
Length = 201
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENLI L +PG GP+SA+R HL+++ LA+A+ + C+ C
Sbjct: 3 TSPLLENLIDALRALPGIGPKSAQRMAYHLLQRNRNGGLNLAKALNEAMTHIGHCNACRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R S + +VE D+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEEECTICKNPRRQISGQLCIVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + E+I A + TIEG TA+YI + +VK+TR+A+GIP+G L+
Sbjct: 123 IGLDLLQQRLEQESFHEIILATNPTIEGDATANYIAEICHLYNVKVTRIAHGIPVGGSLE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ + R
Sbjct: 183 MVDGTTLSHSFAGR 196
>gi|212711279|ref|ZP_03319407.1| hypothetical protein PROVALCAL_02351 [Providencia alcalifaciens DSM
30120]
gi|212686008|gb|EEB45536.1| hypothetical protein PROVALCAL_02351 [Providencia alcalifaciens DSM
30120]
Length = 199
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP DIG+
Sbjct: 67 EICNICDNPRRQQNGLICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA YI V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLASETITEVILATNPTVEGEATASYIGQMCAQYGVTASRIAHGVPVGGELEMVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R+ L
Sbjct: 187 TTLSHSLSGRSKL 199
>gi|300715627|ref|YP_003740430.1| Recombination protein RecR [Erwinia billingiae Eb661]
gi|299061463|emb|CAX58577.1| Recombination protein RecR [Erwinia billingiae Eb661]
Length = 201
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 7 LESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + +I +VE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EICTICANPRRQQNGLICIVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPNDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEKESIQEVILATNPTVEGEATANYIAEMCGQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|291460810|ref|ZP_06600200.1| recombination protein RecR [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416583|gb|EFE90302.1| recombination protein RecR [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 198
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I L+ L+R+PG G +SA+R +++ + L+E++ + + C C +
Sbjct: 6 KDIARLVTELSRLPGVGVKSAQRLAFYIINSPLEQAEALSESILSAKKNIRYCRECFTIT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
++ C +C ++R+ I+VVE+ D+ A ER+ +YHVL G++SP+ IGPEDI +
Sbjct: 66 DSELCPVCASEERNHRQIMVVENPRDMGAYERTGRYRGVYHVLHGAISPMLGIGPEDIRL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L++R++ K + E+I A ++++EG+TTA Y+ +K ++++R+A G+P+G +++ +D
Sbjct: 126 KELMQRLQ-KPVDEVIIATNSSLEGETTATYLTKLIKPSGIRLSRIASGVPVGGDIENID 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R +L
Sbjct: 185 EVTLLRALDGRVIL 198
>gi|322515728|ref|ZP_08068693.1| recombination protein R [Actinobacillus ureae ATCC 25976]
gi|322118190|gb|EFX90499.1| recombination protein R [Actinobacillus ureae ATCC 25976]
Length = 201
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C+ C
Sbjct: 7 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALNEAMTHIGHCNSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ +D
Sbjct: 127 LLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLSHSFAGR 196
>gi|156975354|ref|YP_001446261.1| recombination protein RecR [Vibrio harveyi ATCC BAA-1116]
gi|171769809|sp|A7MUE4|RECR_VIBHB RecName: Full=Recombination protein recR
gi|156526948|gb|ABU72034.1| hypothetical protein VIBHAR_03085 [Vibrio harveyi ATCC BAA-1116]
Length = 194
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 2 LEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRTFTEE 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+
Sbjct: 62 EVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+ +D
Sbjct: 122 VLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 182 TTLSHSLLGR 191
>gi|315126894|ref|YP_004068897.1| recombination protein recR [Pseudoalteromonas sp. SM9913]
gi|315015408|gb|ADT68746.1| recombination protein recR [Pseudoalteromonas sp. SM9913]
Length = 202
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +LI+ L PG GP+SA+R HL+++ + L A+ V C C
Sbjct: 7 LTSLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAVGHCQSCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R D+ ++ VVE D+ A+E++ LY VL G LSP+D IGP++IG+
Sbjct: 67 AQCDICLSTKRQDSGILCVVESPTDVLAIEQTGQYKGLYFVLMGHLSPIDGIGPKEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +++ I E+I A + ++EG+TTAHYI +V +R+A+GIP+G ELD +D
Sbjct: 127 VLEQKLAQGGINEVILATNPSVEGETTAHYIAQLCHKNNVGASRIAHGIPVGGELDLVDG 186
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 187 MTLMHAFSGR 196
>gi|255745473|ref|ZP_05419421.1| recombination protein RecR [Vibrio cholera CIRS 101]
gi|255736548|gb|EET91945.1| recombination protein RecR [Vibrio cholera CIRS 101]
Length = 195
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQ 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+
Sbjct: 62 DVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L R++ I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D
Sbjct: 122 TLDYRLQRGDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 182 TTLSHSLLGRHKL 194
>gi|296101607|ref|YP_003611753.1| recombination protein RecR [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056066|gb|ADF60804.1| recombination protein RecR [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 201
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|168700666|ref|ZP_02732943.1| recombinant protein RecR [Gemmata obscuriglobus UQM 2246]
Length = 201
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 107/189 (56%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L++ L ++PG GP+SA R L+ + LA+A+ + ++V C C N+
Sbjct: 10 IAGLLEELTKLPGVGPKSAERIAHFLLAGDRRHAVELADALRAVADRVRPCKECFNLTDG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD ++ VVE D+ + ER+ LYHVLGG L+PLD +GP+ + +
Sbjct: 70 ELCPICSDPKRDGGLLCVVETPRDVNSFERAGNFRGLYHVLGGRLAPLDGMGPDRLTFTA 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ +RE+I A S T+EG TA L V++TRLA G+P GS L+ +
Sbjct: 130 LVERVRRGGVREVILATSPTLEGDGTALLASTVLAQTGVQVTRLARGLPSGSSLELANAQ 189
Query: 190 TIFEAIRSR 198
+ EA+ R
Sbjct: 190 MLAEALDGR 198
>gi|294141552|ref|YP_003557530.1| recombination protein RecR [Shewanella violacea DSS12]
gi|293328021|dbj|BAJ02752.1| recombination protein RecR [Shewanella violacea DSS12]
Length = 199
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + L +A+ + V C C
Sbjct: 7 VDELIQALKCLPGVGPKSAQRMAFQLLERDRKAGQSLGQALEKAMSDVGHCQSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R S +I VVE AD+ A+E + Y VL G LSPLD +GP+++G+
Sbjct: 67 VHCPICASHKRGQSQLICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L E + ++ ELI A + T+EG TAH+I D K DV ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEEHLASGEVSELILATNPTVEGDATAHFIADMAKIHDVIVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|261252408|ref|ZP_05944981.1| recombination protein RecR [Vibrio orientalis CIP 102891]
gi|260935799|gb|EEX91788.1| recombination protein RecR [Vibrio orientalis CIP 102891]
Length = 200
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQMCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCREHQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|15800201|ref|NP_286213.1| recombination protein RecR [Escherichia coli O157:H7 EDL933]
gi|15829779|ref|NP_308552.1| recombination protein RecR [Escherichia coli O157:H7 str. Sakai]
gi|16128456|ref|NP_415005.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655]
gi|24111855|ref|NP_706365.1| recombination protein RecR [Shigella flexneri 2a str. 301]
gi|30061972|ref|NP_836143.1| recombination protein RecR [Shigella flexneri 2a str. 2457T]
gi|74311051|ref|YP_309470.1| recombination protein RecR [Shigella sonnei Ss046]
gi|89107341|ref|AP_001121.1| gap repair protein [Escherichia coli str. K-12 substr. W3110]
gi|91209546|ref|YP_539532.1| recombination protein RecR [Escherichia coli UTI89]
gi|110804499|ref|YP_688019.1| recombination protein RecR [Shigella flexneri 5 str. 8401]
gi|117622729|ref|YP_851642.1| recombination protein RecR [Escherichia coli APEC O1]
gi|157157829|ref|YP_001461661.1| recombination protein RecR [Escherichia coli E24377A]
gi|157159999|ref|YP_001457317.1| recombination protein RecR [Escherichia coli HS]
gi|168747850|ref|ZP_02772872.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4113]
gi|168754579|ref|ZP_02779586.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4401]
gi|168760371|ref|ZP_02785378.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4501]
gi|168768429|ref|ZP_02793436.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4486]
gi|168777170|ref|ZP_02802177.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4196]
gi|168778967|ref|ZP_02803974.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4076]
gi|168786325|ref|ZP_02811332.1| recombination protein RecR [Escherichia coli O157:H7 str. EC869]
gi|168798038|ref|ZP_02823045.1| recombination protein RecR [Escherichia coli O157:H7 str. EC508]
gi|170021140|ref|YP_001726094.1| recombination protein RecR [Escherichia coli ATCC 8739]
gi|170080057|ref|YP_001729377.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B]
gi|170682989|ref|YP_001742616.1| recombination protein RecR [Escherichia coli SMS-3-5]
gi|187730170|ref|YP_001879181.1| recombination protein RecR [Shigella boydii CDC 3083-94]
gi|188491938|ref|ZP_02999208.1| recombination protein RecR [Escherichia coli 53638]
gi|191167493|ref|ZP_03029306.1| recombination protein RecR [Escherichia coli B7A]
gi|193064133|ref|ZP_03045217.1| recombination protein RecR [Escherichia coli E22]
gi|193067582|ref|ZP_03048549.1| recombination protein RecR [Escherichia coli E110019]
gi|194429036|ref|ZP_03061568.1| recombination protein RecR [Escherichia coli B171]
gi|194437506|ref|ZP_03069603.1| recombination protein RecR [Escherichia coli 101-1]
gi|195936035|ref|ZP_03081417.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4024]
gi|208806900|ref|ZP_03249237.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4206]
gi|208814945|ref|ZP_03256124.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4045]
gi|208822864|ref|ZP_03263182.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4042]
gi|209396018|ref|YP_002269122.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4115]
gi|209917688|ref|YP_002291772.1| recombination protein RecR [Escherichia coli SE11]
gi|215485552|ref|YP_002327983.1| recombination protein RecR [Escherichia coli O127:H6 str. E2348/69]
gi|217325942|ref|ZP_03442026.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14588]
gi|218549860|ref|YP_002383651.1| recombination protein RecR [Escherichia fergusonii ATCC 35469]
gi|218553038|ref|YP_002385951.1| recombination protein RecR [Escherichia coli IAI1]
gi|218557382|ref|YP_002390295.1| recombination protein RecR [Escherichia coli S88]
gi|218688335|ref|YP_002396547.1| recombination protein RecR [Escherichia coli ED1a]
gi|218693934|ref|YP_002401601.1| recombination protein RecR [Escherichia coli 55989]
gi|218698616|ref|YP_002406245.1| recombination protein RecR [Escherichia coli IAI39]
gi|227884515|ref|ZP_04002320.1| recombination protein RecR [Escherichia coli 83972]
gi|237707530|ref|ZP_04538011.1| recombination protein recR [Escherichia sp. 3_2_53FAA]
gi|238899759|ref|YP_002925555.1| gap repair protein [Escherichia coli BW2952]
gi|253774538|ref|YP_003037369.1| recombination protein RecR [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160541|ref|YP_003043649.1| recombination protein RecR [Escherichia coli B str. REL606]
gi|254791655|ref|YP_003076492.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14359]
gi|256020443|ref|ZP_05434308.1| recombination protein RecR [Shigella sp. D9]
gi|256023910|ref|ZP_05437775.1| recombination protein RecR [Escherichia sp. 4_1_40B]
gi|260842672|ref|YP_003220450.1| gap repair protein RecR [Escherichia coli O103:H2 str. 12009]
gi|260853695|ref|YP_003227586.1| gap repair protein RecR [Escherichia coli O26:H11 str. 11368]
gi|260866633|ref|YP_003233035.1| gap repair protein RecR [Escherichia coli O111:H- str. 11128]
gi|261223954|ref|ZP_05938235.1| gap repair protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261256332|ref|ZP_05948865.1| gap repair protein RecR [Escherichia coli O157:H7 str. FRIK966]
gi|291281378|ref|YP_003498196.1| Recombination protein recR [Escherichia coli O55:H7 str. CB9615]
gi|293408621|ref|ZP_06652460.1| recombination protein RecR [Escherichia coli B354]
gi|293413725|ref|ZP_06656374.1| recombination protein RecR [Escherichia coli B185]
gi|293418541|ref|ZP_06660976.1| recombination protein RecR [Escherichia coli B088]
gi|297519065|ref|ZP_06937451.1| recombination protein RecR [Escherichia coli OP50]
gi|300818194|ref|ZP_07098405.1| recombination protein RecR [Escherichia coli MS 107-1]
gi|300820281|ref|ZP_07100433.1| recombination protein RecR [Escherichia coli MS 119-7]
gi|300903257|ref|ZP_07121186.1| recombination protein RecR [Escherichia coli MS 84-1]
gi|300919877|ref|ZP_07136344.1| recombination protein RecR [Escherichia coli MS 115-1]
gi|300924200|ref|ZP_07140192.1| recombination protein RecR [Escherichia coli MS 182-1]
gi|300930223|ref|ZP_07145637.1| recombination protein RecR [Escherichia coli MS 187-1]
gi|300935750|ref|ZP_07150715.1| recombination protein RecR [Escherichia coli MS 21-1]
gi|300947871|ref|ZP_07162021.1| recombination protein RecR [Escherichia coli MS 116-1]
gi|300958041|ref|ZP_07170205.1| recombination protein RecR [Escherichia coli MS 175-1]
gi|300987888|ref|ZP_07178437.1| recombination protein RecR [Escherichia coli MS 45-1]
gi|301022521|ref|ZP_07186395.1| recombination protein RecR [Escherichia coli MS 69-1]
gi|301023019|ref|ZP_07186829.1| recombination protein RecR [Escherichia coli MS 196-1]
gi|301049681|ref|ZP_07196629.1| recombination protein RecR [Escherichia coli MS 185-1]
gi|301301626|ref|ZP_07207761.1| recombination protein RecR [Escherichia coli MS 124-1]
gi|301330660|ref|ZP_07223262.1| recombination protein RecR [Escherichia coli MS 78-1]
gi|301647401|ref|ZP_07247211.1| recombination protein RecR [Escherichia coli MS 146-1]
gi|306813061|ref|ZP_07447254.1| recombination protein RecR [Escherichia coli NC101]
gi|307137116|ref|ZP_07496472.1| recombination protein RecR [Escherichia coli H736]
gi|307314967|ref|ZP_07594556.1| recombination protein RecR [Escherichia coli W]
gi|309794792|ref|ZP_07689213.1| recombination protein RecR [Escherichia coli MS 145-7]
gi|312964463|ref|ZP_07778757.1| recombination protein RecR [Escherichia coli 2362-75]
gi|312970571|ref|ZP_07784752.1| recombination protein RecR [Escherichia coli 1827-70]
gi|331640996|ref|ZP_08342131.1| recombination protein RecR [Escherichia coli H736]
gi|331645658|ref|ZP_08346761.1| recombination protein RecR [Escherichia coli M605]
gi|331651412|ref|ZP_08352437.1| recombination protein RecR [Escherichia coli M718]
gi|331656530|ref|ZP_08357492.1| recombination protein RecR [Escherichia coli TA206]
gi|331661855|ref|ZP_08362778.1| recombination protein RecR [Escherichia coli TA143]
gi|331666832|ref|ZP_08367706.1| recombination protein RecR [Escherichia coli TA271]
gi|331672014|ref|ZP_08372810.1| recombination protein RecR [Escherichia coli TA280]
gi|331676146|ref|ZP_08376858.1| recombination protein RecR [Escherichia coli H591]
gi|332281624|ref|ZP_08394037.1| recombination protein recR [Shigella sp. D9]
gi|67471985|sp|P0A7H6|RECR_ECOLI RecName: Full=Recombination protein recR
gi|67471986|sp|P0A7H7|RECR_ECOL6 RecName: Full=Recombination protein recR
gi|67471987|sp|P0A7H8|RECR_ECO57 RecName: Full=Recombination protein recR
gi|67471988|sp|P0A7H9|RECR_SHIFL RecName: Full=Recombination protein recR
gi|122424726|sp|Q1RF63|RECR_ECOUT RecName: Full=Recombination protein recR
gi|123343097|sp|Q0T7B2|RECR_SHIF8 RecName: Full=Recombination protein recR
gi|123617861|sp|Q3Z4S7|RECR_SHISS RecName: Full=Recombination protein recR
gi|166221937|sp|A1A8D8|RECR_ECOK1 RecName: Full=Recombination protein recR
gi|166918738|sp|A7ZIN2|RECR_ECO24 RecName: Full=Recombination protein recR
gi|166918739|sp|A7ZXD0|RECR_ECOHS RecName: Full=Recombination protein recR
gi|189029361|sp|B1IZC2|RECR_ECOLC RecName: Full=Recombination protein recR
gi|226726302|sp|B5Z3Y2|RECR_ECO5E RecName: Full=Recombination protein recR
gi|226726303|sp|B6I0C4|RECR_ECOSE RecName: Full=Recombination protein recR
gi|226738999|sp|B7MDZ4|RECR_ECO45 RecName: Full=Recombination protein recR
gi|226739000|sp|B7NIF8|RECR_ECO7I RecName: Full=Recombination protein recR
gi|226739001|sp|B7M3W4|RECR_ECO8A RecName: Full=Recombination protein recR
gi|226739003|sp|B1LJM9|RECR_ECOSM RecName: Full=Recombination protein recR
gi|226739004|sp|B7LLP8|RECR_ESCF3 RecName: Full=Recombination protein recR
gi|229470342|sp|B2U4S5|RECR_SHIB3 RecName: Full=Recombination protein recR
gi|229890148|sp|B1XFQ9|RECR_ECODH RecName: Full=Recombination protein recR
gi|254790766|sp|B7UKF2|RECR_ECO27 RecName: Full=Recombination protein recR
gi|254790767|sp|B7L797|RECR_ECO55 RecName: Full=Recombination protein recR
gi|254790768|sp|B7MQI7|RECR_ECO81 RecName: Full=Recombination protein recR
gi|259563694|sp|C4ZUS6|RECR_ECOBW RecName: Full=Recombination protein recR
gi|12513342|gb|AAG54821.1|AE005226_4 recombination and repair [Escherichia coli O157:H7 str. EDL933]
gi|42697|emb|CAA33768.1| unnamed protein product [Escherichia coli K-12]
gi|1773154|gb|AAB40226.1| recR [Escherichia coli]
gi|1786678|gb|AAC73574.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655]
gi|13359982|dbj|BAB33948.1| recombination protein RecR [Escherichia coli O157:H7 str. Sakai]
gi|24050650|gb|AAN42072.1| recombination protein RecR [Shigella flexneri 2a str. 301]
gi|30040216|gb|AAP15949.1| recombination protein RecR [Shigella flexneri 2a str. 2457T]
gi|73854528|gb|AAZ87235.1| recombination and repair [Shigella sonnei Ss046]
gi|85674611|dbj|BAE76251.1| gap repair protein [Escherichia coli str. K12 substr. W3110]
gi|91071120|gb|ABE06001.1| recombination and repair protein RecR [Escherichia coli UTI89]
gi|110614047|gb|ABF02714.1| recombination and repair [Shigella flexneri 5 str. 8401]
gi|115511853|gb|ABI99927.1| recombination protein RecR [Escherichia coli APEC O1]
gi|157065679|gb|ABV04934.1| recombination protein RecR [Escherichia coli HS]
gi|157079859|gb|ABV19567.1| recombination protein RecR [Escherichia coli E24377A]
gi|169756068|gb|ACA78767.1| recombination protein RecR [Escherichia coli ATCC 8739]
gi|169887892|gb|ACB01599.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B]
gi|170520707|gb|ACB18885.1| recombination protein RecR [Escherichia coli SMS-3-5]
gi|187427162|gb|ACD06436.1| recombination protein RecR [Shigella boydii CDC 3083-94]
gi|187767554|gb|EDU31398.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4196]
gi|188017689|gb|EDU55811.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4113]
gi|188487137|gb|EDU62240.1| recombination protein RecR [Escherichia coli 53638]
gi|189002997|gb|EDU71983.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4076]
gi|189357959|gb|EDU76378.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4401]
gi|189362411|gb|EDU80830.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4486]
gi|189369096|gb|EDU87512.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4501]
gi|189373699|gb|EDU92115.1| recombination protein RecR [Escherichia coli O157:H7 str. EC869]
gi|189379340|gb|EDU97756.1| recombination protein RecR [Escherichia coli O157:H7 str. EC508]
gi|190902449|gb|EDV62185.1| recombination protein RecR [Escherichia coli B7A]
gi|192929162|gb|EDV82772.1| recombination protein RecR [Escherichia coli E22]
gi|192958994|gb|EDV89430.1| recombination protein RecR [Escherichia coli E110019]
gi|194412973|gb|EDX29263.1| recombination protein RecR [Escherichia coli B171]
gi|194423675|gb|EDX39665.1| recombination protein RecR [Escherichia coli 101-1]
gi|208726701|gb|EDZ76302.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4206]
gi|208731593|gb|EDZ80281.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4045]
gi|208737057|gb|EDZ84741.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4042]
gi|209157418|gb|ACI34851.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4115]
gi|209778368|gb|ACI87496.1| recombination protein RecR [Escherichia coli]
gi|209778370|gb|ACI87497.1| recombination protein RecR [Escherichia coli]
gi|209778372|gb|ACI87498.1| recombination protein RecR [Escherichia coli]
gi|209778374|gb|ACI87499.1| recombination protein RecR [Escherichia coli]
gi|209778376|gb|ACI87500.1| recombination protein RecR [Escherichia coli]
gi|209910947|dbj|BAG76021.1| recombination protein RecR [Escherichia coli SE11]
gi|215263624|emb|CAS07955.1| gap repair protein RecR [Escherichia coli O127:H6 str. E2348/69]
gi|217322163|gb|EEC30587.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14588]
gi|218350666|emb|CAU96358.1| gap repair protein [Escherichia coli 55989]
gi|218357401|emb|CAQ90040.1| gap repair protein [Escherichia fergusonii ATCC 35469]
gi|218359806|emb|CAQ97347.1| gap repair protein [Escherichia coli IAI1]
gi|218364151|emb|CAR01816.1| gap repair protein [Escherichia coli S88]
gi|218368602|emb|CAR16339.1| gap repair protein [Escherichia coli IAI39]
gi|218425899|emb|CAR06705.1| gap repair protein [Escherichia coli ED1a]
gi|222032266|emb|CAP75005.1| Recombination protein recR [Escherichia coli LF82]
gi|226898740|gb|EEH84999.1| recombination protein recR [Escherichia sp. 3_2_53FAA]
gi|227838601|gb|EEJ49067.1| recombination protein RecR [Escherichia coli 83972]
gi|238861286|gb|ACR63284.1| gap repair protein [Escherichia coli BW2952]
gi|253325582|gb|ACT30184.1| recombination protein RecR [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972442|gb|ACT38113.1| recombination protein RecR [Escherichia coli B str. REL606]
gi|253976652|gb|ACT42322.1| recombination protein RecR [Escherichia coli BL21(DE3)]
gi|254591055|gb|ACT70416.1| gap repair protein [Escherichia coli O157:H7 str. TW14359]
gi|257752344|dbj|BAI23846.1| gap repair protein RecR [Escherichia coli O26:H11 str. 11368]
gi|257757819|dbj|BAI29316.1| gap repair protein RecR [Escherichia coli O103:H2 str. 12009]
gi|257762989|dbj|BAI34484.1| gap repair protein RecR [Escherichia coli O111:H- str. 11128]
gi|260450342|gb|ACX40764.1| recombination protein RecR [Escherichia coli DH1]
gi|281177642|dbj|BAI53972.1| recombination protein RecR [Escherichia coli SE15]
gi|281599811|gb|ADA72795.1| Recombination protein recR [Shigella flexneri 2002017]
gi|284920281|emb|CBG33340.1| recombination protein [Escherichia coli 042]
gi|290761251|gb|ADD55212.1| Recombination protein recR [Escherichia coli O55:H7 str. CB9615]
gi|291325069|gb|EFE64484.1| recombination protein RecR [Escherichia coli B088]
gi|291433783|gb|EFF06756.1| recombination protein RecR [Escherichia coli B185]
gi|291471799|gb|EFF14282.1| recombination protein RecR [Escherichia coli B354]
gi|294493990|gb|ADE92746.1| recombination protein RecR [Escherichia coli IHE3034]
gi|299880982|gb|EFI89193.1| recombination protein RecR [Escherichia coli MS 196-1]
gi|300298574|gb|EFJ54959.1| recombination protein RecR [Escherichia coli MS 185-1]
gi|300315308|gb|EFJ65092.1| recombination protein RecR [Escherichia coli MS 175-1]
gi|300397482|gb|EFJ81020.1| recombination protein RecR [Escherichia coli MS 69-1]
gi|300404696|gb|EFJ88234.1| recombination protein RecR [Escherichia coli MS 84-1]
gi|300407628|gb|EFJ91166.1| recombination protein RecR [Escherichia coli MS 45-1]
gi|300413093|gb|EFJ96403.1| recombination protein RecR [Escherichia coli MS 115-1]
gi|300419653|gb|EFK02964.1| recombination protein RecR [Escherichia coli MS 182-1]
gi|300452549|gb|EFK16169.1| recombination protein RecR [Escherichia coli MS 116-1]
gi|300459050|gb|EFK22543.1| recombination protein RecR [Escherichia coli MS 21-1]
gi|300461878|gb|EFK25371.1| recombination protein RecR [Escherichia coli MS 187-1]
gi|300527066|gb|EFK48135.1| recombination protein RecR [Escherichia coli MS 119-7]
gi|300529085|gb|EFK50147.1| recombination protein RecR [Escherichia coli MS 107-1]
gi|300843123|gb|EFK70883.1| recombination protein RecR [Escherichia coli MS 124-1]
gi|300843321|gb|EFK71081.1| recombination protein RecR [Escherichia coli MS 78-1]
gi|301074456|gb|EFK89262.1| recombination protein RecR [Escherichia coli MS 146-1]
gi|305853824|gb|EFM54263.1| recombination protein RecR [Escherichia coli NC101]
gi|306905606|gb|EFN36137.1| recombination protein RecR [Escherichia coli W]
gi|307552378|gb|ADN45153.1| recombination and repair protein RecR [Escherichia coli ABU 83972]
gi|307628059|gb|ADN72363.1| recombination protein RecR [Escherichia coli UM146]
gi|308121445|gb|EFO58707.1| recombination protein RecR [Escherichia coli MS 145-7]
gi|309700732|emb|CBJ00028.1| recombination protein [Escherichia coli ETEC H10407]
gi|310337220|gb|EFQ02358.1| recombination protein RecR [Escherichia coli 1827-70]
gi|312290940|gb|EFR18816.1| recombination protein RecR [Escherichia coli 2362-75]
gi|312945049|gb|ADR25876.1| recombination protein RecR [Escherichia coli O83:H1 str. NRG 857C]
gi|313646898|gb|EFS11355.1| recombination protein RecR [Shigella flexneri 2a str. 2457T]
gi|313848552|emb|CAQ30945.2| recombination and repair, subunit of RecFOR complex [Escherichia
coli BL21(DE3)]
gi|315059751|gb|ADT74078.1| gap repair protein [Escherichia coli W]
gi|315135153|dbj|BAJ42312.1| recombination protein recR [Escherichia coli DH1]
gi|315256302|gb|EFU36270.1| recombination protein RecR [Escherichia coli MS 85-1]
gi|315289905|gb|EFU49295.1| recombination protein RecR [Escherichia coli MS 110-3]
gi|315294236|gb|EFU53587.1| recombination protein RecR [Escherichia coli MS 153-1]
gi|315297998|gb|EFU57268.1| recombination protein RecR [Escherichia coli MS 16-3]
gi|315616586|gb|EFU97203.1| recombination protein RecR [Escherichia coli 3431]
gi|320176554|gb|EFW51598.1| Recombination protein RecR [Shigella dysenteriae CDC 74-1112]
gi|320181085|gb|EFW56005.1| Recombination protein RecR [Shigella boydii ATCC 9905]
gi|320192890|gb|EFW67530.1| Recombination protein RecR [Escherichia coli O157:H7 str. EC1212]
gi|320197051|gb|EFW71670.1| Recombination protein RecR [Escherichia coli WV_060327]
gi|320201718|gb|EFW76294.1| Recombination protein RecR [Escherichia coli EC4100B]
gi|320638466|gb|EFX08180.1| recombination protein RecR [Escherichia coli O157:H7 str. G5101]
gi|320643847|gb|EFX12970.1| recombination protein RecR [Escherichia coli O157:H- str. 493-89]
gi|320649198|gb|EFX17776.1| recombination protein RecR [Escherichia coli O157:H- str. H 2687]
gi|320656091|gb|EFX24007.1| recombination protein RecR [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661241|gb|EFX28672.1| recombination protein RecR [Escherichia coli O55:H7 str. USDA 5905]
gi|320665217|gb|EFX32310.1| recombination protein RecR [Escherichia coli O157:H7 str. LSU-61]
gi|323153374|gb|EFZ39629.1| recombination protein RecR [Escherichia coli EPECa14]
gi|323164278|gb|EFZ50085.1| recombination protein RecR [Shigella sonnei 53G]
gi|323170568|gb|EFZ56218.1| recombination protein RecR [Escherichia coli LT-68]
gi|323178253|gb|EFZ63831.1| recombination protein RecR [Escherichia coli 1180]
gi|323184697|gb|EFZ70068.1| recombination protein RecR [Escherichia coli 1357]
gi|323379684|gb|ADX51952.1| recombination protein RecR [Escherichia coli KO11]
gi|323938658|gb|EGB34907.1| recombination protein RecR [Escherichia coli E1520]
gi|323943277|gb|EGB39433.1| recombination protein RecR [Escherichia coli E482]
gi|323945255|gb|EGB41312.1| recombination protein RecR [Escherichia coli H120]
gi|323952917|gb|EGB48785.1| recombination protein RecR [Escherichia coli H252]
gi|323958540|gb|EGB54244.1| recombination protein RecR [Escherichia coli H263]
gi|323963461|gb|EGB59023.1| recombination protein RecR [Escherichia coli H489]
gi|323965158|gb|EGB60617.1| recombination protein RecR [Escherichia coli M863]
gi|323972326|gb|EGB67536.1| recombination protein RecR [Escherichia coli TA007]
gi|323976044|gb|EGB71137.1| recombination protein RecR [Escherichia coli TW10509]
gi|324010053|gb|EGB79272.1| recombination protein RecR [Escherichia coli MS 57-2]
gi|324016728|gb|EGB85947.1| recombination protein RecR [Escherichia coli MS 117-3]
gi|324114697|gb|EGC08665.1| recombination protein RecR [Escherichia fergusonii B253]
gi|324116960|gb|EGC10873.1| recombination protein RecR [Escherichia coli E1167]
gi|325498240|gb|EGC96099.1| recombination protein RecR [Escherichia fergusonii ECD227]
gi|326341238|gb|EGD65030.1| Recombination protein RecR [Escherichia coli O157:H7 str. 1044]
gi|326345987|gb|EGD69726.1| Recombination protein RecR [Escherichia coli O157:H7 str. 1125]
gi|327254799|gb|EGE66415.1| recombination protein RecR [Escherichia coli STEC_7v]
gi|330910267|gb|EGH38777.1| recombination protein RecR [Escherichia coli AA86]
gi|331037794|gb|EGI10014.1| recombination protein RecR [Escherichia coli H736]
gi|331044410|gb|EGI16537.1| recombination protein RecR [Escherichia coli M605]
gi|331051153|gb|EGI23205.1| recombination protein RecR [Escherichia coli M718]
gi|331054778|gb|EGI26787.1| recombination protein RecR [Escherichia coli TA206]
gi|331060277|gb|EGI32241.1| recombination protein RecR [Escherichia coli TA143]
gi|331066056|gb|EGI37940.1| recombination protein RecR [Escherichia coli TA271]
gi|331071003|gb|EGI42362.1| recombination protein RecR [Escherichia coli TA280]
gi|331076204|gb|EGI47486.1| recombination protein RecR [Escherichia coli H591]
gi|332094161|gb|EGI99212.1| recombination protein RecR [Shigella boydii 5216-82]
gi|332103976|gb|EGJ07322.1| recombination protein recR [Shigella sp. D9]
gi|332341838|gb|AEE55172.1| recombination protein RecR [Escherichia coli UMNK88]
gi|332760765|gb|EGJ91053.1| recombination protein RecR [Shigella flexneri 4343-70]
gi|332761449|gb|EGJ91731.1| recombination protein RecR [Shigella flexneri 2747-71]
gi|332763775|gb|EGJ94013.1| recombination protein RecR [Shigella flexneri K-671]
gi|332768397|gb|EGJ98581.1| recombination protein RecR [Shigella flexneri 2930-71]
gi|333007767|gb|EGK27243.1| recombination protein RecR [Shigella flexneri K-218]
gi|333008162|gb|EGK27637.1| recombination protein RecR [Shigella flexneri VA-6]
gi|333009908|gb|EGK29343.1| recombination protein RecR [Shigella flexneri K-272]
gi|333020742|gb|EGK40002.1| recombination protein RecR [Shigella flexneri K-227]
gi|333021968|gb|EGK41216.1| recombination protein RecR [Shigella flexneri K-304]
Length = 201
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|149179095|ref|ZP_01857667.1| recombinant protein RecR [Planctomyces maris DSM 8797]
gi|148842086|gb|EDL56477.1| recombinant protein RecR [Planctomyces maris DSM 8797]
Length = 192
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 111/187 (59%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI A +PG G +SA R +++ E LA+A+ + V CS+C N+ +
Sbjct: 3 QLIDQFATLPGIGRKSAERLAHYILSIPEPEARQLADAINAVKQSVRPCSVCYNLTEQEV 62
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D +RD ++ VVE D+ +LE + + +YHVL G +SPL+ IGPE++ I +LI
Sbjct: 63 CTICSDSRRDKKLVCVVESPRDVVSLEATSSFQGVYHVLQGRISPLEGIGPENLTINALI 122
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R++ + E+I A + T+EG TA YI + L+ +V+ITRLA GI GS L++ + +
Sbjct: 123 RRVKQDGVTEMIMATNPTLEGDGTALYISNLLEHENVEITRLARGIASGSVLEFANKEML 182
Query: 192 FEAIRSR 198
+A++ R
Sbjct: 183 SDALQGR 189
>gi|91223618|ref|ZP_01258883.1| recombination protein RecR [Vibrio alginolyticus 12G01]
gi|269966014|ref|ZP_06180106.1| recombination protein RecR [Vibrio alginolyticus 40B]
gi|91191704|gb|EAS77968.1| recombination protein RecR [Vibrio alginolyticus 12G01]
gi|269829410|gb|EEZ83652.1| recombination protein RecR [Vibrio alginolyticus 40B]
Length = 199
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCKEHQVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|323191138|gb|EFZ76402.1| recombination protein RecR [Escherichia coli RN587/1]
Length = 201
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|330829301|ref|YP_004392253.1| Gap repair protein with type I DNA topoisomerase domain [Aeromonas
veronii B565]
gi|328804437|gb|AEB49636.1| Gap repair protein with type I DNA topoisomerase domain [Aeromonas
veronii B565]
Length = 200
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ ++K L +PG GP+SA+R L++++ LA+ ++ ++ CS C
Sbjct: 7 LDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLSRALTEIGHCSHCRTFTEN 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R+ + ++ VVE AD+ A+E++ + Y VL G LSPLD IGPE++G+
Sbjct: 67 DRCDICANPKREENGLLCVVESPADVAAIEQTGQFSGRYFVLMGHLSPLDGIGPEELGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ + I ELI A + TIEG TA YI D + V+++R+A+G+P+G EL+ +D
Sbjct: 127 ILERRLKEEHISELILATNPTIEGDATAWYIADMARTAGVEVSRIAHGVPVGGELELVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLMGRQRL 199
>gi|37527699|ref|NP_931043.1| recombination protein RecR [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|73621503|sp|Q7N0P2|RECR_PHOLL RecName: Full=Recombination protein recR
gi|36787134|emb|CAE16211.1| Recombination protein RecR [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 201
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRNRSGGMRLAQALTRAMSEIGHCKYCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EQCTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEDRLATEEISEVILATNPTVEGEATANYIAEICVQYGVTASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|191173682|ref|ZP_03035206.1| recombination protein RecR [Escherichia coli F11]
gi|300997164|ref|ZP_07181660.1| recombination protein RecR [Escherichia coli MS 200-1]
gi|190906040|gb|EDV65655.1| recombination protein RecR [Escherichia coli F11]
gi|300304299|gb|EFJ58819.1| recombination protein RecR [Escherichia coli MS 200-1]
gi|324010644|gb|EGB79863.1| recombination protein RecR [Escherichia coli MS 60-1]
Length = 201
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRKENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|49082740|gb|AAT50770.1| PA1534 [synthetic construct]
Length = 199
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVEGPLDVFAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+ +D G
Sbjct: 126 LEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|319950863|ref|ZP_08024746.1| recombination protein RecR [Dietzia cinnamea P4]
gi|319435476|gb|EFV90713.1| recombination protein RecR [Dietzia cinnamea P4]
Length = 268
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++NLI ++PG GP+SA+R HL++ + + + L A+ + V C +CG V
Sbjct: 6 VQNLIDEFGKLPGIGPKSAQRLAFHLLQAEPESVERLRSALQAVVEGVTYCEVCGTVAAA 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D +RD ++I VVE+ D+ A+ER++ LYHVLGG+L P++ IGP ++ I
Sbjct: 66 GRCRICSDPRRDPTLICVVEEPKDIEAIERTREFRGLYHVLGGALDPINGIGPNELRIAG 125
Query: 130 LIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
L+ R+ E ++I E+I A G+ T+ Y+ L+ D+ ++RLA G+PMG++L+
Sbjct: 126 LMRRVGAEVEGEEIAEIIIATDPNTTGEATSTYLARLLRPFPDLIVSRLASGLPMGADLE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ A+ R +L
Sbjct: 186 FADELTLGSALSGRRIL 202
>gi|190149343|ref|YP_001967868.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307262657|ref|ZP_07544286.1| hypothetical protein appser13_850 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914474|gb|ACE60726.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871985|gb|EFN03700.1| hypothetical protein appser13_850 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 221
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENLI+ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 27 LENLIEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEE 86
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 87 DECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 146
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ +D
Sbjct: 147 LLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDG 206
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 207 TTLSHSFAGR 216
>gi|15596731|ref|NP_250225.1| recombination protein RecR [Pseudomonas aeruginosa PAO1]
gi|107100965|ref|ZP_01364883.1| hypothetical protein PaerPA_01001995 [Pseudomonas aeruginosa PACS2]
gi|218892510|ref|YP_002441377.1| recombination protein RecR [Pseudomonas aeruginosa LESB58]
gi|254234636|ref|ZP_04927959.1| recombination protein RecR [Pseudomonas aeruginosa C3719]
gi|254239882|ref|ZP_04933204.1| recombination protein RecR [Pseudomonas aeruginosa 2192]
gi|313106539|ref|ZP_07792767.1| recombination protein RecR [Pseudomonas aeruginosa 39016]
gi|20139743|sp|Q9I3H9|RECR_PSEAE RecName: Full=Recombination protein recR
gi|226739007|sp|B7UVI8|RECR_PSEA8 RecName: Full=Recombination protein recR
gi|9947493|gb|AAG04923.1|AE004582_1 recombination protein RecR [Pseudomonas aeruginosa PAO1]
gi|126166567|gb|EAZ52078.1| recombination protein RecR [Pseudomonas aeruginosa C3719]
gi|126193260|gb|EAZ57323.1| recombination protein RecR [Pseudomonas aeruginosa 2192]
gi|218772736|emb|CAW28521.1| recombination protein RecR [Pseudomonas aeruginosa LESB58]
gi|310879269|gb|EFQ37863.1| recombination protein RecR [Pseudomonas aeruginosa 39016]
Length = 198
Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVEGPLDVFAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+ +D G
Sbjct: 126 LEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|119469547|ref|ZP_01612451.1| recombination protein recR [Alteromonadales bacterium TW-7]
gi|119447082|gb|EAW28352.1| recombination protein recR [Alteromonadales bacterium TW-7]
Length = 202
Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L PG GP+SA+R HL+++ + L A+ + C +C
Sbjct: 7 LNQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGSALTKAMTAIGHCQMCRTFCEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R D+ + VVE D+ A+E++ LY VL G LSP+D IGP++IG+
Sbjct: 67 PQCDICLSTKRQDSGTLCVVESPTDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +++ I E+I A + ++EG+TTAHYI +V +R+A+GIP+G ELD +D
Sbjct: 127 VLEQKLSQGGINEVILATNPSVEGETTAHYIAQLCHKNNVGASRIAHGIPVGGELDLVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ A R V+
Sbjct: 187 RTLMHAFSGRRVV 199
>gi|331681867|ref|ZP_08382500.1| recombination protein RecR [Escherichia coli H299]
gi|331081069|gb|EGI52234.1| recombination protein RecR [Escherichia coli H299]
Length = 201
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEH 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|271499627|ref|YP_003332652.1| recombination protein RecR [Dickeya dadantii Ech586]
gi|270343182|gb|ACZ75947.1| recombination protein RecR [Dickeya dadantii Ech586]
Length = 201
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C+IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 DVCSICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLASETISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|77360146|ref|YP_339721.1| recombination protein recR [Pseudoalteromonas haloplanktis TAC125]
gi|123589320|sp|Q3IKN2|RECR_PSEHT RecName: Full=Recombination protein recR
gi|76875057|emb|CAI86278.1| recombination protein recR [Pseudoalteromonas haloplanktis TAC125]
Length = 202
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L PG GP+SA+R HL+++ + L A+ V C C
Sbjct: 7 LTQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAVGHCESCRTFCEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R D+ ++ VVE +D+ A+E++ LY VL G LSP+D IGP++IG+
Sbjct: 67 SQCDICLSTKRQDSGILCVVESPSDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ++ I E+I A + T+EG+TTAHYI V +R+A+GIP+G ELD +D
Sbjct: 127 VLETKLAQSGISEVILATNPTVEGETTAHYIAQLCHKYKVGASRIAHGIPVGGELDLVDG 186
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 187 TTLMHAFSGR 196
>gi|25026767|ref|NP_736821.1| recombination protein RecR [Corynebacterium efficiens YS-314]
gi|259508096|ref|ZP_05750996.1| RecR protein [Corynebacterium efficiens YS-314]
gi|73621481|sp|Q8FU10|RECR_COREF RecName: Full=Recombination protein recR
gi|23492046|dbj|BAC17021.1| putative recombination protein [Corynebacterium efficiens YS-314]
gi|259164319|gb|EEW48873.1| RecR protein [Corynebacterium efficiens YS-314]
Length = 218
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 116/213 (54%), Gaps = 21/213 (9%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L+R+PG GP+SA+R HL+ + L +A+ + + V C IC N+
Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHLLNVDPDDITRLQDALGAVRDGVRFCRICCNISRD 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D RD +I VVE+ D+ +ER+ YHVLGG+L PL +GP ++ I +
Sbjct: 66 EVCRICNDSGRDRGLICVVEEPKDIQVIERTGEFRGRYHVLGGALDPLANVGPRELTIST 125
Query: 130 LIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
L++RI + +I E+I A EG+ TA Y+ L+ D+
Sbjct: 126 LLQRIGGVLDDRELADSTPDTPLLDDKPQIHEVILATDPNTEGEATASYLARLLQDFPDL 185
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 186 VVSRLASGMPLGGDLEFVDELTLSRALSGRLPL 218
>gi|283834202|ref|ZP_06353943.1| recombination protein RecR [Citrobacter youngae ATCC 29220]
gi|291070355|gb|EFE08464.1| recombination protein RecR [Citrobacter youngae ATCC 29220]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++I ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLASEQINELILATNPTVEGEATANYIAELCMQYGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|62179097|ref|YP_215514.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|73621513|sp|Q57S78|RECR_SALCH RecName: Full=Recombination protein recR
gi|62126730|gb|AAX64433.1| putative recombination protein, gap repair [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322713558|gb|EFZ05129.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFPGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|28898951|ref|NP_798556.1| recombination protein RecR [Vibrio parahaemolyticus RIMD 2210633]
gi|153838680|ref|ZP_01991347.1| recombination protein RecR [Vibrio parahaemolyticus AQ3810]
gi|260364435|ref|ZP_05777064.1| recombination protein RecR [Vibrio parahaemolyticus K5030]
gi|260878851|ref|ZP_05891206.1| recombination protein RecR [Vibrio parahaemolyticus AN-5034]
gi|260896227|ref|ZP_05904723.1| recombination protein RecR [Vibrio parahaemolyticus Peru-466]
gi|260900004|ref|ZP_05908399.1| recombination protein RecR [Vibrio parahaemolyticus AQ4037]
gi|31076898|sp|Q87MQ4|RECR_VIBPA RecName: Full=Recombination protein recR
gi|28807170|dbj|BAC60440.1| recombination protein RecR [Vibrio parahaemolyticus RIMD 2210633]
gi|149747900|gb|EDM58772.1| recombination protein RecR [Vibrio parahaemolyticus AQ3810]
gi|308088845|gb|EFO38540.1| recombination protein RecR [Vibrio parahaemolyticus Peru-466]
gi|308094239|gb|EFO43934.1| recombination protein RecR [Vibrio parahaemolyticus AN-5034]
gi|308107412|gb|EFO44952.1| recombination protein RecR [Vibrio parahaemolyticus AQ4037]
gi|308114583|gb|EFO52123.1| recombination protein RecR [Vibrio parahaemolyticus K5030]
gi|328474509|gb|EGF45314.1| recombination protein RecR [Vibrio parahaemolyticus 10329]
Length = 199
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCAECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCREHQVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|307129960|ref|YP_003881976.1| gap repair protein [Dickeya dadantii 3937]
gi|306527489|gb|ADM97419.1| gap repair protein [Dickeya dadantii 3937]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 DICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLATETISEVILATNPTVEGDATANYIAELCAENGVMASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|116049478|ref|YP_791719.1| recombination protein RecR [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390098|ref|ZP_06879573.1| recombination protein RecR [Pseudomonas aeruginosa PAb1]
gi|122258586|sp|Q02K17|RECR_PSEAB RecName: Full=Recombination protein recR
gi|115584699|gb|ABJ10714.1| recombination protein RecR [Pseudomonas aeruginosa UCBPP-PA14]
Length = 198
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVEGPLDVFAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+ +D G
Sbjct: 126 LEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|303250208|ref|ZP_07336409.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|171855133|sp|A3MYE6|RECR_ACTP2 RecName: Full=Recombination protein recR
gi|302650919|gb|EFL81074.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 7 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ +D
Sbjct: 127 LLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLSHSFAGR 196
>gi|327480434|gb|AEA83744.1| recombination protein RecR [Pseudomonas stutzeri DSM 4166]
Length = 199
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTRAMEGVGYCRQCRTLTED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVQSPVDVFAVEQT-GFRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ E+I A + T+EG+ TAHYI L + I+R+A+G+P+G ELD +D G
Sbjct: 126 LLGRVAGGAFSEVILATNPTVEGEATAHYIAQMLIPKGLTISRIAHGVPLGGELDLVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|183600057|ref|ZP_02961550.1| hypothetical protein PROSTU_03589 [Providencia stuartii ATCC 25827]
gi|188022342|gb|EDU60382.1| hypothetical protein PROSTU_03589 [Providencia stuartii ATCC 25827]
Length = 199
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP DIG+
Sbjct: 67 EVCNICENPRRQQNGLICVVESPADIYAVEQTGQFSGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSSETIIEVILATNPTVEGEATANYIAQMCAQYGVAASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLAGRQRL 199
>gi|303251897|ref|ZP_07338068.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302649327|gb|EFL79512.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 7 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 67 DECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ +D
Sbjct: 127 LLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLSHSFAGR 196
>gi|167719250|ref|ZP_02402486.1| recombination protein RecR [Burkholderia pseudomallei DM98]
Length = 189
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 101/181 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 9 LSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNTFTEA 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 69 QVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D G
Sbjct: 129 LVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAG 188
Query: 190 T 190
T
Sbjct: 189 T 189
>gi|268591258|ref|ZP_06125479.1| recombination protein RecR [Providencia rettgeri DSM 1131]
gi|291313229|gb|EFE53682.1| recombination protein RecR [Providencia rettgeri DSM 1131]
Length = 199
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + +I +VE AD++A+E++ + Y VL G LSPLD IGP DIG+
Sbjct: 67 EVCNICDNPRRQQNGLICIVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLASETINEVILATNPTVEGEATANYIGQMCAQYGVAASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLAGRQRL 199
>gi|194432682|ref|ZP_03064967.1| recombination protein RecR [Shigella dysenteriae 1012]
gi|194418944|gb|EDX35028.1| recombination protein RecR [Shigella dysenteriae 1012]
gi|332097006|gb|EGJ01990.1| recombination protein RecR [Shigella dysenteriae 155-74]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ + + C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSAIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|308185944|ref|YP_003930075.1| Recombination protein recR [Pantoea vagans C9-1]
gi|308056454|gb|ADO08626.1| Recombination protein recR [Pantoea vagans C9-1]
Length = 201
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 7 LESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|26246487|ref|NP_752526.1| recombination protein RecR [Escherichia coli CFT073]
gi|26106885|gb|AAN79070.1|AE016756_253 Recombination protein recR [Escherichia coli CFT073]
Length = 201
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD +A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADXYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|289549262|ref|YP_003474250.1| recombination protein RecR [Thermocrinis albus DSM 14484]
gi|289182879|gb|ADC90123.1| recombination protein RecR [Thermocrinis albus DSM 14484]
Length = 202
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 2/187 (1%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
+++L IP +G RSA R + +K + + + + + CS CG V TDPC
Sbjct: 15 LEVLTYIPTYGERSASRFVYNFLKLSPEERDEILKTLFELSRSARKCSECGLVSDTDPCR 74
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC D +R+ + VVE+ D +A+ER + +YHVLGG ++PL+ I ED+ I+ L+ R
Sbjct: 75 ICSDTKRNKRFLCVVEESQDAYAIERLERYTGVYHVLGGRIAPLEGISAEDLNIEGLLRR 134
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMD--KLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
IE ++E+I A + +EG+ TA+YI+ K + VK++R+++G+ GS ++ DD ++
Sbjct: 135 IENYGVKEVILATNPNVEGEATANYILSLIKKRFPSVKVSRISHGLQFGSLIELADDLSL 194
Query: 192 FEAIRSR 198
+I +R
Sbjct: 195 ERSIENR 201
>gi|308048900|ref|YP_003912466.1| recombination protein RecR [Ferrimonas balearica DSM 9799]
gi|307631090|gb|ADN75392.1| recombination protein RecR [Ferrimonas balearica DSM 9799]
Length = 199
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LIK L +PG GPRSA+R T L+++ L EA++ + V C C
Sbjct: 7 VDELIKALQCLPGVGPRSAQRMTFQLLERDRVAGTRLGEALSRAMSDVGHCQDCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + +R + + VVE ADL A+E S + Y VL G LSPLD IGP+DIG+
Sbjct: 67 TRCPICDNPRRAEKGQLCVVESPADLLAIESSGQYDGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + +E+I A + T+EG TA YI D + +++++R+A+G+P+G EL Y+D
Sbjct: 127 VLDRMLAEGPWQEIILATNPTVEGDATAQYIADMARQREIRVSRIAHGVPVGGELGYVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLALSFSGR 196
>gi|288818833|ref|YP_003433181.1| recombination protein [Hydrogenobacter thermophilus TK-6]
gi|288788233|dbj|BAI69980.1| recombination protein [Hydrogenobacter thermophilus TK-6]
gi|308752420|gb|ADO45903.1| recombination protein RecR [Hydrogenobacter thermophilus TK-6]
Length = 202
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 120/193 (62%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++ I+ + +IP +G R A R +L+K ++ + + N+ + C+ CG +
Sbjct: 9 KAMKEAIESIIKIPTYGERGASRFIYNLLKLPQEERIIIVNTLQNLAQSIKKCAECGLLT 68
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C+IC D++R I +VE+ D +A+ER + +YHVLGG ++PL+ I P+D+ I
Sbjct: 69 DREVCSICSDEKRSKKFICIVEESQDAYAIERLERYTGVYHVLGGRIAPLEGISPQDLSI 128
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185
SLI+RIE K +E+I A + +EG+ TA+Y++ LK ++KITR++YG+ G+ +++
Sbjct: 129 DSLIQRIERYKPKEVIVATNPNVEGEATANYLIKLLKRRFPNLKITRMSYGLQFGTLIEF 188
Query: 186 LDDGTIFEAIRSR 198
D+ ++ ++I +R
Sbjct: 189 ADELSLEKSIENR 201
>gi|165975531|ref|YP_001651124.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307244876|ref|ZP_07526974.1| hypothetical protein appser1_890 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247052|ref|ZP_07529105.1| hypothetical protein appser2_500 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307253830|ref|ZP_07535683.1| hypothetical protein appser9_890 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258286|ref|ZP_07540028.1| hypothetical protein appser11_900 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|165875632|gb|ABY68680.1| recombination DNA repair protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306854198|gb|EFM86405.1| hypothetical protein appser1_890 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856421|gb|EFM88571.1| hypothetical protein appser2_500 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306863190|gb|EFM95131.1| hypothetical protein appser9_890 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867625|gb|EFM99471.1| hypothetical protein appser11_900 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 221
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 27 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEE 86
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 87 DECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 146
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ +D
Sbjct: 147 LLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDG 206
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 207 TTLSHSFAGR 216
>gi|146282185|ref|YP_001172338.1| recombination protein RecR [Pseudomonas stutzeri A1501]
gi|166221957|sp|A4VKJ5|RECR_PSEU5 RecName: Full=Recombination protein recR
gi|145570390|gb|ABP79496.1| recombination protein RecR [Pseudomonas stutzeri A1501]
Length = 199
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTRAMEGVGYCRQCRTLTED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVQSPVDVFAVEQT-GFRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ E+I A + T+EG+ TAHYI L + I+R+A+G+P+G ELD +D G
Sbjct: 126 LLGRVADGAFSEVILATNPTVEGEATAHYIAQMLIPKGLTISRIAHGVPLGGELDLVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|332295104|ref|YP_004437027.1| Recombination protein recR [Thermodesulfobium narugense DSM 14796]
gi|332178207|gb|AEE13896.1| Recombination protein recR [Thermodesulfobium narugense DSM 14796]
Length = 203
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 7/197 (3%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + +L L+ +PG GP+ A R + ++ E+ L EA+ N+ N + CS C +
Sbjct: 5 KPLSDLSHELSLLPGIGPKLALRLAFFISQRGEEKNLSLIEALQNLKN-IKKCSQCNALS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPC IC D R+ ++ VV DV DLW +E +K+ + Y VL + PL+ I PE G+
Sbjct: 64 ETDPCEICSDPSRNNEILCVVSDVRDLWKIESTKSYSGRYFVLNSLIVPLEGIDPEKAGM 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK------GIDVKITRLAYGIPMGS 181
L I KK +E++ A ++EGQTT+ YI ++L G ++TRLA G+ MG
Sbjct: 124 TELFSLIRAKKPKEIVIAFDFSMEGQTTSLYIKERLSSQRDQLGYIPQLTRLAVGLSMGD 183
Query: 182 ELDYLDDGTIFEAIRSR 198
L D+ TI +AI R
Sbjct: 184 NLGNTDEFTISQAILHR 200
>gi|46143302|ref|ZP_00135500.2| COG0353: Recombinational DNA repair protein (RecF pathway)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207562|ref|YP_001052787.1| recombination protein RecR [Actinobacillus pleuropneumoniae L20]
gi|307249274|ref|ZP_07531269.1| hypothetical protein appser4_890 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307251596|ref|ZP_07533502.1| hypothetical protein appser6_1190 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256095|ref|ZP_07537882.1| hypothetical protein appser10_1000 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307260528|ref|ZP_07542221.1| hypothetical protein appser12_1020 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126096354|gb|ABN73182.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|306858673|gb|EFM90734.1| hypothetical protein appser4_890 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860907|gb|EFM92914.1| hypothetical protein appser6_1190 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865276|gb|EFM97172.1| hypothetical protein appser10_1000 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869757|gb|EFN01541.1| hypothetical protein appser12_1020 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 221
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 27 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEE 86
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +IG+
Sbjct: 87 DECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLD 146
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ +D
Sbjct: 147 LLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEMVDG 206
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 207 TTLSHSFAGR 216
>gi|238919042|ref|YP_002932556.1| recombination protein RecR, [Edwardsiella ictaluri 93-146]
gi|259563695|sp|C5BD00|RECR_EDWI9 RecName: Full=Recombination protein recR
gi|238868610|gb|ACR68321.1| recombination protein RecR, putative [Edwardsiella ictaluri 93-146]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRTFTEQ 66
Query: 70 DPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + ++R+ I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEVRLSQEAVSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|88857871|ref|ZP_01132513.1| recombination protein recR [Pseudoalteromonas tunicata D2]
gi|88819488|gb|EAR29301.1| recombination protein recR [Pseudoalteromonas tunicata D2]
Length = 202
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +PG GP+SA+R HL+++ L +A+ N KV C C
Sbjct: 7 LTQLISSLRCLPGIGPKSAQRIAFHLLERDRDGGRQLGQALTNAMAKVGHCQTCRTFCEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C +C + +R D+ ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++IG+
Sbjct: 67 PVCELCQNVKRIDSGLLCVVESPSDVLAIEQTGQYSGRYFVLMGHLSPLDGIGPKEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + I E+I A + T+EG+TTAH+I + + + +R+A+G+P+G ELD +D
Sbjct: 127 ELEVQFSQGHITEVILATNPTVEGETTAHFIAELCQKYHIAASRIAHGVPVGGELDLVDG 186
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 187 KTLAHAFNGR 196
>gi|146310613|ref|YP_001175687.1| recombination protein RecR [Enterobacter sp. 638]
gi|166918740|sp|A4W7F6|RECR_ENT38 RecName: Full=Recombination protein recR
gi|145317489|gb|ABP59636.1| DNA replication and repair protein RecR [Enterobacter sp. 638]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESETLTEVILATNPTVEGEATANYIGELCAQYGVSASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLAGRHKL 199
>gi|261493356|ref|ZP_05989882.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496622|ref|ZP_05993002.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307825|gb|EEY09148.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311000|gb|EEY12177.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + + C C
Sbjct: 7 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALSKALNEAMSHIGHCKSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R S + VVE D+ A+E++ + Y VL G LSP+D IGP +IG+
Sbjct: 67 EECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPIDGIGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P+G L+ +D
Sbjct: 127 LLQQRLEQESFHEVILATNPTIEGDATANYIAEMCRMYNVKATRIAHGVPVGGSLEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLSHSFAGR 196
>gi|77458035|ref|YP_347540.1| recombination protein RecR [Pseudomonas fluorescens Pf0-1]
gi|123605283|sp|Q3KFA5|RECR_PSEPF RecName: Full=Recombination protein recR
gi|77382038|gb|ABA73551.1| recombination protein [Pseudomonas fluorescens Pf0-1]
Length = 200
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C C +
Sbjct: 7 IRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRTLTED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 DLCPQCADTRRDDTLLCVVEGPMDVYAVEQT-GFRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE E+I A + T+EG+ TAHYI L+ + +R+A+G+P+G EL+ +D
Sbjct: 126 LMARIEEAGTFTEVILATNPTVEGEATAHYIAQLLQNKGLIASRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|291616584|ref|YP_003519326.1| RecR [Pantoea ananatis LMG 20103]
gi|291151614|gb|ADD76198.1| RecR [Pantoea ananatis LMG 20103]
gi|327393014|dbj|BAK10436.1| recombination protein RecR [Pantoea ananatis AJ13355]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPADIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + + E+I A + T+EG+ TA+YI + V +R+A+G+PMG EL+ +D
Sbjct: 127 RLEQRLENETLHEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPMGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|145299|gb|AAA23459.1| recR ORF [Escherichia coli]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R ++++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTVLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|293392501|ref|ZP_06636821.1| recombination protein R [Serratia odorifera DSM 4582]
gi|291424903|gb|EFE98112.1| recombination protein R [Serratia odorifera DSM 4582]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 DICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEQESISEVILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|120598525|ref|YP_963099.1| recombination protein RecR [Shewanella sp. W3-18-1]
gi|146293396|ref|YP_001183820.1| recombination protein RecR [Shewanella putrefaciens CN-32]
gi|166221965|sp|A4Y7T8|RECR_SHEPC RecName: Full=Recombination protein recR
gi|166221967|sp|A1RIQ0|RECR_SHESW RecName: Full=Recombination protein recR
gi|120558618|gb|ABM24545.1| DNA replication and repair protein RecR [Shewanella sp. W3-18-1]
gi|145565086|gb|ABP76021.1| recombination protein RecR [Shewanella putrefaciens CN-32]
gi|319426699|gb|ADV54773.1| recombination protein RecR [Shewanella putrefaciens 200]
Length = 199
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 7 LDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRTYTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE++G+
Sbjct: 67 TLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLASGDVSELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|332142046|ref|YP_004427784.1| recombination protein RecR [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552068|gb|AEA98786.1| recombination protein RecR [Alteromonas macleodii str. 'Deep
ecotype']
Length = 199
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG G +SA+R HL+++ L+ + N + C C
Sbjct: 7 LSELIQALTCLPGVGNKSAQRMAFHLLERNRTGAIDLSNVLHNAMEHIHHCKRCRTFTED 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+IG+
Sbjct: 67 ELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEEIGLT 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ I E+I A + T+EG+ TAHYI +V +R+A+G+P+G EL+Y+D
Sbjct: 127 ELEGRLSAGGINEVILATNPTVEGEATAHYIAQLCASHNVDASRIAHGVPVGGELEYIDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 NTLTHAFSGRRKL 199
>gi|269138378|ref|YP_003295078.1| recombination protein [Edwardsiella tarda EIB202]
gi|267984038|gb|ACY83867.1| recombination protein [Edwardsiella tarda EIB202]
gi|304558408|gb|ADM41072.1| Recombination protein RecR [Edwardsiella tarda FL6-60]
Length = 201
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRTFTEQ 66
Query: 70 DPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + ++R+ I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEARLGQETLSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|110640733|ref|YP_668461.1| recombination protein RecR [Escherichia coli 536]
gi|123344293|sp|Q0TKG9|RECR_ECOL5 RecName: Full=Recombination protein recR
gi|110342325|gb|ABG68562.1| recombination protein RecR [Escherichia coli 536]
Length = 201
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+ + +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQTLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRKENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|270263613|ref|ZP_06191882.1| recombination protein RecR [Serratia odorifera 4Rx13]
gi|270042497|gb|EFA15592.1| recombination protein RecR [Serratia odorifera 4Rx13]
Length = 201
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 DICTICANPRRLQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEKESITEVILATNPTVEGDATANYIAEMCGQYGVVASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R V+
Sbjct: 187 TTLSHSLAGRNVI 199
>gi|226329025|ref|ZP_03804543.1| hypothetical protein PROPEN_02927 [Proteus penneri ATCC 35198]
gi|225202211|gb|EEG84565.1| hypothetical protein PROPEN_02927 [Proteus penneri ATCC 35198]
Length = 202
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCCDCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 ERCTICANVRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG+ TA+YI + D+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSQETISEVILATNPTVEGEATANYIAEICAQYDIAASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ +I R
Sbjct: 187 TTLSHSIAGR 196
>gi|304395536|ref|ZP_07377419.1| recombination protein RecR [Pantoea sp. aB]
gi|304356830|gb|EFM21194.1| recombination protein RecR [Pantoea sp. aB]
Length = 201
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|260596871|ref|YP_003209442.1| recombination protein RecR [Cronobacter turicensis z3032]
gi|260216048|emb|CBA28761.1| Recombination protein recR [Cronobacter turicensis z3032]
Length = 201
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EKCNICTNPRRQENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEAEPLKEIILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|126174785|ref|YP_001050934.1| recombination protein RecR [Shewanella baltica OS155]
gi|166221962|sp|A3D5Q2|RECR_SHEB5 RecName: Full=Recombination protein recR
gi|125997990|gb|ABN62065.1| recombination protein RecR [Shewanella baltica OS155]
Length = 199
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 7 LDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRTYTEE 66
Query: 70 DPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE++G+
Sbjct: 67 TLCPICTSHKRGTSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|262165294|ref|ZP_06033031.1| recombination protein RecR [Vibrio mimicus VM223]
gi|262025010|gb|EEY43678.1| recombination protein RecR [Vibrio mimicus VM223]
Length = 190
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQDVCH 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ +L
Sbjct: 61 ICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLDY 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLLGRHKL 189
>gi|152969027|ref|YP_001334136.1| recombination protein RecR [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238893442|ref|YP_002918176.1| recombination protein RecR [Klebsiella pneumoniae NTUH-K2044]
gi|262041605|ref|ZP_06014800.1| recombination protein RecR [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330002984|ref|ZP_08304509.1| recombination protein RecR [Klebsiella sp. MS 92-3]
gi|166221945|sp|A6T5N5|RECR_KLEP7 RecName: Full=Recombination protein recR
gi|150953876|gb|ABR75906.1| recombination protein RecR [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238545758|dbj|BAH62109.1| recombination protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041031|gb|EEW42107.1| recombination protein RecR [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537095|gb|EGF63374.1| recombination protein RecR [Klebsiella sp. MS 92-3]
Length = 201
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQYSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|330953815|gb|EGH54075.1| recombination protein RecR [Pseudomonas syringae Cit 7]
Length = 200
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA+A+ + V C C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADTRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|239993308|ref|ZP_04713832.1| recombination protein RecR [Alteromonas macleodii ATCC 27126]
Length = 199
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG G +SA+R HL+++ L+ + N + C C
Sbjct: 7 LSELIQALTCLPGVGNKSAQRMAFHLLERNRTGAIDLSNVLHNAMEHIHHCKRCRTFTED 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+IG+
Sbjct: 67 ELCDICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEEIGLT 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ I E+I A + T+EG+ TAHYI +V +R+A+G+P+G EL+Y+D
Sbjct: 127 ELEARLAAGGINEVILATNPTVEGEATAHYIAQLCASHNVDASRIAHGVPVGGELEYIDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 NTLTHAFSGRRKL 199
>gi|327483767|gb|AEA78174.1| Recombination protein RecR [Vibrio cholerae LMA3894-4]
Length = 190
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRTFTEQDVCH 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ +L
Sbjct: 61 ICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLDY 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLLGRHKL 189
>gi|311280616|ref|YP_003942847.1| recombination protein RecR [Enterobacter cloacae SCF1]
gi|308749811|gb|ADO49563.1| recombination protein RecR [Enterobacter cloacae SCF1]
Length = 201
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + + E+I A + T+EG+ TA+YI + + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAAETLSEVILATNPTVEGEATANYIAELCEQYGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|290474635|ref|YP_003467515.1| gap repair protein [Xenorhabdus bovienii SS-2004]
gi|289173948|emb|CBJ80735.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Xenorhabdus bovienii SS-2004]
Length = 202
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 7 LESLMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCQDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 EQCTICGNPRRQQNGQICVVETPADIHAIEQTGQFAGRYFVLMGRLSPLDGIGPMDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEERLSSETLSEIILATNPTVEGEATANYIAEMCSQYGVIASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|157369380|ref|YP_001477369.1| recombination protein RecR [Serratia proteamaculans 568]
gi|166918742|sp|A8GAV1|RECR_SERP5 RecName: Full=Recombination protein recR
gi|157321144|gb|ABV40241.1| recombination protein RecR [Serratia proteamaculans 568]
Length = 201
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 112/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 DICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + + E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEKESVTEVILATNPTVEGDATANYIAEMCGQYGVVASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R V+
Sbjct: 187 TTLSHSLAGRHVI 199
>gi|161504339|ref|YP_001571451.1| recombination protein RecR [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189029371|sp|A9MLY7|RECR_SALAR RecName: Full=Recombination protein recR
gi|160865686|gb|ABX22309.1| hypothetical protein SARI_02448 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 201
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ ++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMAEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICANPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLVSEKISELILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|153001130|ref|YP_001366811.1| recombination protein RecR [Shewanella baltica OS185]
gi|160875800|ref|YP_001555116.1| recombination protein RecR [Shewanella baltica OS195]
gi|217972948|ref|YP_002357699.1| recombination protein RecR [Shewanella baltica OS223]
gi|304409213|ref|ZP_07390834.1| recombination protein RecR [Shewanella baltica OS183]
gi|307303216|ref|ZP_07582971.1| recombination protein RecR [Shewanella baltica BA175]
gi|166221963|sp|A6WPK9|RECR_SHEB8 RecName: Full=Recombination protein recR
gi|189029373|sp|A9L594|RECR_SHEB9 RecName: Full=Recombination protein recR
gi|254790782|sp|B8E703|RECR_SHEB2 RecName: Full=Recombination protein recR
gi|151365748|gb|ABS08748.1| recombination protein RecR [Shewanella baltica OS185]
gi|160861322|gb|ABX49856.1| recombination protein RecR [Shewanella baltica OS195]
gi|217498083|gb|ACK46276.1| recombination protein RecR [Shewanella baltica OS223]
gi|304353034|gb|EFM17431.1| recombination protein RecR [Shewanella baltica OS183]
gi|306913576|gb|EFN43998.1| recombination protein RecR [Shewanella baltica BA175]
gi|315267990|gb|ADT94843.1| recombination protein RecR [Shewanella baltica OS678]
Length = 199
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 7 LDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRTYTEE 66
Query: 70 DPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE++G+
Sbjct: 67 TLCPICASHKRGTSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|113970587|ref|YP_734380.1| recombination protein RecR [Shewanella sp. MR-4]
gi|114047818|ref|YP_738368.1| recombination protein RecR [Shewanella sp. MR-7]
gi|123130341|sp|Q0HHZ4|RECR_SHESM RecName: Full=Recombination protein recR
gi|123326453|sp|Q0HU94|RECR_SHESR RecName: Full=Recombination protein recR
gi|113885271|gb|ABI39323.1| DNA replication and repair protein RecR [Shewanella sp. MR-4]
gi|113889260|gb|ABI43311.1| DNA replication and repair protein RecR [Shewanella sp. MR-7]
Length = 199
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C
Sbjct: 7 LDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDIGHCQSCRTYTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +S I VVE AD+ A+E + Y VL G LSPLD +GPE++G+
Sbjct: 67 SLCPICASHKRGSSSTICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVVISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRIPL 199
>gi|66046625|ref|YP_236466.1| recombination protein RecR [Pseudomonas syringae pv. syringae
B728a]
gi|302188651|ref|ZP_07265324.1| recombination protein RecR [Pseudomonas syringae pv. syringae 642]
gi|75501355|sp|Q4ZQZ4|RECR_PSEU2 RecName: Full=Recombination protein recR
gi|63257332|gb|AAY38428.1| RecR protein [Pseudomonas syringae pv. syringae B728a]
gi|330972503|gb|EGH72569.1| recombination protein RecR [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 200
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA+A+ + V C C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|332535327|ref|ZP_08411126.1| recombination protein RecR [Pseudoalteromonas haloplanktis ANT/505]
gi|332035240|gb|EGI71747.1| recombination protein RecR [Pseudoalteromonas haloplanktis ANT/505]
Length = 202
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L PG GP+SA+R HL+++ + L A+ + C C
Sbjct: 7 LNQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAIGHCQSCRTFCEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+ +R D+ ++ VVE D+ A+E++ LY VL G LSP+D IGP++IG+
Sbjct: 67 AQCDICLSTKRQDSGILCVVESPTDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +++ I E+I A + T+EG TTAHYI V +R+A+GIP+G ELD +D
Sbjct: 127 VLEQKLAQGDINEVILATNPTVEGDTTAHYIAQLCHKYKVGASRIAHGIPVGGELDLVDG 186
Query: 189 GTIFEAIRSR 198
T+ A R
Sbjct: 187 RTLMHAFSGR 196
>gi|157146901|ref|YP_001454220.1| recombination protein RecR [Citrobacter koseri ATCC BAA-895]
gi|166221931|sp|A8AJX1|RECR_CITK8 RecName: Full=Recombination protein recR
gi|157084106|gb|ABV13784.1| hypothetical protein CKO_02677 [Citrobacter koseri ATCC BAA-895]
Length = 201
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 DVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +++ E+I A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLASEQLSEVILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|170767663|ref|ZP_02902116.1| recombination protein RecR [Escherichia albertii TW07627]
gi|218703755|ref|YP_002411274.1| recombination protein RecR [Escherichia coli UMN026]
gi|293403593|ref|ZP_06647684.1| recombination protein recR [Escherichia coli FVEC1412]
gi|298379203|ref|ZP_06989084.1| recombination protein recR [Escherichia coli FVEC1302]
gi|300900546|ref|ZP_07118713.1| recombination protein RecR [Escherichia coli MS 198-1]
gi|226739002|sp|B7N925|RECR_ECOLU RecName: Full=Recombination protein recR
gi|170123151|gb|EDS92082.1| recombination protein RecR [Escherichia albertii TW07627]
gi|218430852|emb|CAR11726.1| gap repair protein [Escherichia coli UMN026]
gi|291429446|gb|EFF02466.1| recombination protein recR [Escherichia coli FVEC1412]
gi|298280316|gb|EFI21820.1| recombination protein recR [Escherichia coli FVEC1302]
gi|300356027|gb|EFJ71897.1| recombination protein RecR [Escherichia coli MS 198-1]
Length = 201
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|297621416|ref|YP_003709553.1| Recombination protein recR [Waddlia chondrophila WSU 86-1044]
gi|297376717|gb|ADI38547.1| Recombination protein recR [Waddlia chondrophila WSU 86-1044]
Length = 204
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 111/194 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI+ L R+PG G +SA R +++ + L A+ ++ + K+ C CG +
Sbjct: 11 KHLLQLIEALKRLPGVGNKSAERFAFQMLEWTPKHLKLTADLISQLPEKLKHCEECGCLI 70
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ CA C ++ + ++ V+ D++A+E + +Y VLG +SPL+ GPE + +
Sbjct: 71 GDEQCAFCQPKRMEQEMMCVIASPKDVYAIEETHQFKGVYQVLGFLISPLEGKGPERLPL 130
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L ERI IRE++ A+ +T+EG T+ Y+ +L+ + V ++RLA G+PMGS LDY+D
Sbjct: 131 EKLNERIRRLGIREVVIALDSTLEGDATSLYLKRELEPLKVNVSRLALGLPMGSSLDYVD 190
Query: 188 DGTIFEAIRSRTVL 201
GT+ A R
Sbjct: 191 GGTLARAFSGRAAF 204
>gi|330899494|gb|EGH30913.1| recombination protein RecR [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 200
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA+A+ + V C C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER+ + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|325111243|ref|YP_004272311.1| DNA replication and repair protein RecR [Planctomyces brasiliensis
DSM 5305]
gi|324971511|gb|ADY62289.1| DNA replication and repair protein RecR [Planctomyces brasiliensis
DSM 5305]
Length = 203
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 110/197 (55%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
Q G + L+ A +PG G +SA R ++V K+ L +A+ + + C
Sbjct: 4 QSHPYGPSVARLVDEFAEMPGIGRKSAERLAQYVVNLKKPAAARLIQAIDAVKRSIRRCD 63
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+C + + C IC D +R++S++ VVE D+ +LE S YHVL G LSPL+ IG
Sbjct: 64 VCHTLTEAETCEICSDPRRESSLVCVVEQPRDVISLEASGVFQGKYHVLHGCLSPLNGIG 123
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PE + + SL++R+ + E++ A + T+EG TA +I + L +V+ITRLA GI GS
Sbjct: 124 PEQLTLDSLVKRVREHGVTEIVMATNPTLEGDGTALFISNLLADDNVRITRLARGIASGS 183
Query: 182 ELDYLDDGTIFEAIRSR 198
L++ + + +A+R R
Sbjct: 184 VLEFANKEMLADALRGR 200
>gi|251790617|ref|YP_003005338.1| recombination protein RecR [Dickeya zeae Ech1591]
gi|247539238|gb|ACT07859.1| recombination protein RecR [Dickeya zeae Ech1591]
Length = 201
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L+ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMDALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEVCSICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLVTETISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|114565608|ref|YP_752762.1| recombination protein RecR [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122319210|sp|Q0B0W3|RECR_SYNWW RecName: Full=Recombination protein recR
gi|114336543|gb|ABI67391.1| DNA replication and repair protein RecR [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 197
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 117/195 (60%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +ENLI L ++PG GP++A+R L+++K E LA+A+ + KV CS CG +
Sbjct: 4 ARPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRCGYL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC IC D+ RD S+I + E+ +D+ A+ER+ Y VL + ++ G ED+
Sbjct: 64 TDFDPCLICSDESRDKSLICIGEESSDVIAIERT-GFRGQYFVLNKDFNLMEDKGLEDLN 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L +R+ +I+E++ A++ ++G+ + ++ VK+TRLA+G+P+G ++++
Sbjct: 123 LKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGDIEFA 182
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ R L
Sbjct: 183 DEITLRRALEGRKEL 197
>gi|242238467|ref|YP_002986648.1| recombination protein RecR [Dickeya dadantii Ech703]
gi|242130524|gb|ACS84826.1| recombination protein RecR [Dickeya dadantii Ech703]
Length = 201
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L+ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMDALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEARLATESISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|149189265|ref|ZP_01867551.1| recombination protein RecR [Vibrio shilonii AK1]
gi|148836824|gb|EDL53775.1| recombination protein RecR [Vibrio shilonii AK1]
Length = 199
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LA+A+++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLADALSSAMTEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICSNPKRKENGQLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRQGDIGEVILATNPTVEGEATAHYIAELCHEHKVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGR 196
>gi|104780941|ref|YP_607439.1| recombination protein RecR [Pseudomonas entomophila L48]
gi|122403933|sp|Q1ICI0|RECR_PSEE4 RecName: Full=Recombination protein recR
gi|95109928|emb|CAK14633.1| recombination protein recR [Pseudomonas entomophila L48]
Length = 200
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C C +
Sbjct: 7 IRQLIDALRILPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTQLCVVEGPVDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + TR+A+G+P+G EL+ +D
Sbjct: 126 LMARIEEQGTFSEVILATNPTVEGEATAHYIAQLLAEKGLTATRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ A R
Sbjct: 186 GTLAHAFAGR 195
>gi|320538820|ref|ZP_08038496.1| gap repair protein [Serratia symbiotica str. Tucson]
gi|320030980|gb|EFW12983.1| gap repair protein [Serratia symbiotica str. Tucson]
Length = 202
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LELLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 DICTICANPRRQKNGQICVVETPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E ++I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLGQRLEKERITEIILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|117920887|ref|YP_870079.1| recombination protein RecR [Shewanella sp. ANA-3]
gi|166221966|sp|A0KY04|RECR_SHESA RecName: Full=Recombination protein recR
gi|117613219|gb|ABK48673.1| DNA replication and repair protein RecR [Shewanella sp. ANA-3]
Length = 199
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C
Sbjct: 7 LDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDIGHCQSCRTYTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE++G+
Sbjct: 67 SLCPICSSHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVVISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRIPL 199
>gi|229591980|ref|YP_002874099.1| recombination protein RecR [Pseudomonas fluorescens SBW25]
gi|259563703|sp|C3JXP7|RECR_PSEFS RecName: Full=Recombination protein recR
gi|229363846|emb|CAY51305.1| recombination protein [Pseudomonas fluorescens SBW25]
Length = 200
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C C +
Sbjct: 7 IRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMTGVGHCRQCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTLLCVVEGPMDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 126 LVARIEEQGTFTEVILATNPTVEGEATAHYIAQLLTNKGLITSRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|312962438|ref|ZP_07776929.1| Recombination protein recR [Pseudomonas fluorescens WH6]
gi|311283365|gb|EFQ61955.1| Recombination protein recR [Pseudomonas fluorescens WH6]
Length = 206
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C C +
Sbjct: 13 IRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRTLTEE 72
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 73 ELCPQCADPRRDDTLLCVVEGPMDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 131
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 132 LVARIEEQGTFSEVILATNPTVEGEATAHYIAQLLSNKGLITSRIAHGVPLGGELELVDG 191
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 192 GTLAHSFAGR 201
>gi|24373578|ref|NP_717621.1| recombination protein RecR [Shewanella oneidensis MR-1]
gi|38372488|sp|Q8EFF8|RECR_SHEON RecName: Full=Recombination protein recR
gi|24347900|gb|AAN55065.1|AE015643_12 recombination protein RecR [Shewanella oneidensis MR-1]
Length = 199
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C
Sbjct: 7 LDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLAAALSSAMSDIGHCQSCRTYTEE 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE++G+
Sbjct: 67 TLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLA 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 LLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVLISRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRIPL 199
>gi|167034827|ref|YP_001670058.1| recombination protein RecR [Pseudomonas putida GB-1]
gi|189029368|sp|B0KPW7|RECR_PSEPG RecName: Full=Recombination protein recR
gi|166861315|gb|ABY99722.1| recombination protein RecR [Pseudomonas putida GB-1]
Length = 200
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADTRRDDTQLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + TR+A+G+P+G EL+ +D
Sbjct: 126 LMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLAATRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ AI R
Sbjct: 186 GTLAHAIAGR 195
>gi|82542965|ref|YP_406912.1| recombination protein RecR [Shigella boydii Sb227]
gi|82775797|ref|YP_402144.1| recombination protein RecR [Shigella dysenteriae Sd197]
gi|309786055|ref|ZP_07680684.1| recombination protein RecR [Shigella dysenteriae 1617]
gi|123560410|sp|Q325C4|RECR_SHIBS RecName: Full=Recombination protein recR
gi|123563329|sp|Q32J52|RECR_SHIDS RecName: Full=Recombination protein recR
gi|81239945|gb|ABB60655.1| recombination and repair protein [Shigella dysenteriae Sd197]
gi|81244376|gb|ABB65084.1| recombination and repair [Shigella boydii Sb227]
gi|308926166|gb|EFP71644.1| recombination protein RecR [Shigella dysenteriae 1617]
gi|320184088|gb|EFW58907.1| Recombination protein RecR [Shigella flexneri CDC 796-83]
gi|332098534|gb|EGJ03500.1| recombination protein RecR [Shigella boydii 3594-74]
Length = 201
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L + G GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|152983854|ref|YP_001349153.1| recombination protein RecR [Pseudomonas aeruginosa PA7]
gi|166221954|sp|A6V7W8|RECR_PSEA7 RecName: Full=Recombination protein recR
gi|150959012|gb|ABR81037.1| recombination protein RecR [Pseudomonas aeruginosa PA7]
Length = 198
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDSLLCVVEGPLDVFAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPE 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L RI E+I A + T+EG+ TAHYI L + ++R+A+G+P+G EL+ +D G
Sbjct: 126 LDARIRDGAFSEVILATNPTVEGEATAHYIAQLLADRGLTLSRIAHGVPLGGELELVDGG 185
Query: 190 TIFEAIRSR 198
T+ A+ R
Sbjct: 186 TLAHALAGR 194
>gi|206577691|ref|YP_002240026.1| recombination protein RecR [Klebsiella pneumoniae 342]
gi|288936779|ref|YP_003440838.1| recombination protein RecR [Klebsiella variicola At-22]
gi|290510166|ref|ZP_06549536.1| recombination protein RecR [Klebsiella sp. 1_1_55]
gi|226726305|sp|B5Y0N5|RECR_KLEP3 RecName: Full=Recombination protein recR
gi|206566749|gb|ACI08525.1| recombination protein RecR [Klebsiella pneumoniae 342]
gi|288891488|gb|ADC59806.1| recombination protein RecR [Klebsiella variicola At-22]
gi|289776882|gb|EFD84880.1| recombination protein RecR [Klebsiella sp. 1_1_55]
Length = 201
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|269792613|ref|YP_003317517.1| recombination protein RecR [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100248|gb|ACZ19235.1| recombination protein RecR [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 200
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 6/192 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L R+PG G + ARR ++ + + + L+ A+ V CS+CG +
Sbjct: 9 VDGLIEKLKRLPGVGEKGARRFAFFILGQPKDWVEDLSRAIREARWSVRPCSVCGGLAEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI---G 126
D C IC D RD VI VVE D A+ER + N YHVLGG SPLD EDI
Sbjct: 69 DLCPICSDPARDREVICVVESQEDCVAMERHRIFNGRYHVLGGRYSPLDG---EDIPSEA 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ SL +R+E ++E+I A++ ++EG+ TA + + L + VK++RL+ G+P+G + +
Sbjct: 126 LASLRDRVERGGVQEVILALAPSVEGELTALAVKEALDDLPVKVSRLSSGLPVGGSIGFA 185
Query: 187 DDGTIFEAIRSR 198
D T+ A+ R
Sbjct: 186 DSATLKLALEGR 197
>gi|213968920|ref|ZP_03397060.1| recombination protein RecR [Pseudomonas syringae pv. tomato T1]
gi|301385358|ref|ZP_07233776.1| recombination protein RecR [Pseudomonas syringae pv. tomato Max13]
gi|302061232|ref|ZP_07252773.1| recombination protein RecR [Pseudomonas syringae pv. tomato K40]
gi|302133131|ref|ZP_07259121.1| recombination protein RecR [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213926219|gb|EEB59774.1| recombination protein RecR [Pseudomonas syringae pv. tomato T1]
gi|330879118|gb|EGH13267.1| recombination protein RecR [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330967861|gb|EGH68121.1| recombination protein RecR [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|331015906|gb|EGH95962.1| recombination protein RecR [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 200
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA A+ + V C +C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRLCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCSDLRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERISQQATFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|238788051|ref|ZP_04631847.1| hypothetical protein yfred0001_15420 [Yersinia frederiksenii ATCC
33641]
gi|238723999|gb|EEQ15643.1| hypothetical protein yfred0001_15420 [Yersinia frederiksenii ATCC
33641]
Length = 201
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+
Sbjct: 67 DRCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 LLEKRLETETISEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRT 199
T+ ++ R
Sbjct: 187 TTLSHSLAGRN 197
>gi|156934944|ref|YP_001438860.1| recombination protein RecR [Cronobacter sakazakii ATCC BAA-894]
gi|166221938|sp|A7MJW5|RECR_ENTS8 RecName: Full=Recombination protein recR
gi|156533198|gb|ABU78024.1| hypothetical protein ESA_02794 [Cronobacter sakazakii ATCC BAA-894]
Length = 201
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EKCNICTNPRRQENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLAAEPLKEIILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|312882072|ref|ZP_07741822.1| recombination protein RecR [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370208|gb|EFP97710.1| recombination protein RecR [Vibrio caribbenthicus ATCC BAA-2122]
Length = 189
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C + C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCSECRTFTEQEICH 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ L
Sbjct: 61 ICTNPKRQENGQICVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDVLDY 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + E+I A + T+EG+ TAHYI + + V+ +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLRRGDVSEVILATNPTVEGEATAHYIAELCREHSVEASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSR 198
++ R
Sbjct: 181 HSLLGR 186
>gi|70729289|ref|YP_259026.1| recombination protein RecR [Pseudomonas fluorescens Pf-5]
gi|123656866|sp|Q4KFF7|RECR_PSEF5 RecName: Full=Recombination protein recR
gi|68343588|gb|AAY91194.1| recombination protein RecR [Pseudomonas fluorescens Pf-5]
Length = 200
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C C +
Sbjct: 7 IRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGLRLAQALSQAMEGVGHCRQCRTLTED 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTLLCVVEGPMDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 126 LLARIEEQGSFSEVILATNPTVEGEATAHYIAQLLTNKGLITSRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|283784299|ref|YP_003364164.1| recombination protein [Citrobacter rodentium ICC168]
gi|282947753|emb|CBG87309.1| recombination protein [Citrobacter rodentium ICC168]
Length = 201
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ +D
Sbjct: 127 RLEQRLSAEPLNEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLAGRHKL 199
>gi|71734841|ref|YP_275477.1| recombination protein RecR [Pseudomonas syringae pv. phaseolicola
1448A]
gi|289626816|ref|ZP_06459770.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646517|ref|ZP_06477860.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str.
2250]
gi|298487770|ref|ZP_07005811.1| Recombination protein RecR [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|123635795|sp|Q48GK6|RECR_PSE14 RecName: Full=Recombination protein recR
gi|71555394|gb|AAZ34605.1| recombination protein RecR [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298157862|gb|EFH98941.1| Recombination protein RecR [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320323988|gb|EFW80072.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str.
B076]
gi|320328124|gb|EFW84129.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330869031|gb|EGH03740.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330986555|gb|EGH84658.1| recombination protein RecR [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 200
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA A+ + V C C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|238762942|ref|ZP_04623910.1| hypothetical protein ykris0001_32540 [Yersinia kristensenii ATCC
33638]
gi|238698953|gb|EEP91702.1| hypothetical protein ykris0001_32540 [Yersinia kristensenii ATCC
33638]
Length = 201
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 DHCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 LLEKRLETETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRT 199
T+ ++ R
Sbjct: 187 TTLSHSLAGRN 197
>gi|323697996|ref|ZP_08109908.1| recombination protein RecR [Desulfovibrio sp. ND132]
gi|323457928|gb|EGB13793.1| recombination protein RecR [Desulfovibrio desulfuricans ND132]
Length = 201
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ ++ L+ +PG GP+SA R L L+K + + +++ ++ ++CLC C + +
Sbjct: 8 LKEVVDQLSSLPGIGPKSALRIALTLLKMPRERAAGVGQSILDLRERLCLCEDCACLAES 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PCAIC D RD + +V + L ALE Y VLGG LSPLD + P + I+
Sbjct: 68 SPCAICADATRDTGQLCLVPEWDALLALEEMGVYRGKYLVLGGLLSPLDGVDPGQLEIER 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDYLD 187
L R+ ELI A+ AT++ ++TA Y+ + ++ V +TRLA GIPMG+E+ Y+D
Sbjct: 128 LRRRLASGDFSELILALGATLDAESTASYVKNLVESEFPGVSVTRLAQGIPMGAEVKYMD 187
Query: 188 DGTIFEAIRSR 198
T+ +++ R
Sbjct: 188 KETLKQSLVHR 198
>gi|240948279|ref|ZP_04752665.1| recombination protein RecR [Actinobacillus minor NM305]
gi|257465542|ref|ZP_05629913.1| recombination protein RecR [Actinobacillus minor 202]
gi|240297318|gb|EER47859.1| recombination protein RecR [Actinobacillus minor NM305]
gi|257451202|gb|EEV25245.1| recombination protein RecR [Actinobacillus minor 202]
Length = 201
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 7 LENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALNEAMTHIGHCQSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R S + VVE D+ A+E++ + Y VL G LSP+D +GP +IG+
Sbjct: 67 EECNICRNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPIDGVGPREIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P+G L+ +D
Sbjct: 127 LLQQRLENESFHEVILATNPTIEGDATANYIAEICRIYNVKATRIAHGVPVGGSLETVDG 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLSHSFAGR 196
>gi|237799334|ref|ZP_04587795.1| recombination protein RecR [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022190|gb|EGI02247.1| recombination protein RecR [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 200
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA A+ + V C C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 EFCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERIAGQGTFTEVILATNPTVEGEATAHYIAQLLNDKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|238791474|ref|ZP_04635112.1| hypothetical protein yinte0001_26260 [Yersinia intermedia ATCC
29909]
gi|238729090|gb|EEQ20606.1| hypothetical protein yinte0001_26260 [Yersinia intermedia ATCC
29909]
Length = 201
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 DRCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 LLEKRLETETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRT 199
T+ ++ R
Sbjct: 187 TTLSHSLAGRN 197
>gi|226939893|ref|YP_002794966.1| recombination protein RecR [Laribacter hongkongensis HLHK9]
gi|254790772|sp|C1D5E0|RECR_LARHH RecName: Full=Recombination protein recR
gi|226714819|gb|ACO73957.1| RecR [Laribacter hongkongensis HLHK9]
Length = 203
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+LI L +PG GP++A+R HL+++ LA A+ + + + C+ C
Sbjct: 3 TPASLESLITALRVLPGVGPKTAQRMAYHLMQRDPGGADRLARAIDHARSHLKHCARCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T+ C +C D QR V+ VVE AD +E++ + + LY VL G +SPLD + DI
Sbjct: 63 FSETELCVLCADDQRRQDVLCVVEMPADALMIEQTHSYDGLYFVLMGKVSPLDGLTARDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L R + E+I A + T EG+ TAH + K + ++R+A G+P+G EL++
Sbjct: 123 PLEQLARRALDGTVNEVILATNFTAEGEATAHVLATLFKDRGLSVSRIARGLPVGGELEH 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ +A+ R L
Sbjct: 183 VDAGTLAQALYERRRL 198
>gi|238759222|ref|ZP_04620389.1| hypothetical protein yaldo0001_7680 [Yersinia aldovae ATCC 35236]
gi|238702509|gb|EEP95059.1| hypothetical protein yaldo0001_7680 [Yersinia aldovae ATCC 35236]
Length = 201
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTQAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + I VVE AD+ A+E++ + Y VL G LSP+D IGP DIG+
Sbjct: 67 DRCTICSNPRRQQNGQICVVESPADIHAVEQTGQFSGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ER+ + I E+I A + T+EG TA+YI +R+A+G+P+G EL+ +D
Sbjct: 127 LLEERLSTETITEVILATNPTVEGDATANYIGQMCGQYGALASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|238899121|ref|YP_002924803.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259563699|sp|C4K7W2|RECR_HAMD5 RecName: Full=Recombination protein recR
gi|229466881|gb|ACQ68655.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 202
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE L++ L +PG GP+SA+R +L++ LAE++ +++ C +C
Sbjct: 7 IEALMESLRHLPGVGPKSAQRMAFYLLQSDRSKGIRLAESLLKAMSEIGHCGVCRTFTEQ 66
Query: 70 DPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + R+ I VVE +D+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 PCCDICSNVYREKMGQICVVESPSDICAIEQTGQFSGRYFVLMGRLSPLDGIGPDDIGLP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ + I+E+I A++ T+EG+ T++YI + + T++A+G+P+G +L+ +D+
Sbjct: 127 LLEHRLSTEPIKEVILAMNPTVEGEATSNYIAQMCEEYGISTTKIAHGVPIGGDLEMVDE 186
Query: 189 GTIFEAIRSR 198
T+ A+ R
Sbjct: 187 TTLSHALVGR 196
>gi|325274400|ref|ZP_08140489.1| recombination protein RecR [Pseudomonas sp. TJI-51]
gi|324100472|gb|EGB98229.1| recombination protein RecR [Pseudomonas sp. TJI-51]
Length = 200
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
D C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 DLCPQCADPRRDDTQLCVVEGPTDVYAVEQA-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 126 LMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLNEKGLVASRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ A R
Sbjct: 186 GTLAHAFAGR 195
>gi|28870795|ref|NP_793414.1| recombination protein RecR [Pseudomonas syringae pv. tomato str.
DC3000]
gi|37999576|sp|Q87Z00|RECR_PSESM RecName: Full=Recombination protein recR
gi|28854044|gb|AAO57109.1| recombination protein RecR [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 200
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA A+ + V C +C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRLCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +R+ +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCSDLRRNDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D
Sbjct: 126 LMERISQQATFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|238754275|ref|ZP_04615632.1| hypothetical protein yruck0001_22240 [Yersinia ruckeri ATCC 29473]
gi|238707522|gb|EEP99882.1| hypothetical protein yruck0001_22240 [Yersinia ruckeri ATCC 29473]
Length = 191
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GP+SA+R HL+++ LA+A+ +++ C+ C D C IC + +
Sbjct: 7 LPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQDSCTICANPR 66
Query: 80 RDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK 138
R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+ L +R+ +
Sbjct: 67 RQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLDRLEQRLSSET 126
Query: 139 IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D T+ ++ R
Sbjct: 127 LSEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDGTTLSHSLAGR 186
>gi|119774449|ref|YP_927189.1| recombination protein RecR [Shewanella amazonensis SB2B]
gi|166221961|sp|A1S563|RECR_SHEAM RecName: Full=Recombination protein recR
gi|119766949|gb|ABL99519.1| recombination protein RecR [Shewanella amazonensis SB2B]
Length = 199
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L++ + LA+ ++ + V C C
Sbjct: 7 VDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKCRTFTEQ 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R +A + VVE AD+ A+E Y VL G LSPLD IGPE++G+
Sbjct: 67 SLCPICSSSRRGEADTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGPEELGLS 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ++ I ELI A + T+EG TAHYI D + V ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEGQLVGGGISELILATNPTVEGDATAHYIADIARRAGVAVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSRTVL 201
T+ + R L
Sbjct: 187 TTLALSFNGRLPL 199
>gi|123443299|ref|YP_001007273.1| recombination protein RecR [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332160793|ref|YP_004297370.1| recombination protein RecR [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166223510|sp|A1JNB5|RECR_YERE8 RecName: Full=Recombination protein recR
gi|122090260|emb|CAL13126.1| recombination protein RecR [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318604679|emb|CBY26177.1| recombination protein RecR [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665023|gb|ADZ41667.1| recombination protein RecR [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863112|emb|CBX73242.1| recombination protein recR [Yersinia enterocolitica W22703]
Length = 201
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 EHCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 LLEKRLETETISEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRT 199
T+ ++ R
Sbjct: 187 TTLSHSLAGRN 197
>gi|258626251|ref|ZP_05721098.1| recombination protein RecR [Vibrio mimicus VM603]
gi|258581303|gb|EEW06205.1| recombination protein RecR [Vibrio mimicus VM603]
Length = 180
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G
Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVG 178
>gi|261365093|ref|ZP_05977976.1| recombination protein RecR [Neisseria mucosa ATCC 25996]
gi|288566519|gb|EFC88079.1| recombination protein RecR [Neisseria mucosa ATCC 25996]
Length = 206
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 105/189 (55%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P GP+SA+R L++ K Q L EA+ ++ C +C N +D C
Sbjct: 11 LINALKVLPNVGPKSAQRMAHQLLQHKRQEAENLVEALQYALLQIQHCRMCNNFCESDLC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D RD +++V AD+ +E + + LY VL G +SP + I + L+
Sbjct: 71 EICSDANRDPRRLMIVHMPADVSNMETANCHDGLYFVLMGQVSPAQGMDISHISLDKLVA 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ ++ E+I A + T EG TA+ + + K + K++RLA GIP+G EL+Y+D GT+
Sbjct: 131 RLQNSEVEEIIIATNFTAEGDATAYVLAELFKPLPYKVSRLARGIPLGGELEYVDAGTLA 190
Query: 193 EAIRSRTVL 201
+A+ R +L
Sbjct: 191 QAVYERRML 199
>gi|71278497|ref|YP_270358.1| recombination protein RecR [Colwellia psychrerythraea 34H]
gi|123631494|sp|Q47XW2|RECR_COLP3 RecName: Full=Recombination protein recR
gi|71144237|gb|AAZ24710.1| recombination protein RecR [Colwellia psychrerythraea 34H]
Length = 201
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L +PG G +SA+R L+++ + LA +A + C C N
Sbjct: 7 VQELIDSLKCLPGVGAKSAQRMAFQLLERNRRGGSKLANTLAKAMTDIGHCQQCRNFTEE 66
Query: 70 DPCAICIDQQRDASVII-VVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R S + +VE D+ A+E++ Y VL G LSP+D IGP+D+G+
Sbjct: 67 ALCEICQSPKRQLSTTLCIVETPGDVIAIEQTGEFFGKYFVLMGHLSPIDGIGPDDLGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ++ + E+I A + T+EG+ TAH+I + + V I+R+A+G+P+G EL+Y+D
Sbjct: 127 ILAKQFATGQFSEVILATNPTVEGEATAHFIAELAQQHQVNISRIAHGVPVGGELEYVDG 186
Query: 189 GTIFEAIRSR 198
T+ A+ R
Sbjct: 187 NTLSHALSGR 196
>gi|320104517|ref|YP_004180108.1| DNA replication and repair protein RecR [Isosphaera pallida ATCC
43644]
gi|319751799|gb|ADV63559.1| DNA replication and repair protein RecR [Isosphaera pallida ATCC
43644]
Length = 203
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI L R+PG G ++A R H++K + LAEA+ +V C IC N+ +
Sbjct: 8 VEKLIAELGRLPGVGAKTAERLAHHILKVPAEEALALAEAIRQAKQRVGYCPICHNLVES 67
Query: 70 DP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D CAIC D +RD +I VVE DL ALE + +YHVL G L+PL I E + +
Sbjct: 68 DHELCAICRDPRRDHGIICVVEQCRDLMALESAGTYQGVYHVLHGRLAPLQGISAEHLTL 127
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL R+ +RE+I A + +EG TA +I L G+ V IT+LA G+ GS L++ +
Sbjct: 128 ESLERRMRSGTVREVILATNPNLEGDGTALWISQHLGGLGVPITKLARGLASGSTLEFAN 187
Query: 188 DGTIFEAIRSRTVL 201
+ +A+ R
Sbjct: 188 KEMLVDALNGRQAF 201
>gi|22124969|ref|NP_668392.1| recombination protein RecR [Yersinia pestis KIM 10]
gi|45440658|ref|NP_992197.1| recombination protein RecR [Yersinia pestis biovar Microtus str.
91001]
gi|51595344|ref|YP_069535.1| recombination protein RecR [Yersinia pseudotuberculosis IP 32953]
gi|108808605|ref|YP_652521.1| recombination protein RecR [Yersinia pestis Antiqua]
gi|108811133|ref|YP_646900.1| recombination protein RecR [Yersinia pestis Nepal516]
gi|145600016|ref|YP_001164092.1| recombination protein RecR [Yersinia pestis Pestoides F]
gi|149365031|ref|ZP_01887066.1| recombination protein RecR [Yersinia pestis CA88-4125]
gi|153950897|ref|YP_001402017.1| recombination protein RecR [Yersinia pseudotuberculosis IP 31758]
gi|162418312|ref|YP_001607272.1| recombination protein RecR [Yersinia pestis Angola]
gi|165927675|ref|ZP_02223507.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935856|ref|ZP_02224426.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010982|ref|ZP_02231880.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213054|ref|ZP_02239089.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399385|ref|ZP_02304909.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422763|ref|ZP_02314516.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423751|ref|ZP_02315504.1| recombination protein RecR [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468906|ref|ZP_02333610.1| recombination protein RecR [Yersinia pestis FV-1]
gi|218930153|ref|YP_002348028.1| recombination protein RecR [Yersinia pestis CO92]
gi|229838719|ref|ZP_04458878.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896124|ref|ZP_04511294.1| gap repair protein [Yersinia pestis Pestoides A]
gi|229899287|ref|ZP_04514430.1| gap repair protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229901365|ref|ZP_04516487.1| gap repair protein [Yersinia pestis Nepal516]
gi|270489550|ref|ZP_06206624.1| recombination protein RecR [Yersinia pestis KIM D27]
gi|20139502|sp|Q8ZC97|RECR_YERPE RecName: Full=Recombination protein recR
gi|73621532|sp|Q66DP9|RECR_YERPS RecName: Full=Recombination protein recR
gi|123072674|sp|Q1C4P6|RECR_YERPA RecName: Full=Recombination protein recR
gi|123246655|sp|Q1CL30|RECR_YERPN RecName: Full=Recombination protein recR
gi|166223511|sp|A4TPA7|RECR_YERPP RecName: Full=Recombination protein recR
gi|166918743|sp|A7FL89|RECR_YERP3 RecName: Full=Recombination protein recR
gi|238687263|sp|A9R0Q4|RECR_YERPG RecName: Full=Recombination protein recR
gi|21957811|gb|AAM84643.1|AE013709_12 recombination and repair protein [Yersinia pestis KIM 10]
gi|45435516|gb|AAS61074.1| recombination protein RecR [Yersinia pestis biovar Microtus str.
91001]
gi|51588626|emb|CAH20234.1| putative recombination protein, gap repair [Yersinia
pseudotuberculosis IP 32953]
gi|108774781|gb|ABG17300.1| DNA replication and repair protein RecR [Yersinia pestis Nepal516]
gi|108780518|gb|ABG14576.1| DNA replication and repair protein RecR [Yersinia pestis Antiqua]
gi|115348764|emb|CAL21716.1| recombination protein RecR [Yersinia pestis CO92]
gi|145211712|gb|ABP41119.1| DNA replication and repair protein RecR [Yersinia pestis Pestoides
F]
gi|149291444|gb|EDM41518.1| recombination protein RecR [Yersinia pestis CA88-4125]
gi|152962392|gb|ABS49853.1| recombination protein RecR [Yersinia pseudotuberculosis IP 31758]
gi|162351127|gb|ABX85075.1| recombination protein RecR [Yersinia pestis Angola]
gi|165916001|gb|EDR34608.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920429|gb|EDR37706.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989982|gb|EDR42283.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205841|gb|EDR50321.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958354|gb|EDR55375.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051889|gb|EDR63297.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057921|gb|EDR67667.1| recombination protein RecR [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681294|gb|EEO77388.1| gap repair protein [Yersinia pestis Nepal516]
gi|229687689|gb|EEO79762.1| gap repair protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229695085|gb|EEO85132.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701047|gb|EEO89076.1| gap repair protein [Yersinia pestis Pestoides A]
gi|270338054|gb|EFA48831.1| recombination protein RecR [Yersinia pestis KIM D27]
gi|320016306|gb|ADV99877.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 201
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC++ +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 EHCTICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ + I E+I A + T+EG TA+YI + +R+A+G+P+G EL+ +D
Sbjct: 127 LLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSRT 199
T+ ++ R
Sbjct: 187 TTLSHSLAGRN 197
>gi|258621804|ref|ZP_05716835.1| recombination protein RecR [Vibrio mimicus VM573]
gi|258586035|gb|EEW10753.1| recombination protein RecR [Vibrio mimicus VM573]
Length = 197
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G
Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVG 178
>gi|26990958|ref|NP_746383.1| recombination protein RecR [Pseudomonas putida KT2440]
gi|148546839|ref|YP_001266941.1| recombination protein RecR [Pseudomonas putida F1]
gi|37999624|sp|Q88F32|RECR_PSEPK RecName: Full=Recombination protein recR
gi|166221956|sp|A5W0U7|RECR_PSEP1 RecName: Full=Recombination protein recR
gi|24985981|gb|AAN69847.1|AE016623_9 recombination protein RecR [Pseudomonas putida KT2440]
gi|148510897|gb|ABQ77757.1| DNA replication and repair protein RecR [Pseudomonas putida F1]
gi|313497893|gb|ADR59259.1| RecR [Pseudomonas putida BIRD-1]
Length = 200
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 7 IRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTQLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 126 LMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLVASRIAHGVPLGGELEMVDG 185
Query: 189 GTIFEAIRSR 198
GT+ A R
Sbjct: 186 GTLAHAFAGR 195
>gi|294789273|ref|ZP_06754511.1| recombination protein RecR [Simonsiella muelleri ATCC 29453]
gi|294482698|gb|EFG30387.1| recombination protein RecR [Simonsiella muelleri ATCC 29453]
Length = 197
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P G ++A+R L+ L++A+ N ++ C +C + + C
Sbjct: 8 LIHALKILPNVGNKTAQRMAHTLLHTNRDGAAQLSQAIENALKQIHNCQLCHDFCEGELC 67
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
AIC + QRDAS +++V+ AD+ A+E ++ + LY VL G ++P + I ++ LI
Sbjct: 68 AICANPQRDASRLMIVQMPADIAAMEAARCHDGLYFVLMGQVNPSQEMDLRSIALEQLIA 127
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + E+I A + T EG TA+ + + K KI+RLA G+P+GSEL+Y+D GT+
Sbjct: 128 RLSGSSVEEIIIATAHTAEGDATAYILAELFKNQHYKISRLARGMPLGSELEYVDAGTLA 187
Query: 193 EAIRSRTVL 201
+A+ R +L
Sbjct: 188 QAVYDRNLL 196
>gi|238783569|ref|ZP_04627590.1| hypothetical protein yberc0001_13510 [Yersinia bercovieri ATCC
43970]
gi|238715447|gb|EEQ07438.1| hypothetical protein yberc0001_13510 [Yersinia bercovieri ATCC
43970]
Length = 201
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+
Sbjct: 67 ERCTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D
Sbjct: 127 LLEKRLESETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDG 186
Query: 189 GTIFEAIRSR 198
T+ ++ R
Sbjct: 187 TTLSHSLAGR 196
>gi|294670722|ref|ZP_06735597.1| hypothetical protein NEIELOOT_02444 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307610|gb|EFE48853.1| hypothetical protein NEIELOOT_02444 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 201
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 109/189 (57%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P GP+SA+R L++ + L EA+ + +V C++C + + C
Sbjct: 11 LIHALKILPNVGPKSAQRMAYQLLQYNREGAEELVEALQHALKQVRHCTLCNTLCENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +RD +++V AD+ +E + + LY VL G +SPL + I ++ L+
Sbjct: 71 EICANPERDGKRLMIVHMPADVAGMEAAHCHDGLYFVLMGHISPLQDMDLGHIALEQLVG 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ +I E+I A + T EG TA+ + + LK + K++RLA G+P+G+EL+Y+D GT+
Sbjct: 131 RLQNSEIEEIIIATNFTAEGDATAYILAELLKNLPYKVSRLARGMPLGAELEYIDAGTLA 190
Query: 193 EAIRSRTVL 201
+A+ R L
Sbjct: 191 QAVYDRKQL 199
>gi|78355115|ref|YP_386564.1| DNA replication and repair protein RecR [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|78217520|gb|ABB36869.1| DNA replication and repair protein RecR [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 198
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ LAR+PG GP+SA R + L+K E L A+A + + + LC CG++
Sbjct: 3 EPLKALVDRLARLPGLGPKSALRMAMTLLKWPESETRGLGAAIAQLRDNLHLCRRCGSLT 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPCAIC D R + +V + L A+E Y +LGG L+PLD + PE + +
Sbjct: 63 DVDPCAICTDATRGRDTLCLVSEWDSLLAMEDGGFYKGQYMILGGLLAPLDNVNPESLEL 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYI--MDKLKGIDVKITRLAYGIPMGSELDY 185
+ L R+ ++RE+I + T+E + TA YI M V++TRLA GIP+GSE+ +
Sbjct: 123 ERLRRRLAEGEVREIILGLGTTLEAENTASYIRSMVNRDFPQVRVTRLAQGIPLGSEVKF 182
Query: 186 LDDGTIFEAIRSR 198
+D T+ ++++ R
Sbjct: 183 IDKETLRQSLQFR 195
>gi|163782475|ref|ZP_02177472.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
gi|159882048|gb|EDP75555.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
Length = 202
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVK----KKEQLLGPLAEAMANIYNKVC 58
+++ K ++ ++ + RIP +G R A R +L+K ++E ++ L EA K+
Sbjct: 4 EEVFPKSLKLALESVKRIPTYGERGASRLVYNLLKLSPEERELVVSSLTEAS----EKLK 59
Query: 59 LCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
C C + + CA+C D +R + VVE+ D +++ER + +YHVL G ++PL+
Sbjct: 60 PCKECYLLTEGELCAVCSDPRRSKKFVCVVEESQDAYSIERLERYKGVYHVLQGRIAPLE 119
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYG 176
+ P+D+ I L+ERIE ++RE+I A + EG+ TA+Y+M LK VK+TR++YG
Sbjct: 120 GVSPQDLTIDRLLERIEKNRVREIIIATNPNAEGEATANYLMKLLKDRFPSVKVTRVSYG 179
Query: 177 IPMGSELDYLDDGTIFEAIRSR 198
+ GS L+++D+ ++ ++ +R
Sbjct: 180 LQFGSLLEFVDELSLEKSFENR 201
>gi|332290072|ref|YP_004420924.1| recombination protein RecR [Gallibacterium anatis UMN179]
gi|330432968|gb|AEC18027.1| recombination protein RecR [Gallibacterium anatis UMN179]
Length = 200
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 9/197 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKE----QLLGPLAEAMANIYNKVCLCSICGN 65
++ L+ L +PG GP+SA+R +L+++ L L EAMA+I + CS C
Sbjct: 7 LDELMDALRCLPGVGPKSAQRMAYYLLQRDRSGAMNLAKTLTEAMAHIGH----CSQCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + +VE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEEVCNICNNYRRQENGQLCIVEMPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + TIEG TA+YI + + VK++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQTESFSEVILATNPTIEGDATANYIAEMCQQYGVKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R L
Sbjct: 183 MVDGTTLSHSFIGRREL 199
>gi|218887361|ref|YP_002436682.1| recombination protein RecR [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|259563693|sp|B8DQU5|RECR_DESVM RecName: Full=Recombination protein recR
gi|218758315|gb|ACL09214.1| recombination protein RecR [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 201
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L++ L+R+PG GP+SA R + L+K L A+ ++ + + LC CG +
Sbjct: 8 LKALVEQLSRLPGLGPKSALRLAMTLLKWPASETRRLGRAVHDLRDNLHLCGRCGALTDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D R + +V + L LE Y +LGG L+PLD + + + +
Sbjct: 68 DPCGICTDPARSGETLCLVSEWDSLLTLEEGGFYKGQYLILGGLLAPLDNLHADSLELDR 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLD 187
L +R+ +RE++ A+ T+E + TA YI + + + V++TRLA GIP+GSE+ ++D
Sbjct: 128 LTKRMAEGTVREVVMALGTTVEAENTATYIRNMIVRQYPQVRVTRLAQGIPLGSEVKFMD 187
Query: 188 DGTIFEAIRSR 198
T+ ++++ R
Sbjct: 188 RETLRQSMQYR 198
>gi|331011125|gb|EGH91181.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 200
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +PG G ++A+R L L+++ LA A+ + V C C +
Sbjct: 7 IRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRTLTEE 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI
Sbjct: 67 ELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ERI + E+I A + T+EG+ TAHYI L + +R+A+ +P+G ELD +D
Sbjct: 126 LMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHRVPLGGELDLVDG 185
Query: 189 GTIFEAIRSR 198
GT+ + R
Sbjct: 186 GTLAHSFAGR 195
>gi|238751047|ref|ZP_04612543.1| hypothetical protein yrohd0001_1800 [Yersinia rohdei ATCC 43380]
gi|238710737|gb|EEQ02959.1| hypothetical protein yrohd0001_1800 [Yersinia rohdei ATCC 43380]
Length = 191
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ LA+++ +++ C+ C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQDRCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L +
Sbjct: 61 ICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E + I E+I A + T+EG TA+YI V TR+A+G+P+G EL+ +D T+
Sbjct: 121 RLETETISEVILATNPTVEGDATANYIGQMCGQYGVLATRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRT 199
++ R
Sbjct: 181 HSLAGRN 187
>gi|170722748|ref|YP_001750436.1| recombination protein RecR [Pseudomonas putida W619]
gi|229470339|sp|B1JBZ1|RECR_PSEPW RecName: Full=Recombination protein recR
gi|169760751|gb|ACA74067.1| recombination protein RecR [Pseudomonas putida W619]
Length = 200
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI L +PG G ++A+R L L+++ LA+A++ V C C +
Sbjct: 7 IRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGVRLAQALSLAMEGVGHCRQCRTLTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GP+ IG+
Sbjct: 67 ELCPQCADTRRDDTQLCVVEGPMDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPDAIGVPQ 125
Query: 130 LIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ +D
Sbjct: 126 LMARIEEQGSFTEVILATNPTVEGEATAHYIAQLLAEKGLVASRIAHGVPLGGELELVDG 185
Query: 189 GTIFEAIRSR 198
GT+ A R
Sbjct: 186 GTLAHAFAGR 195
>gi|329119116|ref|ZP_08247807.1| recombination protein R [Neisseria bacilliformis ATCC BAA-1200]
gi|327464747|gb|EGF11041.1| recombination protein R [Neisseria bacilliformis ATCC BAA-1200]
Length = 201
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L L +P GP+SA+R HL++ LAEA+ + +V C+ C + C
Sbjct: 11 LTDALKTLPNVGPKSAQRIAFHLLQHNRDGATELAEALQHALKQVRHCTRCNTFCEDEIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+C D +RD +++V AD+ +E + + LY VL G ++P + E I ++ LI
Sbjct: 71 PVCADPERDGRRLMIVHMPADVAGMEAAHCHDGLYFVLMGQINPAQGMDLEHIALEKLIA 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ ++ E+I A T EG TA+ + + LK + KI+RLA G+P+G+EL+Y+D GT+
Sbjct: 131 RLGGGEVEEIIIATGFTAEGDATAYVLAELLKTLPCKISRLARGMPLGAELEYIDAGTLA 190
Query: 193 EAIRSRTVL 201
+A+ R L
Sbjct: 191 QAVYERRQL 199
>gi|327398752|ref|YP_004339621.1| recombination protein RecR [Hippea maritima DSM 10411]
gi|327181381|gb|AEA33562.1| recombination protein RecR [Hippea maritima DSM 10411]
Length = 201
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP--CAI 74
L IPG G ++A + L + K++ +++ + I KV C +C N+ + C I
Sbjct: 16 LKNIPGIGEKNASKYAFWLAEHKDKA-NSISKLLKEISEKVKSCRLCYNLTANENGICDI 74
Query: 75 CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERI 134
C D+ RD + VVE + +L +E + N LY +LGG +SP+ I I L+ RI
Sbjct: 75 CSDKSRDHETVCVVETIENLLEIETANVYNGLYFILGGVISPIYGIDSIIKRIDYLVSRI 134
Query: 135 EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEA 194
++ +ELI IS T EG+ T YI +KLK ++KIT++A G+P G++++Y++ T+ EA
Sbjct: 135 LKEQKKELILVISPTTEGELTMQYIKEKLKPSNIKITKVAIGVPAGADINYINKKTLIEA 194
Query: 195 IRSRTV 200
+ RTV
Sbjct: 195 FKMRTV 200
>gi|312880093|ref|ZP_07739893.1| recombination protein RecR [Aminomonas paucivorans DSM 12260]
gi|310783384|gb|EFQ23782.1| recombination protein RecR [Aminomonas paucivorans DSM 12260]
Length = 203
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ PG G +SARR L+++ + LAE + + C ICG +
Sbjct: 7 LDQLIERFRAFPGVGEKSARRMAFFLLQQPTPWVESLAEILRGAREHIHPCPICGALTDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDIGI 127
DPC +C D R + ++ VVE D ALE+S YHVLGG +SPL ++I PE +
Sbjct: 67 DPCPLCSDPGRRSELLCVVETPEDCIALEQSGVFRGRYHVLGGRVSPLEGEQIPPER--L 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L +RI+ I E+I A++ +EG TA + + L G+ VK++RLA G+P+G + + D
Sbjct: 125 DALRQRIQDGGIGEVILAMNPRVEGDLTAFTVQESLAGLPVKLSRLACGLPVGGSIGFAD 184
Query: 188 DGTIFEAIRSR 198
T+ A+ +R
Sbjct: 185 RVTLHVAMEAR 195
>gi|319638361|ref|ZP_07993123.1| recombination protein recR [Neisseria mucosa C102]
gi|317400110|gb|EFV80769.1| recombination protein recR [Neisseria mucosa C102]
Length = 201
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 104/186 (55%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P GP+SA+R L++ K + L +A+ +V C +C D C
Sbjct: 11 LINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHCRMCNTFCEGDLC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++RD S +++V AD+ ++E + + LY VL G +SP + + + L+
Sbjct: 71 EICADEKRDKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGMDISSVALDKLVV 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ I E+I A + T EG TA+ + + K + K++RLA GIP+G E++Y+D GT+
Sbjct: 131 RLQASDIEEIIIATNFTAEGDATAYILAELFKNLPYKVSRLARGIPLGGEMEYVDAGTLA 190
Query: 193 EAIRSR 198
+A+ R
Sbjct: 191 QAVYDR 196
>gi|320527139|ref|ZP_08028326.1| recombination protein RecR [Solobacterium moorei F0204]
gi|320132467|gb|EFW25010.1| recombination protein RecR [Solobacterium moorei F0204]
Length = 198
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 6/194 (3%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + LI+ L +PG G ++A R +++ Q A+A+ +++ K+ C ICGN+
Sbjct: 4 KSLTELIERLKFLPGVGEKTAERYAFSIMEMNLQEAKEFAQAINDVHEKITHCRICGNLS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D R+ I VV+ D+ A+E++ YHVL G +S I P D+ I
Sbjct: 64 EKEECEICRDDSRNQKQIFVVQSPKDVIAMEKTAEYRGTYHVLNGLISSSKGIMPNDLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL---KGIDVKITRLAYGIPMGSELD 184
+SL+ R+ + E+I + TI+G+TTA Y +DKL + V +TR+A+G+P G LD
Sbjct: 124 ESLLARL--PEAEEVILGTNITIDGETTAMY-LDKLITSRYPHVLVTRIAHGLPSGGMLD 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A+ R
Sbjct: 181 YADEMTLAHALADR 194
>gi|187918328|ref|YP_001883891.1| recombination protein RecR [Borrelia hermsii DAH]
gi|119861176|gb|AAX16971.1| recombination protein RecR [Borrelia hermsii DAH]
Length = 194
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI +++++PG G ++A R ++ K E+ L + ++N+++ + C C N
Sbjct: 3 IQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAEE 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+D R+ +VI VVE DL +E + + Y VL G L PL IGP + +
Sbjct: 63 EFCDICMDLSRNKNVICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNLDK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + + +E+I A +IEG TA+YI LK +D+ +TR+A G+P+G + D
Sbjct: 123 LEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNADKM 182
Query: 190 TIFEAIRSR 198
T A+R R
Sbjct: 183 TTLRALRLR 191
>gi|212704317|ref|ZP_03312445.1| hypothetical protein DESPIG_02372 [Desulfovibrio piger ATCC 29098]
gi|212672279|gb|EEB32762.1| hypothetical protein DESPIG_02372 [Desulfovibrio piger ATCC 29098]
Length = 204
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 113/190 (59%), Gaps = 4/190 (2%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ LAR+PG GP+SA R + L+K E L + + ++ + + LCS CG + TDPC
Sbjct: 12 LVEQLARLPGLGPKSAMRVAMTLLKWPEAETRRLGKGIHDLRDNLHLCSRCGGLSATDPC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS--L 130
IC D+ R + +V + + L+ + Y +LGG L+PL + + + + L
Sbjct: 72 DICKDENRSRDTLCLVNEWDSMLTLDEGGFYHGQYMILGGLLAPLANMDSDSLDLDLDRL 131
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMD--KLKGIDVKITRLAYGIPMGSELDYLDD 188
I R+E +IRELI A+ ATI+ + TA +I + + + ++++RLA GIP+G+E+ Y+D
Sbjct: 132 ISRLEEGEIRELILALGATIDAENTASFIRNLVRKRFPHIRVSRLAQGIPLGAEVKYMDR 191
Query: 189 GTIFEAIRSR 198
T+ ++++ R
Sbjct: 192 ETLRQSLQYR 201
>gi|303245253|ref|ZP_07331537.1| recombination protein RecR [Desulfovibrio fructosovorans JJ]
gi|302493102|gb|EFL52964.1| recombination protein RecR [Desulfovibrio fructosovorans JJ]
Length = 204
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L++ LAR+PG GP+SA + + L++ L E + + ++CLCS C + T
Sbjct: 13 ELVEQLARLPGLGPKSALKVAMTLLEWPRGRAETLGEGILRLRERLCLCSRCFGLSETPV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D RD+ + +V + LE + Y VLGG L PLD + P ++ + +L
Sbjct: 73 CPVCADPSRDSRQLCIVAQWDSIMLLEETAQFGGYYLVLGGLLDPLDGVTPGNLRLDALR 132
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLDDG 189
R+ I E I A+ AT+ ++TA +I + L + +V++TRLA GIP+G+E+ Y+D
Sbjct: 133 ARLREGDIAECILALGATLAAESTASHIKNLLAREFPNVRLTRLAQGIPLGTEVKYVDKE 192
Query: 190 TIFEAIRSR 198
T+ +++R R
Sbjct: 193 TLSQSLRYR 201
>gi|281358638|ref|ZP_06245116.1| recombination protein RecR [Victivallis vadensis ATCC BAA-548]
gi|281314868|gb|EFA98903.1| recombination protein RecR [Victivallis vadensis ATCC BAA-548]
Length = 210
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLV---KKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI L ++PG G R A R L ++ +K Q LG L E + C CG +
Sbjct: 11 VEELIGALKQLPGIGRRGAERLALSMLGWEPEKLQYLGKLVETLPATVGS---CPECGAL 67
Query: 67 -DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + CA+C RD ++ VVE +A ++A+E S YHVLGG LSPLD +
Sbjct: 68 SNAGELCAVCRLPDRDRQLVCVVETMAQVFAIEASGNFRGRYHVLGGRLSPLDAENGAGL 127
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ LI ++RE+I A+S +EG+ TA Y+ + L+ V++T+ A G+P G+ L Y
Sbjct: 128 NLEKLIGLARSGQVREIILALSPDVEGRATAIYLAELLRDAPVRVTQPALGLPAGANLSY 187
Query: 186 LDDGTIFEAIRSRTVL 201
D TI A+ RT+L
Sbjct: 188 ADGATIAAALSGRTIL 203
>gi|317153156|ref|YP_004121204.1| recombination protein RecR [Desulfovibrio aespoeensis Aspo-2]
gi|316943407|gb|ADU62458.1| recombination protein RecR [Desulfovibrio aespoeensis Aspo-2]
Length = 201
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +++ L+ +PG GP+SA R L L+K + + +A+ ++ +CLC C +
Sbjct: 8 LREVVEQLSSLPGVGPKSALRMALTLLKMPRERANGVGQAILDLRENLCLCEECACLAEA 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PCAIC D R+ + VV + L A+E Y VLGG LSPLD + P ++
Sbjct: 68 SPCAICADPSRETDQLCVVPEWDALLAMEDMGVFRGRYLVLGGLLSPLDGVSPANLETDR 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID---VKITRLAYGIPMGSELDYL 186
L + +RELI A+ AT++ + TA +I + + G D + ++RLA GIPMG E+ ++
Sbjct: 128 LRRHLRAGHVRELILALGATLDAEATASFIKN-MVGADFSGITVSRLAQGIPMGGEVKFM 186
Query: 187 DDGTIFEAIRSR 198
D T+ +++ R
Sbjct: 187 DRETLRQSLVHR 198
>gi|157375985|ref|YP_001474585.1| recombination protein RecR [Shewanella sediminis HAW-EB3]
gi|189029376|sp|A8FX84|RECR_SHESH RecName: Full=Recombination protein recR
gi|157318359|gb|ABV37457.1| recombination protein RecR [Shewanella sediminis HAW-EB3]
Length = 199
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L+++ + LA+A+A+ + V C C
Sbjct: 7 VDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGQTLAQALASAMSDVGHCRSCRTFTEE 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC +R S I VVE AD+ A+E + Y VL G LSPLD +GPE++G+
Sbjct: 67 SHCPICASNKRGQSEQICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLS 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L E + + ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+Y+D
Sbjct: 127 LLEEHLCSGGVSELILATNPTVEGDATAHFIADMAKVHNVSVSRIAHGVPVGGELEYVDS 186
Query: 189 GTIFEAIRSR 198
T+ + R
Sbjct: 187 TTLALSFNGR 196
>gi|225075251|ref|ZP_03718450.1| hypothetical protein NEIFLAOT_00254 [Neisseria flavescens
NRL30031/H210]
gi|241758800|ref|ZP_04756913.1| recombination protein RecR [Neisseria flavescens SK114]
gi|261380151|ref|ZP_05984724.1| recombination protein RecR [Neisseria subflava NJ9703]
gi|224953426|gb|EEG34635.1| hypothetical protein NEIFLAOT_00254 [Neisseria flavescens
NRL30031/H210]
gi|241321008|gb|EER57221.1| recombination protein RecR [Neisseria flavescens SK114]
gi|284796989|gb|EFC52336.1| recombination protein RecR [Neisseria subflava NJ9703]
Length = 201
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 104/186 (55%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P GP+SA+R L++ K + L +A+ +V C +C D C
Sbjct: 11 LINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHCRMCNTFCEGDLC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R+ S +++V AD+ ++E + + LY VL G +SP + + + L+
Sbjct: 71 EICADEKREKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGMDISAVALDKLVA 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ I E+I A + T EG TA+ + + K + K++RLA GIP+G E++Y+D GT+
Sbjct: 131 RLQASDIEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLGGEMEYVDAGTLA 190
Query: 193 EAIRSR 198
+A+ R
Sbjct: 191 QAVYDR 196
>gi|203284372|ref|YP_002222112.1| recombination protein RecR [Borrelia duttonii Ly]
gi|201083815|gb|ACH93406.1| recombination protein RecR [Borrelia duttonii Ly]
Length = 194
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 104/189 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI++++++PG G ++A R ++ E L + + ++ ++ C C N
Sbjct: 3 IQDLIELVSKLPGIGKKTAARMVYDILYTGENFSRTLGQILIRLHLEIQKCKNCYNFAEE 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + R+ +I VVE DL +E +K + Y VL G L PL IGP+++ +
Sbjct: 63 ELCNICTNLNRNKGIICVVEMPQDLEVIEATKEYDGFYFVLHGHLDPLRNIGPDELNLNK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I++ K E+I A +IEG TA+YI + LK +D+ +TR+A G+P G + D
Sbjct: 123 LENYIKLLKAEEVIIATEFSIEGDVTANYISNLLKDLDINVTRIASGLPAGGSISNADKV 182
Query: 190 TIFEAIRSR 198
T A+R R
Sbjct: 183 TTLRALRLR 191
>gi|318040218|ref|ZP_07972174.1| recombination protein RecR [Synechococcus sp. CB0101]
Length = 145
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C ++ C IC +++R+ V+ VV D DL ALER++ YHVLGG +SP+D
Sbjct: 4 CQRCYHLSADPLCEICRNEERNTGVLCVVADSRDLLALERTREFRGGYHVLGGLISPMDG 63
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GPE + IQ L+ER++ + E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+
Sbjct: 64 VGPELLQIQPLVERVDRDGVSEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPV 122
Query: 180 GSELDYLDDGTIFEAIRSR 198
GSEL+Y D+ T+ A+ R
Sbjct: 123 GSELEYADEVTLARALEGR 141
>gi|238795500|ref|ZP_04639015.1| hypothetical protein ymoll0001_10900 [Yersinia mollaretii ATCC
43969]
gi|238720619|gb|EEQ12420.1| hypothetical protein ymoll0001_10900 [Yersinia mollaretii ATCC
43969]
Length = 191
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ LA+++ +++ C+ C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQDRCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L +
Sbjct: 61 ICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLESETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRT 199
++ R
Sbjct: 181 HSLAGRN 187
>gi|162448527|ref|YP_001610894.1| DNA repair and genetic recombination protein [Sorangium cellulosum
'So ce 56']
gi|161159109|emb|CAN90414.1| DNA repair and genetic recombination protein [Sorangium cellulosum
'So ce 56']
Length = 238
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 114/196 (58%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ + ++LAR+PG G ++A+R L LV E L + + + + C CG++
Sbjct: 39 LSRVAQLLARLPGVGEKTAQRFALFLVTAGEDTARDLGGELVELCDHIRPCIRCGHIAEL 98
Query: 70 DP-----CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC+D +RD +++ VV V DL A+ERS A+ Y VLG LSPL+ +G E+
Sbjct: 99 DDGGRALCAICLDTRRDGALLCVVARVQDLLAIERSGAMRGRYFVLGRLLSPLEGVGAEE 158
Query: 125 IGIQSLIERIE--VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ +++L R+ + +RE++ A +++G+ TA + +L + +++TR+A G+P G +
Sbjct: 159 LPLEALRARVRDPEQPVREVLVATPPSVDGEATALLLARELGAMGIQVTRIASGVPHGGD 218
Query: 183 LDYLDDGTIFEAIRSR 198
L++ D T+ AI R
Sbjct: 219 LEFADQVTLGRAIEGR 234
>gi|298368786|ref|ZP_06980104.1| recombination protein RecR [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282789|gb|EFI24276.1| recombination protein RecR [Neisseria sp. oral taxon 014 str.
F0314]
Length = 206
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P GP+SA+R L++ K + L +A+ N V C +C + C
Sbjct: 16 LINALKVLPNVGPKSAQRMAHQLLQHKREEAQELVDALQNALRLVHHCKLCNTFCEEELC 75
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D R+ +++V AD+ +E + + LY VL G +SP + + + LIE
Sbjct: 76 GICSDSDRNPHRLMIVHMPADVSNMEAANCHDGLYFVLMGQISPAQGMDLSAVALDKLIE 135
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + E+I A + T EG TA+ + + K + K++RLA GIP+G EL+Y+D GT+
Sbjct: 136 RLQNSETEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLGGELEYVDAGTLA 195
Query: 193 EAIRSR 198
+A+ R
Sbjct: 196 QAVYER 201
>gi|46581602|ref|YP_012410.1| recombination protein RecR [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601238|ref|YP_965638.1| recombination protein RecR [Desulfovibrio vulgaris DP4]
gi|46451025|gb|AAS97670.1| recombination protein RecR [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561467|gb|ABM27211.1| DNA replication and repair protein RecR [Desulfovibrio vulgaris
DP4]
gi|311235245|gb|ADP88099.1| recombination protein RecR [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ L+ LA++PG GP+SA R + L+K L + ++ + + LC CG +
Sbjct: 8 LKALVDQLAKLPGLGPKSALRLAMTLLKWPASETRRLGRGIHDLRDNLHLCRRCGALTDC 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCA+C D R ++ +V + + LE Y +LGG L+PLD + + + ++
Sbjct: 68 DPCALCTDATRTQDMLCLVSEWDSMLTLEEGGFYRGQYLILGGLLAPLDNVNADSLELER 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYI--MDKLKGIDVKITRLAYGIPMGSELDYLD 187
L R+ ++RE++ A+ T+E + TA +I M + + V++TRLA GIP+G+E+ ++D
Sbjct: 128 LTRRLAEGQVREVVLALGTTVEAENTATFIRAMVERQYPGVRVTRLAQGIPLGAEVKFMD 187
Query: 188 DGTIFEAIRSRTVL 201
T+ ++++ R L
Sbjct: 188 RETLRQSMQYRQEL 201
>gi|237808960|ref|YP_002893400.1| recombination protein RecR [Tolumonas auensis DSM 9187]
gi|259563707|sp|C4L8U4|RECR_TOLAT RecName: Full=Recombination protein recR
gi|237501221|gb|ACQ93814.1| recombination protein RecR [Tolumonas auensis DSM 9187]
Length = 200
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI+ L +PG GP+SA+R L++++ + L + + ++ C C
Sbjct: 7 LDALIRELQVLPGVGPKSAQRMAFQLLERERKRGMQLGQTLQRALTEIGHCQHCRTFTEN 66
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + +R ++ + +VE AD+ A+E++ + Y VL G LSPLD IGP+++G+
Sbjct: 67 SLCDICANPKRAESGQLCIVETPADVAAIEQTHLYSGRYFVLMGHLSPLDGIGPKELGLD 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ++ + +E+I A + TIEG TA YI K + ITR+A+G+P+G EL+ +D
Sbjct: 127 QLDNVLQGGQWKEVILATNPTIEGDATAFYIASMAKRYQINITRIAHGVPVGGELELVDG 186
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 187 TTLSHSLSGRRPL 199
>gi|170025413|ref|YP_001721918.1| recombination protein RecR [Yersinia pseudotuberculosis YPIII]
gi|186894363|ref|YP_001871475.1| recombination protein RecR [Yersinia pseudotuberculosis PB1/+]
gi|294504859|ref|YP_003568921.1| recombination protein RecR [Yersinia pestis Z176003]
gi|169751947|gb|ACA69465.1| recombination protein RecR [Yersinia pseudotuberculosis YPIII]
gi|186697389|gb|ACC88018.1| recombination protein RecR [Yersinia pseudotuberculosis PB1/+]
gi|262362923|gb|ACY59644.1| recombination protein RecR [Yersinia pestis D106004]
gi|262366844|gb|ACY63401.1| recombination protein RecR [Yersinia pestis D182038]
gi|294355318|gb|ADE65659.1| recombination protein RecR [Yersinia pestis Z176003]
Length = 191
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C + C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC++ +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L +
Sbjct: 61 ICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + I E+I A + T+EG TA+YI + +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRT 199
++ R
Sbjct: 181 HSLAGRN 187
>gi|213018575|ref|ZP_03334383.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995526|gb|EEB56166.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 118
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 83/112 (74%)
Query: 87 VVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAI 146
VVE++ DLWA E+ + +YHVLGG LS ++ IGP+++ + ++ +R+ KI E+I AI
Sbjct: 3 VVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDNIPKRVTEFKIEEVIIAI 62
Query: 147 SATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ T+EGQ TA YI++ LK +VKI+RLA GIP+G E+DYLD+GT+ A+ SR
Sbjct: 63 NPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDYLDEGTLKIALTSR 114
>gi|94987360|ref|YP_595293.1| recombinational DNA repair protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731609|emb|CAJ54972.1| Recombinational DNA repair protein (RecF pathway)
ref|ZP_00131299.1| 353: Recombinational DNA repair
protein (RecF pathway) [Lawsonia intracellularis
PHE/MN1-00]
Length = 203
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ +I L ++PG GP+SA R + +K E L +++ + +K+ LCS CG + +
Sbjct: 9 LRTVIGQLTKLPGLGPKSAMRIAMTFLKWPESETRSLGKSIYELRDKLGLCSSCGALSDS 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D +R +++ +V + + LE Y +LGG L+PLD +G + + I
Sbjct: 69 NLCFVCADSERLDNLLCIVSEWDSMVTLEEVGFFQGRYMILGGLLAPLDNMGLDKLEIDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLD 187
LI+R+ +++E+I A+ +TIE +TTA I + + +++TRLA GIP+G+E+ ++D
Sbjct: 129 LIDRLNKGEVKEVILALGSTIEAETTATMIYSLISKRFPYIRVTRLAQGIPLGAEVKFMD 188
Query: 188 DGTIFEAIRSRTVL 201
T+ ++++ R L
Sbjct: 189 RETLRQSLQYRQEL 202
>gi|59801182|ref|YP_207894.1| putative recombination protein [Neisseria gonorrhoeae FA 1090]
gi|293399049|ref|ZP_06643214.1| recombination protein RecR [Neisseria gonorrhoeae F62]
gi|73621500|sp|Q5F8K5|RECR_NEIG1 RecName: Full=Recombination protein recR
gi|59718077|gb|AAW89482.1| putative recombination protein [Neisseria gonorrhoeae FA 1090]
gi|291610463|gb|EFF39573.1| recombination protein RecR [Neisseria gonorrhoeae F62]
Length = 205
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL+++K + L +A+ +VC C+ C
Sbjct: 9 FQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVCHCARCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|203287906|ref|YP_002222921.1| recombination protein RecR [Borrelia recurrentis A1]
gi|201085126|gb|ACH94700.1| recombination protein RecR [Borrelia recurrentis A1]
Length = 194
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 104/189 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI++++++PG G ++A R ++ + L + + ++ ++ C C N
Sbjct: 3 IQDLIELVSKLPGIGKKTAARMVYDILYTGKNFSRALGQILIRLHLEIQKCKNCYNFAEE 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + R+ +I VVE DL +E +K + Y VL G L PL IGP+++ +
Sbjct: 63 ELCDICTNLNRNKGIICVVEMPQDLEVIEATKEYDGFYFVLHGHLDPLRNIGPDELNLDK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I++ K E+I A +IEG TA+YI + LK +D+ +TR+A G+P G + D
Sbjct: 123 LENYIKLLKAEEVIIATEFSIEGDVTANYISNLLKDLDINVTRIASGLPAGGSISNADKV 182
Query: 190 TIFEAIRSR 198
T A+R R
Sbjct: 183 TTLRALRLR 191
>gi|134147639|gb|ABO63960.1| RecR [Bacillus thuringiensis]
gi|134147641|gb|ABO63961.1| RecR [Bacillus thuringiensis]
Length = 152
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 87/142 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG++
Sbjct: 7 ISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDR 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI I
Sbjct: 67 DPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDINIPQ 126
Query: 130 LIERIEVKKIRELIFAISATIE 151
L++R+ + ++E+I A + IE
Sbjct: 127 LLKRLHDETVQEVILATNPGIE 148
>gi|218283246|ref|ZP_03489307.1| hypothetical protein EUBIFOR_01895 [Eubacterium biforme DSM 3989]
gi|218216001|gb|EEC89539.1| hypothetical protein EUBIFOR_01895 [Eubacterium biforme DSM 3989]
Length = 195
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++LI ++PG G ++A R ++ E + +AE + N+ KV C+ CGN+
Sbjct: 4 KTFDDLIYEFQKLPGVGAKTAERYAFTVLSWNEDEISEMAETLINLKKKVKKCTCCGNLT 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C C +R+ ++I VV++ D+ +E + N +YHVL G ++ + P+ + I
Sbjct: 64 EDELCEFCKSSKRNQNIICVVQNPKDISVIESMQEFNGVYHVLDGLINTQKGVLPDQLNI 123
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL++RI + E+I A+ T+EG+TTA YI L+G +++RLA+GIP+GS LDY D
Sbjct: 124 MSLLKRIN-ENTEEVILALDPTVEGETTALYISKLLEG-KCRVSRLAHGIPVGSHLDYTD 181
Query: 188 DGTIFEAIRSR 198
T+ +A R
Sbjct: 182 AMTLLKAFEGR 192
>gi|325266073|ref|ZP_08132759.1| recombination protein R [Kingella denitrificans ATCC 33394]
gi|324982711|gb|EGC18337.1| recombination protein R [Kingella denitrificans ATCC 33394]
Length = 207
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 110/201 (54%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K T LI+ L +P G ++A+R L+++ + LA A+ +V C
Sbjct: 1 MTTKKTTNAYTALIQALRILPNVGAKTAQRMAHTLLQENREGAAELAAALDTALKQVSNC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C C IC D+ RD + +++V AD+ A+E ++ + LY VL G +SP +
Sbjct: 61 QSCNTFCEGGTCEICADETRDPTRLMIVHMPADVAAMEAARCHDGLYFVLMGQVSPAQNM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I ++ LI R+ + E+I A S T EG TA+ + + LKG KI+RLA G+P+G
Sbjct: 121 DLGSIALEKLIARLAGSPVTEIIIATSFTAEGDATAYILSELLKGQPYKISRLARGMPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SEL+Y+D GT+ +A+ R++L
Sbjct: 181 SELEYVDAGTLAQAVYERSLL 201
>gi|255024678|ref|ZP_05296664.1| recombination protein RecR [Listeria monocytogenes FSL J1-208]
Length = 139
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 83/133 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG GP+SA R +++ KE + A+A+ + + CS+CG++
Sbjct: 7 ITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDK 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I
Sbjct: 67 DPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPD 126
Query: 130 LIERIEVKKIREL 142
L++R++ I E+
Sbjct: 127 LLKRLQDDTIEEV 139
>gi|50365492|ref|YP_053917.1| recombination protein [Mesoplasma florum L1]
gi|50364048|gb|AAT76033.1| recombination protein [Mesoplasma florum L1]
Length = 196
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 3/177 (1%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD 81
G +++ R +L+ K L ++ + I + +C IC + C IC D+ R+
Sbjct: 18 GLTKKTSERLVNNLIIDKFAL-DNFSKQLNFIKDNFSICPICNYYQIKNECLICSDETRN 76
Query: 82 ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRE 141
+VI VV D+ +E+ LYHVLG ++ + P +I +SL+ RIE K E
Sbjct: 77 QNVICVVASQLDVNNIEKINKYKGLYHVLGSEINLNKKRSPSEINFESLLSRIE--KNTE 134
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
LI A++AT EG+ T +YI K +++ ITR+A GIPMG LDY+D+ T+ A ++R
Sbjct: 135 LILALNATFEGELTTNYIYQLTKNMNINITRIAKGIPMGGSLDYMDETTLESAFKNR 191
>gi|255067895|ref|ZP_05319750.1| recombination protein RecR [Neisseria sicca ATCC 29256]
gi|255047883|gb|EET43347.1| recombination protein RecR [Neisseria sicca ATCC 29256]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
LI L +P GP+SA+R L++ K + L +A+ +V C +C C
Sbjct: 11 LINALKILPNVGPKSAQRMAHQLLQSKREQAQELVDALQYALKQVQHCRMCNTFCEGSLC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D+ RD +++V AD+ +E + + LY VL G +SP + I + L+
Sbjct: 71 DICSDESRDKHRLMIVHMPADVSNMETANCHDGLYFVLMGQISPAQGMDVSAIALDKLVA 130
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + E+I A + T EG TA+ + + K + K++RLA GIP+G EL+Y+D GT+
Sbjct: 131 RLQNADVEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLGGELEYVDAGTLA 190
Query: 193 EAIRSR 198
+A+ R
Sbjct: 191 QAVYER 196
>gi|332970689|gb|EGK09670.1| recombination protein R [Kingella kingae ATCC 23330]
Length = 207
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 8/194 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKE----QLLGPLAEAMANIYNKVCLCSICGNVD 67
NLI L +P G ++A+R L+++ QLL L A+ I+N C +C
Sbjct: 12 NLIHALRVLPNVGVKTAQRMAFALLQQNRDGAAQLLSALDLALKQIHN----CQLCNTFC 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C C D +RD+ +++V AD+ A+E ++ + LY VL G +SP + I +
Sbjct: 68 QDDLCHTCTDPRRDSRRLMIVHMPADVSAMELARCHDGLYFVLMGQVSPTQDMDLSHIAL 127
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ RI + E+I A + T EG TA+ + + KI+RLA G+P+GSEL+Y+D
Sbjct: 128 DKLVARIAQHPVDEIIIATAFTAEGDATAYVLSELFANQPYKISRLARGMPLGSELEYVD 187
Query: 188 DGTIFEAIRSRTVL 201
GT+ +A+ R +L
Sbjct: 188 AGTLAQAVYERQLL 201
>gi|256828011|ref|YP_003156739.1| recombination protein RecR [Desulfomicrobium baculatum DSM 4028]
gi|256577187|gb|ACU88323.1| recombination protein RecR [Desulfomicrobium baculatum DSM 4028]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 2/194 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ ++ + +PG GP+SA R L L+K E+ + + + + + +CS C + +
Sbjct: 8 LQKIVDQFSALPGVGPKSALRMALTLLKWPEESVRSFGRDIEGLRSALHICSRCCGLADS 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC +C D +R + +V + L +E S Y +LGG LSPLD I + +
Sbjct: 68 DPCHLCADPKRTPEQLCLVSEWDSLMVMEESGIFKGRYLILGGLLSPLDGIDARSLEMDK 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLD 187
L + ++RE+I A+ +T+E + T Y+ + L DV +TRLA GIP+GSEL Y+D
Sbjct: 128 LESILREGQVREVILALGSTMEAEATGSYVHNLLTRSFPDVAVTRLAQGIPLGSELKYVD 187
Query: 188 DGTIFEAIRSRTVL 201
T+ ++++ R L
Sbjct: 188 RETLKQSLKHRQSL 201
>gi|87302304|ref|ZP_01085129.1| RecR protein [Synechococcus sp. WH 5701]
gi|87283229|gb|EAQ75185.1| RecR protein [Synechococcus sp. WH 5701]
Length = 159
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 46 LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNA 105
A+A+ +V CS C ++ C IC +++R + VV D DL ALER++
Sbjct: 4 FADALIAARRQVGQCSRCFHLSADRLCDICRNEERRNGQLCVVADSRDLLALERTREYKG 63
Query: 106 LYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG 165
YHVLGG +SP+D IGPE + IQ L+ R++ + + E+I A+ ++EG TT+ Y+ L+
Sbjct: 64 SYHVLGGLISPMDGIGPELLQIQPLVNRVDQETMTEVILALPPSVEGDTTSLYLARLLRP 123
Query: 166 IDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ ++R+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 124 FCL-VSRIAYGLPVGSELEYADEVTLARALEGR 155
>gi|171920181|ref|ZP_02931568.1| recombination protein RecR [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701809|ref|ZP_02971483.1| recombination protein RecR [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|171902557|gb|EDT48846.1| recombination protein RecR [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701095|gb|EDU19377.1| recombination protein RecR [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 201
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E E L+ L +PG G ++A + L+++ ++ + L + + + C C N
Sbjct: 6 EFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCANFTN 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC+++ RD + +++V DL +E + N LYH+ G +S + E I+
Sbjct: 66 KDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEHTNIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187
++ ER+ +E+I A S T +G+ TA YI+ L+ I D++I R+ +GIP+ S +DY D
Sbjct: 126 TIKERVLNGSFKEIIIATSYTHDGEVTADYIIKMLEDIKDLQIYRIGFGIPLNSSIDYAD 185
Query: 188 DGTIFEAI 195
D T+ +++
Sbjct: 186 DETLKQSL 193
>gi|13357645|ref|NP_077919.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170762232|ref|YP_001752169.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508466|ref|ZP_02958003.1| recombination protein RecR [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|20139832|sp|Q9PR56|RECR_UREPA RecName: Full=Recombination protein recR
gi|189029381|sp|B1AI75|RECR_UREP2 RecName: Full=Recombination protein recR
gi|11277992|pir||H82935 recombinational DNA repair protein UU089 [imported] - Ureaplasma
urealyticum
gi|6899041|gb|AAF30494.1|AE002108_7 recombinational DNA repair protein [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827809|gb|ACA33071.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675882|gb|EDT87787.1| recombination protein RecR [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 201
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E E L+ L +PG G ++A + L+++ ++ + L + + + C C N
Sbjct: 6 EFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCANFTN 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC+++ RD + +++V DL +E + N LYH+ G +S + E I+
Sbjct: 66 KDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEHTNIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187
++ ER+ +E+I A S T +G+ TA YI+ L+ I D++I R+ +GIP+ S +DY D
Sbjct: 126 TIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPLNSSIDYAD 185
Query: 188 DGTIFEAI 195
D T+ +++
Sbjct: 186 DETLKQSL 193
>gi|254431560|ref|ZP_05045263.1| recombination protein RecR [Cyanobium sp. PCC 7001]
gi|197626013|gb|EDY38572.1| recombination protein RecR [Cyanobium sp. PCC 7001]
Length = 145
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C ++ C IC +++R + VV D DL A+ER++ YHVLGG +SP+D
Sbjct: 4 CQRCFHLSAEPLCEICRNEERRNGQLCVVADSRDLLAMERTREFRGGYHVLGGLISPMDG 63
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGPE + IQ L++R+ + E+I A++ ++EG TT+ Y+ LK ++R+AYG+P+
Sbjct: 64 IGPELLQIQPLVQRVAADGVEEVILALTPSVEGDTTSLYLARLLKPF-TTVSRIAYGLPV 122
Query: 180 GSELDYLDDGTIFEAIRSR 198
GSEL+Y D+ T+ A R
Sbjct: 123 GSELEYADEVTLARAFEGR 141
>gi|206896103|ref|YP_002246821.1| recombination protein RecR [Coprothermobacter proteolyticus DSM
5265]
gi|206738720|gb|ACI17798.1| recombination protein RecR [Coprothermobacter proteolyticus DSM
5265]
Length = 201
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
+E L K R+PG GPR+A + + + ++ + N ++ LC C N+
Sbjct: 3 LEELSKQFRRLPGVGPRTAEKMAYYWLTLEDDEAERFLRTLENFRRQITLCKRCHNLAVG 62
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+D C IC D +RD + I+VVE D+ +E++ + YHVL G +SP + PE + I
Sbjct: 63 SDLCNICQDNRRDKA-IVVVETPQDVENIEQAGIYHGYYHVLHGLISPRKGVTPEQLFIS 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSELDYL 186
L +RI + I ++I A S T+EG TA Y+ +LK + ++ I RL G+P+G EL+Y
Sbjct: 122 DLFDRIVDEGITQVIIATSFTMEGDITADYLAKQLKTLQPNIPIYRLGTGLPVGGELNYA 181
Query: 187 DDGTIFEAI 195
D T+ A
Sbjct: 182 DKATLRAAF 190
>gi|15677109|ref|NP_274261.1| recombination protein RecR [Neisseria meningitidis MC58]
gi|121634930|ref|YP_975175.1| putative recombination protein [Neisseria meningitidis FAM18]
gi|254805017|ref|YP_003083238.1| recombination protein RecR [Neisseria meningitidis alpha14]
gi|20139759|sp|Q9JZ92|RECR_NEIMB RecName: Full=Recombination protein recR
gi|166221948|sp|A1KU46|RECR_NEIMF RecName: Full=Recombination protein recR
gi|7226477|gb|AAF41618.1| recombination protein RecR [Neisseria meningitidis MC58]
gi|120866636|emb|CAM10387.1| putative recombination protein [Neisseria meningitidis FAM18]
gi|254668559|emb|CBA06030.1| recombination protein RecR [Neisseria meningitidis alpha14]
gi|254670087|emb|CBA04989.1| recombination protein RecR [Neisseria meningitidis alpha153]
gi|325140533|gb|EGC63054.1| recombination protein RecR [Neisseria meningitidis CU385]
gi|325144619|gb|EGC66918.1| recombination protein RecR [Neisseria meningitidis M01-240013]
Length = 206
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 10 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHCAMCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|154484286|ref|ZP_02026734.1| hypothetical protein EUBVEN_01998 [Eubacterium ventriosum ATCC
27560]
gi|149734763|gb|EDM50680.1| hypothetical protein EUBVEN_01998 [Eubacterium ventriosum ATCC
27560]
Length = 163
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 39 KEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALE 98
KEQ+ LA +M + V C C + D C IC ++RD I+VVE D+ A E
Sbjct: 3 KEQV-ESLANSMIDAKKNVRYCKCCYTLTDQDICPICSSKERDHKTIMVVETTKDMAAYE 61
Query: 99 RSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHY 158
+ +YH+L G+++P+ IG DI ++ L ER++ + E+I A ++++EG+ TA Y
Sbjct: 62 KIGEYKGVYHILHGAINPMAGIGQNDIKLKELFERLK-DDVNEVIIATNSSVEGEATAMY 120
Query: 159 IMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
I +K + +K+TR+A G+P+G +L+Y+D+ T+ A++ R +
Sbjct: 121 ITKVIKPLGIKVTRIASGVPVGGDLEYVDNVTLLRALQGRVTV 163
>gi|261392501|emb|CAX50052.1| recombination protein RecR [Neisseria meningitidis 8013]
gi|316985096|gb|EFV64049.1| recombination protein RecR [Neisseria meningitidis H44/76]
gi|325128357|gb|EGC51241.1| recombination protein RecR [Neisseria meningitidis N1568]
gi|325132579|gb|EGC55272.1| recombination protein RecR [Neisseria meningitidis M6190]
gi|325134516|gb|EGC57161.1| recombination protein RecR [Neisseria meningitidis M13399]
gi|325138352|gb|EGC60921.1| recombination protein RecR [Neisseria meningitidis ES14902]
gi|325142492|gb|EGC64896.1| recombination protein RecR [Neisseria meningitidis 961-5945]
gi|325198370|gb|ADY93826.1| recombination protein RecR [Neisseria meningitidis G2136]
gi|325200132|gb|ADY95587.1| recombination protein RecR [Neisseria meningitidis H44/76]
gi|325204221|gb|ADY99674.1| recombination protein RecR [Neisseria meningitidis M01-240355]
gi|325205987|gb|ADZ01440.1| recombination protein RecR [Neisseria meningitidis M04-240196]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 9 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHCAMCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|161870080|ref|YP_001599250.1| recombination protein RecR [Neisseria meningitidis 053442]
gi|226739006|sp|A9LZB7|RECR_NEIM0 RecName: Full=Recombination protein recR
gi|161595633|gb|ABX73293.1| recombination protein [Neisseria meningitidis 053442]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 9 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCAMCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|323160542|gb|EFZ46488.1| recombination protein RecR [Escherichia coli E128010]
Length = 160
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 46 LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVN 104
LA+A+ +++ C+ C + C IC + +R + I VVE AD++A+E++ +
Sbjct: 2 LAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS 61
Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
Y VL G LSPLD IGP+DIG+ L +R+ +KI E+I A + T+EG+ TA+YI +
Sbjct: 62 GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA 121
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
DV+ +R+A+G+P+G EL+ +D T+ ++ R
Sbjct: 122 QYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 155
>gi|194098674|ref|YP_002001736.1| recombination protein RecR [Neisseria gonorrhoeae NCCP11945]
gi|240014108|ref|ZP_04721021.1| recombination protein RecR [Neisseria gonorrhoeae DGI18]
gi|240112968|ref|ZP_04727458.1| recombination protein RecR [Neisseria gonorrhoeae MS11]
gi|240121670|ref|ZP_04734632.1| recombination protein RecR [Neisseria gonorrhoeae PID24-1]
gi|240123572|ref|ZP_04736528.1| recombination protein RecR [Neisseria gonorrhoeae PID332]
gi|240128276|ref|ZP_04740937.1| recombination protein RecR [Neisseria gonorrhoeae SK-93-1035]
gi|238690202|sp|B4RLV1|RECR_NEIG2 RecName: Full=Recombination protein recR
gi|193933964|gb|ACF29788.1| putative recombination protein [Neisseria gonorrhoeae NCCP11945]
gi|317164276|gb|ADV07817.1| recombination protein RecR [Neisseria gonorrhoeae TCDC-NG08107]
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL+++K + L +A+ +V C+ C
Sbjct: 10 FQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVRHCARCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|185178817|ref|ZP_02964608.1| recombination protein RecR [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188024394|ref|ZP_02997057.1| recombination protein RecR [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188518705|ref|ZP_03004130.1| recombination protein RecR [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|188524138|ref|ZP_03004210.1| recombination protein RecR [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195867497|ref|ZP_03079501.1| recombination protein RecR [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198273388|ref|ZP_03205924.1| recombination protein RecR [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209554293|ref|YP_002284514.1| recombination protein RecR [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550632|ref|ZP_03771581.1| recombination protein RecR [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551045|ref|ZP_03771991.1| recombination protein RecR [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|238058669|sp|B5ZAS4|RECR_UREU1 RecName: Full=Recombination protein recR
gi|184209448|gb|EDU06491.1| recombination protein RecR [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188018663|gb|EDU56703.1| recombination protein RecR [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188997707|gb|EDU66804.1| recombination protein RecR [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659812|gb|EDX53192.1| recombination protein RecR [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660973|gb|EDX54226.1| recombination protein RecR [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198249908|gb|EDY74688.1| recombination protein RecR [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209541794|gb|ACI60023.1| recombination protein RecR [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378860|gb|EEH01225.1| recombination protein RecR [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379786|gb|EEH02148.1| recombination protein RecR [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 201
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E E L+ L +PG G ++A++ L+++ ++ + + + + + C C N
Sbjct: 6 EFEMLVDALKSLPGVGTKNAKKWAFFLLQQDQKYIDDFIKRIKDAKTNIIKCKYCSNFGN 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + RD + +++V DL +E + N LYH+ G +S + E I+
Sbjct: 66 KDECDICSNDYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEVSLRKNVVIEHTNIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187
+ ER+ +E+I A S T +G+ TA YI+ L+ I D++I R+ +GIP+ S +DY D
Sbjct: 126 IIKERVLNGSFKEIIIATSYTHDGEVTADYIVKMLEDIKDIQIYRIGFGIPLNSSIDYAD 185
Query: 188 DGTIFEAIRSR 198
D T+ ++I ++
Sbjct: 186 DETLKQSIANK 196
>gi|330976059|gb|EGH76125.1| recombination protein RecR [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 161
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 46 LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNA 105
LA+A+ + V C C + + C C D +RD +++ VVE D++A+E++
Sbjct: 4 LAQALGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRG 62
Query: 106 LYHVLGGSLSPLDRIGPEDIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLK 164
Y VL G LSPLD +GPE IGI L+ER+ + E+I A + T+EG+ TAHYI L
Sbjct: 63 RYFVLKGHLSPLDGLGPEAIGIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLH 122
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +R+A+G+P+G ELD +D GT+ + R
Sbjct: 123 DKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGR 156
>gi|88800843|ref|ZP_01116398.1| recombination protein RecR [Reinekea sp. MED297]
gi|88776416|gb|EAR07636.1| recombination protein RecR [Reinekea sp. MED297]
Length = 203
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70
E LI+ L +PG G RSA+R L L++++ + L+ A+++ V C C + D
Sbjct: 8 EKLIQALQALPGVGVRSAQRMALQLLEREPETGQRLSSALSDALTLVHKCPQCRTLTEDD 67
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C +C + RDASVI VV D +E S A Y VL G LSP+D IGPE +G+ L
Sbjct: 68 LCGVCANPDRDASVICVVASDVDRAGIEMSAAFQGRYFVLHGVLSPIDGIGPETLGLVEL 127
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
+E ++ E++ A+ +E + T H+I ++ K + +TR+ + LD D
Sbjct: 128 VELARSGEVSEIMLALDDRLESEATVHFIKEQFKESGLTVTRVPFHQMKSGALDQADSRV 187
Query: 191 IFEAIRSRTVL 201
I +A+ + L
Sbjct: 188 IEQALTQKQTL 198
>gi|239998982|ref|ZP_04718906.1| recombination protein RecR [Neisseria gonorrhoeae 35/02]
gi|240016543|ref|ZP_04723083.1| recombination protein RecR [Neisseria gonorrhoeae FA6140]
gi|240080667|ref|ZP_04725210.1| recombination protein RecR [Neisseria gonorrhoeae FA19]
gi|240115722|ref|ZP_04729784.1| recombination protein RecR [Neisseria gonorrhoeae PID18]
gi|240118018|ref|ZP_04732080.1| recombination protein RecR [Neisseria gonorrhoeae PID1]
gi|240125754|ref|ZP_04738640.1| recombination protein RecR [Neisseria gonorrhoeae SK-92-679]
gi|254493774|ref|ZP_05106945.1| recombination protein recR [Neisseria gonorrhoeae 1291]
gi|260440466|ref|ZP_05794282.1| recombination protein RecR [Neisseria gonorrhoeae DGI2]
gi|268594830|ref|ZP_06128997.1| recombination protein recR [Neisseria gonorrhoeae 35/02]
gi|268596789|ref|ZP_06130956.1| recombination protein recR [Neisseria gonorrhoeae FA19]
gi|268599049|ref|ZP_06133216.1| recombination protein recR [Neisseria gonorrhoeae MS11]
gi|268601402|ref|ZP_06135569.1| recombination protein recR [Neisseria gonorrhoeae PID18]
gi|268603731|ref|ZP_06137898.1| recombination protein recR [Neisseria gonorrhoeae PID1]
gi|268682202|ref|ZP_06149064.1| recombination protein recR [Neisseria gonorrhoeae PID332]
gi|268684353|ref|ZP_06151215.1| recombination protein recR [Neisseria gonorrhoeae SK-92-679]
gi|268686674|ref|ZP_06153536.1| recombination protein recR [Neisseria gonorrhoeae SK-93-1035]
gi|291043766|ref|ZP_06569482.1| recombination protein recR [Neisseria gonorrhoeae DGI2]
gi|226512814|gb|EEH62159.1| recombination protein recR [Neisseria gonorrhoeae 1291]
gi|268548219|gb|EEZ43637.1| recombination protein recR [Neisseria gonorrhoeae 35/02]
gi|268550577|gb|EEZ45596.1| recombination protein recR [Neisseria gonorrhoeae FA19]
gi|268583180|gb|EEZ47856.1| recombination protein recR [Neisseria gonorrhoeae MS11]
gi|268585533|gb|EEZ50209.1| recombination protein recR [Neisseria gonorrhoeae PID18]
gi|268587862|gb|EEZ52538.1| recombination protein recR [Neisseria gonorrhoeae PID1]
gi|268622486|gb|EEZ54886.1| recombination protein recR [Neisseria gonorrhoeae PID332]
gi|268624637|gb|EEZ57037.1| recombination protein recR [Neisseria gonorrhoeae SK-92-679]
gi|268626958|gb|EEZ59358.1| recombination protein recR [Neisseria gonorrhoeae SK-93-1035]
gi|291012229|gb|EFE04218.1| recombination protein recR [Neisseria gonorrhoeae DGI2]
Length = 205
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL+++K + L +A+ +V C+ C
Sbjct: 9 FQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVRHCARCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|254671965|emb|CBA04385.1| recombination protein RecR [Neisseria meningitidis alpha275]
Length = 206
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 10 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCAMCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|308389330|gb|ADO31650.1| putative recombination protein [Neisseria meningitidis alpha710]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 10 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCAMCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNMEVANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|325136277|gb|EGC58885.1| recombination protein RecR [Neisseria meningitidis M0579]
gi|325202069|gb|ADY97523.1| recombination protein RecR [Neisseria meningitidis M01-240149]
gi|325208177|gb|ADZ03629.1| recombination protein RecR [Neisseria meningitidis NZ-05/33]
Length = 205
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 9 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCAMCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNMEVANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|325130316|gb|EGC53083.1| recombination protein RecR [Neisseria meningitidis OX99.30304]
Length = 205
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 9 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCAMCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|15604961|ref|NP_219745.1| recombination protein RecR [Chlamydia trachomatis D/UW-3/CX]
gi|76788962|ref|YP_328048.1| recombination protein RecR [Chlamydia trachomatis A/HAR-13]
gi|237802663|ref|YP_002887857.1| recombination protein RecR [Chlamydia trachomatis B/Jali20/OT]
gi|237804585|ref|YP_002888739.1| recombination protein RecR [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311041|ref|ZP_05353611.1| recombination protein RecR [Chlamydia trachomatis 6276]
gi|255317342|ref|ZP_05358588.1| recombination protein RecR [Chlamydia trachomatis 6276s]
gi|6685837|sp|O84243|RECR_CHLTR RecName: Full=Recombination protein recR
gi|123607037|sp|Q3KMC2|RECR_CHLTA RecName: Full=Recombination protein recR
gi|3328650|gb|AAC67833.1| Recombination Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167492|gb|AAX50500.1| RecR [Chlamydia trachomatis A/HAR-13]
gi|231272885|emb|CAX09796.1| recombination protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273897|emb|CAX10689.1| recombination protein [Chlamydia trachomatis B/Jali20/OT]
gi|296435756|gb|ADH17930.1| recombination protein RecR [Chlamydia trachomatis G/9768]
gi|296436680|gb|ADH18850.1| recombination protein RecR [Chlamydia trachomatis G/11222]
gi|296437616|gb|ADH19777.1| recombination protein RecR [Chlamydia trachomatis G/11074]
gi|297140115|gb|ADH96873.1| recombination protein RecR [Chlamydia trachomatis G/9301]
gi|297748370|gb|ADI50916.1| RecR [Chlamydia trachomatis D-EC]
gi|297749250|gb|ADI51928.1| RecR [Chlamydia trachomatis D-LC]
Length = 200
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS--ICGNVD 67
I LI L ++PG G +SA + L++ + +A+A+ CS C +
Sbjct: 8 ISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMAQALQEFSTSHATCSNCFCLKIS 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDI 125
T PC C + RD+S + +V D++ALE+SK Y VLG LSP+ + E +
Sbjct: 68 QTSPCNFC-SESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLSLEKL 126
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G D+
Sbjct: 127 AI--LKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSFDF 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R
Sbjct: 185 VDANTLARAFSGRNCF 200
>gi|283850681|ref|ZP_06367968.1| recombination protein RecR [Desulfovibrio sp. FW1012B]
gi|283573924|gb|EFC21897.1| recombination protein RecR [Desulfovibrio sp. FW1012B]
Length = 204
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L++ LA++PG GP+SA + + L++ L + + + ++CLCS C + T
Sbjct: 13 ELVEQLAKLPGLGPKSALKVAMTLLEWPRSRADSLGDGILRLRERLCLCSRCAGLSETPV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C +C D R + +V + LE + Y VLGG L PL+ + P + + +L
Sbjct: 73 CPVCADPTRRPEELCLVSQWDSVMLLEETAQFGGYYLVLGGLLDPLEGVTPGQLRLDALR 132
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLDDG 189
R+ + E I A+ AT+ ++TA +I + L + V++TRLA GIP+G+E+ Y+D
Sbjct: 133 ARLAEGAVTECILALGATLAAESTASHIKNLLAREFPGVRLTRLAQGIPLGAEVKYVDKE 192
Query: 190 TIFEAIRSR 198
T+ +++R R
Sbjct: 193 TLSQSLRFR 201
>gi|296840852|ref|ZP_06863600.2| recombination protein RecR [Neisseria polysaccharea ATCC 43768]
gi|296839800|gb|EFH23738.1| recombination protein RecR [Neisseria polysaccharea ATCC 43768]
Length = 206
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C+ C
Sbjct: 10 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCARCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|15618219|ref|NP_224504.1| recombination protein RecR [Chlamydophila pneumoniae CWL029]
gi|15835834|ref|NP_300358.1| recombination protein RecR [Chlamydophila pneumoniae J138]
gi|16752740|ref|NP_445007.1| recombination protein RecR [Chlamydophila pneumoniae AR39]
gi|33241643|ref|NP_876584.1| recombination protein RecR [Chlamydophila pneumoniae TW-183]
gi|6685852|sp|Q9Z8N9|RECR_CHLPN RecName: Full=Recombination protein recR
gi|4376575|gb|AAD18448.1| Recombination Protein [Chlamydophila pneumoniae CWL029]
gi|7189381|gb|AAF38296.1| recombination protein RecR [Chlamydophila pneumoniae AR39]
gi|8978673|dbj|BAA98509.1| recombination protein [Chlamydophila pneumoniae J138]
gi|33236152|gb|AAP98241.1| RecR [Chlamydophila pneumoniae TW-183]
gi|269303174|gb|ACZ33274.1| recombination protein RecR [Chlamydophila pneumoniae LPCoLN]
Length = 200
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L ++PG G ++A + L+ + L L A N+ ++ C +C + +
Sbjct: 8 LSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPLCFTLKES 67
Query: 70 DP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C ++RD + +V D++ LERSK YHVLG LSP+ E+ +
Sbjct: 68 KEADCHFC-REERDNQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKHIENERL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L RIE +E+I AI AT+EG TA ++ +L+ V I+RLA G+P+G DY+D
Sbjct: 127 SILKSRIETLCPKEIILAIDATLEGDATALFLKQELQHFSVNISRLALGLPIGLSFDYVD 186
Query: 188 DGTIFEAIRSR 198
GT+ A R
Sbjct: 187 SGTLARAFSGR 197
>gi|171920724|ref|ZP_02931938.1| recombination protein RecR [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|171903469|gb|EDT49758.1| recombination protein RecR [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
Length = 201
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E E L+ L +PG G ++A++ L+++ ++ + + + + + C C N
Sbjct: 6 EFEMLVDALKSLPGVGTKNAKKWAFFLLQQDQKYIDDFIKRIKDAKTNIIKCKYCSNFGN 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + RD + +++V DL +E + N LYH+ G +S + E I+
Sbjct: 66 KDECDICSNDYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEVSLRKNVVIEHTNIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187
+ ER+ +E+I A S T +G+ TA YI+ L+ I +++I R+ +GIP+ S +DY D
Sbjct: 126 IIKERVLNGSFKEIIIATSYTHDGEVTADYIVKMLEDIKNIQIYRIGFGIPLNSSIDYAD 185
Query: 188 DGTIFEAIRSR 198
D T+ ++I ++
Sbjct: 186 DETLKQSIANK 196
>gi|15606640|ref|NP_214020.1| recombination protein RecR [Aquifex aeolicus VF5]
gi|6093946|sp|O67455|RECR_AQUAE RecName: Full=Recombination protein recR
gi|2983863|gb|AAC07416.1| recombination protein RecR [Aquifex aeolicus VF5]
Length = 211
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 112/193 (58%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++ ++ + IP +G R A R +L+K +++ + E + + C C +
Sbjct: 18 KSLKEALEGIKEIPTYGERGASRFMYNLLKLEKEKRKEIIEKVLEAVEVLRPCRECFLIT 77
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R I VVE+ D +A+E+ + +YHVL G ++PL+ I ED+ I
Sbjct: 78 DREVCPICSDEKRSKKFICVVEESQDAYAIEKLERYKGVYHVLQGHIAPLEGISAEDLTI 137
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYI--MDKLKGIDVKITRLAYGIPMGSELDY 185
+L+ERI+ + +E+I A + +EG+ TA+YI + + K VKITR AYG GS +++
Sbjct: 138 DALMERIKKYQPKEVILATNPNVEGEATANYIAGLIRRKFPAVKITRTAYGFQFGSLIEF 197
Query: 186 LDDGTIFEAIRSR 198
+D+ ++ +++ +R
Sbjct: 198 VDEYSLEKSMENR 210
>gi|269214881|ref|ZP_05987334.2| recombination protein RecR [Neisseria lactamica ATCC 23970]
gi|269208788|gb|EEZ75243.1| recombination protein RecR [Neisseria lactamica ATCC 23970]
gi|319410486|emb|CBY90847.1| recombination protein RecR [Neisseria meningitidis WUE 2594]
Length = 206
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C+ C
Sbjct: 10 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCARCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|218768239|ref|YP_002342751.1| recombination protein RecR [Neisseria meningitidis Z2491]
gi|20139753|sp|Q9JUB6|RECR_NEIMA RecName: Full=Recombination protein recR
gi|121052247|emb|CAM08572.1| putative recombination protein [Neisseria meningitidis Z2491]
gi|309378620|emb|CBX22798.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 205
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V C+ C
Sbjct: 9 FQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCARCNTFCEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 69 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 129 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 188
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 189 TLAQAVYERRLI 200
>gi|257484837|ref|ZP_05638878.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 160
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 46 LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNA 105
LA A+ + V C C + + C C D +RD +++ VVE D++A+E++
Sbjct: 3 LALALGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRG 61
Query: 106 LYHVLGGSLSPLDRIGPEDIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLK 164
Y VL G LSPLD +GPE IGI L+ERI + E+I A + T+EG+ TAHYI L
Sbjct: 62 RYFVLKGHLSPLDGLGPEAIGIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLH 121
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +R+A+G+P+G ELD +D GT+ + R
Sbjct: 122 EKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGR 155
>gi|304387501|ref|ZP_07369690.1| recombination protein R [Neisseria meningitidis ATCC 13091]
gi|304338388|gb|EFM04509.1| recombination protein R [Neisseria meningitidis ATCC 13091]
Length = 206
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+ A+R HL++ K + L +A+ +V C++C
Sbjct: 10 FQGLIDALKVLPNVGPKLAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHCAMCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDR 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D G
Sbjct: 130 LAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|296438547|gb|ADH20700.1| recombination protein RecR [Chlamydia trachomatis E/11023]
Length = 200
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS--ICGNVD 67
I LI L ++PG G +SA + L++ + +A A+ CS C +
Sbjct: 8 ISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMALALQEFSTSHATCSNCFCLKIS 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDI 125
T PC C + RD+S + +V D++ALE+SK Y VLG LSP+ + E +
Sbjct: 68 QTSPCNFC-SESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLSLEKL 126
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G D+
Sbjct: 127 AI--LKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSFDF 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R
Sbjct: 185 VDANTLARAFSGRNCF 200
>gi|166154451|ref|YP_001654569.1| recombination protein RecR [Chlamydia trachomatis 434/Bu]
gi|166155326|ref|YP_001653581.1| recombination protein RecR [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|255348598|ref|ZP_05380605.1| recombination protein RecR [Chlamydia trachomatis 70]
gi|255503138|ref|ZP_05381528.1| recombination protein RecR [Chlamydia trachomatis 70s]
gi|255506816|ref|ZP_05382455.1| recombination protein RecR [Chlamydia trachomatis D(s)2923]
gi|301335710|ref|ZP_07223954.1| recombination protein RecR [Chlamydia trachomatis L2tet1]
gi|229890140|sp|B0B7F6|RECR_CHLT2 RecName: Full=Recombination protein recR
gi|229890142|sp|B0BBM1|RECR_CHLTB RecName: Full=Recombination protein recR
gi|165930439|emb|CAP03932.1| recombination protein [Chlamydia trachomatis 434/Bu]
gi|165931314|emb|CAP06886.1| recombination protein [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|289525279|emb|CBJ14755.1| recombination protein [Chlamydia trachomatis Sweden2]
gi|296434827|gb|ADH17005.1| recombination protein RecR [Chlamydia trachomatis E/150]
Length = 200
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS--ICGNVD 67
I LI L ++PG G +SA + L++ + +A A+ CS C +
Sbjct: 8 ISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMALALQEFSTSHATCSNCFCLKIS 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDI 125
T PC C + RD+S + +V D++ALE+SK Y VLG LSP+ + E +
Sbjct: 68 QTSPCNFC-SESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLSLEKL 126
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G D+
Sbjct: 127 AI--LKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSFDF 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R
Sbjct: 185 VDANTLARAFSGRNCF 200
>gi|239907165|ref|YP_002953906.1| recombination protein RecR [Desulfovibrio magneticus RS-1]
gi|239797031|dbj|BAH76020.1| recombination protein RecR [Desulfovibrio magneticus RS-1]
Length = 204
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 104/191 (54%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L+ LA++PG GP+SA + + L++ L EA+ + ++CLC C ++ T
Sbjct: 11 LAELVDQLAKLPGLGPKSALKVAMTLLEWPRPRADGLGEAILRLRERLCLCVHCASLSET 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D R+ + +V + +E + Y VLGG L PL+ + P + +
Sbjct: 71 PVCPVCADPSRNGEQLCLVAQWDAIMQMEETGLYAGRYLVLGGLLDPLEGVSPGQLRLDV 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDYLD 187
L ++ + E I A+ AT+ +TTA +I + L+ V++TRLA GIP+G+E+ Y+D
Sbjct: 131 LRAKLAEGAVTECILALGATLAAETTASHIKNLLEREFPAVRLTRLAQGIPLGAEVKYVD 190
Query: 188 DGTIFEAIRSR 198
T+ +++R R
Sbjct: 191 KETLSQSLRYR 201
>gi|149193701|ref|ZP_01870799.1| recombination protein RecR [Caminibacter mediatlanticus TB-2]
gi|149135654|gb|EDM24132.1| recombination protein RecR [Caminibacter mediatlanticus TB-2]
Length = 189
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I+NLI+IL +P G +SA R L L K K + L LA A+ + +KV C CGN
Sbjct: 5 KSIQNLIEILEELPSIGKKSATRLALSLAKDKFKALK-LANAIEEVVSKVSECKECGNFS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD ++ IV E D+ +E S N Y VL LD D +
Sbjct: 64 EHEICEICDNPNRDKTLAIV-ETPKDIMIIEESGVYNGYYFVLNH----LD-----DENL 113
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q + E I+ K I+E+IFA +IE + Y+ DKLK ++V+ +++A G+P G + +D
Sbjct: 114 QKIREIIKNKNIKEIIFAFPPSIESEARCLYLEDKLKDLEVEFSQIAQGVPTGVHFENVD 173
Query: 188 DGTIFEAIRSR 198
++ +AI+ R
Sbjct: 174 INSLAKAIKLR 184
>gi|119953251|ref|YP_945460.1| recombination protein RecR [Borrelia turicatae 91E135]
gi|119862022|gb|AAX17790.1| recombination protein RecR [Borrelia turicatae 91E135]
Length = 194
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI +L+++PG G ++A R ++ E+ L + + ++ + C C N+
Sbjct: 3 IQDLIVLLSKLPGIGRKTAVRMVYDILYNGEEYSRALGQILIGFHSSIRKCKNCHNLAEG 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+D R +I +VE DL +E ++ + LY VL G L PL IGP + +
Sbjct: 63 EFCNICMDLSRCKDMICIVEMPQDLEVIESTREYDGLYFVLHGHLDPLRDIGPNRLNLDK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + +E+I A +IEG TA+YI LK + + +TR+A G+P G + D
Sbjct: 123 LENYVREVGAQEVIIATEFSIEGDVTANYISGILKNLGINVTRIASGLPAGGSISNADKI 182
Query: 190 TIFEAIRSR 198
T A+R R
Sbjct: 183 TTLRALRLR 191
>gi|33322897|gb|AAQ07185.1|AF496493_1 recombination protein M [Lactobacillus delbrueckii subsp. lactis]
Length = 131
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 77/126 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN+
Sbjct: 6 IARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGNITEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I I+S
Sbjct: 66 DPCAICSNPARDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQINIKS 125
Query: 130 LIERIE 135
LI R++
Sbjct: 126 LIVRLQ 131
>gi|330940612|gb|EGH43654.1| recombination protein RecR [Pseudomonas syringae pv. pisi str.
1704B]
Length = 154
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHV 109
M + V C C + + C C D +RD +++ VVE D++A+E++ Y V
Sbjct: 1 MGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFV 59
Query: 110 LGGSLSPLDRIGPEDIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDV 168
L G LSPLD +GPE IGI L+ER+ + E+I A + T+EG+ TAHYI L +
Sbjct: 60 LKGHLSPLDGLGPEAIGIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGL 119
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+R+A+G+P+G ELD +D GT+ + R
Sbjct: 120 VASRIAHGVPLGGELDLVDGGTLAHSFAGR 149
>gi|195952624|ref|YP_002120914.1| recombination protein RecR [Hydrogenobaculum sp. Y04AAS1]
gi|195932236|gb|ACG56936.1| recombination protein RecR [Hydrogenobaculum sp. Y04AAS1]
Length = 223
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 36/218 (16%)
Query: 12 NLIKIL---ARIPGFGPRSARRATLHLVK----KKEQLLGPLAEAMANIYNKVCLCSICG 64
NL+K L IPG+G ++A R +K KKE ++ +++ N+++ + C C
Sbjct: 10 NLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIV----KSLENLFS-ITTCKECN 64
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + CAIC + +R I VVE+ D + +E+ + +YH+LGG +SPL+ I PED
Sbjct: 65 ILTDQEVCAICSNPKRSKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPED 124
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID----------------- 167
+ I+ L ERI +E+I A + EG+ TA+Y++ +K ++
Sbjct: 125 LSIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSMPRTT 184
Query: 168 -------VKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITR+A I G+ ++Y+DD ++ E+I R
Sbjct: 185 SLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKR 222
>gi|262393660|ref|YP_003285514.1| recombination protein RecR [Vibrio sp. Ex25]
gi|262337254|gb|ACY51049.1| recombination protein RecR [Vibrio sp. Ex25]
Length = 172
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR-DASVIIVVEDV 91
HL+++ + LA+A++ ++ C+ C + C IC + +R + I VVE
Sbjct: 3 FHLLQRDRKGGLQLADALSQAMTEIGHCTECRTFTEEEVCHICTNPKRQENGQICVVESP 62
Query: 92 ADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIE 151
AD+ A+E + + Y VL G LSPLD IGP DIG+ L R+ I E+I A + T+E
Sbjct: 63 ADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDIAEVILATNPTVE 122
Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
G+ TAHYI + K V +R+A+G+P+G EL+ +D T+ ++ R
Sbjct: 123 GEATAHYIAELCKEHQVDASRIAHGVPVGGELELVDGTTLSHSLLGR 169
>gi|89898331|ref|YP_515441.1| recombination protein RecR [Chlamydophila felis Fe/C-56]
gi|123483333|sp|Q254J2|RECR_CHLFF RecName: Full=Recombination protein recR
gi|89331703|dbj|BAE81296.1| recombination and repair [Chlamydophila felis Fe/C-56]
Length = 200
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMA--NIYNKVCLCSICGNVD 67
+ LI L ++PG G ++A + L+ ++ L L +A + +I C C C
Sbjct: 8 LSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPCCFCLKNF 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C RD S + +V D+++LERS+ Y+VLG LSPL E+ +
Sbjct: 68 PESQCEFC-QNNRDTSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKHIEEERM 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L +RIE +E+I A+ AT+EG TA ++ +L I+RLA G+P+G DY+D
Sbjct: 127 RLLKQRIEFLNPKEIILALDATLEGDATALFLKQELAYSLASISRLALGLPIGLSFDYID 186
Query: 188 DGTIFEAIRSRT 199
GT+ A R
Sbjct: 187 SGTLARAFSGRN 198
>gi|269213985|ref|ZP_05983321.2| recombination protein RecR [Neisseria cinerea ATCC 14685]
gi|269144904|gb|EEZ71322.1| recombination protein RecR [Neisseria cinerea ATCC 14685]
Length = 206
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L +P GP+SA+R HL++ K + L +A+ +V CS+C
Sbjct: 10 FQRLIGALKVLPNVGPKSAQRIAYHLLQHKRKEAEELVDALQTALRQVDHCSMCNTFCEG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C+IC D RD +++V AD+ +E + + LY VL G ++ + I +
Sbjct: 70 GLCSICADPSRDVRKLMIVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDK 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ER++ ++I E+I A + T EG TA + + K + KI+RL+ GIP+G EL+Y+D G
Sbjct: 130 LAERLKKEEIEEIIIATAFTAEGNATAFVLSEFFKKLPYKISRLSQGIPLGGELEYVDAG 189
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R ++
Sbjct: 190 TLAQAVYERRLI 201
>gi|29840243|ref|NP_829349.1| recombination protein RecR [Chlamydophila caviae GPIC]
gi|33301498|sp|Q823D7|RECR_CHLCV RecName: Full=Recombination protein recR
gi|29834591|gb|AAP05227.1| recombination protein RecR [Chlamydophila caviae GPIC]
Length = 200
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC---GNV 66
+ LI +L ++PG G ++A + L+ + L + +A + + CS C N+
Sbjct: 8 LSKLISLLRKLPGIGFKTAEKLAFELLDWDQDQLEAMGQAFSEVSAARSHCSTCFCLKNL 67
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPED 124
++ C C RD S + +V D+++LERS+ Y+VLG LSP+ I E
Sbjct: 68 PESN-CEFC-QNNRDTSTLCIVATPKDIFSLERSQIFKGHYYVLGTLLSPITGKHIDVER 125
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +RIE K +E+I A+ AT+EG TA ++ +L I+RLA G+P+G D
Sbjct: 126 IGL--LKQRIEFLKPQEIILALDATLEGDATALFLKQELAFSSASISRLALGLPIGLSFD 183
Query: 185 YLDDGTIFEAIRSRT 199
Y+D GT+ A R
Sbjct: 184 YVDSGTLARAFSGRN 198
>gi|6093947|sp|O30823|RECR_HAEDU RecName: Full=Recombination protein recR
gi|2407232|gb|AAC46216.1| recombinational DNA repair protein [Haemophilus ducreyi]
Length = 174
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 34 HLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDAS-VIIVVEDVA 92
HL+++ LA+A+ + C+ C + C IC + +R S + +VE
Sbjct: 4 HLLQRNRNGGLNLAKALNEAMTHIGHCNACRTFTEEEECTICKNPRRQISGQLCIVEMPE 63
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
D+ A+E++ + Y VL G LSPLD IGP +IG+ L +R+E + E+I A + TIEG
Sbjct: 64 DIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQQRLEQESFHEIILATNPTIEG 123
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
TA+YI + +VK+TR+A+GIP+G L+ +D T+ + R
Sbjct: 124 DATANYIAEICHLYNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGR 169
>gi|329942834|ref|ZP_08291613.1| recombination protein RecR [Chlamydophila psittaci Cal10]
gi|332287427|ref|YP_004422328.1| recombination protein RecR [Chlamydophila psittaci 6BC]
gi|313848007|emb|CBY17004.1| recombination protein [Chlamydophila psittaci RD1]
gi|325506466|gb|ADZ18104.1| recombination protein RecR [Chlamydophila psittaci 6BC]
gi|328815094|gb|EGF85083.1| recombination protein RecR [Chlamydophila psittaci Cal10]
gi|328914675|gb|AEB55508.1| recombination protein RecR [Chlamydophila psittaci 6BC]
Length = 200
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L ++PG G ++A + L+ + L + +A + + C C + +
Sbjct: 8 LSKLISFLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSELSAARSHCPTCFCLKSH 67
Query: 70 DP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+ C RD S++ +V D++ALERS+ Y+VLG LSP+ + +
Sbjct: 68 PESLCSFC-QNNRDTSILCIVATPKDIFALERSQIFKGHYYVLGALLSPITGKHIDAERM 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +RIE K +E+I A+ AT+EG TA ++ +L + I+RLA G+P+G DY+D
Sbjct: 127 HLLKQRIEFLKPKEIILALDATLEGDATALFLKQELSHSSISISRLALGLPIGLSFDYID 186
Query: 188 DGTIFEAIRSRT 199
GT+ A R
Sbjct: 187 SGTLARAFSGRN 198
>gi|330960249|gb|EGH60509.1| recombination protein RecR [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 170
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 46 LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNA 105
LA A+ + V C C + + C C D +RD +++ VVE D++A+E++
Sbjct: 14 LALALGQAMDGVGHCRSCRTLTEEEFCPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRG 72
Query: 106 LYHVLGGSLSPLDRIGPEDIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLK 164
Y VL G LSPLD +GP+ IGI L+ERI + E+I A +A +EG+ TAHYI L
Sbjct: 73 RYFVLKGHLSPLDGLGPDAIGIPQLMERIAQQGTFTEVILATNA-VEGEATAHYIAQLLN 131
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +R+A+G+P+G ELD +D GT+ + R
Sbjct: 132 DKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGR 165
>gi|256384237|gb|ACU78807.1| DNA repair protein RecM [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256385070|gb|ACU79639.1| DNA repair protein RecM [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455620|gb|ADH21855.1| DNA repair protein RecM [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 196
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
G +++ R + L+ K++L + + + C ICG + D C +C + R
Sbjct: 17 QGLTKKTSERLLVDLLINKDKL-DQFIDQLNKAKQLISTCKICGYLSENDKCLVCSLENR 75
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIR 140
+ ++I +V + D +E + +YH+L G ++ I + + I S+ +RI
Sbjct: 76 NQNIICIVSTILDAKNIENTNKYKGVYHILNGEINLNKNITLDKLNISSIFKRINDN--T 133
Query: 141 ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LDY+D+ T+ A +R
Sbjct: 134 EIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLDYMDEFTLQSAFLNR 191
>gi|172041590|ref|YP_001801304.1| recombination protein RecR [Corynebacterium urealyticum DSM 7109]
gi|171852894|emb|CAQ05870.1| recombination protein [Corynebacterium urealyticum DSM 7109]
Length = 273
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKE-QLLGPLAEAMANIYNKVCLCSICGNVDT 68
++++I A +PG GP+SA+R LHL++ + + + N+++ V C IC N+
Sbjct: 6 LQDVIDEFASLPGIGPKSAQRIALHLLENATGEDIERFQATLGNLHSGVAFCRICHNISQ 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC D RDAS++ VVE+ D+ +ER+ YHVLGG+L PL+ +GP ++ +
Sbjct: 66 EDVCRICADSSRDASLVCVVEEPKDIQVIERTGEYRGRYHVLGGALDPLNGVGPGELNVT 125
Query: 129 SLIERI 134
+L++RI
Sbjct: 126 ALVQRI 131
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDG 189
+E E +I E+I A EG+ TA Y+ LK + ++RLA GIPMG +L+++D+
Sbjct: 200 VEYREAPEITEVIIATDPNTEGEATASYLGRLLKEFPGLTVSRLASGIPMGGDLEFVDEL 259
Query: 190 TIFEAIRSRTVL 201
T+ A RT L
Sbjct: 260 TLSRAFAGRTQL 271
>gi|330876081|gb|EGH10230.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 137
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI L+
Sbjct: 6 CPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQLM 64
Query: 132 ERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D GT
Sbjct: 65 ERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHGVPLGGELDLVDGGT 124
Query: 191 IFEAIRSR 198
+ + R
Sbjct: 125 LAHSFAGR 132
>gi|146321217|ref|YP_001200928.1| recombinational DNA repair protein (RecF pathway) [Streptococcus
suis 98HAH33]
gi|145692023|gb|ABP92528.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus
suis 98HAH33]
Length = 135
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + ++ ++ A+ + + CSICGN+
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICGNLTDQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+DI +++
Sbjct: 67 DPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDDINLKT 126
Query: 130 LIERI 134
L+ R+
Sbjct: 127 LLTRL 131
>gi|296273166|ref|YP_003655797.1| recombination protein RecR [Arcobacter nitrofigilis DSM 7299]
gi|296097340|gb|ADG93290.1| recombination protein RecR [Arcobacter nitrofigilis DSM 7299]
Length = 190
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
+L++ +P G +SA+R H++ +A ++ N + CS CG + +
Sbjct: 10 DLVEAFENLPTIGKKSAQRLAYHIIMNDNYCGIKIAHSIENALKSIRKCSKCGCMSEHEI 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC+D +R++S I VV+ D++ +E SK N Y V +S LD +I + I
Sbjct: 70 CEICLDDERESSFICVVQSAKDIFTIEESKQFNGKYFV----ISHLD-----EIVLDQFI 120
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
I+ K+++++FAIS ++ +I DKLK D+ T++A G+P G L+ +D ++
Sbjct: 121 TYIKTNKVKDILFAISPSLSNDAFILFIEDKLKEFDINFTKIAQGVPTGVSLENVDILSL 180
Query: 192 FEAIRSRTVL 201
+AI+S+ ++
Sbjct: 181 AKAIQSKVLI 190
>gi|289678893|ref|ZP_06499783.1| recombination protein RecR [Pseudomonas syringae pv. syringae FF5]
Length = 138
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IGI L+
Sbjct: 7 CPQCADPRRDDTLLCVVEGPTDVYAVEQT-GYRGRYFVLKGHLSPLDGLGPEAIGIPQLM 65
Query: 132 ERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
ER+ + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD +D GT
Sbjct: 66 ERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELDLVDGGT 125
Query: 191 IFEAIRSR 198
+ + R
Sbjct: 126 LAHSFAGR 133
>gi|62185098|ref|YP_219883.1| recombination protein RecR [Chlamydophila abortus S26/3]
gi|73621477|sp|Q5L609|RECR_CHLAB RecName: Full=Recombination protein recR
gi|62148165|emb|CAH63922.1| recombination protein [Chlamydophila abortus S26/3]
Length = 200
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI +L ++PG G ++A + L+ + L + +A + + C C + +
Sbjct: 8 LSKLISLLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSELSAARSHCPTCFCLKSH 67
Query: 70 DP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+ C RD S++ +V D+++LERS+ Y+VLG LSP+ + +
Sbjct: 68 PESVCSFC-QNNRDTSILCIVATPKDIFSLERSQIFQGHYYVLGALLSPITGRHIDAERM 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +RIE K +E+I A+ AT+EG TA ++ +L ++RLA G+P+G DY+D
Sbjct: 127 HLLKQRIEFLKPKEIILALDATLEGDATALFLKQELSHSSASVSRLALGLPIGLSFDYID 186
Query: 188 DGTIFEAIRSRT 199
GT+ A R
Sbjct: 187 SGTLARAFSGRN 198
>gi|313664898|ref|YP_004046769.1| recombination protein RecR [Mycoplasma leachii PG50]
gi|312950058|gb|ADR24654.1| putative recombination protein RecR [Mycoplasma leachii PG50]
Length = 196
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD 81
G +++ R ++L+ K++L + + + C ICG + + C +C R+
Sbjct: 18 GLTKKTSERLLVNLLLNKDKL-NEFINQLNKVSQLISTCKICGYLSENEKCLVCSLDNRN 76
Query: 82 ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRE 141
++I +V + D +E + +YH+L G ++ I + + I S+ +R V E
Sbjct: 77 QNIICIVSTILDAKNIETANKYKGVYHILNGEINLNKNITFDKLNISSIFKR--VNDNTE 134
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+I A+++T EG+ TA+Y+ L +VKITRLA G+PMG+ LDY+D+ T+ A +R
Sbjct: 135 IILALNSTFEGELTANYLYKLLSTKNVKITRLAKGMPMGASLDYMDEFTLQSAFINR 191
>gi|260654559|ref|ZP_05860049.1| recombination protein RecR [Jonquetella anthropi E3_33 E1]
gi|260630575|gb|EEX48769.1| recombination protein RecR [Jonquetella anthropi E3_33 E1]
Length = 175
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
++++ + +A+A+ + V CS CGN+ T PC IC D R+ ++ VVE +
Sbjct: 3 FFVLQQPQSYAKDMADALNALKRDVATCSRCGNLTVTQPCPICSDPMRNRHLLCVVESLE 62
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIG--PEDIGIQSLIERIEVKKIRELIFAISATI 150
DL ++E S N LY L S+SP+D P D+ I+ L I + I E+I A + +
Sbjct: 63 DLTSIELSGLFNGLYFNLATSVSPMDDRENIPPDV-IERLRALIAQEPIEEIIIATNPRV 121
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
EG T + ++D L + V +RLAYG+P+G +++ D T+ A+ SR
Sbjct: 122 EGDMTFYALLDALADLPVTKSRLAYGLPVGGSIEFADRVTLHAALESR 169
>gi|83319376|ref|YP_424008.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|83283262|gb|ABC01194.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 196
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD 81
G +++ R ++L+ K++L + + + C ICG + + C +C R+
Sbjct: 18 GLTKKTSERLLVNLLLNKDKL-DEFINQLNKVNQLISTCKICGYLSENNKCLVCSLDNRN 76
Query: 82 ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRE 141
+ I +V + D +E + +YH+L G ++ I + + I S+ +RI E
Sbjct: 77 QNTICIVSTILDAKNIENANKYKGVYHILNGEINLNKNITFDKLNISSIFKRINDD--TE 134
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LDY+D+ T+ A +R
Sbjct: 135 IILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLDYMDEFTLQSAFINR 191
>gi|331703063|ref|YP_004399750.1| Recombination protein [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328801618|emb|CBW53771.1| Recombination protein [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 199
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
G +++ R + L+ K++L + + + C ICG + + C +C R
Sbjct: 20 QGLTKKTSERLLVDLLINKDKL-DQFIDQLNKAKQLISTCKICGYLSENNKCLVCSLDNR 78
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIR 140
+ + I +V + D +E + +YH+L G ++ I + + I S+ +RI
Sbjct: 79 NQNTICIVSTILDAKNIENTNKYKGVYHILNGEINLNKNITFDKLNISSIFKRINDN--T 136
Query: 141 ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LDY+D+ T+ A +R
Sbjct: 137 EIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLDYMDEFTLQSAFLNR 194
>gi|270285301|ref|ZP_06194695.1| recombination protein RecR [Chlamydia muridarum Nigg]
gi|270289318|ref|ZP_06195620.1| recombination protein RecR [Chlamydia muridarum Weiss]
gi|301336698|ref|ZP_07224900.1| recombination protein RecR [Chlamydia muridarum MopnTet14]
gi|13878697|sp|Q9PKF4|RECR_CHLMU RecName: Full=Recombination protein recR
Length = 200
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
I LI L ++PG G +SA + L++ + + AM C C + T
Sbjct: 8 ISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFCLKTS 67
Query: 69 -TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDI 125
T C C + RD+S + +V D+++ E+SK Y VLG LSP+ + E +
Sbjct: 68 KTSSCDFC-SESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLSLEKL 126
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G D+
Sbjct: 127 NI--LKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMPVGLSFDF 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R
Sbjct: 185 IDSNTLARAFSGRNCF 200
>gi|284931633|gb|ADC31571.1| Recombination protein recR [Mycoplasma gallisepticum str. F]
Length = 206
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 106/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M I E NL++ ++ +P + A++ T +L+ K ++ + + + + + +C
Sbjct: 1 MASDIDLNEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDMIDVLKRAKLSIKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C C+IC D+ R+ + + +V DL +E S+A + Y +L +S ++
Sbjct: 61 EMCQGWSNRSICSICSDESRNKNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKR 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E+I L++ I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P
Sbjct: 121 IIEEINFDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S +DY D ++ A ++ ++
Sbjct: 181 SSIDYADSFSLKGAFENKQLI 201
>gi|15835129|ref|NP_296888.1| recombination protein RecR [Chlamydia muridarum Nigg]
gi|7190550|gb|AAF39353.1| recombination protein RecR [Chlamydia muridarum Nigg]
Length = 203
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
I LI L ++PG G +SA + L++ + + AM C C + T
Sbjct: 11 ISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFCLKTS 70
Query: 69 -TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDI 125
T C C + RD+S + +V D+++ E+SK Y VLG LSP+ + E +
Sbjct: 71 KTSSCDFC-SESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLSLEKL 129
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G D+
Sbjct: 130 NI--LKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMPVGLSFDF 187
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R
Sbjct: 188 IDSNTLARAFSGRNCF 203
>gi|224372958|ref|YP_002607330.1| recombination protein RecR [Nautilia profundicola AmH]
gi|223589618|gb|ACM93354.1| recombination protein RecR [Nautilia profundicola AmH]
Length = 187
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ +P G +SA R L + K K + L L A+ ++ + C ICGN
Sbjct: 7 INRLIEAFEELPSIGKKSATRLALSIAKDKFKAL-KLINAIEDVVANIKECEICGNFSEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD ++ IV E+ D+ +E S + N Y VL + +D D IQ
Sbjct: 66 EICDICASENRDKTLAIV-ENSKDIMIIEESGSYNGYYFVL----THID-----DEVIQK 115
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L E I+ K+I+E+IFA ++E + + YI DKLK ++++ T++A G+P G + +D
Sbjct: 116 LREIIKDKEIKEVIFAFPPSVESEARSLYIEDKLKDLNIEFTQIAQGVPTGVHFENVDVN 175
Query: 190 TIFEAIRSRTVL 201
++ +AI+ R L
Sbjct: 176 SLAKAIKLRFKL 187
>gi|294660557|ref|NP_853381.2| Recombination protein RecR [Mycoplasma gallisepticum str. R(low)]
gi|284812220|gb|AAP56949.2| Recombination protein recR [Mycoplasma gallisepticum str. R(low)]
gi|284930877|gb|ADC30816.1| Recombination protein recR [Mycoplasma gallisepticum str. R(high)]
Length = 206
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 104/193 (53%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E NL++ ++ +P + A++ T +L+ K ++ + L + + + +C +C
Sbjct: 9 EFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDLIDVLKRAKLSIKICEMCQGWSN 68
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C+IC D+ R+ + + +V DL +E S+A + Y +L +S ++ E+I
Sbjct: 69 RSICSICSDESRNNNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKRIIEEINFD 128
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++ I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P S +DY D
Sbjct: 129 LLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYADS 188
Query: 189 GTIFEAIRSRTVL 201
++ A ++ ++
Sbjct: 189 FSLKGAFENKQLI 201
>gi|330444498|ref|YP_004377484.1| recombination protein RecR [Chlamydophila pecorum E58]
gi|328807608|gb|AEB41781.1| recombination protein RecR [Chlamydophila pecorum E58]
Length = 220
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS--ICGNVD 67
+ L+ L R+PG G ++A + L+ E+ L L CS C
Sbjct: 26 LSQLVSFLKRLPGIGFKTAEKLAFELLSWDEEQLKALGNVFYETAAARSFCSQCFCLKES 85
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL--DRIGPEDI 125
+ C C RD S + +V D++ LERSK Y+ LG LSP+ I P+ +
Sbjct: 86 SLTQCEFC-SSTRDTSTLCIVASQKDVFFLERSKVFKGRYYTLGSQLSPMTGQHIPPQRV 144
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAYGIPMGSEL 183
+L I+V +E+I A+ AT+EG TA ++ +L+G I+RLA G+P+G
Sbjct: 145 A--ALKHYIQVLSPKEIILALDATLEGDATALFLKQELEGASFSGSISRLALGLPVGLSF 202
Query: 184 DYLDDGTIFEAIRSRTV 200
DY+D T+ A R++
Sbjct: 203 DYVDVSTLSRAFSGRSL 219
>gi|110003915|emb|CAK98255.1| putative recombination protein recr dna repair [Spiroplasma citri]
Length = 174
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
L I G G ++A R L+ K LL L I N C IC + + C C
Sbjct: 3 LKTILGVGKKTAERIFNKLIIKPS-LLQTLEHVFNEIKNNYHQCPICSTLMQNNVCLFCH 61
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ RD + + VV + D+ +E +K N +YHVL G ++ + I P+ + L R+
Sbjct: 62 NDLRDQTKLCVVSNFFDIIKIEATKVFNGVYHVLNGEINVKNGITPDKMTFPVLESRMND 121
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
K I+E+I A+ AT EG+ TA Y+ L+ D+KI+RLA GIP
Sbjct: 122 KIIKEVIIAVGATFEGEVTAQYLKTFLQSFDIKISRLAQGIP 163
>gi|308190300|ref|YP_003923231.1| recombinational DNA repair protein [Mycoplasma fermentans JER]
gi|319777694|ref|YP_004137345.1| recombination protein recr [Mycoplasma fermentans M64]
gi|238810243|dbj|BAH70033.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|307625042|gb|ADN69347.1| recombinational DNA repair protein [Mycoplasma fermentans JER]
gi|318038769|gb|ADV34968.1| Recombination protein RecR [Mycoplasma fermentans M64]
Length = 196
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE L ++L IPG + A + + +K+ ++ + L +++ ++ + CSIC +
Sbjct: 6 IEKLNQVLTTIPGISKKQADKMSNFFLKQDQEYIDNLVKSINDLKTNISYCSICNFLKEG 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D+ R + +++VE+ A L ++ N Y+VL + + ++ +
Sbjct: 66 GKCLVCDDKSR-YNFLMIVENAATLRKIDDMNFYNGYYYVLPYLFNLKNNKEIKNYDYKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPMGSELDYLDD 188
LI I+ KK E+I +S ++EG+ T +++ + +K+TR A G+PMGS L+YLD
Sbjct: 125 LINYIQHKKFDEVIIVLSPSLEGEMTTGHLLKLINSQFKIKVTRAAIGMPMGSNLEYLDT 184
Query: 189 GTIFEAIRSRT 199
TI ++I +R
Sbjct: 185 FTIKQSIENRN 195
>gi|254360628|ref|ZP_04976777.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
gi|153091168|gb|EDN73173.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
Length = 147
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 60 CSICGNVDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
C C + C IC + +R S + VVE D+ A+E++ + Y VL G LSP+D
Sbjct: 3 CKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPID 62
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
IGP +IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P
Sbjct: 63 GIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEMCRMYNVKATRIAHGVP 122
Query: 179 MGSELDYLDDGTIFEAIRSR 198
+G L+ +D T+ + R
Sbjct: 123 VGGSLEMVDGTTLSHSFAGR 142
>gi|256004181|ref|ZP_05429165.1| Zinc finger C4-type, RecR [Clostridium thermocellum DSM 2360]
gi|255991929|gb|EEU02027.1| Zinc finger C4-type, RecR [Clostridium thermocellum DSM 2360]
Length = 122
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI+ ++PG G ++A+R +++ ++ + LA A+ K CS+CGN+ T
Sbjct: 8 IARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSVCGNLTDT 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C +C ++RD+SVI VVED D+ A+E+ + LYHVL G++SP+ IGPED
Sbjct: 68 DVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPED 122
>gi|313678823|ref|YP_004056563.1| recombination protein RecR [Mycoplasma bovis PG45]
gi|312950566|gb|ADR25161.1| putative recombination protein RecR [Mycoplasma bovis PG45]
Length = 195
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I L K L IP + A + + +++K ++ + E + +K+ C C +
Sbjct: 4 KTINELTKKLISIPTITKKQAEKLSDYILKASKEEISSTLEFILEAKDKIGFCEKCNFIV 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C D+ + +I+VE VA + + + N ++VL LS + + D
Sbjct: 64 ENGKCVNC-DRFNLWNTLIIVESVASVKKIFDTDFYNGYFYVLPYLLSVVPKDAKIDFNY 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L++ I++K+I E+I +S TIEGQ T +M + IDVK TR A G+P+ S ++Y+D
Sbjct: 123 EHLVKFIKLKRINEVIIVLSPTIEGQMTTAQLMQICREIDVKATRAAVGLPLNSNIEYID 182
Query: 188 DGTIFEAIRSRT 199
+ TI +AI +RT
Sbjct: 183 EFTIKQAIENRT 194
>gi|148377948|ref|YP_001256824.1| recombination protein RecR [Mycoplasma agalactiae PG2]
gi|148291994|emb|CAL59386.1| Recombination protein RecR [Mycoplasma agalactiae PG2]
Length = 195
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I+ L K L IP + A + +++K + + E + +K+ C C +
Sbjct: 4 KTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILETKDKIGFCEKCNFIV 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
CA C D+ + +IVVE VA + + + N + VL LS + D
Sbjct: 64 ENGKCANC-DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVDFNY 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ I+ KKI E+I +S TIEGQ T +M + IDVK+TR A G+P+ + ++Y+D
Sbjct: 123 EHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKVTRAAVGLPLNANIEYID 182
Query: 188 DGTIFEAIRSRT 199
+ TI +AI +RT
Sbjct: 183 EFTIKQAIENRT 194
>gi|118475618|ref|YP_892295.1| recombination protein RecR [Campylobacter fetus subsp. fetus 82-40]
gi|118414844|gb|ABK83264.1| recombination protein RecR [Campylobacter fetus subsp. fetus 82-40]
Length = 189
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ +IPG G +SA + H+ + LA + + + CS+CG +
Sbjct: 7 EKFNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLNLAHTIEDAVRFLKHCSMCGGIS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D RD + +VE D+ +E S + N LY V + + LD+
Sbjct: 67 ENEICDICSDINRDKKTLCIVETPKDILTIEYSNSFNGLYFVFDDA-NKLDK-------- 117
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L I+ I+EL+FA++ +I YI DKLK DV T++A GIP G L+ +D
Sbjct: 118 --LKSNIKENGIKELLFALTPSINSDGMMLYIEDKLKDFDVSFTKIAQGIPTGVSLENVD 175
Query: 188 DGTIFEAIRSRTVL 201
++ +AI+ R L
Sbjct: 176 ILSLTKAIKDRRSL 189
>gi|291320672|ref|YP_003515937.1| Recombination protein RecR [Mycoplasma agalactiae]
gi|290753008|emb|CBH40984.1| Recombination protein RecR [Mycoplasma agalactiae]
Length = 195
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I+ L K L IP + A + +++K + + E + + +K+ C C +
Sbjct: 4 KTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILDTKDKIGFCKKCNFIV 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C D+ + +IVVE VA + + + N + VL LS + D
Sbjct: 64 ENGKCVNC-DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVDFNY 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ I+ KKI E+I +S TIEGQ T +M + IDVK TR A G+P+ S ++Y+D
Sbjct: 123 EHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKATRAAVGLPLNSNIEYID 182
Query: 188 DGTIFEAIRSRT 199
+ TI +AI +RT
Sbjct: 183 EFTIKQAIENRT 194
>gi|261885550|ref|ZP_06009589.1| recombination protein RecR [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 189
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ +IPG G +SA + H+ + LA + + + CS+CG +
Sbjct: 7 EKFNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLNLAHTIEDAVRFLKHCSMCGGIS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D RD + +VE D+ +E S ++N LY V + + LD+
Sbjct: 67 ENEICDICSDINRDKRSLCIVETPKDILPIEYSHSLNGLYFVFDDA-NKLDK-------- 117
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L I+ I+EL+FA++ +I YI DKLK DV T++A GIP G L+ +D
Sbjct: 118 --LKSNIKENGIKELLFALTRSINSDGMMLYIEDKLKDFDVSFTKIAQGIPTGVSLENVD 175
Query: 188 DGTIFEAIRSRTVL 201
++ +AI+ R L
Sbjct: 176 ILSLTKAIKDRRSL 189
>gi|86150705|ref|ZP_01068921.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
260.94]
gi|121613624|ref|YP_001000939.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926257|ref|ZP_01809942.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|167005850|ref|ZP_02271608.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81-176]
gi|205356281|ref|ZP_03223047.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|315124720|ref|YP_004066724.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|166221929|sp|A1W0P8|RECR_CAMJJ RecName: Full=Recombination protein recR
gi|85841875|gb|EAQ59121.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
260.94]
gi|87249985|gb|EAQ72944.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81-176]
gi|145845428|gb|EDK22521.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|205345886|gb|EDZ32523.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|284926488|gb|ADC28840.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315018442|gb|ADT66535.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 190
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R HL + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALSENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R+ +++ +VE D+ LE S++ N LY V LD + E ++ L +
Sbjct: 71 EICSDEERNKNILCIVESPKDILTLEESQSYNGLYFV-------LDELNEEK--LEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D ++
Sbjct: 122 IILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|152990929|ref|YP_001356651.1| recombination protein RecR [Nitratiruptor sp. SB155-2]
gi|172048733|sp|A6Q485|RECR_NITSB RecName: Full=Recombination protein recR
gi|151422790|dbj|BAF70294.1| DNA recombination protein RecR [Nitratiruptor sp. SB155-2]
Length = 190
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 9/191 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+ NL++ L +P G +SA R H+V LA A+ + + + C+ CG +
Sbjct: 6 KKFYNLVEALETLPSIGKKSAGRLAFHMVLHSPMDALKLAHAIEDAVSSIHRCTQCGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD S + +VE D++ +E S + LY V S +RI +
Sbjct: 66 EDELCYICSDELRDRSSLCLVESARDIYVIEESGEYHGLYFVFE---SLNERI------L 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L E I+ ++E+IFA + +++ T YI D+L+ + T++A G+P G L+ +D
Sbjct: 117 ANLKEMIKNNGVQEIIFAFTPSMQSDATMLYIEDQLQEFHLHFTKIAQGVPTGVHLENVD 176
Query: 188 DGTIFEAIRSR 198
++ +AI R
Sbjct: 177 MLSLSKAISER 187
>gi|86152659|ref|ZP_01070864.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157415527|ref|YP_001482783.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81116]
gi|172047168|sp|A8FMW9|RECR_CAMJ8 RecName: Full=Recombination protein recR
gi|85843544|gb|EAQ60754.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157386491|gb|ABV52806.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81116]
gi|307748167|gb|ADN91437.1| Recombination protein recR [Campylobacter jejuni subsp. jejuni M1]
gi|315932412|gb|EFV11355.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 327]
Length = 190
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R HL + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCGQCGALSENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R+ +++ +VE D+ LE S++ N LY V LD + E ++ L +
Sbjct: 71 EICSDEERNKNILCIVESPKDILTLEESQSYNGLYFV-------LDELNEEK--LEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D ++
Sbjct: 122 IILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|57242137|ref|ZP_00370077.1| recombination protein RecR [Campylobacter upsaliensis RM3195]
gi|57017329|gb|EAL54110.1| recombination protein RecR [Campylobacter upsaliensis RM3195]
Length = 192
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R L++ + L+ + N + C CG + + C
Sbjct: 12 LVESFANLPTIGKKTAIRLALYICMQNPLEGMKLSHNIENALRFIKSCKQCGALSENELC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG-IQSLI 131
IC D QRD ++I +VE+ D+ LE S N Y V L+ + E + ++++I
Sbjct: 72 EICTDTQRDENLICLVENAKDILILEESGGYNGFYFV-------LNELNEEKLSKLKAMI 124
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
E++ K +ELIFA++ ++ T +I + LK +++K++++A GIP G L+ +D ++
Sbjct: 125 EKL---KSKELIFALTHSVHSDATIFFIEENLKNLELKLSKIAQGIPSGVNLENVDFISL 181
Query: 192 FEAIRSRT 199
A+ RT
Sbjct: 182 HRAMNFRT 189
>gi|315638146|ref|ZP_07893328.1| recombination protein R [Campylobacter upsaliensis JV21]
gi|315481682|gb|EFU72304.1| recombination protein R [Campylobacter upsaliensis JV21]
Length = 209
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R L++ + L+ + N + C CG + + C
Sbjct: 29 LVESFANLPTIGKKTAIRLALYICMQNPLEGMKLSHNIENALRFIKSCKQCGALSENELC 88
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG-IQSLI 131
IC D QRD ++I +VE+ D+ LE S N Y V L+ + E + ++++I
Sbjct: 89 EICTDTQRDENLICLVENAKDILILEESGGYNGFYFV-------LNELNEEKLSKLKAMI 141
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
E++ K +ELIFA++ ++ T +I + LK +++K++++A GIP G L+ +D ++
Sbjct: 142 EKL---KSKELIFALTHSVHSDATIFFIEENLKNLELKLSKIAQGIPSGVNLENVDFISL 198
Query: 192 FEAIRSRT 199
A+ RT
Sbjct: 199 HRAMNFRT 206
>gi|86150596|ref|ZP_01068819.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596287|ref|ZP_01099524.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562875|ref|YP_002344654.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|20139828|sp|Q9PN35|RECR_CAMJE RecName: Full=Recombination protein recR
gi|85838947|gb|EAQ56213.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88191128|gb|EAQ95100.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360581|emb|CAL35378.1| recombination protein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927111|gb|EFV06462.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929717|gb|EFV08891.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 305]
Length = 190
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R HL + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALSENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R+ +++ +VE D+ LE S++ N LY V LD + E ++ L +
Sbjct: 71 EICSDKERNKNILCIVESPKDILTLEESQSYNGLYFV-------LDELNEEK--LEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D ++
Sbjct: 122 IILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|57238135|ref|YP_179385.1| recombination protein RecR [Campylobacter jejuni RM1221]
gi|73621476|sp|Q5HTK0|RECR_CAMJR RecName: Full=Recombination protein recR
gi|57166939|gb|AAW35718.1| recombination protein RecR [Campylobacter jejuni RM1221]
gi|315058696|gb|ADT73025.1| Recombination protein RecR [Campylobacter jejuni subsp. jejuni S3]
Length = 190
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R HL + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALSENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R+ +++ +VE D+ LE S++ N LY V LD + E ++ L +
Sbjct: 71 EICSDEERNKNILCIVESPKDILTLEESQSYNGLYFV-------LDELNEEK--LEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D ++
Sbjct: 122 IILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGINLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|322382241|ref|ZP_08056154.1| hypothetical protein PL1_3204 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153822|gb|EFX46190.1| hypothetical protein PL1_3204 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 105
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 72/102 (70%)
Query: 97 LERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTA 156
+ER+K + YHVL G++SP++ IGP+ I I L++R+ +K++ELI A + IEG+ TA
Sbjct: 1 MERTKEFDGYYHVLHGAISPMEGIGPDQIHIAELLKRLGDEKVQELILATNPNIEGEATA 60
Query: 157 HYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
YI +KG +K+TR+A G+P+G +L+Y D+ T+ +A+ R
Sbjct: 61 MYISRLVKGFGLKVTRIARGLPVGGDLEYADEVTLSKALEGR 102
>gi|304372904|ref|YP_003856113.1| Recombination protein [Mycoplasma hyorhinis HUB-1]
gi|304309095|gb|ADM21575.1| Recombination protein [Mycoplasma hyorhinis HUB-1]
gi|330723508|gb|AEC45878.1| recombination protein RecR [Mycoplasma hyorhinis MCLD]
Length = 190
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ GKE E LI PG G + A + L+ K + L++ + + + C C
Sbjct: 1 MFGKEYEELISTFKTFPGVGKKQAEKFFYFLLNKDIEFFQDLSQKIIKLKQNLQPCERCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V C+IC+D R +S I++VE+ +D+ E + Y V + G ++
Sbjct: 61 FVSLNVVCSICLDPDR-SSQIMLVENSSDVIKFENLRFYEGKYFVFDY------KKGVDN 113
Query: 125 IGIQSLIERIE--VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + I ++ +++ ELI A S IEG A+++M+ +VKI++LA GIP+G++
Sbjct: 114 KYLTAKINKLRNLIRENTELIVAFSFNIEGLVLANFVMNHKDLKNVKISKLASGIPLGAQ 173
Query: 183 LDYLDDGTIFEAIRSR 198
++Y+D+ T+ EAI++R
Sbjct: 174 IEYVDELTLKEAIKNR 189
>gi|17232469|ref|NP_489017.1| recombination protein [Nostoc sp. PCC 7120]
gi|17134115|dbj|BAB76676.1| recombination protein [Nostoc sp. PCC 7120]
Length = 108
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
+ ALE+++ YHVLGG +SP+D IGPE + I L+ R+ ++ +E+I AIS ++EG+
Sbjct: 1 MIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQQQPKEVILAISPSVEGE 60
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
TT Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+ R
Sbjct: 61 TTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYADEITLARALEGR 104
>gi|257459385|ref|ZP_05624496.1| recombination protein RecR [Campylobacter gracilis RM3268]
gi|257443238|gb|EEV18370.1| recombination protein RecR [Campylobacter gracilis RM3268]
Length = 189
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L+ ++PG G +SA R ++ + L LA + + C ICG V
Sbjct: 7 FEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRICGAVCEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +R++ I +VE+ D++ LE +K N Y VL + ++ I +
Sbjct: 67 EICEYCADDERESDKICIVENPKDIFILESNKIYNGRYFVLDAA---------DEDKIAA 117
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L E + RELIFA++ I Y+ DKL + +K T+LA G+P G LD +D
Sbjct: 118 LREMVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVSLDNVDML 177
Query: 190 TIFEAIRSRT 199
++ +AI RT
Sbjct: 178 SLIKAINGRT 187
>gi|153803673|ref|ZP_01958259.1| recombination protein RecR [Vibrio cholerae MZO-3]
gi|124120792|gb|EAY39535.1| recombination protein RecR [Vibrio cholerae MZO-3]
Length = 143
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQ 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+
Sbjct: 62 DVCHICRNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISAT 149
+L R++ I E+I A + T
Sbjct: 122 TLDYRLQRGDISEVILATNPT 142
>gi|255322440|ref|ZP_05363585.1| recombination protein RecR [Campylobacter showae RM3277]
gi|255300348|gb|EET79620.1| recombination protein RecR [Campylobacter showae RM3277]
Length = 190
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ R+PG G +SA+R H+ K LA+++ + C ICG +
Sbjct: 6 EKFNELVAAFERLPGVGKKSAQRYAYHVCLKDSFGGLKLAQSIEDAVRFTGKCQICGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD ++ VVE D+ E+S Y VL + I PE
Sbjct: 66 EDEICDICSDETRDKELLAVVESPKDILVFEQSAIYRGRYFVL-------EEITPEQT-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L E I + E+IFA++ + +I DKL + VK +++A G+P G L+ +D
Sbjct: 117 EKLREVIRQNGVTEIIFALTPGLSSDAVMVFIEDKLSDLGVKFSKIAQGVPTGVNLENID 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ SRT L
Sbjct: 177 LLSLMKALDSRTEL 190
>gi|283956658|ref|ZP_06374137.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
1336]
gi|283791907|gb|EFC30697.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
1336]
Length = 190
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R HL + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALSENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R+ +++ +VE D+ LE S++ N LY V LD + E ++ L +
Sbjct: 71 EICSDEERNKNILCIVESPKDILTLEESQSYNGLYFV-------LDELNEE--KLEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I I ELIFA++ +I T +I DK K +++ +++A GIP G L+ +D ++
Sbjct: 122 IILKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIAQGIPSGVNLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|317052105|ref|YP_004113221.1| Zinc finger C4-type protein RecR [Desulfurispirillum indicum S5]
gi|316947189|gb|ADU66665.1| Zinc finger C4-type, RecR [Desulfurispirillum indicum S5]
Length = 208
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L + LA+IPG G ++A R L + + A + N++ C C + +
Sbjct: 7 VELLAQGLAQIPGIGQKTAERFALEVAAMAPAKRQAIVRAFEELENRLIACDECHTLAES 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC +C + R+ + VVE DL A+E + LYHVLGG +SP+ P+D+ +Q+
Sbjct: 67 SPCPLCRNTSRNRRQLCVVETFHDLVAIENAGVYEGLYHVLGGKVSPVAHCSPQDLFLQT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELDYLD 187
L +RI + E+I A S T E + T + + + ++T + +P+G+ L
Sbjct: 127 LPQRIRELGVAEVIIAASHTPESRITMELVKRSVLSAKTNTQVTFFSSLLPVGAPLSICA 186
Query: 188 DGTIFEAIRSR 198
+ +A +R
Sbjct: 187 VDILKKAFHAR 197
>gi|255018815|ref|ZP_05290941.1| recombination protein RecR [Listeria monocytogenes FSL F2-515]
Length = 106
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 66/94 (70%)
Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
LYHVL G++SP+D IGPEDI I L++R++ I E+I A + +EG+ TA YI LK
Sbjct: 10 GLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLK 69
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+K+TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 70 PSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGR 103
>gi|283954827|ref|ZP_06372343.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 414]
gi|283793667|gb|EFC32420.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 414]
Length = 190
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R H+ + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHICTNNQIDGMKLAHNIENAIRFIKPCEQCGALSENEFC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++RD +++ +VE D+ LE SK+ N Y V LD + E ++ L +
Sbjct: 71 EICSDKERDKNILCIVESPKDILTLEESKSYNGFYFV-------LDELNEEK--LEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I ELIFA++ +I T +I DK K +++ +++A GIP G L+ +D ++
Sbjct: 122 IILKLNTSELIFALTHSINSDATIFFIEDKFKHLNLSFSKIAQGIPSGVNLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|152993460|ref|YP_001359181.1| recombination protein RecR [Sulfurovum sp. NBC37-1]
gi|151425321|dbj|BAF72824.1| DNA recombination protein RecR [Sulfurovum sp. NBC37-1]
Length = 189
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
ENL++ P G +SA R H V + LA A+ N + CS C N+
Sbjct: 9 FENLVEAFGSFPSIGKKSAIRLAYHSVMEDGFAAMKLAHAIETAVNSIHKCSKCHNMSED 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D RD + + +V+ D+ +E S + +Y+V+ D+
Sbjct: 69 ELCSICSDPYRDTAKLCIVQSAKDILTIEESGQFDGVYYVISEV---------RDLDEAH 119
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +E + E+IFA +I T YI DKL+G+ + T++A G+P G EL+ +D
Sbjct: 120 LFYAVE--GVEEIIFAFPPSIATDTMILYIEDKLQGLPISFTKIAQGVPTGVELENIDIM 177
Query: 190 TIFEAIRSR 198
++ A+ +R
Sbjct: 178 SLSRALEAR 186
>gi|293364018|ref|ZP_06610754.1| recombination protein RecR [Mycoplasma alligatoris A21JP2]
gi|292552508|gb|EFF41282.1| recombination protein RecR [Mycoplasma alligatoris A21JP2]
Length = 194
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE +I++L R+ G + A R +++ + + L ++ + N+V C CGN+ +
Sbjct: 7 IEKIIELLKRVDGISKKQAERILSWVIQSDIKDVETLLNSIKTLKNEVKECKRCGNLTAS 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D+ RD +V++VVE + +E+ + N Y V E + I++
Sbjct: 67 GVCNICLDEDRD-NVLLVVEHFNIIKKMEKEEIYNGKYFVF-----------KELLNIKN 114
Query: 130 LIERIEV---------KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E+IE K E+I AIS T+EG T Y+ L + T ++ G+P+G
Sbjct: 115 FNEKIEKYAYELAEYGKNFEEVILAISPTLEGAITNEYLKKYLTSKKINATSISIGVPVG 174
Query: 181 SELDYLDDGTIFEAIRSR 198
+ LDY+D TI ++I +R
Sbjct: 175 ASLDYIDKITIKQSIENR 192
>gi|109947625|ref|YP_664853.1| recombination protein RecR [Helicobacter acinonychis str. Sheeba]
gi|123066196|sp|Q17WX2|RECR_HELAH RecName: Full=Recombination protein recR
gi|109714846|emb|CAJ99854.1| recombination protein [Helicobacter acinonychis str. Sheeba]
Length = 193
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L L A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCNALSESEI 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K YHVL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSI---------ENVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ +KI+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|317011133|gb|ADU84880.1| recombination protein RecR [Helicobacter pylori SouthAfrica7]
Length = 193
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L L A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPFLALKLTHALENALENLKTCASCNALSESEI 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K YHVL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSI---------ENVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ +KI+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLVKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCRLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|313668352|ref|YP_004048636.1| recombination protein [Neisseria lactamica ST-640]
gi|313005814|emb|CBN87268.1| putative recombination protein [Neisseria lactamica 020-06]
Length = 172
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 34 HLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVAD 93
H K+ E+L+ L A+ + + C+ C C IC D+ RD ++VV AD
Sbjct: 4 HKRKEAEKLVDALQTALKQVNH----CARCNTFCEGGLCDICADETRDGRRLMVVHMPAD 59
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
+ +E + + LY VL G ++ + I + L +R+ ++ E+I A + T EG
Sbjct: 60 VSNMEAANCHDGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGN 119
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
TA+ + + K + K++RL+ GIP+G EL+Y+D GT+ +A+ R ++
Sbjct: 120 ATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLI 167
>gi|153951682|ref|YP_001397647.1| recombination protein RecR [Campylobacter jejuni subsp. doylei
269.97]
gi|171769455|sp|A7H2B7|RECR_CAMJD RecName: Full=Recombination protein recR
gi|152939128|gb|ABS43869.1| recombination protein RecR [Campylobacter jejuni subsp. doylei
269.97]
Length = 190
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ A +P G ++A R HL + LA + N + C CG + + C
Sbjct: 11 LVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALSENELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++R +++ +VE D+ LE S++ N LY V LD + E ++ L +
Sbjct: 71 EICSDEERSKNILCIVESPKDILTLEESQSYNGLYFV-------LDELNEE--KLEKLKQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
+ I ELIFA++ +I T +I DK K +++ +++A GIP G L+ +D ++
Sbjct: 122 ILLKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIAQGIPSGVNLENVDLISLN 181
Query: 193 EAIRSRT 199
+A+ RT
Sbjct: 182 KAMNFRT 188
>gi|57167625|ref|ZP_00366765.1| recombination protein RecR [Campylobacter coli RM2228]
gi|305433130|ref|ZP_07402286.1| recombination protein R [Campylobacter coli JV20]
gi|57020747|gb|EAL57411.1| recombination protein RecR [Campylobacter coli RM2228]
gi|304443831|gb|EFM36488.1| recombination protein R [Campylobacter coli JV20]
Length = 191
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 5 ITGKEIEN---LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
+T K IE L++ A++P G ++A R H+ + LA + N + C
Sbjct: 1 MTHKGIEKFNELVESFAKLPTIGKKTAIRLAYHICTGNQLEGMKLAHNIENAIRFIKPCQ 60
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG++ + C IC D +RD + + +V+ D+ +E SK+ LY V LD +
Sbjct: 61 QCGSLSENELCEICTDDERDKNCLCIVQSPKDVLVIEESKSYGGLYFV-------LDELN 113
Query: 122 PEDIG-IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E + ++ +I +++ K ELIFA + + YI D+LK ++++ +++A GIP G
Sbjct: 114 DEKLAQLRQMILKLQSK---ELIFAFTHNLNSDAMIFYIEDRLKDLNLQFSKIAQGIPSG 170
Query: 181 SELDYLDDGTIFEAIRSRT 199
L+ +D ++ +AI RT
Sbjct: 171 VNLENVDFISLNKAINFRT 189
>gi|309798671|ref|ZP_07692938.1| recombination protein RecR [Streptococcus infantis SK1302]
gi|308117717|gb|EFO55126.1| recombination protein RecR [Streptococcus infantis SK1302]
Length = 133
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I LI +++PG G ++A R + + + + A+ + ++ CSICG +
Sbjct: 7 IAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICGRLTDD 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+DI ++
Sbjct: 67 DPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLK 125
>gi|154174630|ref|YP_001407798.1| recombination protein RecR [Campylobacter curvus 525.92]
gi|112802205|gb|EAT99549.1| recombination protein RecR [Campylobacter curvus 525.92]
Length = 190
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLG-PLAEAMANIYNKVCLCSICGNV 66
++ L+ ++PG G +SA R + V ++ G LA+ + + + C CG +
Sbjct: 6 EKFNELVDAFGKLPGVGKKSAARFA-YFVSMQDSFAGLRLAQCIEDAARFIKRCERCGGL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D+ RD S+I +VE D+ E++ LY VL D I +D
Sbjct: 65 SENEICDICADEARDKSMIAIVESPRDILVFEQNGIYEGLYFVL-------DEI--DDGA 115
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L IE+ K E+IFA + + Y+ DKL ++K +++A G+P G L+ +
Sbjct: 116 INRLKSMIELNKATEIIFAFTPGLNTDALMLYVEDKLGMSELKFSKIAQGVPTGVSLENV 175
Query: 187 DDGTIFEAIRSRT 199
D ++ +A+ SRT
Sbjct: 176 DMLSLLKALESRT 188
>gi|254458961|ref|ZP_05072384.1| recombination protein RecR [Campylobacterales bacterium GD 1]
gi|207084232|gb|EDZ61521.1| recombination protein RecR [Campylobacterales bacterium GD 1]
Length = 189
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L+ L +P G +SA R H+V K + ++ + + + C++CG + + C
Sbjct: 11 LVDALQELPTIGKKSATRLAYHMVMKDSYVGMKISHTIEDALGSLKKCTVCGGMSEDELC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D++RD++V+ ++E+ D+ LE + + Y VL E++ I L++
Sbjct: 71 FICSDERRDSTVLCIIENAKDILLLEENGLFDGRYFVLD---------SLEELSISHLVK 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
+E + E++FA++ +I YI DKL G + +++A G+P G L+ +D ++
Sbjct: 122 IVE-SGVNEVLFALTPSISNDAVILYIEDKLSGHKLSFSKIAQGVPTGVSLENIDILSLT 180
Query: 193 EAIRSR 198
A+ R
Sbjct: 181 RALEDR 186
>gi|313682513|ref|YP_004060251.1| DNA replication and repair protein recr [Sulfuricurvum kujiense DSM
16994]
gi|313155373|gb|ADR34051.1| DNA replication and repair protein RecR [Sulfuricurvum kujiense DSM
16994]
Length = 189
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 12/192 (6%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ L +P G +SA R H+V LA A+ N + C CG +
Sbjct: 6 EKFNRLVDALQNLPTVGQKSATRLAYHMVMNDSFGALKLAHAIENAITSLKKCRSCGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG- 126
+ C+IC D++R+ V+ +VE+ D+ E + + Y V LD I DI
Sbjct: 66 EDELCSICSDERRNHEVLCIVENAKDILTFEENGLFDGRYFV-------LDSIEELDIAH 118
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ +I+ I+E+IFA++ +I Q YI DKL DV+ +R+A G+P G L+ +
Sbjct: 119 LRGVIQ----SGIKEVIFALTPSIANQGVMLYIEDKLIDCDVRFSRIAQGVPTGVSLENV 174
Query: 187 DDGTIFEAIRSR 198
D ++ +A+ R
Sbjct: 175 DILSLTKAMEDR 186
>gi|157737536|ref|YP_001490219.1| recombination protein RecR [Arcobacter butzleri RM4018]
gi|315637320|ref|ZP_07892538.1| recombination protein R [Arcobacter butzleri JV22]
gi|157699390|gb|ABV67550.1| recombination protein RecR [Arcobacter butzleri RM4018]
gi|315478363|gb|EFU69078.1| recombination protein R [Arcobacter butzleri JV22]
Length = 190
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ +P G +SA R H+V +A ++ N + CS CG++ + C
Sbjct: 11 LVEAFESLPTIGKKSALRLAYHIVMNDNYCGIKIAHSIENALKNITKCSRCGSMSEHEIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
C+D+ RD + +V+ D++ +E S + Y V + LD +D+ + SL
Sbjct: 71 EFCLDENRDNEKLCIVQSAKDIFVIEDSNQFDGRYFV----IEELD----QDV-LDSLQR 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
I ++ ++FAI+ +I +I DKLK D+K T++A G+P G L+ +D ++
Sbjct: 122 FILNNGVKTILFAITPSIANDAFILFIEDKLKDFDIKFTKIAQGVPTGVSLENVDILSLS 181
Query: 193 EAIRSR 198
+AI+S+
Sbjct: 182 KAIQSK 187
>gi|15645541|ref|NP_207717.1| recombination protein RecR [Helicobacter pylori 26695]
gi|207091729|ref|ZP_03239516.1| recombination protein RecR [Helicobacter pylori HPKX_438_AG0C1]
gi|210135115|ref|YP_002301554.1| recombination protein RecR [Helicobacter pylori P12]
gi|3024518|sp|P56214|RECR_HELPY RecName: Full=Recombination protein recR
gi|238058665|sp|B6JME6|RECR_HELP2 RecName: Full=Recombination protein recR
gi|2314062|gb|AAD07970.1| recombinational DNA repair protein (recR) [Helicobacter pylori
26695]
gi|210133083|gb|ACJ08074.1| recombinational DNA repair protein [Helicobacter pylori P12]
gi|317009582|gb|ADU80162.1| recombination protein RecR [Helicobacter pylori India7]
gi|317012734|gb|ADU83342.1| recombination protein RecR [Helicobacter pylori Lithuania75]
Length = 193
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + CS C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLN---------SIEEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|208434828|ref|YP_002266494.1| recombinational DNA repair protein [Helicobacter pylori G27]
gi|238058666|sp|B5Z7S9|RECR_HELPG RecName: Full=Recombination protein recR
gi|208432757|gb|ACI27628.1| recombinational DNA repair protein [Helicobacter pylori G27]
Length = 193
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + CS C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLN---------SIEEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQRFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|268679206|ref|YP_003303637.1| recombination protein RecR [Sulfurospirillum deleyianum DSM 6946]
gi|268617237|gb|ACZ11602.1| recombination protein RecR [Sulfurospirillum deleyianum DSM 6946]
Length = 189
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ ++P G +SA R HLV L L+ + + + C CG +
Sbjct: 6 EKFNKLVEAFEKLPTVGRKSALRFAYHLVLNDTSLAMKLSHTIESAIKSIRKCERCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC+D++RD + + VVE D++ LE K + Y VL LD
Sbjct: 66 EHELCDICVDERRDHAKLCVVESAKDIFILEEHKLFDGNYFVLAS----LD--------- 112
Query: 128 QSLIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ER+E + ++E+IFA++ ++ ++ D+LK + T++A G+P G L+
Sbjct: 113 EEILERLENRIKEGVQEVIFALTPSLSTDALILFVEDRLKAYALHFTKIAQGVPTGVHLE 172
Query: 185 YLDDGTIFEAIRSRT 199
+D ++ +A+ +RT
Sbjct: 173 NVDMLSLSKALEART 187
>gi|315586870|gb|ADU41251.1| recombination protein R [Helicobacter pylori 35A]
Length = 193
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNAISESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIKENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|154148981|ref|YP_001406701.1| recombination protein RecR [Campylobacter hominis ATCC BAA-381]
gi|153804990|gb|ABS51997.1| recombination protein RecR [Campylobacter hominis ATCC BAA-381]
Length = 189
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L+ ++PG G +SA R H+ L LA ++ N + C +CG
Sbjct: 3 NNTKFDELVATFEKLPGVGKKSALRYAYHISINDPFLGLNLANSIENAVRNLRRCEVCGA 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD I +VE D+ E + + LY VL S +
Sbjct: 63 ICEDEICEVCCDTSRDREKICIVESPKDILIFEENAIFDGLYFVLDSSGDEI-------- 114
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L IE+ ++ELIFA++ + Y+ DK+ ++K +++A GIP G +D
Sbjct: 115 -ITKLQRMIELNGVKELIFAMTPGVNSDMLMLYVEDKISIPNLKFSKIAQGIPTGVSVDS 173
Query: 186 LDDGTIFEAIRSR 198
+D ++ +A++ R
Sbjct: 174 IDFISLSKALKDR 186
>gi|307637615|gb|ADN80065.1| Recombination protein [Helicobacter pylori 908]
gi|325996209|gb|ADZ51614.1| Recombination protein [Helicobacter pylori 2018]
gi|325997803|gb|ADZ50011.1| Recombination protein [Helicobacter pylori 2017]
Length = 193
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|317014334|gb|ADU81770.1| recombination protein RecR [Helicobacter pylori Gambia94/24]
Length = 193
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++
Sbjct: 124 KRLVGENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|217033994|ref|ZP_03439417.1| hypothetical protein HP9810_883g64 [Helicobacter pylori 98-10]
gi|308183077|ref|YP_003927204.1| recombination protein RecR [Helicobacter pylori PeCan4]
gi|216943627|gb|EEC23075.1| hypothetical protein HP9810_883g64 [Helicobacter pylori 98-10]
gi|297380122|gb|ADI35009.1| recombination protein RecR [Helicobacter pylori v225d]
gi|308063754|gb|ADO05641.1| recombination protein RecR [Helicobacter pylori Sat464]
gi|308065262|gb|ADO07154.1| recombination protein RecR [Helicobacter pylori PeCan4]
gi|317182224|dbj|BAJ60008.1| recombination protein RecR [Helicobacter pylori F57]
gi|332673764|gb|AEE70581.1| recombination protein R [Helicobacter pylori 83]
Length = 193
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|108563331|ref|YP_627647.1| recombination protein RecR [Helicobacter pylori HPAG1]
gi|122386389|sp|Q1CSU9|RECR_HELPH RecName: Full=Recombination protein recR
gi|107837104|gb|ABF84973.1| recombinational DNA repair protein [Helicobacter pylori HPAG1]
Length = 193
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|298736120|ref|YP_003728645.1| recombination protein recr [Helicobacter pylori B8]
gi|298355309|emb|CBI66181.1| Recombination protein recR [Helicobacter pylori B8]
gi|317180227|dbj|BAJ58013.1| recombination protein RecR [Helicobacter pylori F32]
Length = 193
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEI 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|261839711|gb|ACX99476.1| recombination protein RecR [Helicobacter pylori 52]
gi|317177712|dbj|BAJ55501.1| recombination protein RecR [Helicobacter pylori F16]
gi|317178725|dbj|BAJ56513.1| recombination protein RecR [Helicobacter pylori F30]
Length = 193
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALRITHALENALENLKTCASCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|308184709|ref|YP_003928842.1| recombination protein RecR [Helicobacter pylori SJM180]
gi|308060629|gb|ADO02525.1| recombination protein RecR [Helicobacter pylori SJM180]
Length = 193
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++
Sbjct: 124 KRLIGEDIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|308062241|gb|ADO04129.1| recombination protein RecR [Helicobacter pylori Cuz20]
Length = 193
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|188527748|ref|YP_001910435.1| recombination protein RecR [Helicobacter pylori Shi470]
gi|238691933|sp|B2UU73|RECR_HELPS RecName: Full=Recombination protein recR
gi|188143988|gb|ACD48405.1| recombination protein RecR [Helicobacter pylori Shi470]
Length = 193
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEI 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|294155948|ref|YP_003560332.1| recombination protein RecR [Mycoplasma crocodyli MP145]
gi|291600313|gb|ADE19809.1| recombination protein RecR [Mycoplasma crocodyli MP145]
Length = 193
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I NLI ++ I R A + ++ ++ + L A+ + + CSIC N+ T
Sbjct: 6 INNLISLVKNIDTVSKRQAEKIVSWIINCPKEQINELVSAINLVKTNINKCSICTNLTTN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RD ++++VVE+ ++ +E ++ N Y V + P + +DI ++
Sbjct: 66 EVCEICTSEDRD-NILMVVENFNNIKKIEENEIFNGKYFVFSELIKP--KKTSQDIEKKA 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
E+I AIS T+EG+ T ++ LK + ++ ++ GIP+G+ +DY+D
Sbjct: 123 EELAQFSANFDEVILAISPTLEGEITNEFLRKYLKNRKINVSSISIGIPVGANIDYIDSI 182
Query: 190 TIFEAIRSR 198
++ ++I +R
Sbjct: 183 SLKQSIINR 191
>gi|261838299|gb|ACX98065.1| recombinational DNA repair protein [Helicobacter pylori 51]
Length = 193
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALRITHALENALENLKTCASCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|222823521|ref|YP_002575095.1| recombination protein RecR [Campylobacter lari RM2100]
gi|222538743|gb|ACM63844.1| recombination protein RecR [Campylobacter lari RM2100]
Length = 190
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ + +P G +SA R H+ K L LA + + C+ CG +
Sbjct: 5 EKFNELVSAFSALPTIGKKSALRLAYHVCIKDPLLGSKLAYHIEESIRMIKKCTQCGALS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED-IG 126
+ C +C + +R+ ++I +V+D D+ LE S + + LY V LD I E+ I
Sbjct: 65 ENELCEVCSNIERNHNIICIVQDSKDVLVLEDSGSYDGLYFV-------LDDISEENIIK 117
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++S+IE K E+ FA + + ++ +KLK +++ +++A GIP G L+ +
Sbjct: 118 LRSMIEH---NKTTEIFFAFTQGLNSDAIVFFVEEKLKDLNLSFSQIAQGIPSGVSLENV 174
Query: 187 DDGTIFEAIRSRTVL 201
D ++ +AI RT L
Sbjct: 175 DFISLHKAINHRTRL 189
>gi|47458910|ref|YP_015772.1| recombination protein RecR [Mycoplasma mobile 163K]
gi|47458238|gb|AAT27561.1| recombination protein [Mycoplasma mobile 163K]
Length = 196
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 104/196 (53%), Gaps = 5/196 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K ENL+ L +PG + A + + ++++ K+ +L L +A + + C+ C
Sbjct: 1 MNNKTFENLVLSLKELPGISKKQAEKISFYIIQSKKDVLNNLIDAFQKAKSNLVKCNNCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+ICID+ RD ++VVE ++ E + + Y V+ + D
Sbjct: 61 LISEHQLCSICIDKSRDNK-LMVVESSLEVNKFEDLQIYSGKYFVVDSLIKNFDDKSTY- 118
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182
+ I +I + E+I A+S T+EG+ +A YI + + K ++KI++LA G+P+GS+
Sbjct: 119 FETYNKIFKI-LPNADEVILALSPTLEGEVSAIYIKNLINEKFPNLKISQLANGLPVGSQ 177
Query: 183 LDYLDDGTIFEAIRSR 198
++Y+D T+ A ++R
Sbjct: 178 VEYIDSLTLNFAFKNR 193
>gi|26554261|ref|NP_758195.1| recombination protein RecR [Mycoplasma penetrans HF-2]
gi|26454270|dbj|BAC44599.1| recombinational DNA repair protein RecR [Mycoplasma penetrans HF-2]
Length = 201
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
KE E ++ L +P ++A + ++ E + + ++ + + C C N+
Sbjct: 4 KEFEYFVEALKSLPTISNKNASKIAYFFLEADEVFYSQFLDRLTSLKSNIKFCLNCNNL- 62
Query: 68 TTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T+D C IC RD + + +V + DL +E S + + LY VL + D + I
Sbjct: 63 TSDSLYCDICNTDSRDKNKLCIVSYLEDLEKIEASNSFSGLYFVLNTEIKHKDLKTAKKI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMD--KLKGIDVKITRLAYGIPMGSEL 183
++ L I +RE++ + TI+G+ T+ YI + K K ++ + RLA GIPM + +
Sbjct: 123 NLEKLENMINKFHVREILICTNMTIDGELTSSYIKNFIKEKNYNIDLYRLALGIPMNASI 182
Query: 184 DYLDDGTIFEAIRSR 198
+Y+D ++ +I ++
Sbjct: 183 EYIDWESLKYSIENK 197
>gi|291277441|ref|YP_003517213.1| recombination protein [Helicobacter mustelae 12198]
gi|290964635|emb|CBG40489.1| recombination protein [Helicobacter mustelae 12198]
Length = 193
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLG-PLAEAMANIYNKVCLCSICGNV 66
+ L++ L +IP G +SA + + + + + LG +A + N + CS+C +
Sbjct: 9 RHFNALLESLEQIPAIGKKSALKIA-YAISVENKFLGLKIAHCIENAISHARNCSLCNAL 67
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D+ RD+S + +V D++ +E + LY V+ P+ +
Sbjct: 68 SENELCDICSDENRDSSQLCMVLHSKDIFTIEETGDYKGLYFVIQD---------PKALD 118
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L ++I + RE+IFA S T+ YI DKL+ +D+ +++A G+P G LD +
Sbjct: 119 FSRLQKQILDHQTREIIFAFSPTLANDAIMLYIEDKLQHLDLSFSKIAQGVPTGIGLDNV 178
Query: 187 DDGTIFEAIRSRT 199
D ++ +AI RT
Sbjct: 179 DQLSLSKAILWRT 191
>gi|254779526|ref|YP_003057632.1| recombination protein RecR [Helicobacter pylori B38]
gi|254001438|emb|CAX29433.1| Recombination protein RecR [Helicobacter pylori B38]
Length = 193
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C C + ++
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCVSCNALSESEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R S + +V D++ LE K Y+VL E++ +L
Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++
Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|15611926|ref|NP_223577.1| recombination protein RecR [Helicobacter pylori J99]
gi|6685855|sp|Q9ZKS6|RECR_HELPJ RecName: Full=Recombination protein recR
gi|4155437|gb|AAD06442.1| RECOMBINATION PROTEIN [Helicobacter pylori J99]
Length = 193
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NL+ L +IP G +SA + HL + L + A+ N + C+ C + T+
Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALRNALENLKTCASCNALSETEV 72
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
IC D+ R S + +V D++ LE K Y+VL ED+ +L
Sbjct: 73 SEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EDVDFNALE 123
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++
Sbjct: 124 KRLIGENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183
Query: 192 FEAIRSR 198
A SR
Sbjct: 184 SRAFNSR 190
>gi|157164121|ref|YP_001466292.1| recombination protein RecR [Campylobacter concisus 13826]
gi|112800886|gb|EAT98230.1| recombination protein RecR [Campylobacter concisus 13826]
Length = 190
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLG-PLAEAMANIYNKVCLCSICGNV 66
++ L + A++PG G +SA R + V ++ G LA+ + + + C CG +
Sbjct: 6 EKFNELTESFAKLPGVGKKSAARFA-YFVCMQDSFAGLRLAQNIEDAVRFIKRCERCGGL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D+ RD+ VI++VE D+ E++ N LY V LD I +D
Sbjct: 65 SENEICDICSDESRDSEVILLVESPKDILVFEQNGIYNGLYFV-------LDEI--DDDT 115
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L I+ +E++FA + + Y+ DKL ++ +++A G+P G L+ +
Sbjct: 116 IERLRSAIKQNGSKEVVFAFTPGLNSDALMLYVEDKLGMSEISFSKIAQGVPTGVNLENV 175
Query: 187 DDGTIFEAIRSRT 199
D ++ +A SRT
Sbjct: 176 DMLSLLKAYESRT 188
>gi|15828522|ref|NP_325882.1| recombination protein RecR [Mycoplasma pulmonis UAB CTIP]
gi|20139646|sp|Q98RF8|RECR_MYCPU RecName: Full=Recombination protein recR
gi|14089464|emb|CAC13224.1| RECOMBINATION PROTEIN RECR [Mycoplasma pulmonis]
Length = 191
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + I+NLI L ++PG G + A + + L+K+ E + + ++ ++ + C C
Sbjct: 1 MKNQYIDNLILNLKKLPGVGTKQAEKISFFLLKQNENEVEQIINSIVDLKKNIKECQNCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + + C C+D+ R+ ++I E +D E+ Y ++ + + E
Sbjct: 61 FLQSNNICHFCMDKSRNKQLMIF-ETTSDALKFEKLGIYRGKYFIIKNLIENVKN-ANEP 118
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
L+ E+I A++ TIEGQ T++YI L+ + +K+T+LA G+P+ S++D
Sbjct: 119 KWKDKLLHY--ASNFEEIIIALNPTIEGQITSNYIKVILEEVALKVTKLAQGLPINSQID 176
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ + +R
Sbjct: 177 YIDPITLNLSFENR 190
>gi|223040226|ref|ZP_03610504.1| recombination protein RecR [Campylobacter rectus RM3267]
gi|222878479|gb|EEF13582.1| recombination protein RecR [Campylobacter rectus RM3267]
Length = 190
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ R+PG G +SA+R H+ K LA+++ + C ICG +
Sbjct: 6 EKFNELVAAFERLPGVGKKSAQRYAYHVCLKDSFGGLKLAQSIEDAVRFTGKCQICGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD ++ VVE D+ E+S Y L E+I
Sbjct: 66 EDEICDICSDETRDKELLAVVESPKDILVFEQSAIYRGRYFAL------------EEI-T 112
Query: 128 QSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
Q E++ + E+IFA++ + +I DKL ++VK +++A G+P G L
Sbjct: 113 QGQTEKLRTVIVQNGVTEIIFALTPGLSSDAVMIFIEDKLSDLNVKFSKIAQGVPTGVNL 172
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D ++ +A+ SRT L
Sbjct: 173 ENIDILSLMKALDSRTKL 190
>gi|78777482|ref|YP_393797.1| recombination protein RecR [Sulfurimonas denitrificans DSM 1251]
gi|78498022|gb|ABB44562.1| DNA replication and repair protein RecR [Sulfurimonas denitrificans
DSM 1251]
Length = 189
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ +P G +SA R H+V K + +A A+ + C+ CG +
Sbjct: 6 EKFNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEEALGSIKQCAACGGMS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD +++ +VE+ D+ LE ++ + Y VL SL + G+
Sbjct: 66 EDELCFICCDESRDETLLCIVENAKDILLLEENRLFDGRYFVL-DSLENFNL-----SGL 119
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL++ + E++FA++ +I YI DKL + +++A G+P G L+ +D
Sbjct: 120 ESLVKN----GVEEIVFALTPSIANDAVILYIEDKLSDFTINFSKIAQGVPTGVSLENID 175
>gi|238021753|ref|ZP_04602179.1| hypothetical protein GCWU000324_01656 [Kingella oralis ATCC 51147]
gi|237866367|gb|EEP67409.1| hypothetical protein GCWU000324_01656 [Kingella oralis ATCC 51147]
Length = 120
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 69/110 (62%)
Query: 92 ADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIE 151
AD+ A+E + + LY VL GS++P + + ++ LI R+ ++E+I A S T E
Sbjct: 3 ADVAAMEAAHCHDGLYFVLMGSVNPTQNMDLSHVALEKLIARLADSPVQEIIIATSFTAE 62
Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
G TA+ + + LK KI+RLA G+P+GSEL+Y+D GT+ +A+ R +L
Sbjct: 63 GDATAYILTELLKEQPYKISRLARGMPLGSELEYVDAGTLAQAVYERQLL 112
>gi|32267017|ref|NP_861049.1| recombination protein RecR [Helicobacter hepaticus ATCC 51449]
gi|32263069|gb|AAP78115.1| recombination protein RecR [Helicobacter hepaticus ATCC 51449]
Length = 195
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
Q K + K LI L ++P G +SA++ L + + L +A A+ N V C
Sbjct: 3 QYKSSLKAFSELISTLEKLPAIGKKSAQKMAYALCMENKFLGLNIAHAIENAALLVQKCH 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
C + ++ C IC+D R+ + +V + D++ LE Y V LD G
Sbjct: 63 KCFGISESEICDICLDSSRENGELCIVANPRDIFTLEDMGEFKGRYFV-------LDSQG 115
Query: 122 P-EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E I L +RI+ + +RE+IFA+S ++ + YI DK+K + + +++A G+P G
Sbjct: 116 DLEQIDFTLLNQRIDTESVREIIFALSPSLANEAIMLYIEDKIK-MPLHFSKIAQGVPTG 174
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
LD +D ++ A+ R L
Sbjct: 175 IGLDAIDQLSLSRAMSLRVKL 195
>gi|240047505|ref|YP_002960893.1| recombination protein RecR [Mycoplasma conjunctivae HRC/581]
gi|239985077|emb|CAT05070.1| Recombination protein [Mycoplasma conjunctivae]
Length = 194
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G + E L K + +PG G + + + L+ + E + N+ C C
Sbjct: 1 MYGNDFEELAKKIKILPGVGKKQSEKILHFLLDAPIDDINTFIEELYNLKKNFQHCRQCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG----SLSPLDRI 120
V C+IC+D QR+ I+VVE+ + E S Y VLG +LS LD
Sbjct: 61 FVSRNRLCSICLDDQRENK-ILVVENSDIVAKFENSGEYKGRYFVLGDFNIKNLSALDD- 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I L +I ELI IS+T++G YI ++KI++LA GIP G
Sbjct: 119 -----KINQL--KIMANNDSELILGISSTLDGLIVTSYITKHEVVANLKISQLATGIPFG 171
Query: 181 SELDYLDDGTIFEAIRSR 198
+ +DYLD T+ +A+++R
Sbjct: 172 ANIDYLDKITLQQALKNR 189
>gi|89892381|gb|ABD78970.1| HI0443-like protein [Haemophilus influenzae]
Length = 109
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%)
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
+ A+E++ + Y VL G LSPLD IGP +IG+ L +R+ + E+I A + T+EG
Sbjct: 1 IQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGD 60
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
TA+YI + + ++K++R+A+GIP+G EL+ +D T+ + R
Sbjct: 61 ATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGR 105
>gi|149912023|ref|ZP_01900616.1| recombination protein RecR [Moritella sp. PE36]
gi|149804884|gb|EDM64919.1| recombination protein RecR [Moritella sp. PE36]
Length = 99
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%)
Query: 107 YHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI 166
Y VL G LSPLD IGP++IG+ L E + ELI A + T+EG+ TA+YI + +
Sbjct: 4 YFVLMGHLSPLDGIGPDEIGLDKLAELLASGDYEELILATNPTVEGEATAYYIAEIAQEY 63
Query: 167 DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
VK +R+A+G+P+G EL+Y+D T+ ++ R ++
Sbjct: 64 GVKASRIAHGVPVGGELEYVDGTTLSHSLLGRQLI 98
>gi|307721329|ref|YP_003892469.1| DNA replication and repair protein RecR [Sulfurimonas autotrophica
DSM 16294]
gi|306979422|gb|ADN09457.1| DNA replication and repair protein RecR [Sulfurimonas autotrophica
DSM 16294]
Length = 189
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ L +P G +SA R +++ +A A+ + + C CG +
Sbjct: 6 EKFNRLVEALGELPSIGKKSATRLAYYMIMNDTFAGMKIAHAIEDALGSLKKCKECGGMS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RDAS++ +VE+ D+ LE + + Y VL SL L
Sbjct: 66 EDELCYICCDEMRDASLLCIVENAKDILLLEENGLFDGKYFVL-ESLEELS--------- 115
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
S +E I + E++FA++ +I YI DKL D+ +++A G+P G L+ +D
Sbjct: 116 MSHLETIVQNGVSEVLFALTPSIANDAVILYIEDKLGIYDLNFSKIAQGVPTGVSLENID 175
Query: 188 DGTIFEAIRSR 198
++ A+ R
Sbjct: 176 LLSLTRALEDR 186
>gi|71894077|ref|YP_278185.1| recombination protein RecR [Mycoplasma synoviae 53]
gi|71850865|gb|AAZ43474.1| putative recombination protein [Mycoplasma synoviae 53]
Length = 194
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE I + +IPG + A + ++ K+ + L+ + + + CS C
Sbjct: 7 IEEFITKIRKIPGISRKQAEKIVAWILYSKDDEIYELSNYFKKLKDNISFCSFCNIPQEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R+ ++VVE+ + LE+ Y V + + + +
Sbjct: 67 NNCYICNDTSRENK-LLVVENPLIIEKLEKLSLFKGKYFVFKNLVKNEKSLDKFYLDLSK 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++ K E+IF IS T+EG+ T + I + + + ++LA GIP+G+ +DY+D+
Sbjct: 126 LLKY--CKNFEEVIFGISPTLEGEVTTNLIRKEFEKFQINSSQLAIGIPIGASIDYMDEI 183
Query: 190 TIFEAIRSR 198
T+ +I++R
Sbjct: 184 TLKFSIKNR 192
>gi|269114871|ref|YP_003302634.1| Recombination protein recR [Mycoplasma hominis]
gi|268322496|emb|CAX37231.1| Recombination protein recR [Mycoplasma hominis ATCC 23114]
Length = 196
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI+ L ++L + F + +++ ++ K + + + + + N + C+IC +
Sbjct: 5 EIQKLEELLKTVFDFTKKQSQKFIFNIFKSSSEDIDQICNQIKALRNSIKKCNICNRYNE 64
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC+D R +++V + D+ E Y V ++S + ED +
Sbjct: 65 NTICNICLDTNRTKQLMLVGNSL-DIDKFENIGLYKGKYFVFDQNIS----LKNEDFIVS 119
Query: 129 SLIERI--EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDV-KITRLAYGIPMGSELD 184
SL+E++ +K ELI ++S TIEGQ HYI LK I+ + +L+ GIP+GS ++
Sbjct: 120 SLLEKLIDILKDKNELILSLSPTIEGQFNMHYIKKFLKNKINFTNVFQLSTGIPLGSSVE 179
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ E++ ++
Sbjct: 180 YIDQDTLKESLLNK 193
>gi|83749763|ref|ZP_00946739.1| RecR [Ralstonia solanacearum UW551]
gi|83723583|gb|EAP70785.1| RecR [Ralstonia solanacearum UW551]
Length = 156
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP
Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPTGT 127
Query: 126 GIQSLIER 133
++ L+ R
Sbjct: 128 HLEPLLAR 135
>gi|54020351|ref|YP_115635.1| recombination protein RecR [Mycoplasma hyopneumoniae 232]
gi|53987524|gb|AAV27725.1| recombination protein recR [Mycoplasma hyopneumoniae 232]
Length = 194
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+NL + L +IPG + A R LV + + A+ ++ C CG ++T
Sbjct: 6 FKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLNTN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D QR I+VVE+ + E + Y V G + + + I+
Sbjct: 66 PVCEICLDFQRSFK-ILVVENTEMIAKFEEYGKYDGQYFVFGK--YDIKNLENHNTQIKK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + K E+I +S+T+EG A+Y+ +KITRLA GIP G+ +DY+D+
Sbjct: 123 LADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYIDNI 180
Query: 190 TIFEAIRSR 198
T+ +A+++R
Sbjct: 181 TLDQALKNR 189
>gi|319956222|ref|YP_004167485.1| DNA replication and repair protein recr [Nitratifractor salsuginis
DSM 16511]
gi|319418626|gb|ADV45736.1| DNA replication and repair protein RecR [Nitratifractor salsuginis
DSM 16511]
Length = 189
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K+ + E L++ +P G ++A R HLV ++ LA+A+ + + + C
Sbjct: 2 KRYRVESFERLVEAFNALPTIGRKTATRLAYHLVTEQGFSGLKLAQAIEDAVSSLRTCRR 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + + C IC D RD S + +V+ D++ +E S LY++L S+ LD
Sbjct: 62 CHAICEDELCGICSDPGRDRSKLCIVQSAKDIFTIEESGQYEGLYYIL-SSIEELDESHL 120
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+I V+ + E+IFA I T YI D+L + T++A G+P G E
Sbjct: 121 HEI----------VEGVEEVIFAFPPGIATDTMILYIEDRLSDRGLVFTKIAQGVPTGVE 170
Query: 183 LDYLDDGTIFEAIRSR 198
LD +D ++ A+ R
Sbjct: 171 LDNIDLLSLSRALEDR 186
>gi|72080597|ref|YP_287655.1| recombination protein RecR [Mycoplasma hyopneumoniae 7448]
gi|71913721|gb|AAZ53632.1| recombination protein recR [Mycoplasma hyopneumoniae 7448]
gi|312601233|gb|ADQ90488.1| Recombination protein recR [Mycoplasma hyopneumoniae 168]
Length = 194
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+NL + L +IPG + A R LV + + A+ ++ C CG ++T
Sbjct: 6 FKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLNTN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D QR I+VVE+ + E + Y V G + + + I+
Sbjct: 66 PVCEICLDFQRSFK-ILVVENTEMIAKFEEYGKYDGQYFVFGK--YDIKNLENHNAQIKK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + K E+I +S+T+EG A+Y+ +KITRLA GIP G+ +DY+D+
Sbjct: 123 LADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYIDNI 180
Query: 190 TIFEAIRSR 198
T+ +A+++R
Sbjct: 181 TLDQALKNR 189
>gi|71893606|ref|YP_279052.1| recombination protein RecR [Mycoplasma hyopneumoniae J]
gi|71851733|gb|AAZ44341.1| recombination protein [Mycoplasma hyopneumoniae J]
Length = 194
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+NL + L +IPG + A R LV + + A+ ++ C CG ++T
Sbjct: 6 FKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAIYDLKKNTQYCEKCGYLNTN 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC+D QR I+VVE+ + E + Y V G + + + I+
Sbjct: 66 PVCEICLDFQRSFK-ILVVENTEMIAKFEEYGKYDGQYFVFGK--YDIKNLENHNAQIKK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + K E+I +S+T+EG A+Y+ +KITRLA GIP G+ +DY+D+
Sbjct: 123 LADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYIDNI 180
Query: 190 TIFEAIRSR 198
T+ +A+++R
Sbjct: 181 TLDQALKNR 189
>gi|262171931|ref|ZP_06039609.1| recombination protein recR [Vibrio mimicus MB-451]
gi|261893007|gb|EEY38993.1| recombination protein recR [Vibrio mimicus MB-451]
Length = 117
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 64/106 (60%)
Query: 96 ALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTT 155
ALE + + Y VL G LSPLD IG DI + +L R++ K I E+I A + T+EG+ T
Sbjct: 11 ALEATGQFSGRYFVLMGHLSPLDGIGSSDIWLDTLDYRLQRKDISEVILATNPTVEGEAT 70
Query: 156 AHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A YI + + V +R+A+G+P+G EL+ +D T+ ++ R L
Sbjct: 71 AQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGRHKL 116
>gi|56807612|ref|ZP_00365515.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Streptococcus pyogenes M49 591]
Length = 87
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 61/87 (70%)
Query: 115 SPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174
SP++ +GP+DI ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA
Sbjct: 1 SPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLA 60
Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201
G+ +GS+++Y D+ T+ AI +RT L
Sbjct: 61 RGLAVGSDIEYADEVTLLRAIENRTEL 87
>gi|225025708|ref|ZP_03714900.1| hypothetical protein EIKCOROL_02610 [Eikenella corrodens ATCC
23834]
gi|224941489|gb|EEG22698.1| hypothetical protein EIKCOROL_02610 [Eikenella corrodens ATCC
23834]
Length = 124
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 69/113 (61%)
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
++V AD+ +E + + LY VL G +SP + + I + L+ R++ ++ E+I A
Sbjct: 1 MIVHLPADVAGMEAAHCHDGLYFVLMGQISPAQGMDLQHIALDKLVARLQESEVEEVIIA 60
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ T EG TA+ + + K + +++RLA G+P+GSEL+Y+D GT+ +++ R
Sbjct: 61 TAFTPEGNATAYVLAELFKNLPYRVSRLAQGMPLGSELEYIDAGTLAQSVYER 113
>gi|237752563|ref|ZP_04583043.1| recombination protein RecR [Helicobacter winghamensis ATCC BAA-430]
gi|229376052|gb|EEO26143.1| recombination protein RecR [Helicobacter winghamensis ATCC BAA-430]
Length = 190
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ L RIP G +SA R L + + +A + ++ C CG + C
Sbjct: 11 LVESLERIPSVGRKSAMRLAYFLAFEDKFSALQVAHNIECCVQELRTCEECGGITNQAVC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC+D R+ + +V + +++ LE S Y VL LD++ E + E
Sbjct: 71 EICLDATRNNGELCIVANPREIFLLEESGEFFGKYFVL----DSLDKLNLEQL------E 120
Query: 133 RIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R K I E+IFA S ++ + Y+ DKL+ ++ T++A GIP G L+ +D +I
Sbjct: 121 RSVTKFGITEIIFAFSPSLGSDSIMLYLEDKLENFGLRFTKIAQGIPTGVSLENVDQLSI 180
Query: 192 FEAIRSR 198
A++SR
Sbjct: 181 IRALQSR 187
>gi|34557110|ref|NP_906925.1| recombination protein RecR [Wolinella succinogenes DSM 1740]
gi|34482825|emb|CAE09825.1| RECOMBINATION PROTEIN [Wolinella succinogenes]
Length = 190
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
L++ L ++P G +SA R L +++ LA A+ K+ C CG + +
Sbjct: 10 TLVESLEKLPSVGRKSALRLGYFLAIEEKFSALKLAHAIEEAVVKIKRCERCGALSEHEL 69
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D+ R + +V D++ LE SK Y V+ ED L
Sbjct: 70 CEICSDETRLNGQLCIVTHPKDIFILEESKHFEGRYFVIDS---------LEDCDFTLLR 120
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
I KI E+IFA S ++ + Y+ DKL+ + V +++A G+P G L+ +D ++
Sbjct: 121 SLIVSLKITEVIFAFSPSLSNDSIIFYVEDKLQDLGVSFSKIAQGVPTGVSLENIDQLSL 180
Query: 192 FEAIRSRTVL 201
A SR L
Sbjct: 181 TRAFDSRIKL 190
>gi|224438029|ref|ZP_03658968.1| recombination protein RecR [Helicobacter cinaedi CCUG 18818]
gi|313144474|ref|ZP_07806667.1| recombination protein recR [Helicobacter cinaedi CCUG 18818]
gi|313129505|gb|EFR47122.1| recombination protein recR [Helicobacter cinaedi CCUG 18818]
Length = 199
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + + +LI L ++P G +SA++ L + + L +A A+ N V C+ C
Sbjct: 5 KSSLRAFADLIAALEKLPTIGKKSAQKMAYSLCVENKFLGLNIAHAIENAALVVKKCNKC 64
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ ++ C IC+D R + +V + D++ +E Y VL + E
Sbjct: 65 LGLSESEICEICLDDTRQNGELCIVANSRDIFTIEEMGEFQGRYFVLDS------QQDLE 118
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK---GIDVKITRLAYGIPMG 180
I L RI+ + I E+IFA++ ++ + YI DK+K ++ +++A G+P G
Sbjct: 119 QIDFSLLNHRIQAESIHEIIFALTPSLANEAIMLYIEDKIKPPLDTPLQFSKIAQGVPTG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
LD +D ++ A+ SR L
Sbjct: 179 IGLDSIDQLSLLAALNSRVKL 199
>gi|224417864|ref|ZP_03655870.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491]
gi|253827203|ref|ZP_04870088.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491]
gi|313141407|ref|ZP_07803600.1| recombination protein [Helicobacter canadensis MIT 98-5491]
gi|253510609|gb|EES89268.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491]
gi|313130438|gb|EFR48055.1| recombination protein [Helicobacter canadensis MIT 98-5491]
Length = 190
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ L ++P G +SA R L + + +A + + ++ +C C + C
Sbjct: 11 LVESLEKLPSIGKKSAMRLAYFLAFEDKFSALQIAHNIEHCMQELRICEECFGISKEPVC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + R+ + ++ D++ LE S + Y V+ E + ++ L
Sbjct: 71 EICSNAMRNNGELCILTSPKDIFLLEESGEFHGKYFVITSL---------EALNLKLLEN 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
+I K+ E+IFA+S +++ + Y+ DKL +D++ T++A G+P G L+ +D +I
Sbjct: 122 KIIKDKVTEVIFALSPSLKSDSLMLYLEDKLSHLDLQFTKIAQGVPTGVSLENIDQLSII 181
Query: 193 EAIRSR 198
A++SR
Sbjct: 182 RALQSR 187
>gi|237750811|ref|ZP_04581291.1| recombination protein RecR [Helicobacter bilis ATCC 43879]
gi|229373256|gb|EEO23647.1| recombination protein RecR [Helicobacter bilis ATCC 43879]
Length = 178
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
L ++P G +SAR+ L + L +A+A+ + + C +CG + + C IC+
Sbjct: 3 LKKMPTIGKKSARKMAYTLAIENAPLGLQIAQAIHDCIATIEKCKVCGALSHGEICHICL 62
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D R + +V D++ +E + +Y V+ + LI+RI+
Sbjct: 63 DSTRKNGTLCIVSHPKDVFLIEDIGEFHGVYCVIEDY---------KHCDFTDLIQRIKD 113
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+ I E+IFA ++E +I +KL + +K +++A G+P LD +D ++ A
Sbjct: 114 ENIEEVIFAFMPSLESDIVVMFIQEKLADLCLKFSKIAQGVPSNVSLDNIDHFSLARAFN 173
Query: 197 SR 198
+R
Sbjct: 174 AR 175
>gi|227328732|ref|ZP_03832756.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 179
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 7 LESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRTFTEQ 66
Query: 70 DPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD I P
Sbjct: 67 DVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIWP 120
>gi|242308884|ref|ZP_04808039.1| recombination protein RecR [Helicobacter pullorum MIT 98-5489]
gi|239524548|gb|EEQ64414.1| recombination protein RecR [Helicobacter pullorum MIT 98-5489]
Length = 190
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L++ L ++P G +SA R L + + +A + + ++ +C C + C
Sbjct: 11 LVESLEKLPSIGKKSAMRLAYFLAFEDKLSALQIAHNIESCMQELRICEECFGISKEPIC 70
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + R+ + ++ +++ LE S N Y V+ SL LD +++L
Sbjct: 71 EICSNSMRNNGELCIIASPKEIFLLEESGEFNGKYFVIT-SLETLD--------MKALER 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
+I IRE+IFA+S ++ + Y+ DKL +D++ T++A G+P G L+ +D +I
Sbjct: 122 KIIKNNIREIIFALSPSLSSDSLMLYLEDKLSHLDLQFTKIAQGVPTGVSLENIDQLSII 181
Query: 193 EAIRSR 198
A++SR
Sbjct: 182 RALQSR 187
>gi|217033112|ref|ZP_03438575.1| hypothetical protein HPB128_8g3 [Helicobacter pylori B128]
gi|216945155|gb|EEC23848.1| hypothetical protein HPB128_8g3 [Helicobacter pylori B128]
Length = 162
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 34 HLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVAD 93
HL + L + A+ N + C+ C + ++ C IC D+ R S + +V D
Sbjct: 4 HLGLENPYLALKITHALENALENLKTCASCNALSESEICEICSDESRQNSQLCMVLHPRD 63
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
++ LE K Y+VL E++ +L +R+ + I+E+IFA T+
Sbjct: 64 VFILEDLKDFLGRYYVLNSI---------EEVDFNALEKRLIEENIKEIIFAFPPTLAND 114
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ YI DKL+ + T++A G+P G + +D ++ A SR
Sbjct: 115 SLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSR 159
>gi|255002972|ref|ZP_05277936.1| recombination protein RecR [Anaplasma marginale str. Puerto Rico]
gi|255004100|ref|ZP_05278901.1| recombination protein RecR [Anaplasma marginale str. Virginia]
Length = 67
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
K+R ++ A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ S
Sbjct: 4 KLR-VVVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSS 62
Query: 198 RTVL 201
R V+
Sbjct: 63 RYVI 66
>gi|254994838|ref|ZP_05277028.1| recombination protein RecR [Anaplasma marginale str. Mississippi]
Length = 65
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
K+R ++ A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ S
Sbjct: 2 KLR-VVVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSS 60
Query: 198 RTVL 201
R V+
Sbjct: 61 RYVI 64
>gi|227328733|ref|ZP_03832757.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 86
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
GP+DIG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+
Sbjct: 3 FGPDDIGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPV 62
Query: 180 GSELDYLDDGTIFEAIRSR 198
G EL+ +D T+ ++ R
Sbjct: 63 GGELEMVDGTTLSHSLAGR 81
>gi|256004008|ref|ZP_05428993.1| recombination protein RecR [Clostridium thermocellum DSM 2360]
gi|255991931|gb|EEU02028.1| recombination protein RecR [Clostridium thermocellum DSM 2360]
Length = 76
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L++RI+ ++E+I A + IEG+ TA YI +K + VK TR+A+GIP+G +L+Y
Sbjct: 2 IKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLEYA 61
Query: 187 DDGTIFEAIRSR 198
D+ T+ +A+ R
Sbjct: 62 DEVTLAKALEGR 73
>gi|193216550|ref|YP_001999792.1| recombination protein RecR [Mycoplasma arthritidis 158L3-1]
gi|193001873|gb|ACF07088.1| recombination protein RecR [Mycoplasma arthritidis 158L3-1]
Length = 196
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C N + + C IC D R+ + ++VVE+ + E ++ Y +L +P
Sbjct: 56 CLFCNNFSSQEKCEICSDSTRE-NKLMVVENAKTIKQFEVAQIYRGKYFILEALYNP--- 111
Query: 120 IGPEDIGIQSLIERIEV--KKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAY 175
++ +E++ + K E++ A+S TIEG T Y+ L+ + + +LA
Sbjct: 112 -KKPNLLFNKNLEKLLLIATKANEVVLALSPTIEGAITMDYLKKSLRDANNMHNVYQLAT 170
Query: 176 GIPMGSELDYLDDGTIFEAIRSRT 199
GIP+G ++Y+D T+ ++ +T
Sbjct: 171 GIPLGVNVEYIDSETLKQSFLKKT 194
>gi|213421304|ref|ZP_03354370.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 113
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115
D C IC + +R + I VVE AD++A+E++ + Y VL G LS
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLS 113
>gi|146321216|ref|YP_001200927.1| recombination protein [Streptococcus suis 98HAH33]
gi|145692022|gb|ABP92527.1| putative recombination protein [Streptococcus suis 98HAH33]
Length = 64
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
RE+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+ T+ AI +RT
Sbjct: 3 REVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRT 62
Query: 200 VL 201
L
Sbjct: 63 EL 64
>gi|167002257|ref|ZP_02268047.1| recombination protein RecR [Burkholderia mallei PRL-20]
gi|243062074|gb|EES44260.1| recombination protein RecR [Burkholderia mallei PRL-20]
Length = 59
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 143 IFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D GTI A+ R L
Sbjct: 1 MLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRTL 59
>gi|213422306|ref|ZP_03355372.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 72
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D T+
Sbjct: 1 QRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELEMVDGTTL 60
Query: 192 FEAIRSR 198
++ R
Sbjct: 61 SHSLAGR 67
>gi|270676254|ref|ZP_06222702.1| Recombination protein recR [Haemophilus influenzae HK1212]
gi|270316405|gb|EFA28301.1| Recombination protein recR [Haemophilus influenzae HK1212]
Length = 68
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+ E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D T+ +
Sbjct: 3 ESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFL 62
Query: 197 SR 198
R
Sbjct: 63 GR 64
>gi|301629102|ref|XP_002943687.1| PREDICTED: hypothetical protein LOC100490174 [Xenopus (Silurana)
tropicalis]
Length = 1629
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIE-GQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D +Q+L+ + K +S +I+ G+ TAH I + LK + +TRLA G+P+GSE
Sbjct: 1560 DPTVQALVREHDAK-------IVSGSIKPGEATAHAISETLKRRGLHVTRLARGVPVGSE 1612
Query: 183 LDYLDDGTIFEAIRSR 198
L+Y+D GTI A+ R
Sbjct: 1613 LEYVDLGTIAHALVDR 1628
>gi|308447539|ref|XP_003087455.1| hypothetical protein CRE_13870 [Caenorhabditis remanei]
gi|308255670|gb|EFO99622.1| hypothetical protein CRE_13870 [Caenorhabditis remanei]
Length = 427
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+++LI R+PG GP+SA+R H+++ + + LAE ++ + KV C +CGN+
Sbjct: 6 VQDLIDEFGRLPGIGPKSAQRIAFHILQTQNFDVSRLAELLSEVREKVRFCEVCGNI 62
>gi|19068176|gb|AAL58978.1| DNA repair and recombination protein [Mycoplasma gallisepticum]
Length = 75
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P S +DY D ++
Sbjct: 3 IKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYADSFSLKG 62
Query: 194 AIRSRTVL 201
A ++ ++
Sbjct: 63 AFENKQLI 70
>gi|270682533|ref|ZP_06222778.1| Recombination protein recR [Haemophilus influenzae HK1212]
gi|270316297|gb|EFA28230.1| Recombination protein recR [Haemophilus influenzae HK1212]
Length = 61
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D T+ + R
Sbjct: 1 MILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGR 57
>gi|42560607|ref|NP_975058.1| DNA repair protein RecR [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|42492103|emb|CAE76700.1| DNA REPAIR PROTEIN RecR [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
Length = 122
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
G +++ R + L+ K++L + + + C ICG + D C +C + R
Sbjct: 20 QGLTKKTSERLLVDLLINKDKL-NQFIDQLNKTKQLISTCKICGYLSENDKCLVCSLENR 78
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115
+ ++I +V + D +E + +YH+L G ++
Sbjct: 79 NQNIICIVSTILDAKNIENANKYKGVYHILNGEIN 113
>gi|301320767|gb|ADK69410.1| recombination protein RecR [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 119
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
G +++ R + L+ K++L + + + C ICG + D C +C + R
Sbjct: 17 QGLTKKTSERLLVDLLINKDKL-NQFIDQLNKTKQLISTCKICGYLSENDKCLVCSLENR 75
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115
+ ++I +V + D +E + +YH+L G ++
Sbjct: 76 NQNIICIVSTILDAKNIENANKYKGVYHILNGEIN 110
>gi|530446|emb|CAA83773.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 107
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD 81
G +++ R ++L+ K++L + + + C ICG + + C +C R+
Sbjct: 18 GLTKKTSERLLVNLLLNKDKL-DEFINQLNKVNQLISTCKICGYLSENNKCLVCSLDNRN 76
Query: 82 ASVIIVVEDVADLWALERSKAVNALYHVLGG 112
+ I +V + D +E + +YH+L G
Sbjct: 77 QNTICIVSTILDAKNIENANKYKGVYHILNG 107
>gi|254291481|ref|ZP_04962272.1| recombination protein RecR [Vibrio cholerae AM-19226]
gi|150422545|gb|EDN14501.1| recombination protein RecR [Vibrio cholerae AM-19226]
Length = 53
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+ ++ R
Sbjct: 1 MEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGR 49
>gi|254360629|ref|ZP_04976778.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
gi|153091169|gb|EDN73174.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
Length = 63
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
T +ENL++ L +PG GP+SA+R HL+++ L++A+ + + C C
Sbjct: 3 TSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALSKALNEAMSHIGHCKSC 60
>gi|329898077|ref|ZP_08272287.1| hypothetical protein IMCC3088_285 [gamma proteobacterium IMCC3088]
gi|328920976|gb|EGG28400.1| hypothetical protein IMCC3088_285 [gamma proteobacterium IMCC3088]
Length = 41
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 168 VKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
V +RLA G+PMG ELDY+D T+ +A+ R L
Sbjct: 7 VSASRLARGVPMGGELDYVDSSTLAQALSGRRPL 40
>gi|109120052|ref|XP_001114970.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Macaca
mulatta]
Length = 244
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERI---------- 134
++++ED LWA ER + + + G L+ +GPE +GI + I+R
Sbjct: 1 MVIIEDADSLWAQERENII--MNYEKGHRAGLLEDMGPESVGIYNNIDRFGIVHETELPP 58
Query: 135 ----EVKKIRELIFAISATIE--GQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E K++R I S +E GQ + +KL I R+ GIPM
Sbjct: 59 ATAREAKQMRREITRKSKWMEMLGQWETYKNSEKL------IDRVYKGIPMN 104
>gi|159477014|ref|XP_001696606.1| SGNH hydrolase [Chlamydomonas reinhardtii]
gi|158282831|gb|EDP08583.1| SGNH hydrolase [Chlamydomonas reinhardtii]
Length = 489
Score = 38.1 bits (87), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 109 VLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHY---IMDKLKG 165
V+GGS S DRIG +D+ L+ + R I AI+A + G ++A + +DK+
Sbjct: 60 VVGGSFSLPDRIGADDVWFSQLVRYLRATYPRANITAINAAV-GASSAGFGYLCLDKMLP 118
Query: 166 IDVKITRLAYG 176
+V + L YG
Sbjct: 119 PEVDLVFLDYG 129
>gi|333030550|ref|ZP_08458611.1| TonB family protein [Bacteroides coprosuis DSM 18011]
gi|332741147|gb|EGJ71629.1| TonB family protein [Bacteroides coprosuis DSM 18011]
Length = 275
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 113 SLSPLDRIGPEDI----GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV 168
S+SP+ +DI + ++ E +K ELI Y+ +KLK +
Sbjct: 25 SISPIQEYTDQDIEQLTALDTITEIAGLKNGEELI--------------YVKNKLKSV-- 68
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIR 196
R G+ +GS+LDY D+G +F IR
Sbjct: 69 --MRFKNGVQVGSQLDYYDNGQLFSHIR 94
>gi|255022652|ref|ZP_05294638.1| recombination protein RecR [Listeria monocytogenes FSL J1-208]
Length = 43
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
LK +K+TR+A+G+P+G +L+Y D+ T+ A+ R
Sbjct: 5 LKPSGIKVTRIAHGLPVGGDLEYADEVTLSXAMEGR 40
>gi|269861094|ref|XP_002650262.1| HIRA protein [Enterocytozoon bieneusi H348]
gi|220066313|gb|EED43800.1| HIRA protein [Enterocytozoon bieneusi H348]
Length = 407
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 39 KEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVE 89
K L P+ + NI+ K+ +C +C T+P I ++ D++V +VE
Sbjct: 337 KMDLHRPIDSWLKNIHQKILVCDVCKKKFVTEPILIYLENTLDSNVQFIVE 387
>gi|319761617|ref|YP_004125554.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Alicycliphilus
denitrificans BC]
gi|330823483|ref|YP_004386786.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Alicycliphilus
denitrificans K601]
gi|317116178|gb|ADU98666.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Alicycliphilus
denitrificans BC]
gi|329308855|gb|AEB83270.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Alicycliphilus
denitrificans K601]
Length = 350
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 43 LGP--LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERS 100
+GP +A+A + + C + G++ T A CI++ AS+ + + D D WA
Sbjct: 21 IGPEIVAKAFRDAPQDLRGCFVVGDLATLRRAAACIERPGQASLPVALLDSPDAWAQVPP 80
Query: 101 KAVNAL-YHVLGGSLSPLDRIGPE 123
+ + H L GSL+P ++ E
Sbjct: 81 RCLPVWQLHELAGSLAPWGQVSAE 104
Searching..................................................done
Results from round 2
>gi|289422930|ref|ZP_06424753.1| recombination protein RecR [Peptostreptococcus anaerobius 653-L]
gi|289156653|gb|EFD05295.1| recombination protein RecR [Peptostreptococcus anaerobius 653-L]
Length = 199
Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 127/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I+ LI +++PG G ++A+R H++ E + LA+A+ ++ ++ CS+C N
Sbjct: 4 YSEPIDRLINEFSKLPGVGRKTAQRLAFHVINMNENDVKGLAKALVDVKQEIKYCSVCCN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +D C IC + RDAS I VVED D+ A+ER+K N YHVL G +SPLD +GPE +
Sbjct: 64 ISDSDVCPICSNSHRDASTICVVEDPRDVAAMERTKDYNGKYHVLNGVISPLDGVGPEML 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ LI R+ +++ELI A + TIEG+ TA YI +K + VK+TR+A+G+P+G +L+Y
Sbjct: 124 NIKELISRLGDGQVKELIMATNPTIEGEATAMYISRLVKPMGVKVTRIAHGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
DD TI +A+ R +
Sbjct: 184 ADDVTISKALEGRREI 199
>gi|304315583|ref|YP_003850728.1| recombination protein RecR [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777085|gb|ADL67644.1| recombination protein RecR [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 199
Score = 324 bits (833), Expect = 3e-87, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 120/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI L+R+PG G ++A+R +++ + + L+ A+ N + C+ C
Sbjct: 2 NVYSRSLSRLIDELSRLPGIGRKTAQRLAFYILDMPKDDVINLSNAILEAKNNLKYCNKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N +D C IC D+ RD+S I VV D D+ A+E+++ LYHVL G +SP+D IGPE
Sbjct: 62 YNFTDSDLCNICSDETRDSSTICVVSDPKDVVAMEKTREYRGLYHVLHGVISPMDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ERI I+E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLERINNNDIKEIILATNPDIEGEATAMYIAKLIKPFGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R +
Sbjct: 182 EYTDSVTLSRALEGRREM 199
>gi|164686924|ref|ZP_02210952.1| hypothetical protein CLOBAR_00524 [Clostridium bartlettii DSM
16795]
gi|164604027|gb|EDQ97492.1| hypothetical protein CLOBAR_00524 [Clostridium bartlettii DSM
16795]
Length = 199
Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 127/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSIC
Sbjct: 2 QYYTEPISRLIEEFSKLPGIGKKTAQRLAFHVINMNNNDVEALSKAILDAKKEIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC++C + RD+SVI VVED D+ A+E+ + YHVL G +SP+D IGP+
Sbjct: 62 CNITDKDPCSMCSNPNRDSSVICVVEDPRDVAAMEKIREFKGQYHVLNGVISPMDGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I I+ LI+R+ + ++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L
Sbjct: 122 MINIKELIQRLGNQDVKEIIMATNPTIEGEATAMYIARLIKPMGIKVTRIAHGLPIGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI +A+ R +
Sbjct: 182 EYADEVTISKALEGRREI 199
>gi|210623908|ref|ZP_03294117.1| hypothetical protein CLOHIR_02068 [Clostridium hiranonis DSM 13275]
gi|210153272|gb|EEA84278.1| hypothetical protein CLOHIR_02068 [Clostridium hiranonis DSM 13275]
Length = 200
Score = 323 bits (830), Expect = 7e-87, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 131/198 (66%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ + I LI+ +++PG G ++A+R H+V + LA+A+ + ++ CSIC
Sbjct: 3 QVYTEPITRLIEEFSKLPGVGRKTAQRLAFHVVNMNNNDVEALAKAIVDAKREIRYCSIC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ TDPC++C ++ RD SVI VVED D+ A+ER+K N LYHVL G +SP+D +GP+
Sbjct: 63 CNITDTDPCSMCSNKNRDKSVICVVEDPRDVAAMERTKDYNGLYHVLHGVISPMDGVGPD 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I I+ L+ R+ + ++E+I A + T+EG+ TA YI +K + +K+TR+A+G+P+G +L
Sbjct: 123 MIKIKELLVRLSNQDVKEIIMATNPTVEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDL 182
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI +A+ R +
Sbjct: 183 EYADEVTISKALEGRREI 200
>gi|307243767|ref|ZP_07525904.1| recombination protein RecR [Peptostreptococcus stomatis DSM 17678]
gi|306492866|gb|EFM64882.1| recombination protein RecR [Peptostreptococcus stomatis DSM 17678]
Length = 199
Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I+ LI +++PG G ++A+R H++ + + L++A+ ++ N++ CS+C N
Sbjct: 4 YSEPIDRLINEFSKLPGIGRKTAQRLAFHVINMDIKDVTGLSKALVDVKNEIKYCSVCCN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T+ C IC + RD S I VVED D+ A+ER+K + YHVL G +SP+D IGP+ +
Sbjct: 64 ISDTEVCPICANSHRDPSTICVVEDPRDVAAMERTKDYSGRYHVLNGVISPMDGIGPDML 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ LI R+ ++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L+Y
Sbjct: 124 NIKELISRLGDGSVKEIIMATNPTIEGEATAMYISRLVKPMGIKVTRIAHGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
DD TI +A+ R +
Sbjct: 184 ADDVTISKALEGRREI 199
>gi|255304955|ref|ZP_05349129.1| recombination protein [Clostridium difficile ATCC 43255]
Length = 199
Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 131/198 (66%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSIC
Sbjct: 2 QVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKKEIRYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ TDPC++C ++ RD+SVI VVED D+ A+ER++ YHVL G +SP+D IGP+
Sbjct: 62 CNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ LI+R+ ++++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L
Sbjct: 122 MLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI +A+ R +
Sbjct: 182 EYADEVTISKALEGRREI 199
>gi|126697584|ref|YP_001086481.1| recombination protein [Clostridium difficile 630]
gi|254973668|ref|ZP_05270140.1| recombination protein [Clostridium difficile QCD-66c26]
gi|255091059|ref|ZP_05320537.1| recombination protein [Clostridium difficile CIP 107932]
gi|255099175|ref|ZP_05328152.1| recombination protein [Clostridium difficile QCD-63q42]
gi|255312713|ref|ZP_05354296.1| recombination protein [Clostridium difficile QCD-76w55]
gi|255515473|ref|ZP_05383149.1| recombination protein [Clostridium difficile QCD-97b34]
gi|255648565|ref|ZP_05395467.1| recombination protein [Clostridium difficile QCD-37x79]
gi|255654100|ref|ZP_05399509.1| recombination protein [Clostridium difficile QCD-23m63]
gi|260681787|ref|YP_003213072.1| recombination protein [Clostridium difficile CD196]
gi|260685384|ref|YP_003216517.1| recombination protein [Clostridium difficile R20291]
gi|296452475|ref|ZP_06894174.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP08]
gi|296878243|ref|ZP_06902253.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP07]
gi|306518694|ref|ZP_07405041.1| recombination protein RecR [Clostridium difficile QCD-32g58]
gi|123067140|sp|Q18CA2|RECR_CLOD6 RecName: Full=Recombination protein recR
gi|115249021|emb|CAJ66832.1| DNA repair and recombination protein [Clostridium difficile]
gi|260207950|emb|CBA60073.1| recombination protein [Clostridium difficile CD196]
gi|260211400|emb|CBE01475.1| recombination protein [Clostridium difficile R20291]
gi|296258681|gb|EFH05577.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP08]
gi|296430751|gb|EFH16588.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP07]
Length = 199
Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 131/198 (66%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSIC
Sbjct: 2 QVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ TDPC++C ++ RD+SVI VVED D+ A+ER++ YHVL G +SP+D IGP+
Sbjct: 62 CNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ LI+R+ ++++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G +L
Sbjct: 122 MLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI +A+ R +
Sbjct: 182 EYADEVTISKALEGRREI 199
>gi|308066976|ref|YP_003868581.1| Recombination protein recR [Paenibacillus polymyxa E681]
gi|305856255|gb|ADM68043.1| Recombination protein recR [Paenibacillus polymyxa E681]
Length = 199
Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats.
Identities = 84/197 (42%), Positives = 130/197 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI R+PG GP++A R H++K KE + A+A+ N+ + CS+CG
Sbjct: 2 YYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TDPC IC D+ RD SVI VV+D DL A+ER+K N YHVL G++SP++ IGPED
Sbjct: 62 NITDTDPCRICQDKTRDTSVICVVQDSKDLVAMERTKEFNGFYHVLHGAISPMEGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ L+ R+ ++++ELI A + IEG+ TA YI ++ ++K+TR+A+G+P+G +L+
Sbjct: 122 IKLKELLNRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKALEGRREL 198
>gi|296131620|ref|YP_003638867.1| recombination protein RecR [Thermincola sp. JR]
gi|296030198|gb|ADG80966.1| recombination protein RecR [Thermincola potens JR]
Length = 198
Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI+ A++PG GP++A+R H++ + LA+A+ N K+ CSIC
Sbjct: 2 YYAEPVARLIEEFAKLPGIGPKTAQRLAFHILNSDAESAHGLAKALINAKQKIRYCSICS 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TDPC +C D RD + I VVE D+ A+ER++ LYHVL G++SP+D IGPE
Sbjct: 62 NLTDTDPCKLCQDSTRDRNTICVVEQARDVVAIERTREYKGLYHVLHGAISPMDGIGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ER++ ++E+I A + IEG+ TA Y+ LK + V++TR+A+G+P+G +L+
Sbjct: 122 LKIKELLERLQKNSVQEIILATNPNIEGEATAMYLARLLKPMGVRVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A R +
Sbjct: 182 YADEVTLSKAFEGRREM 198
>gi|332980767|ref|YP_004462208.1| DNA replication and repair protein RecR [Mahella australiensis 50-1
BON]
gi|332698445|gb|AEE95386.1| DNA replication and repair protein RecR [Mahella australiensis 50-1
BON]
Length = 199
Score = 320 bits (822), Expect = 6e-86, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 127/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI L+++PG GP++A+R +++ + + LA+++ + +K+ CSIC
Sbjct: 2 NYYAEPISRLINELSKLPGIGPKTAQRLAFYMLHMPKDAVHTLAQSINDARDKIIYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN+ DPCAIC RD S I VVE D+ A+E+++ N LYHVL G++SP+D +GP+
Sbjct: 62 GNLTDVDPCAICSSSTRDNSTICVVESPTDVVAMEKTRGYNGLYHVLHGAISPIDGVGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ +++E+I A + ++EG+ TA YI LK + K+TR+A GIP+G +L
Sbjct: 122 DIRIKELLTRLRDSQVKEVILATNPSVEGEATALYISRMLKPMGFKVTRIANGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI A+ R +
Sbjct: 182 EYADEVTITRALEGRREM 199
>gi|299820911|ref|ZP_07052800.1| recombination protein R [Listeria grayi DSM 20601]
gi|299817932|gb|EFI85167.1| recombination protein R [Listeria grayi DSM 20601]
Length = 204
Score = 320 bits (822), Expect = 6e-86, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 124/200 (62%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
K + I L+ ++PG GP+SA R +++ KE + A+A+ + + CS
Sbjct: 5 NKMHYPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLGFAKALVDAKRNLSFCS 64
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+CG++ DPC IC D RD V+ VVE+ D+ A+E+ + + LYHVL G++SP+D IG
Sbjct: 65 VCGHITEQDPCYICADTTRDQHVVCVVEEPRDVIAMEKMRDYHGLYHVLHGTISPMDGIG 124
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PEDI I LI+R++ I+E+I A + +EG+ TA YI +K +K+TR+A+G+P+G
Sbjct: 125 PEDINIPDLIKRLQDDTIQEVILATNPNVEGEATAMYISRLIKPSGIKVTRIAHGLPVGG 184
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ +A+ R L
Sbjct: 185 DLEYADEVTLSKALEGRREL 204
>gi|125974629|ref|YP_001038539.1| recombination protein RecR [Clostridium thermocellum ATCC 27405]
gi|281419177|ref|ZP_06250194.1| recombination protein RecR [Clostridium thermocellum JW20]
gi|171769989|sp|A3DHB7|RECR_CLOTH RecName: Full=Recombination protein recR
gi|125714854|gb|ABN53346.1| recombination protein RecR [Clostridium thermocellum ATCC 27405]
gi|281407326|gb|EFB37587.1| recombination protein RecR [Clostridium thermocellum JW20]
gi|316941747|gb|ADU75781.1| recombination protein RecR [Clostridium thermocellum DSM 1313]
Length = 199
Score = 320 bits (821), Expect = 7e-86, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I LI+ ++PG G ++A+R +++ ++ + LA A+ K CS+CG
Sbjct: 3 FYAAPIARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSVCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TD C +C ++RD+SVI VVED D+ A+E+ + LYHVL G++SP+ IGPED
Sbjct: 63 NLTDTDVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L++RI+ ++E+I A + IEG+ TA YI +K + VK TR+A+GIP+G +L+
Sbjct: 123 IKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R +
Sbjct: 183 YADEVTLAKALEGRREI 199
>gi|229542241|ref|ZP_04431301.1| recombination protein RecR [Bacillus coagulans 36D1]
gi|229326661|gb|EEN92336.1| recombination protein RecR [Bacillus coagulans 36D1]
Length = 198
Score = 320 bits (821), Expect = 7e-86, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L++ ++PG GP++A R ++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLMESFMKLPGIGPKTAARLAFFVLDMKEDSVLAFAKALVDAKRDLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D +RD SVI VVE+ D+ A+E+ K N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDTDPCYICADPRRDRSVICVVEEPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 SVPDLLKRLRDETVQEVILATNPNIEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREI 198
>gi|56418554|ref|YP_145872.1| recombination protein RecR [Geobacillus kaustophilus HTA426]
gi|297528394|ref|YP_003669669.1| recombination protein RecR [Geobacillus sp. C56-T3]
gi|73621486|sp|Q5L3X4|RECR_GEOKA RecName: Full=Recombination protein recR
gi|56378396|dbj|BAD74304.1| DNA repair and genetic recombination protein [Geobacillus
kaustophilus HTA426]
gi|297251646|gb|ADI25092.1| recombination protein RecR [Geobacillus sp. C56-T3]
Length = 198
Score = 319 bits (820), Expect = 1e-85, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG+
Sbjct: 3 YPEPLSKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D++RD + I VV+D D+ A+ER K N LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMERMKEYNGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R++ + ++E+I A IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIAELLTRLQDETVQEVILATDPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|16077089|ref|NP_387902.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
168]
gi|221307830|ref|ZP_03589677.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
168]
gi|221312152|ref|ZP_03593957.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317085|ref|ZP_03598379.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321348|ref|ZP_03602642.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str.
SMY]
gi|296332938|ref|ZP_06875396.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305672719|ref|YP_003864390.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
str. W23]
gi|321313689|ref|YP_004205976.1| recombination protein RecR [Bacillus subtilis BSn5]
gi|585801|sp|P24277|RECR_BACSU RecName: Full=Recombination protein recR
gi|453239|emb|CAA34879.1| recR [Bacillus subtilis]
gi|467411|dbj|BAA05257.1| recombination protein [Bacillus subtilis]
gi|2632288|emb|CAB11797.1| DNA repair and recombination protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|291482391|dbj|BAI83466.1| recombination protein RecR [Bacillus subtilis subsp. natto BEST195]
gi|296149902|gb|EFG90793.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305410962|gb|ADM36080.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii
str. W23]
gi|320019963|gb|ADV94949.1| recombination protein RecR [Bacillus subtilis BSn5]
Length = 198
Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE ++ A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD SVI VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y
Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|154684540|ref|YP_001419701.1| recombination protein RecR [Bacillus amyloliquefaciens FZB42]
gi|308171913|ref|YP_003918618.1| DNA repair and recombination protein [Bacillus amyloliquefaciens
DSM 7]
gi|166221921|sp|A7Z0E4|RECR_BACA2 RecName: Full=Recombination protein recR
gi|154350391|gb|ABS72470.1| RecR [Bacillus amyloliquefaciens FZB42]
gi|307604777|emb|CBI41148.1| DNA repair and recombination protein [Bacillus amyloliquefaciens
DSM 7]
gi|328551722|gb|AEB22214.1| recombination protein RecR [Bacillus amyloliquefaciens TA208]
gi|328909982|gb|AEB61578.1| Recombination protein recR [Bacillus amyloliquefaciens LL3]
Length = 198
Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CSICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD SVI VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y
Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|212637868|ref|YP_002314388.1| recombination protein RecR [Anoxybacillus flavithermus WK1]
gi|226737870|sp|B7GFF3|RECR_ANOFW RecName: Full=Recombination protein recR
gi|212559348|gb|ACJ32403.1| Recombinational DNA repair protein RecR [Anoxybacillus flavithermus
WK1]
Length = 198
Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG GP++A R ++ KE ++ A+A+ N + CS CG
Sbjct: 2 YYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLNMKEDVVLDFAKALVNAKRNLTYCSSCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ DPC IC D +RD S+I VV+D D+ A+E+ K N LYHVL G++SP++ IGPED
Sbjct: 62 HITDKDPCYICEDDKRDRSIICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I L+ R++ + ++E+I A + IEG+ TA YI LK VKITR+A+G+P+G +L+
Sbjct: 122 IKIAELLRRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGVKITRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKALEGRREL 198
>gi|261417518|ref|YP_003251200.1| recombination protein RecR [Geobacillus sp. Y412MC61]
gi|319765176|ref|YP_004130677.1| recombination protein RecR [Geobacillus sp. Y412MC52]
gi|261373975|gb|ACX76718.1| recombination protein RecR [Geobacillus sp. Y412MC61]
gi|317110042|gb|ADU92534.1| recombination protein RecR [Geobacillus sp. Y412MC52]
Length = 198
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG+
Sbjct: 3 YPEPLSKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D++RD + I VV+D D+ A+ER K N LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMERMKEYNGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R++ + I+E+I A IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIAELLTRLQDETIQEVILATDPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|295402710|ref|ZP_06812652.1| recombination protein RecR [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109171|ref|YP_003987487.1| recombination protein RecR [Geobacillus sp. Y4.1MC1]
gi|294975241|gb|EFG50877.1| recombination protein RecR [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214272|gb|ADP72876.1| recombination protein RecR [Geobacillus sp. Y4.1MC1]
Length = 198
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ + + C+ICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLTMKEDTVLEFAKALVDAKRNIRYCTICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D++RD + I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIAELLKRLQDEAVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|52078516|ref|YP_077307.1| recombination protein RecR [Bacillus licheniformis ATCC 14580]
gi|52783879|ref|YP_089708.1| recombination protein RecR [Bacillus licheniformis ATCC 14580]
gi|319648544|ref|ZP_08002759.1| recombination protein recR [Bacillus sp. BT1B_CT2]
gi|73621462|sp|Q65PJ9|RECR_BACLD RecName: Full=Recombination protein recR
gi|52001727|gb|AAU21669.1| DNA repair protein RecR [Bacillus licheniformis ATCC 14580]
gi|52346381|gb|AAU39015.1| RecR [Bacillus licheniformis ATCC 14580]
gi|317389392|gb|EFV70204.1| recombination protein recR [Bacillus sp. BT1B_CT2]
Length = 198
Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE ++ A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMKEDVVLDFAKALVNAKRNLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y
Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREM 198
>gi|297543596|ref|YP_003675898.1| recombination protein RecR [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841371|gb|ADH59887.1| recombination protein RecR [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 199
Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ LI+ L+++PG GP++A+R ++ + + L++++ + K+ C IC
Sbjct: 3 YYSASLAKLIEELSKLPGIGPKTAQRLAFFIINMPTEEVKSLSQSIIDAKEKIKYCKICY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ IGPED
Sbjct: 63 NITDTEVCNICSDEERDNSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGIGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L++R++ ++E+I A + IEG+ TA YI LK + VK+TR+A+G+P+G +L+
Sbjct: 123 IKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGVKVTRIAHGVPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R L
Sbjct: 183 YTDVVTLSRALEGRREL 199
>gi|16804739|ref|NP_466224.1| recombination protein RecR [Listeria monocytogenes EGD-e]
gi|46908881|ref|YP_015270.1| recombination protein RecR [Listeria monocytogenes serotype 4b str.
F2365]
gi|47095509|ref|ZP_00233118.1| recombination protein RecR [Listeria monocytogenes str. 1/2a F6854]
gi|217966100|ref|YP_002351778.1| recombination protein RecR [Listeria monocytogenes HCC23]
gi|224499377|ref|ZP_03667726.1| recombination protein RecR [Listeria monocytogenes Finland 1988]
gi|224502888|ref|ZP_03671195.1| recombination protein RecR [Listeria monocytogenes FSL R2-561]
gi|226225254|ref|YP_002759361.1| recombination protein recR [Listeria monocytogenes Clip81459]
gi|254824933|ref|ZP_05229934.1| recombination protein RecR [Listeria monocytogenes FSL J1-194]
gi|254827267|ref|ZP_05231954.1| recombination protein RecR [Listeria monocytogenes FSL N3-165]
gi|254830862|ref|ZP_05235517.1| recombination protein RecR [Listeria monocytogenes 10403S]
gi|254851993|ref|ZP_05241341.1| recombination protein RecR [Listeria monocytogenes FSL R2-503]
gi|254899841|ref|ZP_05259765.1| recombination protein RecR [Listeria monocytogenes J0161]
gi|254912953|ref|ZP_05262965.1| recombination protein RecR [Listeria monocytogenes J2818]
gi|254931026|ref|ZP_05264385.1| recombination protein RecR [Listeria monocytogenes HPB2262]
gi|254937334|ref|ZP_05269031.1| recombination protein RecR [Listeria monocytogenes F6900]
gi|254993824|ref|ZP_05276014.1| recombination protein RecR [Listeria monocytogenes FSL J2-064]
gi|255025784|ref|ZP_05297770.1| recombination protein RecR [Listeria monocytogenes FSL J2-003]
gi|255520361|ref|ZP_05387598.1| recombination protein RecR [Listeria monocytogenes FSL J1-175]
gi|284800412|ref|YP_003412277.1| recombination protein RecR [Listeria monocytogenes 08-5578]
gi|284993598|ref|YP_003415366.1| recombination protein RecR [Listeria monocytogenes 08-5923]
gi|290891884|ref|ZP_06554881.1| recombination protein RecR [Listeria monocytogenes FSL J2-071]
gi|300763538|ref|ZP_07073536.1| recombination protein RecR [Listeria monocytogenes FSL N1-017]
gi|315283984|ref|ZP_07871984.1| recombination protein RecR [Listeria marthii FSL S4-120]
gi|20139467|sp|Q8Y3X7|RECR_LISMO RecName: Full=Recombination protein recR
gi|67461443|sp|Q71W69|RECR_LISMF RecName: Full=Recombination protein recR
gi|254790773|sp|B8DAT9|RECR_LISMH RecName: Full=Recombination protein recR
gi|259563700|sp|C1KZQ7|RECR_LISMC RecName: Full=Recombination protein recR
gi|16412202|emb|CAD00915.1| recR [Listeria monocytogenes EGD-e]
gi|46882154|gb|AAT05447.1| recombination protein RecR [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016119|gb|EAL07043.1| recombination protein RecR [Listeria monocytogenes str. 1/2a F6854]
gi|217335370|gb|ACK41164.1| recombination protein RecR [Listeria monocytogenes HCC23]
gi|225877716|emb|CAS06430.1| Putative recombination protein recR [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258599649|gb|EEW12974.1| recombination protein RecR [Listeria monocytogenes FSL N3-165]
gi|258605291|gb|EEW17899.1| recombination protein RecR [Listeria monocytogenes FSL R2-503]
gi|258609940|gb|EEW22548.1| recombination protein RecR [Listeria monocytogenes F6900]
gi|284055974|gb|ADB66915.1| recombination protein RecR [Listeria monocytogenes 08-5578]
gi|284059065|gb|ADB70004.1| recombination protein RecR [Listeria monocytogenes 08-5923]
gi|290558478|gb|EFD91995.1| recombination protein RecR [Listeria monocytogenes FSL J2-071]
gi|293582572|gb|EFF94604.1| recombination protein RecR [Listeria monocytogenes HPB2262]
gi|293590954|gb|EFF99288.1| recombination protein RecR [Listeria monocytogenes J2818]
gi|293594173|gb|EFG01934.1| recombination protein RecR [Listeria monocytogenes FSL J1-194]
gi|300515815|gb|EFK42864.1| recombination protein RecR [Listeria monocytogenes FSL N1-017]
gi|307572290|emb|CAR85469.1| recombination protein [Listeria monocytogenes L99]
gi|313612374|gb|EFR86516.1| recombination protein RecR [Listeria marthii FSL S4-120]
gi|328468182|gb|EGF39188.1| recombination protein RecR [Listeria monocytogenes 1816]
gi|328469562|gb|EGF40503.1| recombination protein RecR [Listeria monocytogenes 220]
gi|332313133|gb|EGJ26228.1| Recombination protein recR [Listeria monocytogenes str. Scott A]
Length = 198
Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats.
Identities = 77/195 (39%), Positives = 122/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP+SA R +++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I E+I A + +EG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKAMEGRRE 197
>gi|224475613|ref|YP_002633219.1| recombination protein RecR [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254790783|sp|B9DLF7|RECR_STACT RecName: Full=Recombination protein recR
gi|222420220|emb|CAL27034.1| putative recombination protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 198
Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats.
Identities = 85/196 (43%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITEEDPCYICNDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPSLIERLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI RT +
Sbjct: 183 ADEVTLSRAIEGRTEM 198
>gi|167038578|ref|YP_001666156.1| recombination protein RecR [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116973|ref|YP_004187132.1| recombination protein RecR [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326390314|ref|ZP_08211873.1| recombination protein RecR [Thermoanaerobacter ethanolicus JW 200]
gi|229470344|sp|B0K800|RECR_THEP3 RecName: Full=Recombination protein recR
gi|166857412|gb|ABY95820.1| recombination protein RecR [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319930064|gb|ADV80749.1| recombination protein RecR [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|325993591|gb|EGD52024.1| recombination protein RecR [Thermoanaerobacter ethanolicus JW 200]
Length = 199
Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 123/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI+ L+++PG GP++A+R ++ + + L++A+ + K+ C IC
Sbjct: 2 NYYSTSIAKLIEELSKLPGIGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GPE
Sbjct: 62 YNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L++R++ ++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R L
Sbjct: 182 EYTDVVTLSRALEGRREL 199
>gi|167038709|ref|YP_001661694.1| recombination protein RecR [Thermoanaerobacter sp. X514]
gi|256751421|ref|ZP_05492299.1| recombination protein RecR [Thermoanaerobacter ethanolicus CCSD1]
gi|300913732|ref|ZP_07131049.1| recombination protein RecR [Thermoanaerobacter sp. X561]
gi|307723252|ref|YP_003903003.1| recombination protein RecR [Thermoanaerobacter sp. X513]
gi|229470345|sp|B0K101|RECR_THEPX RecName: Full=Recombination protein recR
gi|166852949|gb|ABY91358.1| recombination protein RecR [Thermoanaerobacter sp. X514]
gi|256749640|gb|EEU62666.1| recombination protein RecR [Thermoanaerobacter ethanolicus CCSD1]
gi|300890417|gb|EFK85562.1| recombination protein RecR [Thermoanaerobacter sp. X561]
gi|307580313|gb|ADN53712.1| recombination protein RecR [Thermoanaerobacter sp. X513]
Length = 199
Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 123/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI+ L+++PG GP++A+R ++ + + L++A+ + K+ C IC
Sbjct: 2 NYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GPE
Sbjct: 62 YNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L++R++ ++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R L
Sbjct: 182 EYTDVVTLSRALEGRREL 199
>gi|20806579|ref|NP_621750.1| recombinational DNA repair protein [Thermoanaerobacter
tengcongensis MB4]
gi|24212232|sp|Q8RDI4|RECR_THETN RecName: Full=Recombination protein recR
gi|20515021|gb|AAM23354.1| Recombinational DNA repair protein [Thermoanaerobacter
tengcongensis MB4]
Length = 199
Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ LI+ L+++PG GP++A+R ++ + L++A+ K+ C IC
Sbjct: 3 YYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D+ RD S I VV D+ A+E+ K +YHVL G +SP++ +GPED
Sbjct: 63 NITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L+ER+ ++E+I A + IEG+ TA YI LK VK+TR+A+GIP+G +L+
Sbjct: 123 IRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTV 200
Y D T+ +A+ R
Sbjct: 183 YTDVVTLSKALEGRRE 198
>gi|311070668|ref|YP_003975591.1| recombination protein RecR [Bacillus atrophaeus 1942]
gi|310871185|gb|ADP34660.1| recombination protein RecR [Bacillus atrophaeus 1942]
Length = 198
Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE ++ A+A+ N + CSICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD S+I VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDTRRDKSIICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y
Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREM 198
>gi|23097486|ref|NP_690952.1| recombination protein RecR [Oceanobacillus iheyensis HTE831]
gi|33301529|sp|Q8EU58|RECR_OCEIH RecName: Full=Recombination protein recR
gi|22775709|dbj|BAC11987.1| recombination protein (DNA repair and genetic recombination)
[Oceanobacillus iheyensis HTE831]
Length = 198
Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 122/195 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG GP++A R ++ KE + A A+ + ++ CS+CG
Sbjct: 2 YYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ DPCAIC D RD S+I VV+D D+ A+E+ K + YHVL G++SP+D IGPED
Sbjct: 62 HITDQDPCAICTDTSRDGSLICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + LI R++ +++ ELI A + IEG+ TA YI +K ++ TR+A+G+P+G +L+
Sbjct: 122 INVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ +A+ R
Sbjct: 182 YADEVTLSKALEGRR 196
>gi|323705218|ref|ZP_08116794.1| recombination protein RecR [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535644|gb|EGB25419.1| recombination protein RecR [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 199
Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 119/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI L+R+PG G ++A+R +++ + L+ A+ N + C C
Sbjct: 2 NVYSRSLSRLIDELSRLPGIGRKTAQRLAFYILDMPLDDVVNLSNAILEAKNNLRYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N ++ C+IC D+ RD I VV D D+ A+E+++ LYHVL G++SP+D IGPE
Sbjct: 62 YNFTDSELCSICSDETRDTHTICVVSDPKDVVAMEKTREYRGLYHVLHGAISPMDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ERI+ +I E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLERIKDAEINEIILATNPDIEGEATAMYIAKLIKPFGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R +
Sbjct: 182 EYTDSVTLSRALEGRREM 199
>gi|226309653|ref|YP_002769547.1| recombination protein RecR [Brevibacillus brevis NBRC 100599]
gi|254790755|sp|C0ZHA2|RECR_BREBN RecName: Full=Recombination protein recR
gi|226092601|dbj|BAH41043.1| recombination protein RecR [Brevibacillus brevis NBRC 100599]
Length = 198
Score = 317 bits (814), Expect = 5e-85, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI ++PG GP++A R ++ KE + LA+A+ N ++ CS+C
Sbjct: 2 FYPEPVSKLIDGFMKLPGIGPKTAGRLAFFVLNMKEDDVLDLAKALVNAKRQLHYCSVCN 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D++RD S+I VV++ D+ A+E+++ YHVL G++SP+D IGPED
Sbjct: 62 NITDLDPCHICRDKRRDGSIICVVQEPRDVVAMEKTREFEGYYHVLHGAISPMDGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I L++R+ ++++E+I A + IEG+ TA YI +K +++TR+A+G+P+G +L+
Sbjct: 122 IRIPDLLKRLGDEQVKEVILATNPNIEGEATAMYISRLIKPFGIRVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLTKALEGRRDL 198
>gi|239825605|ref|YP_002948229.1| recombination protein RecR [Geobacillus sp. WCH70]
gi|259563698|sp|C5D347|RECR_GEOSW RecName: Full=Recombination protein recR
gi|239805898|gb|ACS22963.1| recombination protein RecR [Geobacillus sp. WCH70]
Length = 198
Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 127/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+++ ++ + C++CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAIRLAFFVLTMKEDTVLEFAKSLVDVKRNIRYCTVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D++RD + I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIAELLKRLQDEAVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|319655050|ref|ZP_08009120.1| recombination protein RecR [Bacillus sp. 2_A_57_CT2]
gi|317393274|gb|EFV74042.1| recombination protein RecR [Bacillus sp. 2_A_57_CT2]
Length = 198
Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 124/195 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLSYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC DQ+RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDQRRDRSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI +K +K TR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDETVQEIILATNPNIEGEATAMYISRLIKPSGIKATRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|319891432|ref|YP_004148307.1| Recombination protein RecR [Staphylococcus pseudintermedius
HKU10-03]
gi|317161128|gb|ADV04671.1| Recombination protein RecR [Staphylococcus pseudintermedius
HKU10-03]
gi|323465398|gb|ADX77551.1| recombination protein RecR [Staphylococcus pseudintermedius ED99]
Length = 198
Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats.
Identities = 82/196 (41%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPQPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD S+I VVED D+ A+E+ K LYHVL G++SP+D IGPEDI
Sbjct: 63 ITEQDPCYICEDKQRDRSMICVVEDDKDVIAMEKMKEYKGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL+ER++ + ++ELI A++ +EG++TA YI +K + +++TRLA G+ +G +L+Y
Sbjct: 123 NIPSLVERLKDEGVKELILAMNPNLEGESTAMYISRLVKPLGIRVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI RT +
Sbjct: 183 ADEVTLSRAISGRTEM 198
>gi|157691311|ref|YP_001485773.1| recombination protein RecR [Bacillus pumilus SAFR-032]
gi|194018063|ref|ZP_03056668.1| recombination protein RecR [Bacillus pumilus ATCC 7061]
gi|166918736|sp|A8FAE6|RECR_BACP2 RecName: Full=Recombination protein recR
gi|157680069|gb|ABV61213.1| recombination protein RecR [Bacillus pumilus SAFR-032]
gi|194010255|gb|EDW19832.1| recombination protein RecR [Bacillus pumilus ATCC 7061]
Length = 198
Score = 316 bits (812), Expect = 8e-85, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ +E ++ A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMQEDVVLDFAKALVNAKRNLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDTRRDQSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y
Sbjct: 123 KIPDLLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREM 198
>gi|15612599|ref|NP_240902.1| recombination protein RecR [Bacillus halodurans C-125]
gi|20139779|sp|Q9KGM3|RECR_BACHD RecName: Full=Recombination protein recR
gi|10172648|dbj|BAB03755.1| DNA repair and genetic recombination [Bacillus halodurans C-125]
Length = 198
Score = 316 bits (812), Expect = 9e-85, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 128/196 (65%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ R+PG GP++A R +++ KE + A+A+ N+ K+ CS+C N
Sbjct: 3 YPEPIAKLIEGFMRLPGIGPKTASRLAFFVLEMKEDDVLDFAKALVNVKRKLTYCSVCHN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D +RD SVI VV+D D+ A+E+ K + YHVL G++SP+D IGPEDI
Sbjct: 63 ITDTDPCRICEDSKRDESVICVVQDAKDVIAMEKMKEYHGKYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R++ I+E+I A + TIEG+ TA YI +K +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIPELIKRLQDDTIQEVIVATNPTIEGEATAMYISRLVKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKAMEGRREL 198
>gi|310639623|ref|YP_003944381.1| recombination protein recr [Paenibacillus polymyxa SC2]
gi|309244573|gb|ADO54140.1| Recombination protein RecR [Paenibacillus polymyxa SC2]
Length = 199
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 85/196 (43%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG GP++A R H++K KE + A+A+ N+ + CS+CGN
Sbjct: 3 YPEPIAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D+ RDASVI VV+D DL A+ER+K LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDTDPCRICQDKTRDASVICVVQDAKDLVAMERTKEFEGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R+ ++++ELI A + IEG+ TA YI ++ ++K+TR+A+G+P+G +L+Y
Sbjct: 123 KLKELLTRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|158321872|ref|YP_001514379.1| recombination protein RecR [Alkaliphilus oremlandii OhILAs]
gi|166918735|sp|A8MKQ1|RECR_ALKOO RecName: Full=Recombination protein recR
gi|158142071|gb|ABW20383.1| recombination protein RecR [Alkaliphilus oremlandii OhILAs]
Length = 199
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 118/198 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI+ ++PG G ++A+R H++ Q LA+A+ + C +C
Sbjct: 2 NYYSASISQLIEEFTKLPGIGRKTAQRLAFHVINMPIQDAHNLADAIVKAKENIKYCKVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC D++RD +I VVED D+ A+ER+K YHVL G++SPL+ IGPE
Sbjct: 62 TNLTDQEVCNICSDERRDPLLICVVEDPRDVVAMERTKEFKGYYHVLHGAISPLEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ + E+I A + IEG+ TA Y+ LK + +K++R+A+GIP+G +L
Sbjct: 122 DIKIKELLVRLSAQSADEVIIATNPNIEGEATAMYLSKLLKPMGIKVSRIAHGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 182 EYADEVTLTKALEGRREI 199
>gi|138893697|ref|YP_001124150.1| recombination protein RecR [Geobacillus thermodenitrificans NG80-2]
gi|196251183|ref|ZP_03149858.1| recombination protein RecR [Geobacillus sp. G11MC16]
gi|166221942|sp|A4IJA1|RECR_GEOTN RecName: Full=Recombination protein recR
gi|134265210|gb|ABO65405.1| RecR [Geobacillus thermodenitrificans NG80-2]
gi|196209309|gb|EDY04093.1| recombination protein RecR [Geobacillus sp. G11MC16]
Length = 198
Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 127/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D++RD ++I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDTDPCYICKDERRDRTMICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R++ + I+E+I A IEG+ TA Y+ LK +KITR+A+G+P+G +L+Y
Sbjct: 123 KIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLLKPTGIKITRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|254478345|ref|ZP_05091724.1| recombination protein RecR [Carboxydibrachium pacificum DSM 12653]
gi|214035703|gb|EEB76398.1| recombination protein RecR [Carboxydibrachium pacificum DSM 12653]
Length = 199
Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ LI+ L+++PG GP++A+R ++ + L++A+ K+ C IC
Sbjct: 3 YYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D+ RD S I VV D+ A+E+ K +YHVL G +SP++ +GPED
Sbjct: 63 NIADKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L+ER+ ++E+I A + IEG+ TA YI LK VK+TR+A+GIP+G +L+
Sbjct: 123 IRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTV 200
Y D T+ +A+ R
Sbjct: 183 YTDVVTLSKALEGRRE 198
>gi|315305096|ref|ZP_07875119.1| recombination protein RecR [Listeria ivanovii FSL F6-596]
gi|313626537|gb|EFR95647.1| recombination protein RecR [Listeria ivanovii FSL F6-596]
Length = 198
Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 122/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD S+I VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDKDPCYICADTSRDQSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I E+I A + +EG+ TA YI LK +KITR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKAMEGRRE 197
>gi|116874069|ref|YP_850850.1| recombination protein RecR [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461474|sp|A0AM39|RECR_LISW6 RecName: Full=Recombination protein recR
gi|116742947|emb|CAK22071.1| recombination protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 198
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 122/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDKDPCYICSDTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I E+I A + +EG+ TA YI L+ +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKAMEGRRE 197
>gi|205371941|ref|ZP_03224760.1| recombination protein RecR [Bacillus coahuilensis m4-4]
gi|205372025|ref|ZP_03224843.1| recombination protein RecR [Bacillus coahuilensis m4-4]
Length = 198
Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPITKLIDSFMKLPGIGPKTAARLAFFVLNMKEDTVLEFAKALVNAKRNLGYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RDAS+I VV+D D+ A+E+ K YHVL G++SP++ IGPEDI
Sbjct: 63 ITDQDPCYICQDDKRDASIICVVQDPKDVIAMEKMKEFRGKYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R++ ++++E+I A + IEG+ TA YI LK ++ITR+A+G+P+G +L+Y
Sbjct: 123 NVPDLLKRLQNEEVQEVILATNPNIEGEATAMYISRLLKPAGIRITRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRRDI 198
>gi|73663585|ref|YP_302366.1| recombination protein RecR [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123641631|sp|Q49UY9|RECR_STAS1 RecName: Full=Recombination protein recR
gi|72496100|dbj|BAE19421.1| recombinational DNA repair protein [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 198
Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 130/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSECGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITEQDPCYICQDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI R++ ++++ELI A++ +EG++TA YI +K I + +TRLA G+ +G +L+Y
Sbjct: 123 NIPSLINRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGITVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIMGRTEM 198
>gi|223043449|ref|ZP_03613495.1| recombination protein RecR [Staphylococcus capitis SK14]
gi|314935110|ref|ZP_07842469.1| recombination protein RecR [Staphylococcus caprae C87]
gi|222443238|gb|EEE49337.1| recombination protein RecR [Staphylococcus capitis SK14]
gi|313653040|gb|EFS16803.1| recombination protein RecR [Staphylococcus caprae C87]
Length = 198
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICQDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPALVERLKSDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|289551724|ref|YP_003472628.1| Recombination protein RecR [Staphylococcus lugdunensis HKU09-01]
gi|315660108|ref|ZP_07912966.1| recombination protein R [Staphylococcus lugdunensis M23590]
gi|289181255|gb|ADC88500.1| Recombination protein RecR [Staphylococcus lugdunensis HKU09-01]
gi|315495009|gb|EFU83346.1| recombination protein R [Staphylococcus lugdunensis M23590]
Length = 198
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 85/196 (43%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLNMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD +VI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRTVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPSLIERLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|89100951|ref|ZP_01173797.1| recombination protein RecR [Bacillus sp. NRRL B-14911]
gi|89084322|gb|EAR63477.1| recombination protein RecR [Bacillus sp. NRRL B-14911]
Length = 198
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 124/195 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLSYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC DQ+RD SVI V++D D+ A+E+ K N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDQRRDRSVICVLQDPKDVIAMEKMKEFNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + + E+I A + IEG+ TA YI LK +KITR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDETVEEVILATNPNIEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|16801910|ref|NP_472178.1| recombination protein RecR [Listeria innocua Clip11262]
gi|20139521|sp|Q927D9|RECR_LISIN RecName: Full=Recombination protein recR
gi|16415385|emb|CAC98076.1| recR [Listeria innocua Clip11262]
gi|313616686|gb|EFR89470.1| recombination protein RecR [Listeria innocua FSL S4-378]
Length = 198
Score = 314 bits (807), Expect = 3e-84, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 122/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDKDPCYICSDTSRDRSVLCVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I E+I A + +EG+ TA YI L+ +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKAMEGRRE 197
>gi|152973873|ref|YP_001373390.1| recombination protein RecR [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189029352|sp|A7GJT7|RECR_BACCN RecName: Full=Recombination protein recR
gi|152022625|gb|ABS20395.1| recombination protein RecR [Bacillus cytotoxicus NVH 391-98]
Length = 198
Score = 314 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 122/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+++ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICDDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|289577300|ref|YP_003475927.1| recombination protein RecR [Thermoanaerobacter italicus Ab9]
gi|289527013|gb|ADD01365.1| recombination protein RecR [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ LI+ L+++PG GP++A+R ++ + + L++++ + K+ C IC
Sbjct: 3 YYSASLAKLIEELSKLPGIGPKTAQRLAFFIINMPIEEVKSLSQSIIDAKEKIKYCKICY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ IGPED
Sbjct: 63 NITDTEVCNICNDEERDNSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGIGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L++R++ ++E+I A + IEG+ TA YI LK + VK+TR+A+G+P+G +L+
Sbjct: 123 IKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKSLGVKVTRIAHGVPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R L
Sbjct: 183 YTDVVTLSRALEGRREL 199
>gi|251794182|ref|YP_003008913.1| recombination protein RecR [Paenibacillus sp. JDR-2]
gi|247541808|gb|ACS98826.1| recombination protein RecR [Paenibacillus sp. JDR-2]
Length = 199
Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI R+PG GP++A R H+++ KE + A+A+ ++ + CS+C
Sbjct: 2 FYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLRMKEDDVIDFAKALVSVKRNLTYCSVCC 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TDPC IC D+ RD SVI VV++ DL A+ER+K YHVL G++SP++ IGP+
Sbjct: 62 NITDTDPCRICQDKTRDNSVICVVQESKDLVAMERTKEFQGFYHVLQGAISPIEGIGPDQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I L+ R+ ++++ELI A + IEG+ TA YI +K +++TR+A+G+P+G +L+
Sbjct: 122 IKIAELLRRLSDERVQELILATNPNIEGEATAMYISRLVKPFGIRVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKALEGRREL 198
>gi|167772014|ref|ZP_02444067.1| hypothetical protein ANACOL_03388 [Anaerotruncus colihominis DSM
17241]
gi|167665812|gb|EDS09942.1| hypothetical protein ANACOL_03388 [Anaerotruncus colihominis DSM
17241]
Length = 199
Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ R+PG G +SA+R +++ A+A+ ++K+ CSIC ++
Sbjct: 7 PLVKLIEQFERLPGIGRKSAQRLAFYVLNLPRDKAQQFADAIVEAHDKIKKCSICQSLTE 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
T+ C IC DQ RDAS I VVE+ D+ A ER++ LYHVL G +SP+D IGPE + I+
Sbjct: 67 TEVCPICSDQSRDASTICVVENSQDVLAFERTREYKGLYHVLHGLISPMDGIGPEQLHIK 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RI + E+I A + T+EG+ TA YI LK + V++TRLAYGIP+G L+Y D+
Sbjct: 127 ELLARISAGGVDEVIMATNPTVEGEATAMYIARLLKPMGVRVTRLAYGIPVGGNLEYADE 186
Query: 189 GTIFEAIRSRTVL 201
T+F A+ R+ L
Sbjct: 187 VTLFRALEGRSEL 199
>gi|21282164|ref|NP_645252.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MW2]
gi|49485344|ref|YP_042565.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651361|ref|YP_185410.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
COL]
gi|82750187|ref|YP_415928.1| recombination protein RecR [Staphylococcus aureus RF122]
gi|87159968|ref|YP_493166.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194235|ref|YP_499027.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|151220656|ref|YP_001331478.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508725|ref|YP_001574384.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142545|ref|ZP_03567038.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253730828|ref|ZP_04864993.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735212|ref|ZP_04869377.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
TCH130]
gi|257424590|ref|ZP_05601019.1| recombination protein recR [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427256|ref|ZP_05603658.1| recombination protein recR [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429892|ref|ZP_05606279.1| recombination protein recR [Staphylococcus aureus subsp. aureus
68-397]
gi|257432595|ref|ZP_05608958.1| recombination protein recR [Staphylococcus aureus subsp. aureus
E1410]
gi|257435500|ref|ZP_05611551.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M876]
gi|258424487|ref|ZP_05687364.1| recombination protein RecR [Staphylococcus aureus A9635]
gi|258452486|ref|ZP_05700494.1| recombination protein recR [Staphylococcus aureus A5948]
gi|262049734|ref|ZP_06022600.1| recombination protein RecR [Staphylococcus aureus D30]
gi|262051992|ref|ZP_06024204.1| recombination protein RecR [Staphylococcus aureus 930918-3]
gi|282912685|ref|ZP_06320481.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913305|ref|ZP_06321097.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M899]
gi|282915796|ref|ZP_06323565.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
D139]
gi|282918259|ref|ZP_06326000.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C427]
gi|282922933|ref|ZP_06330623.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C101]
gi|282924530|ref|ZP_06332200.1| recombination protein RecR [Staphylococcus aureus A9765]
gi|283768196|ref|ZP_06341110.1| recombination protein recR [Staphylococcus aureus subsp. aureus
H19]
gi|284023489|ref|ZP_06377887.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
132]
gi|293498352|ref|ZP_06666206.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
58-424]
gi|293509293|ref|ZP_06668010.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M809]
gi|293550560|ref|ZP_06673232.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M1015]
gi|294850660|ref|ZP_06791383.1| recombination protein RecR [Staphylococcus aureus A9754]
gi|297209023|ref|ZP_06925423.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911026|ref|ZP_07128475.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH70]
gi|304380494|ref|ZP_07363172.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|24212225|sp|Q8NY07|RECR_STAAW RecName: Full=Recombination protein recR
gi|56749540|sp|Q6GC08|RECR_STAAS RecName: Full=Recombination protein recR
gi|71152039|sp|Q5HIJ7|RECR_STAAC RecName: Full=Recombination protein recR
gi|122540160|sp|Q2G0T3|RECR_STAA8 RecName: Full=Recombination protein recR
gi|123487161|sp|Q2FJG2|RECR_STAA3 RecName: Full=Recombination protein recR
gi|123548602|sp|Q2YVW5|RECR_STAAB RecName: Full=Recombination protein recR
gi|172048764|sp|A6QED4|RECR_STAAE RecName: Full=Recombination protein recR
gi|189029379|sp|A8Z0X4|RECR_STAAT RecName: Full=Recombination protein recR
gi|21203600|dbj|BAB94300.1| recombination protein [Staphylococcus aureus subsp. aureus MW2]
gi|49243787|emb|CAG42212.1| putative recombination protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285547|gb|AAW37641.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
COL]
gi|82655718|emb|CAI80117.1| recombination protein [Staphylococcus aureus RF122]
gi|87125942|gb|ABD20456.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201793|gb|ABD29603.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373456|dbj|BAF66716.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367534|gb|ABX28505.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725440|gb|EES94169.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726876|gb|EES95605.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
TCH130]
gi|257273608|gb|EEV05710.1| recombination protein recR [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276887|gb|EEV08338.1| recombination protein recR [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280373|gb|EEV10960.1| recombination protein recR [Staphylococcus aureus subsp. aureus
68-397]
gi|257283474|gb|EEV13606.1| recombination protein recR [Staphylococcus aureus subsp. aureus
E1410]
gi|257286096|gb|EEV16212.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M876]
gi|257845082|gb|EEV69119.1| recombination protein RecR [Staphylococcus aureus A9635]
gi|257859886|gb|EEV82726.1| recombination protein recR [Staphylococcus aureus A5948]
gi|259160121|gb|EEW45153.1| recombination protein RecR [Staphylococcus aureus 930918-3]
gi|259162196|gb|EEW46772.1| recombination protein RecR [Staphylococcus aureus D30]
gi|269940051|emb|CBI48427.1| putative recombination protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282315154|gb|EFB45540.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C101]
gi|282317956|gb|EFB48324.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C427]
gi|282320334|gb|EFB50675.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
D139]
gi|282323405|gb|EFB53724.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M899]
gi|282324381|gb|EFB54697.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282592839|gb|EFB97844.1| recombination protein RecR [Staphylococcus aureus A9765]
gi|283461141|gb|EFC08226.1| recombination protein recR [Staphylococcus aureus subsp. aureus
H19]
gi|283469772|emb|CAQ48983.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ST398]
gi|290919607|gb|EFD96683.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M1015]
gi|291097283|gb|EFE27541.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
58-424]
gi|291467932|gb|EFF10441.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
M809]
gi|294822497|gb|EFG38943.1| recombination protein RecR [Staphylococcus aureus A9754]
gi|296886294|gb|EFH25227.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|298693809|gb|ADI97031.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ED133]
gi|300887205|gb|EFK82401.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH70]
gi|302332193|gb|ADL22386.1| putative recombination protein [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750370|gb|ADL64547.1| putative recombination protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341012|gb|EFM06934.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312436433|gb|ADQ75504.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH60]
gi|315196726|gb|EFU27072.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139231|gb|EFW31110.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142045|gb|EFW33870.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438497|gb|EGA96248.1| recombination protein RecR [Staphylococcus aureus O11]
gi|323441333|gb|EGA98996.1| recombination protein RecR [Staphylococcus aureus O46]
gi|329313198|gb|AEB87611.1| Recombination protein recR [Staphylococcus aureus subsp. aureus
T0131]
gi|329725116|gb|EGG61609.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
21189]
Length = 198
Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 130/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|150392455|ref|YP_001322504.1| recombination protein RecR [Alkaliphilus metalliredigens QYMF]
gi|166918734|sp|A6TXC7|RECR_ALKMQ RecName: Full=Recombination protein recR
gi|149952317|gb|ABR50845.1| recombination protein RecR [Alkaliphilus metalliredigens QYMF]
Length = 199
Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 117/198 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI +++PG G ++A+R H++ + L+ ++ + C IC
Sbjct: 2 NYYSAPIAKLIDEFSKLPGIGRKTAQRLAFHVISMGYEDAEKLSNSIIEAKKSIKYCRIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC D R SVI V+ED D+ A+ER++ YHVL G++SPL+ IGPE
Sbjct: 62 TNLTDKEVCNICSDPNRKKSVICVIEDPRDVVAMERTREFKGQYHVLHGAISPLEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+I I+ L+ R++ + E+I A++ IEG+ TA YI LK I +K++R+A+GIP+G +L
Sbjct: 122 EINIKELLIRLQEHPVEEVILAMNPNIEGEATAMYIGKLLKPIGIKVSRIAHGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 182 EYADEVTLSKALEGRREI 199
>gi|70727531|ref|YP_254447.1| recombination protein RecR [Staphylococcus haemolyticus JCSC1435]
gi|123659170|sp|Q4L3D6|RECR_STAHJ RecName: Full=Recombination protein recR
gi|68448257|dbj|BAE05841.1| recombination protein [Staphylococcus haemolyticus JCSC1435]
Length = 198
Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|126652953|ref|ZP_01725095.1| recombination protein RecR [Bacillus sp. B14905]
gi|126590283|gb|EAZ84405.1| recombination protein RecR [Bacillus sp. B14905]
Length = 198
Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 127/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG GP++A R ++ KE+ + ++A+ + + CS+CG
Sbjct: 2 YYPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEEDVLSFSKALVDAKRNLSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPED
Sbjct: 62 NITDVDPCHICTDKQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + SL+ R+ + ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+
Sbjct: 122 INVASLLVRLHDESVQELILATNSTIEGEATAMYISRLVKPSGIRATRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKAMEGRREL 198
>gi|307267450|ref|ZP_07548938.1| recombination protein RecR [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917531|gb|EFN47817.1| recombination protein RecR [Thermoanaerobacter wiegelii Rt8.B1]
Length = 199
Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ LI+ L+++PG G ++A+R ++ + + L++A+ + K+ C IC
Sbjct: 2 NYYSASLAKLIEELSKLPGIGLKTAQRLAFFIINMPPEEVKSLSQAIIDAKEKIKYCRIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GPE
Sbjct: 62 YNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L++R++ I+E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L
Sbjct: 122 DIKIKELLDRVKNGNIKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R L
Sbjct: 182 EYTDIVTLSRALEGRREL 199
>gi|15923470|ref|NP_371004.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
Mu50]
gi|156978808|ref|YP_001441067.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
Mu3]
gi|255005273|ref|ZP_05143874.2| recombination protein RecR [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|20139575|sp|Q932G3|RECR_STAAM RecName: Full=Recombination protein recR
gi|166221970|sp|A7WYM0|RECR_STAA1 RecName: Full=Recombination protein recR
gi|14246248|dbj|BAB56642.1| recombination protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156720943|dbj|BAF77360.1| recombination protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 198
Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 130/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPSLIERLKSDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAITGRTEM 198
>gi|15926157|ref|NP_373690.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
N315]
gi|148266938|ref|YP_001245881.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
JH9]
gi|150392984|ref|YP_001315659.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
JH1]
gi|253315724|ref|ZP_04838937.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|257795399|ref|ZP_05644378.1| recombination protein RecR [Staphylococcus aureus A9781]
gi|258413425|ref|ZP_05681700.1| recombination protein RecR [Staphylococcus aureus A9763]
gi|258421453|ref|ZP_05684380.1| recombination protein RecR [Staphylococcus aureus A9719]
gi|258436848|ref|ZP_05689188.1| recombination protein recR [Staphylococcus aureus A9299]
gi|258444433|ref|ZP_05692767.1| recombination protein recR [Staphylococcus aureus A8115]
gi|258445645|ref|ZP_05693825.1| recombination protein recR [Staphylococcus aureus A6300]
gi|258448177|ref|ZP_05696306.1| recombination protein recR [Staphylococcus aureus A6224]
gi|258456011|ref|ZP_05703966.1| recombination protein recR [Staphylococcus aureus A5937]
gi|269202099|ref|YP_003281368.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ED98]
gi|282893619|ref|ZP_06301852.1| recombination protein RecR [Staphylococcus aureus A8117]
gi|282927513|ref|ZP_06335131.1| recombination protein RecR [Staphylococcus aureus A10102]
gi|295405728|ref|ZP_06815538.1| recombination protein RecR [Staphylococcus aureus A8819]
gi|296276915|ref|ZP_06859422.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MR1]
gi|297245637|ref|ZP_06929505.1| recombination protein RecR [Staphylococcus aureus A8796]
gi|20139661|sp|Q99WC3|RECR_STAAN RecName: Full=Recombination protein recR
gi|189029377|sp|A6TYV4|RECR_STAA2 RecName: Full=Recombination protein recR
gi|189029378|sp|A5IQ32|RECR_STAA9 RecName: Full=Recombination protein recR
gi|13700370|dbj|BAB41668.1| recombination protein [Staphylococcus aureus subsp. aureus N315]
gi|147740007|gb|ABQ48305.1| DNA replication and repair protein RecR [Staphylococcus aureus
subsp. aureus JH9]
gi|149945436|gb|ABR51372.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
JH1]
gi|257789371|gb|EEV27711.1| recombination protein RecR [Staphylococcus aureus A9781]
gi|257839672|gb|EEV64141.1| recombination protein RecR [Staphylococcus aureus A9763]
gi|257842877|gb|EEV67299.1| recombination protein RecR [Staphylococcus aureus A9719]
gi|257848639|gb|EEV72626.1| recombination protein recR [Staphylococcus aureus A9299]
gi|257850692|gb|EEV74640.1| recombination protein recR [Staphylococcus aureus A8115]
gi|257855595|gb|EEV78530.1| recombination protein recR [Staphylococcus aureus A6300]
gi|257858692|gb|EEV81566.1| recombination protein recR [Staphylococcus aureus A6224]
gi|257862223|gb|EEV84996.1| recombination protein recR [Staphylococcus aureus A5937]
gi|262074389|gb|ACY10362.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ED98]
gi|282590837|gb|EFB95913.1| recombination protein RecR [Staphylococcus aureus A10102]
gi|282764305|gb|EFC04432.1| recombination protein RecR [Staphylococcus aureus A8117]
gi|285816179|gb|ADC36666.1| Recombination protein RecR [Staphylococcus aureus 04-02981]
gi|294969803|gb|EFG45822.1| recombination protein RecR [Staphylococcus aureus A8819]
gi|297177623|gb|EFH36874.1| recombination protein RecR [Staphylococcus aureus A8796]
gi|312828975|emb|CBX33817.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130110|gb|EFT86099.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
CGS03]
gi|329725651|gb|EGG62130.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
21172]
gi|329730673|gb|EGG67054.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
21193]
Length = 198
Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 130/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPSLIERLKSDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|315644461|ref|ZP_07897594.1| recombination protein RecR [Paenibacillus vortex V453]
gi|315280211|gb|EFU43504.1| recombination protein RecR [Paenibacillus vortex V453]
Length = 199
Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 128/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI R+PG GP++A R H++ KE + A+A+ ++ + CS+C
Sbjct: 2 YYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSVCC 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TDPC +C D+ RD S I VV+D DL A+ER+K + YHVL G++SP++ IGP++
Sbjct: 62 NITDTDPCRVCQDKTRDPSTICVVQDAKDLVAMERTKEFDGYYHVLHGAISPMEGIGPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ L+ R+ ++++ELI A +A IEG+ TA YI ++ D+K+TR+A+G+P+G +L+
Sbjct: 122 IRLKELLTRLSDERVKELILATNANIEGEATAMYISRLVRPFDIKVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKALEGRREL 198
>gi|27469223|ref|NP_765860.1| recombination protein RecR [Staphylococcus epidermidis ATCC 12228]
gi|57866112|ref|YP_187712.1| recombination protein RecR [Staphylococcus epidermidis RP62A]
gi|242243367|ref|ZP_04797812.1| recombination protein RecR [Staphylococcus epidermidis W23144]
gi|251811245|ref|ZP_04825718.1| recombination protein RecR [Staphylococcus epidermidis BCM-HMP0060]
gi|282874601|ref|ZP_06283483.1| recombination protein RecR [Staphylococcus epidermidis SK135]
gi|293367697|ref|ZP_06614349.1| recombination protein R [Staphylococcus epidermidis
M23864:W2(grey)]
gi|33301520|sp|Q8CMS3|RECR_STAES RecName: Full=Recombination protein recR
gi|71152040|sp|Q5HRS7|RECR_STAEQ RecName: Full=Recombination protein recR
gi|27316772|gb|AAO05947.1|AE016751_242 recombination protein [Staphylococcus epidermidis ATCC 12228]
gi|57636770|gb|AAW53558.1| recombination protein RecR [Staphylococcus epidermidis RP62A]
gi|242233316|gb|EES35628.1| recombination protein RecR [Staphylococcus epidermidis W23144]
gi|251805206|gb|EES57863.1| recombination protein RecR [Staphylococcus epidermidis BCM-HMP0060]
gi|281296525|gb|EFA89037.1| recombination protein RecR [Staphylococcus epidermidis SK135]
gi|291318267|gb|EFE58661.1| recombination protein R [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399735|gb|EFV87983.1| recombination protein RecR [Staphylococcus epidermidis FRI909]
gi|329727986|gb|EGG64433.1| recombination protein RecR [Staphylococcus epidermidis VCU144]
gi|329734389|gb|EGG70703.1| recombination protein RecR [Staphylococcus epidermidis VCU028]
gi|329736120|gb|EGG72393.1| recombination protein RecR [Staphylococcus epidermidis VCU045]
Length = 198
Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVKFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPALVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|302390661|ref|YP_003826482.1| DNA replication and repair protein RecR [Thermosediminibacter
oceani DSM 16646]
gi|302201289|gb|ADL08859.1| DNA replication and repair protein RecR [Thermosediminibacter
oceani DSM 16646]
Length = 198
Score = 313 bits (804), Expect = 6e-84, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ L+R+PG GP++A+R +++K L +A+A + CS+CG
Sbjct: 3 YYAEPIARLIEELSRLPGIGPKTAQRLAFYILKMPADRAARLVQAIAGARESIVYCSVCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DPC+IC RD + I+VVED D+ A+E+++ LYHVL G +SPL+ IGP+D
Sbjct: 63 NFTDVDPCSICNAPHRDRNTIMVVEDPKDVVAIEKTRDYKGLYHVLHGVISPLEGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L+ R+ ++E+I A + +EG+ TA YI LK + +K+TR+A+GIPMG +LD
Sbjct: 123 IRIKELLARVASG-VKEVIIATNPDVEGEATALYIARLLKPLGLKVTRIAHGIPMGGDLD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEITLAKALEGRREL 198
>gi|288554628|ref|YP_003426563.1| recombination protein RecR [Bacillus pseudofirmus OF4]
gi|288545788|gb|ADC49671.1| recombination protein RecR [Bacillus pseudofirmus OF4]
Length = 198
Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG GP++A R ++ KE + A+A+ N + CS+C N
Sbjct: 3 YPEPIAKLIEGFMKLPGIGPKTASRLAFFVLDMKEDDVLDFAKALVNAKRNLTYCSVCHN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D+ RD S++ VV++ D+ A+E+ K YHVL G++SP+D IGPED+
Sbjct: 63 ITDTDPCRICEDKHRDDSMVCVVQEAKDVIAMEKMKEYRGHYHVLHGAISPMDGIGPEDV 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I+E+I A + TIEG+ TA YI +K +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIPELLKRLQDDTIQEVIIATNPTIEGEATAMYISRLVKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI R L
Sbjct: 183 ADEVTLSRAIEGRREL 198
>gi|310657424|ref|YP_003935145.1| gap repair protein [Clostridium sticklandii DSM 519]
gi|308824202|emb|CBH20240.1| gap repair protein [Clostridium sticklandii]
Length = 200
Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI+ A++PG G ++A+R H++ + + LA A+ N + CS C
Sbjct: 2 DYYSGPISRLIEEFAKLPGVGRKTAQRLAFHVINMDKDQVKALAHAIVEAKNNITYCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ +PC+IC R + +I VVED D+ A+ER+K + YHVL G++SP+D I P+
Sbjct: 62 CNIADKNPCSICDSPNRTSDIICVVEDPRDVAAMERTKEFHGKYHVLHGTISPMDSITPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ L+ R+ +++E+I A + TIEG+ TA YI +K ++K+TR+A+G+P+G+++
Sbjct: 122 MLKIKELVGRMANPELKEVILATNPTIEGEATAMYIARLIKPFNIKVTRIAHGLPVGADI 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI +A+ R +
Sbjct: 182 EYADEVTITKALEGRREI 199
>gi|304407304|ref|ZP_07388957.1| recombination protein RecR [Paenibacillus curdlanolyticus YK9]
gi|304343745|gb|EFM09586.1| recombination protein RecR [Paenibacillus curdlanolyticus YK9]
Length = 199
Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI R+PG GP++A R H+++ +E + A+A+ ++ + CS+C
Sbjct: 2 YYPEPIAKLIDAFTRLPGIGPKTAARLAFHVLRMQEDDVIDFAKALVSVKRNLHYCSVCC 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD +VI VV++ DL A+ER+K + YHVL G++SP++ IGP+
Sbjct: 62 NITDVDPCRICQDKNRDHAVICVVQESKDLVAMERTKEFSGYYHVLQGAISPMEGIGPDQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + L++R+ ++++ELI A + IEG+ TA Y+ +K +++TR+A+G+P+G +L+
Sbjct: 122 IRVAELLQRLSDERVQELIMATNPNIEGEATAMYLSRLVKPFGIRVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKALEGRREL 198
>gi|220932909|ref|YP_002509817.1| recombination protein RecR [Halothermothrix orenii H 168]
gi|254790771|sp|B8CZX0|RECR_HALOH RecName: Full=Recombination protein recR
gi|219994219|gb|ACL70822.1| recombination protein RecR [Halothermothrix orenii H 168]
Length = 198
Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI L+R+PG GP++A+R ++++ + L+++M + K CS+C
Sbjct: 2 RYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC C +RD ++I VVE D+ A+ER+ LYHVL GS+SP+D IGPE
Sbjct: 62 NNLTEKDPCDFCSSPERDHNLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I++L+ R++ ++E+I A EG TA Y+ +K + VK+TR+A+G+P+G +L
Sbjct: 122 DIKIRNLLPRLKEG-VKEVIVATDPNAEGDATAMYLARLIKPLGVKVTRIAHGLPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLSKALEGRREM 198
>gi|163938033|ref|YP_001642917.1| recombination protein RecR [Bacillus weihenstephanensis KBAB4]
gi|229009535|ref|ZP_04166764.1| hypothetical protein bmyco0001_140 [Bacillus mycoides DSM 2048]
gi|229053871|ref|ZP_04195308.1| hypothetical protein bcere0026_140 [Bacillus cereus AH603]
gi|229131032|ref|ZP_04259947.1| hypothetical protein bcere0014_130 [Bacillus cereus BDRD-ST196]
gi|229165014|ref|ZP_04292812.1| hypothetical protein bcere0007_140 [Bacillus cereus AH621]
gi|229890127|sp|A9VN38|RECR_BACWK RecName: Full=Recombination protein recR
gi|163860230|gb|ABY41289.1| recombination protein RecR [Bacillus weihenstephanensis KBAB4]
gi|228618466|gb|EEK75493.1| hypothetical protein bcere0007_140 [Bacillus cereus AH621]
gi|228652427|gb|EEL08349.1| hypothetical protein bcere0014_130 [Bacillus cereus BDRD-ST196]
gi|228721481|gb|EEL72998.1| hypothetical protein bcere0026_140 [Bacillus cereus AH603]
gi|228751746|gb|EEM01543.1| hypothetical protein bmyco0001_140 [Bacillus mycoides DSM 2048]
Length = 198
Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICDDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREI 198
>gi|289435977|ref|YP_003465849.1| Recombination protein recR [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172221|emb|CBH28767.1| Recombination protein recR [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 198
Score = 313 bits (804), Expect = 8e-84, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 123/195 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC+D RD S+I VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDKDPCYICVDTSRDRSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I E+I A + +EG+ TA YI LK +KITR+A+G+P+G +L+Y
Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKAMEGRRE 197
>gi|229083337|ref|ZP_04215697.1| hypothetical protein bcere0022_210 [Bacillus cereus Rock3-44]
gi|228699984|gb|EEL52609.1| hypothetical protein bcere0022_210 [Bacillus cereus Rock3-44]
Length = 198
Score = 313 bits (804), Expect = 8e-84, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 122/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+++ N + CSICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SVI VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICDDSHRDQSVICVVQEAKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|30018297|ref|NP_829928.1| recombination protein RecR [Bacillus cereus ATCC 14579]
gi|42779103|ref|NP_976350.1| recombination protein RecR [Bacillus cereus ATCC 10987]
gi|49478186|ref|YP_034380.1| recombination protein RecR [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145190|ref|YP_081639.1| recombination protein RecR [Bacillus cereus E33L]
gi|118475798|ref|YP_892949.1| recombination protein RecR [Bacillus thuringiensis str. Al Hakam]
gi|167635028|ref|ZP_02393345.1| recombination protein RecR [Bacillus anthracis str. A0442]
gi|170688899|ref|ZP_02880101.1| recombination protein RecR [Bacillus anthracis str. A0465]
gi|196036401|ref|ZP_03103798.1| recombination protein RecR [Bacillus cereus W]
gi|196041952|ref|ZP_03109239.1| recombination protein RecR [Bacillus cereus NVH0597-99]
gi|196047692|ref|ZP_03114896.1| recombination protein RecR [Bacillus cereus 03BB108]
gi|206972673|ref|ZP_03233613.1| recombination protein RecR [Bacillus cereus AH1134]
gi|206978342|ref|ZP_03239216.1| recombination protein RecR [Bacillus cereus H3081.97]
gi|217957601|ref|YP_002336143.1| recombination protein RecR [Bacillus cereus AH187]
gi|218235723|ref|YP_002364875.1| recombination protein RecR [Bacillus cereus B4264]
gi|218895161|ref|YP_002443572.1| recombination protein RecR [Bacillus cereus G9842]
gi|218901226|ref|YP_002449060.1| recombination protein RecR [Bacillus cereus AH820]
gi|222093795|ref|YP_002527843.1| recombination protein recr [Bacillus cereus Q1]
gi|225862077|ref|YP_002747455.1| recombination protein RecR [Bacillus cereus 03BB102]
gi|228898778|ref|ZP_04063062.1| hypothetical protein bthur0014_140 [Bacillus thuringiensis IBL
4222]
gi|228905821|ref|ZP_04069720.1| hypothetical protein bthur0013_140 [Bacillus thuringiensis IBL 200]
gi|228912763|ref|ZP_04076412.1| hypothetical protein bthur0012_140 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228918975|ref|ZP_04082356.1| hypothetical protein bthur0011_130 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228925278|ref|ZP_04088376.1| hypothetical protein bthur0010_140 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931527|ref|ZP_04094435.1| hypothetical protein bthur0009_220 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228937327|ref|ZP_04099975.1| hypothetical protein bthur0008_140 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228943831|ref|ZP_04106218.1| hypothetical protein bthur0007_140 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228950572|ref|ZP_04112708.1| hypothetical protein bthur0006_140 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228956465|ref|ZP_04118263.1| hypothetical protein bthur0005_130 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228963122|ref|ZP_04124293.1| hypothetical protein bthur0004_150 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228970213|ref|ZP_04130874.1| hypothetical protein bthur0003_130 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976783|ref|ZP_04137197.1| hypothetical protein bthur0002_130 [Bacillus thuringiensis Bt407]
gi|228983280|ref|ZP_04143495.1| hypothetical protein bthur0001_130 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229039929|ref|ZP_04189695.1| hypothetical protein bcere0027_130 [Bacillus cereus AH676]
gi|229067788|ref|ZP_04201107.1| hypothetical protein bcere0025_140 [Bacillus cereus F65185]
gi|229077297|ref|ZP_04209980.1| hypothetical protein bcere0023_230 [Bacillus cereus Rock4-2]
gi|229089157|ref|ZP_04220440.1| hypothetical protein bcere0021_140 [Bacillus cereus Rock3-42]
gi|229107710|ref|ZP_04237348.1| hypothetical protein bcere0018_130 [Bacillus cereus Rock1-15]
gi|229119687|ref|ZP_04248950.1| hypothetical protein bcere0016_140 [Bacillus cereus 95/8201]
gi|229125541|ref|ZP_04254575.1| hypothetical protein bcere0015_130 [Bacillus cereus BDRD-Cer4]
gi|229136869|ref|ZP_04265498.1| hypothetical protein bcere0013_150 [Bacillus cereus BDRD-ST26]
gi|229142830|ref|ZP_04271274.1| hypothetical protein bcere0012_130 [Bacillus cereus BDRD-ST24]
gi|229148433|ref|ZP_04276691.1| hypothetical protein bcere0011_130 [Bacillus cereus m1550]
gi|229153804|ref|ZP_04281936.1| hypothetical protein bcere0010_130 [Bacillus cereus ATCC 4342]
gi|229159199|ref|ZP_04287225.1| hypothetical protein bcere0009_140 [Bacillus cereus R309803]
gi|229176624|ref|ZP_04304030.1| hypothetical protein bcere0005_130 [Bacillus cereus 172560W]
gi|229182419|ref|ZP_04309672.1| hypothetical protein bcere0004_140 [Bacillus cereus BGSC 6E1]
gi|229188309|ref|ZP_04315360.1| hypothetical protein bcere0002_140 [Bacillus cereus ATCC 10876]
gi|229194415|ref|ZP_04321220.1| hypothetical protein bcere0001_130 [Bacillus cereus m1293]
gi|254686613|ref|ZP_05150472.1| recombination protein RecR [Bacillus anthracis str. CNEVA-9066]
gi|254724166|ref|ZP_05185951.1| recombination protein RecR [Bacillus anthracis str. A1055]
gi|254744197|ref|ZP_05201878.1| recombination protein RecR [Bacillus anthracis str. Kruger B]
gi|296500858|ref|YP_003662558.1| recombination protein RecR [Bacillus thuringiensis BMB171]
gi|301051761|ref|YP_003789972.1| recombination protein R [Bacillus anthracis CI]
gi|33301482|sp|Q81JB9|RECR_BACCR RecName: Full=Recombination protein recR
gi|73621457|sp|Q73FI4|RECR_BACC1 RecName: Full=Recombination protein recR
gi|73621458|sp|Q63HE8|RECR_BACCZ RecName: Full=Recombination protein recR
gi|73621461|sp|Q6HPZ0|RECR_BACHK RecName: Full=Recombination protein recR
gi|166221922|sp|A0R899|RECR_BACAH RecName: Full=Recombination protein recR
gi|226737886|sp|B7JJD6|RECR_BACC0 RecName: Full=Recombination protein recR
gi|226738994|sp|B7IS39|RECR_BACC2 RecName: Full=Recombination protein recR
gi|226738995|sp|B7HIJ3|RECR_BACC4 RecName: Full=Recombination protein recR
gi|226738996|sp|B7HPT6|RECR_BACC7 RecName: Full=Recombination protein recR
gi|254790749|sp|C1ES27|RECR_BACC3 RecName: Full=Recombination protein recR
gi|254790750|sp|B9IYI9|RECR_BACCQ RecName: Full=Recombination protein recR
gi|29893837|gb|AAP07129.1| Recombination protein recR [Bacillus cereus ATCC 14579]
gi|42735018|gb|AAS38958.1| recombination protein RecR [Bacillus cereus ATCC 10987]
gi|49329742|gb|AAT60388.1| recombination protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51978659|gb|AAU20209.1| recombination protein [Bacillus cereus E33L]
gi|118415023|gb|ABK83442.1| DNA replication and repair protein RecR [Bacillus thuringiensis
str. Al Hakam]
gi|167529502|gb|EDR92252.1| recombination protein RecR [Bacillus anthracis str. A0442]
gi|170667123|gb|EDT17884.1| recombination protein RecR [Bacillus anthracis str. A0465]
gi|195991031|gb|EDX55002.1| recombination protein RecR [Bacillus cereus W]
gi|196021477|gb|EDX60180.1| recombination protein RecR [Bacillus cereus 03BB108]
gi|196027207|gb|EDX65827.1| recombination protein RecR [Bacillus cereus NVH0597-99]
gi|206732393|gb|EDZ49575.1| recombination protein RecR [Bacillus cereus AH1134]
gi|206743434|gb|EDZ54867.1| recombination protein RecR [Bacillus cereus H3081.97]
gi|217065707|gb|ACJ79957.1| recombination protein RecR [Bacillus cereus AH187]
gi|218163680|gb|ACK63672.1| recombination protein RecR [Bacillus cereus B4264]
gi|218536247|gb|ACK88645.1| recombination protein RecR [Bacillus cereus AH820]
gi|218543855|gb|ACK96249.1| recombination protein RecR [Bacillus cereus G9842]
gi|221237841|gb|ACM10551.1| recombination protein [Bacillus cereus Q1]
gi|225788575|gb|ACO28792.1| recombination protein RecR [Bacillus cereus 03BB102]
gi|228589071|gb|EEK47084.1| hypothetical protein bcere0001_130 [Bacillus cereus m1293]
gi|228595177|gb|EEK52945.1| hypothetical protein bcere0002_140 [Bacillus cereus ATCC 10876]
gi|228601065|gb|EEK58632.1| hypothetical protein bcere0004_140 [Bacillus cereus BGSC 6E1]
gi|228606854|gb|EEK64269.1| hypothetical protein bcere0005_130 [Bacillus cereus 172560W]
gi|228624280|gb|EEK81080.1| hypothetical protein bcere0009_140 [Bacillus cereus R309803]
gi|228629673|gb|EEK86368.1| hypothetical protein bcere0010_130 [Bacillus cereus ATCC 4342]
gi|228635042|gb|EEK91613.1| hypothetical protein bcere0011_130 [Bacillus cereus m1550]
gi|228640644|gb|EEK97030.1| hypothetical protein bcere0012_130 [Bacillus cereus BDRD-ST24]
gi|228646604|gb|EEL02809.1| hypothetical protein bcere0013_150 [Bacillus cereus BDRD-ST26]
gi|228657925|gb|EEL13729.1| hypothetical protein bcere0015_130 [Bacillus cereus BDRD-Cer4]
gi|228663778|gb|EEL19355.1| hypothetical protein bcere0016_140 [Bacillus cereus 95/8201]
gi|228675750|gb|EEL30956.1| hypothetical protein bcere0018_130 [Bacillus cereus Rock1-15]
gi|228694180|gb|EEL47860.1| hypothetical protein bcere0021_140 [Bacillus cereus Rock3-42]
gi|228706020|gb|EEL58325.1| hypothetical protein bcere0023_230 [Bacillus cereus Rock4-2]
gi|228715341|gb|EEL67198.1| hypothetical protein bcere0025_140 [Bacillus cereus F65185]
gi|228727419|gb|EEL78610.1| hypothetical protein bcere0027_130 [Bacillus cereus AH676]
gi|228776460|gb|EEM24811.1| hypothetical protein bthur0001_130 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228782945|gb|EEM31109.1| hypothetical protein bthur0002_130 [Bacillus thuringiensis Bt407]
gi|228789514|gb|EEM37432.1| hypothetical protein bthur0003_130 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796578|gb|EEM44015.1| hypothetical protein bthur0004_150 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228803222|gb|EEM50042.1| hypothetical protein bthur0005_130 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228809115|gb|EEM55598.1| hypothetical protein bthur0006_140 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228815855|gb|EEM62089.1| hypothetical protein bthur0007_140 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822352|gb|EEM68332.1| hypothetical protein bthur0008_140 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228828145|gb|EEM73871.1| hypothetical protein bthur0009_220 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834392|gb|EEM79931.1| hypothetical protein bthur0010_140 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228840690|gb|EEM85950.1| hypothetical protein bthur0011_130 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846890|gb|EEM91893.1| hypothetical protein bthur0012_140 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228853829|gb|EEM98587.1| hypothetical protein bthur0013_140 [Bacillus thuringiensis IBL 200]
gi|228860870|gb|EEN05246.1| hypothetical protein bthur0014_140 [Bacillus thuringiensis IBL
4222]
gi|296321910|gb|ADH04838.1| recombination protein RecR [Bacillus thuringiensis BMB171]
gi|300373930|gb|ADK02834.1| recombination protein R [Bacillus cereus biovar anthracis str. CI]
gi|324324014|gb|ADY19274.1| recombination protein RecR [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|326937817|gb|AEA13713.1| recombination protein RecR [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 198
Score = 313 bits (803), Expect = 8e-84, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 121/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|221632238|ref|YP_002521459.1| recombination protein RecR [Thermomicrobium roseum DSM 5159]
gi|221157067|gb|ACM06194.1| recombination protein RecR [Thermomicrobium roseum DSM 5159]
Length = 201
Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + + I LI+ A++PG GP++A R HL++ + LA+A+ + +V LC
Sbjct: 1 MRARGPAEPIARLIEEFAKLPGIGPKTASRLAYHLLRCSREDALALAQAIIEVKERVQLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N+ DPC IC D RD I VVED D+ ALER+ A + +YHVL G +SP+D I
Sbjct: 61 SRCFNLTDVDPCPICADPSRDQRTICVVEDPLDVLALERTGAYHGVYHVLHGVISPVDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I+ L+ R++ ++ E+I A++ IEG TA YI +L + V +TR A G+P+G
Sbjct: 121 GPERLRIRELVHRVQQEQPNEVILALNPNIEGDATAMYIARQLIPLGVTVTRPASGLPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ A+ R L
Sbjct: 181 GDLEYADEITLGRALAGRRAL 201
>gi|330684677|gb|EGG96379.1| recombination protein RecR [Staphylococcus epidermidis VCU121]
Length = 198
Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITEKDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREFKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPALVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|49482705|ref|YP_039929.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282903063|ref|ZP_06310956.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C160]
gi|282907452|ref|ZP_06315300.1| recombination protein recR [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907800|ref|ZP_06315640.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283959908|ref|ZP_06377349.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295427011|ref|ZP_06819650.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297588777|ref|ZP_06947418.1| recombination protein R [Staphylococcus aureus subsp. aureus MN8]
gi|56749587|sp|Q6GJJ3|RECR_STAAR RecName: Full=Recombination protein recR
gi|49240834|emb|CAG39501.1| putative recombination protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282328364|gb|EFB58637.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330351|gb|EFB59872.1| recombination protein recR [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282597522|gb|EFC02481.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
C160]
gi|283789500|gb|EFC28327.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295129463|gb|EFG59090.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297577288|gb|EFH96001.1| recombination protein R [Staphylococcus aureus subsp. aureus MN8]
gi|315193218|gb|EFU23617.1| recombination protein RecR [Staphylococcus aureus subsp. aureus
CGS00]
Length = 198
Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats.
Identities = 86/196 (43%), Positives = 130/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLINSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|149182695|ref|ZP_01861162.1| recombination protein RecR [Bacillus sp. SG-1]
gi|148849605|gb|EDL63788.1| recombination protein RecR [Bacillus sp. SG-1]
Length = 198
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 77/194 (39%), Positives = 123/194 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N K+ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLGMKEDTVLEFAKALVNAKRKLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD S++ VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDQDPCYICEDTRRDRSIVCVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R++ + + E+I A + IEG+ TA YI LK ++ TR+A+G+P+G +L+Y
Sbjct: 123 NVPDLLKRLQDEGVEEVILATNPNIEGEATAMYISRLLKPSGIRTTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRT 199
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRR 196
>gi|311028954|ref|ZP_07707044.1| recombination protein RecR [Bacillus sp. m3-13]
Length = 198
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLNMKEDTVLDFAKALVNAKRNLSYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D +RD ++I VV++ D+ A+E+ + N LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDRDPCYICEDNRRDRTIICVVQETKDVIAMEKMRDYNGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R++ +++ELI A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 KIPELIKRLQDDEVQELILATNPNIEGEATAMYISRLLKPSGIKMTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREI 198
>gi|327438118|dbj|BAK14483.1| recombinational DNA repair protein [Solibacillus silvestris
StLB046]
Length = 198
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R H++ KE + A+A+ + + CS CG+
Sbjct: 3 YPEPISRLIDSFMKLPGIGPKTAARLAFHVLTMKEDTVSTFAKALVDAKRNLMYCSQCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD S I VV+D D+ A+E+ + LYHVL G++SP+D +GPEDI
Sbjct: 63 ITDIDPCHICSDKQRDVSTICVVQDPKDVIAMEKMRDYQGLYHVLHGAISPMDGVGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ SL+ R+ ++++ELI A + TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y
Sbjct: 123 NVASLLGRLHDERVQELILATNPTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|294496895|ref|YP_003560595.1| recombination protein RecR [Bacillus megaterium QM B1551]
gi|295702262|ref|YP_003595337.1| recombination protein RecR [Bacillus megaterium DSM 319]
gi|294346832|gb|ADE67161.1| recombination protein RecR [Bacillus megaterium QM B1551]
gi|294799921|gb|ADF36987.1| recombination protein RecR [Bacillus megaterium DSM 319]
Length = 198
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 125/195 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMKEDTVLDFAKALVNAKRNLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC DQ+R+ +V+ VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDQDPCYICQDQRRERNVVCVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R++ +I+E+I A + IEG+ TA YI LK +KITR+A+G+P+G +L+Y
Sbjct: 123 KVPELLKRLQDDEIQEVILATNPNIEGEATAMYISRLLKPTGIKITRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|229027872|ref|ZP_04184029.1| hypothetical protein bcere0028_140 [Bacillus cereus AH1271]
gi|228733448|gb|EEL84273.1| hypothetical protein bcere0028_140 [Bacillus cereus AH1271]
Length = 198
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 121/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ +GPEDI
Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGVGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|229170874|ref|ZP_04298479.1| hypothetical protein bcere0006_140 [Bacillus cereus MM3]
gi|228612609|gb|EEK69826.1| hypothetical protein bcere0006_140 [Bacillus cereus MM3]
Length = 198
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 121/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD S++ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICNDSHRDQSIVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|296271479|ref|YP_003654111.1| recombination protein RecR [Thermobispora bispora DSM 43833]
gi|296094266|gb|ADG90218.1| recombination protein RecR [Thermobispora bispora DSM 43833]
Length = 199
Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R H++ + LA+A+ + K+ C ICG
Sbjct: 1 MYEGVLQNLIDELGRLPGIGPKSAQRIAFHILGADPVDVKRLAQALLEVKEKIHFCRICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV T D C IC D +RD VI VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D
Sbjct: 61 NVATEDECLICRDPRRDDQVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELMARLADGQVNELILATDPNLEGEATATYLARLVKPLGIKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|299542066|ref|ZP_07052382.1| recombination protein RecR [Lysinibacillus fusiformis ZC1]
gi|298725381|gb|EFI66029.1| recombination protein RecR [Lysinibacillus fusiformis ZC1]
Length = 198
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 127/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG GP++A R ++ KE + ++A+ + + CS+CG
Sbjct: 2 YYPEPISKLIDSFMKLPGIGPKTAARLAFFVLTMKEDDVLSFSKALIDAKRNLSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPED
Sbjct: 62 NITDVDPCHICTDKQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + SL+ R++ + ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+
Sbjct: 122 INVASLLVRLQNESVQELILATNSTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKAMEGRREL 198
>gi|228989234|ref|ZP_04149228.1| hypothetical protein bpmyx0001_140 [Bacillus pseudomycoides DSM
12442]
gi|228995417|ref|ZP_04155088.1| hypothetical protein bmyco0003_230 [Bacillus mycoides Rock3-17]
gi|229003031|ref|ZP_04160889.1| hypothetical protein bmyco0002_240 [Bacillus mycoides Rock1-4]
gi|228758231|gb|EEM07418.1| hypothetical protein bmyco0002_240 [Bacillus mycoides Rock1-4]
gi|228764343|gb|EEM13219.1| hypothetical protein bmyco0003_230 [Bacillus mycoides Rock3-17]
gi|228770509|gb|EEM19079.1| hypothetical protein bpmyx0001_140 [Bacillus pseudomycoides DSM
12442]
Length = 198
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+++ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICDDSHRDQSVVCVVQEAKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEVTLSKALEGRREI 198
>gi|331270684|ref|YP_004397176.1| recombination protein RecR [Clostridium botulinum BKT015925]
gi|329127234|gb|AEB77179.1| recombination protein RecR [Clostridium botulinum BKT015925]
Length = 201
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M IE LI+ A++PG G ++A+R TLH++ + A A+ +
Sbjct: 1 MNNLDFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPNDEVREFANALVKARGTIRY 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CS+CGN +DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+
Sbjct: 61 CSVCGNYTDSDPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
GPEDI ++ LI RI +++E+I A + +EG+ TA YI LK + VK+TR+A+GIP+
Sbjct: 121 KGPEDINLKGLITRI-KGEVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGIPV 179
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L+Y D+ T+ +A+ R L
Sbjct: 180 GGDLEYADEVTLSKALEGRVEL 201
>gi|300853307|ref|YP_003778291.1| putative recombination protein RecR [Clostridium ljungdahlii DSM
13528]
gi|300433422|gb|ADK13189.1| predicted recombination protein RecR [Clostridium ljungdahlii DSM
13528]
Length = 198
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 81/198 (40%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TL+++ + A+A+ N + CS+C
Sbjct: 2 DFYPAAIEKLIEEFAKLPGIGYKTAQRLTLYILNLPGDEVKEFAKALVNARGTIRYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPCAIC + RD SVI VVE D+ A+ER K N +YHVL G++SP+ GP
Sbjct: 62 GNFTDSDPCAICSNPNRDKSVICVVEQPKDIMAMERIKEYNGVYHVLHGNISPMAGRGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI ++E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G L
Sbjct: 122 DIKLKELITRI-NGNVKEVIVATNPNVEGEATAMYISKILKHLGVKVTRIAHGIPVGGNL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEITLSKALEGRVEI 198
>gi|30260215|ref|NP_842592.1| recombination protein RecR [Bacillus anthracis str. Ames]
gi|47525276|ref|YP_016625.1| recombination protein RecR [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183059|ref|YP_026311.1| recombination protein RecR [Bacillus anthracis str. Sterne]
gi|65317487|ref|ZP_00390446.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Bacillus anthracis str. A2012]
gi|165873224|ref|ZP_02217835.1| recombination protein RecR [Bacillus anthracis str. A0488]
gi|167642054|ref|ZP_02400281.1| recombination protein RecR [Bacillus anthracis str. A0193]
gi|170707503|ref|ZP_02897956.1| recombination protein RecR [Bacillus anthracis str. A0389]
gi|177655675|ref|ZP_02937000.1| recombination protein RecR [Bacillus anthracis str. A0174]
gi|190569334|ref|ZP_03022226.1| recombination protein RecR [Bacillus anthracis Tsiankovskii-I]
gi|227812698|ref|YP_002812707.1| recombination protein RecR [Bacillus anthracis str. CDC 684]
gi|229603389|ref|YP_002864676.1| recombination protein RecR [Bacillus anthracis str. A0248]
gi|254736999|ref|ZP_05194704.1| recombination protein RecR [Bacillus anthracis str. Western North
America USA6153]
gi|254751188|ref|ZP_05203227.1| recombination protein RecR [Bacillus anthracis str. Vollum]
gi|254761658|ref|ZP_05213676.1| recombination protein RecR [Bacillus anthracis str. Australia 94]
gi|33301485|sp|Q81W16|RECR_BACAN RecName: Full=Recombination protein recR
gi|254790747|sp|C3P9H0|RECR_BACAA RecName: Full=Recombination protein recR
gi|254790748|sp|C3LIZ7|RECR_BACAC RecName: Full=Recombination protein recR
gi|30253536|gb|AAP24078.1| recombination protein RecR [Bacillus anthracis str. Ames]
gi|47500424|gb|AAT29100.1| recombination protein RecR [Bacillus anthracis str. 'Ames
Ancestor']
gi|49176986|gb|AAT52362.1| recombination protein RecR [Bacillus anthracis str. Sterne]
gi|164711022|gb|EDR16588.1| recombination protein RecR [Bacillus anthracis str. A0488]
gi|167509988|gb|EDR85407.1| recombination protein RecR [Bacillus anthracis str. A0193]
gi|170127499|gb|EDS96373.1| recombination protein RecR [Bacillus anthracis str. A0389]
gi|172080015|gb|EDT65115.1| recombination protein RecR [Bacillus anthracis str. A0174]
gi|190559556|gb|EDV13549.1| recombination protein RecR [Bacillus anthracis Tsiankovskii-I]
gi|227003148|gb|ACP12891.1| recombination protein RecR [Bacillus anthracis str. CDC 684]
gi|229267797|gb|ACQ49434.1| recombination protein RecR [Bacillus anthracis str. A0248]
Length = 198
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 120/195 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP+ IGPEDI
Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|291532774|emb|CBL05887.1| recombination protein RecR [Megamonas hypermegale ART12/1]
Length = 198
Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats.
Identities = 77/194 (39%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + LI+ +PG G ++A R H++ + LA+A+ K+ CS C N+
Sbjct: 5 EPMAKLIEHFRTLPGIGSKTAVRLAYHILDMEPAQAKALAQAIIEAKEKIGFCSCCFNLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TDPCAIC RD S+I VVE D+ A+ER + +YHVL G+LSP++ +GPEDI I
Sbjct: 65 DTDPCAICTSSNRDHSIICVVEHPKDVVAMERMRDYKGVYHVLHGALSPIEGVGPEDIHI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ K++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L+Y D
Sbjct: 125 KELLNRLYDDKVKEVIMATNPNIEGEATAMYIAKLLKPLGIKVTRIAHGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ +AI +R +
Sbjct: 185 EVTLAKAIENRREM 198
>gi|229015427|ref|ZP_04172430.1| hypothetical protein bcere0030_250 [Bacillus cereus AH1273]
gi|229021632|ref|ZP_04178220.1| hypothetical protein bcere0029_140 [Bacillus cereus AH1272]
gi|229074085|ref|ZP_04207134.1| hypothetical protein bcere0024_140 [Bacillus cereus Rock4-18]
gi|229094745|ref|ZP_04225753.1| hypothetical protein bcere0020_140 [Bacillus cereus Rock3-29]
gi|229100811|ref|ZP_04231629.1| hypothetical protein bcere0019_230 [Bacillus cereus Rock3-28]
gi|229113699|ref|ZP_04243136.1| hypothetical protein bcere0017_140 [Bacillus cereus Rock1-3]
gi|228669765|gb|EEL25170.1| hypothetical protein bcere0017_140 [Bacillus cereus Rock1-3]
gi|228682618|gb|EEL36677.1| hypothetical protein bcere0019_230 [Bacillus cereus Rock3-28]
gi|228688683|gb|EEL42553.1| hypothetical protein bcere0020_140 [Bacillus cereus Rock3-29]
gi|228709048|gb|EEL61172.1| hypothetical protein bcere0024_140 [Bacillus cereus Rock4-18]
gi|228739678|gb|EEL90086.1| hypothetical protein bcere0029_140 [Bacillus cereus AH1272]
gi|228745869|gb|EEL95868.1| hypothetical protein bcere0030_250 [Bacillus cereus AH1273]
Length = 198
Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 121/195 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD +V+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICDDSHRDQTVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y
Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 183 ADEVTLSKALEGRRE 197
>gi|297193078|ref|ZP_06910476.1| recombination protein recR [Streptomyces pristinaespiralis ATCC
25486]
gi|197719792|gb|EDY63700.1| recombination protein recR [Streptomyces pristinaespiralis ATCC
25486]
Length = 199
Score = 311 bits (799), Expect = 2e-83, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLAHALLEVKDKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQQEQCNICRDPRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|222152176|ref|YP_002561336.1| recombination protein RecR [Macrococcus caseolyticus JCSC5402]
gi|254790774|sp|B9E8X2|RECR_MACCJ RecName: Full=Recombination protein recR
gi|222121305|dbj|BAH18640.1| recombination protein RecR [Macrococcus caseolyticus JCSC5402]
Length = 198
Score = 311 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 129/196 (65%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG GP++A R H++ KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPAPISKLIDSFMKLPGIGPKTASRLAFHVLDMKEDDVVGFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D+ RD S+I VVE+ D+ A+E+ + LYHVL G++SP++ +GPEDI
Sbjct: 63 ITDTDPCYICEDKTRDQSMICVVEETKDVIAMEKMREYKGLYHVLHGAISPMEGVGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ SL+ R+ + I+ELI A + IEG++TA YI +K I +K+TRLA+G+P+G +L+Y
Sbjct: 123 NVPSLLTRLRDEHIQELILATNPNIEGESTAMYIARLVKPIGIKVTRLAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAITGRTEI 198
>gi|242372723|ref|ZP_04818297.1| recombination protein RecR [Staphylococcus epidermidis M23864:W1]
gi|242349640|gb|EES41241.1| recombination protein RecR [Staphylococcus epidermidis M23864:W1]
Length = 198
Score = 311 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 82/196 (41%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H + KE + A+++ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKSLVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SV+ VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITENDPCYICEDKQRDRSVVCVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPALVERLKSDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|332800255|ref|YP_004461754.1| Recombination protein recR [Tepidanaerobacter sp. Re1]
gi|332697990|gb|AEE92447.1| Recombination protein recR [Tepidanaerobacter sp. Re1]
Length = 198
Score = 311 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 129/197 (65%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP++A+R +++K + + LA+A+ + CSICG
Sbjct: 3 YYAEPLDRLIGELSRLPGIGPKTAQRLAFYILKMSKDRVESLADAILQAKELITYCSICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DPC+IC RD + I+VVED D+ A+E+++ LYHVL G++SPL+ IGP+D
Sbjct: 63 NFTDVDPCSICQTPYRDKNTIMVVEDPKDIVAMEKTRDYKGLYHVLHGAISPLEGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L+ RI +I+E+I A + +EG+ TA Y+ LK +DVK+TR+AYGIPMG +L+
Sbjct: 123 IKIKELLARI-TPEIKEIILATNPNVEGEATAMYLAKLLKPLDVKVTRIAYGIPMGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R +
Sbjct: 182 YADEVTLTKALEGRQKI 198
>gi|253577377|ref|ZP_04854694.1| recombination protein RecR [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843277|gb|EES71308.1| recombination protein RecR [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 202
Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 131/202 (64%), Gaps = 3/202 (1%)
Query: 1 MQKK---ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
M++K + I LI +PG GP++A R H++ KE + A+A+ ++ +
Sbjct: 1 MKEKAPLYYPEPIAKLIDAFTHLPGIGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNL 60
Query: 58 CLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117
CSIC N+ TDPC IC D+ RDASVI VV++ DL A+ER+K + YHVL G++SP+
Sbjct: 61 HYCSICCNITDTDPCRICQDKTRDASVICVVQESKDLVAMERTKEFDGYYHVLQGAISPM 120
Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
+ +GP+DI ++ L+ R+ ++++ELI A + IEG+ TA YI +K D+++TR+A+G+
Sbjct: 121 EGLGPDDIRLKELLNRLSDERVKELILATNPNIEGEATAMYISRLVKPFDIRVTRIAHGL 180
Query: 178 PMGSELDYLDDGTIFEAIRSRT 199
P+G +L+Y D+ T+ +A+ R
Sbjct: 181 PVGGDLEYADEVTLSKALEGRR 202
>gi|117929222|ref|YP_873773.1| recombination protein RecR [Acidothermus cellulolyticus 11B]
gi|171460820|sp|A0LWH7|RECR_ACIC1 RecName: Full=Recombination protein recR
gi|117649685|gb|ABK53787.1| DNA replication and repair protein RecR [Acidothermus
cellulolyticus 11B]
Length = 199
Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 127/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L ++PG GP+SA+R H++ + LAE + ++ ++ C+ICG
Sbjct: 1 MYEGVIQDLIDELGKLPGIGPKSAQRIAFHILGADPSQVRRLAEVLLDVKERIRFCAICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +V+ VVE+ D+ A+E+++ + YHVLGG++SP+D IGP+D
Sbjct: 61 NVAEHEQCRICADPRRDPTVLCVVEEPKDVVAIEKTREFHGRYHVLGGAISPIDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ ++ELI A +EG+ TA Y+ +K + V++TRLA G+P+G +L+
Sbjct: 121 LRIRELLQRLADGTVKELILATDPNLEGEATATYLARLVKPLGVRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 181 YADEVTLGRALEGRRQL 197
>gi|261404009|ref|YP_003240250.1| recombination protein RecR [Paenibacillus sp. Y412MC10]
gi|329930213|ref|ZP_08283826.1| recombination protein RecR [Paenibacillus sp. HGF5]
gi|261280472|gb|ACX62443.1| recombination protein RecR [Paenibacillus sp. Y412MC10]
gi|328935235|gb|EGG31716.1| recombination protein RecR [Paenibacillus sp. HGF5]
Length = 199
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 129/197 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI R+PG GP++A R H++ KE + A+A+ ++ + CS+C
Sbjct: 2 YYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSVCC 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TDPC +C D+ RDAS+I VV+D DL A+ER+K YHVL G++SP++ IGP++
Sbjct: 62 NITDTDPCRVCQDKTRDASIICVVQDAKDLVAMERTKEFEGYYHVLHGAISPMEGIGPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ L+ R+ ++++ELI A +A IEG+ TA YI ++ D+K+TR+A+G+P+G +L+
Sbjct: 122 IRLKELLTRLSDERVKELILATNANIEGEATAMYISRLVRPFDIKVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R L
Sbjct: 182 YADEVTLSKALEGRREL 198
>gi|168187926|ref|ZP_02622561.1| recombination protein RecR [Clostridium botulinum C str. Eklund]
gi|169294228|gb|EDS76361.1| recombination protein RecR [Clostridium botulinum C str. Eklund]
Length = 198
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+C
Sbjct: 2 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GPE
Sbjct: 62 GNYTDSDPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 122 DINLKGLIRRI-NENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 181 EYADEVTLSKALEGRVEL 198
>gi|51891153|ref|YP_073844.1| recombination protein RecR [Symbiobacterium thermophilum IAM 14863]
gi|73621522|sp|Q67TJ3|RECR_SYMTH RecName: Full=Recombination protein recR
gi|51854842|dbj|BAD39000.1| recombination protein [Symbiobacterium thermophilum IAM 14863]
Length = 198
Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ L ++PG GP++A+R H++ + ++ +A + KV CS+C
Sbjct: 2 YYAEPIARLIEELTKLPGIGPKTAQRLAFHILHMEPSVVEGIARTLVEARAKVKYCSVCC 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD S I VV++ D+ A+E+++ + +YHVL G+L+P++ IG +D
Sbjct: 62 NLTDQDPCQICADDGRDHSTICVVQEPRDVVAMEKTREYHGVYHVLHGALNPMEGIGIDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ L+ R+ +++E+I + EG+TTA YI +K + VK+TR+A G+PMG +L+
Sbjct: 122 IRVKELVARLGDGRVQEVILCTNPNTEGETTAMYIARYIKPLGVKVTRIARGLPMGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R +
Sbjct: 182 YADEVTLAKALEGRREI 198
>gi|332654895|ref|ZP_08420637.1| recombination protein RecR [Ruminococcaceae bacterium D16]
gi|332516238|gb|EGJ45846.1| recombination protein RecR [Ruminococcaceae bacterium D16]
Length = 200
Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ +ENL++ A++PG G +SA+R H++ E A+A+ + + C +C
Sbjct: 2 QYFPPALENLVEQFAKLPGVGVKSAQRLAFHVLSMPEDEAAAFAQAILTAKSTIHCCPVC 61
Query: 64 GNVDTTD-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
N+ + PC+IC +RDAS I VV D D+ A+ERS+ LYHVL G +SP++ +GP
Sbjct: 62 QNLTQGEGPCSICSSPRRDASTICVVADPKDVVAMERSREYQGLYHVLHGVISPMNHVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+D+ I+SL+ER+ + E+I A + EG+ TA Y+ L+ VK+TRLAYGIP+GS
Sbjct: 122 DDLHIKSLVERVSAGGVDEVIMATNPDTEGEATAMYLSRLLRPFGVKVTRLAYGIPVGSH 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y DD T+ A+ R +
Sbjct: 182 LEYADDATLMRALEGRREM 200
>gi|28209847|ref|NP_780791.1| recombination protein RecR [Clostridium tetani E88]
gi|73621479|sp|Q899U3|RECR_CLOTE RecName: Full=Recombination protein recR
gi|28202282|gb|AAO34728.1| recombination protein recR [Clostridium tetani E88]
Length = 198
Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++PG G ++A+R TL+++ + + A A+ + CS+C
Sbjct: 2 EFYPIAIEKLIEEFAKLPGIGKKTAQRLTLYVLNLPREEVEEFANALIKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPCAIC + RD + I VVE D+ +E+ + N +YHVL G++SP+ GP
Sbjct: 62 GNFTDKDPCAICSNPNRDKNTICVVEHPKDIMTMEKVREYNGMYHVLHGTISPMAGRGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI +I+E+I A + +EG+ TA YI LK + K+TR+A+GIP+G +L
Sbjct: 122 DIKLKELISRI-NGEIKEVIVATNPNVEGEATAMYISKILKPLGAKVTRIAHGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLAKALEGRKEI 198
>gi|228474164|ref|ZP_04058901.1| recombination protein RecR [Staphylococcus hominis SK119]
gi|228271859|gb|EEK13196.1| recombination protein RecR [Staphylococcus hominis SK119]
Length = 198
Score = 310 bits (796), Expect = 5e-83, Method: Composition-based stats.
Identities = 83/196 (42%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R + + KE + A+A+ ++ ++ CSICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCSICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD S+I VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|323488474|ref|ZP_08093720.1| recombination protein RecR [Planococcus donghaensis MPA1U2]
gi|323397866|gb|EGA90666.1| recombination protein RecR [Planococcus donghaensis MPA1U2]
Length = 198
Score = 310 bits (796), Expect = 5e-83, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L++ ++PG GP++A R ++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPISKLMESFMKLPGIGPKTAARLAFFVLGMKEDTVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC DQQRD + I VV+D D+ A+E+ + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDVDPCHICQDQQRDRTTICVVQDPKDVIAMEKMRDYKGLYHVLQGAISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ SL++R++ +++ ELI A + TIEG+ TA YI ++ ++ TR+A+G+P+G +L+Y
Sbjct: 123 NVPSLLKRLQDEEVEELILATNPTIEGEATAMYISRLVRPSGIRTTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLSKALEGRREL 198
>gi|239637705|ref|ZP_04678675.1| recombination protein RecR [Staphylococcus warneri L37603]
gi|239596730|gb|EEQ79257.1| recombination protein RecR [Staphylococcus warneri L37603]
Length = 198
Score = 310 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R + H + KE + A+A+ ++ ++ CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLSFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITEKDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREFKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPALVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|167629259|ref|YP_001679758.1| recombination protein recr [Heliobacterium modesticaldum Ice1]
gi|229890152|sp|B0TB20|RECR_HELMI RecName: Full=Recombination protein recR
gi|167591999|gb|ABZ83747.1| recombination protein recr [Heliobacterium modesticaldum Ice1]
Length = 199
Score = 310 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + LI+ L+++PG GP++A+R HL+ LA+A+ ++K CS+C
Sbjct: 2 RYYAEPVGRLIEELSKLPGVGPKTAQRLAFHLLHVPRNEAVALAKAIVEAHDKTLYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC IC D RD +VI VVE+ D+ A+E+++ YHVL G+LSP++ +GPE
Sbjct: 62 TNLTDRDPCRICSDANRDRAVICVVEEPRDVVAVEKTREYRGHYHVLHGALSPIEGVGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I L+ R+ +++E+I A + T+EG+ TA Y+ +K + VK+TR+A+G+P+G +L
Sbjct: 122 QLRISQLMARLADPELKEVIVATNPTVEGEATAAYLARLIKPMGVKVTRIAHGLPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D T+ A+ R L
Sbjct: 182 EYADQVTLLRAMEGRREL 199
>gi|160933399|ref|ZP_02080787.1| hypothetical protein CLOLEP_02244 [Clostridium leptum DSM 753]
gi|156867276|gb|EDO60648.1| hypothetical protein CLOLEP_02244 [Clostridium leptum DSM 753]
Length = 200
Score = 310 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ L++ R+PG G ++A+R H+++ ++ A+A+ + + K+ CS+C N+
Sbjct: 8 PLSRLVEQFERLPGIGRKTAQRLAYHVLQLPKKEAENFAQAILDAHEKIHYCSVCCNLTD 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C++C ++ R+ VI VVED D+ A ER+ + YHVL G +SPL IGP+ + I+
Sbjct: 68 QELCSVCRNEAREKGVICVVEDPRDVAAFERTHEYSGAYHVLHGVISPLGGIGPDQLKIK 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R+ ++E+I A + T+EG+ TA Y+ LK + +K+TRLAYGIP+G +L+Y D+
Sbjct: 128 ELLDRVNRGGVKEVIMATNPTVEGEATAMYLSRLLKPLGIKVTRLAYGIPVGGDLEYADE 187
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R
Sbjct: 188 VTLSRALAGRQEF 200
>gi|56961821|ref|YP_173543.1| recombination protein RecR [Bacillus clausii KSM-K16]
gi|73621463|sp|Q5WLZ3|RECR_BACSK RecName: Full=Recombination protein recR
gi|56908055|dbj|BAD62582.1| recombinational DNA repair protein RecR [Bacillus clausii KSM-K16]
Length = 199
Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ R+PG GP++A R H++ KE + A+A+ + + CS C N
Sbjct: 3 YPRPIAKLIEGFTRLPGIGPKTASRLAFHVLDMKEDDVLEFAKALVHAKRDLTYCSQCHN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D+ RD + I VV++ DL A+E+ + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDTDPCQICEDKHRDRTTICVVQESRDLIAMEKMREYTGLYHVLHGAISPMDGIGPEDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I LI+R + + ++E+I A + TIEG+ TA YI +K +K+TRLA+G+P+G +L+
Sbjct: 123 KIAELIKRLQDDESVKEVIVATNPTIEGEATAMYISRLIKPTGIKVTRLAHGLPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +AI R L
Sbjct: 183 YADEVTLSKAIEGRREL 199
>gi|253682739|ref|ZP_04863535.1| recombination protein RecR [Clostridium botulinum D str. 1873]
gi|253561061|gb|EES90514.1| recombination protein RecR [Clostridium botulinum D str. 1873]
Length = 198
Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+C
Sbjct: 2 DFYPVVIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPNDEVREFANALVKARGTIRYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GPE
Sbjct: 62 GNYTDSDPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI +++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 122 DINLKGLITRI-KGEVKEIIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 181 EYADEVTLSKALEGRVEL 198
>gi|269129056|ref|YP_003302426.1| recombination protein RecR [Thermomonospora curvata DSM 43183]
gi|268314014|gb|ACZ00389.1| recombination protein RecR [Thermomonospora curvata DSM 43183]
Length = 199
Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R HL+ + LA+A+ + +KV C +CG
Sbjct: 1 MYEGVVQNLIDELGRLPGIGPKSAQRIAFHLLAADPADVDRLAKALKEVKDKVRFCRVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+E+++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEEEECRICRDPRRDPAVICVVEESKDVVAIEKTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ + ELI A +EG+ TA Y+ +K +++K+TRLA G+P+G +L+
Sbjct: 121 LRIRELMQRLADGTVTELILATDPNLEGEATATYLARLVKPLNLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|118445158|ref|YP_879265.1| recombination protein RecR [Clostridium novyi NT]
gi|118135614|gb|ABK62658.1| recombination protein RecR [Clostridium novyi NT]
Length = 201
Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + IE LI+ A++PG G ++A+R TLH++ + A A+ +
Sbjct: 1 MNELDFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKY 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CSICGN +DPCAIC + RD S+I V+E D+ +LE+ + N YHVL G +SP+
Sbjct: 61 CSICGNYTDSDPCAICSNPNRDESIICVIEQPKDIMSLEKIREYNGTYHVLHGVISPMSG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
GPEDI ++ LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+
Sbjct: 121 KGPEDINLKGLIRRI-NENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPV 179
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L+Y D+ T+ +A+ R L
Sbjct: 180 GGDLEYADEVTLSKALEGRVEL 201
>gi|15893423|ref|NP_346772.1| recombination protein RecR [Clostridium acetobutylicum ATCC 824]
gi|20139611|sp|Q97MR4|RECR_CLOAB RecName: Full=Recombination protein recR
gi|15022954|gb|AAK78112.1|AE007525_6 Recombination protein (recR) [Clostridium acetobutylicum ATCC 824]
gi|325507535|gb|ADZ19171.1| recombination protein RecR [Clostridium acetobutylicum EA 2018]
Length = 198
Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++PG G ++A+R T+H++ ++ + A+A+ + CS+C
Sbjct: 2 EFYPVAIEKLIEEFAKLPGVGYKTAQRLTMHVLNLPKEEVEGFADALKKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TDPCAIC + RD S++ VVE+ D+ ++E+ + N +YHVL G +SP+ GP+
Sbjct: 62 GNYTDTDPCAICSNPNRDKSLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I ++ L+ R+ K++E+I A + ++G+ TA YI LK + VK+TR+A+GIP+G +L
Sbjct: 122 SIKLRELVSRM-NGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLAKALEGRREI 198
>gi|269836976|ref|YP_003319204.1| recombination protein RecR [Sphaerobacter thermophilus DSM 20745]
gi|269786239|gb|ACZ38382.1| recombination protein RecR [Sphaerobacter thermophilus DSM 20745]
Length = 201
Score = 309 bits (794), Expect = 9e-83, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ ++T + + LI ++PG GP++A R H+++ + LAEA+ + ++ LC
Sbjct: 1 MRSRVTAEPVAKLIDEFGKLPGVGPKTASRLAYHILRSDREEAVALAEAILEVKERIVLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N+ DPC IC D+QRD I VVE+ D+ AL+R+ N LYHVL G LSP+D I
Sbjct: 61 STCFNITEHDPCPICSDEQRDRRTICVVEEPLDVVALDRTGEYNGLYHVLHGVLSPVDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + I+ L+ R++ E+I A++ IEG TA YI +L + V +TR A G+P+G
Sbjct: 121 GPDRLRIRELVARVQADPPDEVILALNPNIEGDATAMYIARQLLPLGVTVTRPASGLPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ A+ R L
Sbjct: 181 GDLEYADEVTLGRALAGRRAL 201
>gi|326203228|ref|ZP_08193093.1| recombination protein RecR [Clostridium papyrosolvens DSM 2782]
gi|325986486|gb|EGD47317.1| recombination protein RecR [Clostridium papyrosolvens DSM 2782]
Length = 199
Score = 309 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 120/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + L++ ++PG G +SA+R H++ + + L+E++ K CS+C
Sbjct: 2 EYYAVPVAKLVEEFQKLPGIGHKSAQRLAFHVINMPMEKVQKLSESILEAKQKTRYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC +C RD +VI VV+D D+ A+ER++ LYHVL G++SP+ IGPE
Sbjct: 62 SNLTDVDPCPLCSGTSRDKTVICVVQDPRDVVAMERTREFKGLYHVLHGAISPMQGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+I I+ LI R+ ++ E+I A + +EG+ TA YI +K + VK TR+A+GIP+G +L
Sbjct: 122 EIRIKELIARLGSGEVTEVILATNPNVEGEATAMYISKLIKPLGVKATRIAHGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 182 EYADEVTLAKALEGRREI 199
>gi|172044114|sp|A0Q3R3|RECR_CLONN RecName: Full=Recombination protein recR
Length = 198
Score = 309 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TLH++ + A A+ + CSIC
Sbjct: 2 DFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPCAIC + RD S+I V+E D+ +LE+ + N YHVL G +SP+ GPE
Sbjct: 62 GNYTDSDPCAICSNPNRDESIICVIEQPKDIMSLEKIREYNGTYHVLHGVISPMSGKGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 122 DINLKGLIRRI-NENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 181 EYADEVTLSKALEGRVEL 198
>gi|314935125|ref|ZP_07842478.1| recombination protein RecR [Staphylococcus hominis subsp. hominis
C80]
gi|313656460|gb|EFS20199.1| recombination protein RecR [Staphylococcus hominis subsp. hominis
C80]
Length = 198
Score = 309 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 83/196 (42%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R + + KE + A+A+ ++ ++ C+ICG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCNICGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+QRD S+I VVED D+ A+E+ K LYHVL GS+SP+D IGPEDI
Sbjct: 63 ITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMKEYKGLYHVLHGSISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y
Sbjct: 123 NIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI RT +
Sbjct: 183 ADEVTLSKAIAGRTEM 198
>gi|323701678|ref|ZP_08113350.1| recombination protein RecR [Desulfotomaculum nigrificans DSM 574]
gi|323533451|gb|EGB23318.1| recombination protein RecR [Desulfotomaculum nigrificans DSM 574]
Length = 200
Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ L+ A++PG GP++A+R H++ + LA A+ + + CSIC
Sbjct: 3 YYSGPVARLVDEFAKLPGIGPKTAQRLAFHILNAPPEAAQNLARALIEVRQSIKRCSICC 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D R+ ++ VVE+ D+ A+E+++ LYHVL G++SP++ +GP++
Sbjct: 63 NLTDEDPCHICRDTTRNPKILCVVEEPRDVVAMEKARGYRGLYHVLHGAISPIEGVGPDN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R++ ++ E+I A ++ +EG+TTA Y+ LK + VK+TR+A+GIP+GS+L+
Sbjct: 123 LTIKELLNRLQTGEVEEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +A+ R
Sbjct: 183 YADAMTLNKALEGRGEF 199
>gi|302559463|ref|ZP_07311805.1| recombination protein RecR [Streptomyces griseoflavus Tu4000]
gi|302477081|gb|EFL40174.1| recombination protein RecR [Streptomyces griseoflavus Tu4000]
Length = 199
Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALMEVKAKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D
Sbjct: 61 NVAQEEQCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|297158533|gb|ADI08245.1| recombination protein RecR [Streptomyces bingchenggensis BCW-1]
Length = 199
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPADVRRLAHALTEVKDKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C +C D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEAEQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLTRLADGTVTELILATDPNLEGEATATYLARMVKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|317120923|ref|YP_004100926.1| DNA replication and repair protein RecR [Thermaerobacter
marianensis DSM 12885]
gi|315590903|gb|ADU50199.1| DNA replication and repair protein RecR [Thermaerobacter
marianensis DSM 12885]
Length = 199
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 119/196 (60%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
LI L ++PG GP++A+R HL+ + + + LAEAM V CSIC N+
Sbjct: 4 APAFARLIAELEKLPGIGPKTAQRLAYHLLFRPQDEVRALAEAMVQARASVRYCSICFNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC +C D RDA VI VVE D+ A+ER++ YHVL G +SP+D IGPE +
Sbjct: 64 TDRDPCPVCRDPGRDARVICVVEQPRDVVAMERTREFRGRYHVLHGVISPMDGIGPEQLR 123
Query: 127 IQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R+ + + E+I A + T+EG+ TA Y+ +K + +++TR+A G+P G +L+Y
Sbjct: 124 VRELLARLRQDPPVDEVILATNPTVEGEATALYLARLIKPLGIRVTRIARGVPEGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A++ R L
Sbjct: 184 VDELTLTRALQGRQAL 199
>gi|291562957|emb|CBL41773.1| recombination protein RecR [butyrate-producing bacterium SS3/4]
Length = 199
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 125/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G ++A+R H++ E+ + L+ ++ + + V C C
Sbjct: 2 DYYSSQISKLIEELSKLPGIGNKTAQRLAFHIINMPEEQVERLSSSIRDAKHNVHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC Q RD SVI+VVE+ DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDQELCPICRSQTRDHSVIMVVENPRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R++ ++++E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIKLKELMMRLQTEEVKEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLLRALEGRVEL 199
>gi|255284260|ref|ZP_05348815.1| recombination protein RecR [Bryantella formatexigens DSM 14469]
gi|255265213|gb|EET58418.1| recombination protein RecR [Bryantella formatexigens DSM 14469]
Length = 198
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 124/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ ++I LI+ +++PG G +SA+R H++ + E+ + LA+A+ + V C C
Sbjct: 2 EYYSRQISRLIEEFSKLPGIGAKSAQRMAFHIINRPEEEVKALAQAILDAKENVRYCKQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ ++ C IC + +RDA I+VVE+ DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 FTLTDSELCPICSNPKRDAKTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIRLKELMQRL-QGDVNEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D T+ A+ RT L
Sbjct: 181 EYIDQVTLLRALEGRTEL 198
>gi|302544192|ref|ZP_07296534.1| recombination protein RecR [Streptomyces hygroscopicus ATCC 53653]
gi|302461810|gb|EFL24903.1| recombination protein RecR [Streptomyces himastatinicus ATCC 53653]
Length = 199
Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTEVKEKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C +C D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEAEQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|189023296|ref|YP_001934064.1| recombination protein RecR [Brucella abortus S19]
gi|225626581|ref|ZP_03784620.1| recombination protein RecR [Brucella ceti str. Cudo]
gi|237814507|ref|ZP_04593505.1| recombination protein RecR [Brucella abortus str. 2308 A]
gi|297247439|ref|ZP_06931157.1| recombination protein RecR [Brucella abortus bv. 5 str. B3196]
gi|189018868|gb|ACD71590.1| recombination protein RecR [Brucella abortus S19]
gi|225618238|gb|EEH15281.1| recombination protein RecR [Brucella ceti str. Cudo]
gi|237789344|gb|EEP63554.1| recombination protein RecR [Brucella abortus str. 2308 A]
gi|297174608|gb|EFH33955.1| recombination protein RecR [Brucella abortus bv. 5 str. B3196]
Length = 232
Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 92 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 152 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 212 GELDYLDEGTLAAALRARTTL 232
>gi|21222034|ref|NP_627813.1| recombination protein RecR [Streptomyces coelicolor A3(2)]
gi|256786880|ref|ZP_05525311.1| recombination protein RecR [Streptomyces lividans TK24]
gi|289770774|ref|ZP_06530152.1| recombination protein RecR [Streptomyces lividans TK24]
gi|6685844|sp|Q9XAI4|RECR_STRCO RecName: Full=Recombination protein recR
gi|5748805|gb|AAD34032.2|AF151381_2 recombination protein RecR [Streptomyces coelicolor A3(2)]
gi|5123893|emb|CAB45485.1| putative recomination protein [Streptomyces coelicolor A3(2)]
gi|289700973|gb|EFD68402.1| recombination protein RecR [Streptomyces lividans TK24]
Length = 199
Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C+ CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPVDVRRLAQALMEVKAKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D
Sbjct: 61 NVAQEEQCNICRDTRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|260589050|ref|ZP_05854963.1| recombination protein RecR [Blautia hansenii DSM 20583]
gi|331083244|ref|ZP_08332357.1| recombination protein recR [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540829|gb|EEX21398.1| recombination protein RecR [Blautia hansenii DSM 20583]
gi|330404325|gb|EGG83870.1| recombination protein recR [Lachnospiraceae bacterium 6_1_63FAA]
Length = 199
Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI+ +R+PG G +SA+R H++ ++ + LA A+ N V C C
Sbjct: 2 EYYSSHINKLIEEFSRLPGIGAKSAQRLAFHVLNMPKEQVEQLAGAITNAKANVQYCKCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +R+ VI+VVE+ DL A E++ + +YHVL G++SP+ IGP+
Sbjct: 62 YTLTDQEICPICKNPKRNHQVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++RI I E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMQRISQNDIEEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLLRALEGRVEL 199
>gi|254520805|ref|ZP_05132861.1| recombination protein RecR [Clostridium sp. 7_2_43FAA]
gi|226914554|gb|EEH99755.1| recombination protein RecR [Clostridium sp. 7_2_43FAA]
Length = 198
Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++P G ++A+R LH++ E + A+A+ + CSIC
Sbjct: 2 DFYPVAIEKLIEEFAKLPSVGQKTAQRLALHVLNLPEDEVKEFADALVKARGTIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPC+IC + RD +I VVE D+ +E+ K N YHVL G+LSP+ GP+
Sbjct: 62 GNFTDKDPCSICSNPSRDKDIICVVEQPKDIMTMEKVKEYNGAYHVLHGNLSPMQGRGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ ++E+I A + IEG+ TA YI LK +D+K+TR+A GIP+G +L
Sbjct: 122 DIRIRELVARMSA-DVKEVIIATNPNIEGEATAMYISRILKPLDIKVTRIASGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLSKALEGRKEI 198
>gi|332971096|gb|EGK10064.1| recombination protein R [Desmospora sp. 8437]
Length = 198
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 125/195 (64%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ I LI R+PG GP++A+R ++ +E+ + LA+A+ + + C +C N+
Sbjct: 4 PEPISKLIDGFMRLPGIGPKTAQRLAFFVLGMEEEDVMELAKALVHAKRDLKRCQVCSNI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C++C D+ RD S+I VV+D D+ A+ER++ LYHVL G++SP++ IGP+++
Sbjct: 64 TDQPVCSVCRDKSRDRSMICVVQDPRDVIAMERTREYAGLYHVLHGAISPMEGIGPDELS 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L++R+E + ++E+I A + IEG+ TA Y+ +K +K+TR+A+G+P+G +L+Y
Sbjct: 124 IPDLLKRLEDETVQEMILATNPNIEGEATAMYLQRLVKPFGIKVTRIAHGLPVGGDLEYA 183
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 184 DEVTLTKALEGRREL 198
>gi|18309029|ref|NP_560963.1| recombination protein RecR [Clostridium perfringens str. 13]
gi|110801227|ref|YP_694520.1| recombination protein RecR [Clostridium perfringens ATCC 13124]
gi|110802201|ref|YP_697399.1| recombination protein RecR [Clostridium perfringens SM101]
gi|168206161|ref|ZP_02632166.1| recombination protein RecR [Clostridium perfringens E str. JGS1987]
gi|168210524|ref|ZP_02636149.1| recombination protein RecR [Clostridium perfringens B str. ATCC
3626]
gi|168213990|ref|ZP_02639615.1| recombination protein RecR [Clostridium perfringens CPE str. F4969]
gi|168217759|ref|ZP_02643384.1| recombination protein RecR [Clostridium perfringens NCTC 8239]
gi|169343382|ref|ZP_02864386.1| recombination protein RecR [Clostridium perfringens C str. JGS1495]
gi|182625381|ref|ZP_02953154.1| recombination protein RecR [Clostridium perfringens D str. JGS1721]
gi|20139456|sp|Q8XPB8|RECR_CLOPE RecName: Full=Recombination protein recR
gi|122959143|sp|Q0TV20|RECR_CLOP1 RecName: Full=Recombination protein recR
gi|123047626|sp|Q0SWS6|RECR_CLOPS RecName: Full=Recombination protein recR
gi|18143704|dbj|BAB79753.1| DNA repair and genetic recombination protein [Clostridium
perfringens str. 13]
gi|110675874|gb|ABG84861.1| recombination protein RecR [Clostridium perfringens ATCC 13124]
gi|110682702|gb|ABG86072.1| recombination protein RecR [Clostridium perfringens SM101]
gi|169298468|gb|EDS80554.1| recombination protein RecR [Clostridium perfringens C str. JGS1495]
gi|170662331|gb|EDT15014.1| recombination protein RecR [Clostridium perfringens E str. JGS1987]
gi|170711405|gb|EDT23587.1| recombination protein RecR [Clostridium perfringens B str. ATCC
3626]
gi|170714502|gb|EDT26684.1| recombination protein RecR [Clostridium perfringens CPE str. F4969]
gi|177909378|gb|EDT71830.1| recombination protein RecR [Clostridium perfringens D str. JGS1721]
gi|182380222|gb|EDT77701.1| recombination protein RecR [Clostridium perfringens NCTC 8239]
Length = 198
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++P G +SA+R TLH++ + + A A+ + CS+C
Sbjct: 2 EFYPVAIEKLIEEFAKLPSIGKKSAQRLTLHILNLPKDEVEEFANALVKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TDPCAIC + R+ +I VVE D+ +E+ K N LYHVL G++SP+ GP+
Sbjct: 62 GNFTDTDPCAICSNPNREKDIICVVEQPKDIMTMEKVKEFNGLYHVLHGTISPMQGRGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ ++E+I A + TIEG+ TA YI LK +DVK+TR+A GIP+G +L
Sbjct: 122 DIRIRELVARM-SGDVKEVIVATNPTIEGEATAMYISKILKPLDVKVTRIAAGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ RTV+
Sbjct: 181 EYADEVTLSKALEGRTVI 198
>gi|294630548|ref|ZP_06709108.1| recombination protein RecR [Streptomyces sp. e14]
gi|292833881|gb|EFF92230.1| recombination protein RecR [Streptomyces sp. e14]
Length = 199
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEELCGICRDSRRDQSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|188588858|ref|YP_001922589.1| recombination protein RecR [Clostridium botulinum E3 str. Alaska
E43]
gi|251781258|ref|ZP_04824174.1| recombination protein RecR [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229890143|sp|B2V0W0|RECR_CLOBA RecName: Full=Recombination protein recR
gi|188499139|gb|ACD52275.1| recombination protein RecR [Clostridium botulinum E3 str. Alaska
E43]
gi|243081705|gb|EES47766.1| recombination protein RecR [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 198
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++P G ++A+R TLH++ + + A+A+ + CS C
Sbjct: 2 EFYPVAIEKLIEEFAKLPSIGKKTAQRLTLHILNLPDDEVREFAKALVKAKGTIKYCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TDPCA+C + RD S I VVE D+ +E+ K N LYHVL G++SP+ GP+
Sbjct: 62 GNFTDTDPCALCSNPNRDKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ ++++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L
Sbjct: 122 DIKIRELVARM-NEEVKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLSKALEGRKEI 198
>gi|328883421|emb|CCA56660.1| Recombination protein RecR [Streptomyces venezuelae ATCC 10712]
Length = 204
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 11 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCAVCGNVAQQ 70
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 71 EQCNICRDPRRDLTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 130
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 131 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 190
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 191 TLGRAFEGRRLL 202
>gi|206901227|ref|YP_002251790.1| recombination protein RecR [Dictyoglomus thermophilum H-6-12]
gi|206740330|gb|ACI19388.1| recombination protein RecR [Dictyoglomus thermophilum H-6-12]
Length = 200
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 86/198 (43%), Positives = 128/198 (64%), Gaps = 1/198 (0%)
Query: 5 ITGKEI-ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K I E LI L +IPG GP+SA+R +L+K+ ++ + LA + + ++ CSIC
Sbjct: 1 MAEKSIFEKLIDELTKIPGIGPKSAQRIAFYLLKQPQESVESLANTILKVKKEIKHCSIC 60
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC IC + +RD + I VV + DLWA+E++ N +YHVLGG +SPLD + PE
Sbjct: 61 FNITEKDPCEICSNPERDKTTICVVAEPKDLWAIEKTSKFNGVYHVLGGLISPLDGVFPE 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ LIER++ +I+E+I A +T EG+ TA YI L VK+TRLA+G+P G+EL
Sbjct: 121 DLRIKELIERVKKGEIKEVILATDSTPEGEATAMYIARLLMEYPVKVTRLAHGLPAGTEL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
D+ D+ T+ A+ R L
Sbjct: 181 DFADEITLIHALEGRKEL 198
>gi|295694721|ref|YP_003587959.1| recombination protein RecR [Bacillus tusciae DSM 2912]
gi|295410323|gb|ADG04815.1| recombination protein RecR [Bacillus tusciae DSM 2912]
Length = 199
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 127/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A+R H+++ ++ + L++A+ + + C IC N
Sbjct: 4 FPEPISQLIDGFMKLPGIGPKTAQRLAFHVLRMPDEDVLHLSQALVAVKKDLRYCRICCN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC +C D+ RD VI VV+D D+ A+ER++ + +YHVL G++SP++ IGPEDI
Sbjct: 64 ITDVDPCTLCRDELRDHRVICVVQDPRDVAAMERTREYHGVYHVLHGAISPMEGIGPEDI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ER++ +ELI A + T+EG+ TA ++ +K + VK+TR+A G+PMG +L+Y
Sbjct: 124 RVKELLERMKNDLPKELILATNPTVEGEATAMFLTRLVKPLGVKVTRIARGLPMGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 184 ADELTLSQALEGRREI 199
>gi|220927702|ref|YP_002504611.1| recombination protein RecR [Clostridium cellulolyticum H10]
gi|254790761|sp|B8I551|RECR_CLOCE RecName: Full=Recombination protein recR
gi|219998030|gb|ACL74631.1| recombination protein RecR [Clostridium cellulolyticum H10]
Length = 199
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 120/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I L++ ++PG G +SA+R H++ + + L+E++ K CS+C
Sbjct: 2 EYYAVPIAKLVEEFQKLPGIGHKSAQRLAFHVINLPMEKVQKLSESILEAKQKTRYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC +C RD +VI VV+D D+ A+ER++ LYHVL G++SP+ IGPE
Sbjct: 62 SNLTDIDPCPLCSGTSRDKTVICVVQDPRDVVAMERTREFKGLYHVLHGAISPMQGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+I I+ LI R+ ++E+I A + +EG+ TA YI +K + VK TR+A+GIP+G +L
Sbjct: 122 EIRIKELITRLGSGDVKEVILATNPNVEGEATAMYISKLIKPLGVKATRIAHGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 182 EYADEVTLAKALEGRREI 199
>gi|307332253|ref|ZP_07611333.1| recombination protein RecR [Streptomyces violaceusniger Tu 4113]
gi|306882114|gb|EFN13220.1| recombination protein RecR [Streptomyces violaceusniger Tu 4113]
Length = 199
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTQVKEKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C +C D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEAEQCRVCQDPRRDRAIICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLGRLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|153956409|ref|YP_001397174.1| recombination protein RecR [Clostridium kluyveri DSM 555]
gi|219856721|ref|YP_002473843.1| hypothetical protein CKR_3378 [Clostridium kluyveri NBRC 12016]
gi|189029357|sp|A5N3V7|RECR_CLOK5 RecName: Full=Recombination protein recR
gi|254790762|sp|B9DXI6|RECR_CLOK1 RecName: Full=Recombination protein recR
gi|146349267|gb|EDK35803.1| RecR [Clostridium kluyveri DSM 555]
gi|219570445|dbj|BAH08429.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 198
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 81/198 (40%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TLH++ + A+A+ + CSIC
Sbjct: 2 DFYPVAIEKLIEEFAKLPGIGRKTAQRLTLHVLNLPADEVREFAKALVKARGTIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPCAIC + RD S+I V+E+ D+ ++ER K N +YHVL G++SP+ GPE
Sbjct: 62 GNFTDSDPCAICSNPNRDKSIICVIEEPKDIMSMERIKEYNGVYHVLHGNISPMAGRGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G L
Sbjct: 122 DIKLRELIRRI-NGDVNEVIVATNPNVEGEATAMYISKILKHLGVKVTRIAHGIPVGGNL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ RT +
Sbjct: 181 EYADEVTLLKALEGRTEI 198
>gi|186684245|ref|YP_001867441.1| recombination protein RecR [Nostoc punctiforme PCC 73102]
gi|186466697|gb|ACC82498.1| recombination protein RecR [Nostoc punctiforme PCC 73102]
Length = 247
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP+SA+R LH++K+ E + LA+A+ ++ LCS+C
Sbjct: 51 VYARPLARLIEQLQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIEAKKQIGLCSVCF 110
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + RD + I VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 111 HLSAEPVCEICRNANRDNNTICVVADPRDVIALEKTREYKGKYHVLGGVISPIDGIGPEQ 170
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L R+ +K +E+I AIS ++EG+TT YI LK K+TR+A+G+P+G +L+
Sbjct: 171 LNILALQRRVNQQKPQEVILAISPSVEGETTTLYIGQLLKPF-TKVTRIAFGLPVGGDLE 229
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 230 YADEVTLARALEGRREL 246
>gi|67921773|ref|ZP_00515290.1| RecR protein [Crocosphaera watsonii WH 8501]
gi|67856365|gb|EAM51607.1| RecR protein [Crocosphaera watsonii WH 8501]
Length = 202
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 127/202 (62%), Gaps = 2/202 (0%)
Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M+K I + LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V L
Sbjct: 1 MEKSLIYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGL 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C +C + C IC + RD+ I VV D D+ ALE+++ YHVLGG +SP+D
Sbjct: 61 CKVCFHFSEQPICDICRNPNRDSQTICVVADARDVIALEKTREYRGKYHVLGGVMSPMDG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGPE + IQ L+ R+ + ++E+I AIS T+EG+TT+ YI LK K+TR+A+G+PM
Sbjct: 121 IGPEQLYIQPLVRRVTQEGVKEVILAISPTVEGETTSLYIGQLLKPF-TKVTRIAFGLPM 179
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L+Y D+ T+ A+ R L
Sbjct: 180 GGDLEYADEVTLARALEGRQEL 201
>gi|323487367|ref|ZP_08092666.1| hypothetical protein HMPREF9474_04417 [Clostridium symbiosum
WAL-14163]
gi|323694198|ref|ZP_08108374.1| recombination protein RecR [Clostridium symbiosum WAL-14673]
gi|323399328|gb|EGA91727.1| hypothetical protein HMPREF9474_04417 [Clostridium symbiosum
WAL-14163]
gi|323501671|gb|EGB17557.1| recombination protein RecR [Clostridium symbiosum WAL-14673]
Length = 199
Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G +SA+R H++ + + L+ AM + + V CS C
Sbjct: 2 DYYSNQITKLIEELSKLPGIGSKSAQRLAFHIINMPSEQVERLSSAMVDAKHNVRYCSEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +RD I+VVE+ DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 FTLTDKELCPICSSDRRDHGTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R++ ++E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIRLKELMTRLQKDDVKEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 182 EYIDEVTLLRALDGRTEL 199
>gi|239830867|ref|ZP_04679196.1| recombination protein RecR [Ochrobactrum intermedium LMG 3301]
gi|239823134|gb|EEQ94702.1| recombination protein RecR [Ochrobactrum intermedium LMG 3301]
Length = 232
Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 160/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 92 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ +IRE+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 152 GPDDLNIKGLVERVAAGEIREVILAVNATVEGQTTAHYITDQLSSFDVRVTRLAHGVPVG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 212 GELDYLDEGTLAAALRARTTL 232
>gi|313902765|ref|ZP_07836162.1| DNA replication and repair protein RecR [Thermaerobacter
subterraneus DSM 13965]
gi|313466885|gb|EFR62402.1| DNA replication and repair protein RecR [Thermaerobacter
subterraneus DSM 13965]
Length = 199
Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 119/196 (60%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
LI L ++PG GP++A+R HL+ + ++ + LAEAM V CS+C N+
Sbjct: 4 APAFARLIAELEKLPGIGPKTAQRLAYHLLFRPQEEVRALAEAMVQARASVRYCSVCANL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC +C D RD VI VVE D+ A+ER++ YHVL G +SP+D +GPE +
Sbjct: 64 TDRDPCPVCRDPGRDPRVICVVEQPRDVVAMERTREFRGRYHVLHGVISPMDGVGPEQLR 123
Query: 127 IQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R+ + + E+I A + T+EG+ TA Y+ +K + +++TR+A G+P G +L+Y
Sbjct: 124 VRELLARLRQDPPVEEVILATNPTVEGEATALYLARLIKPLGIRVTRIARGVPEGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A++ R L
Sbjct: 184 VDELTLTRALQGRQAL 199
>gi|184199928|ref|YP_001854135.1| recombination protein RecR [Kocuria rhizophila DC2201]
gi|183580158|dbj|BAG28629.1| recombination protein RecR [Kocuria rhizophila DC2201]
Length = 201
Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 126/196 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + + L +A++ + V C ICG
Sbjct: 1 MYEGPVQDLIDELGRLPGVGPKSAQRIAFHLLDADKDEVQQLVDAISTVKTSVSFCVICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + CAIC D +RD SVI VVE+ D+ A+ER+++ LYHVLGG++SPL +GP+
Sbjct: 61 NVTEQEECAICRDARRDRSVICVVEESKDVMAIERTRSYRGLYHVLGGAISPLQGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ++E++ A +EG+ TA Y+ LK + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELMTRLSDETVQEIVLATDPNLEGEATATYLSRLLKTLGIRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A RTV
Sbjct: 181 YADEVTLGRAFEGRTV 196
>gi|269217438|ref|ZP_06161292.1| recombination protein RecR [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269213164|gb|EEZ79504.1| recombination protein RecR [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 298
Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 119/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ LI L R+PG GP+SA+R H++ + + + LA A+ + KV C ICGNV
Sbjct: 8 AVQELIDELGRLPGVGPKSAQRIAFHVLAEDPEEVKALASALLRVKEKVRFCEICGNVTE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C+IC D +R SVI VVE+ D+ A+ER++ YHVLGGS++P+ +GP+D+ I+
Sbjct: 68 AEVCSICTDPRRMDSVICVVEESKDIVAIERTREYRGRYHVLGGSINPIQGVGPDDLRIR 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R+ + E+I A IEG+ TA Y++ L I V ++RLA G+P+G +L+Y D+
Sbjct: 128 ELISRLSDGAVAEVIIATDPNIEGEATAAYLIRILSSIGVAVSRLASGLPVGGDLEYADE 187
Query: 189 GTIFEAIRSRTVL 201
T+ A R +
Sbjct: 188 ITLSRAFEGRQRI 200
>gi|302553016|ref|ZP_07305358.1| recombination protein RecR [Streptomyces viridochromogenes DSM
40736]
gi|302470634|gb|EFL33727.1| recombination protein RecR [Streptomyces viridochromogenes DSM
40736]
Length = 199
Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C+ CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D
Sbjct: 61 NVAQEELCNICRDTRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|134297923|ref|YP_001111419.1| recombination protein RecR [Desulfotomaculum reducens MI-1]
gi|172044204|sp|A4J0J1|RECR_DESRM RecName: Full=Recombination protein recR
gi|134050623|gb|ABO48594.1| DNA replication and repair protein RecR [Desulfotomaculum reducens
MI-1]
Length = 200
Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ L+ A++PG GP++A+R H++ +L LA+A+ + + CS+C
Sbjct: 3 YYSGPVARLVDEFAKLPGIGPKTAQRLAFHVLNSPPELAQGLAKALVEVRQSIKRCSLCC 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC D R+++++ VVE+ D+ A+E+++ YHVL G++SP++ I PED
Sbjct: 63 NLTDEDPCSICQDTTRNSNLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R++ I+E+I A ++ +EG+TTA Y+ LK + VK+TR+A+GIP+GS+L+
Sbjct: 123 LTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +A+ R
Sbjct: 183 YADAMTLNKALEGRGEF 199
>gi|255527110|ref|ZP_05393998.1| recombination protein RecR [Clostridium carboxidivorans P7]
gi|296187899|ref|ZP_06856292.1| recombination protein RecR [Clostridium carboxidivorans P7]
gi|255509212|gb|EET85564.1| recombination protein RecR [Clostridium carboxidivorans P7]
gi|296047520|gb|EFG86961.1| recombination protein RecR [Clostridium carboxidivorans P7]
Length = 198
Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R T+H++ + + AEA+ + CSIC
Sbjct: 2 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTIHVLNLPGEEVKEFAEALIKARGTIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPCA+C + RD S I VVE D+ A+E+ K N +YHVL G++SP+ GPE
Sbjct: 62 GNFTDSDPCAVCSNPNRDKSTICVVEQPKDIIAIEKVKEFNGVYHVLHGNISPMAGRGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI +++E+I A + IEG+ TA YI LK ++VK+TR+A+GIP+G +L
Sbjct: 122 DIKLKELIRRI-NGEVKEVIVATNPNIEGEATAMYISKVLKPLEVKVTRIAHGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +AI R +
Sbjct: 181 EYADEVTLAKAIEGRKEI 198
>gi|154495882|ref|ZP_02034578.1| hypothetical protein BACCAP_00162 [Bacteroides capillosus ATCC
29799]
gi|150275080|gb|EDN02128.1| hypothetical protein BACCAP_00162 [Bacteroides capillosus ATCC
29799]
Length = 200
Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ +E L++ ++PG G +SA+R +++ ++ A+A+ + + C +C
Sbjct: 2 QYFPPALEKLVEQFHKLPGIGHKSAQRLAFYMLSLPDEDAAAFAQAITDAKRAISFCPVC 61
Query: 64 GNVDTTD-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
N+ + PCAIC +RD S + VV D D+ +ERS+ N LYHVL G +SP++ +GP
Sbjct: 62 QNLTEGEGPCAICQSPKRDRSTVCVVADPKDVITMERSREYNGLYHVLHGVISPMNHVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+D+ I+SL+ER+ +++E+I A + EG+ TA Y+ LK VK+TRLAYGIP+GS
Sbjct: 122 DDLHIKSLVERVGSGEVKEVIMATNPDTEGEATAMYLSRLLKPFQVKVTRLAYGIPVGSH 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L++ DD T+ A+ R +
Sbjct: 182 LEFADDATLMRALEGRREM 200
>gi|302520196|ref|ZP_07272538.1| recombination protein RecR [Streptomyces sp. SPB78]
gi|318061709|ref|ZP_07980430.1| recombination protein RecR [Streptomyces sp. SA3_actG]
gi|318078458|ref|ZP_07985790.1| recombination protein RecR [Streptomyces sp. SA3_actF]
gi|302429091|gb|EFL00907.1| recombination protein RecR [Streptomyces sp. SPB78]
Length = 199
Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEEHCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|302535333|ref|ZP_07287675.1| recombination protein RecR [Streptomyces sp. C]
gi|302444228|gb|EFL16044.1| recombination protein RecR [Streptomyces sp. C]
Length = 199
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEELCGICRDPRRDTAVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGAVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|150019757|ref|YP_001312011.1| recombination protein RecR [Clostridium beijerinckii NCIMB 8052]
gi|149906222|gb|ABR37055.1| recombination protein RecR [Clostridium beijerinckii NCIMB 8052]
Length = 199
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++P G ++A+R TLH++ + + A+A+ V CS+C
Sbjct: 3 EFYPVAIEKLIEEFAKLPSIGQKTAQRLTLHILNLPDDEVKEFADALVKAKGTVKYCSVC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPCA+C + RD I VVE D+ +E+ K N +YHVL G++SP+ GP+
Sbjct: 63 GNFTDKDPCALCGNPNRDKGTICVVEQPKDIMTMEKVKEYNGVYHVLHGNISPMQGRGPQ 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ + ++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L
Sbjct: 123 DIRIRELVSRM-NEDVKEVILATNPNIEGEATAMYISKILKPLDVKVTRIASGIPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
DY D+ T+ +A+ R +
Sbjct: 182 DYADEVTLSKALEGRKEI 199
>gi|116669120|ref|YP_830053.1| recombination protein RecR [Arthrobacter sp. FB24]
gi|172044057|sp|A0JSD3|RECR_ARTS2 RecName: Full=Recombination protein recR
gi|116609229|gb|ABK01953.1| DNA replication and repair protein RecR [Arthrobacter sp. FB24]
Length = 199
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 121/195 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ Q + L EA+ + +V C++CG
Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKERVKFCTVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD S+I VVE+ D+ A+ER+++ YHVLGG+++P+ +GPE
Sbjct: 61 NVTEQELCNICRDPRRDPSIICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGVGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+
Sbjct: 121 LRIRELLTRLNDGAIQEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRR 195
>gi|303239745|ref|ZP_07326269.1| recombination protein RecR [Acetivibrio cellulolyticus CD2]
gi|302592682|gb|EFL62406.1| recombination protein RecR [Acetivibrio cellulolyticus CD2]
Length = 199
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI+ ++PG G ++A+R H++ + + LA ++++ K CS+CG
Sbjct: 3 VYAAPVARLIEEFEKLPGIGHKTAQRLAFHVLNMPIEKVERLASSISDAKLKTKYCSVCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ ++ C++C RD SVI VVED D+ A+ER K LYHVL G++SP++ IGPED
Sbjct: 63 NLTDSEICSLCSSNTRDESVICVVEDARDVAAMERIKEFKGLYHVLHGAISPMEGIGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L+ RI+ K I+E+I A + IEG+ TA YI LK I +K TR+A+GIP+G +L+
Sbjct: 123 IKIKELLLRIQDKDIKEVIIATNPNIEGEATAMYISKLLKPIGIKATRIAHGIPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R +
Sbjct: 183 YADEVTLAKALEGRREI 199
>gi|183602339|ref|ZP_02963706.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682697|ref|YP_002469080.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190273|ref|YP_002967667.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195679|ref|YP_002969234.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|254790752|sp|B8DVK3|RECR_BIFA0 RecName: Full=Recombination protein recR
gi|183218553|gb|EDT89197.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620347|gb|ACL28504.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248665|gb|ACS45605.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250233|gb|ACS47172.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289177990|gb|ADC85236.1| RecR [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793260|gb|ADG32795.1| recombination protein recR [Bifidobacterium animalis subsp. lactis
V9]
Length = 200
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +L++ + L +A+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDSFASLPGIGPKGAQRIAFYLLQAPDAESQRLVDAINEVKEKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGNV + PC IC D +RD I VVE+ D+ ++ER++ LY VLGG+++P+ +
Sbjct: 60 EVCGNVCESSPCTICSDPRRDHGTICVVEEPKDVMSIERTREYRGLYQVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L+ R+ +++E+I A++ IEG+ T Y+ L +D+K+TRLA G+P+G
Sbjct: 120 GPSDLNIAQLLNRLHDGEVKEIIVALNPNIEGEATTTYLSRLLAPLDIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A+ R
Sbjct: 180 GDLEYADEITLSRALEGRRE 199
>gi|239929913|ref|ZP_04686866.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672]
gi|291438248|ref|ZP_06577638.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672]
gi|291341143|gb|EFE68099.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672]
Length = 199
Score = 306 bits (786), Expect = 8e-82, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALMEVKAKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C+IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D
Sbjct: 61 NVAQEEQCSICRDARRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|295837978|ref|ZP_06824911.1| recombination protein RecR [Streptomyces sp. SPB74]
gi|197699471|gb|EDY46404.1| recombination protein RecR [Streptomyces sp. SPB74]
Length = 199
Score = 306 bits (786), Expect = 8e-82, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEERCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|239943047|ref|ZP_04694984.1| recombination protein RecR [Streptomyces roseosporus NRRL 15998]
gi|239989505|ref|ZP_04710169.1| recombination protein RecR [Streptomyces roseosporus NRRL 11379]
gi|291446523|ref|ZP_06585913.1| recombination protein recR [Streptomyces roseosporus NRRL 15998]
gi|291349470|gb|EFE76374.1| recombination protein recR [Streptomyces roseosporus NRRL 15998]
Length = 199
Score = 306 bits (786), Expect = 9e-82, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C +CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQQERCGICRDARRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGSITELILATDPNLEGEATATYLARMVKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|297563730|ref|YP_003682704.1| recombination protein RecR [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848178|gb|ADH70198.1| recombination protein RecR [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 199
Score = 306 bits (786), Expect = 9e-82, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R HL+ + + L A+ + KV CS+CG
Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHLLSAEHADVKRLVSALVEVKEKVRFCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV D C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEEDQCRICRDVRRDPAIICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIKELMTRLADGQVTELILATDPNLEGEATATYLARLVKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R L
Sbjct: 181 YADEVTLGRAFEGRRSL 197
>gi|13474593|ref|NP_106162.1| recombination protein RecR [Mesorhizobium loti MAFF303099]
gi|20139628|sp|Q98BM4|RECR_RHILO RecName: Full=Recombination protein recR
gi|14025347|dbj|BAB51948.1| recombination protein; RecR [Mesorhizobium loti MAFF303099]
Length = 201
Score = 306 bits (786), Expect = 9e-82, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 164/201 (81%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AM+ +KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMSEAADKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC IC D +RDA IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD I
Sbjct: 61 STCGNVDTADPCMICTDPRRDAGTIIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + I+SLI+R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G
Sbjct: 121 GPDQLNIRSLIDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTAF 201
>gi|254385607|ref|ZP_05000932.1| recombination protein recR [Streptomyces sp. Mg1]
gi|194344477|gb|EDX25443.1| recombination protein recR [Streptomyces sp. Mg1]
Length = 199
Score = 306 bits (786), Expect = 9e-82, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEERCTICRDPRRDTTVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGVVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|148378040|ref|YP_001252581.1| recombination protein recR [Clostridium botulinum A str. ATCC 3502]
gi|153932718|ref|YP_001382439.1| recombination protein RecR [Clostridium botulinum A str. ATCC
19397]
gi|153937733|ref|YP_001385992.1| recombination protein RecR [Clostridium botulinum A str. Hall]
gi|153938661|ref|YP_001389395.1| recombination protein RecR [Clostridium botulinum F str. Langeland]
gi|168181145|ref|ZP_02615809.1| recombination protein recR [Clostridium botulinum NCTC 2916]
gi|170756536|ref|YP_001779656.1| recombination protein RecR [Clostridium botulinum B1 str. Okra]
gi|170758489|ref|YP_001785359.1| recombination protein RecR [Clostridium botulinum A3 str. Loch
Maree]
gi|226947246|ref|YP_002802337.1| recombination protein RecR [Clostridium botulinum A2 str. Kyoto]
gi|237793344|ref|YP_002860896.1| recombination protein RecR [Clostridium botulinum Ba4 str. 657]
gi|166221932|sp|A7FQ67|RECR_CLOB1 RecName: Full=Recombination protein recR
gi|166221933|sp|A5HXS8|RECR_CLOBH RecName: Full=Recombination protein recR
gi|166221934|sp|A7G9D5|RECR_CLOBL RecName: Full=Recombination protein recR
gi|229890145|sp|B1IDW8|RECR_CLOBK RecName: Full=Recombination protein recR
gi|229890146|sp|B1KRT7|RECR_CLOBM RecName: Full=Recombination protein recR
gi|254790760|sp|C1FPJ6|RECR_CLOBJ RecName: Full=Recombination protein recR
gi|259563688|sp|C3KXT0|RECR_CLOB6 RecName: Full=Recombination protein recR
gi|148287524|emb|CAL81586.1| recombination protein [Clostridium botulinum A str. ATCC 3502]
gi|152928762|gb|ABS34262.1| recombination protein RecR [Clostridium botulinum A str. ATCC
19397]
gi|152933647|gb|ABS39146.1| recombination protein RecR [Clostridium botulinum A str. Hall]
gi|152934557|gb|ABS40055.1| recombination protein RecR [Clostridium botulinum F str. Langeland]
gi|169121748|gb|ACA45584.1| recombination protein RecR [Clostridium botulinum B1 str. Okra]
gi|169405478|gb|ACA53889.1| recombination protein RecR [Clostridium botulinum A3 str. Loch
Maree]
gi|182668013|gb|EDT79992.1| recombination protein recR [Clostridium botulinum NCTC 2916]
gi|226843381|gb|ACO86047.1| recombination protein RecR [Clostridium botulinum A2 str. Kyoto]
gi|229261177|gb|ACQ52210.1| recombination protein RecR [Clostridium botulinum Ba4 str. 657]
gi|295317503|gb|ADF97880.1| recombination protein RecR [Clostridium botulinum F str. 230613]
Length = 198
Score = 306 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+C
Sbjct: 2 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GPE
Sbjct: 62 GNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 122 DIKLKELIRRI-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 181 EYADEVTLAKALEGRIEL 198
>gi|83588903|ref|YP_428912.1| DNA replication and repair protein RecR [Moorella thermoacetica
ATCC 39073]
gi|123525295|sp|Q2RMH0|RECR_MOOTA RecName: Full=Recombination protein recR
gi|83571817|gb|ABC18369.1| DNA replication and repair protein RecR [Moorella thermoacetica
ATCC 39073]
Length = 199
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 83/197 (42%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI L R+PG GP++A+R HL+K LA A+ K CSICG
Sbjct: 2 YYPEPLNKLITALGRLPGIGPKTAQRLAFHLLKVPASEARDLAAAILEARQKTIYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DPC +C D +RD S I VVE+ D+ ALE+++ LYHVL G++SP+D IGPE
Sbjct: 62 NFTDRDPCRLCSDPERDHSCICVVEEARDIIALEKTRQYRGLYHVLQGAISPVDGIGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ K++E+I A +A +EG++TA Y+ LK + VK+TRLAYG+P+G +L+
Sbjct: 122 LRVKELLARLHDGKVKEVILATNADVEGESTALYLDKLLKTLGVKVTRLAYGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R L
Sbjct: 182 YADEVTLARAFAGRHEL 198
>gi|291548742|emb|CBL25004.1| recombination protein RecR [Ruminococcus torques L2-14]
Length = 198
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ +R+PG G +SA+R H++ + + LA A+ + V C C
Sbjct: 2 DYYSNQISRLIEEFSRLPGIGNKSAQRLAFHVINMPVEQVEGLANAIVDARKNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDKDICPICSNPDRDHKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA YI +K + +K++R+A G+P+G +L
Sbjct: 122 DIRLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPVGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|225575491|ref|ZP_03784101.1| hypothetical protein RUMHYD_03581 [Blautia hydrogenotrophica DSM
10507]
gi|225037288|gb|EEG47534.1| hypothetical protein RUMHYD_03581 [Blautia hydrogenotrophica DSM
10507]
Length = 201
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M I LI+ L+ +PG G +SA+R H++ + L +A+ + V C
Sbjct: 1 MGVDYYSSYISRLIEQLSSLPGIGNKSAQRLAFHIMNMPGDQVEQLVQAIHDAKEHVQYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + + C IC + +RD S I+VVE+ DL A E++ +YHVL G++SP+ I
Sbjct: 61 KCCYTLTDKELCPICGNPKRDHSTIMVVENTRDLAAYEKTGKFEGVYHVLHGAISPMLGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+DI ++ L++R++ ++++E+I A ++++EG+TTA YI +K +K++R+A G+P+G
Sbjct: 121 GPDDIKLKELMQRLQSEEVKEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y+D+ T+ A+ R L
Sbjct: 181 GDLEYIDEVTLLRALEGRVEL 201
>gi|297582362|ref|YP_003698142.1| recombination protein RecR [Bacillus selenitireducens MLS10]
gi|297140819|gb|ADH97576.1| recombination protein RecR [Bacillus selenitireducens MLS10]
Length = 198
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ ++PG GP++A R +++ E + A+A+ N ++ CS+C +
Sbjct: 3 YPQPVTKLIEGFMKLPGIGPKTAARLAFYVLDMNEDDVLDFAKALVNAKRELTYCSVCHH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC DQ RD S+I VV+D D+ A+E+ + +YHVL G++SP+D IGPEDI
Sbjct: 63 ITDTDPCRICDDQSRDRSIICVVQDAKDVIAMEKMREYTGMYHVLHGAISPVDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + ++ELI A + IEG+ TA YI +K +K+TR+A+G+P+G +L+Y
Sbjct: 123 FIPDLLKRLQDETVQELIIATNPNIEGEATAMYISRLVKPTGMKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI R L
Sbjct: 183 ADEMTLSRAIEGRREL 198
>gi|218246033|ref|YP_002371404.1| recombination protein RecR [Cyanothece sp. PCC 8801]
gi|254790764|sp|B7K2B2|RECR_CYAP8 RecName: Full=Recombination protein recR
gi|218166511|gb|ACK65248.1| recombination protein RecR [Cyanothece sp. PCC 8801]
Length = 197
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI+ L R+PG GP++A+R LH++K+ E + LA A+ KV LC++C
Sbjct: 1 MYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPENEIQALASALIEAKKKVGLCNVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + RD I VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 61 HFSADPICEICRNPNRDKQTICVVADSRDVIALEKTREYKGRYHVLGGVMSPMDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQ L+ R+ ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+
Sbjct: 121 LYIQPLVRRVTQDGVKEVILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLE 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 180 YADEVTLARALEGRREL 196
>gi|172037739|ref|YP_001804240.1| recombination protein RecR [Cyanothece sp. ATCC 51142]
gi|171699193|gb|ACB52174.1| recombination protein [Cyanothece sp. ATCC 51142]
Length = 202
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M+K I + LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V L
Sbjct: 1 MEKSPIYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGL 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C +C + C IC + RD+ + VV D D+ ALE+++ YHVLGG +SP+D
Sbjct: 61 CKVCFHFSEQPVCDICRNPNRDSQTVCVVADSRDVIALEKTREYRGKYHVLGGVMSPMDG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGPE + IQ L+ R+ + ++E+I AIS T+EG+TT YI LK K+TR+A+G+PM
Sbjct: 121 IGPEQLYIQPLVRRVTQEGVKEIILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPM 179
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L+Y D+ T+ A+ R L
Sbjct: 180 GGDLEYADEVTLARALEGRREL 201
>gi|333026055|ref|ZP_08454119.1| putative recombination protein RecR [Streptomyces sp. Tu6071]
gi|332745907|gb|EGJ76348.1| putative recombination protein RecR [Streptomyces sp. Tu6071]
Length = 195
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV
Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCGNVAQE 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 62 EHCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 122 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 181
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 182 TLGRAFEGRRLL 193
>gi|72160448|ref|YP_288105.1| recombination protein RecR [Thermobifida fusca YX]
gi|123747302|sp|Q47TY2|RECR_THEFY RecName: Full=Recombination protein recR
gi|71914180|gb|AAZ54082.1| DNA replication and repair protein RecR [Thermobifida fusca YX]
Length = 199
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R HL+ + + L A+ + +V C++CG
Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHLLAAETADVHRLVNALVAVKERVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NIAEETQCRICRDPRRDDTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ ++ E+I A +EG+ TA Y+ LK + +K+TRLA G+P+G +L+
Sbjct: 121 LRVKELMARLSEGRVTEVILATDPNLEGEATATYLARLLKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R L
Sbjct: 181 YADEVTLGRAFEGRRAL 197
>gi|302872972|ref|YP_003841605.1| recombination protein RecR [Clostridium cellulovorans 743B]
gi|307686513|ref|ZP_07628959.1| recombination protein RecR [Clostridium cellulovorans 743B]
gi|302575829|gb|ADL49841.1| recombination protein RecR [Clostridium cellulovorans 743B]
Length = 198
Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats.
Identities = 80/198 (40%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++PG G ++A+R TLH++ ++ + AEA+ + CSIC
Sbjct: 2 EFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPKEEVSEFAEALVKARGTIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TDPC+IC + R+ S+I VVE+ D+ A+E+ + N YHVL G++SP+ GP
Sbjct: 62 GNYTDTDPCSICSNPNRENSIICVVEEPKDIMAVEKVRDFNGTYHVLHGTISPMAGRGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R++ I+E+I A +A +EG+ TA YI LK DVK+TR+A+G+PMG +L
Sbjct: 122 DINLKQLVSRMKDN-IKEIIVATNANVEGEATAMYISKILKPFDVKVTRIAHGLPMGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEITLAKALEGRKEI 198
>gi|182418718|ref|ZP_02949991.1| recombination protein RecR [Clostridium butyricum 5521]
gi|237669751|ref|ZP_04529728.1| recombination protein RecR [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377412|gb|EDT74968.1| recombination protein RecR [Clostridium butyricum 5521]
gi|237654825|gb|EEP52388.1| recombination protein RecR [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 198
Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++P G ++A+R TLH++ E + A A+ + CSIC
Sbjct: 2 EFYPVAIEKLIEEFAKLPSIGKKTAQRLTLHVLNLPEDEVREFANALVKARGTIKYCSIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN +DPC++C + RD +I VVE D+ +E+ K N +YHVL G++SP+ GP+
Sbjct: 62 GNFTDSDPCSLCSNPNRDKGMICVVEQPKDIMTMEKVKEYNGVYHVLHGNISPMQGRGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ ++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L
Sbjct: 122 DIRIRELVARMSA-DVKEVILATNPNIEGEATAMYISKVLKPLDVKVTRIAAGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLSKALEGRKEI 198
>gi|260905314|ref|ZP_05913636.1| recombination protein RecR [Brevibacterium linens BL2]
Length = 201
Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 123/199 (61%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ +++L++ ++PG GP+SA+R H+++ + + LA+A+ + +V C I
Sbjct: 2 SAVYEGALQDLVEEFGKLPGIGPKSAQRLAFHILQSESADVSSLAQALTEVKKRVRFCDI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGNV C +C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++ P+ +GP
Sbjct: 62 CGNVSEEAECTVCQDPRRDRSMICVVEEPKDVVAIERTREYRGLYHVLGGAIDPMAGVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+++ I+ L+ R++ +++E + A +EG+ TA Y++ L + V +TRLA G+P+G +
Sbjct: 122 DNLRIKELMPRLQNGEVKECVIATDPNLEGEATATYLVRLLNSLGVTVTRLASGLPVGGD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A R +
Sbjct: 182 LEYADEVTLGRAFSGRREM 200
>gi|260462015|ref|ZP_05810260.1| recombination protein RecR [Mesorhizobium opportunistum WSM2075]
gi|259032262|gb|EEW33528.1| recombination protein RecR [Mesorhizobium opportunistum WSM2075]
Length = 201
Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AM +KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMGEAADKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D +RDA+ +IVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 STCGNVDTSDPCMICTDPRRDATTLIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + I+SLI+R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G
Sbjct: 121 GPDQLNIRSLIDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTAF 201
>gi|325962020|ref|YP_004239926.1| DNA replication and repair protein RecR [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468107|gb|ADX71792.1| DNA replication and repair protein RecR [Arthrobacter
phenanthrenivorans Sphe3]
Length = 199
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 121/195 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ Q + L EA+ + +V C++CG
Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKERVKFCTVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE
Sbjct: 61 NVTEQELCNICRDPRRDPAVICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+
Sbjct: 121 LRIRELLTRLNDGAIQEVIIATDPNLEGEATATYLARMLKTIGITVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRR 195
>gi|320009950|gb|ADW04800.1| recombination protein RecR [Streptomyces flavogriseus ATCC 33331]
Length = 199
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C ICG
Sbjct: 1 MYEGVVQELIDELGRLPGVGPKSAQRIAFHVLQAEPTDVRRLAHALLEVKDKVRFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQQEQCGICRDARRDRSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGSITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|312142721|ref|YP_003994167.1| recombination protein RecR [Halanaerobium sp. 'sapolanicus']
gi|311903372|gb|ADQ13813.1| recombination protein RecR [Halanaerobium sp. 'sapolanicus']
Length = 199
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI L+++PG GP++ARR + +++ + + + L++A+ +K+ CS C +
Sbjct: 4 YPRPMGKLIGELSKLPGIGPKTARRLSFYILGQSKNEVKTLSDALIEARDKINYCSRCNH 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C+ C +RD S+I VVE D+ A+E++ N LYHVL G++SP+D IGP+ I
Sbjct: 64 LTEGDICSFCSSDERDLSIICVVESPRDVVAMEKTGEYNGLYHVLHGAISPMDGIGPDQI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ R+E ++ E+I A EG TA Y+ +K + VK+TR+A+GIP+G +L+Y
Sbjct: 124 KIRSLMPRLEKGEVEEIIIATDPNAEGDATAMYLAKLIKPLGVKVTRIAHGIPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 184 ADEVTLSKALEGRREI 199
>gi|257059083|ref|YP_003136971.1| recombination protein RecR [Cyanothece sp. PCC 8802]
gi|256589249|gb|ACV00136.1| recombination protein RecR [Cyanothece sp. PCC 8802]
Length = 197
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI+ L R+PG GP++A+R LH++K+ E + LA A+ KV LC++C
Sbjct: 1 MYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPENEIQALATALIEAKKKVGLCNVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + RD I VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 61 HFSADPICEICRNPNRDKQTICVVADSRDVIALEKTREYKGRYHVLGGVMSPMDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQ L+ R+ ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+
Sbjct: 121 LYIQPLVRRVTQDGVKEVILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLE 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 180 YADEVTLARALEGRREL 196
>gi|255658594|ref|ZP_05404003.1| recombination protein RecR [Mitsuokella multacida DSM 20544]
gi|260849401|gb|EEX69408.1| recombination protein RecR [Mitsuokella multacida DSM 20544]
Length = 198
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 118/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ NLI+ +PG G ++A R H++ LA A+ + K+ C+ C N+
Sbjct: 6 PLANLIEHFRALPGIGQKTAVRLAYHVLDMDPAQARALASAIIDAKEKIGYCNTCFNLSD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+PCAIC +RD SVI VVE D+ A+ER + +YHVL G+LSPL+ IGP DI I+
Sbjct: 66 QNPCAICASDERDHSVICVVEQPQDVAAMERMRDYQGVYHVLHGALSPLEGIGPSDIRIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ ++E+I A + +EG+ T YI LK + +K+TR+A+G+P+G +L+Y D+
Sbjct: 126 ELLGRLQDDTVKEVIMATNPNVEGEATTMYIAKLLKPLGIKVTRIAHGLPIGGDLEYADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ +R +
Sbjct: 186 VTLAKAMENRREI 198
>gi|254393634|ref|ZP_05008763.1| recombination protein recR [Streptomyces clavuligerus ATCC 27064]
gi|294813446|ref|ZP_06772089.1| Recombination protein recR [Streptomyces clavuligerus ATCC 27064]
gi|326441841|ref|ZP_08216575.1| recombination protein RecR [Streptomyces clavuligerus ATCC 27064]
gi|197707250|gb|EDY53062.1| recombination protein recR [Streptomyces clavuligerus ATCC 27064]
gi|294326045|gb|EFG07688.1| Recombination protein recR [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEEQCGICRDPRRDLAVICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|218289070|ref|ZP_03493307.1| recombination protein RecR [Alicyclobacillus acidocaldarius LAA1]
gi|218240895|gb|EED08073.1| recombination protein RecR [Alicyclobacillus acidocaldarius LAA1]
Length = 199
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + I+ ++PG GP++A R H+++ E + A+A+ ++ + C++C N
Sbjct: 4 YPEPVARAIEHFMKLPGVGPKTAARLAFHVLEMSEADVRAFAKALIDLKTGLTECAVCCN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ PCAIC D +RD VI VV++ D+ A+ER++ + LYHVL G++SP++ +GP+DI
Sbjct: 64 ITEASPCAICRDPRRDQRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGPQDI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ +I E+I A + +EG+ TA YI LK VK+TR+A+G+P+G +L+Y
Sbjct: 124 RIRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQVKLTRIAHGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 184 ADEVTLAKALEGRRAL 199
>gi|304437631|ref|ZP_07397585.1| recombination protein R [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369374|gb|EFM23045.1| recombination protein R [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 198
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ L +PG G ++A R H++ + LA A+ K+ CS+C N+
Sbjct: 6 PLAQLIEQLRTLPGIGAKTATRLAYHILDMDMERAHRLAAAITGAKEKIGFCSVCFNLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+DPCAIC+ ++RD + I VVE D+ A+ER + +YHVL G+LSPL+ +GP DI I+
Sbjct: 66 SDPCAICMAEKRDHTTICVVEQPQDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDIRIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R + ++E+I A + +EG+ TA YI LK + +++TR+A+G+P+G +L+Y D+
Sbjct: 126 ELVLRAGKENVQEVIVATNPNVEGEATAMYIAKLLKPMGIRVTRIAHGLPVGGDLEYADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 186 VTLSRAMENRREI 198
>gi|258510127|ref|YP_003183561.1| recombination protein RecR [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476853|gb|ACV57172.1| recombination protein RecR [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 199
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + I+ ++PG GP++A R H+++ E + A+A+ ++ + C++C N
Sbjct: 4 YPEPVARAIEHFMKLPGVGPKTAARLAFHVLEMSEADVKAFAKALIDLKTGLTECAVCCN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ PCAIC D +RD VI VV++ D+ A+ER++ + LYHVL G++SP++ +GP+DI
Sbjct: 64 ITEASPCAICRDPRRDRRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGPQDI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ +I E+I A + +EG+ TA YI LK VK+TR+A+G+P+G +L+Y
Sbjct: 124 RIRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQVKLTRIAHGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 184 ADEVTLAKALEGRRAL 199
>gi|126656915|ref|ZP_01728093.1| recombination protein RecR [Cyanothece sp. CCY0110]
gi|126621753|gb|EAZ92462.1| recombination protein RecR [Cyanothece sp. CCY0110]
Length = 202
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 127/202 (62%), Gaps = 2/202 (0%)
Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M+K I + LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V L
Sbjct: 1 MEKSPIYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGL 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C +C + C IC + RD+ + VV D D+ ALE+++ YHVLGG +SP+D
Sbjct: 61 CKVCFHFSEQPICDICRNPNRDSQTVCVVADSRDVIALEKTREYRGKYHVLGGVMSPMDG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGPE + IQ+L+ R+ + I+E+I AIS T+EG+TT YI LK K+TR+A+G+PM
Sbjct: 121 IGPEQLYIQALVRRVTQEGIKEIILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPM 179
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L+Y D+ T+ A+ R L
Sbjct: 180 GGDLEYADEVTLARALEGRREL 201
>gi|282863698|ref|ZP_06272756.1| recombination protein RecR [Streptomyces sp. ACTE]
gi|282561399|gb|EFB66943.1| recombination protein RecR [Streptomyces sp. ACTE]
Length = 199
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C +CG
Sbjct: 1 MYEGVVQELIDELGRLPGVGPKSAQRIAFHVLQAEPTDVRRLAHALLEVKDKVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + CAIC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQQEQCAICRDARRDRTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|322804302|emb|CBZ01852.1| recombination protein RecR [Clostridium botulinum H04402 065]
Length = 198
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+C
Sbjct: 2 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALIKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GPE
Sbjct: 62 GNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 122 DIKLRELIRRI-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 181 EYADEVTLAKALEGRIEL 198
>gi|326329508|ref|ZP_08195831.1| recombination protein RecR [Nocardioidaceae bacterium Broad-1]
gi|325952675|gb|EGD44692.1| recombination protein RecR [Nocardioidaceae bacterium Broad-1]
Length = 198
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 120/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL++ + LA + + KV CS+C
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLQADPADVHRLASILNEVKAKVKFCSVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +R+ SV+ VVE+ D+ A+ER++ YHVLGG++SP+D IGP+
Sbjct: 61 NVSEEETCRICRDPRREQSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGIGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ I E+I A +EG+ TA Y+ +L + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELVQRLNDPGITEVILATDPNLEGEATATYLTRQLSPLGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFAGRRA 196
>gi|148560476|ref|YP_001258079.1| recombination protein RecR [Brucella ovis ATCC 25840]
gi|148371733|gb|ABQ61712.1| recombination protein RecR [Brucella ovis ATCC 25840]
Length = 232
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++R + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 92 SCCGNVDTSDPCTICTDERRAPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 152 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 212 GELDYLDEGTLAAALRARTTL 232
>gi|17988193|ref|NP_540827.1| recombination protein RecR [Brucella melitensis bv. 1 str. 16M]
gi|17983955|gb|AAL53091.1| recombination protein recr [Brucella melitensis bv. 1 str. 16M]
Length = 224
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 24 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 83
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 84 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 143
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 144 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 203
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 204 GELDYLDEGTLAAALRARTTL 224
>gi|187776531|ref|ZP_02993004.1| hypothetical protein CLOSPO_00036 [Clostridium sporogenes ATCC
15579]
gi|187775190|gb|EDU38992.1| hypothetical protein CLOSPO_00036 [Clostridium sporogenes ATCC
15579]
Length = 201
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+C
Sbjct: 5 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVC 64
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPCAIC + RD S+I V+E D+ ++E+ + N +YHVL G++SP+ GPE
Sbjct: 65 GNFTDKDPCAICGNPNRDKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPE 124
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI R+ + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 125 DIKLRELIRRV-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 183
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 184 EYADEVTLAKALEGRIEL 201
>gi|312793325|ref|YP_004026248.1| recombination protein recr [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877253|ref|ZP_07737221.1| recombination protein RecR [Caldicellulosiruptor lactoaceticus 6A]
gi|311795967|gb|EFR12328.1| recombination protein RecR [Caldicellulosiruptor lactoaceticus 6A]
gi|312180465|gb|ADQ40635.1| recombination protein RecR [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 199
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+K I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC
Sbjct: 1 MQQK--ENSISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C+IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 KVCCNFTEDEVCSICKDEKRDRSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +++E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLMKRLSDPQVKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 179 GDIEYADEVTILKAIEGRREI 199
>gi|197302303|ref|ZP_03167362.1| hypothetical protein RUMLAC_01030 [Ruminococcus lactaris ATCC
29176]
gi|197298734|gb|EDY33275.1| hypothetical protein RUMLAC_01030 [Ruminococcus lactaris ATCC
29176]
Length = 198
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ +R+PG G +SA+R H++ + LA A+ + V C C
Sbjct: 2 DYYSHQISRLIEEFSRLPGIGSKSAQRLAFHVINMPLDQVEGLANAIVDARKNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDQDVCPICSNPDRDKKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRLKELMQRL-QGDVDEVIIATNSSVEGETTAMYISKLIKPAGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALDGRTEL 198
>gi|168184983|ref|ZP_02619647.1| recombination protein RecR [Clostridium botulinum Bf]
gi|182671960|gb|EDT83921.1| recombination protein RecR [Clostridium botulinum Bf]
Length = 198
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+C
Sbjct: 2 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GPE
Sbjct: 62 GNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L
Sbjct: 122 DIKLKELIRRI-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPIGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R L
Sbjct: 181 EYADEVTLAKALEGRIEL 198
>gi|225181515|ref|ZP_03734957.1| recombination protein RecR [Dethiobacter alkaliphilus AHT 1]
gi|225167763|gb|EEG76572.1| recombination protein RecR [Dethiobacter alkaliphilus AHT 1]
Length = 198
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 77/195 (39%), Positives = 126/195 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + I LI+ L ++PG GP++A+R L L+ + +A +M + +K C ICG
Sbjct: 2 IYPEPISRLIESLQKLPGVGPKTAQRFALFLLSLPRDQVVAIARSMVDARDKTRYCRICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + C +C D++RD +VI VV+D D+ A+ER++ LYHVLGG++SP+D IGPE
Sbjct: 62 NFSDDETCTVCRDKRRDNTVICVVQDSRDVLAMERTREYKGLYHVLGGAISPMDGIGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ERI+ + RE+I A + +EG+ TA Y+ LK + +K+TR+A+G+P+G +L+
Sbjct: 122 LRMRELLERIKKGRAREVILATNPNVEGEATALYVARVLKPLGLKVTRIAHGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ A+ R
Sbjct: 182 YADEVTLSRALEGRR 196
>gi|314937926|ref|ZP_07845242.1| recombination protein RecR [Enterococcus faecium TX0133a04]
gi|314941417|ref|ZP_07848310.1| recombination protein RecR [Enterococcus faecium TX0133C]
gi|314948528|ref|ZP_07851908.1| recombination protein RecR [Enterococcus faecium TX0082]
gi|314951283|ref|ZP_07854337.1| recombination protein RecR [Enterococcus faecium TX0133A]
gi|314992886|ref|ZP_07858287.1| recombination protein RecR [Enterococcus faecium TX0133B]
gi|314998090|ref|ZP_07862978.1| recombination protein RecR [Enterococcus faecium TX0133a01]
gi|313587932|gb|EFR66777.1| recombination protein RecR [Enterococcus faecium TX0133a01]
gi|313592690|gb|EFR71535.1| recombination protein RecR [Enterococcus faecium TX0133B]
gi|313596500|gb|EFR75345.1| recombination protein RecR [Enterococcus faecium TX0133A]
gi|313599840|gb|EFR78683.1| recombination protein RecR [Enterococcus faecium TX0133C]
gi|313642784|gb|EFS07364.1| recombination protein RecR [Enterococcus faecium TX0133a04]
gi|313645025|gb|EFS09605.1| recombination protein RecR [Enterococcus faecium TX0082]
Length = 200
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + I LI ++PG G ++A R + + K++++ A+++ ++ + C
Sbjct: 1 MNMQY-PEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGN+ DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++
Sbjct: 60 SICGNITEEDPCEICRNPSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGT 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDI I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +G
Sbjct: 120 GPEDINISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S+++Y D+ T+ +A+ R L
Sbjct: 180 SDIEYADEVTLLKAVEGRREL 200
>gi|153007368|ref|YP_001368583.1| recombination protein RecR [Ochrobactrum anthropi ATCC 49188]
gi|166221949|sp|A6WUV0|RECR_OCHA4 RecName: Full=Recombination protein recR
gi|151559256|gb|ABS12754.1| recombination protein RecR [Ochrobactrum anthropi ATCC 49188]
Length = 201
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 160/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPTTLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ +I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVSTGEIKEVILAVNATVEGQTTAHYITDQLSSFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|187935036|ref|YP_001887619.1| recombination protein RecR [Clostridium botulinum B str. Eklund
17B]
gi|229890144|sp|B2TR53|RECR_CLOBB RecName: Full=Recombination protein recR
gi|187723189|gb|ACD24410.1| recombination protein RecR [Clostridium botulinum B str. Eklund
17B]
Length = 198
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE LI+ A++P G ++A+R LH++ + A A+ + CS C
Sbjct: 2 EFYPVAIEKLIEEFAKLPSIGKKTAQRLALHILNLPNDEVREFATALVKARGTIKYCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TDPCA+C + RD S I VVE D+ +E+ K N LYHVL G++SP+ GP+
Sbjct: 62 GNFTDTDPCALCSNPNRDKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ + +E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G +L
Sbjct: 122 DIKIRELVARMNEEA-KEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 181 EYADEVTLSKALEGRKEI 198
>gi|317131172|ref|YP_004090486.1| recombination protein RecR [Ethanoligenens harbinense YUAN-3]
gi|315469151|gb|ADU25755.1| recombination protein RecR [Ethanoligenens harbinense YUAN-3]
Length = 199
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ LI+ R+PG G ++A+R ++ + A+A+ + ++ C +C
Sbjct: 3 YYAAPLSRLIEQFERLPGIGRKTAQRLAFFVLDGTNEQAKAFAQAILDAKGQMHTCKVCQ 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC + RD + I VVED D+ A ER++ N LYHVL G +SP+D IGPE
Sbjct: 63 NLTDGEICTICGNPARDHTTICVVEDPRDVVAFERTRDYNGLYHVLHGVISPMDGIGPEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R ++E+I A + +EG+ TA YI ++ + VK+TR+AYGIP+G EL+
Sbjct: 123 LHIKELLARAADG-VQEIILATNPDVEGEATALYISRLIRPLGVKVTRIAYGIPVGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R+ L
Sbjct: 182 YADEITLSRALEGRSEL 198
>gi|309390264|gb|ADO78144.1| DNA replication and repair protein RecR [Halanaerobium praevalens
DSM 2228]
Length = 199
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 119/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI L+++PG GP++ARR + +++ + + + LA+A+ ++ CS C +
Sbjct: 4 YPKPMGKLIGELSKLPGIGPKTARRLSFYILGQPKTDVKNLADALLEAREQINYCSNCNH 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C + R+ I VVE D+ A+E++ LYHVL G++SP+D IGP++I
Sbjct: 64 LTEGETCTFCQSEARNRRTICVVESPRDVVAMEKTGEYKGLYHVLHGAISPMDGIGPDEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SLI R++ + E+I A EG TA Y+ +K + VK+TR+A+GIP+G +L+Y
Sbjct: 124 KIRSLIPRLKQDAVEEIIVATDPNAEGDATAMYLAKLIKPLGVKVTRIAHGIPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 184 ADEVTLSKALEGRREL 199
>gi|113208301|dbj|BAF03507.1| recombinant protein [Streptomyces albulus]
Length = 195
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV
Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLANALMEVKAKVRFCSVCGNVAQE 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C+D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 62 EQCRVCLDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+
Sbjct: 122 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 181
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 182 TLGRAFEGRRLL 193
>gi|16332099|ref|NP_442827.1| recombination protein RecR [Synechocystis sp. PCC 6803]
gi|3024523|sp|P74533|RECR_SYNY3 RecName: Full=Recombination protein recR
gi|1653728|dbj|BAA18639.1| recombination protein [Synechocystis sp. PCC 6803]
Length = 232
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + LI+ L R+P GP++A+R LHL+K+ + + LA+A+ + +V C +C
Sbjct: 37 IYTPPLARLIEQLQRLPSVGPKTAQRLALHLLKRPDAEVENLAQALLDAKKRVGQCQVCF 96
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC QRD SVI VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 97 HLSAEPVCDICRHPQRDNSVICVVSDPRDVIALEKTREFRGKYHVLGGVISPMDGIGPEQ 156
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQ L+ R+ +I+E+I AIS ++EG+TT Y+ L+ K+TR+A+G+PMG +L+
Sbjct: 157 LTIQPLLHRVSQPEIKEVILAISPSVEGETTTLYLGKLLQPF-TKVTRIAFGLPMGGDLE 215
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 216 YADEVTLARALEGRREL 232
>gi|182437170|ref|YP_001824889.1| recombination protein RecR [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777796|ref|ZP_08237061.1| Recombination protein recR [Streptomyces cf. griseus XylebKG-1]
gi|178465686|dbj|BAG20206.1| putative recombination and repair protein [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326658129|gb|EGE42975.1| Recombination protein recR [Streptomyces cf. griseus XylebKG-1]
Length = 199
Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA ++ + +KV C +CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHSLLEVKDKVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEEQCGICRDARRDRSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGSITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|297625599|ref|YP_003687362.1| Recombination protein recR [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921364|emb|CBL55917.1| Recombination protein recR [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 208
Score = 304 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 1/196 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R L+ + + + LA + + LCSIC
Sbjct: 1 MYDGPIQDLIDELGRLPGVGPKSAQRIAFWLLDQPQADVEQLANTLRTVKEGTHLCSICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV +D C IC D +RD S I VVE+ D+ A+ER++ LYHVLGGS+SP+D GP D
Sbjct: 61 NVTDSDICRICRDPRRDHSSICVVEESKDVMAIERTREFRGLYHVLGGSISPIDGRGPGD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSEL 183
+ I L+ R++ K+ E+I A +EG TA YI L + ++++RLA G+P+G +L
Sbjct: 121 LRIAELVRRLQDPKVSEIILATDPNLEGDATATYISRLLGETPGIRVSRLASGLPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRT 199
+Y D+ T+ A R
Sbjct: 181 EYADEVTLGRAFSGRR 196
>gi|291523177|emb|CBK81470.1| recombination protein RecR [Coprococcus catus GD/7]
Length = 198
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 122/196 (62%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+I LI+ L+++PG G +SA+R H++ + + LA + + K+ CS C N
Sbjct: 4 YSNQINKLIEELSKLPGIGAKSAQRLAFHIINMPKDQVQNLAGTIVSAREKIRYCSCCWN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ ++ C IC + +RD VI+VVE DL A E+++ +YHVL G++SP+ IGP DI
Sbjct: 64 LTDSELCPICANPKRDHHVIMVVETPRDLAAYEKTQKYEGVYHVLHGAISPMLGIGPSDI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R+ + E+I A ++T+EG+TTA YI +K +K+TR+A G+P+G +L+Y
Sbjct: 124 RLKELMTRL-QGDVTEVIIATNSTLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 IDEVTLLRALEGRTEL 198
>gi|282877375|ref|ZP_06286198.1| recombination protein RecR [Prevotella buccalis ATCC 35310]
gi|281300427|gb|EFA92773.1| recombination protein RecR [Prevotella buccalis ATCC 35310]
Length = 203
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 128/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + +++PG G ++A R LHL+++ + A A+A + +V C
Sbjct: 1 MEQQYPSVLLEKAVNEFSKLPGIGRKTALRLVLHLLRQSNSDVEQFASAIAKVKQEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ D C IC D +RD S+I VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 QVCHNISDEDVCPICSDPRRDTSLICVVENIQDVMAVENTQQFRGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + IQSL++R+E + E+I A+S+T+EG TT YI KL +DVK++ +A GI +G
Sbjct: 121 GPDQLEIQSLVQRVEQGGVSEVILALSSTMEGDTTNFYISRKLAPLDVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIVNRTPF 201
>gi|317126766|ref|YP_004093048.1| recombination protein RecR [Bacillus cellulosilyticus DSM 2522]
gi|315471714|gb|ADU28317.1| recombination protein RecR [Bacillus cellulosilyticus DSM 2522]
Length = 198
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ R+PG GP++A R +++ +E + A+A+ N ++ CS+C +
Sbjct: 3 YPQPISKLIEGFMRLPGIGPKTAARLAFYVLDMREDDVLDFAKALVNAKRQLTYCSVCHH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD +V+ VV++ D+ A+E+ K LYHVL G +SP+D IGPEDI
Sbjct: 63 ITDIDPCRICEDNGRDQTVLCVVQESKDVIAMEKMKEYTGLYHVLHGCISPVDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ I+E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L+Y
Sbjct: 123 YIPDLLKRLQDDTIQEVIIATNPNIEGEATAMYISRLIKPTGLKVTRIAHGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +AI R +
Sbjct: 183 ADEVTLSKAIEGRREI 198
>gi|227550402|ref|ZP_03980451.1| recombination protein RecR [Enterococcus faecium TX1330]
gi|227180461|gb|EEI61433.1| recombination protein RecR [Enterococcus faecium TX1330]
Length = 200
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + I LI ++PG G ++A R + + K++++ A+++ ++ + C
Sbjct: 1 MNMQY-PEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGN+ DPC IC + RD S+I+VVE+ D+ A+E+ + + LYHVL G LSP++
Sbjct: 60 SICGNITEEDPCEICRNPSRDRSIILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGT 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDI I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +G
Sbjct: 120 GPEDINISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S+++Y D+ T+ +A+ R L
Sbjct: 180 SDIEYADEVTLLKAVEGRREL 200
>gi|29831100|ref|NP_825734.1| recombination protein RecR [Streptomyces avermitilis MA-4680]
gi|297201258|ref|ZP_06918655.1| recombination protein RecR [Streptomyces sviceus ATCC 29083]
gi|73621518|sp|Q82EQ7|RECR_STRAW RecName: Full=Recombination protein recR
gi|29608214|dbj|BAC72269.1| putative recombination and repair protein [Streptomyces avermitilis
MA-4680]
gi|197712880|gb|EDY56914.1| recombination protein RecR [Streptomyces sviceus ATCC 29083]
Length = 199
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA+ + + KV C+ CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQCLMEVKAKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEELCNICRDPRRDLSVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|84495158|ref|ZP_00994277.1| recombination protein RecR [Janibacter sp. HTCC2649]
gi|84384651|gb|EAQ00531.1| recombination protein RecR [Janibacter sp. HTCC2649]
Length = 199
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + + L +A+ + KV C C
Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLTQDAVDVQRLVDALTQVKVKVRFCVTCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ ++ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D
Sbjct: 61 NIAESEQCRICADPRRDLTSICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + L+ R+ + E+I A +EG+ TA Y+ LKG+D+K+TRLA G+P+G +L+
Sbjct: 121 LTFRELMTRLASSDVTEIIIATDPNLEGEATASYLARFLKGMDIKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|218437593|ref|YP_002375922.1| recombination protein RecR [Cyanothece sp. PCC 7424]
gi|259563689|sp|B7KEM9|RECR_CYAP7 RecName: Full=Recombination protein recR
gi|218170321|gb|ACK69054.1| recombination protein RecR [Cyanothece sp. PCC 7424]
Length = 199
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI+ L R+PG GP++A+R LH++K+ E+ + LA+A+ +V LC +C
Sbjct: 1 MFTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPEEEVNTLAKAIVEAKKQVGLCQVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + RD + VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 61 HLSAESTCEICRNPNRDNQTLCVVADSRDVIALEKTREYQGKYHVLGGVISPMDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ +I+E+I AIS ++EG+TT Y+ LK K+TR+A+G+PMG +L+
Sbjct: 121 LNISPLVRRVSQHQIKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPMGGDLE 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 180 YADEVTLARALEGRREL 196
>gi|325264935|ref|ZP_08131663.1| recombination protein RecR [Clostridium sp. D5]
gi|324029924|gb|EGB91211.1| recombination protein RecR [Clostridium sp. D5]
Length = 198
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ +R+PG G +SA+R H++ ++ + LA+++ + N V C+ C
Sbjct: 2 DYYSNQISRLIEEFSRLPGIGAKSAQRLAFHIINMPQEQVENLAKSLVDARNNVRYCAQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDRELCPICNNPDRDQKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|220911470|ref|YP_002486779.1| recombination protein RecR [Arthrobacter chlorophenolicus A6]
gi|219858348|gb|ACL38690.1| recombination protein RecR [Arthrobacter chlorophenolicus A6]
Length = 199
Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 122/195 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ Q + L EA+ + ++V C++CG
Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKDRVKFCTVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD ++I VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE
Sbjct: 61 NVTEQELCNICRDPRRDPALICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+
Sbjct: 121 LRIRELLTRLNDGAIQEVIIATDPNLEGEATATYLARMLKTIGIAVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRR 195
>gi|154505549|ref|ZP_02042287.1| hypothetical protein RUMGNA_03086 [Ruminococcus gnavus ATCC 29149]
gi|153794207|gb|EDN76627.1| hypothetical protein RUMGNA_03086 [Ruminococcus gnavus ATCC 29149]
Length = 198
Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ +R+PG G +SA+R H++ + + LA+++ + N V C+ C
Sbjct: 2 DYYSNQISRLIEEFSRLPGIGAKSAQRLAFHIINMPKDQVENLAKSIVDARNNVRYCAQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +RD I+VVE DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDRELCPICSNPERDQRTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRLKELMERL-QQDVDEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|295107931|emb|CBL21884.1| recombination protein RecR [Ruminococcus obeum A2-162]
Length = 199
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 123/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI+ L+ +PG GP+SA+R H++ + + LA ++ K+ C C
Sbjct: 2 EYYSTHINKLIEQLSHLPGIGPKSAQRLAFHIMNMPKDQVEQLASSITGAREKIRYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +RDA I+VVE+ DL A E++ +YHVL G++SP+ IGP+
Sbjct: 62 CTLTDQELCPICSNPKRDAGTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R++ + I+E+I A ++++EG+TTA YI +K ++++R+A G+P+G +L
Sbjct: 122 DIRLKELMQRLQSEDIKEVIIATNSSLEGETTAMYISKLIKPTGIRVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLLRALEGRVDL 199
>gi|320529758|ref|ZP_08030836.1| recombination protein RecR [Selenomonas artemidis F0399]
gi|320137997|gb|EFW29901.1| recombination protein RecR [Selenomonas artemidis F0399]
Length = 198
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 118/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ L++ +PG G ++A R H++ + LA A+ K+ CS C N+
Sbjct: 6 PLTQLMEQFRALPGIGAKTAARLAYHVLDMDMERAQRLASAIVEAKRKIGFCSTCFNLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TDPCAIC ++RD SV+ VVE D+ A+ER + +YHVL G+LSPL+ +GP D+ I+
Sbjct: 66 TDPCAICTAEKRDHSVVCVVEQPPDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDLRIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ ++E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 126 ELVTRVGTTDVQEVIMATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 186 VTLSRAMENRREI 198
>gi|283458782|ref|YP_003363424.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18]
gi|283134839|dbj|BAI65604.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18]
Length = 384
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R H++ + LA A++ + V C CG
Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV T C IC D++RD SV+ VVE+ D+ A+ER+++ YHVLGG+++PL +GPE
Sbjct: 61 NVSETKLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + V+++RLA G+P+G +L+
Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R V+
Sbjct: 181 YADEITLGRALEGRRVI 197
>gi|257879312|ref|ZP_05658965.1| recombination protein recR [Enterococcus faecium 1,230,933]
gi|257881872|ref|ZP_05661525.1| recombination protein recR [Enterococcus faecium 1,231,502]
gi|257885060|ref|ZP_05664713.1| recombination protein recR [Enterococcus faecium 1,231,501]
gi|257890138|ref|ZP_05669791.1| recombination protein recR [Enterococcus faecium 1,231,410]
gi|257893466|ref|ZP_05673119.1| recombination protein recR [Enterococcus faecium 1,231,408]
gi|258615718|ref|ZP_05713488.1| recombination protein RecR [Enterococcus faecium DO]
gi|260558754|ref|ZP_05830943.1| recombination protein RecR [Enterococcus faecium C68]
gi|261207349|ref|ZP_05922036.1| recombination protein RecR [Enterococcus faecium TC 6]
gi|289566856|ref|ZP_06447265.1| recombination protein RecR [Enterococcus faecium D344SRF]
gi|293550623|ref|ZP_06673291.1| recombination protein RecR [Enterococcus faecium E1039]
gi|293559586|ref|ZP_06676120.1| recombination protein RecR [Enterococcus faecium E1162]
gi|294615744|ref|ZP_06695594.1| recombination protein RecR [Enterococcus faecium E1636]
gi|294617669|ref|ZP_06697296.1| recombination protein RecR [Enterococcus faecium E1679]
gi|294621755|ref|ZP_06700915.1| recombination protein RecR [Enterococcus faecium U0317]
gi|257813540|gb|EEV42298.1| recombination protein recR [Enterococcus faecium 1,230,933]
gi|257817530|gb|EEV44858.1| recombination protein recR [Enterococcus faecium 1,231,502]
gi|257820912|gb|EEV48046.1| recombination protein recR [Enterococcus faecium 1,231,501]
gi|257826498|gb|EEV53124.1| recombination protein recR [Enterococcus faecium 1,231,410]
gi|257829845|gb|EEV56452.1| recombination protein recR [Enterococcus faecium 1,231,408]
gi|260075213|gb|EEW63526.1| recombination protein RecR [Enterococcus faecium C68]
gi|260078409|gb|EEW66113.1| recombination protein RecR [Enterococcus faecium TC 6]
gi|289161344|gb|EFD09235.1| recombination protein RecR [Enterococcus faecium D344SRF]
gi|291591395|gb|EFF23054.1| recombination protein RecR [Enterococcus faecium E1636]
gi|291596076|gb|EFF27342.1| recombination protein RecR [Enterococcus faecium E1679]
gi|291598642|gb|EFF29699.1| recombination protein RecR [Enterococcus faecium U0317]
gi|291603244|gb|EFF33428.1| recombination protein RecR [Enterococcus faecium E1039]
gi|291606462|gb|EFF35862.1| recombination protein RecR [Enterococcus faecium E1162]
Length = 198
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN
Sbjct: 3 YPEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICRNPSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLLKAVEGRREL 198
>gi|23500947|ref|NP_697074.1| recombination protein RecR [Brucella suis 1330]
gi|62289020|ref|YP_220813.1| recombination protein RecR [Brucella abortus bv. 1 str. 9-941]
gi|82698958|ref|YP_413532.1| recombination protein RecR [Brucella melitensis biovar Abortus
2308]
gi|161618022|ref|YP_001591909.1| recombination protein RecR [Brucella canis ATCC 23365]
gi|163842308|ref|YP_001626712.1| recombination protein RecR [Brucella suis ATCC 23445]
gi|254690346|ref|ZP_05153600.1| recombination protein RecR [Brucella abortus bv. 6 str. 870]
gi|254694835|ref|ZP_05156663.1| recombination protein RecR [Brucella abortus bv. 3 str. Tulya]
gi|254696464|ref|ZP_05158292.1| recombination protein RecR [Brucella abortus bv. 2 str. 86/8/59]
gi|254700847|ref|ZP_05162675.1| recombination protein RecR [Brucella suis bv. 5 str. 513]
gi|254705214|ref|ZP_05167042.1| recombination protein RecR [Brucella suis bv. 3 str. 686]
gi|254707266|ref|ZP_05169094.1| recombination protein RecR [Brucella pinnipedialis M163/99/10]
gi|254709192|ref|ZP_05171003.1| recombination protein RecR [Brucella pinnipedialis B2/94]
gi|254713383|ref|ZP_05175194.1| recombination protein RecR [Brucella ceti M644/93/1]
gi|254716259|ref|ZP_05178070.1| recombination protein RecR [Brucella ceti M13/05/1]
gi|254731376|ref|ZP_05189954.1| recombination protein RecR [Brucella abortus bv. 4 str. 292]
gi|256030716|ref|ZP_05444330.1| recombination protein RecR [Brucella pinnipedialis M292/94/1]
gi|256060175|ref|ZP_05450355.1| recombination protein RecR [Brucella neotomae 5K33]
gi|256158722|ref|ZP_05456597.1| recombination protein RecR [Brucella ceti M490/95/1]
gi|256254120|ref|ZP_05459656.1| recombination protein RecR [Brucella ceti B1/94]
gi|256258600|ref|ZP_05464136.1| recombination protein RecR [Brucella abortus bv. 9 str. C68]
gi|256368499|ref|YP_003106005.1| recombination protein RecR [Brucella microti CCM 4915]
gi|260169619|ref|ZP_05756430.1| recombination protein RecR [Brucella sp. F5/99]
gi|260546314|ref|ZP_05822054.1| recombination protein recR [Brucella abortus NCTC 8038]
gi|260567319|ref|ZP_05837789.1| recombination protein recR [Brucella suis bv. 4 str. 40]
gi|260755888|ref|ZP_05868236.1| recombination protein recR [Brucella abortus bv. 6 str. 870]
gi|260759112|ref|ZP_05871460.1| recombination protein recR [Brucella abortus bv. 4 str. 292]
gi|260760837|ref|ZP_05873180.1| recombination protein recR [Brucella abortus bv. 2 str. 86/8/59]
gi|260884912|ref|ZP_05896526.1| recombination protein recR [Brucella abortus bv. 9 str. C68]
gi|261215163|ref|ZP_05929444.1| recombination protein recR [Brucella abortus bv. 3 str. Tulya]
gi|261218035|ref|ZP_05932316.1| recombination protein recR [Brucella ceti M13/05/1]
gi|261221262|ref|ZP_05935543.1| recombination protein recR [Brucella ceti B1/94]
gi|261314749|ref|ZP_05953946.1| recombination protein recR [Brucella pinnipedialis M163/99/10]
gi|261316692|ref|ZP_05955889.1| recombination protein recR [Brucella pinnipedialis B2/94]
gi|261321115|ref|ZP_05960312.1| recombination protein recR [Brucella ceti M644/93/1]
gi|261324152|ref|ZP_05963349.1| recombination protein recR [Brucella neotomae 5K33]
gi|261751357|ref|ZP_05995066.1| recombination protein recR [Brucella suis bv. 5 str. 513]
gi|261755922|ref|ZP_05999631.1| recombination protein recR [Brucella suis bv. 3 str. 686]
gi|261759148|ref|ZP_06002857.1| recombination protein recR [Brucella sp. F5/99]
gi|265987762|ref|ZP_06100319.1| recombination protein recR [Brucella pinnipedialis M292/94/1]
gi|265997223|ref|ZP_06109780.1| recombination protein recR [Brucella ceti M490/95/1]
gi|294851441|ref|ZP_06792114.1| recombination protein RecR [Brucella sp. NVSL 07-0026]
gi|38258603|sp|Q8G3B7|RECR_BRUSU RecName: Full=Recombination protein recR
gi|73621473|sp|Q57FY2|RECR_BRUAB RecName: Full=Recombination protein recR
gi|123546965|sp|Q2YPN0|RECR_BRUA2 RecName: Full=Recombination protein recR
gi|189029354|sp|A9M6N7|RECR_BRUC2 RecName: Full=Recombination protein recR
gi|189029355|sp|B0CI52|RECR_BRUSI RecName: Full=Recombination protein recR
gi|23346803|gb|AAN28989.1| recombination protein RecR [Brucella suis 1330]
gi|62195152|gb|AAX73452.1| RecR, recombination protein [Brucella abortus bv. 1 str. 9-941]
gi|82615059|emb|CAJ09985.1| RecR protein:Toprim sub-domain:TOPRIM [Brucella melitensis biovar
Abortus 2308]
gi|161334833|gb|ABX61138.1| recombination protein RecR [Brucella canis ATCC 23365]
gi|163673031|gb|ABY37142.1| recombination protein RecR [Brucella suis ATCC 23445]
gi|255998657|gb|ACU47056.1| recombination protein RecR [Brucella microti CCM 4915]
gi|260096421|gb|EEW80297.1| recombination protein recR [Brucella abortus NCTC 8038]
gi|260156837|gb|EEW91917.1| recombination protein recR [Brucella suis bv. 4 str. 40]
gi|260669430|gb|EEX56370.1| recombination protein recR [Brucella abortus bv. 4 str. 292]
gi|260671269|gb|EEX58090.1| recombination protein recR [Brucella abortus bv. 2 str. 86/8/59]
gi|260675996|gb|EEX62817.1| recombination protein recR [Brucella abortus bv. 6 str. 870]
gi|260874440|gb|EEX81509.1| recombination protein recR [Brucella abortus bv. 9 str. C68]
gi|260916770|gb|EEX83631.1| recombination protein recR [Brucella abortus bv. 3 str. Tulya]
gi|260919846|gb|EEX86499.1| recombination protein recR [Brucella ceti B1/94]
gi|260923124|gb|EEX89692.1| recombination protein recR [Brucella ceti M13/05/1]
gi|261293805|gb|EEX97301.1| recombination protein recR [Brucella ceti M644/93/1]
gi|261295915|gb|EEX99411.1| recombination protein recR [Brucella pinnipedialis B2/94]
gi|261300132|gb|EEY03629.1| recombination protein recR [Brucella neotomae 5K33]
gi|261303775|gb|EEY07272.1| recombination protein recR [Brucella pinnipedialis M163/99/10]
gi|261739132|gb|EEY27128.1| recombination protein recR [Brucella sp. F5/99]
gi|261741110|gb|EEY29036.1| recombination protein recR [Brucella suis bv. 5 str. 513]
gi|261745675|gb|EEY33601.1| recombination protein recR [Brucella suis bv. 3 str. 686]
gi|262551691|gb|EEZ07681.1| recombination protein recR [Brucella ceti M490/95/1]
gi|264659959|gb|EEZ30220.1| recombination protein recR [Brucella pinnipedialis M292/94/1]
gi|294820030|gb|EFG37029.1| recombination protein RecR [Brucella sp. NVSL 07-0026]
Length = 201
Score = 303 bits (778), Expect = 7e-81, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|119961171|ref|YP_946469.1| recombination protein RecR [Arthrobacter aurescens TC1]
gi|171704623|sp|A1R2K7|RECR_ARTAT RecName: Full=Recombination protein recR
gi|119948030|gb|ABM06941.1| recombination protein RecR [Arthrobacter aurescens TC1]
Length = 199
Score = 303 bits (778), Expect = 7e-81, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 120/195 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ + + L A+ + +V C++C
Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPEDMKRLVTAITTVKERVKFCTVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC DQ+RD SVI VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE
Sbjct: 61 NVTEQETCNICRDQRRDPSVICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+
Sbjct: 121 LRIRELLTRLNDGAIQEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRR 195
>gi|238926313|ref|ZP_04658073.1| recombination protein RecR [Selenomonas flueggei ATCC 43531]
gi|238885717|gb|EEQ49355.1| recombination protein RecR [Selenomonas flueggei ATCC 43531]
Length = 198
Score = 303 bits (778), Expect = 7e-81, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ L +PG G ++A R H++ + LA A+ K+ CS+C N+
Sbjct: 6 PLTQLIEQLRALPGIGAKTATRLAYHILDMDMERARRLAAAITGAKEKIGFCSVCFNLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+DPCA+C ++RD + I VVE D+ A+ER + +YHVL G+LSPL+ +GP DI I+
Sbjct: 66 SDPCAVCTAEKRDHTTICVVEQPQDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDIRIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R + I+E+I A + +EG+ TA YI LK + +++TR+A+G+P+G +L+Y D+
Sbjct: 126 ELVLRAGKEDIQEVIIATNPNVEGEATAMYIAKLLKPMGIRVTRIAHGLPVGGDLEYADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 186 VTLSRAMENRREI 198
>gi|255327657|ref|ZP_05368723.1| recombination protein RecR [Rothia mucilaginosa ATCC 25296]
gi|255295331|gb|EET74682.1| recombination protein RecR [Rothia mucilaginosa ATCC 25296]
Length = 380
Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R H++ + LA A++ + V C CG
Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV T C IC D++RD SV+ VVE+ D+ A+ER+++ YHVLGG+++PL +GPE
Sbjct: 61 NVSETKLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + V+++RLA G+P+G +L+
Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R V+
Sbjct: 181 YADEITLGRALEGRRVI 197
>gi|292669038|ref|ZP_06602464.1| recombination protein R [Selenomonas noxia ATCC 43541]
gi|292649293|gb|EFF67265.1| recombination protein R [Selenomonas noxia ATCC 43541]
Length = 198
Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 118/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ +PG G ++A R H++ + LA A+ K+ CS C N+
Sbjct: 6 PLTQLIEQFRTLPGIGAKTAARLAYHVLDMDMERARRLASAIVEAKEKIGFCSTCFNLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+DPCAIC+ ++RD ++I VVE D+ A+ER + +YHVL G+LSP++ IGP DI I+
Sbjct: 66 SDPCAICMAEKRDHTMICVVEQPPDVAAMERMNDYDGVYHVLHGALSPIEGIGPNDIRIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 126 ELVTRVGTTDVEEVIVATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 186 VTLSRAMENRREI 198
>gi|209522777|ref|ZP_03271335.1| recombination protein RecR [Arthrospira maxima CS-328]
gi|209496826|gb|EDZ97123.1| recombination protein RecR [Arthrospira maxima CS-328]
Length = 208
Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ R+PG GP++A+R LH++K+ E+ + LA A+ +V LC +C
Sbjct: 12 VYTRPLARLIEQFQRLPGIGPKTAQRLALHIIKRPEEEVQALARALLEAKKQVGLCQVCF 71
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + QRD I VV D D+ ALE+++ LYHVLGG +SP+D IGPE
Sbjct: 72 HLSAEPVCEICRNPQRDRETICVVSDSRDVIALEKTREYRGLYHVLGGVISPMDGIGPEQ 131
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ +Q L+ R+ ++++E+I A++ ++EG+TT Y+ LK ++TR+A+G+P+G +L+
Sbjct: 132 LTVQPLVRRVSQQQVKEVIIAVNPSVEGETTTLYLGQLLKPF-TRVTRIAFGLPVGGDLE 190
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 191 YADEVTLARALEGRREL 207
>gi|312622613|ref|YP_004024226.1| recombination protein recr [Caldicellulosiruptor kronotskyensis
2002]
gi|312203080|gb|ADQ46407.1| recombination protein RecR [Caldicellulosiruptor kronotskyensis
2002]
Length = 201
Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC
Sbjct: 1 MKMQQKENAISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 61 RVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G
Sbjct: 121 YPEQLTIDVLMKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 181 GDIEYADEVTILKAIEGRREI 201
>gi|269925418|ref|YP_003322041.1| recombination protein RecR [Thermobaculum terrenum ATCC BAA-798]
gi|269789078|gb|ACZ41219.1| recombination protein RecR [Thermobaculum terrenum ATCC BAA-798]
Length = 199
Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 82/196 (41%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + +E LI+ +++PG GP++A R T L++ ++ LA+A+ + K LCS C N
Sbjct: 4 TAEPVERLIEEFSKLPGIGPKTASRLTYWLLRSSKEQAESLADAIRELKEKTTLCSECFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD SVI VVE+ D+ A+E + LYHVL G LSPLD I P+ +
Sbjct: 64 ITDVDPCRICSSESRDRSVICVVEEPLDVRAIENTNEYKGLYHVLHGLLSPLDGITPDKL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+Q L +R+ ++E+I A + T+EG TA YI LK ++VKITRLAYG+P+G +L+Y
Sbjct: 124 KLQELKDRVARGGVKEVIIATNPTLEGSNTAFYIARLLKNLNVKITRLAYGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A++ R +
Sbjct: 184 ADEVTLSRALQGRQSI 199
>gi|217966693|ref|YP_002352199.1| recombination protein RecR [Dictyoglomus turgidum DSM 6724]
gi|217335792|gb|ACK41585.1| recombination protein RecR [Dictyoglomus turgidum DSM 6724]
Length = 200
Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats.
Identities = 83/198 (41%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 5 ITGKEI-ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K I E LI L ++PG GP+ A+R +L+K+ ++ + LA + + ++ CSIC
Sbjct: 1 MAEKSIFEKLIDELTKLPGIGPKLAQRIAFYLLKQPQESVEVLANTILKVKKEIKYCSIC 60
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ DPC IC + +RD S+I VV + DLWA+E++ + +YHVLGG +SPLD + PE
Sbjct: 61 FNLTEKDPCEICTNPERDKSIICVVAEPKDLWAIEKTSKFHGVYHVLGGLISPLDGVFPE 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L+ER++ I+E+I A +T EG+ TA YI L VK+TRLA+G+P G+EL
Sbjct: 121 DLRIKELMERVKKGNIKEVILATDSTPEGEATAMYIARLLMEYPVKVTRLAHGLPAGTEL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
D+ D+ T+ A+ R L
Sbjct: 181 DFADEMTLIHALEGRKEL 198
>gi|21263932|sp|Q8YMF7|RECR_ANASP RecName: Full=Recombination protein recR
Length = 197
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP++A+R LH++K+ E + LA+A+ ++ LCS+C
Sbjct: 1 MYARPLARLIEQLQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC + R+ + I VV D D+ ALE+++ YHVLGG +SP+D IGPE
Sbjct: 61 HLSSEPVCEICRNPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ ++ +E+I AIS ++EG+TT Y+ LK K+TR+A+G+P+G +L+
Sbjct: 121 LTITPLLRRVSQQQPKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPVGGDLE 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 180 YADEITLARALEGRREL 196
>gi|119714585|ref|YP_921550.1| recombination protein RecR [Nocardioides sp. JS614]
gi|171704603|sp|A1SDH8|RECR_NOCSJ RecName: Full=Recombination protein recR
gi|119535246|gb|ABL79863.1| DNA replication and repair protein RecR [Nocardioides sp. JS614]
Length = 199
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 120/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+ A+R HL++ + LA+ + + KV CSIC
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV D C IC D +RD SV+ VVE+ D+ A+ER++ YHVLGG++SP+D +GPE
Sbjct: 61 NVSQDDQCRICRDPRRDPSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I E+I A +EG+ TA Y+ LK +++++TRLA G+P+G +L+
Sbjct: 121 LRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLKPLELRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFAGRRS 196
>gi|311897062|dbj|BAJ29470.1| putative recombination protein RecR [Kitasatospora setae KM-6054]
Length = 199
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + LA A+ + KV C++CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQADPVDVRRLAHALQQVKEKVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C +C+D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEAERCRVCLDPRRDLAVICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A +EG+ TA Y+ K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELMTRLADGTVTELILATDPNLEGEATATYLARLCKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|306843632|ref|ZP_07476233.1| recombination protein RecR [Brucella sp. BO1]
gi|306276323|gb|EFM58023.1| recombination protein RecR [Brucella sp. BO1]
Length = 201
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVAGGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|284053205|ref|ZP_06383415.1| recombination protein RecR [Arthrospira platensis str. Paraca]
gi|291567039|dbj|BAI89311.1| recombination protein RecR [Arthrospira platensis NIES-39]
Length = 208
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ R+PG GP++A+R LH++K+ E+ + LA A+ +V LC +C
Sbjct: 12 VYTRPLARLIEQFQRLPGIGPKTAQRLALHIIKRPEEEVQALARALLEAKKQVGLCQVCF 71
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + QRD I VV D D+ ALE+++ LYHVLGG +SP+D IGPE
Sbjct: 72 HLSAEPVCEICRNPQRDRETICVVSDSRDVIALEKTREYRGLYHVLGGVISPMDGIGPEQ 131
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ +Q L+ R+ +K +E+I A++ ++EG+TT Y+ LK ++TR+A+G+P+G +L+
Sbjct: 132 LTVQPLVRRVSQQKFKEVIIAVNPSVEGETTTLYLGQLLKPF-TRVTRIAFGLPVGGDLE 190
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 191 YADEVTLARALEGRREL 207
>gi|257888431|ref|ZP_05668084.1| recombination protein recR [Enterococcus faecium 1,141,733]
gi|257897194|ref|ZP_05676847.1| recombination protein recR [Enterococcus faecium Com12]
gi|257899192|ref|ZP_05678845.1| recombination protein recR [Enterococcus faecium Com15]
gi|293379611|ref|ZP_06625748.1| recombination protein RecR [Enterococcus faecium PC4.1]
gi|293572058|ref|ZP_06683069.1| recombination protein RecR [Enterococcus faecium E980]
gi|257824485|gb|EEV51417.1| recombination protein recR [Enterococcus faecium 1,141,733]
gi|257833759|gb|EEV60180.1| recombination protein recR [Enterococcus faecium Com12]
gi|257837104|gb|EEV62178.1| recombination protein recR [Enterococcus faecium Com15]
gi|291607843|gb|EFF37154.1| recombination protein RecR [Enterococcus faecium E980]
gi|292641760|gb|EFF59933.1| recombination protein RecR [Enterococcus faecium PC4.1]
Length = 198
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN
Sbjct: 3 YPEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD S+I+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICRNPSRDRSIILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLLKAVEGRREL 198
>gi|222529136|ref|YP_002573018.1| recombination protein RecR [Caldicellulosiruptor bescii DSM 6725]
gi|222455983|gb|ACM60245.1| recombination protein RecR [Caldicellulosiruptor bescii DSM 6725]
Length = 201
Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC
Sbjct: 1 MKMQQKENAISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 61 RVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G
Sbjct: 121 YPEQLTIDVLLKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 181 GDIEYADEVTILKAIEGRREI 201
>gi|313895449|ref|ZP_07829006.1| recombination protein RecR [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976344|gb|EFR41802.1| recombination protein RecR [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 198
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 117/193 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ L++ +PG G ++A R H++ + LA A+ K+ CS C N+
Sbjct: 6 PLTQLMEQFRALPGIGAKTAARLAYHVLDMDMERAQRLASAIVEAKRKIGFCSTCFNLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TDPC IC ++RD SV+ VVE D+ A+ER + +YHVL G+LSPL+ +GP D+ I+
Sbjct: 66 TDPCVICTAEKRDHSVVCVVEQPPDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDLRIK 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ ++E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+
Sbjct: 126 ELVTRVGTTDVQEVIMATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADE 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 186 VTLSRAMENRREI 198
>gi|86355783|ref|YP_467675.1| recombination protein RecR [Rhizobium etli CFN 42]
gi|123513433|sp|Q2KDY8|RECR_RHIEC RecName: Full=Recombination protein recR
gi|86279885|gb|ABC88948.1| DNA recombination protein [Rhizobium etli CFN 42]
Length = 201
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 136/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|313764792|gb|EFS36156.1| recombination protein RecR [Propionibacterium acnes HL013PA1]
gi|313815377|gb|EFS53091.1| recombination protein RecR [Propionibacterium acnes HL059PA1]
gi|314916441|gb|EFS80272.1| recombination protein RecR [Propionibacterium acnes HL005PA4]
gi|314917282|gb|EFS81113.1| recombination protein RecR [Propionibacterium acnes HL050PA1]
gi|314921657|gb|EFS85488.1| recombination protein RecR [Propionibacterium acnes HL050PA3]
gi|314930697|gb|EFS94528.1| recombination protein RecR [Propionibacterium acnes HL067PA1]
gi|314955186|gb|EFS99591.1| recombination protein RecR [Propionibacterium acnes HL027PA1]
gi|314959379|gb|EFT03481.1| recombination protein RecR [Propionibacterium acnes HL002PA1]
gi|315099546|gb|EFT71522.1| recombination protein RecR [Propionibacterium acnes HL059PA2]
gi|315102224|gb|EFT74200.1| recombination protein RecR [Propionibacterium acnes HL046PA1]
gi|327454473|gb|EGF01128.1| recombination protein RecR [Propionibacterium acnes HL087PA3]
gi|327456542|gb|EGF03197.1| recombination protein RecR [Propionibacterium acnes HL083PA2]
gi|328756236|gb|EGF69852.1| recombination protein RecR [Propionibacterium acnes HL087PA1]
gi|328759441|gb|EGF73057.1| recombination protein RecR [Propionibacterium acnes HL025PA2]
Length = 201
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 118/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP+ A+R H++ E+ LA+A+ + K C IC
Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPEEEANELADALREVKEKAKFCKICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D
Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+
Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGR 194
>gi|312127801|ref|YP_003992675.1| recombination protein recr [Caldicellulosiruptor hydrothermalis
108]
gi|311777820|gb|ADQ07306.1| recombination protein RecR [Caldicellulosiruptor hydrothermalis
108]
Length = 199
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 123/201 (61%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+K I LI+ L ++PG G ++A+R +++ K + + LA+A+ + LC
Sbjct: 1 MQQK--ENSISKLIQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKTSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 KVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G
Sbjct: 119 YPEQLTIDVLMKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 179 GDIEYADEVTILKAIEGRREI 199
>gi|329939343|ref|ZP_08288679.1| DNA modification/recombination protein [Streptomyces
griseoaurantiacus M045]
gi|329301572|gb|EGG45466.1| DNA modification/recombination protein [Streptomyces
griseoaurantiacus M045]
Length = 195
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 78/192 (40%), Positives = 125/192 (65%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV
Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCSVCGNVAQE 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CAIC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+
Sbjct: 62 ERCAICRDARRDLAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+
Sbjct: 122 LLARLADGAVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 181
Query: 190 TIFEAIRSRTVL 201
T+ A R +L
Sbjct: 182 TLGRAFEGRRLL 193
>gi|290958616|ref|YP_003489798.1| DNA modification/recombination protein [Streptomyces scabiei 87.22]
gi|260648142|emb|CBG71250.1| putative DNA modification/recombination protein [Streptomyces
scabiei 87.22]
Length = 199
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAQEELCGICRDSRRDVTVICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELLARLADGRVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|261338426|ref|ZP_05966310.1| recombination protein RecR [Bifidobacterium gallicum DSM 20093]
gi|270276402|gb|EFA22256.1| recombination protein RecR [Bifidobacterium gallicum DSM 20093]
Length = 200
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 127/199 (63%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R HL+ ++ LA+A+ + +KV C
Sbjct: 1 MALAYDG-AIQRLIDAFASLPGIGPKGAQRIAFHLLSASDEEAQRLADAIEEVKHKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PCAIC D +RD ++I VVE+ D+ ++ER++ LYHVLGG+++P+ I
Sbjct: 60 EICGNVCETSPCAICSDPRRDHTMICVVEEPKDVMSIERTREYRGLYHVLGGTINPMANI 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I +L++R++ + E+I A++ IEG+ T Y+ L +++K+TRLA G+P+G
Sbjct: 120 GPNDLAIPALLDRLKDDSVTEVIVALNPNIEGEATTTYLSRLLSPLEIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
++L+Y D+ T+ A+ R
Sbjct: 180 ADLEYADEITLSRALMGRR 198
>gi|325570728|ref|ZP_08146454.1| recombination protein R [Enterococcus casseliflavus ATCC 12755]
gi|325156574|gb|EGC68754.1| recombination protein R [Enterococcus casseliflavus ATCC 12755]
Length = 200
Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 126/201 (62%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + I LI ++PG G ++A R + + KE+++ A+++ ++ + C
Sbjct: 1 MTVQY-PEPIARLIDSYMKLPGIGQKTATRLAFYTIDMKEEVVNEFAKSLLSVKRDLHFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGN+ DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++
Sbjct: 60 SICGNITEEDPCEICSDPTRDKETILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGT 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDI I SLI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +G
Sbjct: 120 GPEDINIASLIQRLHDDQVKEVIIATNATTEGEATAMYMSRLIKPAGIKVTRLAHGLSVG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S+++Y D+ T+ +A+ R L
Sbjct: 180 SDIEYADEVTLLKAVEGRREL 200
>gi|291165758|gb|EFE27806.1| recombination protein RecR [Filifactor alocis ATCC 35896]
Length = 199
Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I+ LI+ L ++PG G ++A+R +++ + + LA AM N + C +C
Sbjct: 2 QHYSNHIDQLIERLGKLPGIGYKTAQRLAFYIINMPKDEVIGLANAMQNAKEHITYCEVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ +PC+IC + RD++ I VVED D+ A+ER++ + YHVL G++SP I P+
Sbjct: 62 YNISDANPCSICDSKTRDSATICVVEDPRDVAAMERTREYHGKYHVLHGTISPSQAITPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I I+ L+ R+ +I+E+I A + TI+G+ TA Y+ +K +K+TR+A+G+P+G+ L
Sbjct: 122 MIRIKELMSRLHDPEIKEIIIATNTTIDGEATAMYLARLIKPFGIKVTRIAHGLPVGANL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ DD TI A+ R L
Sbjct: 182 EFADDVTIGRALEGRREL 199
>gi|153813527|ref|ZP_01966195.1| hypothetical protein RUMOBE_03949 [Ruminococcus obeum ATCC 29174]
gi|149830398|gb|EDM85490.1| hypothetical protein RUMOBE_03949 [Ruminococcus obeum ATCC 29174]
Length = 199
Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 123/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI+ L+ +PG GP+SA+R H++ + + L ++ K+ C C
Sbjct: 2 EYYSTHINKLIEQLSHLPGIGPKSAQRLAFHIMNMPKDQVEQLTSSITGAREKIRYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +RDAS I+VVE+ DL A E++ +YHVL G++SP+ IGP+
Sbjct: 62 CTLTDQELCPICSNPKRDASTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R++ + I+E+I A ++++EG+TTA YI +K ++++R+A G+P+G +L
Sbjct: 122 DIRLKELMKRLQTEDIKEVIIATNSSLEGETTAMYISKLIKPTGIRVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLLRALEGRVDL 199
>gi|254718253|ref|ZP_05180064.1| recombination protein RecR [Brucella sp. 83/13]
gi|265983213|ref|ZP_06095948.1| recombination protein recR [Brucella sp. 83/13]
gi|306839995|ref|ZP_07472789.1| recombination protein RecR [Brucella sp. NF 2653]
gi|306842675|ref|ZP_07475319.1| recombination protein RecR [Brucella sp. BO2]
gi|264661805|gb|EEZ32066.1| recombination protein recR [Brucella sp. 83/13]
gi|306287184|gb|EFM58683.1| recombination protein RecR [Brucella sp. BO2]
gi|306404959|gb|EFM61244.1| recombination protein RecR [Brucella sp. NF 2653]
Length = 201
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC DQ+RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDQRRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVAGGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|209551645|ref|YP_002283562.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226726306|sp|B5ZW36|RECR_RHILW RecName: Full=Recombination protein recR
gi|209537401|gb|ACI57336.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 201
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 135/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD S+IIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSIIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLNVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|308176116|ref|YP_003915522.1| recombination protein recR [Arthrobacter arilaitensis Re117]
gi|307743579|emb|CBT74551.1| recombination protein recR [Arthrobacter arilaitensis Re117]
Length = 270
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 119/196 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H++ + + LA ++ + KV C IC
Sbjct: 1 MYEGAVQELIDELGRLPGIGPKSAQRIAFHILDADAEDMTRLAASIQLVKEKVKFCEICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + CAIC D++RD + I +VE+ D+ A+ER++A + YHVLGGS++PL IGPE
Sbjct: 61 NISEQEICAICRDERRDGTKICIVEESKDVLAIERTRAFSGKYHVLGGSINPLAGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I ELI A +EG+ TA Y++ L + + ITRLA G+P+G +L+
Sbjct: 121 LHIRELVTRLADDSITELILATDPNLEGEATAVYLVRALAPLGIHITRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEVTLARAFEGRRA 196
>gi|256826357|ref|YP_003150317.1| DNA replication and repair protein RecR [Kytococcus sedentarius DSM
20547]
gi|256689750|gb|ACV07552.1| DNA replication and repair protein RecR [Kytococcus sedentarius DSM
20547]
Length = 204
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 124/196 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H++ + + LA A+ + KV C+ CG
Sbjct: 1 MYEGAVQDLIDELNRLPGVGPKSAQRIAFHVLAADAEDVQRLATALQVVKEKVRFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC+D QRD + I VVE+ D+ A+ER++ YHVLGG++SPLD IGP+D
Sbjct: 61 NVAEAEECRICLDPQRDGTAICVVEEPRDVQAIERTREFRGRYHVLGGAISPLDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++R+ ++ E+I A +EG+ TA Y+ L+ +++K++RLA G+P+G +L+
Sbjct: 121 LRIAQLMQRLGDGEVTEVIIATDPNMEGEATATYLSRMLQVLEIKVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R V
Sbjct: 181 YADEVTLGRAFEGRRV 196
>gi|257867901|ref|ZP_05647554.1| recombination protein recR [Enterococcus casseliflavus EC30]
gi|257874230|ref|ZP_05653883.1| recombination protein recR [Enterococcus casseliflavus EC10]
gi|257876794|ref|ZP_05656447.1| recombination protein recR [Enterococcus casseliflavus EC20]
gi|257801984|gb|EEV30887.1| recombination protein recR [Enterococcus casseliflavus EC30]
gi|257808394|gb|EEV37216.1| recombination protein recR [Enterococcus casseliflavus EC10]
gi|257810960|gb|EEV39780.1| recombination protein recR [Enterococcus casseliflavus EC20]
Length = 198
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + KE+++ A+++ ++ + CSICGN
Sbjct: 3 YPEPIARLIDSYMKLPGIGQKTATRLAFYTIDMKEEVVNEFAKSLLSVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICSDPTRDKETILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIQRLHDDQVKEVIIATNATTEGEATAMYMSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLLKAVEGRREL 198
>gi|163842076|ref|YP_001626481.1| recombination protein RecR [Renibacterium salmoninarum ATCC 33209]
gi|162955552|gb|ABY25067.1| recombination protein [Renibacterium salmoninarum ATCC 33209]
Length = 199
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 123/195 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + L ++ + +V CSICG
Sbjct: 1 MYEGAVQDLIDELGRLPGIGPKSAQRLAFHILEADPEDMKRLVTSIVTVKERVKFCSICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV D C+IC D +RD ++I VVE+ D+ A+ER+++ LYHVLGG+++P+ +GP+
Sbjct: 61 NVAEQDTCSICRDPRRDPTIICVVEESKDVIAVERTRSFRGLYHVLGGAINPIAGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ +I E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+
Sbjct: 121 LRIRELLNRLSDSQIEEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGRR 195
>gi|291546692|emb|CBL19800.1| recombination protein RecR [Ruminococcus sp. SR1/5]
Length = 198
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI+ L+ +PG G +SA+R H++ + + L ++ + V C C
Sbjct: 2 EYYSSHINKLIEQLSHLPGIGAKSAQRLAFHIMNMPKDQVEQLTASITDARQNVQYCKCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +RD S I+VVE+ DL A E++ + +YHVL G++SP+ IGP+
Sbjct: 62 YTLTDQELCPICANPKRDHSTIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ ++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMKRL-QGDVKEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 181 EYIDEVTLLRALEGRVEL 198
>gi|172056064|ref|YP_001812524.1| recombination protein RecR [Exiguobacterium sibiricum 255-15]
gi|229890150|sp|B1YGD0|RECR_EXIS2 RecName: Full=Recombination protein recR
gi|171988585|gb|ACB59507.1| recombination protein RecR [Exiguobacterium sibiricum 255-15]
Length = 199
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG GP++A R H++ +E + +A+ + + CSICGN
Sbjct: 3 YPEAISRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLMFGKALVSAKRDISYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC +C D+ R+ +++ VV+D D+ A+E+ + LYHVL G++SP++ IGPEDI
Sbjct: 63 ITDKDPCYVCSDKHRNRTIVCVVQDSRDVIAMEKMRDYQGLYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ SL+ R + I E+I A + IEG+ TA Y+ LK +++TR+A+G+P+G +L+
Sbjct: 123 NVSSLLTRLQADEAITEIILATNPNIEGEATAMYLSRLLKPTGIRVTRIAHGLPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 183 YADEVTLSRAMEGRREL 199
>gi|284028401|ref|YP_003378332.1| recombination protein RecR [Kribbella flavida DSM 17836]
gi|283807694|gb|ADB29533.1| recombination protein RecR [Kribbella flavida DSM 17836]
Length = 199
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ E + LA + + KV C ICG
Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLSADETDVRRLAHVLVQVKEKVKFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ IGP++
Sbjct: 61 NVAEETMCRICRDPRRDLALICVVEEAKDVVAIERTREFRGRYHVLGGAISPIEGIGPDE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ ++ E+I A +EG+ TA Y+ L+ + +++TRLA G+P+G +L+
Sbjct: 121 LRIRELMQRLASGEVTEIILATDPNLEGEATATYLSRLLRPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +
Sbjct: 181 YADEVTLGRAFEGRRSI 197
>gi|190889792|ref|YP_001976334.1| DNA recombination protein [Rhizobium etli CIAT 652]
gi|229470340|sp|B3PXF0|RECR_RHIE6 RecName: Full=Recombination protein recR
gi|190695071|gb|ACE89156.1| DNA recombination protein [Rhizobium etli CIAT 652]
gi|327190228|gb|EGE57331.1| DNA recombination protein [Rhizobium etli CNPAF512]
Length = 201
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 137/201 (68%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|327334776|gb|EGE76487.1| recombination protein RecR [Propionibacterium acnes HL097PA1]
Length = 201
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 117/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC
Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D
Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+
Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGR 194
>gi|119025156|ref|YP_909001.1| recombination protein RecR [Bifidobacterium adolescentis ATCC
15703]
gi|166221925|sp|A0ZZN6|RECR_BIFAA RecName: Full=Recombination protein recR
gi|118764740|dbj|BAF38919.1| recombination protein recR [Bifidobacterium adolescentis ATCC
15703]
Length = 200
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PC +C D +RD SVI VVE+ D+ ++ER++ +YHVLGG ++P+ +
Sbjct: 60 DICGNVCETSPCPVCADPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G
Sbjct: 120 QPSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A+ R
Sbjct: 180 GDLEYADEITLGRALAGRRA 199
>gi|213691082|ref|YP_002321668.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296453326|ref|YP_003660469.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JDM301]
gi|254790753|sp|B7GT67|RECR_BIFLI RecName: Full=Recombination protein recR
gi|213522543|gb|ACJ51290.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296182757|gb|ADG99638.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JDM301]
gi|320457138|dbj|BAJ67759.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 200
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 125/200 (62%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI R+PG GP+ A+R +++ E LAEA+ + K+ C
Sbjct: 1 MALAYDG-AIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV + PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ +
Sbjct: 60 DICGNVCESSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL++R+E +++E+I A+ IEG+ T Y+ L+ + VK+TRLA G+P+G
Sbjct: 120 GPADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
S+L+Y D+ T+ A+ R
Sbjct: 180 SDLEYADEITLGRALAGRRE 199
>gi|50841698|ref|YP_054925.1| putative recombination protein RecR [Propionibacterium acnes
KPA171202]
gi|282853261|ref|ZP_06262598.1| recombination protein RecR [Propionibacterium acnes J139]
gi|289424537|ref|ZP_06426320.1| recombination protein RecR [Propionibacterium acnes SK187]
gi|289428817|ref|ZP_06430497.1| recombination protein RecR [Propionibacterium acnes J165]
gi|295129773|ref|YP_003580436.1| recombination protein RecR [Propionibacterium acnes SK137]
gi|73621506|sp|Q6AB99|RECR_PROAC RecName: Full=Recombination protein recR
gi|50839300|gb|AAT81967.1| putative recombination protein RecR [Propionibacterium acnes
KPA171202]
gi|282582714|gb|EFB88094.1| recombination protein RecR [Propionibacterium acnes J139]
gi|289155234|gb|EFD03916.1| recombination protein RecR [Propionibacterium acnes SK187]
gi|289157818|gb|EFD06041.1| recombination protein RecR [Propionibacterium acnes J165]
gi|291375135|gb|ADD98989.1| recombination protein RecR [Propionibacterium acnes SK137]
gi|313772742|gb|EFS38708.1| recombination protein RecR [Propionibacterium acnes HL074PA1]
gi|313793233|gb|EFS41300.1| recombination protein RecR [Propionibacterium acnes HL110PA1]
gi|313802803|gb|EFS44019.1| recombination protein RecR [Propionibacterium acnes HL110PA2]
gi|313806719|gb|EFS45224.1| recombination protein RecR [Propionibacterium acnes HL087PA2]
gi|313811223|gb|EFS48937.1| recombination protein RecR [Propionibacterium acnes HL083PA1]
gi|313813995|gb|EFS51709.1| recombination protein RecR [Propionibacterium acnes HL025PA1]
gi|313817486|gb|EFS55200.1| recombination protein RecR [Propionibacterium acnes HL046PA2]
gi|313821298|gb|EFS59012.1| recombination protein RecR [Propionibacterium acnes HL036PA1]
gi|313824760|gb|EFS62474.1| recombination protein RecR [Propionibacterium acnes HL036PA2]
gi|313826422|gb|EFS64136.1| recombination protein RecR [Propionibacterium acnes HL063PA1]
gi|313828819|gb|EFS66533.1| recombination protein RecR [Propionibacterium acnes HL063PA2]
gi|313832226|gb|EFS69940.1| recombination protein RecR [Propionibacterium acnes HL007PA1]
gi|313834282|gb|EFS71996.1| recombination protein RecR [Propionibacterium acnes HL056PA1]
gi|313840339|gb|EFS78053.1| recombination protein RecR [Propionibacterium acnes HL086PA1]
gi|314922446|gb|EFS86277.1| recombination protein RecR [Propionibacterium acnes HL001PA1]
gi|314926532|gb|EFS90363.1| recombination protein RecR [Propionibacterium acnes HL036PA3]
gi|314961564|gb|EFT05665.1| recombination protein RecR [Propionibacterium acnes HL002PA2]
gi|314964644|gb|EFT08744.1| recombination protein RecR [Propionibacterium acnes HL082PA1]
gi|314969352|gb|EFT13450.1| recombination protein RecR [Propionibacterium acnes HL037PA1]
gi|314974377|gb|EFT18472.1| recombination protein RecR [Propionibacterium acnes HL053PA1]
gi|314976989|gb|EFT21084.1| recombination protein RecR [Propionibacterium acnes HL045PA1]
gi|314980019|gb|EFT24113.1| recombination protein RecR [Propionibacterium acnes HL072PA2]
gi|314982795|gb|EFT26887.1| recombination protein RecR [Propionibacterium acnes HL110PA3]
gi|314985373|gb|EFT29465.1| recombination protein RecR [Propionibacterium acnes HL005PA1]
gi|314987436|gb|EFT31527.1| recombination protein RecR [Propionibacterium acnes HL005PA2]
gi|314989200|gb|EFT33291.1| recombination protein RecR [Propionibacterium acnes HL005PA3]
gi|315078846|gb|EFT50868.1| recombination protein RecR [Propionibacterium acnes HL053PA2]
gi|315081811|gb|EFT53787.1| recombination protein RecR [Propionibacterium acnes HL078PA1]
gi|315082835|gb|EFT54811.1| recombination protein RecR [Propionibacterium acnes HL027PA2]
gi|315086410|gb|EFT58386.1| recombination protein RecR [Propionibacterium acnes HL002PA3]
gi|315087897|gb|EFT59873.1| recombination protein RecR [Propionibacterium acnes HL072PA1]
gi|315091448|gb|EFT63424.1| recombination protein RecR [Propionibacterium acnes HL110PA4]
gi|315094386|gb|EFT66362.1| recombination protein RecR [Propionibacterium acnes HL060PA1]
gi|315097212|gb|EFT69188.1| recombination protein RecR [Propionibacterium acnes HL038PA1]
gi|315105108|gb|EFT77084.1| recombination protein RecR [Propionibacterium acnes HL050PA2]
gi|315107697|gb|EFT79673.1| recombination protein RecR [Propionibacterium acnes HL030PA1]
gi|315109894|gb|EFT81870.1| recombination protein RecR [Propionibacterium acnes HL030PA2]
gi|327331272|gb|EGE73011.1| recombination protein RecR [Propionibacterium acnes HL096PA2]
gi|327333905|gb|EGE75622.1| recombination protein RecR [Propionibacterium acnes HL096PA3]
gi|327444626|gb|EGE91280.1| recombination protein RecR [Propionibacterium acnes HL013PA2]
gi|327447350|gb|EGE94004.1| recombination protein RecR [Propionibacterium acnes HL043PA1]
gi|327450462|gb|EGE97116.1| recombination protein RecR [Propionibacterium acnes HL043PA2]
gi|327457182|gb|EGF03837.1| recombination protein RecR [Propionibacterium acnes HL092PA1]
gi|328758130|gb|EGF71746.1| recombination protein RecR [Propionibacterium acnes HL020PA1]
gi|328761181|gb|EGF74723.1| recombination protein RecR [Propionibacterium acnes HL099PA1]
gi|332674612|gb|AEE71428.1| recombination protein RecR [Propionibacterium acnes 266]
Length = 201
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 117/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC
Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D
Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+
Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGR 194
>gi|257869780|ref|ZP_05649433.1| recombination protein recR [Enterococcus gallinarum EG2]
gi|257803944|gb|EEV32766.1| recombination protein recR [Enterococcus gallinarum EG2]
Length = 198
Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN
Sbjct: 3 YPEPIARLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEGDPCEICSDPSRDKGTILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIAPLIQRLHDDQVKEVIIATNATTEGEATAIYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLLKAVEGRREL 198
>gi|229816761|ref|ZP_04447043.1| hypothetical protein BIFANG_02008 [Bifidobacterium angulatum DSM
20098]
gi|229785777|gb|EEP21891.1| hypothetical protein BIFANG_02008 [Bifidobacterium angulatum DSM
20098]
Length = 200
Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 123/200 (61%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI +++PG GP+ A+R +++ E+ LA+A+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDAFSKLPGIGPKGAQRIAFYILGSDEREAADLADAITEVKAKVKFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGNV PC +C+D +RD S+I VVE+ D+ ++ER++ + LYHVLGG+++P+ +
Sbjct: 60 EVCGNVCEASPCPVCLDPRRDHSIICVVEEPKDVMSIERTREYHGLYHVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L+ER+ + E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G
Sbjct: 120 GPNDLNIAKLLERLGDGSVTEVILALDPNIEGEATTTYLSRLLSQVGIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
S+L+Y D+ T+ A+ R
Sbjct: 180 SDLEYADEITLGRALSGRRE 199
>gi|331092481|ref|ZP_08341304.1| recombination protein recR [Lachnospiraceae bacterium 2_1_46FAA]
gi|330400984|gb|EGG80584.1| recombination protein recR [Lachnospiraceae bacterium 2_1_46FAA]
Length = 198
Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+R+PG G +SA+R H++ ++ + +A AM N V CS C
Sbjct: 2 DYYSSQISKLIEELSRLPGIGAKSAQRLAFHIIHMPKEQVEQMANAMVEARNNVRYCSKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC D RD I+VVE DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 YTLTDREVCPICSDDSRDEKTIMVVETTRDLVAYEKTGKYRGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|227519452|ref|ZP_03949501.1| recombination protein RecR [Enterococcus faecalis TX0104]
gi|229549119|ref|ZP_04437844.1| recombination protein RecR [Enterococcus faecalis ATCC 29200]
gi|255971838|ref|ZP_05422424.1| recombination protein RecR [Enterococcus faecalis T1]
gi|255974834|ref|ZP_05425420.1| recombination protein RecR [Enterococcus faecalis T2]
gi|256616734|ref|ZP_05473580.1| recombination protein RecR [Enterococcus faecalis ATCC 4200]
gi|256763387|ref|ZP_05503967.1| recombination protein RecR [Enterococcus faecalis T3]
gi|256957991|ref|ZP_05562162.1| recombination protein RecR [Enterococcus faecalis DS5]
gi|256960989|ref|ZP_05565160.1| recombination protein RecR [Enterococcus faecalis Merz96]
gi|256963868|ref|ZP_05568039.1| recombination protein RecR [Enterococcus faecalis HIP11704]
gi|257079928|ref|ZP_05574289.1| recombination protein RecR [Enterococcus faecalis JH1]
gi|257081674|ref|ZP_05576035.1| recombination protein RecR [Enterococcus faecalis E1Sol]
gi|257084271|ref|ZP_05578632.1| recombination protein RecR [Enterococcus faecalis Fly1]
gi|257087730|ref|ZP_05582091.1| recombination protein RecR [Enterococcus faecalis D6]
gi|257091002|ref|ZP_05585363.1| recombination protein recR [Enterococcus faecalis CH188]
gi|257416933|ref|ZP_05593927.1| recombination protein RecR [Enterococcus faecalis AR01/DG]
gi|257420152|ref|ZP_05597146.1| recombination protein recR [Enterococcus faecalis T11]
gi|257421625|ref|ZP_05598615.1| recombination protein recR [Enterococcus faecalis X98]
gi|293384624|ref|ZP_06630489.1| recombination protein RecR [Enterococcus faecalis R712]
gi|293386763|ref|ZP_06631334.1| recombination protein RecR [Enterococcus faecalis S613]
gi|294779712|ref|ZP_06745100.1| recombination protein RecR [Enterococcus faecalis PC1.1]
gi|300860165|ref|ZP_07106252.1| recombination protein RecR [Enterococcus faecalis TUSoD Ef11]
gi|307269206|ref|ZP_07550560.1| recombination protein RecR [Enterococcus faecalis TX4248]
gi|307271816|ref|ZP_07553087.1| recombination protein RecR [Enterococcus faecalis TX0855]
gi|307277001|ref|ZP_07558111.1| recombination protein RecR [Enterococcus faecalis TX2134]
gi|307278694|ref|ZP_07559762.1| recombination protein RecR [Enterococcus faecalis TX0860]
gi|307288617|ref|ZP_07568598.1| recombination protein RecR [Enterococcus faecalis TX0109]
gi|307290231|ref|ZP_07570147.1| recombination protein RecR [Enterococcus faecalis TX0411]
gi|312900124|ref|ZP_07759440.1| recombination protein RecR [Enterococcus faecalis TX0470]
gi|312906448|ref|ZP_07765456.1| recombination protein RecR [Enterococcus faecalis DAPTO 512]
gi|312951939|ref|ZP_07770827.1| recombination protein RecR [Enterococcus faecalis TX0102]
gi|312979394|ref|ZP_07791082.1| recombination protein RecR [Enterococcus faecalis DAPTO 516]
gi|227073064|gb|EEI11027.1| recombination protein RecR [Enterococcus faecalis TX0104]
gi|229305744|gb|EEN71740.1| recombination protein RecR [Enterococcus faecalis ATCC 29200]
gi|255962856|gb|EET95332.1| recombination protein RecR [Enterococcus faecalis T1]
gi|255967706|gb|EET98328.1| recombination protein RecR [Enterococcus faecalis T2]
gi|256596261|gb|EEU15437.1| recombination protein RecR [Enterococcus faecalis ATCC 4200]
gi|256684638|gb|EEU24333.1| recombination protein RecR [Enterococcus faecalis T3]
gi|256948487|gb|EEU65119.1| recombination protein RecR [Enterococcus faecalis DS5]
gi|256951485|gb|EEU68117.1| recombination protein RecR [Enterococcus faecalis Merz96]
gi|256954364|gb|EEU70996.1| recombination protein RecR [Enterococcus faecalis HIP11704]
gi|256987958|gb|EEU75260.1| recombination protein RecR [Enterococcus faecalis JH1]
gi|256989704|gb|EEU77006.1| recombination protein RecR [Enterococcus faecalis E1Sol]
gi|256992301|gb|EEU79603.1| recombination protein RecR [Enterococcus faecalis Fly1]
gi|256995760|gb|EEU83062.1| recombination protein RecR [Enterococcus faecalis D6]
gi|256999814|gb|EEU86334.1| recombination protein recR [Enterococcus faecalis CH188]
gi|257158761|gb|EEU88721.1| recombination protein RecR [Enterococcus faecalis ARO1/DG]
gi|257161980|gb|EEU91940.1| recombination protein recR [Enterococcus faecalis T11]
gi|257163449|gb|EEU93409.1| recombination protein recR [Enterococcus faecalis X98]
gi|291078082|gb|EFE15446.1| recombination protein RecR [Enterococcus faecalis R712]
gi|291083766|gb|EFE20729.1| recombination protein RecR [Enterococcus faecalis S613]
gi|294453203|gb|EFG21617.1| recombination protein RecR [Enterococcus faecalis PC1.1]
gi|295113699|emb|CBL32336.1| DNA replication and repair protein RecR [Enterococcus sp. 7L76]
gi|300849204|gb|EFK76954.1| recombination protein RecR [Enterococcus faecalis TUSoD Ef11]
gi|306498652|gb|EFM68153.1| recombination protein RecR [Enterococcus faecalis TX0411]
gi|306500371|gb|EFM69707.1| recombination protein RecR [Enterococcus faecalis TX0109]
gi|306504634|gb|EFM73836.1| recombination protein RecR [Enterococcus faecalis TX0860]
gi|306506424|gb|EFM75584.1| recombination protein RecR [Enterococcus faecalis TX2134]
gi|306511694|gb|EFM80693.1| recombination protein RecR [Enterococcus faecalis TX0855]
gi|306514425|gb|EFM82986.1| recombination protein RecR [Enterococcus faecalis TX4248]
gi|310627602|gb|EFQ10885.1| recombination protein RecR [Enterococcus faecalis DAPTO 512]
gi|310630128|gb|EFQ13411.1| recombination protein RecR [Enterococcus faecalis TX0102]
gi|311287765|gb|EFQ66321.1| recombination protein RecR [Enterococcus faecalis DAPTO 516]
gi|311292759|gb|EFQ71315.1| recombination protein RecR [Enterococcus faecalis TX0470]
gi|315025469|gb|EFT37401.1| recombination protein RecR [Enterococcus faecalis TX2137]
gi|315035136|gb|EFT47068.1| recombination protein RecR [Enterococcus faecalis TX0027]
gi|315143842|gb|EFT87858.1| recombination protein RecR [Enterococcus faecalis TX2141]
gi|315148726|gb|EFT92742.1| recombination protein RecR [Enterococcus faecalis TX4244]
gi|315151799|gb|EFT95815.1| recombination protein RecR [Enterococcus faecalis TX0012]
gi|315154272|gb|EFT98288.1| recombination protein RecR [Enterococcus faecalis TX0031]
gi|315155625|gb|EFT99641.1| recombination protein RecR [Enterococcus faecalis TX0043]
gi|315159636|gb|EFU03653.1| recombination protein RecR [Enterococcus faecalis TX0312]
gi|315162071|gb|EFU06088.1| recombination protein RecR [Enterococcus faecalis TX0645]
gi|315165332|gb|EFU09349.1| recombination protein RecR [Enterococcus faecalis TX1302]
gi|315168746|gb|EFU12763.1| recombination protein RecR [Enterococcus faecalis TX1341]
gi|315170438|gb|EFU14455.1| recombination protein RecR [Enterococcus faecalis TX1342]
gi|315173505|gb|EFU17522.1| recombination protein RecR [Enterococcus faecalis TX1346]
gi|315579602|gb|EFU91793.1| recombination protein RecR [Enterococcus faecalis TX0630]
gi|323481687|gb|ADX81126.1| recombination protein RecR [Enterococcus faecalis 62]
gi|327535979|gb|AEA94813.1| recombination protein R [Enterococcus faecalis OG1RF]
Length = 198
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN
Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEITLLKAVEGRREI 198
>gi|306821329|ref|ZP_07454938.1| recombination protein R [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550616|gb|EFM38598.1| recombination protein R [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 200
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K IENLI+ L+++PG G ++A+R H++ +++ L+ ++ K+ CSIC N
Sbjct: 4 FSKPIENLIRQLSKLPGIGQKTAQRLAFHIINMEDEDAKALSSSILEAKEKIQFCSICQN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ ++PC IC +R VI VVE ++ A+E+SK N YHVL G++SP + I P+ +
Sbjct: 64 IADSNPCEICSSTERSGEVICVVESPREVIAMEKSKEFNGKYHVLHGTISPSNSITPDML 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ER+ I+E+I A + TI+G+ TA YI LK +KITR+A G+PMG++++Y
Sbjct: 124 KIRELVERLASDDIKEVILATNPTIDGEATAMYIARLLKPFGIKITRIARGLPMGADIEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ TI +A+ +R +
Sbjct: 184 ADEVTITKALENRVEI 199
>gi|229819048|ref|YP_002880574.1| recombination protein RecR [Beutenbergia cavernae DSM 12333]
gi|229564961|gb|ACQ78812.1| recombination protein RecR [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H++ +G LA A+ + +V C CG
Sbjct: 1 MYEGAVQDLITELGRLPGVGPKSAQRIAFHVLAADPDDVGRLAHALTEVKARVRFCETCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC+D +R+A+++ VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D
Sbjct: 61 NVSEEAQCRICLDPRRNAAILCVVEEPKDVVAIERTREFRGRYHVLGGAINPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++ E+I A +EG+ TA Y+ L G+ + ++RLA G+P+G +L+
Sbjct: 121 LRIRELMTRLADGQVTEVIIATDPNVEGEATATYLARMLAGMGITVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +
Sbjct: 181 YADEITLGRAFEGRRRI 197
>gi|218514436|ref|ZP_03511276.1| recombination protein RecR [Rhizobium etli 8C-3]
Length = 201
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 138/201 (68%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++ATIEGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATIEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|260893958|ref|YP_003240055.1| recombination protein RecR [Ammonifex degensii KC4]
gi|260866099|gb|ACX53205.1| recombination protein RecR [Ammonifex degensii KC4]
Length = 198
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ L R+PG G R+A+R +L+ + LAEA+ K CS+CGN
Sbjct: 3 YPRPLARLIEELKRLPGIGSRTAQRLAFYLLSAPPEEALRLAEAIKEAREKTFYCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DPC+IC D +RD +I VVE D+ A+ER+ +YHVL G LSPLD +GP+ +
Sbjct: 63 FTDIDPCSICSDARRDKGIICVVEMPRDVVAIERAGCFKGVYHVLHGVLSPLDGVGPDKL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
IQ L++R++ ++RE+I A S+T EG+ TA Y+ LK ++VK++RLAYG+P+G+E++
Sbjct: 123 RIQELLQRLQEGEVREVILATSSTTEGEATALYLKRLLKPLEVKVSRLAYGLPVGAEIEL 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ TI A+ R +
Sbjct: 183 ADEETISRALEGRREI 198
>gi|283796872|ref|ZP_06346025.1| recombination protein RecR [Clostridium sp. M62/1]
gi|291075278|gb|EFE12642.1| recombination protein RecR [Clostridium sp. M62/1]
gi|295089889|emb|CBK75996.1| recombination protein RecR [Clostridium cf. saccharolyticum K10]
Length = 199
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G +SA+R H++ + + L+ A+ + V C C
Sbjct: 2 DYYSSQITKLIEELSKLPGIGSKSAQRLAFHIINMPAEQVERLSSAITDAKKNVRYCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +RD +I+VVE+ DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 FTLTDKELCPICESARRDHGIIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R++ +++RE+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIKLKELMTRLQKEEVREVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 182 EYIDEVTLLRALEGRTEL 199
>gi|86738985|ref|YP_479385.1| recombination protein RecR [Frankia sp. CcI3]
gi|123751565|sp|Q2JGD6|RECR_FRASC RecName: Full=Recombination protein recR
gi|86565847|gb|ABD09656.1| DNA replication and repair protein RecR [Frankia sp. CcI3]
Length = 199
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 117/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + LA A+ + KV C C
Sbjct: 1 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLAADPVDVRRLATALTEVKEKVQFCRSCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +RD S I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 61 NVAQSELCRICSDPRRDPSSICVVEEPKDVVAIERTREFRGRYHVLGGAINPIGGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A EG+ TA Y+ ++ + +K+TRLA G+PMG +L+
Sbjct: 121 LHIRELVARLADGTVTELILATDPNTEGEVTASYLARQIAPMGLKVTRLASGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D+ T+ A R V
Sbjct: 181 WADEVTLGRAFEGRRV 196
>gi|295395501|ref|ZP_06805696.1| recombination protein R [Brevibacterium mcbrellneri ATCC 49030]
gi|294971672|gb|EFG47552.1| recombination protein R [Brevibacterium mcbrellneri ATCC 49030]
Length = 204
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 122/198 (61%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
I + +L+ L ++PG GP+SA+R H+++ Q + LA A+ + +V C I
Sbjct: 2 SAIYDGALADLVDELGKLPGIGPKSAQRLAFHILQSPAQQVEQLASALTEVKRRVNFCEI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGNV + CAIC D +RD SVI VVE+ D+ A+ER++ LYHVLGG++ P+ IGP
Sbjct: 62 CGNVAEGEKCAICQDTRRDQSVICVVEEAKDVVAIERTREYRGLYHVLGGAIDPMAGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + I+ L+ R++ ++E + A +EG+ TA Y++ L + V +++LA G+P+G +
Sbjct: 122 DQLRIKQLLTRLQTGDVKECVIATDPNLEGEATATYVIRLLSTVGVNVSKLASGLPVGGD 181
Query: 183 LDYLDDGTIFEAIRSRTV 200
L+Y D+ T+ A + RT
Sbjct: 182 LEYADEVTLGRAFQGRTQ 199
>gi|271970478|ref|YP_003344674.1| recombination protein RecR [Streptosporangium roseum DSM 43021]
gi|270513653|gb|ACZ91931.1| recombination protein RecR [Streptosporangium roseum DSM 43021]
Length = 199
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L +PG GP+SA+R HL+ + + LA A+ + KV C +CG
Sbjct: 1 MYEGVVQNLIDELGMLPGVGPKSAQRIAFHLLAAEPTDVKRLAHALLEVKEKVRFCRVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD VI VVE+ D+ A+E+++ YHVLGG++SP+D +GP+D
Sbjct: 61 NVAAEEECRICRDVRRDPHVICVVEESKDVVAIEKTREFRGRYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+
Sbjct: 121 LRIRELMTRLADGQVTELILATDPNLEGEATATYLARLVKPMGLKVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 181 YADEVTLGRAFEGRRLL 197
>gi|291543055|emb|CBL16165.1| recombination protein RecR [Ruminococcus bromii L2-63]
Length = 200
Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 119/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ENL++ R+PG G ++A+R +++ + LA A+ + + K+ CS C N+
Sbjct: 8 PLENLVEQFERMPGIGNKTAQRLAYYVLNLSKTEAEQLAGAVMDAHTKIHYCSKCCNLTD 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C +C + RD SVI VVE D A+E + +YHVL GS+SPL+ IGP+++ I+
Sbjct: 68 KDLCPVCANPTRDHSVICVVETPRDATAIENTHEFKGVYHVLHGSISPLNDIGPDNLTIK 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + + E+I A + T+EG TA YI LK + VK+TRLAYGIP+G +L+Y D+
Sbjct: 128 ELLARLNEESVEEVIMATNPTVEGDATALYISKLLKPLGVKVTRLAYGIPVGGDLEYADE 187
Query: 189 GTIFEAIRSRTVL 201
T+ +A+ R +
Sbjct: 188 YTLAKALEGRNEI 200
>gi|152964435|ref|YP_001360219.1| recombination protein RecR [Kineococcus radiotolerans SRS30216]
gi|151358952|gb|ABS01955.1| recombination protein RecR [Kineococcus radiotolerans SRS30216]
Length = 199
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + LA+ + + +KV C +CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLAADAVDVKRLADVLTEVKSKVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C +C D +RDASVI VVE+ D+ A+ER++ YHVLGG++SP++ IGP+D
Sbjct: 61 NVAQERLCRVCRDPRRDASVICVVEESKDVVAIERTREFRGRYHVLGGAISPMEGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ ++ E I A +EG+ TA Y+ LK + +++TRLA G+P+G +L+
Sbjct: 121 LRMRELLARLSDGQVTEAIIATDPNLEGEATATYLARLLKPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R L
Sbjct: 181 YADEVTLGRAFAGRRSL 197
>gi|256045823|ref|ZP_05448699.1| recombination protein RecR [Brucella melitensis bv. 1 str. Rev.1]
gi|256112540|ref|ZP_05453461.1| recombination protein RecR [Brucella melitensis bv. 3 str. Ether]
gi|260563114|ref|ZP_05833600.1| recombination protein recR [Brucella melitensis bv. 1 str. 16M]
gi|265992236|ref|ZP_06104793.1| recombination protein recR [Brucella melitensis bv. 1 str. Rev.1]
gi|265993979|ref|ZP_06106536.1| recombination protein recR [Brucella melitensis bv. 3 str. Ether]
gi|20139475|sp|Q8YEG8|RECR_BRUME RecName: Full=Recombination protein recR
gi|260153130|gb|EEW88222.1| recombination protein recR [Brucella melitensis bv. 1 str. 16M]
gi|262764960|gb|EEZ10881.1| recombination protein recR [Brucella melitensis bv. 3 str. Ether]
gi|263003302|gb|EEZ15595.1| recombination protein recR [Brucella melitensis bv. 1 str. Rev.1]
Length = 201
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|147676388|ref|YP_001210603.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum
SI]
gi|229470332|sp|A5D6B3|RECR_PELTS RecName: Full=Recombination protein recR
gi|146272485|dbj|BAF58234.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum
SI]
Length = 200
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 128/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + LI+ LAR+PG GP++A+R +L+ ++ LA A+ V CS+C
Sbjct: 2 DYYAKPVARLIEQLARLPGIGPKTAQRLAFYLLNAPLEVALNLARAVEEARQAVRYCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN+ TDPC IC D +R ++ VVE D+ ALE+++ LYHVL GS+SP++ IGPE
Sbjct: 62 GNLTDTDPCFICGDDRRRRDLLCVVERPRDVVALEKARVFKGLYHVLHGSISPVEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ L++R+E +RE+I A + T+EG+TTA Y+ +K + V +TR+A+G+P+G++L
Sbjct: 122 QLRIRELLKRLEGGTVREVILATNPTVEGETTALYLAGLIKPLGVSVTRIAHGLPVGADL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +A+ R +
Sbjct: 182 EYADEMTLSKALEGRREM 199
>gi|22299747|ref|NP_682994.1| recombination protein RecR [Thermosynechococcus elongatus BP-1]
gi|34222856|sp|Q8DGV8|RECR_THEEB RecName: Full=Recombination protein recR
gi|22295931|dbj|BAC09756.1| recombination protein [Thermosynechococcus elongatus BP-1]
Length = 202
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ + + LI+ L R+PG GP++A+R LHL+K+ E + LA+A+ +V LCS+
Sbjct: 2 SSVYTRPLARLIEQLQRLPGIGPKTAQRLALHLIKRPEADIQALAQALLEAKQQVGLCSV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C ++ C IC QRD I VV D D+ A+E+++ + YHVLGG +SPL+ I P
Sbjct: 62 CFHLSAEPVCEICASPQRDNHTICVVADSRDVIAIEKTREYHGKYHVLGGLISPLEGITP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
E + IQ LI+R ++ E+I AI+ +IEG+TT Y+ L+ VK+TR+A+G+P+G +
Sbjct: 122 EHLHIQPLIQRASQPQVEEVILAINPSIEGETTTLYVGQLLRPF-VKVTRIAFGLPVGGD 180
Query: 183 LDYLDDGTIFEAIRSRTVL 201
LDY D+ T+ A+ R +
Sbjct: 181 LDYADEMTLARALAGRREI 199
>gi|302872028|ref|YP_003840664.1| recombination protein RecR [Caldicellulosiruptor obsidiansis OB47]
gi|302574887|gb|ADL42678.1| recombination protein RecR [Caldicellulosiruptor obsidiansis OB47]
Length = 199
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ K T I L++ L ++PG G ++A+R +++ K + + LA+A+ + LC
Sbjct: 1 MQNKETS--ISKLVQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKTSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 RVCCNFTEDEVCPICKDEKRDRSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ I+E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLLKRLSDPAIKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 179 GDIEYADEVTILKAIEGRREI 199
>gi|218679359|ref|ZP_03527256.1| recombination protein RecR [Rhizobium etli CIAT 894]
Length = 201
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 136/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|256826614|ref|YP_003150573.1| DNA replication and repair protein RecR [Cryptobacterium curtum DSM
15641]
gi|256582757|gb|ACU93891.1| DNA replication and repair protein RecR [Cryptobacterium curtum DSM
15641]
Length = 198
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ L+ AR+PG GP+SA+R ++ L+ A+ + + V CS C
Sbjct: 2 YSAPSIQTLLDEFARLPGIGPKSAQRMVYWILNSDRASAERLSRAIMEVKDTVHFCSRCF 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC +RD +I VV + D+ +ER+ A +YHVLGG+LSPL+ IGP+
Sbjct: 62 NYAEGDLCEICASPKRDQGIICVVSEPRDIPPIERTAAFMGVYHVLGGALSPLEGIGPDQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ ++ E+I A + +EG+TTA Y+ ++ +++K+TRLA G+P+G +L+
Sbjct: 122 LHINELMRRLSDPQVTEVILATNPNVEGETTASYLARLIRPLNIKVTRLASGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ AI SR V+
Sbjct: 182 FADEVTLSRAIESRRVI 198
>gi|314965632|gb|EFT09731.1| recombination protein RecR [Propionibacterium acnes HL082PA2]
Length = 201
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 117/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC
Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D
Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+
Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGR 194
>gi|315032615|gb|EFT44547.1| recombination protein RecR [Enterococcus faecalis TX0017]
Length = 198
Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN
Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGAGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEITLLKAVEGRREI 198
>gi|23336137|ref|ZP_00121364.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Bifidobacterium longum DJO10A]
gi|23465089|ref|NP_695692.1| recombination protein RecR [Bifidobacterium longum NCC2705]
gi|189440150|ref|YP_001955231.1| recombination protein RecR [Bifidobacterium longum DJO10A]
gi|227545630|ref|ZP_03975679.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622696|ref|ZP_04665727.1| recombination protein recR [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|312133495|ref|YP_004000834.1| recr [Bifidobacterium longum subsp. longum BBMN68]
gi|317483359|ref|ZP_07942351.1| recombination protein RecR [Bifidobacterium sp. 12_1_47BFAA]
gi|322688321|ref|YP_004208055.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
157F]
gi|322690331|ref|YP_004219901.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JCM 1217]
gi|73621468|sp|Q8G6Y1|RECR_BIFLO RecName: Full=Recombination protein recR
gi|229890128|sp|B3DUB4|RECR_BIFLD RecName: Full=Recombination protein recR
gi|23325702|gb|AAN24328.1| recombination protein RecR [Bifidobacterium longum NCC2705]
gi|189428585|gb|ACD98733.1| Recombinational DNA repair protein [Bifidobacterium longum DJO10A]
gi|227213746|gb|EEI81585.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514693|gb|EEQ54560.1| recombination protein recR [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291517613|emb|CBK71229.1| DNA replication and repair protein RecR [Bifidobacterium longum
subsp. longum F8]
gi|311772737|gb|ADQ02225.1| RecR [Bifidobacterium longum subsp. longum BBMN68]
gi|316915176|gb|EFV36606.1| recombination protein RecR [Bifidobacterium sp. 12_1_47BFAA]
gi|320455187|dbj|BAJ65809.1| recombination protein RecR [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320459657|dbj|BAJ70277.1| recombination protein RecR [Bifidobacterium longum subsp. infantis
157F]
Length = 200
Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 125/200 (62%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI R+PG GP+ A+R +++ E LAEA+ + K+ C
Sbjct: 1 MALAYDG-AIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV + PC +C D +RD SVI VVE+ D+ ++ER++ + LYHVLGG+++P+ +
Sbjct: 60 DICGNVCESSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYHGLYHVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L++R+E +++E+I A+ IEG+ T Y+ L+ + VK+TRLA G+P+G
Sbjct: 120 GPADLRIPGLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
S+L+Y D+ T+ A+ R
Sbjct: 180 SDLEYADEITLGRALAGRRE 199
>gi|257783927|ref|YP_003179144.1| recombination protein RecR [Atopobium parvulum DSM 20469]
gi|257472434|gb|ACV50553.1| recombination protein RecR [Atopobium parvulum DSM 20469]
Length = 203
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 122/194 (62%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ ++ L+ L R+PG GP+SA+R HL++ + LA+ + + +V C IC N
Sbjct: 9 GRALQRLLDELGRLPGIGPKSAQRIAYHLLEVDSEEARRLAQVILELKQQVHFCPICFNY 68
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T + C IC+D RD S I VV + D+ A+ER+ A + LYHVLGG +SP+D+IGPE +
Sbjct: 69 ATRNECDICLDSSRDRSKICVVSEPKDVSAIERTGAFHGLYHVLGGVISPMDKIGPEQLH 128
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ R+ + E++ A + +EG+TTA Y+ + + V++TRLA G+P+G +L+Y
Sbjct: 129 VRELLSRLADGTVTEVVLATNPDVEGETTATYLSRTINPLGVRVTRLASGLPVGGDLEYA 188
Query: 187 DDGTIFEAIRSRTV 200
D+ T+ AI +R
Sbjct: 189 DEVTLGRAIEARRE 202
>gi|146296606|ref|YP_001180377.1| recombination protein RecR [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|172046023|sp|A4XJV1|RECR_CALS8 RecName: Full=Recombination protein recR
gi|145410182|gb|ABP67186.1| DNA replication and repair protein RecR [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 199
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ K I LI+ L ++PG G ++A+R +++ K + + LAEA+ + N LC
Sbjct: 1 MQAK--ENAISKLIQQLEKLPGIGQKTAQRLAFYIINMKNEDVKALAEAILSAKNSTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
IC N D C IC D +RD S+I VVE+ D+ ALE+ K LYHVL G++SPL
Sbjct: 59 KICCNFTEGDICHICSDDKRDRSIICVVEEPQDVVALEKVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ ++E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLLKRLADTNVKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 179 GDIEYADEVTILKAIEGRKEI 199
>gi|239916819|ref|YP_002956377.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC
2665]
gi|281414721|ref|ZP_06246463.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC
2665]
gi|289706014|ref|ZP_06502387.1| recombination protein RecR [Micrococcus luteus SK58]
gi|239838026|gb|ACS29823.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC
2665]
gi|289557216|gb|EFD50534.1| recombination protein RecR [Micrococcus luteus SK58]
Length = 199
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 128/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H+++ + + LA+A+ + ++V LCS+C
Sbjct: 1 MYQGAVQDLIDELGRLPGIGPKSAQRIAFHMLEADREDMLRLADAIRTVKDRVRLCSVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C++C D++RD S I VVE+ D+ A+ER++A YHVLGG+++P+ IGPE
Sbjct: 61 NVSEDEVCSLCRDERRDRSQICVVEESQDVMAMERTRAFQGRYHVLGGAINPIAGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R++ + ++E+I A +EG+ TA Y+ L +++TRLA G+P+G +L+
Sbjct: 121 LHVRELLTRLQDEAVQEVILATDPNLEGEATATYLGRLLGATGIRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R ++
Sbjct: 181 YADEVTLGRAFEGRRLI 197
>gi|300867805|ref|ZP_07112448.1| recombination protein RecR [Oscillatoria sp. PCC 6506]
gi|300334222|emb|CBN57620.1| recombination protein RecR [Oscillatoria sp. PCC 6506]
Length = 197
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP++A+R LH++K+ E+ + LA+++ + +V C +C
Sbjct: 1 MYTRPLARLIEQLQRLPGIGPKTAQRLALHILKRPEEEIEALAQSLIDAKEQVGFCEVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + RD+ I VV D D+ A+E+++ YHVLGG +SP+D IGPE
Sbjct: 61 HLSADPVCEICRNPNRDSDTICVVTDSRDVIAIEKTREYIGKYHVLGGVISPMDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ I+E+I AIS ++EG+TT Y+ +K K+TR+A+G+PMG +L+
Sbjct: 121 LNIEQLVRRVSHDDIKEVIIAISPSVEGETTTLYVGRLVKPF-TKVTRIAFGLPMGGDLE 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R +L
Sbjct: 180 YADEVTLARALEGRRLL 196
>gi|332710481|ref|ZP_08430428.1| DNA replication and repair protein RecR [Lyngbya majuscula 3L]
gi|332350812|gb|EGJ30405.1| DNA replication and repair protein RecR [Lyngbya majuscula 3L]
Length = 198
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP++A+R LH++K+ + LA+A+ +V C +C
Sbjct: 2 VYTRPLARLIEELQRLPGVGPKTAQRLALHILKRPTPEVKALAQALVEAKQQVGFCRVCF 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + RD I VV D D+ A+E+++ YHVLGG +SP+D IGPE
Sbjct: 62 HLSAEPVCQICRNSNRDEKTICVVADSRDVIAIEKTREYRGKYHVLGGVISPMDGIGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQ L++R+ K I+E+I AI+ ++EG+TT YI ++ K+TR+A+G+PMG +L+
Sbjct: 122 LHIQQLVQRVSQKTIQEVILAINPSVEGETTTLYIGQLIRPF-TKVTRIAFGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 181 YADEVTLARALEGRREL 197
>gi|253580409|ref|ZP_04857674.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848139|gb|EES76104.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 199
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 121/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI+ L+ +PG G +SA+R H++ + + L ++ V C C
Sbjct: 2 EYYSSHINKLIEQLSHLPGIGAKSAQRLAFHIMNMPKDQVEQLTSSITGARENVQYCKCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +RD SVI+VVE+ DL A E++ + +YHVL G++SP+ IGP+
Sbjct: 62 CTLTDREICPICSNDKRDHSVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ +++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMQRLAKDEVKEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLLRALEGRVEL 199
>gi|229544853|ref|ZP_04433578.1| recombination protein RecR [Enterococcus faecalis TX1322]
gi|256854060|ref|ZP_05559425.1| recombination protein recR [Enterococcus faecalis T8]
gi|229310021|gb|EEN76008.1| recombination protein RecR [Enterococcus faecalis TX1322]
gi|256711003|gb|EEU26046.1| recombination protein recR [Enterococcus faecalis T8]
gi|315030415|gb|EFT42347.1| recombination protein RecR [Enterococcus faecalis TX4000]
Length = 198
Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN
Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPED+
Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDV 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEITLLKAVEGRREI 198
>gi|312134985|ref|YP_004002323.1| recombination protein recr [Caldicellulosiruptor owensensis OL]
gi|311775036|gb|ADQ04523.1| recombination protein RecR [Caldicellulosiruptor owensensis OL]
Length = 199
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ K T I L++ L ++PG G ++A+R +++ K + + LA+A+ + LC
Sbjct: 1 MQNKETS--ISKLVQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKISTKLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N + C IC D++RD SVI VVE+ D+ ALER K LYHVL G++SPL
Sbjct: 59 KVCCNFTEEEVCPICKDEKRDRSVICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L++R+ I+E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G
Sbjct: 119 YPEQLTIDVLLKRLSDPAIKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+++Y D+ TI +AI R +
Sbjct: 179 GDIEYADEVTILKAIEGRREI 199
>gi|154486524|ref|ZP_02027931.1| hypothetical protein BIFADO_00339 [Bifidobacterium adolescentis
L2-32]
gi|154084387|gb|EDN83432.1| hypothetical protein BIFADO_00339 [Bifidobacterium adolescentis
L2-32]
Length = 200
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 122/200 (61%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PC +C+D +RD SVI VVE+ D+ ++ER++ +YHVLGG ++P+ +
Sbjct: 60 DICGNVCETSPCPVCVDPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G
Sbjct: 120 QPSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A+ R
Sbjct: 180 GDLEYADEITLGRALAGRRA 199
>gi|29377240|ref|NP_816394.1| recombination protein RecR [Enterococcus faecalis V583]
gi|227554248|ref|ZP_03984295.1| recombination protein RecR [Enterococcus faecalis HH22]
gi|73621483|sp|Q830L4|RECR_ENTFA RecName: Full=Recombination protein recR
gi|29344706|gb|AAO82464.1| recombination protein RecR [Enterococcus faecalis V583]
gi|227176608|gb|EEI57580.1| recombination protein RecR [Enterococcus faecalis HH22]
gi|315573803|gb|EFU85994.1| recombination protein RecR [Enterococcus faecalis TX0309B]
gi|315580315|gb|EFU92506.1| recombination protein RecR [Enterococcus faecalis TX0309A]
Length = 198
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN
Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S+I+VVE+ D+ ++E+ + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMSMEKMREYQGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEITLLKAVEGRREI 198
>gi|332671907|ref|YP_004454915.1| recombination protein RecR [Cellulomonas fimi ATCC 484]
gi|332340945|gb|AEE47528.1| recombination protein RecR [Cellulomonas fimi ATCC 484]
Length = 199
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H++ + L++A+ + +V C +CG
Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHILAADPADVRRLSDALVEVKRRVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV D C IC D +R + + VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 61 NVAQEDQCRICRDPRRSPATLCVVEEPKDVVAIERTREFRGRYHVLGGAINPIAGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ + E+I A +EG+ TA Y+ L + + ++RLA G+P+G +L+
Sbjct: 121 LRIAQLMTRLADGVVTEVILATDPNVEGEATATYLARLLVPMGLTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +
Sbjct: 181 YADEVTLGRAFEGRRRI 197
>gi|325291537|ref|YP_004277401.1| recombination protein RecR [Agrobacterium sp. H13-3]
gi|325059390|gb|ADY63081.1| recombination protein RecR [Agrobacterium sp. H13-3]
Length = 201
Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats.
Identities = 130/201 (64%), Positives = 163/201 (81%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKKEQLLGPL AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D +RD SVIIVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ LI+R+ IRELI A++AT+EGQ TAHYI D L + +KITRLA+G+P+G
Sbjct: 121 GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDHLADLGIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTTI 201
>gi|210616980|ref|ZP_03291315.1| hypothetical protein CLONEX_03537 [Clostridium nexile DSM 1787]
gi|210149503|gb|EEA80512.1| hypothetical protein CLONEX_03537 [Clostridium nexile DSM 1787]
Length = 198
Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+R+PG G +SA+R H++ ++ + LA +M V C C
Sbjct: 2 DYYSSQISKLIEELSRLPGIGAKSAQRLAFHIINMPKEQVQSLAGSMTEARENVRYCKQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + RDA I+VVE DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 HTLTDQELCPICSNSNRDAKTIMVVETTRDLAAYEKTGKYQGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT +
Sbjct: 181 EYIDEVTLLRALEGRTEI 198
>gi|311743400|ref|ZP_07717207.1| recombination protein R [Aeromicrobium marinum DSM 15272]
gi|311313468|gb|EFQ83378.1| recombination protein R [Aeromicrobium marinum DSM 15272]
Length = 204
Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R HL+ + + A + + V C+ CG
Sbjct: 1 MYDSVIQDLIDELGRLPGIGPKSAQRIAFHLLDADPEDVRRFASVLTEVKATVHFCATCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RDA+V+ VVE+ D+ A+ER++ YHVLGG++SP+ IGP+
Sbjct: 61 NVTVDPECRICADPRRDATVLCVVEESKDVVAIERTREFRGRYHVLGGAISPIAGIGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R++ + E+I A +EG+ TA Y++ L + V +++LA G+P+G +L+
Sbjct: 121 LRIKELLGRLQDGVVTEVIIATDPNLEGEATATYLIRMLSTLGVAVSKLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A RT +
Sbjct: 181 YADELTLGRAFEGRTSI 197
>gi|258513458|ref|YP_003189680.1| recombination protein RecR [Desulfotomaculum acetoxidans DSM 771]
gi|257777163|gb|ACV61057.1| recombination protein RecR [Desulfotomaculum acetoxidans DSM 771]
Length = 199
Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI + +PG GP++A+R +L+ E++ LAEA+ + + CS+C N+
Sbjct: 8 VSRLINEFSLLPGVGPKTAQRIAFYLLNAPEEVAHRLAEAVREARDNIKYCSVCSNLTDV 67
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC IC D +R ++I +V++ D+ A+E+S+ LYHVL G++SP+D IGPE++ I+
Sbjct: 68 DPCLICSDNKRSKNIICIVQEPRDVIAMEKSRGFKGLYHVLHGAISPMDGIGPENLRIKE 127
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ +K+ ELI A + +EG TA Y+ +K + +K+TR+A+G+P+G+ L+Y D
Sbjct: 128 LLSRLHKEKVGELILATNPNVEGDATAFYLARLIKPLGIKVTRIAHGLPVGACLEYADGV 187
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R +
Sbjct: 188 TLTKALEGRQEI 199
>gi|256398117|ref|YP_003119681.1| recombination protein RecR [Catenulispora acidiphila DSM 44928]
gi|256364343|gb|ACU77840.1| recombination protein RecR [Catenulispora acidiphila DSM 44928]
Length = 199
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L +P GP+SA+R HL++ + LAE + +V C++C
Sbjct: 1 MYEGVVQDLIDELGHLPNIGPKSAQRIAFHLLQADPADVRRLAEVLIRAKEQVRFCAVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RD S + VVE+ D+ A+E+++ YHVLGG++SP+D +GP+D
Sbjct: 61 NVAEQQECKICRDPRRDPSSLCVVEESKDVVAVEKTREFRGRYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L++R+ I E+I A +EG+ TA Y+ +K + +++TRLA G+P+G +L+
Sbjct: 121 LRVKELLKRLADGVITEVILATDPNLEGEATATYLARLIKPLGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R L
Sbjct: 181 YADEVTLGRAFEGRRQL 197
>gi|312902588|ref|ZP_07761794.1| recombination protein RecR [Enterococcus faecalis TX0635]
gi|310634258|gb|EFQ17541.1| recombination protein RecR [Enterococcus faecalis TX0635]
Length = 198
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN
Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI
Sbjct: 63 IAEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEITLLKAVEGRREI 198
>gi|269793813|ref|YP_003313268.1| DNA replication and repair protein RecR [Sanguibacter keddieii DSM
10542]
gi|269095998|gb|ACZ20434.1| DNA replication and repair protein RecR [Sanguibacter keddieii DSM
10542]
Length = 199
Score = 299 bits (768), Expect = 9e-80, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 123/196 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + LAEA+ + KV C ICG
Sbjct: 1 MYEGAVQDLIDELGRLPGIGPKSAQRIAFHLLAADAEDARRLAEALTEVKLKVRFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +R +VI VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D
Sbjct: 61 NVAESEQCRICQDPRRSVAVICVVEEAKDVVAIERTREFRGKYHVLGGAINPIDNVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++E+I A+ +EG+ TA Y+ L + +++TRLA G+P+G +L+
Sbjct: 121 LRIKELLTRLADGAVQEVILAMDPNVEGEATATYLARMLGPMGLRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R V
Sbjct: 181 YADEVTLGRAFEGRRV 196
>gi|296130955|ref|YP_003638205.1| recombination protein RecR [Cellulomonas flavigena DSM 20109]
gi|296022770|gb|ADG76006.1| recombination protein RecR [Cellulomonas flavigena DSM 20109]
Length = 199
Score = 299 bits (768), Expect = 9e-80, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++L+ L R+PG GP+SA+R H++ + LA+A+ + +V C +CG
Sbjct: 1 MYEGAIQDLVDELGRLPGVGPKSAQRIAFHILAADPADVRRLADALTEVKARVQFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +R + I VVE+ D+ A+ER++ YHVLGG+++P+ IGP+D
Sbjct: 61 NVAQEPQCRICRDPRRLPTTICVVEEAKDVVAIERTREFRGRYHVLGGAINPIAGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ + E+I A +EG+ TA Y+ L + + ++RLA G+P+G +L+
Sbjct: 121 LRIAQLMTRLADGTVTEVILATDPNVEGEATATYLARLLVPMGLTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R L
Sbjct: 181 YADEVTLGRAFEGRRRL 197
>gi|313835779|gb|EFS73493.1| recombination protein RecR [Propionibacterium acnes HL037PA2]
gi|314928454|gb|EFS92285.1| recombination protein RecR [Propionibacterium acnes HL044PA1]
gi|314970148|gb|EFT14246.1| recombination protein RecR [Propionibacterium acnes HL037PA3]
gi|328906729|gb|EGG26501.1| putative recombination protein RecR [Propionibacterium sp. P08]
Length = 201
Score = 299 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 117/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP+ A+R H++ + + LA+A+ + K C +C
Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPTEEINELADALREVKEKAKFCKVCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG +SPLD GP D
Sbjct: 61 NVSSDEVCQYCRDPRRDRSMICVVEESKDVIAVERTRQFRGLYHVLGGVISPLDGKGPAD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+
Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIGPMGVTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGR 194
>gi|15887447|ref|NP_353128.1| recombination protein RecR [Agrobacterium tumefaciens str. C58]
gi|21759386|sp|Q8UJ45|RECR_AGRT5 RecName: Full=Recombination protein recR
gi|15154962|gb|AAK85913.1| Recombination protein [Agrobacterium tumefaciens str. C58]
Length = 201
Score = 299 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 131/201 (65%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKKEQLLGPL AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D +RD SVIIVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ LI+R+ IRELI A++AT+EGQ TAHYI D+L G+ +KITRLA+G+P+G
Sbjct: 121 GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDRLSGLGIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTTI 201
>gi|153854736|ref|ZP_01995970.1| hypothetical protein DORLON_01968 [Dorea longicatena DSM 13814]
gi|149752643|gb|EDM62574.1| hypothetical protein DORLON_01968 [Dorea longicatena DSM 13814]
Length = 198
Score = 299 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ LI+ L+ +PG G +SA R HL+ + LA M + C C
Sbjct: 2 DYYSNQMSKLIEELSCLPGIGAKSAARLAFHLIHMPVDDVKRLASTMVEARENIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGPE
Sbjct: 62 YTLTDQELCPICSNSNRDHQTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LIER+ ++E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELIERL-QGDVKEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|153815988|ref|ZP_01968656.1| hypothetical protein RUMTOR_02233 [Ruminococcus torques ATCC 27756]
gi|317500928|ref|ZP_07959138.1| recombination protein RecR [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089172|ref|ZP_08338075.1| recombination protein recR [Lachnospiraceae bacterium 3_1_46FAA]
gi|145846635|gb|EDK23553.1| hypothetical protein RUMTOR_02233 [Ruminococcus torques ATCC 27756]
gi|316897631|gb|EFV19692.1| recombination protein RecR [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405949|gb|EGG85475.1| recombination protein recR [Lachnospiraceae bacterium 3_1_46FAA]
Length = 198
Score = 299 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ +I LI+ +R+PG G +SA+R H++ + LA+++ + V C +C
Sbjct: 2 EYYSNQISRLIEEFSRLPGIGSKSAQRLAFHVINMPLDQVEGLAKSIIDARKNVRYCKVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDRETCPICGNPDRDKKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRLKELMERL-QGDVNEVIIATNSSLEGETTAMYISKLIKPAGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|172048304|sp|A5VMY2|RECR_BRUO2 RecName: Full=Recombination protein recR
Length = 201
Score = 299 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++R + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRAPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|229917434|ref|YP_002886080.1| recombination protein RecR [Exiguobacterium sp. AT1b]
gi|259563696|sp|C4KZX2|RECR_EXISA RecName: Full=Recombination protein recR
gi|229468863|gb|ACQ70635.1| recombination protein RecR [Exiguobacterium sp. AT1b]
Length = 199
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG GP++A R H++ +E + A+++ + + C++CG+
Sbjct: 3 YPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC D RD +V+ VV+D D+ A+E+ + YHVL G++SP++ IGPEDI
Sbjct: 63 ITDIDPCAICKDSHRDETVVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ SL+ R++ + I+E+I A + IEG+ T+ Y+ LK +++TRLA+G+P+G +L+
Sbjct: 123 NVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRLLKPTGIRVTRLAHGLPVGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 183 YADEVTLSRAMEGRREL 199
>gi|311112887|ref|YP_003984109.1| recombination protein R [Rothia dentocariosa ATCC 17931]
gi|310944381|gb|ADP40675.1| recombination protein R [Rothia dentocariosa ATCC 17931]
Length = 379
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R +++ + L A++ + + V C ICG
Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFYILNSDASDMARLTNAISKVKSSVSFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV T C IC D +RD +I VVE+ D+ A+ER+++ YHVLGG+++PL +GPE
Sbjct: 61 NVSETKQCVICRDDRRDPGLICVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGLGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + ++++RLA G+P+G +L+
Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGIRLSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R V+
Sbjct: 181 YADEITLGRALEGRRVI 197
>gi|293567581|ref|ZP_06678925.1| recombination protein RecR [Enterococcus faecium E1071]
gi|291589682|gb|EFF21486.1| recombination protein RecR [Enterococcus faecium E1071]
Length = 198
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN
Sbjct: 3 YPEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEEDPCEICRNLSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLLKAVEGRREL 198
>gi|212717035|ref|ZP_03325163.1| hypothetical protein BIFCAT_01982 [Bifidobacterium catenulatum DSM
16992]
gi|212660023|gb|EEB20598.1| hypothetical protein BIFCAT_01982 [Bifidobacterium catenulatum DSM
16992]
Length = 201
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + K+ C
Sbjct: 1 MALAYDG-AIQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLVDAITEVKEKIRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PC IC+D +RD SVI VVE+ D+ ++ER++ LYHVLGG ++P+ +
Sbjct: 60 DICGNVCETSPCPICVDPRRDHSVICVVEEPKDVMSIERTREYRGLYHVLGGVINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I LIER++ ++ E+I A++ +EG+ T ++ L D+ +TRLA G+P+G
Sbjct: 120 QPSDLNIAKLIERLKDSEVTEVILALNPNVEGEATTSFLSQLLSQTDITVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A+ R
Sbjct: 180 GDLEYADEITLGRALAGRRA 199
>gi|116249898|ref|YP_765736.1| recombination protein RecR [Rhizobium leguminosarum bv. viciae
3841]
gi|123082100|sp|Q1MN32|RECR_RHIL3 RecName: Full=Recombination protein recR
gi|115254546|emb|CAK05620.1| putative recombination protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 201
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 135/201 (67%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|323136738|ref|ZP_08071819.1| recombination protein RecR [Methylocystis sp. ATCC 49242]
gi|322398055|gb|EFY00576.1| recombination protein RecR [Methylocystis sp. ATCC 49242]
Length = 201
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 116/201 (57%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +++ G EIE L+++LAR+PG GPRSARRA LHL++K+E+LL PL++AM ++ C
Sbjct: 1 MAERVAGPEIERLVQLLARLPGLGPRSARRAALHLIRKREELLAPLSDAMRVAQERIVSC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT+DPC IC D +RD S+++VVE VADLWALER+ +NA YHVLGG LSPLD +
Sbjct: 61 SVCGNIDTSDPCTICRDARRDPSILVVVETVADLWALERAGLLNARYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I SLIER+ +IRE++ A++AT++GQTTAHYI D L VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIASLIERVRAGEIREIVLAVNATVDGQTTAHYIADLLSPFGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+ RT
Sbjct: 181 GELDYLDEGTLAAALERRTSF 201
>gi|49475042|ref|YP_033083.1| recombination protein RecR [Bartonella henselae str. Houston-1]
gi|73621465|sp|Q6G4V2|RECR_BARHE RecName: Full=Recombination protein recR
gi|49237847|emb|CAF27042.1| Recombination protein recR [Bartonella henselae str. Houston-1]
Length = 201
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ KVC+C
Sbjct: 1 MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLEPLGAAIQAAVQKVCIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTIDPCSICTDPRRDDATIIVVEDIADLWALERAKTLAARYHVLGGKLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I LI+R+ I E+I A++AT+EGQTTAHYI D+L VK+TRLA+G+P+G
Sbjct: 121 GPDELNIAPLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFSVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAALQARTNL 201
>gi|323359077|ref|YP_004225473.1| recombinational DNA repair protein [Microbacterium testaceum
StLB037]
gi|323275448|dbj|BAJ75593.1| recombinational DNA repair protein [Microbacterium testaceum
StLB037]
Length = 197
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 124/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI R+PG GP+SA+R H+++ + L+ + I +KV C ICGNV
Sbjct: 6 VQDLIDEFGRLPGIGPKSAQRIAFHILQSPSFDVSRLSTLLGEIRDKVKFCEICGNVTEQ 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +R+A++I VVED D+ A+ER++ LYHVLGG++SP+ IGP+D+ +
Sbjct: 66 ERCSICRDPRRNATLICVVEDAKDVAAIERTREFRGLYHVLGGAISPIAGIGPDDLRVTQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R+ ++E+I A + +EG+ TA Y+ L +++++TRLA G+P+G +L+Y D+
Sbjct: 126 LMQRLADGTVQEVILATNPNLEGEATATYLSRLLHTLEIRVTRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 186 TLGRAFEGRRTL 197
>gi|49473884|ref|YP_031926.1| recombination protein RecR [Bartonella quintana str. Toulouse]
gi|73621466|sp|Q6G0M8|RECR_BARQU RecName: Full=Recombination protein recR
gi|49239387|emb|CAF25721.1| Recombination protein recR [Bartonella quintana str. Toulouse]
Length = 201
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 129/201 (64%), Positives = 161/201 (80%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LARIPGFGPRSARRA L+L+KKKE LL PL A+ +KVC+C
Sbjct: 1 MSKHIAGPEIERLIQLLARIPGFGPRSARRAALYLIKKKETLLEPLGAAIQAAVDKVCIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDTTDPC+IC D +RD + IIVVEDVADLWALER++ + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTTDPCSICRDPRRDDTTIIVVEDVADLWALERARTLAARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SL++R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNITSLVQRVVQNPIMEIILAVNATVEGQTTAHYITDQLSNFSVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAALQARTNL 201
>gi|291455831|ref|ZP_06595221.1| recombination protein RecR [Bifidobacterium breve DSM 20213]
gi|291382759|gb|EFE90277.1| recombination protein RecR [Bifidobacterium breve DSM 20213]
Length = 200
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI +PG GP+ A+R +++ E LAEA+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDAFGHLPGIGPKGAQRIAFYMLSAPEDEARELAEAIEEVKAKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ +
Sbjct: 60 EICGNVCETSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L++R+E +++E+I A+ IEG+ T Y+ L+ + VKITRLA G+P+G
Sbjct: 120 GPADLRIPGLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKITRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
S+L+Y D+ T+ A+ R
Sbjct: 180 SDLEYADEITLGRALAGRRE 199
>gi|291545136|emb|CBL18245.1| recombination protein RecR [Ruminococcus sp. 18P13]
Length = 200
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 121/189 (64%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A++PG G ++A+R +++ E + A+A+ ++V C+IC N+ + C
Sbjct: 12 LAEQFAKLPGIGMKTAQRLAYYVMSMSESDVQAFADAILQAKHRVHNCAICQNLTEQEVC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD S+I VVE D+ A ER+ N YHVL G +SPLD + P+D+ I+SL+
Sbjct: 72 PICGDDRRDHSIICVVESPKDVTAFERTGEYNGTYHVLHGLISPLDGVSPDDLEIRSLLA 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + + E+I A + T+EG+ TA YI LK + VK++RLA+G+P+G L+Y D+ T++
Sbjct: 132 RLQSEPVTEVIMATNPTVEGEATAMYIARLLKPMGVKVSRLAFGLPIGGILEYADEVTLY 191
Query: 193 EAIRSRTVL 201
+A+ +R +
Sbjct: 192 KALENRNEI 200
>gi|327329178|gb|EGE70938.1| recombination protein RecR [Propionibacterium acnes HL103PA1]
Length = 201
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 116/194 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC
Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D
Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L +R+ + + E+I A + +EG+ TA Y+ + + ++RLA G+P+G +L+
Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGATVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGR 194
>gi|225387322|ref|ZP_03757086.1| hypothetical protein CLOSTASPAR_01074 [Clostridium asparagiforme
DSM 15981]
gi|225046571|gb|EEG56817.1| hypothetical protein CLOSTASPAR_01074 [Clostridium asparagiforme
DSM 15981]
Length = 198
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G +SA+R H++ + + LA +M + N V C C
Sbjct: 2 DYYSSQITKLIEELSKLPGVGAKSAQRLAFHIINMPREQVDELARSMTDAKNNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDRELCPICSSDKRNHKEIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R++ + E+I A ++++EG+TTA YI +K VK+TR+A G+P+G +L
Sbjct: 122 DIKLKELMQRLQS-DVEEVIIATNSSLEGETTAMYISKLIKPTGVKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|15963986|ref|NP_384339.1| recombination protein RecR [Sinorhizobium meliloti 1021]
gi|307306398|ref|ZP_07586142.1| recombination protein RecR [Sinorhizobium meliloti BL225C]
gi|307319285|ref|ZP_07598714.1| recombination protein RecR [Sinorhizobium meliloti AK83]
gi|20139570|sp|Q92SW9|RECR_RHIME RecName: Full=Recombination protein recR
gi|15073162|emb|CAC41670.1| Probable recombination protein [Sinorhizobium meliloti 1021]
gi|306895121|gb|EFN25878.1| recombination protein RecR [Sinorhizobium meliloti AK83]
gi|306902240|gb|EFN32837.1| recombination protein RecR [Sinorhizobium meliloti BL225C]
Length = 201
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 136/201 (67%), Positives = 172/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD +VIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SCCGNVDTIDPCTVCTDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ LI+R+ +RELI A++AT+EGQTTAHYI D+L+G++V+ITRLA+G+P+G
Sbjct: 121 GPEDLNIRGLIDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|225851575|ref|YP_002731808.1| recombination protein RecR [Brucella melitensis ATCC 23457]
gi|256264913|ref|ZP_05467445.1| recombination protein recR [Brucella melitensis bv. 2 str. 63/9]
gi|254790756|sp|C0RG96|RECR_BRUMB RecName: Full=Recombination protein recR
gi|225639940|gb|ACN99853.1| recombination protein RecR [Brucella melitensis ATCC 23457]
gi|263095398|gb|EEZ18999.1| recombination protein recR [Brucella melitensis bv. 2 str. 63/9]
gi|326408044|gb|ADZ65109.1| recombination protein RecR [Brucella melitensis M28]
gi|326537761|gb|ADZ85976.1| recombination protein RecR [Brucella melitensis M5-90]
Length = 201
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I
Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L D+++TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDMRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT L
Sbjct: 181 GELDYLDEGTLAAALRARTTL 201
>gi|89094007|ref|ZP_01166951.1| recombination protein RecR [Oceanospirillum sp. MED92]
gi|89081681|gb|EAR60909.1| recombination protein RecR [Oceanospirillum sp. MED92]
Length = 199
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 125/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+ LI L +PG GP+SA+R HL+++ LAEA+ +++ C +C
Sbjct: 3 FSPLIQQLITSLRCLPGVGPKSAQRMAFHLLERDPDGALALAEALQKSVSEIGHCKLCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T+ C IC RD+SV+ ++E D+ A+E++ N LY VL G LSP+D IGPED+
Sbjct: 63 LSETEICDICSATDRDSSVLCILESPIDVLAVEQTGGFNGLYFVLSGHLSPIDGIGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ER++ I+ELI A + T+EG+ TAHYI ++K + VK++R+A+G+P+G EL++
Sbjct: 123 GIDKLLERVQSSDIKELILATNPTVEGEATAHYIAAQVKDLGVKVSRIAHGVPVGGELEF 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R L
Sbjct: 183 VDGGTLAHALAGRRSL 198
>gi|300744278|ref|ZP_07073297.1| recombination protein RecR [Rothia dentocariosa M567]
gi|300380003|gb|EFJ76567.1| recombination protein RecR [Rothia dentocariosa M567]
Length = 378
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L R+PG GP+SA+R +++ + L A++ + + V C ICG
Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFYILNSDASDMARLTNAISKVKSSVSFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV T C IC D +RD +I VVE+ D+ A+ER+++ YHVLGG+++PL +GPE
Sbjct: 61 NVSETKQCVICRDDRRDPGLICVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGLGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + ++++RLA G+P+G +L+
Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGIRLSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R V+
Sbjct: 181 YADEITLGRALEGRRVI 197
>gi|139438750|ref|ZP_01772234.1| Hypothetical protein COLAER_01237 [Collinsella aerofaciens ATCC
25986]
gi|133775830|gb|EBA39650.1| Hypothetical protein COLAER_01237 [Collinsella aerofaciens ATCC
25986]
Length = 198
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ L+ L R+PG GP+SA+R +L++ + LAEA+ + +V CS C N
Sbjct: 3 ANHSLQKLLDELGRLPGIGPKSAQRIAYYLLEADAEEARRLAEAILEVKQEVHFCSRCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T D C+IC D RD + I VV + D+ A+ER+ + + LYHVLGG +SP+D+IGPE +
Sbjct: 63 YATADECSICQDPMRDTTRICVVGEPRDVQAIERTGSYHGLYHVLGGVISPMDKIGPEQL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ + I E+I A + IEG+TTA Y+ +K + V+++RLA G+P+G +L+Y
Sbjct: 123 HIRELLARLGHEDIHEVIIATNPNIEGETTASYLARTIKPLGVEVSRLASGLPVGGDLEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI +R +
Sbjct: 183 ADELTLGRAIEARRAI 198
>gi|158337044|ref|YP_001518219.1| recombination protein RecR [Acaryochloris marina MBIC11017]
gi|189039775|sp|B0C882|RECR_ACAM1 RecName: Full=Recombination protein recR
gi|158307285|gb|ABW28902.1| recombination protein RecR [Acaryochloris marina MBIC11017]
Length = 200
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + L++ L R+PG GP+SA+R LHL+K+ + LA A+ +V CS+C
Sbjct: 4 VYTRPLARLVEQLQRLPGIGPKSAQRLALHLLKRPTAEVEALANALIEAKQQVGFCSVCF 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC RD +VI VV D D+ ALE+++ YHVLGG +SP+D IGP+
Sbjct: 64 HLSADPVCDICRAPSRDKTVICVVADSRDVIALEKTREFKGQYHVLGGLISPMDGIGPDQ 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ +Q LI R+ K +E+I AI+ ++EG+TT Y+ LK ++TR+A+G+PMG +L+
Sbjct: 124 LNVQPLIRRVHQTKTQEVILAINPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 183 YADEVTLARALEGRRDL 199
>gi|221194896|ref|ZP_03567952.1| recombination protein RecR [Atopobium rimae ATCC 49626]
gi|221184799|gb|EEE17190.1| recombination protein RecR [Atopobium rimae ATCC 49626]
Length = 203
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 122/194 (62%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ ++ L+ L R+PG GP+SA+R +L++ + L+ A+ + +V C IC N
Sbjct: 9 GRALQRLLDELGRLPGIGPKSAQRIAYYLLEADSEEAQRLSRAILEVKQQVHFCPICFNY 68
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T D C +C+D R+ S I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE +
Sbjct: 69 ATRDECDVCMDASRNRSEICVVSEPRDVSAIERTGVYHGLYHVLGGVISPMDKIGPEQLH 128
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L+ R+ ++E++ A + +EG+TTA Y+ + + VK++RLA G+P+G +L+Y
Sbjct: 129 VRELLSRLADGTVQEVLLATNPDVEGETTATYLARTIAPLGVKVSRLASGLPVGGDLEYA 188
Query: 187 DDGTIFEAIRSRTV 200
D+ T+ AI +R
Sbjct: 189 DEVTLGRAIEARRE 202
>gi|315639688|ref|ZP_07894828.1| recombination protein R [Enterococcus italicus DSM 15952]
gi|315484649|gb|EFU75105.1| recombination protein R [Enterococcus italicus DSM 15952]
Length = 198
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 126/196 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI +PG G ++A R H + K++++ A+++ ++ + CSICGN
Sbjct: 3 YPEPIARLIASYMNLPGIGQKTATRLAFHTIDMKDEVVNEFAKSLLSVKRDLQFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE+ D+ A+E+ + + LYHVL G LSP++ GP+DI
Sbjct: 63 ITEEDPCEICADKTRDRSTILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPDDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +LI+R+ ++++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIAALIQRLHNEEVKEVILATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEVTLLKAVEGRREL 198
>gi|159030384|emb|CAO91280.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 203
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 1/199 (0%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
I + LI+ L ++PG GP+SA+R L+++K+ EQ LA+A+ +V LC +
Sbjct: 6 TAIYTPPLARLIEQLQKLPGVGPKSAQRLALYILKRPEQDAIELAQAIVAAKKQVGLCQV 65
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C ++ C IC + R+ I VV D D+ ALE+++ + YHVLGG +SP+D IGP
Sbjct: 66 CFHLSAEPICEICRNPNRETGTICVVADSRDVIALEKTREYSGKYHVLGGVISPMDGIGP 125
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + IQSL+ R+ KKI+E+I AIS ++EG+TT YI LK K+TR+A+G+PMG +
Sbjct: 126 DQLNIQSLVTRVSQKKIQEVILAISPSVEGETTTLYIGGLLKPF-TKVTRIAFGLPMGGD 184
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ R L
Sbjct: 185 LEYADEVTLARALEGRREL 203
>gi|229829734|ref|ZP_04455803.1| hypothetical protein GCWU000342_01831 [Shuttleworthia satelles DSM
14600]
gi|229791723|gb|EEP27837.1| hypothetical protein GCWU000342_01831 [Shuttleworthia satelles DSM
14600]
Length = 199
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 118/198 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ +EI LI L+R+PG G +SA+R H+++ ++ + L +++ + V C C
Sbjct: 2 EYYSREISQLIGALSRLPGIGSKSAQRLAFHILRMPKEEVDQLGKSLMDARANVRFCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +R+ I+VVE DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 FTLTDQEICPICASDRRNHRQIMVVESTRDLAAYEKTGKYEGVYHVLHGAISPMQGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L R++ + + E+I A ++++EG+ TA YI +K +++TR+A G+P+G +L
Sbjct: 122 DIRMKELFVRLQKEDVEEVIIATNSSLEGEATAMYISKLIKPTGIRVTRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLLRALDGRRDL 199
>gi|111220097|ref|YP_710891.1| recombination protein RecR [Frankia alni ACN14a]
gi|122954652|sp|Q0RT19|RECR_FRAAA RecName: Full=Recombination protein recR
gi|111147629|emb|CAJ59284.1| recombination and repair protein [Frankia alni ACN14a]
Length = 199
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 119/196 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + LA A+ + +KV C C
Sbjct: 1 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLAADPVDVRRLATALTEVKDKVRFCRSCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 61 NVAQSELCRICADPRRDQALICVVEEPKDVVAIERTREFRGRYHVLGGAINPIGGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + ELI A EG+ TA Y+ ++ + +++TRLA G+PMG +L+
Sbjct: 121 LHIRELVARLADGTVTELILATDPNTEGEVTASYLARQIGPMGLRVTRLASGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D+ T+ A R V
Sbjct: 181 WADEVTLGRAFEGRRV 196
>gi|227876481|ref|ZP_03994593.1| recombination protein RecR [Mobiluncus mulieris ATCC 35243]
gi|306817440|ref|ZP_07451185.1| recombination protein R [Mobiluncus mulieris ATCC 35239]
gi|307700518|ref|ZP_07637554.1| recombination protein RecR [Mobiluncus mulieris FB024-16]
gi|227843022|gb|EEJ53219.1| recombination protein RecR [Mobiluncus mulieris ATCC 35243]
gi|304649881|gb|EFM47161.1| recombination protein R [Mobiluncus mulieris ATCC 35239]
gi|307614325|gb|EFN93558.1| recombination protein RecR [Mobiluncus mulieris FB024-16]
Length = 201
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 125/199 (62%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+I ++NLI L ++PG GP+SA+R +++ + + LA + + + C
Sbjct: 2 SQIFTDALQNLIDALGKMPGVGPKSAQRIAFWVLQTDPENIKNLAATLQTAKDTIRFCET 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+ C IC+D +RD S+I VVE+ D+ +LE++++ LYHVLGG++ P++ IGP
Sbjct: 62 CGNITENPVCQICVDPRRDRSLICVVEEAKDIASLEKTRSYRGLYHVLGGAIDPINGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + I+SL+ER++ K++E+I A + +EG+ TA Y+ L + + +RLA G+P+GS+
Sbjct: 122 DQLRIKSLMERLQDAKVKEVIIATNPNVEGEATATYLSRLLATLQIPASRLASGLPVGSD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ R L
Sbjct: 182 LEYADEVTLSRALEGRHSL 200
>gi|188584659|ref|YP_001916204.1| DNA replication and repair protein RecR [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|229470330|sp|B2A302|RECR_NATTJ RecName: Full=Recombination protein recR
gi|179349346|gb|ACB83616.1| DNA replication and repair protein RecR [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 199
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I LI+ L+ +PG GP++A R H+V E + L A+ + +KV C
Sbjct: 1 MSN--YPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFEC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N+ DPC IC D+ RD+++I VV+D D+ A+E+ + YHVL G +SP++ I
Sbjct: 59 STCNNLTDKDPCTICQDESRDSNLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ +++L++RI+ + I EL+ A T+EG+ TA Y+ +K + V++TRLAYG+PMG
Sbjct: 119 GPDDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKLVKPLGVRVTRLAYGLPMG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ +A R L
Sbjct: 179 GDLEYADEMTLQQAFEGRKEL 199
>gi|319898352|ref|YP_004158445.1| recombination protein RecR [Bartonella clarridgeiae 73]
gi|319402316|emb|CBI75855.1| recombination protein RecR [Bartonella clarridgeiae 73]
Length = 201
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 130/201 (64%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ NKV +C
Sbjct: 1 MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLEPLGSALQETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+ICID +RD S+IIVVED++DLWALER+K + YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTKDPCSICIDPRRDKSIIIVVEDISDLWALERAKILPTRYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNITSLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+RT L
Sbjct: 181 GELDYLDDGTLAAALRARTNL 201
>gi|325298171|ref|YP_004258088.1| Recombination protein recR [Bacteroides salanitronis DSM 18170]
gi|324317724|gb|ADY35615.1| Recombination protein recR [Bacteroides salanitronis DSM 18170]
Length = 206
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R L+L+++ Q + A+ + ++V C
Sbjct: 1 MNQQYPSALLEKAVDEFAKLPGIGRKTAMRLVLYLLRQDTQAVESFGNALIRLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTDVCQICSNPSRDASTICVVENIRDVMAIENTQQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ + E+I A+S+T+EG TT YI KL +VK+T +A GI +G
Sbjct: 121 GPSDLQIESLVERVKAGTVSEVILALSSTMEGDTTNFYIFRKLAPYNVKLTIIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +R V
Sbjct: 181 DELEYTDEVTLGRSIANRIVF 201
>gi|224283525|ref|ZP_03646847.1| recombination protein RecR [Bifidobacterium bifidum NCIMB 41171]
gi|310288214|ref|YP_003939473.1| recombination protein RecR [Bifidobacterium bifidum S17]
gi|311065081|ref|YP_003971807.1| Recombination protein RecR [Bifidobacterium bifidum PRL2010]
gi|313140681|ref|ZP_07802874.1| recombination protein recR [Bifidobacterium bifidum NCIMB 41171]
gi|309252151|gb|ADO53899.1| recombination protein RecR [Bifidobacterium bifidum S17]
gi|310867401|gb|ADP36770.1| RecR Recombination protein [Bifidobacterium bifidum PRL2010]
gi|313133191|gb|EFR50808.1| recombination protein recR [Bifidobacterium bifidum NCIMB 41171]
Length = 200
Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +L+ ++ G L +A+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDAFAGLPGIGPKGAQRIAFYLLSASDEETGKLVDAITEVKEKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV PC +C D +RD VI VVE+ D+ ++ER++ YHVLGG+++P+ +
Sbjct: 60 DICGNVCEVSPCPVCADPRRDHGVICVVEEPKDVMSIERTREYRGQYHVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L++R++ +++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G
Sbjct: 120 GPADLNIPKLLDRLKTDEVKEVILALDPNIEGEATTTYLSRLLSPLGIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
S+L+Y D+ T+ A+ R
Sbjct: 180 SDLEYADEVTLGRALTGRRE 199
>gi|266621801|ref|ZP_06114736.1| recombination protein RecR [Clostridium hathewayi DSM 13479]
gi|288866490|gb|EFC98788.1| recombination protein RecR [Clostridium hathewayi DSM 13479]
Length = 198
Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G +SA+R H++ E+ + LA ++ + V C C
Sbjct: 2 DYYSSQITKLIEELSKLPGIGSKSAQRLAFHIINMPEESVTSLASSITEAKHNVHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +R+ VI+VVED DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDQELCPICKSDKRNHKVIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ + E+I A ++++EG+TTA Y+ +K V++TR+A G+P+G +L
Sbjct: 122 DIKLKELMQRL-QGDVEEVIIATNSSLEGETTAMYLSKLIKPTGVRVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 181 EYIDEVTLLRALEGRVEL 198
>gi|37523068|ref|NP_926445.1| recombination protein [Gloeobacter violaceus PCC 7421]
gi|73621488|sp|Q7NFM5|RECR_GLOVI RecName: Full=Recombination protein recR
gi|35214071|dbj|BAC91440.1| recombination protein [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP++A+R HL+++ + LA+A+ ++ +CS C
Sbjct: 1 MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC R I VV + DL A+ER++ YHVLGG ++P++ IGPE
Sbjct: 61 NLSAEDPCDICRQPGRQGETICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ ++E+I AI+ + EG+ T Y+ +K + ++TR+A+G+P+G +L+
Sbjct: 121 LRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVKVLGPRVTRIAFGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R +
Sbjct: 181 YADEMTLARALEGRREI 197
>gi|166033192|ref|ZP_02236021.1| hypothetical protein DORFOR_02914 [Dorea formicigenerans ATCC
27755]
gi|166027549|gb|EDR46306.1| hypothetical protein DORFOR_02914 [Dorea formicigenerans ATCC
27755]
Length = 198
Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI L+R+PG G +SA R HL+ ++ + LA+ M V C C
Sbjct: 2 DYYSNQISKLIDELSRLPGIGAKSASRLAFHLIHMPKEEVKRLADTMVEARENVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDQELCPICSNLNRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI R+ + E+I A ++++EG+TTA YI +K VK++R+A G+P+G +L
Sbjct: 122 DIKLKELIRRL-EGDVEEVIIATNSSLEGETTAMYISKLIKPTGVKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTQL 198
>gi|319408025|emb|CBI81679.1| recombination protein RecR [Bartonella schoenbuchensis R1]
Length = 201
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 156/201 (77%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ NKV +C
Sbjct: 1 MSQHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKEILLEPLGAAIQEAVNKVSIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGNVDTTDPC IC D +RD + IIVVED++DLWALER+ + A YHVLGG LSPLD I
Sbjct: 61 SICGNVDTTDPCLICTDPRRDNTTIIVVEDISDLWALERAGILPARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNITSLINRVINDSITEVILAVNATVEGQTTAHYITDQLSNFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+RT L
Sbjct: 181 GELDYLDDGTLAAALRARTNL 201
>gi|121601748|ref|YP_989489.1| recombination protein RecR [Bartonella bacilliformis KC583]
gi|166221924|sp|A1UU36|RECR_BARBK RecName: Full=Recombination protein recR
gi|120613925|gb|ABM44526.1| recombination protein RecR [Bartonella bacilliformis KC583]
Length = 201
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 156/201 (77%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K ITG EIE LI +LARIPG GPRSARRA LHL+KKKE LL PL A+ + +KV +C
Sbjct: 1 MAKHITGPEIERLIHLLARIPGLGPRSARRAALHLIKKKEALLEPLGTAIRDAVDKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DTTDPC+IC D +RD IIVVED++DLWALER+ + A YHVLGG LSPLD I
Sbjct: 61 SVCGNIDTTDPCSICTDPRRDNGTIIVVEDISDLWALERAGTLLARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++ATIEGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNITSLINRVIKDPITEIILAVNATIEGQTTAHYITDQLSNFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+RT
Sbjct: 181 GELDYLDDGTLAAALRARTNF 201
>gi|269976048|ref|ZP_06183052.1| recombination protein RecR [Mobiluncus mulieris 28-1]
gi|269935876|gb|EEZ92406.1| recombination protein RecR [Mobiluncus mulieris 28-1]
Length = 201
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 125/199 (62%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+I ++NLI L ++PG GP+SA+R +++ + + LA + + + C
Sbjct: 2 SQIFTDALQNLIDALGKMPGVGPKSAQRIAFWVLQTDPENIKNLAATLQTAKDTIRFCET 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+ C IC+D +RD S+I VVE+ D+ +LE++++ LYHVLGG++ P++ IGP
Sbjct: 62 CGNITENPVCQICVDPRRDRSLICVVEEAKDIASLEKTRSYRGLYHVLGGAIDPINGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + I+SL+ER++ +++E+I A + +EG+ TA Y+ L + + +RLA G+P+GS+
Sbjct: 122 DQLRIKSLMERLQDAEVKEVIIATNPNVEGEATATYLSRLLATLQIPASRLASGLPVGSD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ R L
Sbjct: 182 LEYADEVTLSRALEGRHSL 200
>gi|325269487|ref|ZP_08136103.1| recombination protein R [Prevotella multiformis DSM 16608]
gi|324988106|gb|EGC20073.1| recombination protein R [Prevotella multiformis DSM 16608]
Length = 202
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 136/199 (68%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +E ++ + +PG G ++A R LHL+++ + + A+A++++ + V C +
Sbjct: 2 QQYPSQLLERAVEAFSCLPGVGRKTALRLVLHLLRQSDDEVDGFADAISHVKHDVKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ +D C+IC D +RDAS++ VVE+V D+ A+E ++ + LYHVLGG +SPLD IGP
Sbjct: 62 CHNISDSDLCSICADPRRDASLVCVVENVQDVMAIENTQQFHGLYHVLGGVISPLDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I+SL++R+E +RE+I A+S+T+EG TT YI KLKG DVK++ +A GI +G E
Sbjct: 122 HDLEIESLVKRVEKGGVREIILALSSTMEGDTTNFYISRKLKGKDVKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRTPF 200
>gi|50954177|ref|YP_061465.1| recombination protein RecR [Leifsonia xyli subsp. xyli str. CTCB07]
gi|71648823|sp|Q6AGY5|RECR_LEIXX RecName: Full=Recombination protein recR
gi|50950659|gb|AAT88360.1| recombination protein RecR [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 198
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 125/196 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C ICG
Sbjct: 1 MYAGIVQELIDELGRLPGIGPKSAQRIAFHILQTEAFDVTRLAEVLLEVRDKVRFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C+IC D +RD ++I VVE+ D+ A+ER++ LYHVLGG++SP+D +GP+D
Sbjct: 61 NVSEQATCSICRDPRRDPALICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ ++E+I A +EG+ TA Y+ L ++V++TRLA G+P+G +L+
Sbjct: 121 LRIRQLVQRLADGTVQEVIIATDPNLEGEATATYLSRLLTTLEVRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRRQ 196
>gi|222084331|ref|YP_002542860.1| DNA recombination protein [Agrobacterium radiobacter K84]
gi|254790745|sp|B9JGT9|RECR_AGRRK RecName: Full=Recombination protein recR
gi|221721779|gb|ACM24935.1| DNA recombination protein [Agrobacterium radiobacter K84]
Length = 201
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D RD SVIIVVEDVADLWALER+ A+NA YHVLGG LSPLD +
Sbjct: 61 SRCGNVDTVDPCTVCTDGHRDQSVIIVVEDVADLWALERAAAMNAAYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ +RE+I A++AT+EGQTTAHYI D+L G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIQRVGEGGVREIIIAVNATVEGQTTAHYITDQLAGLEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTAI 201
>gi|317123594|ref|YP_004097706.1| DNA replication and repair protein RecR [Intrasporangium calvum DSM
43043]
gi|315587682|gb|ADU46979.1| DNA replication and repair protein RecR [Intrasporangium calvum DSM
43043]
Length = 199
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 120/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+ A+R HL++ + L A+ + +V C +CG
Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKGAQRIAFHLLQADSDDVSRLVTALTEVKARVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD + I VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D
Sbjct: 61 NVAEAERCRICADSRRDHTAICVVEEPKDIVAIERTREFRGTYHVLGGAISPIDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L++R+ +++E+I A +EG+ TA Y+ L+ + + +TRLA G+P+G +L+
Sbjct: 121 LRVRELMQRLASGEVQEVIIATDPNLEGEATATYLSRLLRDVGLTVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRRR 196
>gi|241207075|ref|YP_002978171.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860965|gb|ACS58632.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 201
Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats.
Identities = 134/201 (66%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ +RELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRVGEGGMRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RTV+
Sbjct: 181 GELDYLDEGTLAAALRARTVI 201
>gi|160936874|ref|ZP_02084238.1| hypothetical protein CLOBOL_01762 [Clostridium bolteae ATCC
BAA-613]
gi|158440064|gb|EDP17811.1| hypothetical protein CLOBOL_01762 [Clostridium bolteae ATCC
BAA-613]
Length = 198
Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G +SA+R H++ ++ + LA AM N V C C
Sbjct: 2 DYYSSQITKLIEELSKLPGVGAKSAQRLAFHIINMPKEQVEELAGAMTGARNNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDKELCPICSSDRRNHKTIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R++ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIKLKELMQRLQS-DVEEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|220909545|ref|YP_002484856.1| recombination protein RecR [Cyanothece sp. PCC 7425]
gi|254790763|sp|B8HXF0|RECR_CYAP4 RecName: Full=Recombination protein recR
gi|219866156|gb|ACL46495.1| recombination protein RecR [Cyanothece sp. PCC 7425]
Length = 205
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG GP++A+R LHL+K+ + + LA+A+ +V LCS+C
Sbjct: 4 VYTRPLARLIEQLQRLPGVGPKTAQRLALHLLKRPDSEVQALAQALLEAKQQVGLCSVCF 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C +C RD + VV D D+ ALE+++ + YHVLGG +SP++ IGPE
Sbjct: 64 HLSAEPVCEVCRAPSRDEGTLCVVADSRDVIALEKTREYHGKYHVLGGLISPMEGIGPEQ 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI----DVKITRLAYGIPMG 180
+ IQ LI+R+ + E+I AIS +IEG+TT YI LK + K+TR+A+G+PMG
Sbjct: 124 LHIQPLIQRVSQTAVEEVIMAISPSIEGETTTLYIAQLLKPLTKLKGAKVTRIAFGLPMG 183
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ A+ R L
Sbjct: 184 GDLEYADEVTLARALEGRREL 204
>gi|222147139|ref|YP_002548096.1| recombination protein RecR [Agrobacterium vitis S4]
gi|254790746|sp|B9JYJ6|RECR_AGRVS RecName: Full=Recombination protein recR
gi|221734129|gb|ACM35092.1| DNA recombination protein [Agrobacterium vitis S4]
Length = 201
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 166/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KK+EQL+GPLA AM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKREQLMGPLALAMGEAHAKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD S+IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD +
Sbjct: 61 SCCGNVDTIDPCTVCTDERRDQSMIIVVEDVSDLWALERAGAMNVAYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+R+ +RE+I A++AT+EGQTTAHYI D L G+ VK TRLA+G+P+G
Sbjct: 121 GPDDLNIKGLIDRVAKGGVREIIIAVNATVEGQTTAHYITDHLAGLGVKTTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT++
Sbjct: 181 GELDYLDEGTLSAALRARTLI 201
>gi|325288354|ref|YP_004264535.1| DNA replication and repair protein RecR [Syntrophobotulus
glycolicus DSM 8271]
gi|324963755|gb|ADY54534.1| DNA replication and repair protein RecR [Syntrophobotulus
glycolicus DSM 8271]
Length = 198
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 121/201 (60%), Gaps = 3/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +LI +R+PG GP++A R + ++ L++A++ + C
Sbjct: 1 MDFFYYPQPLADLIAAFSRLPGIGPKTAGRLAFYALQH-ADEATGLSKAISAALKDIRYC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGN +DPC IC +R+ ++ VVE D+ ALE++ LYHVL G LSP++ I
Sbjct: 60 SICGNYTDSDPCRICSSPKRNREILCVVEQSRDVVALEKTGEYKGLYHVLHGVLSPMEGI 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I L+ R+ + + E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G
Sbjct: 120 GPEQLNIGGLLSRL--EGVSEIVIAVNPTVEGEATALYLARLLKPLQIKVTRIAHGLPVG 177
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
++L+Y D+ TI A+ R L
Sbjct: 178 ADLEYADEVTIARALEGRRPL 198
>gi|239623038|ref|ZP_04666069.1| recombination protein RecR [Clostridiales bacterium 1_7_47_FAA]
gi|239522405|gb|EEQ62271.1| recombination protein RecR [Clostridiales bacterium 1_7_47FAA]
Length = 198
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+++PG G +SA+R H++ ++ + LA AM N V C C
Sbjct: 2 DYYSSQITKLIEELSKLPGVGAKSAQRLAFHIINMPKEQVEELAGAMTGARNNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDKELCPICSSDRRNHKTIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R++ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIKLKELMQRLQS-DVEEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT +
Sbjct: 181 EYIDEVTLLRALEGRTEI 198
>gi|118590528|ref|ZP_01547930.1| recombination protein RecR [Stappia aggregata IAM 12614]
gi|118436991|gb|EAV43630.1| recombination protein RecR [Stappia aggregata IAM 12614]
Length = 202
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 126/202 (62%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M +K + G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PLAEAM ++ +
Sbjct: 1 MAQKSVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLAEAMGIAVREIGI 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CS CG VDT+DPC IC D +RD SV++VVEDVADLWALER+ AVNA YHVLGG+LSPLD
Sbjct: 61 CSTCGTVDTSDPCTICSDPKRDQSVLVVVEDVADLWALERAGAVNARYHVLGGNLSPLDG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGP+D+ + SLI+R + E+I AI+AT+EGQTTAHYIMD+L ++V +TRLA+G+P+
Sbjct: 121 IGPDDLNLASLIDRCGSEGFSEVILAINATVEGQTTAHYIMDQLSHLEVNVTRLAHGVPV 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G ELDYLD+GT+ +A+R+RT
Sbjct: 181 GGELDYLDEGTLAQALRARTRF 202
>gi|313906300|ref|ZP_07839643.1| recombination protein RecR [Eubacterium cellulosolvens 6]
gi|313468856|gb|EFR64215.1| recombination protein RecR [Eubacterium cellulosolvens 6]
Length = 199
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 124/198 (62%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI+ + R+PG GP++A+R H++ E+ + LA ++ V C IC
Sbjct: 2 EYYSDHIGRLIEQMGRLPGIGPKTAQRLAFHIIGMSEEHVKELASSITEAKANVRYCKIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + + C IC + R+ I+VVE+ DL A E+++ + +YHVL G++SP+ IGP+
Sbjct: 62 GTLTDQEICPICANPSRNHREIMVVENSRDLAAYEKTQKYDGVYHVLNGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R++ + E+I A ++++EG+TTA YI ++ +K+TR+A G+P+G +L
Sbjct: 122 DIRLKELMQRLQD-DVDEVIIATNSSLEGETTAMYISKLIRPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|315650375|ref|ZP_07903446.1| recombination protein R [Eubacterium saburreum DSM 3986]
gi|315487302|gb|EFU77613.1| recombination protein R [Eubacterium saburreum DSM 3986]
Length = 198
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI+ L+++PG G +SA+R H++ + + L++A+ + V C+ C
Sbjct: 2 DYYSSHISKLIEELSKLPGVGAKSAQRLAFHIIGMSSEQVESLSDAIKDAKGNVHYCNEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC +++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDGDICPICANERRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI+R+ + E+I A ++T+EG+TTA YI +K ++++R+A G+P+G +L
Sbjct: 122 DIKLKELIKRL-EGDVNEVIIATNSTLEGETTAMYIAKLIKPTGIEVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 181 EYIDEVTLLRALEGRRTL 198
>gi|28572867|ref|NP_789647.1| recombination protein RecR [Tropheryma whipplei TW08/27]
gi|73621528|sp|Q83N83|RECR_TROW8 RecName: Full=Recombination protein recR
gi|28411000|emb|CAD67385.1| recombination protein RecR [Tropheryma whipplei TW08/27]
Length = 198
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +++LI+ L ++PG GP+SA+R +++ + L+E + ++ +V C +CG
Sbjct: 1 MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC D +RD VI VVE+ D+ A+E+++ + LYHVLGG++SP+D +GP+D
Sbjct: 61 NFSEEDECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ I E++ A +EG+ TA YI + + +++++LA G+P+GS+L+
Sbjct: 121 LNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R +
Sbjct: 181 YADEITLGRALEGRQYI 197
>gi|167767542|ref|ZP_02439595.1| hypothetical protein CLOSS21_02061 [Clostridium sp. SS2/1]
gi|317498611|ref|ZP_07956904.1| recombination protein RecR [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710834|gb|EDS21413.1| hypothetical protein CLOSS21_02061 [Clostridium sp. SS2/1]
gi|291558498|emb|CBL37298.1| recombination protein RecR [butyrate-producing bacterium SSC/2]
gi|316894098|gb|EFV16287.1| recombination protein RecR [Lachnospiraceae bacterium 5_1_63FAA]
Length = 198
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L ++PG GP+SA R H++ + + L++ + + V C C
Sbjct: 2 DYYSNQITQLIEELGKLPGIGPKSAGRLAFHIINMPQDQVQKLSDTIISAKTNVHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +RD S I+VVE+ DL A E++ +YHVL G++SP+ IGP+
Sbjct: 62 CTLTDNEICPICASDKRDHSTIMVVENTRDLMAYEKTGKYEGVYHVLHGAISPMLGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ ++ELI A ++++EG+TTA YI +K +K++++A G+P+G +L
Sbjct: 122 DIRLKELMARL-QGDVKELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT +
Sbjct: 181 EYIDEVTLLRALEGRTEI 198
>gi|119476223|ref|ZP_01616574.1| recombination protein RecR [marine gamma proteobacterium HTCC2143]
gi|119450087|gb|EAW31322.1| recombination protein RecR [marine gamma proteobacterium HTCC2143]
Length = 199
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+ L++ L +PG GP+SA+R HL+++ + LAE + + V CS C
Sbjct: 3 FSPLIDQLVEALRCLPGVGPKSAQRMAFHLLERDREGGLKLAEQLDTAMHGVARCSSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C+IC + +RD + I VVE AD++A E+S LY VL G LSP+D IGP +I
Sbjct: 63 LTEQPRCSICDNFKRDRTTICVVETPADVFAFEQSGIYRGLYFVLMGHLSPIDGIGPAEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L++R++ ++I+E+I A + T+EG+ TA+YI +++K + K++R+A+G+P+G EL+Y
Sbjct: 123 GVSDLLQRLQEEEIQEVILATNPTVEGEATAYYITEQVKSMGAKVSRIAHGVPLGGELEY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GT+ A+ R +
Sbjct: 183 VDSGTLAHALNGRRL 197
>gi|225351266|ref|ZP_03742289.1| hypothetical protein BIFPSEUDO_02858 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158722|gb|EEG71964.1| hypothetical protein BIFPSEUDO_02858 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 200
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + K+ C
Sbjct: 1 MALAYDG-AIQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLIDAITEVKEKIRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG ++P+ +
Sbjct: 60 DICGNVCETSPCPVCADPRRDHSVICVVEESKDVMSIERTREYRGLYHVLGGVINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I LIER++ ++ E+I A++ +EG+ T ++ L D+K+TRLA G+P+G
Sbjct: 120 QPSDLNIAKLIERLKDSEVAEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A+ R
Sbjct: 180 GDLEYADEITLGRALAGRRA 199
>gi|268318152|ref|YP_003291871.1| recombination protein RecR [Rhodothermus marinus DSM 4252]
gi|262335686|gb|ACY49483.1| recombination protein RecR [Rhodothermus marinus DSM 4252]
Length = 215
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 76/213 (35%), Positives = 126/213 (59%), Gaps = 16/213 (7%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
T +E L++ L R+P G ++A+R +++K + + LA+A+ + +V C+IC
Sbjct: 3 FTSPSVEALVEQLMRLPTVGRKTAQRLAAYILKMPREEVEALAQALLAVKERVRQCAICF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + CAIC +RD + I VVE+ +D+ ALER+ +YHVLGG +SPLD IGP+D
Sbjct: 63 NVTDEEVCAICRSPRRDHTTICVVEEPSDVLALERTGEYRGVYHVLGGVISPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKK----------------IRELIFAISATIEGQTTAHYIMDKLKGIDV 168
+ I+ L+ R+ ++E+I A++ +EG TTA+Y+ LK + V
Sbjct: 123 LRIRELVARVAPANGDPERAALYPDGRIPRVQEVILALNPNVEGDTTAYYLAQLLKPLGV 182
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++TR+A G+P+G +L+Y D+ T+ A+ R L
Sbjct: 183 RVTRIARGLPIGGDLEYADEATLSRALEGRLAL 215
>gi|225026636|ref|ZP_03715828.1| hypothetical protein EUBHAL_00887 [Eubacterium hallii DSM 3353]
gi|224956006|gb|EEG37215.1| hypothetical protein EUBHAL_00887 [Eubacterium hallii DSM 3353]
Length = 199
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 119/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I NLI+ L R+PG G +SA+R H++ E+ + LA+ + K+ C C
Sbjct: 2 NYYSTQITNLIEELRRLPGIGSKSAQRLAFHIINMPEEHVHHLAQTLVTAREKIRYCKYC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ ++ C IC +RD S I+VVE DL A E++ + +YHVL G+L+P GP+
Sbjct: 62 CTLTDSEVCPICASTKRDHSTIMVVEHTQDLAAYEKTGQYHGVYHVLQGTLAPSLGKGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI + L ER+ +++ELI A +++++G+ TA YI K+K +K+TR+A G+P+G EL
Sbjct: 122 DIRFKELEERLNNPEVKELILATNSSLDGEATAMYITKKVKPRGIKVTRIASGVPIGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 182 EYIDEVTLSRALDGRVEL 199
>gi|227824063|ref|YP_002828036.1| recombination protein RecR [Sinorhizobium fredii NGR234]
gi|254790779|sp|C3MC58|RECR_RHISN RecName: Full=Recombination protein recR
gi|227343065|gb|ACP27283.1| recombination protein, RecR [Sinorhizobium fredii NGR234]
Length = 201
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 134/201 (66%), Positives = 171/201 (85%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD SVIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SCCGNVDTIDPCTVCTDERRDRSVIIVVEDVADLWALERAAALNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L++R+ +REL+ A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIKGLVDRVAKGGVRELVIAVNATVEGQTTAHYITDQLEGMEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT +
Sbjct: 181 GELDYLDEGTLTAALRARTTI 201
>gi|330470587|ref|YP_004408330.1| recombination protein RecR [Verrucosispora maris AB-18-032]
gi|328813558|gb|AEB47730.1| recombination protein RecR [Verrucosispora maris AB-18-032]
Length = 197
Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R +++ + LA A+ + V C+ C
Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFYVLSADPADVNRLAGALRKVKELVRFCTNCY 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV +D C IC D +R VI VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++
Sbjct: 61 NVAESDQCRICRDPRRSDEVICVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+
Sbjct: 121 LRIRELMTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGISVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGRRA 196
>gi|325856054|ref|ZP_08171943.1| recombination protein RecR [Prevotella denticola CRIS 18C-A]
gi|325483726|gb|EGC86690.1| recombination protein RecR [Prevotella denticola CRIS 18C-A]
Length = 202
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 133/199 (66%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +E ++ +++PG G ++A R LHL+++ + AEA+ + + V C +
Sbjct: 2 QQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQPADEVDGFAEAIVRVKHDVKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ +D C+IC D +RDAS++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +GP
Sbjct: 62 CHNISDSDVCSICSDPRRDASLVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I SL++R++ ++E+I A+++T+EG TT Y+ KLKG +VK++ +A GI +G E
Sbjct: 122 HDLEIDSLVKRVDEGGVKEVILALASTMEGDTTNFYLSRKLKGKNVKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRTPF 200
>gi|225378765|ref|ZP_03755986.1| hypothetical protein ROSEINA2194_04435 [Roseburia inulinivorans DSM
16841]
gi|225209394|gb|EEG91748.1| hypothetical protein ROSEINA2194_04435 [Roseburia inulinivorans DSM
16841]
Length = 217
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+ +PG G +SA+R H++ + + L+EA+ N V C C
Sbjct: 21 DYYSSQINKLIQELSELPGIGAKSAQRLAFHILNMPVEQVEGLSEAIINARKNVRYCKEC 80
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC D R+ I+VVE+ DL A E+++ + +YHVL G++SP+ IGP
Sbjct: 81 FTLTDDELCPICKDASRNHKTIMVVENTRDLAAYEKTQKYDGVYHVLHGAISPMLGIGPN 140
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ + + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 141 DIKLKELMQRL-QQDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 199
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 200 EYIDEVTLLRALEGRTEL 217
>gi|330722042|gb|EGG99965.1| Recombination protein RecR [gamma proteobacterium IMCC2047]
Length = 199
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI L +PG GP+SA+R LHL+++ + LA+ +A +V C C
Sbjct: 3 FSPLVDQLIDALRCLPGVGPKSAQRMALHLLERDREGAFRLAQKLAESIKEVGHCQQCRI 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T+ C IC D +RDA+ + VVE D+ A+E++ Y VL G LSP+D IGP+DI
Sbjct: 63 LCETELCRICADPKRDAAKLCVVESPMDVMAIEQTNLFRGRYFVLMGHLSPIDGIGPQDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+E+++ ++ ELI A + T+EG+ TAHYI +L+ +V ITR+A+G+P+G EL++
Sbjct: 123 GIDLLVEQVKENQVEELIMATNPTVEGEATAHYIAAQLESPNVTITRIAHGVPLGGELEF 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A++ R L
Sbjct: 183 VDGGTLAHALQGRQTL 198
>gi|229823581|ref|ZP_04449650.1| hypothetical protein GCWU000282_00879 [Catonella morbi ATCC 51271]
gi|229787025|gb|EEP23139.1| hypothetical protein GCWU000282_00879 [Catonella morbi ATCC 51271]
Length = 198
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R +++ KE + A+A+ + + C CGN
Sbjct: 3 YPAPIAKLINSFTKLPGIGAKTAARLAFYVLDMKESDVTEFAQALIQVKRDLRFCPTCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ ++ C IC D RD+ ++VVED D+ ++ER + LYHVL G LSP++ GPED+
Sbjct: 63 ITDSELCVICSDPSRDSKTVLVVEDARDVMSMERMHEYHGLYHVLHGVLSPMEGTGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL+ R++ +I E+I A +AT EG+ TA Y+ LK +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIPSLLRRLQETEIEEVIVATNATAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+F AI R L
Sbjct: 183 ADEMTLFRAIEGRREL 198
>gi|171741490|ref|ZP_02917297.1| hypothetical protein BIFDEN_00575 [Bifidobacterium dentium ATCC
27678]
gi|283455170|ref|YP_003359734.1| recombination protein RecR [Bifidobacterium dentium Bd1]
gi|306823769|ref|ZP_07457143.1| recombination protein R [Bifidobacterium dentium ATCC 27679]
gi|309802080|ref|ZP_07696190.1| recombination protein RecR [Bifidobacterium dentium JCVIHMP022]
gi|171277104|gb|EDT44765.1| hypothetical protein BIFDEN_00575 [Bifidobacterium dentium ATCC
27678]
gi|283101804|gb|ADB08910.1| recombination protein RecR [Bifidobacterium dentium Bd1]
gi|304552767|gb|EFM40680.1| recombination protein R [Bifidobacterium dentium ATCC 27679]
gi|308221281|gb|EFO77583.1| recombination protein RecR [Bifidobacterium dentium JCVIHMP022]
Length = 200
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G I+ LI A +PG GP+ A+R +++ ++ L +A+ + KV C
Sbjct: 1 MALAYDG-AIQRLIDAFAHLPGIGPKGAQRIAFYMLNASDEESQGLIDAITEVKEKVRFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGNV T PC +C+D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ +
Sbjct: 60 EICGNVCETSPCPVCVDPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G
Sbjct: 120 QPSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLAQLLSQTDIKVTRLASGLPVG 179
Query: 181 SELDYLDDGTIFEAIRSRT 199
+L+Y D+ T+ A+ R
Sbjct: 180 GDLEYADEITLGRALAGRR 198
>gi|258593671|emb|CBE70012.1| Recombination protein recR [NC10 bacterium 'Dutch sediment']
Length = 199
Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 127/195 (65%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI L R+PG GP++A+R T HL+K + LA+A+ + +++ C++C N
Sbjct: 4 YAPTLVRLIGELVRLPGIGPKTAQRLTFHLLKAGREEAIALAQAIIELKDRIRSCAVCYN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC+D RD SV+ VVE+ DLWA+E++ YHVLGGSLSPL+ GP+ +
Sbjct: 64 ISEGEQCPICVDPTRDGSVLCVVEEANDLWAIEKTATFKGRYHVLGGSLSPLEGRGPDQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++L++R+E +++E+I A + +EG+ TA Y+ LK + V++TR+A G+PMGS+L+Y
Sbjct: 124 TAKALLQRLEGGEVKEVILATNPNVEGEATAMYLSRLLKPLAVRVTRIARGLPMGSDLEY 183
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ +++ R
Sbjct: 184 ADEVTLSKSLEGRRE 198
>gi|167748330|ref|ZP_02420457.1| hypothetical protein ANACAC_03074 [Anaerostipes caccae DSM 14662]
gi|167652322|gb|EDR96451.1| hypothetical protein ANACAC_03074 [Anaerostipes caccae DSM 14662]
Length = 198
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L ++PG GP+SA R H++ + LAE++ + V C C
Sbjct: 2 DYYSSQITKLIEELGKLPGIGPKSAGRLAFHIINMPLDQVKHLAESILDAKENVHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC +RD S I+VVE DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 CTLTDQDICPICSSSKRDHSTIMVVESTRDLMAYEKTGKYEGIYHVLHGAISPMLGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ + ELI A ++++EG+TTA YI +K +K++++A G+P+G +L
Sbjct: 122 DIRLKELMARL-QGDVNELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|281420173|ref|ZP_06251172.1| recombination protein RecR [Prevotella copri DSM 18205]
gi|281405668|gb|EFB36348.1| recombination protein RecR [Prevotella copri DSM 18205]
Length = 203
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 131/201 (65%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ++ + +E + +++PG G ++A R L ++K+K + + A+ ++ + +V C
Sbjct: 1 MQQQFSSTLLEKAVAEFSKLPGIGRKTALRLVLFMLKRKSEDVELFADTISRMRREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RDAS I VVE+V D+ A+E ++ + LYHVLGG +SP+D I
Sbjct: 61 RVCHNISDTDVCPICSDSRRDASTICVVENVQDVLAIENTQQFHGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I+SL++R+ ++E+IFA+S+T+EG TT YI KL VK++ +A GI +G
Sbjct: 121 GPSDIEIESLVQRVAEGGVKEVIFALSSTMEGDTTNFYISRKLADYPVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSILNRTPF 201
>gi|163757649|ref|ZP_02164738.1| DNA recombination protein [Hoeflea phototrophica DFL-43]
gi|162285151|gb|EDQ35433.1| DNA recombination protein [Hoeflea phototrophica DFL-43]
Length = 201
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQK++TG EIE LI++LAR+PG GPRSARRA LHL+KKK+QL+GPLA AM ++KV +C
Sbjct: 1 MQKRVTGPEIERLIQLLARVPGLGPRSARRAALHLIKKKDQLMGPLALAMNEAHDKVQIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGN DT DPC +C D RD SVIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 STCGNADTVDPCTVCTDPARDQSVIIVVEDVADLWALERAAAMNAGYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I L++R+ +RE++ A++AT+EGQTTAHYI ++L G D+K+TRLA+G+P+G
Sbjct: 121 GPDDLSIAGLVDRVARGGVREILIAVNATVEGQTTAHYITEQLSGFDLKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR+RT
Sbjct: 181 GELDYLDEGTLAAAIRARTAF 201
>gi|295425169|ref|ZP_06817873.1| recombination protein R [Lactobacillus amylolyticus DSM 11664]
gi|295065145|gb|EFG56049.1| recombination protein R [Lactobacillus amylolyticus DSM 11664]
Length = 199
Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI ++PG G ++A R + + EQ + A+++ + + CSICGN
Sbjct: 3 YPLPIAHLIDSYMKLPGIGEKTATRLAFYTLDMPEQDVQEFAKSLTEVKQDLHQCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC + +RD + I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITEQDPCAICSNPERDQTTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDQVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTSL 199
>gi|332686116|ref|YP_004455890.1| recombination protein RecR [Melissococcus plutonius ATCC 35311]
gi|332370125|dbj|BAK21081.1| recombination protein RecR [Melissococcus plutonius ATCC 35311]
Length = 198
Score = 296 bits (760), Expect = 8e-79, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ ++PG G ++A R + + E+ + A+++ ++ + CS CG
Sbjct: 2 YYPQPIAKLIESYMKLPGIGQKTAIRLAFYTIDMDEEDVTNFAKSLISVKRDLHFCSNCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D+ RD S I+V+E+ D+ A+E+ + + LYHVL G LSP++ GPED
Sbjct: 62 NITEEDLCDICQDKTRDHSTILVIEEPKDITAMEKMREYHGLYHVLNGVLSPMEGTGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I SLI+R+ +I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 122 INIASLIQRLHNDEIKEVILATNATTEGEATAMYLSRFIKPAGIKVTRLAHGLSVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +AI R L
Sbjct: 182 YADEITLLKAIEGRREL 198
>gi|319405114|emb|CBI78720.1| recombination protein RecR [Bartonella sp. AR 15-3]
Length = 201
Score = 296 bits (760), Expect = 8e-79, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI+ LARIPG GPRSARRA L+L+KKKE LL PL AM NKV +C
Sbjct: 1 MSKHIAGPEIERLIQFLARIPGLGPRSARRAALYLIKKKETLLEPLGSAMLETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDTTDPC+IC D +RD S+IIVVED++DLWALER+K ++A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTTDPCSICTDPRRDESIIIVVEDISDLWALERAKFLSARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNIISLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT
Sbjct: 181 GELDYLDDGTLAAALQARTNF 201
>gi|291520249|emb|CBK75470.1| recombination protein RecR [Butyrivibrio fibrisolvens 16/4]
Length = 199
Score = 296 bits (760), Expect = 9e-79, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ KEI NLI L+ +P G +SA+R H++ E+ + LA A+ V C C
Sbjct: 2 EYYSKEISNLIAELSDLPSIGSKSAQRLAFHILGMDEEKVNDLANAIIQARKNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + +R+ ++I+VVED DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDDELCPICSNPKRNKNIIMVVEDTRDLAAYEKTGKFDGVYHVLHGAISPMAGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G L
Sbjct: 122 DIKLKELMVRLQQNDVEEVIVATNSSLEGETTAAYISKLIKPTGIKVSRIASGVPVGGNL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT +
Sbjct: 182 EYIDEVTLLRALDGRTEI 199
>gi|302384620|ref|YP_003820442.1| recombination protein RecR [Clostridium saccharolyticum WM1]
gi|302195248|gb|ADL02819.1| recombination protein RecR [Clostridium saccharolyticum WM1]
Length = 198
Score = 296 bits (760), Expect = 9e-79, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+R+PG G +SA+R H++ E+ + LA ++ V C C
Sbjct: 2 NYYSSQITRLIEELSRLPGIGSKSAQRLAFHIINMPEEQVAGLASSITEAKRNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC ++R+ VI+VVED DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDQEMCPICRSEKRNHKVIMVVEDTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ + E+I A ++++EG+TTA YI +K +++TR+A G+P+G +L
Sbjct: 122 DIKLKELMQRL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIRVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 181 EYIDEVTLLRALEGRVEL 198
>gi|167759646|ref|ZP_02431773.1| hypothetical protein CLOSCI_02004 [Clostridium scindens ATCC 35704]
gi|167662772|gb|EDS06902.1| hypothetical protein CLOSCI_02004 [Clostridium scindens ATCC 35704]
Length = 198
Score = 296 bits (760), Expect = 9e-79, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ LI+ L+ +PG G +SA R HL+ + LA M V C+ C
Sbjct: 2 DYYSSQMSKLIEELSCLPGIGSKSAARLAFHLIHMPLDDVKRLASTMVEARENVRYCAQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGPE
Sbjct: 62 YTLTDQELCPICSNSSRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LIER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELIERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTQL 198
>gi|302870392|ref|YP_003839029.1| recombination protein RecR [Micromonospora aurantiaca ATCC 27029]
gi|315503331|ref|YP_004082218.1| recombination protein recr [Micromonospora sp. L5]
gi|302573251|gb|ADL49453.1| recombination protein RecR [Micromonospora aurantiaca ATCC 27029]
gi|315409950|gb|ADU08067.1| recombination protein RecR [Micromonospora sp. L5]
Length = 197
Score = 296 bits (760), Expect = 9e-79, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 117/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R H++ + LA A+ + + V C+ C
Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLAGALRKVKDLVRFCTTCY 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++
Sbjct: 61 NVAESEQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ ++RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+
Sbjct: 121 LRIRELMTRLGGGEVRELILATDPNTEGEATATYLALMVKPMGIAVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGRRA 196
>gi|254786714|ref|YP_003074143.1| recombination protein RecR [Teredinibacter turnerae T7901]
gi|237687086|gb|ACR14350.1| recombination protein RecR [Teredinibacter turnerae T7901]
Length = 197
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ LI L +PG GP+SA R HL+++ + L++A+A +V C C
Sbjct: 1 MFSPLIDQLITSLRVLPGVGPKSATRMAFHLLERNREGAQALSQALAEASAQVKRCEQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC +RD ++ VVE AD+ A+E+S + +Y VL G LSP+D +GP +
Sbjct: 61 TLTEQPCCAICASSKRDRQLMCVVESPADVVAIEQSGTFSGVYFVLHGKLSPIDGVGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L ER + + I E+I A + T+EG+ TAHYI ++ K +K+TR+A+G+P+G EL+
Sbjct: 121 IGIDQLEERFQAEPISEVIIATNPTVEGEATAHYIAERAKKNAIKVTRIAHGVPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ AI SR +
Sbjct: 181 YIDGGTLAHAISSRREI 197
>gi|331701732|ref|YP_004398691.1| Recombination protein recR [Lactobacillus buchneri NRRL B-30929]
gi|329129075|gb|AEB73628.1| Recombination protein recR [Lactobacillus buchneri NRRL B-30929]
Length = 199
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + V E + ++A+ N + CSICGN
Sbjct: 3 YPEAIAKLIDSYMKLPGIGSKTATRLAFYTVDMNEDDVKAFSKALVATKNDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE+ D+ +E+ + + LYHVL G LSP++ GPED+
Sbjct: 63 LTDEDPCEICRDKTRDQSTILVVEEPKDVMVMEKVQEYHGLYHVLHGVLSPIEGKGPEDL 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SLI+R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 123 NISSLIKRLQQNKAVKEVIVATNATPEGEATAMYLSKLIKPAGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 183 YADEVTLFKAVQGRTEI 199
>gi|238917929|ref|YP_002931446.1| recombination protein RecR [Eubacterium eligens ATCC 27750]
gi|238873289|gb|ACR72999.1| recombination protein RecR [Eubacterium eligens ATCC 27750]
Length = 198
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I I LI+ L+R+PG G +SA+R H++ E + LA+ M + + C C
Sbjct: 2 DIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC DQ+RD I+VVE D+ A E++ +YHVL G++SP+ IGP
Sbjct: 62 FTLTDEELCPICRDQKRDHKTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ + E+I A ++ +EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIRLKELMVRL-QGDVDEVIIATNSNLEGETTAMYISKMIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALDGRTEL 198
>gi|15805234|ref|NP_293922.1| recombination protein RecR [Deinococcus radiodurans R1]
gi|7388065|sp|Q9ZNA2|RECR_DEIRA RecName: Full=Recombination protein recR
gi|151568115|pdb|2V1C|A Chain A, Crystal Structure And Mutational Study Of Recor Provide
Insight Into Its Role In Dna Repair
gi|151568116|pdb|2V1C|B Chain B, Crystal Structure And Mutational Study Of Recor Provide
Insight Into Its Role In Dna Repair
gi|6457868|gb|AAF09785.1|AE001882_3 recR protein [Deinococcus radiodurans R1]
Length = 220
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 2/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N
Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ +
Sbjct: 63 ITDAEKCDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y
Sbjct: 123 HIKPLLPRVGQG--MEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEY 180
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 181 TDEVTLGRALTGRQT 195
>gi|92113584|ref|YP_573512.1| recombination protein RecR [Chromohalobacter salexigens DSM 3043]
gi|122420126|sp|Q1QXJ5|RECR_CHRSD RecName: Full=Recombination protein recR
gi|91796674|gb|ABE58813.1| recombination protein RecR [Chromohalobacter salexigens DSM 3043]
Length = 203
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ L++ L +PG GP++A+R LHL+++ L A+ V C C
Sbjct: 3 FSPLVDQLLETLRVLPGVGPKTAQRMALHLLERDRDGGRRLVAALGEALEHVGYCQRCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T C+IC D +RD ++ VVE AD+ A+E++ LY VL G LSPLD IGPEDI
Sbjct: 63 LAETPLCSICEDARRDEGLLCVVESPADMLAIEQAGGFRGLYFVLHGHLSPLDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L ER+ + E+I A + T+EG+ TAHYI ++L+G V+++RLAYG+PMG EL+Y
Sbjct: 123 GLDQLDERLAGGSVEEVILATNPTVEGEATAHYIAEQLRGTGVRLSRLAYGVPMGGELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A R
Sbjct: 183 VDGGTLSRAFNGRLPF 198
>gi|288802015|ref|ZP_06407456.1| recombination protein RecR [Prevotella melaninogenica D18]
gi|288335450|gb|EFC73884.1| recombination protein RecR [Prevotella melaninogenica D18]
Length = 202
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 132/199 (66%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +E ++ +++PG G ++A R LHL+++ + + A+A+ + + V C +
Sbjct: 2 QQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQSTEDVDSFADAVIRVKHDVKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ + C+IC D +RDASV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IGP
Sbjct: 62 CHNISDNEVCSICSDPRRDASVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I+SL+ER+E ++E+I A+++T+EG TT YI KLK VK++ +A GI +G E
Sbjct: 122 HDLEIESLVERVEEGTVKEVILALASTMEGDTTNFYISRKLKDTGVKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRTPF 200
>gi|302669598|ref|YP_003829558.1| recombinational DNA repair protein RecR [Butyrivibrio
proteoclasticus B316]
gi|302394071|gb|ADL32976.1| recombinational DNA repair protein RecR [Butyrivibrio
proteoclasticus B316]
Length = 199
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 119/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ I LI L+ +PG G +SA+R +L+ + + LA+++ N V C C
Sbjct: 2 ELYSGHINKLIDELSSLPGIGGKSAQRLAFYLIGLPKDRVHKLADSIVNARENVHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC + RD I+VVE+ DL A E++ +YHVL G++SP+ +GP
Sbjct: 62 CTLTDDDICPICSNPGRDHKTIMVVENARDLAAYEKTGKFEGVYHVLHGAISPMLGVGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI + L++R++ ++ E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIRLAELMQRLQTHEVEEVIVATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 182 EYIDEVTLLRALEGRTEL 199
>gi|116511199|ref|YP_808415.1| DNA replication and repair protein RecR [Lactococcus lactis subsp.
cremoris SK11]
gi|123320630|sp|Q031X9|RECR_LACLS RecName: Full=Recombination protein recR
gi|116106853|gb|ABJ71993.1| DNA replication and repair protein RecR [Lactococcus lactis subsp.
cremoris SK11]
Length = 198
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 127/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICG
Sbjct: 2 YYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ +DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++
Sbjct: 62 NLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 122 INVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLAHGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ +R +
Sbjct: 182 YADEVTLSKAVENRLEI 198
>gi|90419788|ref|ZP_01227697.1| recombination protein recR [Aurantimonas manganoxydans SI85-9A1]
gi|90335829|gb|EAS49577.1| recombination protein recR [Aurantimonas manganoxydans SI85-9A1]
Length = 201
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 166/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LA++PG GPRSARRA LHLVK++EQLL PL+ AM +KV +C
Sbjct: 1 MAKPIAGPEIERLIQLLAKLPGLGPRSARRAALHLVKRREQLLAPLSAAMGEALDKVTIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT DPC IC D RD S++IVVEDV+DLWALER+KA+NA YHVLGG LSPLD I
Sbjct: 61 SVCGNIDTFDPCTICTDGSRDQSIVIVVEDVSDLWALERAKALNAAYHVLGGVLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ER+ ++ELI A++AT+EGQTTAHY+MD+L+G +V++TRLA+G+P+G
Sbjct: 121 GPDDLTIRQLVERVHKGGVKELILAVNATVEGQTTAHYLMDQLEGFEVRVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT L
Sbjct: 181 GELDYLDEGTLSAAMRSRTGL 201
>gi|317472131|ref|ZP_07931463.1| recombination protein RecR [Anaerostipes sp. 3_2_56FAA]
gi|316900535|gb|EFV22517.1| recombination protein RecR [Anaerostipes sp. 3_2_56FAA]
Length = 198
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L ++PG GP+SA R H++ + L+E++ + V C C
Sbjct: 2 DYYSSQITKLIEELGKLPGIGPKSAGRLAFHIINMPLDQVKHLSESILDAKENVHYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC +RD S I+VVE DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 CTLTDQDICPICSSSKRDHSTIMVVESTRDLMAYEKTGKYEGIYHVLHGAISPMLGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ + ELI A ++++EG+TTA YI +K +K++++A G+P+G +L
Sbjct: 122 DIRLKELMARL-QGDVNELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|260437832|ref|ZP_05791648.1| recombination protein RecR [Butyrivibrio crossotus DSM 2876]
gi|292809857|gb|EFF69062.1| recombination protein RecR [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
G ++ LI+ L+ +PG G ++A+R H++ E+ LA+A+ + + + C C
Sbjct: 2 DYYGSQLSRLIEELSALPGVGAKTAQRLAFHIINMPEERADGLAKAIVDAKHNIRYCKTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC + +R+ VI+VVE+V DL A E++ +YHVL G++SP+ IGP
Sbjct: 62 QTLTDRDECNICGNPERNHKVIMVVENVRDLVAYEKTGKYKGVYHVLHGAISPMLGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I+ L+ R+ + E+I A ++++EG+ TA Y+ +K +K+TR+A G+P+G +L
Sbjct: 122 DIKIKELLVRL-QGDVDEVIIATNSSLEGEATAMYLSKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTEL 198
>gi|49259537|pdb|1VDD|A Chain A, Crystal Structure Of Recombinational Repair Protein Recr
gi|49259538|pdb|1VDD|B Chain B, Crystal Structure Of Recombinational Repair Protein Recr
gi|49259539|pdb|1VDD|C Chain C, Crystal Structure Of Recombinational Repair Protein Recr
gi|49259540|pdb|1VDD|D Chain D, Crystal Structure Of Recombinational Repair Protein Recr
Length = 228
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 2/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N
Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ +
Sbjct: 63 ITDAEKCDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y
Sbjct: 123 HIKPLLPRVGQG--MEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEY 180
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 181 TDEVTLGRALTGRQT 195
>gi|302347114|ref|YP_003815412.1| recombination protein RecR [Prevotella melaninogenica ATCC 25845]
gi|302151179|gb|ADK97440.1| recombination protein RecR [Prevotella melaninogenica ATCC 25845]
Length = 202
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 132/199 (66%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +E ++ +++PG G ++A R LHL+++ + + A+A+ + + V C +
Sbjct: 2 QQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQSTEDVDSFADAVIRVKHDVKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ + C+IC D +RDASV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IGP
Sbjct: 62 CHNISDNEVCSICSDPRRDASVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I+SL+ER+E ++E+I A+++T+EG TT YI KLK VK++ +A GI +G E
Sbjct: 122 HDLEIESLVERVEEGTVKEIILALASTMEGDTTNFYISRKLKDTGVKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRTPF 200
>gi|319403644|emb|CBI77229.1| recombination protein RecR [Bartonella rochalimae ATCC BAA-1498]
Length = 201
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 159/201 (79%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE+LI++LARIPG GPRSARRA L+L+KKKE LL PL A+ NKV +C
Sbjct: 1 MSKHIAGPEIEHLIQLLARIPGLGPRSARRAALYLIKKKETLLEPLGSAIQETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDTT+PC+IC D RD S+IIVVED++DLWALER+K ++A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTTNPCSICTDPHRDESIIIVVEDISDLWALERAKFLSARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G
Sbjct: 121 GPDELNIASLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT
Sbjct: 181 GELDYLDDGTLAAALQARTNF 201
>gi|227533728|ref|ZP_03963777.1| recombination protein RecR [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227188712|gb|EEI68779.1| recombination protein RecR [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 216
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG G ++A R + + + + A+++ + CSICGN
Sbjct: 20 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 79
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+
Sbjct: 80 ITDEDPCAICRDKSRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 139
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 140 NIESLLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 199
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ RT L
Sbjct: 200 YADEMTLMKAVEGRTEL 216
>gi|169830252|ref|YP_001716234.1| recombination protein RecR [Candidatus Desulforudis audaxviator
MP104C]
gi|254790796|sp|B1I162|RECR_DESAP RecName: Full=Recombination protein recR
gi|169637096|gb|ACA58602.1| recombination protein RecR [Candidatus Desulforudis audaxviator
MP104C]
Length = 198
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 123/195 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ LAR+PG GP++A+R HLV + L+ A+ +K+ C +C N
Sbjct: 3 YSRSVGRLIEELARLPGIGPKTAQRLAFHLVTAPREAAESLSRAILEARDKLVFCRVCAN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +PC IC DQ RD +I VVE D+ A+E++ LYHVL GSLSPL +GPE++
Sbjct: 63 IADENPCGICRDQNRDHGLICVVERPRDVLAVEKAHGYRGLYHVLNGSLSPLQGVGPEEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ R+ +RE+I A +AT+EG+ TA Y+ L+ ++V++TRLA+G+P+GS+L+Y
Sbjct: 123 NIAALVTRVREGTVREVIVATNATVEGEATALYLARLLRPLNVRVTRLAFGLPVGSDLEY 182
Query: 186 LDDGTIFEAIRSRTV 200
D T+ AI R
Sbjct: 183 ADGRTLARAIEGRRE 197
>gi|226325910|ref|ZP_03801428.1| hypothetical protein COPCOM_03723 [Coprococcus comes ATCC 27758]
gi|225205452|gb|EEG87806.1| hypothetical protein COPCOM_03723 [Coprococcus comes ATCC 27758]
Length = 198
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+R+PG G +SA R H++ ++ + LA + + N V C C
Sbjct: 2 DYYSSQISKLIEELSRLPGIGAKSAGRLAFHIINMPKEQVEQLAATLVDARNNVRYCKQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC ++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDKELCPICASEERDHKTIMVVENSRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTAL 198
>gi|295397255|ref|ZP_06807351.1| recombination protein R [Aerococcus viridans ATCC 11563]
gi|294974502|gb|EFG50233.1| recombination protein R [Aerococcus viridans ATCC 11563]
Length = 199
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI +++PG G ++A R ++ E + A ++ + ++ CS+CGN
Sbjct: 3 YPEPIAKLIDSFSKLPGIGAKTASRLAFFVLDMPEADVLQFASSLVDAKRELRYCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D+ RD S I+VVE V D+ ++ER + + LYHVL G LSP++ GPED+
Sbjct: 63 ITQSDPCEICADENRDRSRILVVEQVRDVVSMERMREYHGLYHVLHGVLSPMEGTGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
IQ L+ R++ +I+E+I A +AT EG+ TA Y+ +K ++++R+AYG+ +GS+++Y
Sbjct: 123 NIQPLLTRLQDDQIKEVIVATNATAEGEATATYLSRLIKPAGIQVSRIAYGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ R +
Sbjct: 183 ADEMTLLRALEGRRDI 198
>gi|269955080|ref|YP_003324869.1| recombination protein RecR [Xylanimonas cellulosilytica DSM 15894]
gi|269303761|gb|ACZ29311.1| recombination protein RecR [Xylanimonas cellulosilytica DSM 15894]
Length = 202
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 121/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + LA+A+ + +V C +CG
Sbjct: 4 VYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLAADAGDVRRLADALIEVKARVRFCEVCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C +C+D +R VI VVE+ D+ A+ER++ YHVLGG+++P++ +GP+D
Sbjct: 64 NVAEAERCRVCVDPRRSDDVICVVEEPKDVVAIERTREFRGRYHVLGGAINPIENVGPDD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ +++E+I A +EG+ TA Y+ + + V ++RLA G+P+G +L+
Sbjct: 124 LRIKDLLSRLADGRVQEVILATDPNVEGEATATYLARLIGPMGVTVSRLASGLPVGGDLE 183
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R V
Sbjct: 184 YADEVTLGRAFEGRRV 199
>gi|327313231|ref|YP_004328668.1| recombination protein RecR [Prevotella denticola F0289]
gi|326944473|gb|AEA20358.1| recombination protein RecR [Prevotella denticola F0289]
Length = 202
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 133/199 (66%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +E ++ +++PG G ++A R LHL+++ + AEA+ + + V C +
Sbjct: 2 QQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQPADEVDGFAEAVVRVKHDVKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ +D C+IC D +RDAS++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +GP
Sbjct: 62 CHNISDSDVCSICSDPRRDASLVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I SL++R++ ++E+I A+++T+EG TT Y+ KLKG +VK++ +A GI +G E
Sbjct: 122 HDLEIDSLVKRVDEGGVKEVILALASTMEGDTTNFYLSRKLKGKNVKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRTPF 200
>gi|169825653|ref|YP_001695811.1| recombination protein RecR [Lysinibacillus sphaericus C3-41]
gi|168990141|gb|ACA37681.1| Recombination protein RecR [Lysinibacillus sphaericus C3-41]
Length = 184
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 123/184 (66%)
Query: 18 ARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICID 77
++PG GP++A R ++ KE+ + ++A+ + + CS+CGN+ DPC IC D
Sbjct: 1 MKLPGIGPKTAARLAFFVLSMKEEDVLSFSKALIDAKRNLSYCSVCGNITDVDPCHICTD 60
Query: 78 QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVK 137
+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPEDI + SL+ R+ +
Sbjct: 61 KQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPEDINVASLLVRLHDE 120
Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+ T+ +A+
Sbjct: 121 SVQELILATNSTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEYADEVTLSKAMEG 180
Query: 198 RTVL 201
R L
Sbjct: 181 RREL 184
>gi|294673627|ref|YP_003574243.1| recombination protein RecR [Prevotella ruminicola 23]
gi|294474191|gb|ADE83580.1| recombination protein RecR [Prevotella ruminicola 23]
Length = 205
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 126/200 (63%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
Q++ + +E ++ +++PG G ++A R L ++++ + + A+ + V C
Sbjct: 3 QQQYPSQLLEKAVQEFSKLPGIGRKTALRLVLWMLRQDDSDVTQFTAAVNELKCGVKYCK 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+C N+ TD C IC DQ+RD + + VVE++ D+ A+E ++ N LYHVLGG +SP+D +G
Sbjct: 63 VCHNISDTDICPICADQRRDQTTVCVVENIQDVMAIENTQQFNGLYHVLGGVISPMDGMG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P DI I SLI+R+ ++E+I A+S T+EG TT YI KL +K++ +A GI +G+
Sbjct: 123 PADIEIDSLIQRVGEGTVQEVILALSPTMEGDTTNFYIYRKLAPTGIKVSVIARGIAVGN 182
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 183 ELEYADEVTLGRSITNRTLF 202
>gi|291527023|emb|CBK92609.1| recombination protein RecR [Eubacterium rectale M104/1]
Length = 198
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
EI LI+ L+++PG G ++A+R H++ ++ L++A+ + V C C
Sbjct: 2 DFYSSEISKLIEELSQLPGIGAKTAQRLAFHIINMPKEQAKSLSDAIIDAKEHVRYCKCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC D RD I+VVE+ DL A E++ +YHVLGG++SP+ IGP
Sbjct: 62 YTLTDDELCPICKDAARDHKTIMVVENTRDLVAYEKTGKYEGVYHVLGGAISPMLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIRLKELMVRL-EKDVNEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A++ RT +
Sbjct: 181 EYIDEVTLLRALQGRTEI 198
>gi|256831656|ref|YP_003160383.1| recombination protein RecR [Jonesia denitrificans DSM 20603]
gi|256685187|gb|ACV08080.1| recombination protein RecR [Jonesia denitrificans DSM 20603]
Length = 199
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R H++ + L +A+ + +V C CG
Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHILSADSDDIARLTQAIVEVKRRVRFCDECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +R A VI VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D
Sbjct: 61 NVAEEERCRICRDPRRSAEVICVVEEAKDVVAIERTREFRGKYHVLGGAINPMDNVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ + E+I A+ +EG+ TA Y+ L I +++TRLA G+P+G +L+
Sbjct: 121 LRISELMTRLADGTVTEIILAMDPNVEGEATATYLARLLGAIGIRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R ++
Sbjct: 181 YADEVTLGRAFEGRRLM 197
>gi|238061525|ref|ZP_04606234.1| recombination protein recR [Micromonospora sp. ATCC 39149]
gi|237883336|gb|EEP72164.1| recombination protein recR [Micromonospora sp. ATCC 39149]
Length = 197
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R H++ + LA A+ + + V C+ C
Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADINRLAGALRKVKDLVRFCTTCY 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++
Sbjct: 61 NVAESEQCRICRDPRRGDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+
Sbjct: 121 LRIRELMTRLSGGAVRELILATDPNTEGEATATYLALMVKPMGISVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGRRA 196
>gi|240146636|ref|ZP_04745237.1| recombination protein RecR [Roseburia intestinalis L1-82]
gi|257201178|gb|EEU99462.1| recombination protein RecR [Roseburia intestinalis L1-82]
gi|291537735|emb|CBL10847.1| Recombinational DNA repair protein (RecF pathway) [Roseburia
intestinalis M50/1]
gi|291537869|emb|CBL10980.1| recombination protein RecR [Roseburia intestinalis XB6B4]
Length = 198
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+ +PG G +SA+R H++ + + L+ A+ + V C C
Sbjct: 2 DYYSSQISKLIQELSSLPGIGAKSAQRLAFHILNMPVEQVEELSSAIVDARKNVRYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC D R+ I+VVED DL A E++ + +YHVL G++SP+ IGP
Sbjct: 62 FTLTDDELCPICKDAGRNHKTIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIKLKELMQRL-QKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT +
Sbjct: 181 EYIDEVTLLRALEGRTEI 198
>gi|254470668|ref|ZP_05084071.1| recombination protein RecR [Pseudovibrio sp. JE062]
gi|211959810|gb|EEA95007.1| recombination protein RecR [Pseudovibrio sp. JE062]
Length = 203
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 123/201 (61%), Positives = 162/201 (80%), Gaps = 1/201 (0%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
+++ G EIE LI++LA++PG GPRSARRA LHLV+KK+QLL PLAEAM ++V +CS
Sbjct: 3 TRRVAGPEIERLIQLLAKLPGLGPRSARRAALHLVQKKDQLLIPLAEAMGVAVDQVGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG VDT+DPC IC D +RD S I+VVEDV+DLWALER+ AV+A YHVLGG+LSPLD IG
Sbjct: 63 ECGTVDTSDPCTICSDPRRDGSTIVVVEDVSDLWALERASAVSAHYHVLGGTLSPLDGIG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMG 180
P+D+ I LIER+E + E+I A++AT+EGQTTAH+I D+L +VK+TRLA+G+P+G
Sbjct: 123 PDDLNISKLIERVESGGVNEVILAVNATVEGQTTAHFITDQLARFENVKVTRLAHGVPVG 182
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ +A+R+RT
Sbjct: 183 GELDYLDEGTLAQALRARTKF 203
>gi|125623229|ref|YP_001031712.1| recombination protein recR [Lactococcus lactis subsp. cremoris
MG1363]
gi|166221946|sp|A2RI71|RECR_LACLM RecName: Full=Recombination protein recR
gi|124492037|emb|CAL96964.1| Recombination protein recR [Lactococcus lactis subsp. cremoris
MG1363]
gi|300069980|gb|ADJ59380.1| recombination protein RecR [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 198
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICG
Sbjct: 2 YYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ +DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++
Sbjct: 62 NLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 122 INVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ +R +
Sbjct: 182 YADEVTLSKAVENRLEI 198
>gi|319779803|ref|YP_004139279.1| recombination protein RecR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317165691|gb|ADV09229.1| recombination protein RecR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 201
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 165/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AMA +KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMAEAADKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT+DPC IC D +RDA IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD I
Sbjct: 61 STCGNVDTSDPCMICTDPRRDAGTIIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + ++SL++R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G
Sbjct: 121 GPEQLNMRSLVDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTAF 201
>gi|218671154|ref|ZP_03520825.1| recombination protein RecR [Rhizobium etli GR56]
Length = 211
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 133/199 (66%), Positives = 167/199 (83%), Gaps = 1/199 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G
Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLEVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAI-RSR 198
ELDYLD+GT+ A+ + R
Sbjct: 181 GELDYLDEGTLAAALRQGR 199
>gi|289643262|ref|ZP_06475387.1| recombination protein RecR [Frankia symbiont of Datisca glomerata]
gi|289506902|gb|EFD27876.1| recombination protein RecR [Frankia symbiont of Datisca glomerata]
Length = 200
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + LA + I +KV C C
Sbjct: 3 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLSADPVDVRRLAATLNEIKDKVRFCRTCF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 63 NVAQAELCRICADHRRDPAQICVVEEPKDVVAVERTREFRGRYHVLGGAINPIGGVGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ LI R+ + ELI A EG+ TA Y+ ++ + +K+TRLA G+PMG +L+
Sbjct: 123 LHIRELIARLADGTVTELILATDPNTEGEVTASYLARQIAPMGLKVTRLASGLPMGGDLE 182
Query: 185 YLDDGTIFEAIRSRTV 200
+ D+ T+ A R V
Sbjct: 183 WADEVTLGRAFEGRRV 198
>gi|238922754|ref|YP_002936267.1| recombinational DNA repair protein [Eubacterium rectale ATCC 33656]
gi|238874426|gb|ACR74133.1| recombinational DNA repair protein [Eubacterium rectale ATCC 33656]
gi|291526534|emb|CBK92121.1| recombination protein RecR [Eubacterium rectale DSM 17629]
Length = 198
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
EI LI+ L+++PG G ++A+R H++ ++ L++A+ + V C C
Sbjct: 2 DFYSSEISKLIEELSQLPGIGAKTAQRLAFHIINMPKEQAKSLSDAIIDAKEHVRYCKCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC D RD I+VVE+ DL A E++ +YHVLGG++SP+ IGP
Sbjct: 62 YTLTDDELCPICKDAARDHKTIMVVENTRDLVAYEKTGKYEGVYHVLGGAISPMLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIRLKELMVRL-EKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A++ RT +
Sbjct: 181 EYIDEVTLLRALQGRTEI 198
>gi|307544647|ref|YP_003897126.1| recombination protein RecR [Halomonas elongata DSM 2581]
gi|307216671|emb|CBV41941.1| recombination protein RecR [Halomonas elongata DSM 2581]
Length = 201
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 115/196 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ L++ +PG GP++A+R +HL+++ + LAE + +V C C
Sbjct: 3 FSPLVDRLMESFRVLPGVGPKTAQRMAMHLLERDREGGQRLAEVLGVALEQVGYCQRCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ CA+C +RD SV+ VVE ADL A+E ++ Y VL G LSPLD IGPEDI
Sbjct: 63 LTEETICALCKSDRRDDSVLCVVESPADLLAIEEARGYRGRYFVLHGHLSPLDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+ + E+I A + T+EG+ TAHYI +L+ VK++RLAYG+PMG EL+Y
Sbjct: 123 GLDQLDARVAEDGVEEVILATNPTVEGEATAHYIASQLEPRGVKLSRLAYGVPMGGELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A R
Sbjct: 183 VDGGTLSRAFNGRLPF 198
>gi|325833721|ref|ZP_08166136.1| recombination protein RecR [Eggerthella sp. HGA1]
gi|325485261|gb|EGC87731.1| recombination protein RecR [Eggerthella sp. HGA1]
Length = 198
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I+ L+ L R+PG GP+SA+R ++ + L++A+A + V CS C
Sbjct: 2 YAAPSIQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSDAIAEVKETVRFCSRCF 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP++
Sbjct: 62 NYAEDDLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L+
Sbjct: 122 LRIAQLMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ AI +R L
Sbjct: 182 FADEVTLGRAIEARRPL 198
>gi|28493676|ref|NP_787837.1| recombination protein RecR [Tropheryma whipplei str. Twist]
gi|73621529|sp|Q83MQ8|RECR_TROWT RecName: Full=Recombination protein recR
gi|28476718|gb|AAO44806.1| recombination protein [Tropheryma whipplei str. Twist]
Length = 198
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 127/197 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +++LI+ L ++PG GP+SA+R T +++ + L+E + ++ +V C +CG
Sbjct: 1 MYVRIVQDLIRELGKLPGIGPKSAQRITFFILQNPSFDIDRLSETLQSVRKQVQFCKVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC D +RD VI VVE+ D+ A+E+++ + LYHVLGG++SP+D +GP+D
Sbjct: 61 NFSEEDECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ I E++ A +EG+ TA YI + + +++++LA G+P+GS+L+
Sbjct: 121 LNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R +
Sbjct: 181 YADEITLGRALEGRQYI 197
>gi|323127674|gb|ADX24971.1| recombination protein RecR [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 198
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG
Sbjct: 2 FYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDGKVTEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|302336479|ref|YP_003801686.1| DNA replication and repair protein RecR [Olsenella uli DSM 7084]
gi|301320319|gb|ADK68806.1| DNA replication and repair protein RecR [Olsenella uli DSM 7084]
Length = 207
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 123/195 (63%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G+ ++ L+ L R+PG GP+SA+R L++ + L+ A+ + +V C +C +
Sbjct: 13 GRALQRLLDELGRLPGIGPKSAQRIAYWLLEADVEAARRLSGAIMQVKQQVHFCPVCFSY 72
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T D C +C D RD I VV + D+ A+ER+ A + LYHVLGG +SP+D+IGP+ +
Sbjct: 73 ATRDTCDVCADLSRDRGTICVVSEPRDVSAIERTGAYHGLYHVLGGVISPMDKIGPDQLH 132
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L++R+ + ++E+I A + +EG+TTA Y+ ++ + V ++RLA G+P+G +L+Y
Sbjct: 133 VKELLQRLADESVKEVILATNPDVEGETTATYLSRVIRPLGVAVSRLASGLPVGGDLEYA 192
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ AI +R +
Sbjct: 193 DEVTLGRAIEARRTI 207
>gi|114320664|ref|YP_742347.1| recombination protein RecR [Alkalilimnicola ehrlichii MLHE-1]
gi|122311667|sp|Q0A8I0|RECR_ALHEH RecName: Full=Recombination protein recR
gi|114227058|gb|ABI56857.1| recombination protein RecR [Alkalilimnicola ehrlichii MLHE-1]
Length = 199
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 114/194 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+ LI+ L +PG GPRSA+R HL+++ LA A+ ++V C C
Sbjct: 3 YSPLIDQLIESLRCLPGVGPRSAQRMAFHLLQRDRDGGRRLATAIREAMDQVGHCRQCRV 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C +C +RD S++ VVE AD++ALE++ LY VL G LSPLD +GPE +
Sbjct: 63 LTEEPVCGLCASDRRDRSLLCVVEGPADVFALEQATDFRGLYFVLMGRLSPLDGVGPEAL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+ +++E+I A S T+EG+ T+HYI + V+ TR+A+G+PMG EL+Y
Sbjct: 123 GLDRLEARLAEGEVQEVILATSPTVEGEATSHYIAELAHQRGVRTTRIAHGVPMGGELEY 182
Query: 186 LDDGTIFEAIRSRT 199
+D GT+ A R
Sbjct: 183 VDSGTLSHAFAGRR 196
>gi|251782870|ref|YP_002997173.1| recombination protein RecR [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391500|dbj|BAH81959.1| recombination protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 198
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG
Sbjct: 2 FYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDGKVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|167762859|ref|ZP_02434986.1| hypothetical protein BACSTE_01222 [Bacteroides stercoris ATCC
43183]
gi|167699199|gb|EDS15778.1| hypothetical protein BACSTE_01222 [Bacteroides stercoris ATCC
43183]
Length = 205
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ + A+ + ++V C
Sbjct: 1 MNGQYPSTLLEKAVNEFAKLPGIGRKTAMRLVLHLLRQDTAAVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLEIESLVQRVAAGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRTPF 201
>gi|116495713|ref|YP_807447.1| recombination protein RecR [Lactobacillus casei ATCC 334]
gi|191639201|ref|YP_001988367.1| recombination protein RecR [Lactobacillus casei BL23]
gi|301067268|ref|YP_003789291.1| recombinational DNA repair protein [Lactobacillus casei str. Zhang]
gi|122262885|sp|Q035W7|RECR_LACC3 RecName: Full=Recombination protein recR
gi|238693007|sp|B3W9Z0|RECR_LACCB RecName: Full=Recombination protein recR
gi|116105863|gb|ABJ71005.1| DNA replication and repair protein RecR [Lactobacillus casei ATCC
334]
gi|190713503|emb|CAQ67509.1| Recombination protein recR [Lactobacillus casei BL23]
gi|300439675|gb|ADK19441.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus
casei str. Zhang]
gi|327383279|gb|AEA54755.1| Recombination protein recR [Lactobacillus casei LC2W]
gi|327386462|gb|AEA57936.1| Recombination protein recR [Lactobacillus casei BD-II]
Length = 199
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG G ++A R + + + + A+++ + CSICGN
Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+
Sbjct: 63 ITDEDPCAICRDKSRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIESLLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ RT L
Sbjct: 183 YADEMTLMKAVEGRTEL 199
>gi|153806693|ref|ZP_01959361.1| hypothetical protein BACCAC_00964 [Bacteroides caccae ATCC 43185]
gi|149131370|gb|EDM22576.1| hypothetical protein BACCAC_00964 [Bacteroides caccae ATCC 43185]
Length = 205
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSVLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTEICQICANPQRDASTICVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVSEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|257790373|ref|YP_003180979.1| recombination protein RecR [Eggerthella lenta DSM 2243]
gi|257474270|gb|ACV54590.1| recombination protein RecR [Eggerthella lenta DSM 2243]
Length = 198
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I+ L+ L R+PG GP+SA+R ++ + L+EA+A + V CS C
Sbjct: 2 YAAPSIQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSEAIAEVKETVRFCSRCF 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP++
Sbjct: 62 NYAEDDLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L+
Sbjct: 122 LRIAQLMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ AI +R L
Sbjct: 182 FADEVTLGRAIEARRPL 198
>gi|145592781|ref|YP_001157078.1| recombination protein RecR [Salinispora tropica CNB-440]
gi|145302118|gb|ABP52700.1| DNA replication and repair protein RecR [Salinispora tropica
CNB-440]
Length = 197
Score = 294 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R H++ + LA A+ + V C+ C
Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLAGALRKVKELVRFCTSCY 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++
Sbjct: 61 NVAESEQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+
Sbjct: 121 LRVRELLTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGIAVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGRRT 196
>gi|170780615|ref|YP_001708947.1| recombination protein RecR [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155183|emb|CAQ00283.1| putative recomination protein RecR [Clavibacter michiganensis
subsp. sepedonicus]
Length = 199
Score = 294 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 123/196 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C+ICG
Sbjct: 1 MYEGIVQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAEVLTVVRDKVRFCAICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +R + I VVE+ D+ A+ER++ LYHVLGG++SP+D IGP+D
Sbjct: 61 NVSEEETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ + E+I A +EG+ TA Y+ L D+++TRLA G+P+G +L+
Sbjct: 121 LRIRQLMQRLADATVTEVIIATDPNLEGEATATYLSRLLSTFDIRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R +
Sbjct: 181 YADEVTLGRAFEGRRL 196
>gi|283782640|ref|YP_003373394.1| recombination protein RecR [Gardnerella vaginalis 409-05]
gi|297243103|ref|ZP_06927041.1| recombination protein RecR [Gardnerella vaginalis AMD]
gi|283442128|gb|ADB14594.1| recombination protein RecR [Gardnerella vaginalis 409-05]
gi|296889314|gb|EFH28048.1| recombination protein RecR [Gardnerella vaginalis AMD]
Length = 202
Score = 294 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 119/199 (59%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
I LI+ +++PG GP+ A+R +L+ ++ + L +A+ N+ V C
Sbjct: 3 NSSSYDGAIGRLIEAFSKLPGIGPKGAQRIAFYLLSSSDKDVQELIDAINNMKESVRFCD 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+CGNV PC +C D +RD S I VVE+ D+ ++ER+ + +YHVLGG+++P+ +G
Sbjct: 63 VCGNVCEQSPCIVCADPRRDHSKICVVEEPKDIMSIERTHEYSGVYHVLGGAINPMANVG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P D+ I L+ER++ K++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G
Sbjct: 123 PGDLAITQLLERLKDAKVQEIILALDPDIEGEATVTYLARLLDPLGIKVTRLASGLPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A R
Sbjct: 183 DLEYADEITLGRAFSGRQS 201
>gi|310819968|ref|YP_003952326.1| Recombination protein [Stigmatella aurantiaca DW4/3-1]
gi|309393040|gb|ADO70499.1| Recombination protein [Stigmatella aurantiaca DW4/3-1]
Length = 197
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+T + L+ LA++PG G ++A+R H+++ + L++A+ + KV LC+ C
Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRAPSEYAVDLSQAIREVKEKVHLCTRCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ T+ C C D +RD V+ VVE ADL ALER++ YHVL G LSPL+ IGP+
Sbjct: 61 SLTDTELCGFCRDSRRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGIGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ER+ K+ E+I A + +EG+ T+ Y+M LK + ++++R+A G+PMG +L+
Sbjct: 121 LRIRELLERLADSKVEEIILATNPDVEGEATSLYLMRLLKPLGLRVSRIAQGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +A+ +R L
Sbjct: 181 YADQATLAKALSARREL 197
>gi|22536930|ref|NP_687781.1| recombination protein RecR [Streptococcus agalactiae 2603V/R]
gi|25010841|ref|NP_735236.1| recombination protein RecR [Streptococcus agalactiae NEM316]
gi|76787474|ref|YP_329513.1| recombination protein RecR [Streptococcus agalactiae A909]
gi|76798440|ref|ZP_00780679.1| recombination protein RecR [Streptococcus agalactiae 18RS21]
gi|77406741|ref|ZP_00783778.1| recombination protein RecR [Streptococcus agalactiae H36B]
gi|77409082|ref|ZP_00785798.1| recombination protein RecR [Streptococcus agalactiae COH1]
gi|77412466|ref|ZP_00788769.1| recombination protein RecR [Streptococcus agalactiae CJB111]
gi|77414688|ref|ZP_00790822.1| recombination protein RecR [Streptococcus agalactiae 515]
gi|73621516|sp|Q8E641|RECR_STRA3 RecName: Full=Recombination protein recR
gi|73621517|sp|Q8E0G7|RECR_STRA5 RecName: Full=Recombination protein recR
gi|123602003|sp|Q3K1U0|RECR_STRA1 RecName: Full=Recombination protein recR
gi|22533782|gb|AAM99653.1|AE014226_13 recombination protein RecR [Streptococcus agalactiae 2603V/R]
gi|23095220|emb|CAD46430.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562531|gb|ABA45115.1| recombination protein RecR [Streptococcus agalactiae A909]
gi|76586202|gb|EAO62721.1| recombination protein RecR [Streptococcus agalactiae 18RS21]
gi|77159266|gb|EAO70443.1| recombination protein RecR [Streptococcus agalactiae 515]
gi|77161484|gb|EAO72492.1| recombination protein RecR [Streptococcus agalactiae CJB111]
gi|77172299|gb|EAO75452.1| recombination protein RecR [Streptococcus agalactiae COH1]
gi|77174646|gb|EAO77478.1| recombination protein RecR [Streptococcus agalactiae H36B]
gi|319744790|gb|EFV97130.1| recombination protein R [Streptococcus agalactiae ATCC 13813]
Length = 198
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD SVI+VVED D+ A+E+ + N LYHVL G +SP++ I P+D
Sbjct: 62 NLTDDDPCLICTDKTRDQSVILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|94985613|ref|YP_604977.1| recombination protein RecR [Deinococcus geothermalis DSM 11300]
gi|166221935|sp|Q1IY76|RECR_DEIGD RecName: Full=Recombination protein recR
gi|94555894|gb|ABF45808.1| recombination protein RecR [Deinococcus geothermalis DSM 11300]
Length = 222
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L+R+PG GP+SA+R +L ++ + + LA A+ + C +C N
Sbjct: 3 YPPSLVGLIRELSRLPGIGPKSAQRLAFYLFEQPREDIERLAGAILEAKRDLHTCPVCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD SVI VVE+ D+ A+ERS LYHVL G+LSP++ +GP+ +
Sbjct: 63 ITDAERCDVCSDPTRDQSVICVVEEPGDVIAIERSGEYRGLYHVLHGALSPMNGVGPDRL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R++ E+I A T+EG TA Y+ L+ + ++R+AYG+P+G L+Y
Sbjct: 123 QIRPLLPRVQDG--MEVILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGALEY 180
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 181 ADEVTLGRALSGRRR 195
>gi|292493701|ref|YP_003529140.1| recombination protein RecR [Nitrosococcus halophilus Nc4]
gi|291582296|gb|ADE16753.1| recombination protein RecR [Nitrosococcus halophilus Nc4]
Length = 199
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ G + L++ L +PG GP+SA+R HL++ + LA+A+ K+ C C
Sbjct: 2 NLFGPSLGRLVEALRCLPGVGPKSAQRMAFHLLESDREGGQRLAQALLEALGKITHCQAC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TD C +C D QRD S + VVE +D+ A+E++ A +Y VL G LSPLD IGPE
Sbjct: 62 RILSETDLCPLCADPQRDHSQLCVVEMPSDVQAIEQATAYPGVYFVLMGHLSPLDGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+G+ L +R++ +IRELI A + T+EG+ TAHY+ + + + ++R+A+G+P+G EL
Sbjct: 122 ALGMDLLAKRLDTDQIRELILATNLTVEGEATAHYLSELARSRGITVSRIAHGVPLGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+++D GT+ A + R L
Sbjct: 182 EFVDRGTLSHAFQGRHHL 199
>gi|226355493|ref|YP_002785233.1| recombination protein RecR [Deinococcus deserti VCD115]
gi|259563690|sp|C1D0V5|RECR_DEIDV RecName: Full=Recombination protein recR
gi|226317483|gb|ACO45479.1| putative recombination protein RecR [Deinococcus deserti VCD115]
Length = 198
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 115/195 (58%), Gaps = 2/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + C +C N
Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLAGALLAAKRDLHTCPVCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD ++I VVE+ D+ A+ERS LYHVL G LSP++ +GPE +
Sbjct: 63 ITDAERCDVCSDPSRDQNLICVVEEPGDVIAIERSGEYRGLYHVLHGVLSPMNGVGPEKL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R++ + E+I A T+EG TA Y+ L+ + ++R+AYG+P+G L+Y
Sbjct: 123 HIKPLLPRVQEGQ--EIILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGALEY 180
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 181 ADEVTLGRALTGRQR 195
>gi|284049058|ref|YP_003399397.1| recombination protein RecR [Acidaminococcus fermentans DSM 20731]
gi|283953279|gb|ADB48082.1| recombination protein RecR [Acidaminococcus fermentans DSM 20731]
Length = 198
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 126/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + L + L R+PG G +SA R H++ K + + LA A+ ++ + V LC C ++
Sbjct: 5 KPLARLHEQLRRLPGIGSKSALRLAYHVLDMKREDVEELARALLDVKDHVHLCRQCFDLC 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++RD S++ VVE D+ A+ER++ LYHVL G LSPLD +GP+ + I
Sbjct: 65 EGELCEICQDEKRDRSLVCVVEQPQDVAAMERTRGYQGLYHVLHGVLSPLDGVGPDQLKI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ ++E+I A ++ +EG+ TA+Y+ ++ +K++R+A+G+P+G +L+Y D
Sbjct: 125 RELLLRLQKGTVKEVIIATNSDVEGEATANYLAGLIRPTGIKVSRIAHGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+++A+ +R +
Sbjct: 185 ELTLYKALENRREI 198
>gi|298345778|ref|YP_003718465.1| recombination protein RecR [Mobiluncus curtisii ATCC 43063]
gi|304390522|ref|ZP_07372475.1| recombination protein R [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315654367|ref|ZP_07907275.1| recombination protein R [Mobiluncus curtisii ATCC 51333]
gi|315657728|ref|ZP_07910608.1| recombination protein R [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235839|gb|ADI66971.1| recombination protein RecR [Mobiluncus curtisii ATCC 43063]
gi|304326278|gb|EFL93523.1| recombination protein R [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491402|gb|EFU81019.1| recombination protein R [Mobiluncus curtisii ATCC 51333]
gi|315491525|gb|EFU81136.1| recombination protein R [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 200
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 120/199 (60%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+I + +++LI L ++PG GP+SA+R ++ E + L EA+ ++ KV C +
Sbjct: 2 NQIFTEALQDLIDALGKMPGVGPKSAQRIAFWVLSADEADIKRLTEALTSVKEKVHFCEV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+ CAIC D +RD S+I VVE D+ +LER++ LYHVLGG+L P++ IGP
Sbjct: 62 CGNITEHPVCAICQDSRRDQSLICVVEQATDIVSLERTRMYRGLYHVLGGALDPINGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + I L+ R++ I+E+I A EG+ TA Y+ L I + +RLA G+P+G +
Sbjct: 122 DQLRIAGLMTRLQDSAIKEVIIATDPNTEGEATAAYLARMLATIGIPASRLASGLPVGGD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ R L
Sbjct: 182 LEYADEVTLGRALEGRRRL 200
>gi|295692242|ref|YP_003600852.1| recombination protein recr [Lactobacillus crispatus ST1]
gi|295030348|emb|CBL49827.1| Recombination protein recR [Lactobacillus crispatus ST1]
Length = 199
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI ++PG G ++A R + + +Q + A+++ + + C ICGN
Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPDQDVDDFAKSLVQVKKDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I
Sbjct: 63 ITEKDVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKNDAVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTAL 199
>gi|148272080|ref|YP_001221641.1| recombination protein RecR [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|172047219|sp|A5CPD8|RECR_CLAM3 RecName: Full=Recombination protein recR
gi|147830010|emb|CAN00938.1| putative recombination protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 199
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 123/196 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C+ICG
Sbjct: 1 MYEGIVQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAEVLTVVRDKVRFCAICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +R + I VVE+ D+ A+ER++ LYHVLGG++SP+D IGP+D
Sbjct: 61 NVSEKETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R+ + E+I A +EG+ TA Y+ L D+++TRLA G+P+G +L+
Sbjct: 121 LRIRQLMQRLADATVTEVIIATDPNLEGEATATYLSRLLSTFDIRVTRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R +
Sbjct: 181 YADEVTLGRAFEGRRL 196
>gi|15602071|ref|NP_245143.1| recombination protein RecR [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431793|sp|P57826|RECR_PASMU RecName: Full=Recombination protein recR
gi|12720430|gb|AAK02290.1| RecR [Pasteurella multocida subsp. multocida str. Pm70]
Length = 200
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C
Sbjct: 3 TSPLLEHLIESLRCLPGVGPKSAQRMAYHLLQRNRNGGMELARALTEAMSKIGHCSHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEEVCTICNNPRRQHSGLLCVVEQPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG TA+YI + ++K+TR+A+GIP+G EL+
Sbjct: 123 IGLHLLQKRLQEESFHEVILATNPTVEGDATANYIAELCMQQNIKVTRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R L
Sbjct: 183 MVDGTTLTHSFLGRRQL 199
>gi|261867515|ref|YP_003255437.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293391392|ref|ZP_06635726.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|261412847|gb|ACX82218.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951926|gb|EFE02045.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 200
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENLI+ L +PG GP+SA+R HL+++ LA+ + +K+ C C
Sbjct: 3 TSPLLENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDVCNICSNPRRQNSGLLCVVETPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG TA+YI + +VK++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQTESFNEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 MVDGTTLTHSFLGRREI 199
>gi|261345762|ref|ZP_05973406.1| recombination protein RecR [Providencia rustigianii DSM 4541]
gi|282566251|gb|EFB71786.1| recombination protein RecR [Providencia rustigianii DSM 4541]
Length = 199
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDICNICDNPRRQQNGLICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSSETITEVILATNPTVEGEATANYIGQMCAQYGVVASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 MVDGTTLSHSLAGRQRL 199
>gi|158318301|ref|YP_001510809.1| recombination protein RecR [Frankia sp. EAN1pec]
gi|158113706|gb|ABW15903.1| recombination protein RecR [Frankia sp. EAN1pec]
Length = 199
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 116/195 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++++I L ++PG GP+SA+R HL+ + LA A+ + KV C IC
Sbjct: 1 MYEGIVQDVIDELGQLPGIGPKSAQRIAFHLLAADPADVRRLASALTELKEKVRFCRICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 61 NVAQSELCRICSDPRRDPTSICVVEESKDVVAIERTREFRGKYHVLGGAINPIGGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ + E+I A EG+ TA Y+ ++ + + +TRLA G+PMG +L+
Sbjct: 121 LHIRELVARLADGTVTEIILATDPNTEGEVTASYLARQIGPMGLTVTRLASGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
+ D+ T+ A R
Sbjct: 181 WADEVTLGRAFEGRR 195
>gi|229816111|ref|ZP_04446429.1| hypothetical protein COLINT_03164 [Collinsella intestinalis DSM
13280]
gi|229808311|gb|EEP44095.1| hypothetical protein COLINT_03164 [Collinsella intestinalis DSM
13280]
Length = 198
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 123/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L R+PG GP+SA+R HL++ + LA+A+ + ++V CS C N
Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYHLLEADAEEARRLADAILMVKSEVHFCSRCFNYA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D CAIC D RD I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + +
Sbjct: 65 TGDECAICEDSSRDRGRICVVGEPRDVSAIERTGSYRGLYHVLGGVISPMDKIGPEQLHV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + I E+I A + IEG+TTA Y+ +K + + +TRLA G+P+G +L+Y D
Sbjct: 125 RELLARLGTEDIEEVIIATNPNIEGETTASYLARTIKPLGITVTRLASGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI +R L
Sbjct: 185 ELTLGRAIEARRAL 198
>gi|163867526|ref|YP_001608725.1| recombination protein RecR [Bartonella tribocorum CIP 105476]
gi|189029353|sp|A9IMX8|RECR_BART1 RecName: Full=Recombination protein recR
gi|161017172|emb|CAK00730.1| recombination protein RecR [Bartonella tribocorum CIP 105476]
Length = 201
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI+ILAR+PG GPRSARRA LHL+KKKE LL PL A+ KV +C
Sbjct: 1 MSKYIAGPEIERLIQILARLPGLGPRSARRAALHLIKKKETLLEPLGAAVQAAIEKVGIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTIDPCSICTDSRRDDTTIIVVEDIADLWALERAKTLAARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I +LI+R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNIATLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFPVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAAVQARTNL 201
>gi|199599029|ref|ZP_03212436.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus
rhamnosus HN001]
gi|258509259|ref|YP_003172010.1| recombination protein RecR [Lactobacillus rhamnosus GG]
gi|258540443|ref|YP_003174942.1| recombination protein RecR [Lactobacillus rhamnosus Lc 705]
gi|199590065|gb|EDY98164.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus
rhamnosus HN001]
gi|257149186|emb|CAR88159.1| Recombination protein recR [Lactobacillus rhamnosus GG]
gi|257152119|emb|CAR91091.1| Recombination protein recR [Lactobacillus rhamnosus Lc 705]
gi|259650541|dbj|BAI42703.1| recombination protein RecR [Lactobacillus rhamnosus GG]
Length = 199
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG G ++A R + + + + A+++ + CSICGN
Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+
Sbjct: 63 ITDEDPCAICRDKNRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL++R++ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIESLLKRLKKNTAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ RT L
Sbjct: 183 YADEMTLMKAVEGRTEL 199
>gi|257062980|ref|YP_003142652.1| DNA replication and repair protein RecR [Slackia heliotrinireducens
DSM 20476]
gi|256790633|gb|ACV21303.1| DNA replication and repair protein RecR [Slackia heliotrinireducens
DSM 20476]
Length = 198
Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 119/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I+ L+ L R+PG GP+SA+R L+ + LA+A+ + + V CS C N
Sbjct: 3 SAPAIQRLLDELERMPGVGPKSAQRIAYWLLNADRETAMRLADAIIEVKDTVHFCSRCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + RD + VV + D+ A+ER+ A LYHVLGG+LSP++ IGP+D+
Sbjct: 63 YAEGDTCEICASKSRDERTLCVVSEPRDISAIERTSAYRGLYHVLGGALSPMEGIGPDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ + I E++ A + +EG+TTA Y+ +K + ++++RLA G+P+G +L++
Sbjct: 123 KITELMARLATEDIAEVVLATNPNVEGETTATYLARIIKPLGIQVSRLASGLPVGGDLEF 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI +R L
Sbjct: 183 ADEVTLGRAIEARRTL 198
>gi|302336634|ref|YP_003801840.1| recombination protein RecR [Spirochaeta smaragdinae DSM 11293]
gi|301633819|gb|ADK79246.1| recombination protein RecR [Spirochaeta smaragdinae DSM 11293]
Length = 195
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++E LI+ L+R+PG G +SA R +L+K + LAE + + ++ C +CGN
Sbjct: 2 NQLERLIRSLSRLPGVGRKSAARIAHYLLKADSAFVTRLAEEIGTLKERIHPCPVCGNFT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C++C D +RD + I VVE+ D+ +E + N L+HVLGG+++P++ +GP D+ I
Sbjct: 62 EDELCSVCSDPRRDGTQICVVEEPQDVATIESTGEYNGLFHVLGGAINPMNGVGPSDLSI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R ++E+I A + T+EG TTA Y+ + LK ++++RLA G+P+G +L+Y D
Sbjct: 122 DKLVKRASEGTVKEIIIATNPTVEGDTTALYLQNILKERPIEVSRLASGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ + R RT L
Sbjct: 182 KLTLARSFRGRTKL 195
>gi|298253201|ref|ZP_06976993.1| recombination protein RecR [Gardnerella vaginalis 5-1]
gi|297532596|gb|EFH71482.1| recombination protein RecR [Gardnerella vaginalis 5-1]
Length = 202
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 120/199 (60%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
I +LI+ +++PG GP+ A+R +L+ ++ + L +A+ N+ V C
Sbjct: 3 NSSSYDGAIGHLIEAFSKLPGIGPKGAQRIAFYLLSSSDKDVQELIDAINNMKESVRFCD 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+CGNV PC +C D +RD S I VVE+ D+ ++ER+ + +YHVLGG+++P+ +G
Sbjct: 63 VCGNVCEQSPCIVCADPRRDHSKICVVEEPKDIMSIERTHEYSGVYHVLGGAINPMANVG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P D+ I L+ER++ K++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G
Sbjct: 123 PGDLAITQLLERLKDAKVQEIILALDPDIEGEATVTYLARLLDPLGIKVTRLASGLPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ A R
Sbjct: 183 DLEYADEITLGRAFSGRQS 201
>gi|237736576|ref|ZP_04567057.1| recombination protein recR [Fusobacterium mortiferum ATCC 9817]
gi|229420438|gb|EEO35485.1| recombination protein recR [Fusobacterium mortiferum ATCC 9817]
Length = 197
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H+++ +E+ + EA+ + C CG
Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSAARLAFHVLEMREEQVESFIEALREAKEVIKRCPKCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C IC ++ RD+ I VVED D+ + E+ +YH+LGG ++PL+ I P+
Sbjct: 61 DFCENDLCDICSNELRDSHTICVVEDSRDVISFEKMGKYKGMYHILGGKIAPLNGITPDK 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ER+ V ++ E+I A++ +EG+TTA Y+ LK +K+T++A GIPMG ++
Sbjct: 121 LNIKSLLERVTVDEVEEVILALNPDLEGETTALYLTKLLKPFGIKVTKIASGIPMGGNIE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D TI A+ R
Sbjct: 181 FADSATISRALEGRQE 196
>gi|331003028|ref|ZP_08326540.1| recombination protein recR [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330413072|gb|EGG92447.1| recombination protein recR [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 198
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I LI+ L+++PG G +SA+R H++ + + L++A+ + V C C
Sbjct: 2 DYYSSHISKLIEELSKLPGVGAKSAQRLAFHIIGMSSEQVDSLSKAIKDAKGNVNYCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC ++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 FTLTDGEVCPICASEKRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI+R+E + E+I A ++T+EG+TTA YI +K ++++R+A G+P+G +L
Sbjct: 122 DIKLKELIKRLES-DVNEVIIATNSTLEGETTAMYIAKLIKPTGIEVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R +L
Sbjct: 181 EYIDEVTLLRALEGRRLL 198
>gi|322412134|gb|EFY03042.1| recombination protein RecR [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 198
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDGKVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|257057602|ref|YP_003135434.1| recombination protein RecR [Saccharomonospora viridis DSM 43017]
gi|256587474|gb|ACU98607.1| DNA replication and repair protein RecR [Saccharomonospora viridis
DSM 43017]
Length = 198
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ L L E + + V C +CG
Sbjct: 1 MYEGVVQDLIDELGRLPGIGPKSAQRIAFHLLASDPADLARLQEVLGKVREGVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSERERCRICSDPRRDTSVICVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ I+ L+ RI ++ E+I A EG+ TA Y++ LK + +TRLA G+PMG +L
Sbjct: 121 LRIKELLSRIGADEVSEVIIATDPNTEGEATATYLVRMLKDFPGLTVTRLASGLPMGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D+ T+ A+ R L
Sbjct: 181 EFADELTLGRALSGRRAL 198
>gi|239630118|ref|ZP_04673149.1| recombination protein recR [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239527730|gb|EEQ66731.1| recombination protein recR [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 199
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG G ++A R + + + + A+++ + CSICGN
Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC D+ RD S I+VVE D+ ++R++ + LYHVL G LSP++ GPED+
Sbjct: 63 ITDEDPCAICRDKSRDQSTILVVEQPKDVMIIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIESLLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ RT L
Sbjct: 183 YADEMTLMKAVEGRTEL 199
>gi|328956230|ref|YP_004373563.1| DNA replication and repair protein RecR [Coriobacterium glomerans
PW2]
gi|328456554|gb|AEB07748.1| DNA replication and repair protein RecR [Coriobacterium glomerans
PW2]
Length = 198
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 77/194 (39%), Positives = 121/194 (62%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L R+PG GP+SA+R HL++ + LA A+ + +V C+ C N
Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYHLLEADPEQARRLAAAIIQVKTEVHFCARCFNYA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T C+IC D RD + I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + +
Sbjct: 65 TEQECSICSDTSRDRTRICVVSEPRDVSAIERTGSYRGLYHVLGGVISPMDKIGPEQLHV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + I ELI A + IEG+TTA Y+ +K + V ++RLA G+P+G +L+Y D
Sbjct: 125 RELLARLGAEDIEELIIATNPNIEGETTASYLARAIKPLGVCVSRLASGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI +R L
Sbjct: 185 ELTLGRAIEARRSL 198
>gi|313885438|ref|ZP_07819188.1| recombination protein RecR [Eremococcus coleocola ACS-139-V-Col8]
gi|312619168|gb|EFR30607.1| recombination protein RecR [Eremococcus coleocola ACS-139-V-Col8]
Length = 198
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 121/196 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R +++ E+ + A+ + N+ ++ CS+CGN
Sbjct: 3 YPAPIAKLINSFTKLPGIGSKTAARLAFYVLDMPERDVLEFAQNLINVKRELTYCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D R I+VVED D+ ++ER + N LYHVL G LSP++ GP+D+
Sbjct: 63 ITDSDPCPICQDPGRSHKEILVVEDARDVMSMERMQEYNGLYHVLHGVLSPMEGTGPDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R+E I E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIASLIKRLEDPTIEEVIIATNATAEGEATAMYLARLIKPAGIKVTRLAHGLAVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T++ AI R L
Sbjct: 183 ADEMTLYRAIEGRREL 198
>gi|254502115|ref|ZP_05114266.1| recombination protein RecR [Labrenzia alexandrii DFL-11]
gi|222438186|gb|EEE44865.1| recombination protein RecR [Labrenzia alexandrii DFL-11]
Length = 202
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 123/200 (61%), Positives = 166/200 (83%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QK++ G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PL+EAM + +CS
Sbjct: 3 QKQVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLSEAMGIAVRDIGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
+CG VDT+DPC IC D++RD SV++VVEDV+DLWALER+ AVNA YHVLGG+LSPLD +G
Sbjct: 63 VCGTVDTSDPCTICSDEKRDPSVLVVVEDVSDLWALERASAVNARYHVLGGTLSPLDGVG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P+D+ + SL++R +I+E+I AISAT+EGQTTAHYIMD+L +DV +T+LA+G+P+G
Sbjct: 123 PDDLNLASLVDRCGAPEIQEVILAISATVEGQTTAHYIMDQLGHLDVHVTKLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ +A+++RT
Sbjct: 183 ELDYLDEGTLAQALKARTRF 202
>gi|52425561|ref|YP_088698.1| recombination protein RecR [Mannheimia succiniciproducens MBEL55E]
gi|73621497|sp|Q65SE7|RECR_MANSM RecName: Full=Recombination protein recR
gi|52307613|gb|AAU38113.1| RecR protein [Mannheimia succiniciproducens MBEL55E]
Length = 200
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C C
Sbjct: 3 TSPLLENLIESLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLARALTEAMSKIGHCEHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C+IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDICSICDNPRRQNSRLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R++ ++ E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQRRLQQEQFNEVILATNPTVEGDATANYIAELCNQQNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRTI 199
>gi|312866082|ref|ZP_07726303.1| recombination protein RecR [Streptococcus downei F0415]
gi|311098486|gb|EFQ56709.1| recombination protein RecR [Streptococcus downei F0415]
Length = 198
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D+ RD S ++VVE+ D+ A+E+ + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICRDKTRDQSTLLVVEESKDVTAMEKIQDYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ +I E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLINRLMDSQINEVIVATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|288926771|ref|ZP_06420681.1| recombination protein RecR [Prevotella buccae D17]
gi|288336452|gb|EFC74828.1| recombination protein RecR [Prevotella buccae D17]
Length = 203
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K+ +E + A++PG G ++A R LH +++ ++ + A A+ + ++V C
Sbjct: 1 MEKQYPSALLEKAVGEFAKLPGIGRKTALRLVLHTLRRNDEEVERFAAAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D++RD + + VVE+V D+ A+E ++ + +YHVLGG +SP+D I
Sbjct: 61 RVCHNISDTDICPICADERRDRTTVCVVENVQDVMAIENTQQFHGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL R+E + E+I A+S+T+EG TT YI +L+ VKIT +A GI +G
Sbjct: 121 GPGDIEIDSLCRRVEEGGVEEVILALSSTMEGDTTNFYISRRLQAAGVKITAIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+EL+Y D+ T+ +I +R
Sbjct: 181 NELEYTDEVTLGRSIVNRVPF 201
>gi|315037612|ref|YP_004031180.1| recombination protein RecR [Lactobacillus amylovorus GRL 1112]
gi|312275745|gb|ADQ58385.1| recombination protein RecR [Lactobacillus amylovorus GRL 1112]
gi|327182906|gb|AEA31353.1| recombination protein RecR [Lactobacillus amylovorus GRL 1118]
Length = 199
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI ++PG G ++A R + + ++ + A A+ + + C ICGN
Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFARALIQVKKDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC + RD + I+VVE D+ + E + LYHVL G LSP+D IGPE+I
Sbjct: 63 ITEKDICDICSNPNRDQTTIMVVEQPKDVMSFEEMGEYSGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKHDEVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTTL 199
>gi|110636415|ref|YP_676623.1| recombination protein RecR [Mesorhizobium sp. BNC1]
gi|123057246|sp|Q11AW7|RECR_MESSB RecName: Full=Recombination protein recR
gi|110287399|gb|ABG65458.1| DNA replication and repair protein RecR [Chelativorans sp. BNC1]
Length = 201
Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats.
Identities = 121/201 (60%), Positives = 162/201 (80%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQL PL AMA KV +C
Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLFSPLTTAMAEALAKVRVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT+DPC IC D +R+++ +IVVEDV+DLWALER+ A+NA YHVLGG+LSPLD +
Sbjct: 61 SVCGNVDTSDPCTICTDPRRESATLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ RI + E+I A++AT+EGQ TAHYI D+L G++V++T+LA+G+P+G
Sbjct: 121 GPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A++SRT
Sbjct: 181 GELDYLDEGTLAAALKSRTAF 201
>gi|212711279|ref|ZP_03319407.1| hypothetical protein PROVALCAL_02351 [Providencia alcalifaciens DSM
30120]
gi|212686008|gb|EEB45536.1| hypothetical protein PROVALCAL_02351 [Providencia alcalifaciens DSM
30120]
Length = 199
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP D
Sbjct: 63 FTEQEICNICDNPRRQQNGLICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLASETITEVILATNPTVEGEATASYIGQMCAQYGVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R+ L
Sbjct: 183 MVDSTTLSHSLSGRSKL 199
>gi|319406560|emb|CBI80202.1| recombination protein RecR [Bartonella sp. 1-1C]
Length = 201
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE+LI++LARIPG GPRSARRA L+L+KKKE LL PL A+ NKV +C
Sbjct: 1 MSKHIAGPEIEHLIQLLARIPGLGPRSARRAALYLIKKKETLLEPLGSALQETANKVRIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGNVDTTDPC+IC D RD S+IIVVED++DLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SICGNVDTTDPCSICTDPHRDESIIIVVEDISDLWALERAKFLLARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI ++L +KITRLA+G+P+G
Sbjct: 121 GPDELNIASLINRVTNNSITEIILAVNATVEGQTTAHYITNQLSQSSIKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT
Sbjct: 181 GELDYLDDGTLAAALQARTNF 201
>gi|160878209|ref|YP_001557177.1| recombination protein RecR [Clostridium phytofermentans ISDg]
gi|189029358|sp|A9KQC9|RECR_CLOPH RecName: Full=Recombination protein recR
gi|160426875|gb|ABX40438.1| recombination protein RecR [Clostridium phytofermentans ISDg]
Length = 198
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L R+PG G +SA+R H++ ++ + LA+ M + + V C +C
Sbjct: 2 DYYSTQISKLIEELGRLPGIGAKSAQRLAFHIINMPKEQVEHLAKTMLDARSNVKYCKVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC ++RD VI+VVE+ DL A E++ + +YHVL G++SP+ IGP+
Sbjct: 62 QTLTDKEICPICSSEKRDQKVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ + E+I A ++++EG+ TA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMLRL-QGDVDEVIIATNSSLEGEATAMYISKLIKPAGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 181 EYIDEVTLLRALDGRIQL 198
>gi|317488825|ref|ZP_07947357.1| recombination protein RecR [Eggerthella sp. 1_3_56FAA]
gi|316912079|gb|EFV33656.1| recombination protein RecR [Eggerthella sp. 1_3_56FAA]
Length = 198
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I+ L+ L R+PG GP+SA+R ++ + L+EA+A + V CS C
Sbjct: 2 YAVPSIQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSEAIAEVKETVRFCSRCF 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP++
Sbjct: 62 NYAEDDLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L+
Sbjct: 122 LRIAQLMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ AI +R L
Sbjct: 182 FADEVTLGRAIEARRPL 198
>gi|299142928|ref|ZP_07036055.1| recombination protein RecR [Prevotella oris C735]
gi|298575657|gb|EFI47536.1| recombination protein RecR [Prevotella oris C735]
Length = 203
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 128/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +E + A++PG G +SA R L++++++ + + +A+ + + V C
Sbjct: 1 MSDKYPSALLEKAVSEFAKLPGIGRKSALRLVLYMLRRENEEVDAFGKAITTLKHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RD + I VVE++ D+ A+E+++ N LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTDVCPICSDIRRDDTTICVVENIQDVMAVEKTQQYNGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I+SL+ER++ K++E+I A+S+T+EG TT YI KL V ++ +A GI +G
Sbjct: 121 GPNDIEIESLVERVKGGKVKEVILALSSTMEGDTTNFYISRKLAAYGVDVSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIINRTPF 201
>gi|270291182|ref|ZP_06197405.1| recombination protein RecR [Pediococcus acidilactici 7_4]
gi|304385467|ref|ZP_07367812.1| recombination protein R [Pediococcus acidilactici DSM 20284]
gi|270280578|gb|EFA26413.1| recombination protein RecR [Pediococcus acidilactici 7_4]
gi|304328674|gb|EFL95895.1| recombination protein R [Pediococcus acidilactici DSM 20284]
Length = 199
Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + ++ + A+A+ + + CSICGN
Sbjct: 3 YPEPIAKLIDSFMKLPGIGYKTATRLAFFTLDMQKDDVTDFAKALISAQRDLRFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD ++VVED D+ ++E+ K + LYHVL G LSP+D GPEDI
Sbjct: 63 ITEDDPCDICQDASRDQKTVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL+ R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIASLLTRLQKNEAIKEVIIATNATPEGEATAMYISRLIKPSGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+++A+ RT +
Sbjct: 183 YADQMTLYKAVEGRTEM 199
>gi|298492185|ref|YP_003722362.1| recombination protein RecR ['Nostoc azollae' 0708]
gi|298234103|gb|ADI65239.1| recombination protein RecR ['Nostoc azollae' 0708]
Length = 189
Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats.
Identities = 77/188 (40%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ L R+PG GP+SA+R LH++K+ E + LA+A+ + +V LC +C ++ + C
Sbjct: 2 IEQLQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIDAKKQVGLCQVCYHLSSEPVCD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC + RD + I VV D D+ ALE+++ YHVLGG +SP+D IGPE + Q+L+ R
Sbjct: 62 ICRNPNRDNTTICVVADSRDVIALEKTREYKGKYHVLGGVISPMDGIGPEQLTAQALVRR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ ++ +E+I AIS ++EG+TT YI + LK K+TR+A+G+P+G +L+Y D+ T+
Sbjct: 122 VSQQQPQEVIMAISPSVEGETTTLYIGELLKPF-TKVTRIAFGLPVGGDLEYADEVTLVR 180
Query: 194 AIRSRTVL 201
A+ R L
Sbjct: 181 ALEGRREL 188
>gi|152978672|ref|YP_001344301.1| recombination protein RecR [Actinobacillus succinogenes 130Z]
gi|171704263|sp|A6VN19|RECR_ACTSZ RecName: Full=Recombination protein recR
gi|150840395|gb|ABR74366.1| recombination protein RecR [Actinobacillus succinogenes 130Z]
Length = 200
Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +ENL++ L +PG GP+SA+R HL+++ LA A+ + +K+ CS C
Sbjct: 3 SSPLLENLVEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLARALTDAMSKIGHCSQCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEQETCAICDNPRRQHSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + TIEG TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQQRLQNEHFHEVILATNPTIEGDATANYIAEMCMQRNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R L
Sbjct: 183 TVDGTTLTHSFLGRREL 199
>gi|317055946|ref|YP_004104413.1| recombination protein RecR [Ruminococcus albus 7]
gi|315448215|gb|ADU21779.1| recombination protein RecR [Ruminococcus albus 7]
Length = 200
Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 115/189 (60%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A++PG G +SA+R H+++ ++ A A+ N++ V LC C N C
Sbjct: 12 LTEQFAKLPGIGMKSAQRLAYHVMRMSDKDAEAFANAVLNVHKNVHLCKECQNYTDRQLC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD VI VVE D+ A+ER+ +YHVL G +SP++ + P+D+ I+ L+
Sbjct: 72 PICDDDRRDHGVICVVESPQDITAIERTGEYKGVYHVLHGLISPINGVSPDDLKIKELLA 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI E+I A + T+EG TA YI LK + VK+TRLA+G+P+G +L+Y D+ T++
Sbjct: 132 RINSGTADEVIMATNPTVEGDATAFYISKLLKPLGVKVTRLAFGLPIGGQLEYADEITLY 191
Query: 193 EAIRSRTVL 201
+A+ +R +
Sbjct: 192 KALENRNEI 200
>gi|226954028|ref|ZP_03824492.1| recombination protein, gap repair [Acinetobacter sp. ATCC 27244]
gi|294650366|ref|ZP_06727733.1| recombination protein R [Acinetobacter haemolyticus ATCC 19194]
gi|226835218|gb|EEH67601.1| recombination protein, gap repair [Acinetobacter sp. ATCC 27244]
gi|292823779|gb|EFF82615.1| recombination protein R [Acinetobacter haemolyticus ATCC 19194]
Length = 198
Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 124/194 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + E L++ L +P GP+SA+R LHL+ K + L+ A+ + + C IC
Sbjct: 1 MFSERFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALSHALHEASSHIHECHICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTENEICDICASTERDEQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI LI+R+ K++E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+
Sbjct: 121 IGIPYLIQRLSEGKVQEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|227115286|ref|ZP_03828942.1| recombination protein RecR [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 201
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + I VVE AD++A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIYAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQPF 199
>gi|255691811|ref|ZP_05415486.1| recombination protein RecR [Bacteroides finegoldii DSM 17565]
gi|260622529|gb|EEX45400.1| recombination protein RecR [Bacteroides finegoldii DSM 17565]
Length = 205
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIMTLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTEICQICANPQRDASTICVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVRRVSEGGIKEVILALSTTMEGDTTNFYIYRKLDRLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|315633852|ref|ZP_07889141.1| recombination protein R [Aggregatibacter segnis ATCC 33393]
gi|315477102|gb|EFU67845.1| recombination protein R [Aggregatibacter segnis ATCC 33393]
Length = 200
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENLI+ L +PG GP+SA+R HL+++ LA+ + +K+ C C
Sbjct: 3 TSPLLENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDVCHICKNPRRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + +E+I A + T+EG TA+YI + +VK++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 MVDGTTLTHSFLGRREI 199
>gi|312200645|ref|YP_004020706.1| recombination protein RecR [Frankia sp. EuI1c]
gi|311231981|gb|ADP84836.1| recombination protein RecR [Frankia sp. EuI1c]
Length = 199
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 117/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L +PG GP+SA+R H++ + LA+A+ + KV C IC
Sbjct: 1 MYEGVVQDLIDELGALPGIGPKSAQRIAFHILAADPADVRRLAKALLEVKEKVQFCRICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 61 NVAQAELCRICADPRRDTTVICVVEESKDVVAVERTREFRGRYHVLGGAINPIGGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ LI R+ + ELI A EG+ TA Y+ ++ + + ++RLA G+PMG +L+
Sbjct: 121 LHIRELIARLADGTVTELILATDPNTEGEVTASYLARQIGPMGLTVSRLASGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D+ T+ A R V
Sbjct: 181 WADEVTLGRAFEGRRV 196
>gi|317502630|ref|ZP_07960750.1| recombination protein R [Prevotella salivae DSM 15606]
gi|315666249|gb|EFV05796.1| recombination protein R [Prevotella salivae DSM 15606]
Length = 203
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 131/201 (65%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +E + +++PG G +SA R L++++++ + + +EA+ + ++V C
Sbjct: 1 MSDKYPSSLLEKAVSEFSKLPGIGRKSALRLVLYMLRRENEEVDAFSEAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC D +RDA+ I VVE++ D+ A+E+++ N LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTEVCPICSDVRRDATTICVVENIQDVMAIEKTQQYNGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL+ER++ KI+E+I A+S+T+EG TT +I KL DV I+ +A GI +G
Sbjct: 121 GPNDIEISSLVERVKTGKIKEVILALSSTMEGDTTNFFISRKLADFDVAISVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIINRTPF 201
>gi|237739922|ref|ZP_04570403.1| recombination protein recR [Fusobacterium sp. 2_1_31]
gi|294782990|ref|ZP_06748314.1| recombination protein RecR [Fusobacterium sp. 1_1_41FAA]
gi|229423530|gb|EEO38577.1| recombination protein recR [Fusobacterium sp. 2_1_31]
gi|294479868|gb|EFG27645.1| recombination protein RecR [Fusobacterium sp. 1_1_41FAA]
Length = 197
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + + V CSICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDICNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SLIER+ + I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLIERLGKEDIEEIILATNPNIEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|88856403|ref|ZP_01131061.1| recombination protein RecR [marine actinobacterium PHSC20C1]
gi|88814270|gb|EAR24134.1| recombination protein RecR [marine actinobacterium PHSC20C1]
Length = 199
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 122/191 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
++ LI L R+PG GP+SA+R H+++ + + LAE + +I +KV C+ICGNV
Sbjct: 6 VQELIDELGRLPGIGPKSAQRIAFHILQTESFDVRRLAELLNDIRDKVHFCAICGNVTEH 65
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C+IC D +R + I VVE+ D+ A+ER++ + LYHVLGG++SP+D IGP+ + I+
Sbjct: 66 ETCSICRDPRRSPASICVVEEAKDVVAIERTREFSGLYHVLGGAISPIDGIGPDQLRIKQ 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A +EG+ TA Y+ L +++I+RLA G+P+G +L+Y D+
Sbjct: 126 LLGRLADGVVTEVIIATDPNLEGEATATYLTRLLVQPNLRISRLASGLPVGGDLEYADEV 185
Query: 190 TIFEAIRSRTV 200
T+ A R
Sbjct: 186 TLGRAFEGRRT 196
>gi|159035924|ref|YP_001535177.1| recombination protein RecR [Salinispora arenicola CNS-205]
gi|157914759|gb|ABV96186.1| recombination protein RecR [Salinispora arenicola CNS-205]
Length = 197
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI L R+PG GP+SA+R H++ + LA+ + + V C+ C
Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLADVLRKVKELVRFCTSCY 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ +GP++
Sbjct: 61 NVAESEQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGVGPDN 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ +RELI A EG+ TA Y+ +K + + ++RLA G+P+G +L+
Sbjct: 121 LRVRELLTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGIAVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEITLGRAFEGRRS 196
>gi|307942777|ref|ZP_07658122.1| recombination protein RecR [Roseibium sp. TrichSKD4]
gi|307773573|gb|EFO32789.1| recombination protein RecR [Roseibium sp. TrichSKD4]
Length = 202
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 125/200 (62%), Positives = 164/200 (82%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QK++ G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PLAEAM +K+ +CS
Sbjct: 3 QKRVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLAEAMGIAVDKIGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG VDT+DPCAIC D +RD +++VVEDVADLWALER+ A+NA YHVLGG+LSPLD IG
Sbjct: 63 KCGTVDTSDPCAICSDPRRDPKLLVVVEDVADLWALERAGAINACYHVLGGTLSPLDGIG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PED+ + SL+ R E ++ E+I AI+AT+EGQTTAHY+MD+L + V +TRLA+G+P+G
Sbjct: 123 PEDLNLASLVTRCEDPELEEVILAINATVEGQTTAHYVMDQLAHLSVNVTRLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ +A+R+RT
Sbjct: 183 ELDYLDEGTLAQALRARTQF 202
>gi|218130919|ref|ZP_03459723.1| hypothetical protein BACEGG_02520 [Bacteroides eggerthii DSM 20697]
gi|217987263|gb|EEC53594.1| hypothetical protein BACEGG_02520 [Bacteroides eggerthii DSM 20697]
Length = 205
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 128/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSILLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLEIESLVQRVAGGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRTPF 201
>gi|95928307|ref|ZP_01311055.1| recombination protein RecR [Desulfuromonas acetoxidans DSM 684]
gi|95135578|gb|EAT17229.1| recombination protein RecR [Desulfuromonas acetoxidans DSM 684]
Length = 199
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 117/194 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ LI L + PG G ++A R H++++ E+ L EA+ N+ +V CS C +V
Sbjct: 6 PSLNRLIVELGKFPGIGRKTATRLAFHVMQQSEEQSQALVEAIQNLKQRVRFCSTCFHVT 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC +C RD S++ VVE DL A+ER + YHVL G LSPLD +GP+D+ I
Sbjct: 66 EQDPCVLCTSTSRDDSLLCVVEQPQDLMAIERGHSYRGRYHVLHGVLSPLDGVGPDDLKI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ER+ E+I A + +IEG+ TA Y+ L+ V+ITRLA+GIPMGS+L+Y+D
Sbjct: 126 AELVERVRQGNFNEVIVATNFSIEGEATALYLSRLLQPFGVRITRLAHGIPMGSDLEYVD 185
Query: 188 DGTIFEAIRSRTVL 201
D T+ AI R L
Sbjct: 186 DATVGRAIEGRRDL 199
>gi|315605706|ref|ZP_07880739.1| recombination protein R [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312661|gb|EFU60745.1| recombination protein R [Actinomyces sp. oral taxon 180 str. F0310]
Length = 197
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +LI ++PG GP+SA+R +H++ + + L EA+ + +V C +C
Sbjct: 1 MYDGALADLIDQFGQLPGIGPKSAQRMAMHVLDADPEEVARLVEAINAVRGRVRHCDVCA 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C+IC D +RD S I VV++ D+ A+E ++ YHVLGG + P+ IGP+
Sbjct: 61 NLTEDDQCSICRDVRRDPSQICVVQEPKDIQAIEGARVFRGRYHVLGGVIDPIHGIGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ R+ + E+I A + +EG+ TA Y+ L + V+ +RLA G+PMG +L+
Sbjct: 121 LNIASLMSRLADGTVTEVILATNPNVEGEATAAYLARMLSTMGVETSRLAMGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R L
Sbjct: 181 YADSVTLGRALEGRRRL 197
>gi|329955111|ref|ZP_08296092.1| recombination protein RecR [Bacteroides clarus YIT 12056]
gi|328526401|gb|EGF53416.1| recombination protein RecR [Bacteroides clarus YIT 12056]
Length = 205
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSILLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E++ A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLEIESLVQRVSAGGIKEVVLALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRTPF 201
>gi|319902361|ref|YP_004162089.1| DNA replication and repair protein RecR [Bacteroides helcogenes P
36-108]
gi|319417392|gb|ADV44503.1| DNA replication and repair protein RecR [Bacteroides helcogenes P
36-108]
Length = 205
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ + A+ + ++V C
Sbjct: 1 MNGQYPSTLLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTMAVEAFGNAIITLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD+SV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTEICRICSNPQRDSSVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVQRVSSGDIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRTPF 201
>gi|257438603|ref|ZP_05614358.1| recombination protein RecR [Faecalibacterium prausnitzii A2-165]
gi|257198947|gb|EEU97231.1| recombination protein RecR [Faecalibacterium prausnitzii A2-165]
Length = 199
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+E LI+ ++ PG G + A R ++ +Q LA A+ N + K+ C +C
Sbjct: 3 YNAAPLEKLIEEFSKFPGIGRKGATRMAYQVLSMSDQDAAALAGAIQNAHTKLHRCRVCQ 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + C IC +RD SVI VVE D+ A ER++ + +YHVL G +SP+D IG E
Sbjct: 63 NYTEAELCPICASAKRDRSVICVVETPRDVQAFERTREYHGMYHVLHGLISPMDGIGAEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ +++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G+ L+
Sbjct: 123 LTVKELLARLGDGEVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGASLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T++ A+ R L
Sbjct: 183 YTDETTLYRALSGRGEL 199
>gi|328541813|ref|YP_004301922.1| Recombination protein RecR [polymorphum gilvum SL003B-26A1]
gi|326411565|gb|ADZ68628.1| Recombination protein RecR [Polymorphum gilvum SL003B-26A1]
Length = 202
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 123/200 (61%), Positives = 161/200 (80%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
+++ G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLAEAM +V +CS
Sbjct: 3 NRRVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKEQLLVPLAEAMGVAVERVGICS 62
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CG VDT+DPC IC D RD SV++VVEDV+DLWALER+ +NA YHVLGG+LSPLD IG
Sbjct: 63 TCGTVDTSDPCTICADPGRDDSVLVVVEDVSDLWALERAAVLNARYHVLGGTLSPLDGIG 122
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PED+ I +L+ER+ IRE+I A++AT+EGQTTAHY+ +L G+DV +TRLA+G+P+G
Sbjct: 123 PEDLSIAALVERVRAGTIREVILAVNATVEGQTTAHYVTGQLAGLDVTVTRLAHGVPVGG 182
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ +A+++RT
Sbjct: 183 ELDYLDEGTLAQALKARTRF 202
>gi|229552946|ref|ZP_04441671.1| recombination protein RecR [Lactobacillus rhamnosus LMS2-1]
gi|229313690|gb|EEN79663.1| recombination protein RecR [Lactobacillus rhamnosus LMS2-1]
Length = 199
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG G ++A R + + + + A+++ + CSICGN
Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+
Sbjct: 63 ITDEDPCAICRDKNRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLQGVLSPIEGRGPEDL 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL++R++ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIESLLKRLKKNTAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ RT L
Sbjct: 183 YADEMTLMKAVEGRTEL 199
>gi|325956091|ref|YP_004286701.1| recombination protein RecR [Lactobacillus acidophilus 30SC]
gi|325332656|gb|ADZ06564.1| recombination protein RecR [Lactobacillus acidophilus 30SC]
Length = 199
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI ++PG G ++A R + + ++ + A A+ + + C ICGN
Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFARALIQVKKDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC + RD + I+VVE D+ + E + LYHVL G LSP+D IGPE+I
Sbjct: 63 ITEKDICDICSNPNRDQTTIMVVEQPKDVMSFEEMGEYSGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKHDEVKEVILALNSTSEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTTL 199
>gi|300727718|ref|ZP_07061104.1| recombination protein RecR [Prevotella bryantii B14]
gi|299775006|gb|EFI71612.1| recombination protein RecR [Prevotella bryantii B14]
Length = 203
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 128/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K+ + +E + +R+PG G +++ R LH++++ + + A++++ +V C
Sbjct: 1 MEKQYPSRLLEKAVSEFSRLPGIGRKTSLRLVLHMLRQTNEDVDGFVSAISHLKKEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RDAS + VVE++ D+ A+E ++ + LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTDVCPICSDPRRDASTVCVVENIQDVMAIENTQQYHGLYHVLGGIISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SLI R+ + E+IFA+S+T+EG TT +I KL VK++ +A GI +G
Sbjct: 121 GPADIEIDSLINRVAEGHVEEIIFALSSTMEGDTTNFFISRKLADFPVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSILNRTPF 201
>gi|225571142|ref|ZP_03780140.1| hypothetical protein CLOHYLEM_07230 [Clostridium hylemonae DSM
15053]
gi|225159973|gb|EEG72592.1| hypothetical protein CLOHYLEM_07230 [Clostridium hylemonae DSM
15053]
Length = 198
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+ +PG G +SA R HL+ + + LA+ M V CS C
Sbjct: 2 DYYSNQISKLIEELSCLPGIGTKSASRLAFHLIHMPVEEVKRLADTMVEARENVRYCSEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC ++ RD I+VVE DL A E++ +YHVL G++SP+ IGPE
Sbjct: 62 YTLTDQELCPICRNEARDHKTIMVVETTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ ++ L+ER+ K + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DVKLKELMERL-RKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT +
Sbjct: 181 EYIDEVTLLRALEGRTEI 198
>gi|15672322|ref|NP_266496.1| RecM [Lactococcus lactis subsp. lactis Il1403]
gi|281490887|ref|YP_003352867.1| recombination protein Recr [Lactococcus lactis subsp. lactis KF147]
gi|20139706|sp|Q9CIL6|RECR_LACLA RecName: Full=Recombination protein recR
gi|12723208|gb|AAK04438.1|AE006271_1 RecM protein [Lactococcus lactis subsp. lactis Il1403]
gi|281374645|gb|ADA64165.1| Recombination protein recR [Lactococcus lactis subsp. lactis KF147]
gi|326405919|gb|ADZ62990.1| recombination protein RecR [Lactococcus lactis subsp. lactis CV56]
Length = 198
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICG
Sbjct: 2 YYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ +DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++
Sbjct: 62 NLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++LI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 122 INVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ +R +
Sbjct: 182 YADEITLSKAVENRLEI 198
>gi|227877634|ref|ZP_03995687.1| recombination protein RecR [Lactobacillus crispatus JV-V01]
gi|256844524|ref|ZP_05550010.1| recombination protein RecR [Lactobacillus crispatus 125-2-CHN]
gi|256849087|ref|ZP_05554520.1| recombinational DNA repair protein [Lactobacillus crispatus
MV-1A-US]
gi|262047569|ref|ZP_06020524.1| recombination protein RecR [Lactobacillus crispatus MV-3A-US]
gi|293379954|ref|ZP_06626055.1| recombination protein RecR [Lactobacillus crispatus 214-1]
gi|312977920|ref|ZP_07789666.1| recombination protein RecR [Lactobacillus crispatus CTV-05]
gi|227862782|gb|EEJ70248.1| recombination protein RecR [Lactobacillus crispatus JV-V01]
gi|256613602|gb|EEU18805.1| recombination protein RecR [Lactobacillus crispatus 125-2-CHN]
gi|256713863|gb|EEU28851.1| recombinational DNA repair protein [Lactobacillus crispatus
MV-1A-US]
gi|260572145|gb|EEX28710.1| recombination protein RecR [Lactobacillus crispatus MV-3A-US]
gi|290923467|gb|EFE00369.1| recombination protein RecR [Lactobacillus crispatus 214-1]
gi|310895227|gb|EFQ44295.1| recombination protein RecR [Lactobacillus crispatus CTV-05]
Length = 199
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI ++PG G ++A R + + +Q + A+++ + + C ICGN
Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPDQDVDDFAKSLVQVKKDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I
Sbjct: 63 ITEKDVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKNDAVKEVILALNSTPEGESTAMYISKLIKSAGIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTAL 199
>gi|86606039|ref|YP_474802.1| recombination protein RecR [Synechococcus sp. JA-3-3Ab]
gi|123506557|sp|Q2JUS3|RECR_SYNJA RecName: Full=Recombination protein recR
gi|86554581|gb|ABC99539.1| recombination protein RecR [Synechococcus sp. JA-3-3Ab]
Length = 199
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 84/199 (42%), Positives = 124/199 (62%), Gaps = 2/199 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG G ++A+R LHL+ + + LA+A+ V CSIC
Sbjct: 1 MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DPC IC QRD S VV DV DL A+ER++ LYHVLGG +SP++ IG E
Sbjct: 61 NWSAEDPCEICRSPQRDPSTWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSE 182
+ I+ L+ R+ +K +ELIFA+S ++EG+ T H + D LK +++TRLA+G+PMGSE
Sbjct: 121 LRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLKPVAPGLRMTRLAFGLPMGSE 180
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ +R
Sbjct: 181 LEYADEVTLARALEARQEF 199
>gi|296101607|ref|YP_003611753.1| recombination protein RecR [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056066|gb|ADF60804.1| recombination protein RecR [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 201
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|317047212|ref|YP_004114860.1| recombination protein RecR [Pantoea sp. At-9b]
gi|316948829|gb|ADU68304.1| recombination protein RecR [Pantoea sp. At-9b]
Length = 201
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEQETLQEVILATNPTVEGEATANYIAELCSQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|317476230|ref|ZP_07935481.1| recombination protein RecR [Bacteroides eggerthii 1_2_48FAA]
gi|316907641|gb|EFV29344.1| recombination protein RecR [Bacteroides eggerthii 1_2_48FAA]
Length = 205
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 128/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSILLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCYNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLEIESLVQRVAAGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRTPF 201
>gi|313114016|ref|ZP_07799570.1| recombination protein RecR [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623636|gb|EFQ07037.1| recombination protein RecR [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 199
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
T +E LI+ ++ PG G + A R ++ ++ LA A+ + K+ C IC
Sbjct: 3 YTAAPLEKLIEEFSKFPGIGRKGATRMAYQVLSMSDEDAAALAGAIQGAHTKLHRCRICQ 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D C IC +RD SVI VVE D+ A ER++ + LYHVL G LSP+D I E
Sbjct: 63 NYTEADICPICASAKRDPSVICVVETPRDVQAFERTREYHGLYHVLHGLLSPMDGITAEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ K++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G+ L+
Sbjct: 123 LCVKELLARLGDGKVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGASLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T++ A+ R L
Sbjct: 183 YTDETTLYRALSGRGEL 199
>gi|224024429|ref|ZP_03642795.1| hypothetical protein BACCOPRO_01154 [Bacteroides coprophilus DSM
18228]
gi|224017651|gb|EEF75663.1| hypothetical protein BACCOPRO_01154 [Bacteroides coprophilus DSM
18228]
Length = 226
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ + + + AM + ++V C
Sbjct: 22 MNQQYPSALLEKAVGEFAKLPGIGRKTAMRLVLHLLRQSTESVEAFSSAMVTLKHEVKYC 81
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 82 KVCHNISDTDICRICSNPSRDASTVCVVENIRDVMAVENTQQYKGLYHVLGGVISPMDGI 141
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++E+I A+S+T+EG TT +I KL G DVK+T +A GI +G
Sbjct: 142 GPSDLQIDSLVARVRSGAVKEVILALSSTMEGDTTNFFIYRKLSGFDVKLTVIARGISIG 201
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +R
Sbjct: 202 DELEYTDEVTLGRSIVNRVAF 222
>gi|316932086|ref|YP_004107068.1| recombination protein RecR [Rhodopseudomonas palustris DX-1]
gi|315599800|gb|ADU42335.1| recombination protein RecR [Rhodopseudomonas palustris DX-1]
Length = 201
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 109/201 (54%), Positives = 154/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PL+ A+ +K+ +C
Sbjct: 1 MASSVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMAPLSAALQVAIDKIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CGN+DT +PC +C D +RD+S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 TTCGNIDTQNPCTVCTDPRRDSSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L++R + E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIDALVKRAHDPGVAEIILALNATVDGQTTAHYVTDLLQDAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|309813068|ref|ZP_07706794.1| recombination protein RecR [Dermacoccus sp. Ellin185]
gi|308432952|gb|EFP56858.1| recombination protein RecR [Dermacoccus sp. Ellin185]
Length = 202
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI L R+PG GP+SA+R HL++ + LAE + + V C +C NV T
Sbjct: 9 VQDLIDELGRLPGVGPKSAQRIAFHLLEADADDVQRLAEVLLKVKETVHFCEVCFNVAET 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C +C D QR+ ++I +VE+ D+ A+ER++ YHVLGG+L+P++ +GP D+ I
Sbjct: 69 NLCRVCADPQRNPALICIVEESKDVVAIERTREFRGRYHVLGGALNPIEGVGPGDLHITE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ + E+I A + G+ TA Y+ + + V ++RLA G+P+G +L+Y D+
Sbjct: 129 LMARLSDTSLEEIIIATNPNHTGEATASYLARLIGPMGVTVSRLASGLPVGGDLEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ A R VL
Sbjct: 189 TLGRAFEGRRVL 200
>gi|163789944|ref|ZP_02184380.1| recombination protein RecR [Carnobacterium sp. AT7]
gi|159874884|gb|EDP68952.1| recombination protein RecR [Carnobacterium sp. AT7]
Length = 198
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG G ++A R + +E+ + A+A+ + + CSICG
Sbjct: 3 YPEPISKLMDSYMKLPGIGAKTAARLAFFTIDMREEDVTDFAKALISAKRDLHYCSICGQ 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S+++VVED D+ ALE+ + + +YHVL G LSP++ GPEDI
Sbjct: 63 ITEDDPCQICQDKSRDRSIVLVVEDPKDVMALEKMREYHGVYHVLHGVLSPIEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R++ +I E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIPSLIKRLQSDEINEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEITLLKAVEGRREL 198
>gi|119505874|ref|ZP_01627939.1| recombination protein RecR [marine gamma proteobacterium HTCC2080]
gi|119458302|gb|EAW39412.1| recombination protein RecR [marine gamma proteobacterium HTCC2080]
Length = 204
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 122/195 (62%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I +LI+ L +PG GP+SA+R TLHL+++ Q L+ A++ +V C C N
Sbjct: 4 SPSINDLIEALRCLPGVGPKSAQRMTLHLLERDRQGAETLSGALSQALERVGRCKSCRNF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C +C D +RD +++ VVE D+ ALE++ + LY VL G LSP+D IGPEDIG
Sbjct: 64 TELELCELCSDPRRDHTLLCVVEAPGDVMALEQTASFRGLYFVLMGHLSPIDGIGPEDIG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER + IRE+I A + T+EG+ TA YI + + D+ ++R+A+G+P+G EL+YL
Sbjct: 124 LDRLEERFRSEAIREVILATNPTVEGEATAFYIAQRAQQEDIAVSRIAHGVPLGGELEYL 183
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A+ RT L
Sbjct: 184 DASTLAHALSGRTPL 198
>gi|255319564|ref|ZP_05360777.1| recombination protein RecR [Acinetobacter radioresistens SK82]
gi|262379862|ref|ZP_06073018.1| recombination protein RecR [Acinetobacter radioresistens SH164]
gi|255303362|gb|EET82566.1| recombination protein RecR [Acinetobacter radioresistens SK82]
gi|262299319|gb|EEY87232.1| recombination protein RecR [Acinetobacter radioresistens SH164]
Length = 198
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 77/194 (39%), Positives = 119/194 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + L++ L +P GP+SA+R LHL+ K + LA A+ + + C +C
Sbjct: 1 MFSERFDQLVQALRILPSVGPKSAQRMALHLLMKNREGASGLAHALNEATSYIHECKVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC +RD + VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTENEVCDICASSERDEQQLCVVESPADVMAIEQSGSFKGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L+ R+ I E+I A +AT+EGQ TAHY+ + K + + +TR+A G+P G EL+
Sbjct: 121 IGIPYLVRRLSEGHITEVILATNATVEGQATAHYLAEATKHLPLHLTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQALHNR 194
>gi|326790141|ref|YP_004307962.1| recombination protein recR [Clostridium lentocellum DSM 5427]
gi|326540905|gb|ADZ82764.1| Recombination protein recR [Clostridium lentocellum DSM 5427]
Length = 200
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
G ++ LI+ L+R+PG G +SA+R H++ + + LA + + C C
Sbjct: 4 YYGDKMVALIEELSRLPGIGSKSAQRLAFHIISMPVEKVEHLANTLVAAKKHINYCEKCC 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC D R I+VVED D+ A E++K LYH+L G++SP+ +GP D
Sbjct: 64 TITDDKLCPICKDSNRANGQIMVVEDPRDMAAYEKTKEFKGLYHILHGAISPMMGVGPSD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+ L+ERI+ + I E+I A + IEG+ TA YI LK + +KITR+A+G+P+G +L+
Sbjct: 124 IKIKELLERIQKEAIEEVIIATNPNIEGEATAMYISKLLKPLGIKITRIAHGVPVGGDLE 183
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D+ T+ A+ R +
Sbjct: 184 YVDEITLTRALEGRREM 200
>gi|154508070|ref|ZP_02043712.1| hypothetical protein ACTODO_00561 [Actinomyces odontolyticus ATCC
17982]
gi|293191861|ref|ZP_06609322.1| recombination protein RecR [Actinomyces odontolyticus F0309]
gi|153797704|gb|EDN80124.1| hypothetical protein ACTODO_00561 [Actinomyces odontolyticus ATCC
17982]
gi|292820444|gb|EFF79429.1| recombination protein RecR [Actinomyces odontolyticus F0309]
Length = 197
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +LI ++PG GP+SA+R +H++ + + + L +A+ + +V C ICG
Sbjct: 1 MYDGALADLIDQFGQLPGIGPKSAQRMAMHVLDAEPEDVARLVDAINAVRGRVRHCDICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C+IC D +RD SVI VV++ D+ A+E ++ YHVLGG + P+ +GP+
Sbjct: 61 NLTEEDECSICRDVRRDPSVICVVQEPKDIQAIEGARVFRGRYHVLGGVIDPIHGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ R+ + E+I A + +EG+ TA Y+ L + V+ +RLA G+PMG +L+
Sbjct: 121 LNIASLMSRLADGTVVEVILATNPNVEGEATAAYLARMLSTMGVETSRLAMGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R L
Sbjct: 181 YADSVTLGRALEGRRRL 197
>gi|3925822|dbj|BAA34648.1| RecR protein [Deinococcus radiodurans]
Length = 220
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 2/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N
Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ +
Sbjct: 63 ITDAEKCDVCADPSRDQRTICVVEEHGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y
Sbjct: 123 HIKPLLPRVGQG--MEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEY 180
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 181 TDEVTLGRALTGRQT 195
>gi|116493220|ref|YP_804955.1| recombination protein RecR [Pediococcus pentosaceus ATCC 25745]
gi|122265316|sp|Q03E59|RECR_PEDPA RecName: Full=Recombination protein recR
gi|116103370|gb|ABJ68513.1| DNA replication and repair protein RecR [Pediococcus pentosaceus
ATCC 25745]
Length = 199
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + ++ + A+A+ + + CSICGN
Sbjct: 3 YPEPIAKLIDSFMKLPGIGYKTATRLAFFTLDMEKDDVTEFAKALISAQRDLSFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD ++VVED D+ ++E+ K + LYHVL G LSP+D GPEDI
Sbjct: 63 ITEDDPCDICQDPSRDQKAVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +L+ R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIAALLTRLQKNEAIKEVIIATNATPEGEATAMYISRLVKPSGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+++A+ RT +
Sbjct: 183 YADQMTLYKAVEGRTEM 199
>gi|315608945|ref|ZP_07883917.1| recombination protein R [Prevotella buccae ATCC 33574]
gi|315249325|gb|EFU29342.1| recombination protein R [Prevotella buccae ATCC 33574]
Length = 203
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K+ +E + A++PG G ++A R LH +++ ++ + A A+ + ++V C
Sbjct: 1 MEKQYPSALLEKAVGEFAKLPGIGRKTALRLVLHTLRRNDEEVERFAAAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D++RD + + VVE+V D+ A+E ++ + +YHVLGG +SP+D I
Sbjct: 61 RLCHNISDTDICPICADERRDRTTVCVVENVQDVMAIENTQQFHGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL R+E + E+I A+S+T+EG TT YI +L+ VKIT +A GI +G
Sbjct: 121 GPGDIEIDSLCRRVEEGGVEEVILALSSTMEGDTTNFYISRRLQAAGVKITAIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+EL+Y D+ T+ +I +R
Sbjct: 181 NELEYTDEVTLGRSIVNRVPF 201
>gi|90962201|ref|YP_536117.1| recombination protein RecR [Lactobacillus salivarius UCC118]
gi|227891206|ref|ZP_04009011.1| recombination protein [Lactobacillus salivarius ATCC 11741]
gi|301300449|ref|ZP_07206649.1| recombination protein RecR [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122448749|sp|Q1WSU5|RECR_LACS1 RecName: Full=Recombination protein recR
gi|90821395|gb|ABE00034.1| Recombination protein [Lactobacillus salivarius UCC118]
gi|227867080|gb|EEJ74501.1| recombination protein [Lactobacillus salivarius ATCC 11741]
gi|300214870|gb|ADJ79286.1| Recombination protein recR [Lactobacillus salivarius CECT 5713]
gi|300851946|gb|EFK79630.1| recombination protein RecR [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 199
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + +E + A+++ + + CSICGN
Sbjct: 3 YPEPISKLIDSYMKLPGIGSKTATRLAFYTIDMQEDDVTEFAQSLISAKRDLSYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D+ RD S ++VVE D+ +LER + LYHVL G LSP++ GPEDI
Sbjct: 63 ITESDPCMICADKSRDNSKVVVVEQPKDVMSLERMNEYHGLYHVLHGVLSPIEGKGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL+ R++ + I+E+I A +AT EG+ TA YI +K ++K+TRLA+G+ +GS+++
Sbjct: 123 NIASLLRRLQKNEAIKEVIIATNATPEGEATAMYIARLVKPANIKVTRLAHGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+AI R +
Sbjct: 183 YADEMTLFKAIEGRQEI 199
>gi|281424030|ref|ZP_06254943.1| recombination protein RecR [Prevotella oris F0302]
gi|281401813|gb|EFB32644.1| recombination protein RecR [Prevotella oris F0302]
Length = 203
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 129/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +E + A++PG G +SA R L++++++ + + +A+ + ++V C
Sbjct: 1 MSDKYASALLEKAVSEFAKLPGIGRKSALRLVLYMLRREHEEVDAFGKAITTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC D +RD + I VVE++ D+ A+E+++ N LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTDVCPICSDIRRDDTTICVVENIQDVMAVEKTQQYNGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I+SL+ER++ K++E+I A+S+T+EG TT YI KL V ++ +A GI +G
Sbjct: 121 GPNDIEIESLVERVKGGKVKEVILALSSTMEGDTTNFYISRKLAAYGVDVSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIINRTPF 201
>gi|170767663|ref|ZP_02902116.1| recombination protein RecR [Escherichia albertii TW07627]
gi|218703755|ref|YP_002411274.1| recombination protein RecR [Escherichia coli UMN026]
gi|293403593|ref|ZP_06647684.1| recombination protein recR [Escherichia coli FVEC1412]
gi|298379203|ref|ZP_06989084.1| recombination protein recR [Escherichia coli FVEC1302]
gi|300900546|ref|ZP_07118713.1| recombination protein RecR [Escherichia coli MS 198-1]
gi|226739002|sp|B7N925|RECR_ECOLU RecName: Full=Recombination protein recR
gi|170123151|gb|EDS92082.1| recombination protein RecR [Escherichia albertii TW07627]
gi|218430852|emb|CAR11726.1| gap repair protein [Escherichia coli UMN026]
gi|291429446|gb|EFF02466.1| recombination protein recR [Escherichia coli FVEC1412]
gi|298280316|gb|EFI21820.1| recombination protein recR [Escherichia coli FVEC1302]
gi|300356027|gb|EFJ71897.1| recombination protein RecR [Escherichia coli MS 198-1]
Length = 201
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|42518520|ref|NP_964450.1| recombination protein RecR [Lactobacillus johnsonii NCC 533]
gi|73621493|sp|Q74KZ9|RECR_LACJO RecName: Full=Recombination protein recR
gi|41582805|gb|AAS08416.1| recombination protein RecR [Lactobacillus johnsonii NCC 533]
Length = 199
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDSNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|152969027|ref|YP_001334136.1| recombination protein RecR [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238893442|ref|YP_002918176.1| recombination protein RecR [Klebsiella pneumoniae NTUH-K2044]
gi|262041605|ref|ZP_06014800.1| recombination protein RecR [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330002984|ref|ZP_08304509.1| recombination protein RecR [Klebsiella sp. MS 92-3]
gi|166221945|sp|A6T5N5|RECR_KLEP7 RecName: Full=Recombination protein recR
gi|150953876|gb|ABR75906.1| recombination protein RecR [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238545758|dbj|BAH62109.1| recombination protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041031|gb|EEW42107.1| recombination protein RecR [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537095|gb|EGF63374.1| recombination protein RecR [Klebsiella sp. MS 92-3]
Length = 201
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQYSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|253687473|ref|YP_003016663.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259563702|sp|C6DB85|RECR_PECCP RecName: Full=Recombination protein recR
gi|251754051|gb|ACT12127.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 201
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQPF 199
>gi|306830912|ref|ZP_07464074.1| recombination protein R [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426935|gb|EFM30045.1| recombination protein R [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 200
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 4 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD SVI+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 64 NLTDEDPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYRGLYHVLHGLISPMNGVGPDD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 124 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 183
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 184 YADEVTLLRAIENRTEL 200
>gi|261822476|ref|YP_003260582.1| recombination protein RecR [Pectobacterium wasabiae WPP163]
gi|261606489|gb|ACX88975.1| recombination protein RecR [Pectobacterium wasabiae WPP163]
Length = 201
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLEERLQVESINEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQPF 199
>gi|325977795|ref|YP_004287511.1| recombination protein recR [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177723|emb|CBZ47767.1| Recombination protein recR [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 198
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|145628813|ref|ZP_01784613.1| recombination protein RecR [Haemophilus influenzae 22.1-21]
gi|144979283|gb|EDJ88969.1| recombination protein RecR [Haemophilus influenzae 22.1-21]
Length = 200
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDICNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRQI 199
>gi|29346491|ref|NP_809994.1| recombination protein RecR [Bacteroides thetaiotaomicron VPI-5482]
gi|253568105|ref|ZP_04845516.1| recombination protein recR [Bacteroides sp. 1_1_6]
gi|298387732|ref|ZP_06997283.1| recombination protein RecR [Bacteroides sp. 1_1_14]
gi|73621464|sp|Q8A8T6|RECR_BACTN RecName: Full=Recombination protein recR
gi|29338387|gb|AAO76188.1| recombination protein recR [Bacteroides thetaiotaomicron VPI-5482]
gi|251842178|gb|EES70258.1| recombination protein recR [Bacteroides sp. 1_1_6]
gi|298259588|gb|EFI02461.1| recombination protein RecR [Bacteroides sp. 1_1_14]
Length = 205
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSVLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVSEGGIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEITLGRSIVNRTLF 201
>gi|229825855|ref|ZP_04451924.1| hypothetical protein GCWU000182_01219 [Abiotrophia defectiva ATCC
49176]
gi|229789875|gb|EEP25989.1| hypothetical protein GCWU000182_01219 [Abiotrophia defectiva ATCC
49176]
Length = 199
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 125/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
GK++ L++ L+++PG G ++A R H++ ++ + L+ A++ VC C C
Sbjct: 2 DYYGKQVNKLVEELSKLPGIGVKTAGRLAFHIIGMPKENVEALSLAISQAKENVCYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC D++R+ ++I+VVE+V DL A E++K + +YHVL G +SPL IGP
Sbjct: 62 FTLTDSPLCPICADKERNHNMIMVVENVRDLAAYEKTKKYDGVYHVLHGVISPLLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R++ + E+I A +++EG+TTA YI +K +K+TR+A G+P+G +L
Sbjct: 122 DIKLKELMVRLQNNDVEEVIIATGSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A RTVL
Sbjct: 182 ENIDEVTLLRAFVGRTVL 199
>gi|295096737|emb|CBK85827.1| DNA replication and repair protein RecR [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 201
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|238018441|ref|ZP_04598867.1| hypothetical protein VEIDISOL_00268 [Veillonella dispar ATCC 17748]
gi|282849746|ref|ZP_06259130.1| recombination protein RecR [Veillonella parvula ATCC 17745]
gi|294792634|ref|ZP_06757781.1| recombination protein RecR [Veillonella sp. 6_1_27]
gi|237864912|gb|EEP66202.1| hypothetical protein VEIDISOL_00268 [Veillonella dispar ATCC 17748]
gi|282580683|gb|EFB86082.1| recombination protein RecR [Veillonella parvula ATCC 17745]
gi|294456533|gb|EFG24896.1| recombination protein RecR [Veillonella sp. 6_1_27]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 115/194 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 3 NALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI +
Sbjct: 63 AQDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRV 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D
Sbjct: 123 KELIARLRDGVVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ +R +
Sbjct: 183 ELTLGGAVVNRQEM 196
>gi|269798690|ref|YP_003312590.1| recombination protein RecR [Veillonella parvula DSM 2008]
gi|269095319|gb|ACZ25310.1| recombination protein RecR [Veillonella parvula DSM 2008]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 115/194 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 3 NALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI +
Sbjct: 63 AQDPCEFCSNPNRDHTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRV 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D
Sbjct: 123 KELIARLRDGVVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ +R +
Sbjct: 183 ELTLGGAVVNRQEM 196
>gi|50085407|ref|YP_046917.1| recombination protein RecR [Acinetobacter sp. ADP1]
gi|73621454|sp|Q6FA18|RECR_ACIAD RecName: Full=Recombination protein recR
gi|49531383|emb|CAG69095.1| recombination protein, gap repair [Acinetobacter sp. ADP1]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 81/194 (41%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ E L++ L +P GP+SA+R LHL+ K + LA A+ + + C IC
Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC+ RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTENEICDICLSNDRDQHLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI LI+R+ +I E+I A +AT+EGQ TAHY+++ K + V +TR+A G+P G EL+
Sbjct: 121 IGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATKHLPVHMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|15675339|ref|NP_269513.1| recombination protein RecR [Streptococcus pyogenes M1 GAS]
gi|19746381|ref|NP_607517.1| recombination protein RecR [Streptococcus pyogenes MGAS8232]
gi|21910621|ref|NP_664889.1| recombination protein RecR [Streptococcus pyogenes MGAS315]
gi|71903815|ref|YP_280618.1| recombination protein RecR [Streptococcus pyogenes MGAS6180]
gi|71910972|ref|YP_282522.1| recombination protein RecR [Streptococcus pyogenes MGAS5005]
gi|94988836|ref|YP_596937.1| recombination protein RecR [Streptococcus pyogenes MGAS9429]
gi|94990739|ref|YP_598839.1| recombination protein RecR [Streptococcus pyogenes MGAS10270]
gi|94992727|ref|YP_600826.1| recombination protein RecR [Streptococcus pyogenes MGAS2096]
gi|161761308|ref|YP_060504.2| recombination protein RecR [Streptococcus pyogenes MGAS10394]
gi|209559649|ref|YP_002286121.1| recombination protein RecR [Streptococcus pyogenes NZ131]
gi|306827068|ref|ZP_07460366.1| recombination protein R [Streptococcus pyogenes ATCC 10782]
gi|54039041|sp|P65995|RECR_STRP3 RecName: Full=Recombination protein recR
gi|54039042|sp|P65996|RECR_STRP8 RecName: Full=Recombination protein recR
gi|54041800|sp|P65994|RECR_STRP1 RecName: Full=Recombination protein recR
gi|68053075|sp|Q5XB92|RECR_STRP6 RecName: Full=Recombination protein recR
gi|123639623|sp|Q48SP7|RECR_STRPM RecName: Full=Recombination protein recR
gi|166223504|sp|Q1JAX6|RECR_STRPB RecName: Full=Recombination protein recR
gi|166223505|sp|Q1JL26|RECR_STRPC RecName: Full=Recombination protein recR
gi|166223506|sp|Q1JG49|RECR_STRPD RecName: Full=Recombination protein recR
gi|172046750|sp|Q1J5W6|RECR_STRPF RecName: Full=Recombination protein recR
gi|226726312|sp|B5XM64|RECR_STRPZ RecName: Full=Recombination protein recR
gi|13622521|gb|AAK34234.1| putative recombination protein [Streptococcus pyogenes M1 GAS]
gi|19748579|gb|AAL98016.1| putative recombination protein [Streptococcus pyogenes MGAS8232]
gi|21904823|gb|AAM79692.1| recombination protein recR [Streptococcus pyogenes MGAS315]
gi|71802910|gb|AAX72263.1| recombination protein [Streptococcus pyogenes MGAS6180]
gi|71853754|gb|AAZ51777.1| recombination protein [Streptococcus pyogenes MGAS5005]
gi|94542344|gb|ABF32393.1| recombination protein [Streptococcus pyogenes MGAS9429]
gi|94544247|gb|ABF34295.1| Recombination protein recR [Streptococcus pyogenes MGAS10270]
gi|94546235|gb|ABF36282.1| Recombination protein recR [Streptococcus pyogenes MGAS2096]
gi|209540850|gb|ACI61426.1| Recombination protein recR [Streptococcus pyogenes NZ131]
gi|304430814|gb|EFM33825.1| recombination protein R [Streptococcus pyogenes ATCC 10782]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|261341082|ref|ZP_05968940.1| recombination protein RecR [Enterobacter cancerogenus ATCC 35316]
gi|288316756|gb|EFC55694.1| recombination protein RecR [Enterobacter cancerogenus ATCC 35316]
Length = 201
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|259909220|ref|YP_002649576.1| Recombination protein [Erwinia pyrifoliae Ep1/96]
gi|224964842|emb|CAX56364.1| Recombination protein [Erwinia pyrifoliae Ep1/96]
gi|283479270|emb|CAY75186.1| Recombination protein recR [Erwinia pyrifoliae DSM 12163]
gi|310766876|gb|ADP11826.1| Recombination protein [Erwinia sp. Ejp617]
Length = 201
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + +I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDICTICANPRRQQNGLICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEKESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQKF 199
>gi|116629041|ref|YP_814213.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus
gasseri ATCC 33323]
gi|282852747|ref|ZP_06262089.1| recombination protein RecR [Lactobacillus gasseri 224-1]
gi|311111163|ref|ZP_07712560.1| recombination protein RecR [Lactobacillus gasseri MV-22]
gi|122273961|sp|Q045U7|RECR_LACGA RecName: Full=Recombination protein recR
gi|116094623|gb|ABJ59775.1| DNA replication and repair protein RecR [Lactobacillus gasseri ATCC
33323]
gi|282556489|gb|EFB62109.1| recombination protein RecR [Lactobacillus gasseri 224-1]
gi|311066317|gb|EFQ46657.1| recombination protein RecR [Lactobacillus gasseri MV-22]
Length = 199
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + E + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLIQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|268318941|ref|YP_003292597.1| Recombination protein recR [Lactobacillus johnsonii FI9785]
gi|262397316|emb|CAX66330.1| Recombination protein recR [Lactobacillus johnsonii FI9785]
Length = 199
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC DQ RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDQNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|262372599|ref|ZP_06065878.1| recombination protein RecR [Acinetobacter junii SH205]
gi|262312624|gb|EEY93709.1| recombination protein RecR [Acinetobacter junii SH205]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 125/194 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + E L++ L +P GP+SA+R LHL+ K + L+ A+ + + C IC
Sbjct: 1 MFSERFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALSYALHEASSHIHECRICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC +RD++++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTENEICDICASTERDSNLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L++R+ +I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+
Sbjct: 121 IGIPYLVQRLSEGQIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|300362309|ref|ZP_07058485.1| recombination protein R [Lactobacillus gasseri JV-V03]
gi|300353300|gb|EFJ69172.1| recombination protein R [Lactobacillus gasseri JV-V03]
Length = 199
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + E + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|222153386|ref|YP_002562563.1| recombination protein RecR [Streptococcus uberis 0140J]
gi|254790787|sp|B9DUS1|RECR_STRU0 RecName: Full=Recombination protein recR
gi|222114199|emb|CAR42745.1| recombination protein RecR [Streptococcus uberis 0140J]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC D RD S+I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCSICTDPSRDKSMILVVEDSKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKTLITRLMDSDVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|329666791|gb|AEB92739.1| recombination protein RecR [Lactobacillus johnsonii DPC 6026]
Length = 199
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDSNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGILSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|297624594|ref|YP_003706028.1| recombination protein RecR [Truepera radiovictrix DSM 17093]
gi|297165774|gb|ADI15485.1| recombination protein RecR [Truepera radiovictrix DSM 17093]
Length = 196
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L R+PG GP+SA+R +L + E+ + LAEA+ N + C C N
Sbjct: 3 YPPALTQLIRELGRLPGIGPKSAQRLAFYLFNQPEEDVKSLAEALLNAKGNLRQCERCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C++C D R+ +I VVE ADL A+ERS + LYHVL G+LSP++ +GP+ +
Sbjct: 63 ITDQEVCSVCRDPGREQGLICVVEAPADLLAIERSGEYSGLYHVLHGALSPMNGVGPDQL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
IQ L+ R+ +RE+I A + T+EG+ TA Y+ L + V +R+AYG+P+G +L+Y
Sbjct: 123 TIQPLLARL--GGVREVILATATTVEGEATAMYLARLLGELKVPTSRIAYGLPVGGDLEY 180
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI +R L
Sbjct: 181 ADEVTLGRAISNRRPL 196
>gi|313890725|ref|ZP_07824350.1| recombination protein RecR [Streptococcus pseudoporcinus SPIN
20026]
gi|332523484|ref|ZP_08399736.1| recombination protein RecR [Streptococcus porcinus str. Jelinkova
176]
gi|313120826|gb|EFR43940.1| recombination protein RecR [Streptococcus pseudoporcinus SPIN
20026]
gi|332314748|gb|EGJ27733.1| recombination protein RecR [Streptococcus porcinus str. Jelinkova
176]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIESYSKLPGIGVKTATRLAFYTISMSDDDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC+D RD S I+VVE+ D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCSICMDPSRDKSQILVVEESKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++LI R+ ++E+I A SAT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKALITRLMDSDVQEVIIATSATADGEATSMYISRILKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|217976470|ref|YP_002360617.1| recombination protein RecR [Methylocella silvestris BL2]
gi|254790777|sp|B8EP17|RECR_METSB RecName: Full=Recombination protein recR
gi|217501846|gb|ACK49255.1| recombination protein RecR [Methylocella silvestris BL2]
Length = 201
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 118/201 (58%), Positives = 155/201 (77%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I G EIE LI++LAR+PG GPRSARRA LHL++K+E+L GPLAEAM + + C
Sbjct: 1 MGDRICGPEIERLIQLLARLPGLGPRSARRAALHLIRKREELFGPLAEAMRVARDTIVSC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVD+ DPC IC D++RD S +IVVE V DLWALERS AV YHVLGG LSPLD +
Sbjct: 61 SVCGNVDSCDPCTICRDERRDPSTLIVVETVGDLWALERSGAVKGRYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I SLIER+ I E++ A++AT++GQTTAHY+ D + ++V+ TRLA+G+P+G
Sbjct: 121 GPKDLNISSLIERVAAGGISEVVLAVNATVDGQTTAHYVTDLISHLNVRTTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R+RT
Sbjct: 181 GELDYLDEGTLAAALRARTDF 201
>gi|323140456|ref|ZP_08075384.1| recombination protein RecR [Phascolarctobacterium sp. YIT 12067]
gi|322415024|gb|EFY05815.1| recombination protein RecR [Phascolarctobacterium sp. YIT 12067]
Length = 199
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + I + + NL + L R+PG G ++A R H++ + + LA A++ ++ C
Sbjct: 1 MARMI--RPLANLYEQLRRLPGIGSKTAMRLAYHVIDMPAEDVKQLAAALSGAKEQIHYC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N+ +D C IC D RD+ I VVE D+ A+ERS + LYHVL G LSPLD I
Sbjct: 59 SRCFNLTDSDVCEICRDSSRDSFTICVVEQPQDIAAMERSHGYHGLYHVLHGVLSPLDGI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I+ L+ R++ + + E+I A ++ +EG+ TA Y+ LK + + ++R+A+G+PMG
Sbjct: 119 GPEKLRIRELLLRLQQESVSEIIIATNSDVEGEATATYLAQLLKPVGITVSRIAHGLPMG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ +A+ +R +
Sbjct: 179 GDLEYADEITLSKALENRRTM 199
>gi|139473554|ref|YP_001128270.1| recombination protein RecR [Streptococcus pyogenes str. Manfredo]
gi|166223507|sp|A2RDV9|RECR_STRPG RecName: Full=Recombination protein recR
gi|134271801|emb|CAM30034.1| recombination protein RecR [Streptococcus pyogenes str. Manfredo]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD + I+VVED D+ A+E+ + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYRGYYHVLHGLISPMNGMGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|262283027|ref|ZP_06060794.1| recombination protein recR [Streptococcus sp. 2_1_36FAA]
gi|262261279|gb|EEY79978.1| recombination protein recR [Streptococcus sp. 2_1_36FAA]
Length = 198
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D+ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDEDPCAICRDESRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|323499525|ref|ZP_08104495.1| recombination protein RecR [Vibrio sinaloensis DSM 21326]
gi|323315398|gb|EGA68439.1| recombination protein RecR [Vibrio sinaloensis DSM 21326]
Length = 200
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKESQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|288904860|ref|YP_003430082.1| recombination protein RecR [Streptococcus gallolyticus UCN34]
gi|288731586|emb|CBI13141.1| recombination protein RecR [Streptococcus gallolyticus UCN34]
Length = 198
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCNICTDETRDRSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|262066083|ref|ZP_06025695.1| recombination protein RecR [Fusobacterium periodonticum ATCC 33693]
gi|291380177|gb|EFE87695.1| recombination protein RecR [Fusobacterium periodonticum ATCC 33693]
Length = 197
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + + V CS+CG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SLIER+ + I E+I A + +EG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLIERLGKEDIEEIILATNPNLEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|260776400|ref|ZP_05885295.1| recombination protein RecR [Vibrio coralliilyticus ATCC BAA-450]
gi|260607623|gb|EEX33888.1| recombination protein RecR [Vibrio coralliilyticus ATCC BAA-450]
Length = 199
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEETCHICTNPKRQENGQICVVESPADIAAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ + E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDVSEVILATNPTVEGEATAHYIAELCKEHQVQASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|254412067|ref|ZP_05025842.1| recombination protein RecR [Microcoleus chthonoplastes PCC 7420]
gi|196181033|gb|EDX76022.1| recombination protein RecR [Microcoleus chthonoplastes PCC 7420]
Length = 189
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ L R+PG GP++A+R LH++K+ E + LA+A+ +V LC +C ++ C
Sbjct: 2 IEQLQRLPGVGPKTAQRLALHIIKRSEDEVKALAQALIEAKKQVGLCQVCFHLSAESVCD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC + RD + + VV D D+ ALE+++ YHVLGG +SP+D IGPE + ++ L+ R
Sbjct: 62 ICRNPNRDKTTLCVVADSRDVIALEKTREYRGNYHVLGGVISPMDGIGPEQLHVEQLVRR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ +KI+E+I AIS ++EG+TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 122 VSQQKIQEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180
Query: 194 AIRSRTVL 201
A+ R L
Sbjct: 181 ALEGRREL 188
>gi|306833024|ref|ZP_07466156.1| recombination protein R [Streptococcus bovis ATCC 700338]
gi|304424923|gb|EFM28057.1| recombination protein R [Streptococcus bovis ATCC 700338]
Length = 198
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC DQ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCNICTDQTRDHSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|324993373|gb|EGC25293.1| recombination protein R [Streptococcus sanguinis SK405]
gi|325690164|gb|EGD32168.1| recombination protein R [Streptococcus sanguinis SK115]
gi|325697103|gb|EGD38990.1| recombination protein R [Streptococcus sanguinis SK160]
gi|327473368|gb|EGF18788.1| recombination protein R [Streptococcus sanguinis SK408]
gi|327489501|gb|EGF21294.1| recombination protein R [Streptococcus sanguinis SK1058]
Length = 198
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGVKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|328956612|ref|YP_004373998.1| recombination protein RecR [Carnobacterium sp. 17-4]
gi|328672936|gb|AEB28982.1| recombination protein RecR [Carnobacterium sp. 17-4]
Length = 198
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 121/196 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG G ++A R + +E+ + A+++ + + CS CG
Sbjct: 3 YPEPISKLMDSYMKLPGIGAKTAARLAFFTIDMREEDVTDFAKSLISAKRDLHYCSNCGQ 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S ++VVED D+ ALE+ + + LYHVL G LSP++ GPEDI
Sbjct: 63 ITEDDPCQICQDKSRDRSTVLVVEDPKDVMALEKMREYHGLYHVLHGVLSPIEGTGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI+R++ +I E+I A +A+ EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIPSLIKRLQSDEINEVIIATNASAEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R L
Sbjct: 183 ADEITLLKAVEGRREL 198
>gi|315223280|ref|ZP_07865141.1| recombination protein RecR [Streptococcus anginosus F0211]
gi|315187712|gb|EFU21466.1| recombination protein RecR [Streptococcus anginosus F0211]
Length = 198
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D+ RD S I+VVED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCAICTDETRDQSTILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|260914407|ref|ZP_05920876.1| recombination protein R [Pasteurella dagmatis ATCC 43325]
gi|260631508|gb|EEX49690.1| recombination protein R [Pasteurella dagmatis ATCC 43325]
Length = 200
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C
Sbjct: 3 TSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRNGGMDLARALTEAMSKIGHCTQCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEEVCTICNNSRRQHSGLLCVVEQPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG TA+YI + +VK+TR+A+GIP+G EL+
Sbjct: 123 IGLHLLQQRLQEESFHEVILATNPTVEGDATANYIAEICMQHNVKVTRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R L
Sbjct: 183 MVDGTTLTHSFLGRRQL 199
>gi|271499627|ref|YP_003332652.1| recombination protein RecR [Dickeya dadantii Ech586]
gi|270343182|gb|ACZ75947.1| recombination protein RecR [Dickeya dadantii Ech586]
Length = 201
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C+IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCSICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLASETISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|15800201|ref|NP_286213.1| recombination protein RecR [Escherichia coli O157:H7 EDL933]
gi|15829779|ref|NP_308552.1| recombination protein RecR [Escherichia coli O157:H7 str. Sakai]
gi|16128456|ref|NP_415005.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655]
gi|24111855|ref|NP_706365.1| recombination protein RecR [Shigella flexneri 2a str. 301]
gi|30061972|ref|NP_836143.1| recombination protein RecR [Shigella flexneri 2a str. 2457T]
gi|74311051|ref|YP_309470.1| recombination protein RecR [Shigella sonnei Ss046]
gi|89107341|ref|AP_001121.1| gap repair protein [Escherichia coli str. K-12 substr. W3110]
gi|91209546|ref|YP_539532.1| recombination protein RecR [Escherichia coli UTI89]
gi|110804499|ref|YP_688019.1| recombination protein RecR [Shigella flexneri 5 str. 8401]
gi|117622729|ref|YP_851642.1| recombination protein RecR [Escherichia coli APEC O1]
gi|157157829|ref|YP_001461661.1| recombination protein RecR [Escherichia coli E24377A]
gi|157159999|ref|YP_001457317.1| recombination protein RecR [Escherichia coli HS]
gi|168747850|ref|ZP_02772872.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4113]
gi|168754579|ref|ZP_02779586.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4401]
gi|168760371|ref|ZP_02785378.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4501]
gi|168768429|ref|ZP_02793436.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4486]
gi|168777170|ref|ZP_02802177.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4196]
gi|168778967|ref|ZP_02803974.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4076]
gi|168786325|ref|ZP_02811332.1| recombination protein RecR [Escherichia coli O157:H7 str. EC869]
gi|168798038|ref|ZP_02823045.1| recombination protein RecR [Escherichia coli O157:H7 str. EC508]
gi|170021140|ref|YP_001726094.1| recombination protein RecR [Escherichia coli ATCC 8739]
gi|170080057|ref|YP_001729377.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B]
gi|170682989|ref|YP_001742616.1| recombination protein RecR [Escherichia coli SMS-3-5]
gi|187730170|ref|YP_001879181.1| recombination protein RecR [Shigella boydii CDC 3083-94]
gi|188491938|ref|ZP_02999208.1| recombination protein RecR [Escherichia coli 53638]
gi|191167493|ref|ZP_03029306.1| recombination protein RecR [Escherichia coli B7A]
gi|193064133|ref|ZP_03045217.1| recombination protein RecR [Escherichia coli E22]
gi|193067582|ref|ZP_03048549.1| recombination protein RecR [Escherichia coli E110019]
gi|194429036|ref|ZP_03061568.1| recombination protein RecR [Escherichia coli B171]
gi|194437506|ref|ZP_03069603.1| recombination protein RecR [Escherichia coli 101-1]
gi|195936035|ref|ZP_03081417.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4024]
gi|208806900|ref|ZP_03249237.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4206]
gi|208814945|ref|ZP_03256124.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4045]
gi|208822864|ref|ZP_03263182.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4042]
gi|209396018|ref|YP_002269122.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4115]
gi|209917688|ref|YP_002291772.1| recombination protein RecR [Escherichia coli SE11]
gi|215485552|ref|YP_002327983.1| recombination protein RecR [Escherichia coli O127:H6 str. E2348/69]
gi|217325942|ref|ZP_03442026.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14588]
gi|218549860|ref|YP_002383651.1| recombination protein RecR [Escherichia fergusonii ATCC 35469]
gi|218553038|ref|YP_002385951.1| recombination protein RecR [Escherichia coli IAI1]
gi|218557382|ref|YP_002390295.1| recombination protein RecR [Escherichia coli S88]
gi|218688335|ref|YP_002396547.1| recombination protein RecR [Escherichia coli ED1a]
gi|218693934|ref|YP_002401601.1| recombination protein RecR [Escherichia coli 55989]
gi|218698616|ref|YP_002406245.1| recombination protein RecR [Escherichia coli IAI39]
gi|227884515|ref|ZP_04002320.1| recombination protein RecR [Escherichia coli 83972]
gi|237707530|ref|ZP_04538011.1| recombination protein recR [Escherichia sp. 3_2_53FAA]
gi|238899759|ref|YP_002925555.1| gap repair protein [Escherichia coli BW2952]
gi|253774538|ref|YP_003037369.1| recombination protein RecR [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160541|ref|YP_003043649.1| recombination protein RecR [Escherichia coli B str. REL606]
gi|254791655|ref|YP_003076492.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14359]
gi|256020443|ref|ZP_05434308.1| recombination protein RecR [Shigella sp. D9]
gi|256023910|ref|ZP_05437775.1| recombination protein RecR [Escherichia sp. 4_1_40B]
gi|260842672|ref|YP_003220450.1| gap repair protein RecR [Escherichia coli O103:H2 str. 12009]
gi|260853695|ref|YP_003227586.1| gap repair protein RecR [Escherichia coli O26:H11 str. 11368]
gi|260866633|ref|YP_003233035.1| gap repair protein RecR [Escherichia coli O111:H- str. 11128]
gi|261223954|ref|ZP_05938235.1| gap repair protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261256332|ref|ZP_05948865.1| gap repair protein RecR [Escherichia coli O157:H7 str. FRIK966]
gi|291281378|ref|YP_003498196.1| Recombination protein recR [Escherichia coli O55:H7 str. CB9615]
gi|293408621|ref|ZP_06652460.1| recombination protein RecR [Escherichia coli B354]
gi|293413725|ref|ZP_06656374.1| recombination protein RecR [Escherichia coli B185]
gi|293418541|ref|ZP_06660976.1| recombination protein RecR [Escherichia coli B088]
gi|297519065|ref|ZP_06937451.1| recombination protein RecR [Escherichia coli OP50]
gi|300818194|ref|ZP_07098405.1| recombination protein RecR [Escherichia coli MS 107-1]
gi|300820281|ref|ZP_07100433.1| recombination protein RecR [Escherichia coli MS 119-7]
gi|300903257|ref|ZP_07121186.1| recombination protein RecR [Escherichia coli MS 84-1]
gi|300919877|ref|ZP_07136344.1| recombination protein RecR [Escherichia coli MS 115-1]
gi|300924200|ref|ZP_07140192.1| recombination protein RecR [Escherichia coli MS 182-1]
gi|300930223|ref|ZP_07145637.1| recombination protein RecR [Escherichia coli MS 187-1]
gi|300935750|ref|ZP_07150715.1| recombination protein RecR [Escherichia coli MS 21-1]
gi|300947871|ref|ZP_07162021.1| recombination protein RecR [Escherichia coli MS 116-1]
gi|300958041|ref|ZP_07170205.1| recombination protein RecR [Escherichia coli MS 175-1]
gi|300987888|ref|ZP_07178437.1| recombination protein RecR [Escherichia coli MS 45-1]
gi|301022521|ref|ZP_07186395.1| recombination protein RecR [Escherichia coli MS 69-1]
gi|301023019|ref|ZP_07186829.1| recombination protein RecR [Escherichia coli MS 196-1]
gi|301049681|ref|ZP_07196629.1| recombination protein RecR [Escherichia coli MS 185-1]
gi|301301626|ref|ZP_07207761.1| recombination protein RecR [Escherichia coli MS 124-1]
gi|301330660|ref|ZP_07223262.1| recombination protein RecR [Escherichia coli MS 78-1]
gi|301647401|ref|ZP_07247211.1| recombination protein RecR [Escherichia coli MS 146-1]
gi|306813061|ref|ZP_07447254.1| recombination protein RecR [Escherichia coli NC101]
gi|307137116|ref|ZP_07496472.1| recombination protein RecR [Escherichia coli H736]
gi|307314967|ref|ZP_07594556.1| recombination protein RecR [Escherichia coli W]
gi|309794792|ref|ZP_07689213.1| recombination protein RecR [Escherichia coli MS 145-7]
gi|312964463|ref|ZP_07778757.1| recombination protein RecR [Escherichia coli 2362-75]
gi|312970571|ref|ZP_07784752.1| recombination protein RecR [Escherichia coli 1827-70]
gi|331640996|ref|ZP_08342131.1| recombination protein RecR [Escherichia coli H736]
gi|331645658|ref|ZP_08346761.1| recombination protein RecR [Escherichia coli M605]
gi|331651412|ref|ZP_08352437.1| recombination protein RecR [Escherichia coli M718]
gi|331656530|ref|ZP_08357492.1| recombination protein RecR [Escherichia coli TA206]
gi|331661855|ref|ZP_08362778.1| recombination protein RecR [Escherichia coli TA143]
gi|331666832|ref|ZP_08367706.1| recombination protein RecR [Escherichia coli TA271]
gi|331672014|ref|ZP_08372810.1| recombination protein RecR [Escherichia coli TA280]
gi|331676146|ref|ZP_08376858.1| recombination protein RecR [Escherichia coli H591]
gi|332281624|ref|ZP_08394037.1| recombination protein recR [Shigella sp. D9]
gi|67471985|sp|P0A7H6|RECR_ECOLI RecName: Full=Recombination protein recR
gi|67471986|sp|P0A7H7|RECR_ECOL6 RecName: Full=Recombination protein recR
gi|67471987|sp|P0A7H8|RECR_ECO57 RecName: Full=Recombination protein recR
gi|67471988|sp|P0A7H9|RECR_SHIFL RecName: Full=Recombination protein recR
gi|122424726|sp|Q1RF63|RECR_ECOUT RecName: Full=Recombination protein recR
gi|123343097|sp|Q0T7B2|RECR_SHIF8 RecName: Full=Recombination protein recR
gi|123617861|sp|Q3Z4S7|RECR_SHISS RecName: Full=Recombination protein recR
gi|166221937|sp|A1A8D8|RECR_ECOK1 RecName: Full=Recombination protein recR
gi|166918738|sp|A7ZIN2|RECR_ECO24 RecName: Full=Recombination protein recR
gi|166918739|sp|A7ZXD0|RECR_ECOHS RecName: Full=Recombination protein recR
gi|189029361|sp|B1IZC2|RECR_ECOLC RecName: Full=Recombination protein recR
gi|226726302|sp|B5Z3Y2|RECR_ECO5E RecName: Full=Recombination protein recR
gi|226726303|sp|B6I0C4|RECR_ECOSE RecName: Full=Recombination protein recR
gi|226738999|sp|B7MDZ4|RECR_ECO45 RecName: Full=Recombination protein recR
gi|226739000|sp|B7NIF8|RECR_ECO7I RecName: Full=Recombination protein recR
gi|226739001|sp|B7M3W4|RECR_ECO8A RecName: Full=Recombination protein recR
gi|226739003|sp|B1LJM9|RECR_ECOSM RecName: Full=Recombination protein recR
gi|226739004|sp|B7LLP8|RECR_ESCF3 RecName: Full=Recombination protein recR
gi|229470342|sp|B2U4S5|RECR_SHIB3 RecName: Full=Recombination protein recR
gi|229890148|sp|B1XFQ9|RECR_ECODH RecName: Full=Recombination protein recR
gi|254790766|sp|B7UKF2|RECR_ECO27 RecName: Full=Recombination protein recR
gi|254790767|sp|B7L797|RECR_ECO55 RecName: Full=Recombination protein recR
gi|254790768|sp|B7MQI7|RECR_ECO81 RecName: Full=Recombination protein recR
gi|259563694|sp|C4ZUS6|RECR_ECOBW RecName: Full=Recombination protein recR
gi|12513342|gb|AAG54821.1|AE005226_4 recombination and repair [Escherichia coli O157:H7 str. EDL933]
gi|42697|emb|CAA33768.1| unnamed protein product [Escherichia coli K-12]
gi|1773154|gb|AAB40226.1| recR [Escherichia coli]
gi|1786678|gb|AAC73574.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655]
gi|13359982|dbj|BAB33948.1| recombination protein RecR [Escherichia coli O157:H7 str. Sakai]
gi|24050650|gb|AAN42072.1| recombination protein RecR [Shigella flexneri 2a str. 301]
gi|30040216|gb|AAP15949.1| recombination protein RecR [Shigella flexneri 2a str. 2457T]
gi|73854528|gb|AAZ87235.1| recombination and repair [Shigella sonnei Ss046]
gi|85674611|dbj|BAE76251.1| gap repair protein [Escherichia coli str. K12 substr. W3110]
gi|91071120|gb|ABE06001.1| recombination and repair protein RecR [Escherichia coli UTI89]
gi|110614047|gb|ABF02714.1| recombination and repair [Shigella flexneri 5 str. 8401]
gi|115511853|gb|ABI99927.1| recombination protein RecR [Escherichia coli APEC O1]
gi|157065679|gb|ABV04934.1| recombination protein RecR [Escherichia coli HS]
gi|157079859|gb|ABV19567.1| recombination protein RecR [Escherichia coli E24377A]
gi|169756068|gb|ACA78767.1| recombination protein RecR [Escherichia coli ATCC 8739]
gi|169887892|gb|ACB01599.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B]
gi|170520707|gb|ACB18885.1| recombination protein RecR [Escherichia coli SMS-3-5]
gi|187427162|gb|ACD06436.1| recombination protein RecR [Shigella boydii CDC 3083-94]
gi|187767554|gb|EDU31398.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4196]
gi|188017689|gb|EDU55811.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4113]
gi|188487137|gb|EDU62240.1| recombination protein RecR [Escherichia coli 53638]
gi|189002997|gb|EDU71983.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4076]
gi|189357959|gb|EDU76378.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4401]
gi|189362411|gb|EDU80830.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4486]
gi|189369096|gb|EDU87512.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4501]
gi|189373699|gb|EDU92115.1| recombination protein RecR [Escherichia coli O157:H7 str. EC869]
gi|189379340|gb|EDU97756.1| recombination protein RecR [Escherichia coli O157:H7 str. EC508]
gi|190902449|gb|EDV62185.1| recombination protein RecR [Escherichia coli B7A]
gi|192929162|gb|EDV82772.1| recombination protein RecR [Escherichia coli E22]
gi|192958994|gb|EDV89430.1| recombination protein RecR [Escherichia coli E110019]
gi|194412973|gb|EDX29263.1| recombination protein RecR [Escherichia coli B171]
gi|194423675|gb|EDX39665.1| recombination protein RecR [Escherichia coli 101-1]
gi|208726701|gb|EDZ76302.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4206]
gi|208731593|gb|EDZ80281.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4045]
gi|208737057|gb|EDZ84741.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4042]
gi|209157418|gb|ACI34851.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4115]
gi|209778368|gb|ACI87496.1| recombination protein RecR [Escherichia coli]
gi|209778370|gb|ACI87497.1| recombination protein RecR [Escherichia coli]
gi|209778372|gb|ACI87498.1| recombination protein RecR [Escherichia coli]
gi|209778374|gb|ACI87499.1| recombination protein RecR [Escherichia coli]
gi|209778376|gb|ACI87500.1| recombination protein RecR [Escherichia coli]
gi|209910947|dbj|BAG76021.1| recombination protein RecR [Escherichia coli SE11]
gi|215263624|emb|CAS07955.1| gap repair protein RecR [Escherichia coli O127:H6 str. E2348/69]
gi|217322163|gb|EEC30587.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14588]
gi|218350666|emb|CAU96358.1| gap repair protein [Escherichia coli 55989]
gi|218357401|emb|CAQ90040.1| gap repair protein [Escherichia fergusonii ATCC 35469]
gi|218359806|emb|CAQ97347.1| gap repair protein [Escherichia coli IAI1]
gi|218364151|emb|CAR01816.1| gap repair protein [Escherichia coli S88]
gi|218368602|emb|CAR16339.1| gap repair protein [Escherichia coli IAI39]
gi|218425899|emb|CAR06705.1| gap repair protein [Escherichia coli ED1a]
gi|222032266|emb|CAP75005.1| Recombination protein recR [Escherichia coli LF82]
gi|226898740|gb|EEH84999.1| recombination protein recR [Escherichia sp. 3_2_53FAA]
gi|227838601|gb|EEJ49067.1| recombination protein RecR [Escherichia coli 83972]
gi|238861286|gb|ACR63284.1| gap repair protein [Escherichia coli BW2952]
gi|253325582|gb|ACT30184.1| recombination protein RecR [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972442|gb|ACT38113.1| recombination protein RecR [Escherichia coli B str. REL606]
gi|253976652|gb|ACT42322.1| recombination protein RecR [Escherichia coli BL21(DE3)]
gi|254591055|gb|ACT70416.1| gap repair protein [Escherichia coli O157:H7 str. TW14359]
gi|257752344|dbj|BAI23846.1| gap repair protein RecR [Escherichia coli O26:H11 str. 11368]
gi|257757819|dbj|BAI29316.1| gap repair protein RecR [Escherichia coli O103:H2 str. 12009]
gi|257762989|dbj|BAI34484.1| gap repair protein RecR [Escherichia coli O111:H- str. 11128]
gi|260450342|gb|ACX40764.1| recombination protein RecR [Escherichia coli DH1]
gi|281177642|dbj|BAI53972.1| recombination protein RecR [Escherichia coli SE15]
gi|281599811|gb|ADA72795.1| Recombination protein recR [Shigella flexneri 2002017]
gi|284920281|emb|CBG33340.1| recombination protein [Escherichia coli 042]
gi|290761251|gb|ADD55212.1| Recombination protein recR [Escherichia coli O55:H7 str. CB9615]
gi|291325069|gb|EFE64484.1| recombination protein RecR [Escherichia coli B088]
gi|291433783|gb|EFF06756.1| recombination protein RecR [Escherichia coli B185]
gi|291471799|gb|EFF14282.1| recombination protein RecR [Escherichia coli B354]
gi|294493990|gb|ADE92746.1| recombination protein RecR [Escherichia coli IHE3034]
gi|299880982|gb|EFI89193.1| recombination protein RecR [Escherichia coli MS 196-1]
gi|300298574|gb|EFJ54959.1| recombination protein RecR [Escherichia coli MS 185-1]
gi|300315308|gb|EFJ65092.1| recombination protein RecR [Escherichia coli MS 175-1]
gi|300397482|gb|EFJ81020.1| recombination protein RecR [Escherichia coli MS 69-1]
gi|300404696|gb|EFJ88234.1| recombination protein RecR [Escherichia coli MS 84-1]
gi|300407628|gb|EFJ91166.1| recombination protein RecR [Escherichia coli MS 45-1]
gi|300413093|gb|EFJ96403.1| recombination protein RecR [Escherichia coli MS 115-1]
gi|300419653|gb|EFK02964.1| recombination protein RecR [Escherichia coli MS 182-1]
gi|300452549|gb|EFK16169.1| recombination protein RecR [Escherichia coli MS 116-1]
gi|300459050|gb|EFK22543.1| recombination protein RecR [Escherichia coli MS 21-1]
gi|300461878|gb|EFK25371.1| recombination protein RecR [Escherichia coli MS 187-1]
gi|300527066|gb|EFK48135.1| recombination protein RecR [Escherichia coli MS 119-7]
gi|300529085|gb|EFK50147.1| recombination protein RecR [Escherichia coli MS 107-1]
gi|300843123|gb|EFK70883.1| recombination protein RecR [Escherichia coli MS 124-1]
gi|300843321|gb|EFK71081.1| recombination protein RecR [Escherichia coli MS 78-1]
gi|301074456|gb|EFK89262.1| recombination protein RecR [Escherichia coli MS 146-1]
gi|305853824|gb|EFM54263.1| recombination protein RecR [Escherichia coli NC101]
gi|306905606|gb|EFN36137.1| recombination protein RecR [Escherichia coli W]
gi|307552378|gb|ADN45153.1| recombination and repair protein RecR [Escherichia coli ABU 83972]
gi|307628059|gb|ADN72363.1| recombination protein RecR [Escherichia coli UM146]
gi|308121445|gb|EFO58707.1| recombination protein RecR [Escherichia coli MS 145-7]
gi|309700732|emb|CBJ00028.1| recombination protein [Escherichia coli ETEC H10407]
gi|310337220|gb|EFQ02358.1| recombination protein RecR [Escherichia coli 1827-70]
gi|312290940|gb|EFR18816.1| recombination protein RecR [Escherichia coli 2362-75]
gi|312945049|gb|ADR25876.1| recombination protein RecR [Escherichia coli O83:H1 str. NRG 857C]
gi|313646898|gb|EFS11355.1| recombination protein RecR [Shigella flexneri 2a str. 2457T]
gi|313848552|emb|CAQ30945.2| recombination and repair, subunit of RecFOR complex [Escherichia
coli BL21(DE3)]
gi|315059751|gb|ADT74078.1| gap repair protein [Escherichia coli W]
gi|315135153|dbj|BAJ42312.1| recombination protein recR [Escherichia coli DH1]
gi|315256302|gb|EFU36270.1| recombination protein RecR [Escherichia coli MS 85-1]
gi|315289905|gb|EFU49295.1| recombination protein RecR [Escherichia coli MS 110-3]
gi|315294236|gb|EFU53587.1| recombination protein RecR [Escherichia coli MS 153-1]
gi|315297998|gb|EFU57268.1| recombination protein RecR [Escherichia coli MS 16-3]
gi|315616586|gb|EFU97203.1| recombination protein RecR [Escherichia coli 3431]
gi|320176554|gb|EFW51598.1| Recombination protein RecR [Shigella dysenteriae CDC 74-1112]
gi|320181085|gb|EFW56005.1| Recombination protein RecR [Shigella boydii ATCC 9905]
gi|320192890|gb|EFW67530.1| Recombination protein RecR [Escherichia coli O157:H7 str. EC1212]
gi|320197051|gb|EFW71670.1| Recombination protein RecR [Escherichia coli WV_060327]
gi|320201718|gb|EFW76294.1| Recombination protein RecR [Escherichia coli EC4100B]
gi|320638466|gb|EFX08180.1| recombination protein RecR [Escherichia coli O157:H7 str. G5101]
gi|320643847|gb|EFX12970.1| recombination protein RecR [Escherichia coli O157:H- str. 493-89]
gi|320649198|gb|EFX17776.1| recombination protein RecR [Escherichia coli O157:H- str. H 2687]
gi|320656091|gb|EFX24007.1| recombination protein RecR [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661241|gb|EFX28672.1| recombination protein RecR [Escherichia coli O55:H7 str. USDA 5905]
gi|320665217|gb|EFX32310.1| recombination protein RecR [Escherichia coli O157:H7 str. LSU-61]
gi|323153374|gb|EFZ39629.1| recombination protein RecR [Escherichia coli EPECa14]
gi|323164278|gb|EFZ50085.1| recombination protein RecR [Shigella sonnei 53G]
gi|323170568|gb|EFZ56218.1| recombination protein RecR [Escherichia coli LT-68]
gi|323178253|gb|EFZ63831.1| recombination protein RecR [Escherichia coli 1180]
gi|323184697|gb|EFZ70068.1| recombination protein RecR [Escherichia coli 1357]
gi|323379684|gb|ADX51952.1| recombination protein RecR [Escherichia coli KO11]
gi|323938658|gb|EGB34907.1| recombination protein RecR [Escherichia coli E1520]
gi|323943277|gb|EGB39433.1| recombination protein RecR [Escherichia coli E482]
gi|323945255|gb|EGB41312.1| recombination protein RecR [Escherichia coli H120]
gi|323952917|gb|EGB48785.1| recombination protein RecR [Escherichia coli H252]
gi|323958540|gb|EGB54244.1| recombination protein RecR [Escherichia coli H263]
gi|323963461|gb|EGB59023.1| recombination protein RecR [Escherichia coli H489]
gi|323965158|gb|EGB60617.1| recombination protein RecR [Escherichia coli M863]
gi|323972326|gb|EGB67536.1| recombination protein RecR [Escherichia coli TA007]
gi|323976044|gb|EGB71137.1| recombination protein RecR [Escherichia coli TW10509]
gi|324010053|gb|EGB79272.1| recombination protein RecR [Escherichia coli MS 57-2]
gi|324016728|gb|EGB85947.1| recombination protein RecR [Escherichia coli MS 117-3]
gi|324114697|gb|EGC08665.1| recombination protein RecR [Escherichia fergusonii B253]
gi|324116960|gb|EGC10873.1| recombination protein RecR [Escherichia coli E1167]
gi|325498240|gb|EGC96099.1| recombination protein RecR [Escherichia fergusonii ECD227]
gi|326341238|gb|EGD65030.1| Recombination protein RecR [Escherichia coli O157:H7 str. 1044]
gi|326345987|gb|EGD69726.1| Recombination protein RecR [Escherichia coli O157:H7 str. 1125]
gi|327254799|gb|EGE66415.1| recombination protein RecR [Escherichia coli STEC_7v]
gi|330910267|gb|EGH38777.1| recombination protein RecR [Escherichia coli AA86]
gi|331037794|gb|EGI10014.1| recombination protein RecR [Escherichia coli H736]
gi|331044410|gb|EGI16537.1| recombination protein RecR [Escherichia coli M605]
gi|331051153|gb|EGI23205.1| recombination protein RecR [Escherichia coli M718]
gi|331054778|gb|EGI26787.1| recombination protein RecR [Escherichia coli TA206]
gi|331060277|gb|EGI32241.1| recombination protein RecR [Escherichia coli TA143]
gi|331066056|gb|EGI37940.1| recombination protein RecR [Escherichia coli TA271]
gi|331071003|gb|EGI42362.1| recombination protein RecR [Escherichia coli TA280]
gi|331076204|gb|EGI47486.1| recombination protein RecR [Escherichia coli H591]
gi|332094161|gb|EGI99212.1| recombination protein RecR [Shigella boydii 5216-82]
gi|332103976|gb|EGJ07322.1| recombination protein recR [Shigella sp. D9]
gi|332341838|gb|AEE55172.1| recombination protein RecR [Escherichia coli UMNK88]
gi|332760765|gb|EGJ91053.1| recombination protein RecR [Shigella flexneri 4343-70]
gi|332761449|gb|EGJ91731.1| recombination protein RecR [Shigella flexneri 2747-71]
gi|332763775|gb|EGJ94013.1| recombination protein RecR [Shigella flexneri K-671]
gi|332768397|gb|EGJ98581.1| recombination protein RecR [Shigella flexneri 2930-71]
gi|333007767|gb|EGK27243.1| recombination protein RecR [Shigella flexneri K-218]
gi|333008162|gb|EGK27637.1| recombination protein RecR [Shigella flexneri VA-6]
gi|333009908|gb|EGK29343.1| recombination protein RecR [Shigella flexneri K-272]
gi|333020742|gb|EGK40002.1| recombination protein RecR [Shigella flexneri K-227]
gi|333021968|gb|EGK41216.1| recombination protein RecR [Shigella flexneri K-304]
Length = 201
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|329964827|ref|ZP_08301835.1| recombination protein RecR [Bacteroides fluxus YIT 12057]
gi|328524468|gb|EGF51536.1| recombination protein RecR [Bacteroides fluxus YIT 12057]
Length = 205
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQYPSILLEKAVSEFAKLPGIGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD+SV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVQRVSSGDIKEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEITLGRSIVNRTPF 201
>gi|254421279|ref|ZP_05034997.1| recombination protein RecR [Synechococcus sp. PCC 7335]
gi|196188768|gb|EDX83732.1| recombination protein RecR [Synechococcus sp. PCC 7335]
Length = 190
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ R+PG GP+SA+R +H++K+ E + LA A+ + N+V CS C ++ C
Sbjct: 2 IEEFQRLPGIGPKSAQRLAMHMLKRPEAEVRALANALIDAKNQVGQCSQCFHLSAEPVCN 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC Q RD + I VV + D+ ALE+++ YHVLGG +SP+D IGPE + + L+ R
Sbjct: 62 ICRSQSRDRNTICVVAESKDVIALEKTREYKGRYHVLGGLISPMDGIGPEQLNVGQLVHR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ + I E I AIS +IEG TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 122 VNREGISEAILAISPSIEGDTTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180
Query: 194 AIRSRTVL 201
A+ R L
Sbjct: 181 ALEGRREL 188
>gi|323493360|ref|ZP_08098483.1| recombination protein RecR [Vibrio brasiliensis LMG 20546]
gi|323312446|gb|EGA65587.1| recombination protein RecR [Vibrio brasiliensis LMG 20546]
Length = 199
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K +V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDIAEVILATNPTVEGEATAHYIAELCKESNVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|313894384|ref|ZP_07827949.1| recombination protein RecR [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441208|gb|EFR59635.1| recombination protein RecR [Veillonella sp. oral taxon 158 str.
F0412]
Length = 198
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 115/194 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 3 NALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI +
Sbjct: 63 AQDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRV 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D
Sbjct: 123 KELIARLRDGIVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ +R +
Sbjct: 183 ELTLGGAVVNRQEM 196
>gi|310826416|ref|YP_003958773.1| recombination protein RecR [Eubacterium limosum KIST612]
gi|308738150|gb|ADO35810.1| recombination protein RecR [Eubacterium limosum KIST612]
Length = 199
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
K IE L+ L ++PG G ++A+R HL+ + + L+ A+ N+ +K+ LC C
Sbjct: 3 FYPKAIERLVTELGKLPGIGEKTAQRLAFHLIDAPAEEIEGLSNALLNVKDKIRLCPECF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ D C +C D R+ VI VV+ D++A+E+++ N LYHVL G +SPL+ IGP+D
Sbjct: 63 SITDGDRCDVCADPNRNRRVICVVQSTKDIFAIEKTREYNGLYHVLHGVISPLEGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + L+ RI I E+I A + T EG+ TA Y+ + + + VK+TRLA GIP+G++++
Sbjct: 123 IKAKELLLRIGENDIEEVIMATNPTPEGEATAMYLGNLISPLGVKVTRLAKGIPIGADVE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D+ T+ +A R +
Sbjct: 183 YIDEITLIKAFEGRNTI 199
>gi|262407940|ref|ZP_06084488.1| recombination protein RecR [Bacteroides sp. 2_1_22]
gi|294644003|ref|ZP_06721785.1| recombination protein RecR [Bacteroides ovatus SD CC 2a]
gi|294807757|ref|ZP_06766550.1| recombination protein RecR [Bacteroides xylanisolvens SD CC 1b]
gi|262354748|gb|EEZ03840.1| recombination protein RecR [Bacteroides sp. 2_1_22]
gi|292640656|gb|EFF58892.1| recombination protein RecR [Bacteroides ovatus SD CC 2a]
gi|294445193|gb|EFG13867.1| recombination protein RecR [Bacteroides xylanisolvens SD CC 1b]
Length = 205
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPNDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|189466061|ref|ZP_03014846.1| hypothetical protein BACINT_02426 [Bacteroides intestinalis DSM
17393]
gi|189434325|gb|EDV03310.1| hypothetical protein BACINT_02426 [Bacteroides intestinalis DSM
17393]
Length = 205
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFSSILLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCRICANPQRDDSTVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVQRVSAGGIKEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYADEVTLGRSIVNRTPF 201
>gi|191173682|ref|ZP_03035206.1| recombination protein RecR [Escherichia coli F11]
gi|300997164|ref|ZP_07181660.1| recombination protein RecR [Escherichia coli MS 200-1]
gi|190906040|gb|EDV65655.1| recombination protein RecR [Escherichia coli F11]
gi|300304299|gb|EFJ58819.1| recombination protein RecR [Escherichia coli MS 200-1]
gi|324010644|gb|EGB79863.1| recombination protein RecR [Escherichia coli MS 60-1]
Length = 201
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRKENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|240849895|ref|YP_002971284.1| recombination protein RecR [Bartonella grahamii as4aup]
gi|240267018|gb|ACS50606.1| recombination protein RecR [Bartonella grahamii as4aup]
Length = 201
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI+IL+RIPG GPRSARRA LHL+KKKE LL PL A+ KV +C
Sbjct: 1 MSKYIAGPEIERLIQILSRIPGLGPRSARRAALHLIKKKETLLEPLGAAIQAAIEKVGIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I
Sbjct: 61 SVCGNVDTIDPCSICTDLRRDDTTIIVVEDIADLWALERAKTLAARYHVLGGRLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I +LI+R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G
Sbjct: 121 GPDELNIATLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFSVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+++RT L
Sbjct: 181 GELDYLDDGTLAAAVQARTNL 201
>gi|298484196|ref|ZP_07002361.1| recombination protein RecR [Bacteroides sp. D22]
gi|299145431|ref|ZP_07038499.1| recombination protein RecR [Bacteroides sp. 3_1_23]
gi|298269609|gb|EFI11205.1| recombination protein RecR [Bacteroides sp. D22]
gi|298515922|gb|EFI39803.1| recombination protein RecR [Bacteroides sp. 3_1_23]
Length = 205
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|260590614|ref|ZP_05856072.1| recombination protein RecR [Prevotella veroralis F0319]
gi|260537439|gb|EEX20056.1| recombination protein RecR [Prevotella veroralis F0319]
Length = 202
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 135/199 (67%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + + +E ++ +++PG G ++A R LHL+++ + + +A+ ++ + + C +
Sbjct: 2 QQYSSQLLERAVEGFSQLPGVGRKTALRLVLHLLRQPVEEVESFTDAVTHVCHDIKYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ TD C+IC D +RD+SV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IGP
Sbjct: 62 CHNISDTDICSICSDPRRDSSVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I SL+ER++ +++E+I A+++T+EG TT YI KLK DVK++ +A GI +G E
Sbjct: 122 HDLSIDSLVERVDTGEVKEVILALASTMEGDTTNFYISRKLKDKDVKLSIIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSILNRTPF 200
>gi|283784299|ref|YP_003364164.1| recombination protein [Citrobacter rodentium ICC168]
gi|282947753|emb|CBG87309.1| recombination protein [Citrobacter rodentium ICC168]
Length = 201
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLSAEPLNEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 MVDGTTLSHSLAGRHKL 199
>gi|325663667|ref|ZP_08152071.1| recombination protein recR [Lachnospiraceae bacterium 4_1_37FAA]
gi|331087181|ref|ZP_08336251.1| recombination protein recR [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470160|gb|EGC73393.1| recombination protein recR [Lachnospiraceae bacterium 4_1_37FAA]
gi|330408867|gb|EGG88328.1| recombination protein recR [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 198
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I LI+ L+R+PG G +SA R H++ + + LA + N V C+ C
Sbjct: 2 DYYSSQISKLIEELSRLPGIGAKSAGRLAFHIINMPKDQVERLASTLVEARNNVRYCAQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC +RD I+VVE DL A E++ N +YHVL G++SP+ IGP
Sbjct: 62 CTLTDKELCPICGSNKRDQRTIMVVETTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ER+ + E+I A ++++EG+TTA Y+ +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELMERL-QGDVDEVIIATNSSLEGETTAMYLSKLIKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ RT L
Sbjct: 181 EYIDEVTLLRALEGRTQL 198
>gi|225018613|ref|ZP_03707805.1| hypothetical protein CLOSTMETH_02563 [Clostridium methylpentosum
DSM 5476]
gi|224948607|gb|EEG29816.1| hypothetical protein CLOSTMETH_02563 [Clostridium methylpentosum
DSM 5476]
Length = 201
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 118/195 (60%), Gaps = 2/195 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ L + A +PG G ++A R +++ ++ A A+ ++ + CS+C N
Sbjct: 7 PLKILAEQFASLPGIGMKTAWRLAFYVLTMTKEQSDEFAHAITTAHDTIKNCSVCQNYTD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D RD SVI VVE D+ A ERS+ LYHVL G +SP+D IGP+ + I+
Sbjct: 67 KLVCDICADGMRDKSVICVVESPKDVVAFERSRGFKGLYHVLHGLISPMDGIGPDQLFIK 126
Query: 129 SLIERIEV--KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ RI ++++E+I A + T+EG+ TA Y+ LK + VK+TRLAYG+P+G EL++
Sbjct: 127 QLLSRIGDPQQEVKEVIMATNPTVEGEATAMYLSKLLKPLGVKVTRLAYGVPVGGELEFA 186
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ +A+ +R L
Sbjct: 187 DEMTLSKALENRNEL 201
>gi|210634535|ref|ZP_03298152.1| hypothetical protein COLSTE_02074 [Collinsella stercoris DSM 13279]
gi|210158787|gb|EEA89758.1| hypothetical protein COLSTE_02074 [Collinsella stercoris DSM 13279]
Length = 198
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L+ L R+PG GP+SA+R +L++ + LA+A+ + N+V CS C N
Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYYLLEADAEEARRLADAILMVKNEVHFCSRCFNYA 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T D CAIC D RD + I VV + D+ A+ER+ + + LYHVLGG +SP+D+IGP+ + +
Sbjct: 65 TGDECAICEDMSRDRNRICVVGEPRDVTAIERTGSYHGLYHVLGGVISPMDKIGPDQLHV 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + I E+I A + IEG+TTA Y+ +K + + +TRLA G+P+G +L+Y D
Sbjct: 125 RELLARLGAEDIEEVIIATNPNIEGETTASYLARTIKPLGITVTRLASGLPVGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+ AI +R L
Sbjct: 185 ELTLGRAIEARRAL 198
>gi|227510685|ref|ZP_03940734.1| recombination protein RecR [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227513701|ref|ZP_03943750.1| recombination protein RecR [Lactobacillus buchneri ATCC 11577]
gi|227522509|ref|ZP_03952558.1| recombination protein RecR [Lactobacillus hilgardii ATCC 8290]
gi|227083020|gb|EEI18332.1| recombination protein RecR [Lactobacillus buchneri ATCC 11577]
gi|227090331|gb|EEI25643.1| recombination protein RecR [Lactobacillus hilgardii ATCC 8290]
gi|227189806|gb|EEI69873.1| recombination protein RecR [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 199
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + V + + + A+ + CSICGN
Sbjct: 3 YPEPIAKLIDSYMKLPGIGNKTATRLAFYTVDMNKDDVKEFSHALLATKEDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD + I+VVE D+ +E+ + + LYHVL G LSP++ GPED+
Sbjct: 63 LTDEDPCEICRDKTRDQTKILVVEQPKDIMVMEKVQEYHGLYHVLHGVLSPIEGKGPEDL 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SLI R + +++E+I A +AT EG+ TA Y+ +K +++TRLA+G+ +G++++
Sbjct: 123 NITSLIRRLQKNGEVKEVIVATNATPEGEATAMYLSKLIKPAGIRVTRLAHGLSVGTDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 183 YADEMTLFKAVQGRTEM 199
>gi|206577691|ref|YP_002240026.1| recombination protein RecR [Klebsiella pneumoniae 342]
gi|288936779|ref|YP_003440838.1| recombination protein RecR [Klebsiella variicola At-22]
gi|290510166|ref|ZP_06549536.1| recombination protein RecR [Klebsiella sp. 1_1_55]
gi|226726305|sp|B5Y0N5|RECR_KLEP3 RecName: Full=Recombination protein recR
gi|206566749|gb|ACI08525.1| recombination protein RecR [Klebsiella pneumoniae 342]
gi|288891488|gb|ADC59806.1| recombination protein RecR [Klebsiella variicola At-22]
gi|289776882|gb|EFD84880.1| recombination protein RecR [Klebsiella sp. 1_1_55]
Length = 201
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|37527699|ref|NP_931043.1| recombination protein RecR [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|73621503|sp|Q7N0P2|RECR_PHOLL RecName: Full=Recombination protein recR
gi|36787134|emb|CAE16211.1| Recombination protein RecR [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 201
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRNRSGGMRLAQALTRAMSEIGHCKYCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEQCTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ ++I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEDRLATEEISEVILATNPTVEGEATANYIAEICVQYGVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRQKI 199
>gi|237730455|ref|ZP_04560936.1| recombination protein RecR [Citrobacter sp. 30_2]
gi|226905994|gb|EEH91912.1| recombination protein RecR [Citrobacter sp. 30_2]
Length = 201
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTKAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E ++I ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESEQINELILATNPTVEGEATANYIAELCMQYGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|169633536|ref|YP_001707272.1| recombination protein, gap repair [Acinetobacter baumannii SDF]
gi|169796040|ref|YP_001713833.1| recombination protein, gap repair [Acinetobacter baumannii AYE]
gi|184158039|ref|YP_001846378.1| recombination protein RecR [Acinetobacter baumannii ACICU]
gi|213157226|ref|YP_002319271.1| recombination protein RecR [Acinetobacter baumannii AB0057]
gi|215483498|ref|YP_002325715.1| recombination protein RecR [Acinetobacter baumannii AB307-0294]
gi|239501842|ref|ZP_04661152.1| recombination protein RecR [Acinetobacter baumannii AB900]
gi|260554177|ref|ZP_05826435.1| recombinational DNA repair protein [Acinetobacter sp. RUH2624]
gi|260555082|ref|ZP_05827303.1| recombination protein RecR [Acinetobacter baumannii ATCC 19606]
gi|301345594|ref|ZP_07226335.1| recombination protein RecR [Acinetobacter baumannii AB056]
gi|301510305|ref|ZP_07235542.1| recombination protein RecR [Acinetobacter baumannii AB058]
gi|301597269|ref|ZP_07242277.1| recombination protein RecR [Acinetobacter baumannii AB059]
gi|332851690|ref|ZP_08433615.1| recombination protein RecR [Acinetobacter baumannii 6013150]
gi|332865935|ref|ZP_08436715.1| recombination protein RecR [Acinetobacter baumannii 6013113]
gi|332874499|ref|ZP_08442402.1| recombination protein RecR [Acinetobacter baumannii 6014059]
gi|169148967|emb|CAM86844.1| recombination protein, gap repair [Acinetobacter baumannii AYE]
gi|169152328|emb|CAP01250.1| recombination protein, gap repair [Acinetobacter baumannii]
gi|183209633|gb|ACC57031.1| Recombinational DNA repair protein (RecF pathway) [Acinetobacter
baumannii ACICU]
gi|193077319|gb|ABO12112.2| recombination protein gap repair [Acinetobacter baumannii ATCC
17978]
gi|213056386|gb|ACJ41288.1| recombination protein RecR [Acinetobacter baumannii AB0057]
gi|213986008|gb|ACJ56307.1| recombination protein RecR [Acinetobacter baumannii AB307-0294]
gi|260404683|gb|EEW98195.1| recombinational DNA repair protein [Acinetobacter sp. RUH2624]
gi|260411624|gb|EEX04921.1| recombination protein RecR [Acinetobacter baumannii ATCC 19606]
gi|322508358|gb|ADX03812.1| recR [Acinetobacter baumannii 1656-2]
gi|323517980|gb|ADX92361.1| recombination protein RecR [Acinetobacter baumannii TCDC-AB0715]
gi|332729697|gb|EGJ61032.1| recombination protein RecR [Acinetobacter baumannii 6013150]
gi|332734985|gb|EGJ66071.1| recombination protein RecR [Acinetobacter baumannii 6013113]
gi|332737343|gb|EGJ68267.1| recombination protein RecR [Acinetobacter baumannii 6014059]
Length = 198
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C
Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTEHEICDICASTERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI LI+R+ I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+
Sbjct: 121 IGIPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|282880427|ref|ZP_06289135.1| recombination protein RecR [Prevotella timonensis CRIS 5C-B1]
gi|281305698|gb|EFA97750.1| recombination protein RecR [Prevotella timonensis CRIS 5C-B1]
Length = 203
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 128/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + A++PG G ++A R L+++++ + + A+A++ + + V C
Sbjct: 1 MEQQYPSLLLEKAVSEFAKLPGIGRKTALRLVLNMLRRNVEEVEQFAQAISTMRHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ TD C IC D +RDAS I VVE++ D+ A+E + LYHVLGG +SP+D I
Sbjct: 61 RQCHNISDTDICPICADPRRDASTICVVENIQDVMAIENTMQYRGLYHVLGGLISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+ + IQSLI+R+E I E+I A+++T+EG TT YI KL +VK+T +A GIP+G
Sbjct: 121 GPDQLEIQSLIDRVEAGGISEVILALNSTMEGDTTNFYISRKLNSSEVKLTVIARGIPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +R
Sbjct: 181 DELEYTDEVTLGRSILNRIPF 201
>gi|113868362|ref|YP_726851.1| recombinational DNA repair protein (RecF pathway) [Ralstonia
eutropha H16]
gi|113527138|emb|CAJ93483.1| Recombinational DNA repair protein (RecF pathway) [Ralstonia
eutropha H16]
Length = 318
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 113/203 (55%), Gaps = 4/203 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K + ++ L++ L +PG GP+SA+R HL++ + L +A+ + + C
Sbjct: 116 KASSPTSLQALVEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCQR 175
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP
Sbjct: 176 CNTFTEQEICETCLDDRRDASVLCVVETPADQVMIEQTLTYRGKYFVLMGRLSPLDGIGP 235
Query: 123 EDIGIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
+I + L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P
Sbjct: 236 REIHLDRLLARATEPELGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVP 295
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G EL+Y+D GTI A+ R L
Sbjct: 296 VGGELEYVDAGTIARAVMDRRNL 318
>gi|227888767|ref|ZP_04006572.1| recombination protein RecR [Lactobacillus johnsonii ATCC 33200]
gi|227850604|gb|EEJ60690.1| recombination protein RecR [Lactobacillus johnsonii ATCC 33200]
Length = 199
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + EQ + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLIQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC DQ RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDQNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +I+E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEIKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|282859499|ref|ZP_06268604.1| recombination protein RecR [Prevotella bivia JCVIHMP010]
gi|282587727|gb|EFB92927.1| recombination protein RecR [Prevotella bivia JCVIHMP010]
Length = 202
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 128/199 (64%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ +E + +++PG G ++A R LHL+++ + + AM + + + C +
Sbjct: 2 QQYPSLLLEKAVNEFSQLPGIGRKTALRLVLHLLRQSTTQVDDFSNAMVEMKHNIKHCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ TD C IC D +RD +V+ VVE++ D+ A+E ++ N LYHVLGG +SP+D IGP
Sbjct: 62 CHNISDTDICPICSDARRDTTVVCVVENIQDVMAIENTQQFNGLYHVLGGIISPMDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I+SL+ER+ +I+E+I A+++T+EG TT YI KLK DVK++ +A GI +G E
Sbjct: 122 NDLEIESLVERVRSGEIKEIILALASTMEGDTTNFYISRKLKEFDVKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSIINRTPF 200
>gi|325694086|gb|EGD36004.1| recombination protein R [Streptococcus sanguinis SK150]
Length = 198
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|258650921|ref|YP_003200077.1| recombination protein RecR [Nakamurella multipartita DSM 44233]
gi|258554146|gb|ACV77088.1| recombination protein RecR [Nakamurella multipartita DSM 44233]
Length = 202
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + L A+ + ++V C++CG
Sbjct: 3 VYEGPVQDLIDELGRLPGIGPKSAQRIAFHLLTADPVDITRLQSALQRVKDEVRFCTVCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D R+ +VI VVE+ D+ A+ER++ YHVLGG++SP+D IGP+
Sbjct: 63 NVAADEKCRICADPAREDAVICVVEEPKDVAAVERTREFRGKYHVLGGAISPIDGIGPDQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ I L+ RI +RE+I A +EG+ TA Y+ L+ + +TRLA G+P+G +L
Sbjct: 123 LRIAPLLTRIAAPGVREVILATDPNLEGEATATYLTRLLQPFPGLTVTRLASGLPVGGDL 182
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y D+ T+ A R
Sbjct: 183 EYADEVTLGRAFAGRRS 199
>gi|331681867|ref|ZP_08382500.1| recombination protein RecR [Escherichia coli H299]
gi|331081069|gb|EGI52234.1| recombination protein RecR [Escherichia coli H299]
Length = 201
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEHEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|16759465|ref|NP_455082.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16763866|ref|NP_459481.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142763|ref|NP_806105.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414359|ref|YP_151434.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615316|ref|YP_001589281.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550987|ref|ZP_02344743.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990473|ref|ZP_02571573.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231477|ref|ZP_02656535.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237603|ref|ZP_02662661.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240317|ref|ZP_02665249.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261075|ref|ZP_02683048.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465583|ref|ZP_02699465.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168818897|ref|ZP_02830897.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444330|ref|YP_002039729.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448771|ref|YP_002044519.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194470304|ref|ZP_03076288.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735608|ref|YP_002113517.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248347|ref|YP_002145469.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263068|ref|ZP_03163142.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363279|ref|YP_002142916.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243466|ref|YP_002214439.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200391025|ref|ZP_03217636.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204930603|ref|ZP_03221533.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351794|ref|YP_002225595.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855965|ref|YP_002242616.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213022745|ref|ZP_03337192.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213163419|ref|ZP_03349129.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427145|ref|ZP_03359895.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213579999|ref|ZP_03361825.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213615956|ref|ZP_03371782.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213650776|ref|ZP_03380829.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865426|ref|ZP_03387545.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582323|ref|YP_002636121.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911384|ref|ZP_04655221.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289811209|ref|ZP_06541838.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289828677|ref|ZP_06546476.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|54039040|sp|P65993|RECR_SALTI RecName: Full=Recombination protein recR
gi|54041799|sp|P65992|RECR_SALTY RecName: Full=Recombination protein recR
gi|73621514|sp|Q5PFK6|RECR_SALPA RecName: Full=Recombination protein recR
gi|189029372|sp|A9MW89|RECR_SALPB RecName: Full=Recombination protein recR
gi|226726307|sp|B5EXM8|RECR_SALA4 RecName: Full=Recombination protein recR
gi|226726308|sp|B5FLJ4|RECR_SALDC RecName: Full=Recombination protein recR
gi|226726309|sp|B5QU75|RECR_SALEP RecName: Full=Recombination protein recR
gi|226726310|sp|B5R610|RECR_SALG2 RecName: Full=Recombination protein recR
gi|229485576|sp|B4T9H9|RECR_SALHS RecName: Full=Recombination protein recR
gi|229485577|sp|B4SWX9|RECR_SALNS RecName: Full=Recombination protein recR
gi|229485578|sp|B5BD46|RECR_SALPK RecName: Full=Recombination protein recR
gi|229485579|sp|B4TMG4|RECR_SALSV RecName: Full=Recombination protein recR
gi|254790781|sp|C0Q810|RECR_SALPC RecName: Full=Recombination protein recR
gi|25300540|pir||AI0562 recombination protein RecR [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16418994|gb|AAL19440.1| putative recombination protein, gap repair [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16501757|emb|CAD04971.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138395|gb|AAO69965.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128616|gb|AAV78122.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364680|gb|ABX68448.1| hypothetical protein SPAB_03086 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402993|gb|ACF63215.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194407075|gb|ACF67294.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456668|gb|EDX45507.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711110|gb|ACF90331.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631916|gb|EDX50436.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094756|emb|CAR60289.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212050|gb|ACH49447.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241323|gb|EDY23943.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289528|gb|EDY28891.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937982|gb|ACH75315.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199603470|gb|EDZ02016.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320537|gb|EDZ05740.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271575|emb|CAR36395.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324246|gb|EDZ12085.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330831|gb|EDZ17595.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205334145|gb|EDZ20909.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339737|gb|EDZ26501.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344002|gb|EDZ30766.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350079|gb|EDZ36710.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707768|emb|CAR32053.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466850|gb|ACN44680.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245768|emb|CBG23565.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992203|gb|ACY87088.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157095|emb|CBW16579.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911518|dbj|BAJ35492.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084761|emb|CBY94551.1| Recombination protein recR [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226064|gb|EFX51115.1| Recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614762|gb|EFY11691.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618869|gb|EFY15757.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623576|gb|EFY20415.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629125|gb|EFY25904.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631846|gb|EFY28600.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637417|gb|EFY34119.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642102|gb|EFY38712.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645874|gb|EFY42395.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322652336|gb|EFY48691.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653239|gb|EFY49572.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660612|gb|EFY56848.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664764|gb|EFY60957.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669183|gb|EFY65333.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670728|gb|EFY66861.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679033|gb|EFY75088.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682062|gb|EFY78087.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685109|gb|EFY81106.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323128805|gb|ADX16235.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192997|gb|EFZ78220.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196921|gb|EFZ82063.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203906|gb|EFZ88923.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207009|gb|EFZ91962.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323214212|gb|EFZ98970.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214464|gb|EFZ99215.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219193|gb|EGA03690.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226970|gb|EGA11151.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230212|gb|EGA14332.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233950|gb|EGA18039.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238356|gb|EGA22414.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244043|gb|EGA28052.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246631|gb|EGA30605.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251830|gb|EGA35693.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257826|gb|EGA41505.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261160|gb|EGA44752.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264910|gb|EGA48409.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272473|gb|EGA55880.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622186|gb|EGE28531.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626830|gb|EGE33173.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987435|gb|AEF06418.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 201
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|293373050|ref|ZP_06619419.1| recombination protein RecR [Bacteroides ovatus SD CMC 3f]
gi|292632118|gb|EFF50727.1| recombination protein RecR [Bacteroides ovatus SD CMC 3f]
Length = 205
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDVSTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ ++E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVAEGGVKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|257468026|ref|ZP_05632122.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185]
gi|317062312|ref|ZP_07926797.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185]
gi|313687988|gb|EFS24823.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185]
Length = 197
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H+++ E+ + +EAM + + C +CG
Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSATRLAFHILEMSEEQVEKFSEAMKEVKKTIKKCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C IC D+ RD ++ VVED D+ + E++ N YHVL G ++PL+ + P+
Sbjct: 61 DFCENDLCNICADETRDKEIVCVVEDSRDIISFEKTGKYNGTYHVLNGKIAPLNGMTPDK 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ER+ I E+I A++ +EG+TT+ Y+ LK VKIT++A GIP+G ++
Sbjct: 121 LNIKSLLERVAATDINEVILALNPDLEGETTSLYLTKLLKPFGVKITKIASGIPIGGNIE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D TI +A+ R
Sbjct: 181 FADTATISKALDGRHE 196
>gi|303231327|ref|ZP_07318062.1| recombination protein RecR [Veillonella atypica ACS-049-V-Sch6]
gi|302514007|gb|EFL56014.1| recombination protein RecR [Veillonella atypica ACS-049-V-Sch6]
Length = 198
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 114/194 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L++ L R+PG G +SARR HLV+ ++ + L + CSIC N+
Sbjct: 3 NALERLVEQLRRLPGIGSKSARRLAYHLVEMPQEEVDRLVNTVVEAKGATRHCSICFNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSPL+ IG EDI +
Sbjct: 63 AQDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPLEGIGAEDIRV 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D
Sbjct: 123 KELIARLRDGVVQEVILATDPDVEGEATALYLARLLAPTGIKVTRIARGVPVGGDIEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ +R +
Sbjct: 183 ELTLGGAVVNRQEM 196
>gi|253583496|ref|ZP_04860694.1| recombination protein recR [Fusobacterium varium ATCC 27725]
gi|251834068|gb|EES62631.1| recombination protein recR [Fusobacterium varium ATCC 27725]
Length = 197
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H+++ E+ + +EAM + + C +CG
Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSATRLAFHILEMSEEQVEKFSEAMKEVKKTIKKCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C IC D+ RD ++ VVED D+ + E++ N YHVL G ++PL+ + P+
Sbjct: 61 DFCENDLCNICADETRDKEIVCVVEDSRDIISFEKTGKYNGTYHVLNGKIAPLNGMTPDK 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ER+ I E+I A++ +EG+TT+ Y+ LK VKIT++A GIP+G ++
Sbjct: 121 LNIKSLLERVAATDISEVILALNPDLEGETTSLYLTKLLKPFGVKITKIASGIPIGGNIE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D TI +A+ R
Sbjct: 181 FADTATISKALDGRHE 196
>gi|288918921|ref|ZP_06413264.1| recombination protein RecR [Frankia sp. EUN1f]
gi|288349673|gb|EFC83907.1| recombination protein RecR [Frankia sp. EUN1f]
Length = 199
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 115/195 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++++I L ++PG GP+SA+R HL+ + L A+ + KV C C
Sbjct: 1 MYEGVVQDVIDELGQLPGIGPKSAQRIAFHLLAADPADVRRLVSALTELKEKVQFCRTCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV ++ C IC+D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D
Sbjct: 61 NVAQSELCRICVDPRRDQTSICVVEESKDVVAIERTREFRGRYHVLGGAINPIGGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ LI R+ + E+I A EG+ TA Y+ ++ + + +TRLA G+PMG +L+
Sbjct: 121 LHIRELIARLADGVVTEIILATDPNTEGEVTASYLARQIAPMGLTVTRLASGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRT 199
+ D+ T+ A R
Sbjct: 181 WADEVTLGRAFEGRR 195
>gi|194432682|ref|ZP_03064967.1| recombination protein RecR [Shigella dysenteriae 1012]
gi|194418944|gb|EDX35028.1| recombination protein RecR [Shigella dysenteriae 1012]
gi|332097006|gb|EGJ01990.1| recombination protein RecR [Shigella dysenteriae 155-74]
Length = 201
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ + + C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSAIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|16272391|ref|NP_438604.1| recombination protein RecR [Haemophilus influenzae Rd KW20]
gi|68249043|ref|YP_248155.1| recombination protein RecR [Haemophilus influenzae 86-028NP]
gi|145636288|ref|ZP_01791957.1| recombination protein RecR [Haemophilus influenzae PittHH]
gi|145638647|ref|ZP_01794256.1| recombination protein RecR [Haemophilus influenzae PittII]
gi|145640410|ref|ZP_01795994.1| recombination protein RecR [Haemophilus influenzae R3021]
gi|148825277|ref|YP_001290030.1| recombination protein RecR [Haemophilus influenzae PittEE]
gi|148827639|ref|YP_001292392.1| recombination protein RecR [Haemophilus influenzae PittGG]
gi|229846529|ref|ZP_04466637.1| recombination protein RecR [Haemophilus influenzae 7P49H1]
gi|260580494|ref|ZP_05848322.1| recombination protein RecR [Haemophilus influenzae RdAW]
gi|260582291|ref|ZP_05850084.1| recombination protein RecR [Haemophilus influenzae NT127]
gi|319775630|ref|YP_004138118.1| recombination protein RecR [Haemophilus influenzae F3047]
gi|319898036|ref|YP_004136233.1| recombination protein recr [Haemophilus influenzae F3031]
gi|329122321|ref|ZP_08250909.1| recombination protein R [Haemophilus aegyptius ATCC 11116]
gi|1172899|sp|P44712|RECR_HAEIN RecName: Full=Recombination protein recR
gi|73621490|sp|Q4QNA2|RECR_HAEI8 RecName: Full=Recombination protein recR
gi|166221943|sp|A5UA46|RECR_HAEIE RecName: Full=Recombination protein recR
gi|166221944|sp|A5UGV3|RECR_HAEIG RecName: Full=Recombination protein recR
gi|1573419|gb|AAC22102.1| recombination protein (recR) [Haemophilus influenzae Rd KW20]
gi|68057242|gb|AAX87495.1| recombination protein RecR [Haemophilus influenzae 86-028NP]
gi|145270453|gb|EDK10387.1| recombination protein RecR [Haemophilus influenzae PittHH]
gi|145272242|gb|EDK12150.1| recombination protein RecR [Haemophilus influenzae PittII]
gi|145274996|gb|EDK14858.1| recombination protein RecR [Haemophilus influenzae 22.4-21]
gi|148715437|gb|ABQ97647.1| recombination protein RecR [Haemophilus influenzae PittEE]
gi|148718881|gb|ABR00009.1| recombination protein RecR [Haemophilus influenzae PittGG]
gi|229810622|gb|EEP46340.1| recombination protein RecR [Haemophilus influenzae 7P49H1]
gi|260092836|gb|EEW76771.1| recombination protein RecR [Haemophilus influenzae RdAW]
gi|260094659|gb|EEW78554.1| recombination protein RecR [Haemophilus influenzae NT127]
gi|301169143|emb|CBW28740.1| gap repair protein [Haemophilus influenzae 10810]
gi|309750141|gb|ADO80125.1| Recombination protein RecR [Haemophilus influenzae R2866]
gi|309972400|gb|ADO95601.1| Recombination protein RecR [Haemophilus influenzae R2846]
gi|317433542|emb|CBY81926.1| recombination protein RecR [Haemophilus influenzae F3031]
gi|317450221|emb|CBY86437.1| recombination protein RecR [Haemophilus influenzae F3047]
gi|327473882|gb|EGF19299.1| recombination protein R [Haemophilus aegyptius ATCC 11116]
Length = 200
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRQI 199
>gi|283834202|ref|ZP_06353943.1| recombination protein RecR [Citrobacter youngae ATCC 29220]
gi|291070355|gb|EFE08464.1| recombination protein RecR [Citrobacter youngae ATCC 29220]
Length = 201
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ ++I ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLASEQINELILATNPTVEGEATANYIAELCMQYGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|332362738|gb|EGJ40534.1| recombination protein R [Streptococcus sanguinis SK49]
Length = 198
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSQDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|260102439|ref|ZP_05752676.1| recombination protein R [Lactobacillus helveticus DSM 20075]
gi|260083759|gb|EEW67879.1| recombination protein R [Lactobacillus helveticus DSM 20075]
Length = 199
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI R+PG G ++A R + + E+ + ++A+ + N + C ICGN
Sbjct: 3 YPLPIAHLIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE I
Sbjct: 63 ITEKEVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEKI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ ++E+I A+++T EG++TA YI +K ++K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAEIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTAL 199
>gi|58336716|ref|YP_193301.1| recombination protein RecR [Lactobacillus acidophilus NCFM]
gi|227903278|ref|ZP_04021083.1| recombinational DNA repair protein [Lactobacillus acidophilus ATCC
4796]
gi|73621492|sp|Q5FM04|RECR_LACAC RecName: Full=Recombination protein recR
gi|58254033|gb|AAV42270.1| recombinational DNA repair protein [Lactobacillus acidophilus NCFM]
gi|227868907|gb|EEJ76328.1| recombinational DNA repair protein [Lactobacillus acidophilus ATCC
4796]
Length = 199
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI ++PG G ++A R + + ++ + ++A+ + + C ICGN
Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFSKALIQVKQDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC + RD + I+VVE DL ALE + LYHVL G LSP+D IGPE++
Sbjct: 63 ITEKEICDICSNPNRDQTTIMVVEQPKDLMALEEMGEYDGLYHVLHGVLSPMDGIGPEEV 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ ++E+I A+++T EG++T+ YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKNDDVKEVILALNSTPEGESTSMYISKLIKPAGIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTTL 199
>gi|242238467|ref|YP_002986648.1| recombination protein RecR [Dickeya dadantii Ech703]
gi|242130524|gb|ACS84826.1| recombination protein RecR [Dickeya dadantii Ech703]
Length = 201
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L+ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMDALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEARLATESISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|209886653|ref|YP_002290510.1| recombination protein RecR [Oligotropha carboxidovorans OM5]
gi|259563701|sp|B6JJQ1|RECR_OLICO RecName: Full=Recombination protein recR
gi|209874849|gb|ACI94645.1| recombination protein RecR [Oligotropha carboxidovorans OM5]
Length = 201
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 153/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MASTVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC IC D +RD ++I+VV DV+DLWALER+ A YHVLG +LSPLD I
Sbjct: 61 HTCGNIDTQNPCTICSDPRRDPAIIVVVADVSDLWALERAHATQGRYHVLGATLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R +V ++ E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVTRAQVPEVTEIILALNATVDGQTTAHYVTDMLQDANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|329117044|ref|ZP_08245761.1| recombination protein RecR [Streptococcus parauberis NCFD 2020]
gi|326907449|gb|EGE54363.1| recombination protein RecR [Streptococcus parauberis NCFD 2020]
Length = 198
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D R+ +I+VVE+ D+ A+E+ + + LYHVL G +SP++ +GP++
Sbjct: 62 NLTDDDPCGICTDPNRNQEIILVVEESKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDN 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKPLITRLMDGKVNEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|189346405|ref|YP_001942934.1| recombination protein RecR [Chlorobium limicola DSM 245]
gi|229890137|sp|B3EIC5|RECR_CHLL2 RecName: Full=Recombination protein recR
gi|189340552|gb|ACD89955.1| recombination protein RecR [Chlorobium limicola DSM 245]
Length = 205
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 6/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI+ A++PG G ++A+R +H++ + + LA A+ +I KV CS+C
Sbjct: 2 RYTSAAIETLIEEFAKLPGIGRKTAQRLAMHILHEPKSGAERLAGALIDIKEKVIRCSVC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC IC RD SVI VVE AD+ A E++ YHVL G +SPLD IG
Sbjct: 62 QNVTDRDADPCYICSSTGRDRSVICVVESPADVLAFEKTGHYKGQYHVLHGLVSPLDGIG 121
Query: 122 PEDIGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
P+DI I L+ ER E ++E++ A++ T+EG+TT+ YI LK + +T++A GI
Sbjct: 122 PDDIRIHELLARLGERHEAVPVKEVVLALNPTVEGETTSLYITRLLKPFGISVTKIARGI 181
Query: 178 PMGSELDYLDDGTIFEAIRSRTV 200
P+G+EL+++D+ T+ A+ R+
Sbjct: 182 PVGAELEFIDEATLSRAMEGRSA 204
>gi|293608165|ref|ZP_06690468.1| recombination protein recR [Acinetobacter sp. SH024]
gi|292828738|gb|EFF87100.1| recombination protein recR [Acinetobacter sp. SH024]
gi|325122105|gb|ADY81628.1| recombination protein, gap repair [Acinetobacter calcoaceticus
PHEA-2]
Length = 198
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C
Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTEHEICDICASTDRDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI LI+R+ I E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+
Sbjct: 121 IGIPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|157151011|ref|YP_001450727.1| recombination protein RecR [Streptococcus gordonii str. Challis
substr. CH1]
gi|189029380|sp|A8AY67|RECR_STRGC RecName: Full=Recombination protein recR
gi|157075805|gb|ABV10488.1| recombination protein RecR [Streptococcus gordonii str. Challis
substr. CH1]
Length = 198
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D+ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICRDESRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|317492875|ref|ZP_07951299.1| recombination protein RecR [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918997|gb|EFV40332.1| recombination protein RecR [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 201
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R H++++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHMLQRDRSGGMRLAQALTRAMSEIGHCEDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDICTICSNSRRKENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + + E+I A + T+EG+ TA+YI + V TR+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLGQEPLTEVILATNPTVEGEATANYIAEMCSAHGVLATRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTV 200
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRNP 198
>gi|163801916|ref|ZP_02195813.1| recombination protein RecR [Vibrio sp. AND4]
gi|159174424|gb|EDP59228.1| recombination protein RecR [Vibrio sp. AND4]
Length = 199
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R D I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQDNGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRHKI 199
>gi|150005488|ref|YP_001300232.1| recombination protein RecR [Bacteroides vulgatus ATCC 8482]
gi|237710673|ref|ZP_04541154.1| recombination protein recR [Bacteroides sp. 9_1_42FAA]
gi|237727063|ref|ZP_04557544.1| recombination protein recR [Bacteroides sp. D4]
gi|265750346|ref|ZP_06086409.1| recombination protein RecR [Bacteroides sp. 3_1_33FAA]
gi|294778690|ref|ZP_06744109.1| recombination protein RecR [Bacteroides vulgatus PC510]
gi|319640712|ref|ZP_07995426.1| recombination protein recR [Bacteroides sp. 3_1_40A]
gi|166221923|sp|A6L4J6|RECR_BACV8 RecName: Full=Recombination protein recR
gi|149933912|gb|ABR40610.1| recombination protein recR [Bacteroides vulgatus ATCC 8482]
gi|229433919|gb|EEO43996.1| recombination protein recR [Bacteroides dorei 5_1_36/D4]
gi|229455395|gb|EEO61116.1| recombination protein recR [Bacteroides sp. 9_1_42FAA]
gi|263237242|gb|EEZ22692.1| recombination protein RecR [Bacteroides sp. 3_1_33FAA]
gi|294447346|gb|EFG15927.1| recombination protein RecR [Bacteroides vulgatus PC510]
gi|317387674|gb|EFV68539.1| recombination protein recR [Bacteroides sp. 3_1_40A]
Length = 205
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 130/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ ++ AM + ++V C
Sbjct: 1 MNQQYPSMLLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G
Sbjct: 121 GPSDLQIESLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYTDEVTLGRSIINRTLF 201
>gi|94969000|ref|YP_591048.1| recombination protein RecR [Candidatus Koribacter versatilis
Ellin345]
gi|166221918|sp|Q1IQ76|RECR_ACIBL RecName: Full=Recombination protein recR
gi|94551050|gb|ABF40974.1| DNA replication and repair protein RecR [Candidatus Koribacter
versatilis Ellin345]
Length = 199
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + + LI L ++PG G +SA+R H+++ LA+A+ ++ K+ LC
Sbjct: 1 MSK--FAEPMARLIDELKKLPGVGNKSAQRLAFHILRSSNDDAELLADAVRDVKAKLRLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SIC N+ DPC C + R+ VI VVE+ ++ A+E+++ N +YHVL G+LSPL +
Sbjct: 59 SICNNITDVDPCTYCANPTRNQQVICVVEEPTNISAVEKTRHFNGVYHVLHGALSPLHGV 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I +LI+R+E K E+I A + T+EG+ TA Y+ LK V++TR+A G+P+G
Sbjct: 119 GPEHLRISNLIKRVEGGKAEEVILATNPTVEGEATATYLSKILKAEGVRVTRIATGVPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S+++Y D+ T+ +A+ R L
Sbjct: 179 SDIEYADEVTMQKAMEGRREL 199
>gi|145634560|ref|ZP_01790269.1| recombination protein RecR [Haemophilus influenzae PittAA]
gi|145268105|gb|EDK08100.1| recombination protein RecR [Haemophilus influenzae PittAA]
Length = 200
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+LI+ L +PG GP+SA+R HL++ LA A+ +K+ CS C +
Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQHNRSGGMNLARALTEAMSKIGHCSQCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQQNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRQI 199
>gi|189459398|ref|ZP_03008183.1| hypothetical protein BACCOP_00019 [Bacteroides coprocola DSM 17136]
gi|189433855|gb|EDV02840.1| hypothetical protein BACCOP_00019 [Bacteroides coprocola DSM 17136]
Length = 222
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ Q + A+ + +V C
Sbjct: 18 MSQQYPSVLLEKAVGEFAKLPGIGRKTAMRLVLHLLRQDLQTVEAFGNAVITLKREVKYC 77
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 78 RVCHNISDTDVCQICSNSSRDASTVCVVENIRDVMAVENTQQYKGLYHVLGGVISPMDGV 137
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ +RE+I A+S+T+EG TT YI KL DVK+T +A GI +G
Sbjct: 138 GPSDLQIESLVERVKSGTVREVILALSSTMEGDTTNFYIFRKLAPYDVKLTMIARGISIG 197
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RTV
Sbjct: 198 DELEYTDEVTLGRSIVNRTVF 218
>gi|300811156|ref|ZP_07091668.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497860|gb|EFK32870.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 199
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN
Sbjct: 3 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I
Sbjct: 63 ITEQDPCAICSNPTRDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANLITLKRAVQGRTEL 199
>gi|125717544|ref|YP_001034677.1| recombination protein RecR [Streptococcus sanguinis SK36]
gi|166223508|sp|A3CLS2|RECR_STRSV RecName: Full=Recombination protein recR
gi|125497461|gb|ABN44127.1| Recombinational DNA repair protein (RecF pathway), putative
[Streptococcus sanguinis SK36]
gi|324990633|gb|EGC22569.1| recombination protein R [Streptococcus sanguinis SK353]
gi|325688254|gb|EGD30273.1| recombination protein R [Streptococcus sanguinis SK72]
gi|327458731|gb|EGF05079.1| recombination protein R [Streptococcus sanguinis SK1057]
gi|327461648|gb|EGF07979.1| recombination protein R [Streptococcus sanguinis SK1]
gi|328945545|gb|EGG39696.1| recombination protein R [Streptococcus sanguinis SK1087]
gi|332363452|gb|EGJ41235.1| recombination protein R [Streptococcus sanguinis SK355]
gi|332366051|gb|EGJ43807.1| recombination protein R [Streptococcus sanguinis SK1059]
Length = 198
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|108758594|ref|YP_630174.1| recombination protein RecR [Myxococcus xanthus DK 1622]
gi|123247980|sp|Q1DAZ9|RECR_MYXXD RecName: Full=Recombination protein recR
gi|108462474|gb|ABF87659.1| recombination protein RecR [Myxococcus xanthus DK 1622]
Length = 197
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+T + L+ LA++PG G ++A+R H+++ + L++A+ + KV LC C
Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRAPGEYAAELSQAIREVKEKVHLCVRCF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C C D +RD V+ VVE ADL ALER++ YHVL G LSPL+ +GP+
Sbjct: 61 SLTDAETCNFCRDARRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ER+ ++ ELI A + +EG+ TA Y+ LK + +++TR+A G+PMG +L+
Sbjct: 121 LRIRELLERLNDSRVEELILATNPDVEGEATALYLTRLLKPMGLRVTRIAQGLPMGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D T+ +A+ +R L
Sbjct: 181 FADQATLAKALSARRDL 197
>gi|323191138|gb|EFZ76402.1| recombination protein RecR [Escherichia coli RN587/1]
Length = 201
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 ASPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|157146901|ref|YP_001454220.1| recombination protein RecR [Citrobacter koseri ATCC BAA-895]
gi|166221931|sp|A8AJX1|RECR_CITK8 RecName: Full=Recombination protein recR
gi|157084106|gb|ABV13784.1| hypothetical protein CKO_02677 [Citrobacter koseri ATCC BAA-895]
Length = 201
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +++ E+I A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLASEQLSEVILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|323352704|ref|ZP_08087674.1| recombination protein R [Streptococcus sanguinis VMC66]
gi|322121740|gb|EFX93486.1| recombination protein R [Streptococcus sanguinis VMC66]
Length = 198
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I NLI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIANLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|319938751|ref|ZP_08013115.1| recombination protein recR [Streptococcus anginosus 1_2_62CV]
gi|319811801|gb|EFW08067.1| recombination protein recR [Streptococcus anginosus 1_2_62CV]
Length = 198
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ +PCAIC D+ RD S I+VVED D+ A+E + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDDNPCAICTDETRDQSTILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|62179097|ref|YP_215514.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|73621513|sp|Q57S78|RECR_SALCH RecName: Full=Recombination protein recR
gi|62126730|gb|AAX64433.1| putative recombination protein, gap repair [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322713558|gb|EFZ05129.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 201
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFPGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|254884038|ref|ZP_05256748.1| recombination protein recR [Bacteroides sp. 4_3_47FAA]
gi|254836831|gb|EET17140.1| recombination protein recR [Bacteroides sp. 4_3_47FAA]
Length = 206
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 130/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ ++ AM + ++V C
Sbjct: 2 MNQQYPSMLLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYC 61
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 62 KVCHNISDTETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGI 121
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G
Sbjct: 122 GPSDLQIESLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIG 181
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 182 DELEYTDEVTLGRSIINRTLF 202
>gi|253990860|ref|YP_003042216.1| recombination protein RecR [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211639195|emb|CAR67808.1| Recombination protein recR [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782310|emb|CAQ85474.1| Recombination protein recR [Photorhabdus asymbiotica]
Length = 201
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTKAMSEIGHCQYCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEQCTICANSRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA+YI D +V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSTEVISEVILATNPTVEGEATANYIADMCAQYEVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRQKI 199
>gi|329944061|ref|ZP_08292327.1| recombination protein RecR [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531107|gb|EGF57958.1| recombination protein RecR [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 202
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +PG GP+SA+R H++ + L EA+ + KV C CG
Sbjct: 4 VYEGAVQDLIDEFGELPGIGPKSAQRMAFHVLAADSAAVERLIEALRAVKAKVRFCETCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D
Sbjct: 64 NIAEAPQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G++L+
Sbjct: 124 LRVRELFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVGADLE 183
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 184 YADEVTLGRAFEGRRR 199
>gi|251790617|ref|YP_003005338.1| recombination protein RecR [Dickeya zeae Ech1591]
gi|247539238|gb|ACT07859.1| recombination protein RecR [Dickeya zeae Ech1591]
Length = 201
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L+ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMDALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEVCSICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLVTETISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|302390829|ref|YP_003826649.1| DNA replication and repair protein RecR [Acetohalobium arabaticum
DSM 5501]
gi|302202906|gb|ADL11584.1| DNA replication and repair protein RecR [Acetohalobium arabaticum
DSM 5501]
Length = 201
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 70/199 (35%), Positives = 124/199 (62%), Gaps = 2/199 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K K I LI L ++PG GP+SA+R +++ ++ + L +A+ ++ +++ C +C
Sbjct: 2 KYYAKPIAKLIGKLTKLPGIGPKSAQRLAFYIMNDSDEEVEELVDAIKDVKDRIDYCEVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + +R+ SVI +VE D+ A+E++ N LYHVL GS+SP++ +GP+
Sbjct: 62 NNLTEHERCNICSNDERNRSVICIVESPKDIIAMEKTGEYNGLYHVLHGSISPMEGVGPD 121
Query: 124 DIGIQSLIER--IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
DI I+ L+ R E +++ E+I A +EG+ TA YI LK + + +R+A+G+P+G
Sbjct: 122 DIEIKGLLSRIEDEDEEVEEVILATDPNVEGEATAMYIARLLKPLGITASRIAHGLPVGG 181
Query: 182 ELDYLDDGTIFEAIRSRTV 200
+L+Y D+ T+ +A+ R
Sbjct: 182 DLEYADEVTLSKALEGRKQ 200
>gi|292487504|ref|YP_003530376.1| recombination protein recR [Erwinia amylovora CFBP1430]
gi|292898745|ref|YP_003538114.1| recombination protein [Erwinia amylovora ATCC 49946]
gi|291198593|emb|CBJ45701.1| recombination protein [Erwinia amylovora ATCC 49946]
gi|291552923|emb|CBA19968.1| Recombination protein recR [Erwinia amylovora CFBP1430]
gi|312171609|emb|CBX79867.1| Recombination protein recR [Erwinia amylovora ATCC BAA-2158]
Length = 201
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R +I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDICTICANPRRRQNGLICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEKESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLVGRQKF 199
>gi|225870068|ref|YP_002746015.1| recombination protein RecR [Streptococcus equi subsp. equi 4047]
gi|254790784|sp|C0M8S3|RECR_STRE4 RecName: Full=Recombination protein recR
gi|225699472|emb|CAW92992.1| recombination protein RecR [Streptococcus equi subsp. equi 4047]
Length = 198
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG
Sbjct: 2 LYPIPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD +I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCHICTDSSRDKEIILVVEDSKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ + E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMAGEATEVIVATNATADGEATAMYISRLLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|183600057|ref|ZP_02961550.1| hypothetical protein PROSTU_03589 [Providencia stuartii ATCC 25827]
gi|188022342|gb|EDU60382.1| hypothetical protein PROSTU_03589 [Providencia stuartii ATCC 25827]
Length = 199
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP D
Sbjct: 63 FTEQEVCNICENPRRQQNGLICVVESPADIYAVEQTGQFSGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSSETIIEVILATNPTVEGEATANYIAQMCAQYGVAASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 MVDGTTLSHSLAGRQRL 199
>gi|146310613|ref|YP_001175687.1| recombination protein RecR [Enterobacter sp. 638]
gi|166918740|sp|A4W7F6|RECR_ENT38 RecName: Full=Recombination protein recR
gi|145317489|gb|ABP59636.1| DNA replication and repair protein RecR [Enterobacter sp. 638]
Length = 201
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESETLTEVILATNPTVEGEATANYIGELCAQYGVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 MVDGTTLSHSLAGRHKL 199
>gi|294794413|ref|ZP_06759549.1| recombination protein RecR [Veillonella sp. 3_1_44]
gi|294454743|gb|EFG23116.1| recombination protein RecR [Veillonella sp. 3_1_44]
Length = 198
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 115/194 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+
Sbjct: 3 NALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI +
Sbjct: 63 AQDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRV 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+ ++E+I A IEG+ TA Y+ L +K+TR+A G+P+G +++Y D
Sbjct: 123 KELIARLRDGVVQEVILATDPDIEGEATALYLARLLTPSGIKVTRIARGVPVGGDIEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ +R +
Sbjct: 183 ELTLGGAVVNRQEM 196
>gi|161506950|ref|YP_001576904.1| recombination protein RecR [Lactobacillus helveticus DPC 4571]
gi|172048178|sp|A8YTF7|RECR_LACH4 RecName: Full=Recombination protein recR
gi|160347939|gb|ABX26613.1| Recombinational DNA repair protein [Lactobacillus helveticus DPC
4571]
gi|328462875|gb|EGF34724.1| recombination protein RecR [Lactobacillus helveticus MTCC 5463]
Length = 199
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I +LI R+PG G ++A R + + E+ + ++A+ + N + C ICGN
Sbjct: 3 YPLPIAHLIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I
Sbjct: 63 ITEKEVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ ++E+I A+++T EG++TA YI +K ++K+TRLA G+ +GS+++
Sbjct: 123 NIKSLITRLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAEIKVTRLAAGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTAL 199
>gi|85712671|ref|ZP_01043717.1| Recombinational DNA repair protein [Idiomarina baltica OS145]
gi|85693521|gb|EAQ31473.1| Recombinational DNA repair protein [Idiomarina baltica OS145]
Length = 202
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 113/202 (55%), Gaps = 2/202 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + I I+ L+ L R+PG G ++A+R HL+++ + LA+++ N +V C
Sbjct: 1 MSEGI-SPAIDRLVDDLKRLPGVGKKTAQRMAFHLLERDREGAQRLADSLHNAVERVGHC 59
Query: 61 SICGNVDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C + C IC + R + + VVE AD+ A+E++ Y VL G LSPLD
Sbjct: 60 QQCRTLTEEPLCRICANPARSEQGTLCVVETPADVLAIEQTSQFKGRYFVLMGHLSPLDG 119
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGPEDIG+ L +++ I E+I A + T+EG TAHYI D + ++V +R+A+G+P+
Sbjct: 120 IGPEDIGLDELEAQLKSAVIEEIILATNPTVEGDATAHYIADIAESLNVNTSRIAHGVPV 179
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G EL Y+D T+ A R
Sbjct: 180 GGELGYVDQATLGHAFTGRKKF 201
>gi|320531495|ref|ZP_08032451.1| recombination protein RecR [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320136292|gb|EFW28284.1| recombination protein RecR [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 202
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 114/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +PG GP+SA+R H++ + L EA+ + KV C CG
Sbjct: 4 VYEGAVQDLIDEFGELPGIGPKSAQRMAFHVLAADSAAVERLIEALRAVKAKVRFCETCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D
Sbjct: 64 NIAEAPQCTICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G++L+
Sbjct: 124 LRVRELFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVGADLE 183
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 184 YADEVTLGRAFEGRRR 199
>gi|166367420|ref|YP_001659693.1| recombination protein RecR [Microcystis aeruginosa NIES-843]
gi|166089793|dbj|BAG04501.1| recombination protein [Microcystis aeruginosa NIES-843]
Length = 188
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 80/188 (42%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ L ++PG GP+SA+R L+++K+ EQ LA+A+ +V LC +C ++ C
Sbjct: 2 IEQLQKLPGVGPKSAQRLALYILKRPEQDAIELAQAIVAAKKQVGLCQVCFHLSAEPICE 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC + R+ I VV D D+ ALE+++ + YHVLGG +SP+D IGP+ + IQSL+ R
Sbjct: 62 ICRNPNRETGTICVVADSRDVIALEKTREYSGKYHVLGGVISPMDGIGPDQLNIQSLVTR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ KKI+E+I AIS ++EG+TT YI LK K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 122 VSQKKIQEVILAISPSVEGETTTLYIGGLLKPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180
Query: 194 AIRSRTVL 201
A+ R L
Sbjct: 181 ALEGRREL 188
>gi|325066587|ref|ZP_08125260.1| recombination protein RecR [Actinomyces oris K20]
gi|326772634|ref|ZP_08231918.1| recombination protein RecR [Actinomyces viscosus C505]
gi|326637266|gb|EGE38168.1| recombination protein RecR [Actinomyces viscosus C505]
Length = 202
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +PG GP+SA+R H++ + L EA+ + KV C CG
Sbjct: 4 VYEGAVQDLIDEFGELPGIGPKSAQRMAFHVLAADAAAVERLIEALRAVKAKVRFCETCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D
Sbjct: 64 NIAEAPQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G++L+
Sbjct: 124 LRVRELFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVGADLE 183
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 184 YADEVTLGRAFEGRRR 199
>gi|237716337|ref|ZP_04546818.1| recombination protein recR [Bacteroides sp. D1]
gi|229443984|gb|EEO49775.1| recombination protein recR [Bacteroides sp. D1]
Length = 220
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 16 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 75
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 76 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 135
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 136 GPNDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 195
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 196 DELEYADEVTLGRSIVNRTLF 216
>gi|268591258|ref|ZP_06125479.1| recombination protein RecR [Providencia rettgeri DSM 1131]
gi|291313229|gb|EFE53682.1| recombination protein RecR [Providencia rettgeri DSM 1131]
Length = 199
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + +I +VE AD++A+E++ + Y VL G LSPLD IGP D
Sbjct: 63 FTEQEVCNICDNPRRQQNGLICIVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLASETINEVILATNPTVEGEATANYIGQMCAQYGVAASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 MVDGTTLSHSLAGRQRL 199
>gi|34762299|ref|ZP_00143303.1| Recombination protein recR [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256027402|ref|ZP_05441236.1| recombination protein recR [Fusobacterium sp. D11]
gi|260497949|ref|ZP_05816066.1| recombination protein RecR [Fusobacterium sp. 3_1_33]
gi|289765366|ref|ZP_06524744.1| recombination protein recR [Fusobacterium sp. D11]
gi|27888021|gb|EAA25084.1| Recombination protein recR [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|260196510|gb|EEW94040.1| recombination protein RecR [Fusobacterium sp. 3_1_33]
gi|289716921|gb|EFD80933.1| recombination protein recR [Fusobacterium sp. D11]
Length = 197
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 115/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCSICSDNTRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|320546372|ref|ZP_08040688.1| recombination protein R [Streptococcus equinus ATCC 9812]
gi|320448982|gb|EFW89709.1| recombination protein R [Streptococcus equinus ATCC 9812]
Length = 206
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG G ++A R + + ++ + A+ + + ++ CSICG
Sbjct: 10 LYPAPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLSAKRELTYCSICG 69
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC+IC D+ R SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D
Sbjct: 70 NLTDDDPCSICTDKTRKRSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 129
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++
Sbjct: 130 INLKSLITRLMDSEVSEVIIATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIE 189
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 190 YADEVTLLRAIENRTEL 206
>gi|308185944|ref|YP_003930075.1| Recombination protein recR [Pantoea vagans C9-1]
gi|308056454|gb|ADO08626.1| Recombination protein recR [Pantoea vagans C9-1]
Length = 201
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPAD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQKF 199
>gi|194333714|ref|YP_002015574.1| recombination protein RecR [Prosthecochloris aestuarii DSM 271]
gi|229470336|sp|B4S790|RECR_PROA2 RecName: Full=Recombination protein recR
gi|194311532|gb|ACF45927.1| recombination protein RecR [Prosthecochloris aestuarii DSM 271]
Length = 204
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE+LI+ A++PG G ++A+R +H++ + + A A+ ++ KV C +C
Sbjct: 2 RYTSAAIESLIEEFAKLPGIGRKTAQRLAMHILHQHTDEVEKFASALIDVKQKVIHCRVC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPCAIC + RD SVI VVE +D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDIGADPCAICCAKGRDRSVICVVETPSDVLAFEKTGQYRGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIER---IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DIG++ L+ R + ++ ELI A++ T+EG+TT YI LK + V++T++A GIP
Sbjct: 122 PDDIGVKELLSRLSPDDGPRVSELIMALNPTVEGETTVLYISKLLKPLGVQVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ R+ L
Sbjct: 182 VGAELEFVDEATLSRALEGRSAL 204
>gi|311280616|ref|YP_003942847.1| recombination protein RecR [Enterobacter cloacae SCF1]
gi|308749811|gb|ADO49563.1| recombination protein RecR [Enterobacter cloacae SCF1]
Length = 201
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + + E+I A + T+EG+ TA+YI + + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAAETLSEVILATNPTVEGEATANYIAELCEQYGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|307129960|ref|YP_003881976.1| gap repair protein [Dickeya dadantii 3937]
gi|306527489|gb|ADM97419.1| gap repair protein [Dickeya dadantii 3937]
Length = 201
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLATETISEVILATNPTVEGDATANYIAELCAENGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|126667420|ref|ZP_01738392.1| recombination protein RecR [Marinobacter sp. ELB17]
gi|126628176|gb|EAZ98801.1| recombination protein RecR [Marinobacter sp. ELB17]
Length = 200
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ L++ L +PG G ++A+R HL+++ L +A+ + V C C
Sbjct: 2 VFSPLVDELVESLRVLPGVGQKTAQRMAFHLLERARSGGSRLGDALGRAMDGVRRCDRCQ 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N TD C IC + +R+ V+ VVE +DL A+E++ A Y VL G LSP+D IGPE
Sbjct: 62 NFADTDVCGICENPERNTGVLCVVESPSDLLAIEQAGDYRAGYFVLMGHLSPIDGIGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L+ R+ + + ELI A + T+EG+ TAHYI D+L +V ITRLA+GIP+G EL
Sbjct: 122 IGIDRLVHRVRDEGVTELILATNPTVEGEATAHYIADRLADNNVLITRLAHGIPVGGELG 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A R R L
Sbjct: 182 YVDGFTLTHAFRGRKPL 198
>gi|303228676|ref|ZP_07315501.1| recombination protein RecR [Veillonella atypica ACS-134-V-Col7a]
gi|302516656|gb|EFL58573.1| recombination protein RecR [Veillonella atypica ACS-134-V-Col7a]
Length = 198
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 114/194 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L++ L R+PG G +SARR HLV+ ++ + L + CSIC N+
Sbjct: 3 NALERLVEQLRRLPGIGSKSARRLAYHLVEMPQEEVDRLVNTIVEAKGATRHCSICFNLS 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSPL+ IG EDI +
Sbjct: 63 AQDPCEFCSNHNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPLEGIGAEDIRV 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D
Sbjct: 123 KELIARLRDGVVQEVILATDPDVEGEATALYLARLLAPTGIKVTRIARGVPVGGDIEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ +R +
Sbjct: 183 ELTLGGAVVNRQEM 196
>gi|237720984|ref|ZP_04551465.1| recombination protein recR [Bacteroides sp. 2_2_4]
gi|229449819|gb|EEO55610.1| recombination protein recR [Bacteroides sp. 2_2_4]
Length = 205
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDVSTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|157369380|ref|YP_001477369.1| recombination protein RecR [Serratia proteamaculans 568]
gi|166918742|sp|A8GAV1|RECR_SERP5 RecName: Full=Recombination protein recR
gi|157321144|gb|ABV40241.1| recombination protein RecR [Serratia proteamaculans 568]
Length = 201
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + + E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEKESVTEVILATNPTVEGDATANYIAEMCGQYGVVASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R V+
Sbjct: 183 MVDGTTLSHSLAGRHVI 199
>gi|145299|gb|AAA23459.1| recR ORF [Escherichia coli]
Length = 201
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R ++++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTVLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|237743984|ref|ZP_04574465.1| recombination protein recR [Fusobacterium sp. 7_1]
gi|229433015|gb|EEO43227.1| recombination protein recR [Fusobacterium sp. 7_1]
Length = 197
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 115/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKKFAEALLAVKENVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCSICSDNTRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|145632688|ref|ZP_01788422.1| recombination protein RecR [Haemophilus influenzae 3655]
gi|229844397|ref|ZP_04464537.1| recombination protein RecR [Haemophilus influenzae 6P18H1]
gi|144986883|gb|EDJ93435.1| recombination protein RecR [Haemophilus influenzae 3655]
gi|229812646|gb|EEP48335.1| recombination protein RecR [Haemophilus influenzae 6P18H1]
Length = 200
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQQNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRQI 199
>gi|188534597|ref|YP_001908394.1| Recombination protein [Erwinia tasmaniensis Et1/99]
gi|229890149|sp|B2VCL6|RECR_ERWT9 RecName: Full=Recombination protein recR
gi|188029639|emb|CAO97518.1| Recombination protein [Erwinia tasmaniensis Et1/99]
Length = 201
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + +I VVE AD+ A+E++ + Y VL G LSPLD IGP D
Sbjct: 63 FTEQEICTICANPRRQHNGLICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLETESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQKF 199
>gi|322372540|ref|ZP_08047076.1| recombination protein RecR [Streptococcus sp. C150]
gi|321277582|gb|EFX54651.1| recombination protein RecR [Streptococcus sp. C150]
Length = 198
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC D+ RD + I+VVED D+ A+E+ + + LYHVL G +SP++ IGP+D
Sbjct: 62 RLTDDDPCNICTDETRDRTKILVVEDSKDVSAMEKIQEYHGLYHVLQGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVEEVIIATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|320333444|ref|YP_004170155.1| Recombination protein recR [Deinococcus maricopensis DSM 21211]
gi|319754733|gb|ADV66490.1| Recombination protein recR [Deinococcus maricopensis DSM 21211]
Length = 198
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L+R+PG GP+SA+R HL ++ + LA A+ + + C C N
Sbjct: 3 YPPSLVALIRELSRLPGVGPKSAQRLAFHLFEQPREDTERLASAIMSAKRDLHTCPKCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD +I VVE+ DL A+ERS LYHVL G++SP++ +GP+ +
Sbjct: 63 ITDREFCDVCTDPARDQELICVVEEPGDLIAIERSGEYRGLYHVLHGAISPMNGVGPDKL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R+ E+I A S T+EG+ T+ Y+ L+ + ++R+AYG+P+G L+Y
Sbjct: 123 MIKPLLPRVAAG--MEVILATSTTVEGEATSLYLQRLLEPLGATVSRIAYGLPVGGALEY 180
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ R L
Sbjct: 181 ADEVTLGRALTGRQRL 196
>gi|192359825|ref|YP_001982900.1| recombination protein RecR [Cellvibrio japonicus Ueda107]
gi|190685990|gb|ACE83668.1| recombination protein RecR [Cellvibrio japonicus Ueda107]
Length = 197
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ L+ L +PG GP+SA+R LHL+++ LA ++ V C C
Sbjct: 1 MFSPLIDELMSSLRCLPGVGPKSAQRMALHLLERDRVGAERLARSLHKAIEGVGRCRRCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC +++RD ++ VVE AD+ A+E++ Y VL G LSP+D +GPED
Sbjct: 61 TLTEQELCGICRNERRDPGLLCVVETPADVLAIEQAGTYQGKYFVLLGHLSPIDGVGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L++ ++ + + E+I A + T+EG+ TA YI ++ K ++V ++R+A+G+P+G EL+
Sbjct: 121 IGIDQLLQLLQQEPVTEVILATNPTVEGEATAFYISERAKNLNVTVSRIAHGVPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
++D GT+ A SR L
Sbjct: 181 FIDGGTLAHAFSSRRSL 197
>gi|197124083|ref|YP_002136034.1| recombination protein RecR [Anaeromyxobacter sp. K]
gi|196173932|gb|ACG74905.1| recombination protein RecR [Anaeromyxobacter sp. K]
Length = 198
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 119/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I L+K LAR+PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 6 PIARLVKELARLPGIGEKTAQRLAFHILKAGPGYAGDLAAAIAGVVRDVRLCSTCQTLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPCAIC D +RDA + VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+
Sbjct: 66 QDPCAICRDPERDARTLCVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D
Sbjct: 126 ELLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQ 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLARALAGRREL 198
>gi|299132606|ref|ZP_07025801.1| recombination protein RecR [Afipia sp. 1NLS2]
gi|298592743|gb|EFI52943.1| recombination protein RecR [Afipia sp. 1NLS2]
Length = 201
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 111/201 (55%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MASTVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMTPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC IC D +RD S+I+VV DVADLWALER+ A + YHVLG +LSPLD I
Sbjct: 61 HTCGNIDTQNPCTICTDTRRDPSIIVVVADVADLWALERAAATHGRYHVLGATLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R + ++ E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVARAQAPEVTEIILALNATVDGQTTAHYVTDMLQEAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|291303586|ref|YP_003514864.1| recombination protein RecR [Stackebrandtia nassauensis DSM 44728]
gi|290572806|gb|ADD45771.1| recombination protein RecR [Stackebrandtia nassauensis DSM 44728]
Length = 199
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 117/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +L+ L R+PG GP+SA+R H++ + + LAEA+ + +V C ICG
Sbjct: 1 MYEGALGDLVDELGRLPGIGPKSAQRIAFHILGTDKADVDRLAEALRVVKERVRFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV T + C IC D +R +I VVE+ D+ A+ER+ YHVLGG+++PLD +GPED
Sbjct: 61 NVATEEKCRICRDARRTDEMICVVEEPKDVIAIERTGEFRGRYHVLGGAINPLDGVGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R++ +EL+ A EG+ TA Y+ + + + ++RLA G+P+G +L+
Sbjct: 121 LRIRELMTRLQAGVTKELVIATDPNTEGEATATYLALMITPMGLTVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEVTLGRAFEGRRT 196
>gi|324995314|gb|EGC27226.1| recombination protein R [Streptococcus sanguinis SK678]
gi|327468993|gb|EGF14465.1| recombination protein R [Streptococcus sanguinis SK330]
Length = 198
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S +++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTLLIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|254780762|ref|YP_003065175.1| recombination protein RecR [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040439|gb|ACT57235.1| recombination protein RecR [Candidatus Liberibacter asiaticus str.
psy62]
Length = 201
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC
Sbjct: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI
Sbjct: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG
Sbjct: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SELDYLDDGTIFEAIRSRTVL
Sbjct: 181 SELDYLDDGTIFEAIRSRTVL 201
>gi|260769013|ref|ZP_05877947.1| recombination protein RecR [Vibrio furnissii CIP 102972]
gi|260617043|gb|EEX42228.1| recombination protein RecR [Vibrio furnissii CIP 102972]
Length = 199
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMVEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICQNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R++ I E+I A + T+EG+ TAHYI + + DV +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDFRLQRGGISEVILATNPTVEGEATAHYIAELCREHDVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|50903606|gb|AAT87321.1| RecR [Streptococcus pyogenes MGAS10394]
Length = 228
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 32 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 91
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 92 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 151
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 152 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 211
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 212 YADEVTLLRAIENRTEL 228
>gi|303232546|ref|ZP_07319232.1| recombination protein RecR [Atopobium vaginae PB189-T1-4]
gi|302481333|gb|EFL44407.1| recombination protein RecR [Atopobium vaginae PB189-T1-4]
Length = 199
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ+ ++ ++ ++PG GP+SA R L+++ Q LA+A+ + ++V C
Sbjct: 1 MQQSCAA--LQCVLDEFGKLPGIGPKSAARIAYFLMEQPTQDATRLAQAIIRLKDEVHFC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C T D C C D RD + I VV + D+ A+E + A + LYHVLGG +SP+D I
Sbjct: 59 PVCFTYATDDLCTYCSDSSRDTTTICVVAEPKDVAAIENTHAYHGLYHVLGGVISPMDNI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE++ + L R+ + + E+I A S +EG+TTA Y+ LK + V TRLA G+P+G
Sbjct: 119 GPEELHVAELTRRLANQTVHEVILATSPNVEGETTAIYLARLLKPLGVTTTRLASGLPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ T+ AI +R L
Sbjct: 179 GDLEYADEVTLGRAIEARREL 199
>gi|90020984|ref|YP_526811.1| recombinational DNA repair protein [Saccharophagus degradans 2-40]
gi|122996350|sp|Q21L30|RECR_SACD2 RecName: Full=Recombination protein recR
gi|89950584|gb|ABD80599.1| recombination protein RecR [Saccharophagus degradans 2-40]
Length = 197
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ LI L +PG GP+SA+R LHL+++ + L+E +A V C C
Sbjct: 1 MFSPLIDQLINSLRHLPGVGPKSAQRMALHLLERDREGAQNLSEVLAKAVEHVHRCQQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R+ + +VE AD+ A+E S + Y VL G LSP+D IGP++
Sbjct: 61 TLTEQALCNICSNARRNRKELCIVETPADVIAIETSAVFSGYYFVLLGRLSPIDGIGPKE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R +I E+I A + TIEG+ TAHYI ++ K +K++R+A+GIP+G EL+
Sbjct: 121 IGMDVLASRFAEGEIEEVIIATNPTIEGEATAHYISERAKAQGIKVSRIAHGIPIGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ AI R +
Sbjct: 181 YVDGGTLAHAISRRQEI 197
>gi|332361734|gb|EGJ39538.1| recombination protein R [Streptococcus sanguinis SK1056]
Length = 198
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELIYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLIRAIENRTEL 198
>gi|85058669|ref|YP_454371.1| recombination protein RecR [Sodalis glossinidius str. 'morsitans']
gi|123519908|sp|Q2NV59|RECR_SODGM RecName: Full=Recombination protein recR
gi|84779189|dbj|BAE73966.1| recombination protein RecR [Sodalis glossinidius str. 'morsitans']
Length = 201
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L + L +PG GP+SA+R HL+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLEALTEALRCLPGVGPKSAQRMVFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC + +R S I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQPVCTICANPRRQQSGQICVVESPADIHAIEQTGQFAGSYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLQERLENESIEEVILATNPTVEGEATANYIAEMCAHYGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|313124286|ref|YP_004034545.1| recombination protein recr [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280849|gb|ADQ61568.1| Recombination protein recR [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685700|gb|EGD27779.1| recombination protein R [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 199
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN
Sbjct: 3 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I
Sbjct: 63 ITEQDPCAICSNPARDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANLITLKRAVQGRTEL 199
>gi|161504339|ref|YP_001571451.1| recombination protein RecR [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189029371|sp|A9MLY7|RECR_SALAR RecName: Full=Recombination protein recR
gi|160865686|gb|ABX22309.1| hypothetical protein SARI_02448 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 201
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ ++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMAEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICANPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLVSEKISELILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|170078351|ref|YP_001734989.1| recombination protein [Synechococcus sp. PCC 7002]
gi|169886020|gb|ACA99733.1| recombination protein [Synechococcus sp. PCC 7002]
Length = 189
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 75/188 (39%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ R+PG GP++A+R L+++K+ E+ + A+A+ N +V +C C ++ T C
Sbjct: 2 IEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVCD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC + QR+ VI VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ+L++R
Sbjct: 62 ICRNPQREPDVICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ +K +E+I AI+ ++EG+TT Y+ L+ K+TR+A+G+PMG +L+Y D+ T+
Sbjct: 122 VSAEKTKEVILAINPSVEGETTTLYLAQLLRPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180
Query: 194 AIRSRTVL 201
A+ R L
Sbjct: 181 ALEGRREL 188
>gi|116333251|ref|YP_794778.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus
brevis ATCC 367]
gi|122270061|sp|Q03SS5|RECR_LACBA RecName: Full=Recombination protein recR
gi|116098598|gb|ABJ63747.1| DNA replication and repair protein RecR [Lactobacillus brevis ATCC
367]
Length = 199
Score = 289 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G +SA R + E + ++A+ + CSICGN
Sbjct: 3 YPEPIAQLIDGYMKLPGIGQKSATRLAFFTIDMAEDDVTAFSKALIAAKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC+IC D+ RD + ++VVE D+ +E+ K + LYHVL G +SP++ GPED+
Sbjct: 63 ITEGDPCSICADKTRDQTHVLVVEQPKDIMVMEKMKEYHGLYHVLHGVMSPIEGKGPEDL 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SLI R++ I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++
Sbjct: 123 NIASLINRLQQNPNIKEVIIATNATPEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A+ RT +
Sbjct: 183 YADEMTLFKAVEGRTEM 199
>gi|26246487|ref|NP_752526.1| recombination protein RecR [Escherichia coli CFT073]
gi|26106885|gb|AAN79070.1|AE016756_253 Recombination protein recR [Escherichia coli CFT073]
Length = 201
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD +A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADXYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|110640733|ref|YP_668461.1| recombination protein RecR [Escherichia coli 536]
gi|123344293|sp|Q0TKG9|RECR_ECOL5 RecName: Full=Recombination protein recR
gi|110342325|gb|ABG68562.1| recombination protein RecR [Escherichia coli 536]
Length = 201
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+ + +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQTLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRKENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|300721960|ref|YP_003711240.1| gap repair protein [Xenorhabdus nematophila ATCC 19061]
gi|297628457|emb|CBJ89022.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Xenorhabdus nematophila ATCC 19061]
Length = 202
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCQYCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEQCAICANPRRQQNRQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSAEILSEIILATNPTVEGEATANYIAEMCSQYGVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLLGRQKI 199
>gi|220918862|ref|YP_002494166.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956716|gb|ACL67100.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-1]
Length = 198
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 82/193 (42%), Positives = 118/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I L+K LAR+PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 6 PIARLVKELARLPGIGEKTAQRLAFHILKAGAGYAGDLAAAIAGVVRDVRLCSTCQTLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPCAIC D +RD + VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+
Sbjct: 66 QDPCAICRDPERDPRTLCVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D
Sbjct: 126 ELLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQ 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLARALAGRREL 198
>gi|284036517|ref|YP_003386447.1| recombination protein RecR [Spirosoma linguale DSM 74]
gi|283815810|gb|ADB37648.1| recombination protein RecR [Spirosoma linguale DSM 74]
Length = 203
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 125/198 (63%), Gaps = 3/198 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K IE+ + ++++PG G ++A R LHL+K+ E+ LA+++ + V C C
Sbjct: 2 EYPSKLIEDAVNEVSKLPGIGKKTALRLVLHLLKRDEEQTETLAQSLTAMRTNVKYCRKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC +RD S+I VVED D+ A+E + LYHVLGG +SP++ IGP
Sbjct: 62 HNLSDNEVCTICASNKRDQSLICVVEDTRDVLAIENTAQYRGLYHVLGGIISPVEGIGPS 121
Query: 124 DIGIQSLIERIEV---KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
D+ I SL+ R+ +++RE+I AIS T+EG TTA Y+ KLK ++KI+ +A G+P+G
Sbjct: 122 DLQIDSLMNRLRDAGSEQVREIILAISPTMEGDTTAFYLQKKLKPFNLKISTIARGVPIG 181
Query: 181 SELDYLDDGTIFEAIRSR 198
+L+Y D+ T+ +I SR
Sbjct: 182 GDLEYADEVTLGRSILSR 199
>gi|115526799|ref|YP_783710.1| recombination protein RecR [Rhodopseudomonas palustris BisA53]
gi|122294450|sp|Q07H54|RECR_RHOP5 RecName: Full=Recombination protein recR
gi|115520746|gb|ABJ08730.1| recombination protein RecR [Rhodopseudomonas palustris BisA53]
Length = 201
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++L+R+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MATAVAGPEIERLIQLLSRLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC +C D +RD ++I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 KTCGNIDTQNPCTVCTDPRRDPAIIVVVADVADLWALERAHASNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVARAHDPQVSEIVLALNATVDGQTTAHYITDLLMEANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|302530932|ref|ZP_07283274.1| recombination protein RecR [Streptomyces sp. AA4]
gi|302439827|gb|EFL11643.1| recombination protein RecR [Streptomyces sp. AA4]
Length = 198
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + L + + + V C ICG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQDVLGKVKEGVQFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D++RD +VI VVE+ D+ A+ER++ YHVLGG+L PL IGPE
Sbjct: 61 NVSEQETCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ ++ L++RI ++E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L
Sbjct: 121 LRMRQLLQRIGEADVKEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D+ T+ A+ R L
Sbjct: 181 EFADELTLGRALSGRRAL 198
>gi|254506919|ref|ZP_05119058.1| recombination protein RecR [Vibrio parahaemolyticus 16]
gi|219550204|gb|EED27190.1| recombination protein RecR [Vibrio parahaemolyticus 16]
Length = 200
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKESQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|90416004|ref|ZP_01223937.1| recombination protein RecR [marine gamma proteobacterium HTCC2207]
gi|90332378|gb|EAS47575.1| recombination protein RecR [marine gamma proteobacterium HTCC2207]
Length = 197
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 86/197 (43%), Positives = 129/197 (65%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G I+ LI L +PG G +SA+R LHL+++ LAE++ KV C+ C
Sbjct: 1 MYGNVIDQLIDALRVLPGVGNKSAQRMALHLLERDRSGATRLAESLVEAVEKVGRCAQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + CAIC +++R A I VVE+ ADL+A+E++ + Y VL G LSP+D IGPE
Sbjct: 61 SLTEHEVCAICRNERRLADQICVVENPADLYAIEQAGSFRGKYFVLLGHLSPIDGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ER++ I ELI A + T+EG+ TAH+I DK K + V+++R+AYG+PMG EL+
Sbjct: 121 LGIDQLVERLKNGYISELILATNLTVEGEATAHFIADKAKALGVEVSRIAYGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ A++SR L
Sbjct: 181 YVDGGTLNMALQSRKSL 197
>gi|260912246|ref|ZP_05918798.1| recombination protein R [Prevotella sp. oral taxon 472 str. F0295]
gi|260633680|gb|EEX51818.1| recombination protein R [Prevotella sp. oral taxon 472 str. F0295]
Length = 204
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + +R+PG G ++A R LHL+K + + + + ++ + + C
Sbjct: 1 MEQQYPSALLEKAVSEFSRLPGIGRKTALRLVLHLLKTRVEDVESFSSSILKVRKDIKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ CAIC + +RDA+ I VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 61 QLCHNISDTETCAICANPRRDAATICVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL+ER+ + E+I A+S+T+EG TT +YI K+ VK + +A GI +G
Sbjct: 121 GPNDIEINSLVERVANGGVNEVILALSSTMEGDTTNYYISRKIAPYKVKTSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT +
Sbjct: 181 DEIEYTDEVTLGRSILNRTSI 201
>gi|296447824|ref|ZP_06889737.1| recombination protein RecR [Methylosinus trichosporium OB3b]
gi|296254683|gb|EFH01797.1| recombination protein RecR [Methylosinus trichosporium OB3b]
Length = 201
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 113/201 (56%), Positives = 156/201 (77%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++I G EIE L+++LAR+PG GPRSARRA LHL++K+++LLGPL EAM + ++ C
Sbjct: 1 MAERIAGPEIERLVQLLARLPGLGPRSARRAVLHLIRKRDELLGPLGEAMRVAHERILAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT+DPCAIC D +RDA ++++VE VADLWALER+ + A YHVLGG LSPLD +
Sbjct: 61 SVCGNIDTSDPCAICRDPRRDAGLLVIVETVADLWALERAGLLAARYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + SL++RI +RE I A++AT++GQTTAHY+ D L + VK TRLA+G+P+G
Sbjct: 121 GPSELNMASLVQRIGEGGVREAIIAVNATVDGQTTAHYLADLLAPLGVKTTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+ RT
Sbjct: 181 GELDYLDEGTLAAALDRRTPF 201
>gi|224539567|ref|ZP_03680106.1| hypothetical protein BACCELL_04474 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518801|gb|EEF87906.1| hypothetical protein BACCELL_04474 [Bacteroides cellulosilyticus
DSM 14838]
Length = 205
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFSSILLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 RVCHNISDTETCRICANPQRDASTVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVRRVAAGGIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|90426317|ref|YP_534687.1| recombination protein RecR [Rhodopseudomonas palustris BisB18]
gi|122474846|sp|Q20WW8|RECR_RHOPB RecName: Full=Recombination protein recR
gi|90108331|gb|ABD90368.1| recombination protein RecR [Rhodopseudomonas palustris BisB18]
Length = 201
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LA++PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C
Sbjct: 1 MAAAVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A + YHVLG +LSPLD +
Sbjct: 61 KVCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERAHAASGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L VK+TRLA+G+P+G
Sbjct: 121 GPDDLSIDALVARAHDPQVSEIVLALNATVDGQTTAHYITDLLMEAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|160886051|ref|ZP_02067054.1| hypothetical protein BACOVA_04057 [Bacteroides ovatus ATCC 8483]
gi|156108864|gb|EDO10609.1| hypothetical protein BACOVA_04057 [Bacteroides ovatus ATCC 8483]
Length = 241
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 37 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 96
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 97 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 156
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 157 GPSDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISIG 216
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 217 DELEYADEVTLGRSIVNRTLF 237
>gi|54022259|ref|YP_116501.1| recombination protein RecR [Nocardia farcinica IFM 10152]
gi|73621501|sp|Q5Z354|RECR_NOCFA RecName: Full=Recombination protein recR
gi|54013767|dbj|BAD55137.1| putative recombination and repair protein [Nocardia farcinica IFM
10152]
Length = 202
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL++ + + L A+ + + V C +CG
Sbjct: 1 MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLQVEPPEIDRLQAALQKVRDGVQFCVVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V + C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 TVSDGELCRICADPRRDRTMICVVEEPKDVQAIERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TRLA G+PM
Sbjct: 121 LRIRELLARIGNQDDGVDVAEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADELTLGRALSGRRAL 202
>gi|145630380|ref|ZP_01786161.1| recombination protein RecR [Haemophilus influenzae R3021]
gi|144984115|gb|EDJ91552.1| recombination protein RecR [Haemophilus influenzae R3021]
Length = 200
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+LI+ L +PG GP+SA+R HL+++ LA A+ +++ CS C +
Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSRIGHCSQCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCHQHNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRQI 199
>gi|241895202|ref|ZP_04782498.1| recombination protein RecR [Weissella paramesenteroides ATCC 33313]
gi|241871508|gb|EER75259.1| recombination protein RecR [Weissella paramesenteroides ATCC 33313]
Length = 199
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + E+ + A+++ + + CSICGN
Sbjct: 3 YPEPIAKLIDSYTKLPGIGIKTATRLAFYTIDMPEEEVTSFAQSLISAKRDLQFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D+ RD S ++VV +V DL A+E + LYHVL G LSPL+ GP+DI
Sbjct: 63 LTETDPCVICSDKNRDQSQVLVVAEVKDLMAIENTGEYRGLYHVLHGVLSPLEGKGPDDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL+ R + + I+E+I A +A EG+ TA Y+ LK +K++RLA G+ +GS++D
Sbjct: 123 NIESLVNRLQKDETIQEVIVATNANAEGEATAMYLSRLLKPAGLKVSRLATGLSVGSDID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +A+ RT L
Sbjct: 183 YADQITLIKAVEGRTQL 199
>gi|86160053|ref|YP_466838.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-C]
gi|123496736|sp|Q2IFP4|RECR_ANADE RecName: Full=Recombination protein recR
gi|85776564|gb|ABC83401.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-C]
Length = 198
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I L+K LA++PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 6 PIARLVKELAKLPGIGEKTAQRLAFHILKAGAGYAGDLAAAIAGVVRDVRLCSTCQTLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPCAIC D +RDA +I VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+
Sbjct: 66 QDPCAICRDPERDARMICVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D
Sbjct: 126 ELLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQ 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLARALAGRREL 198
>gi|299770308|ref|YP_003732334.1| recombination protein RecR [Acinetobacter sp. DR1]
gi|298700396|gb|ADI90961.1| recombination protein RecR [Acinetobacter sp. DR1]
Length = 198
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 124/194 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C
Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC +R+ ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTEHEICDICASTEREDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI LI+R+ KI E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+
Sbjct: 121 IGIPYLIQRLSQGKIEEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|81427952|ref|YP_394951.1| recombination DNA repair protein RecR [Lactobacillus sakei subsp.
sakei 23K]
gi|123564718|sp|Q38YT8|RECR_LACSS RecName: Full=Recombination protein recR
gi|78609593|emb|CAI54639.1| Recombination DNA repair protein RecR [Lactobacillus sakei subsp.
sakei 23K]
Length = 198
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 117/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ ++PG G ++A R + + E + A+ + + + CS+CGN
Sbjct: 3 YPEPIAKLIESYMKLPGIGNKTATRLAFYTIDMNEDDVTNFAKNLISARRDLHYCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D R +I+VVE D+ ++ER + LYHVL G LSP++ GP+DI
Sbjct: 63 ITDEDPCEICRDTARSQEMILVVEQPKDVMSMERMNDYHGLYHVLHGVLSPIEGKGPDDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +LI+R++ +E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NIANLIKRLQKTPAKEVIIATNATPEGEATAMYISRLIKPAGIKVTRLAHGLAVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 183 ADEMTLLKAVEGRQEI 198
>gi|284989078|ref|YP_003407632.1| recombination protein RecR [Geodermatophilus obscurus DSM 43160]
gi|284062323|gb|ADB73261.1| recombination protein RecR [Geodermatophilus obscurus DSM 43160]
Length = 199
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + +G L A+ + +V CS C
Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLAAESADVGRLVAALQRVQAEVRFCSTCY 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +R VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D
Sbjct: 61 NVAEGEQCRICRDPRRADDVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ + ELI A +EG+ TA Y+ + + + ++RLA G+P+G +L+
Sbjct: 121 LRVKELMTRLMSGAVTELIIATDPNLEGEATAAYLARLVGPLGLAVSRLASGLPVGGDLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +
Sbjct: 181 YADEVTLGRAFEGRRRI 197
>gi|104774439|ref|YP_619419.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514538|ref|YP_813444.1| recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274730|sp|Q048W6|RECR_LACDB RecName: Full=Recombination protein recR
gi|122983905|sp|Q1G921|RECR_LACDA RecName: Full=Recombination protein recR
gi|103423520|emb|CAI98422.1| Recombination protein RecR [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093853|gb|ABJ59006.1| DNA replication and repair protein RecR [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126249|gb|ADY85579.1| Recombination protein recR [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 199
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN
Sbjct: 3 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I
Sbjct: 63 ITEQDPCAICSNPVRDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++
Sbjct: 123 NIKSLIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANLITLKRAVQGRTEL 199
>gi|329296815|ref|ZP_08254151.1| recombination protein RecR [Plautia stali symbiont]
Length = 201
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ LA+A+ ++ CS C
Sbjct: 3 TSPLLEALMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMCLAQALTRAMAEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLERETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|310778209|ref|YP_003966542.1| recombination protein RecR [Ilyobacter polytropus DSM 2926]
gi|309747532|gb|ADO82194.1| recombination protein RecR [Ilyobacter polytropus DSM 2926]
Length = 197
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H+++ + + AEA+ N+ + V C ICG
Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSATRLAFHVLEMDDMEVNIFAEAIKNVKSSVKKCVICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + C +C D+ R +I VVED D+ + E++K YHVL G + PL+ + P+
Sbjct: 61 NFGEEETCDVCRDEYRTNEIICVVEDTRDIVSFEKAKKYRGRYHVLNGKIDPLNGMTPDK 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ER+ + ++E+I A++ +EG+TTA Y+ + LK +K+T++A GIPMG ++
Sbjct: 121 LNIKSLVERVAAEDVKEVILAMNPDLEGETTAMYLTNLLKPFGIKVTKIASGIPMGGNIE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI +A+ R L
Sbjct: 181 FSDIATISKALEGRREL 197
>gi|295094178|emb|CBK83269.1| recombination protein RecR [Coprococcus sp. ART55/1]
Length = 199
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 114/198 (57%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ G E+ LI+ L R+PG G ++A+R H++ E+ L++A+ N + CS C
Sbjct: 2 EVYGGEVNRLIEGLGRLPGIGSKTAQRLAFHIISMPEERALALSDAIVNAKKNIKYCSCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC R+ VI+VVE DL A ER+ + +YHVL G ++P IGP
Sbjct: 62 YTITDREVCPICSSPNRNHKVIMVVETPRDLAAYERTGQFDGVYHVLHGVINPALGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I L+ R++ + + ELI A + EG+ TA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIRISELMRRLQNEDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R L
Sbjct: 182 ECIDEVTLLRALEGRVYL 199
>gi|163814834|ref|ZP_02206222.1| hypothetical protein COPEUT_00984 [Coprococcus eutactus ATCC 27759]
gi|158449773|gb|EDP26768.1| hypothetical protein COPEUT_00984 [Coprococcus eutactus ATCC 27759]
Length = 199
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 113/198 (57%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ G E+ LI+ L R+PG G ++A+R H++ E L++A+ N + CS C
Sbjct: 2 EVYGGEVNRLIEELGRLPGIGTKTAQRLAFHIISMPEDRAFALSDAIVNAKKNIKYCSCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C IC R+ +I+VVE DL A ER+ + +YHVL G ++P IGP
Sbjct: 62 YTITDREVCPICSSPNRNHKLIMVVETPRDLAAYERTGQFDGVYHVLHGVINPALGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I L+ R++ + + ELI A + EG+ TA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKISELMRRLQSEDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R L
Sbjct: 182 ECIDEVTLLRALEGRVYL 199
>gi|270263613|ref|ZP_06191882.1| recombination protein RecR [Serratia odorifera 4Rx13]
gi|270042497|gb|EFA15592.1| recombination protein RecR [Serratia odorifera 4Rx13]
Length = 201
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQDICTICANPRRLQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEKESITEVILATNPTVEGDATANYIAEMCGQYGVVASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R V+
Sbjct: 183 MVDGTTLSHSLAGRNVI 199
>gi|254555741|ref|YP_003062158.1| recombination protein RecR [Lactobacillus plantarum JDM1]
gi|254044668|gb|ACT61461.1| recombination protein RecR [Lactobacillus plantarum JDM1]
Length = 199
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + + A+++ + CSICGN
Sbjct: 3 YPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S ++VVE+ D+ A+E+ K N LYHVL G LSP+D GPEDI
Sbjct: 63 ITEDDPCVICKDKSRDQSTVLVVEEAKDVMAMEKVKEYNGLYHVLHGVLSPIDGKGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS++
Sbjct: 123 NIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSDIQ 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A+ R +
Sbjct: 183 YADEMTLFKAVEGRQEM 199
>gi|190149343|ref|YP_001967868.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307262657|ref|ZP_07544286.1| hypothetical protein appser13_850 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914474|gb|ACE60726.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871985|gb|EFN03700.1| hypothetical protein appser13_850 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 221
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENLI+ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 24 SPLLENLIEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 83
Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R + + VVE D+ A+E++ + Y VL G LSPLD IGP +I
Sbjct: 84 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 143
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+
Sbjct: 144 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 203
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 204 VDGTTLSHSFAGRRDI 219
>gi|110598754|ref|ZP_01387015.1| recombination protein RecR [Chlorobium ferrooxidans DSM 13031]
gi|110339618|gb|EAT58132.1| recombination protein RecR [Chlorobium ferrooxidans DSM 13031]
Length = 204
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI+ A++PG G ++A+R ++++ + LA A+ ++ +KV CS+C
Sbjct: 2 RYTSAAIEALIEEFAKLPGVGRKTAQRLAMYVLHEPRAEAEKLASALLDVKDKVIRCSVC 61
Query: 64 GNVD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV +DPCA+C + RD SVI VVE D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDKESDPCAVCSSRARDRSVICVVESPVDMLAFEKTGFYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ R E +++E++ A++ TIEG+TT+ Y+ LK + V++T++A GIP
Sbjct: 122 PDDIKVRELLVRFSGQESGEVKEVVLALNPTIEGETTSLYLSKLLKPLGVQVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 VGAELEFVDEATLSRAMEGRSAM 204
>gi|170718442|ref|YP_001783660.1| recombination protein RecR [Haemophilus somnus 2336]
gi|189029365|sp|B0UWK7|RECR_HAES2 RecName: Full=Recombination protein recR
gi|168826571|gb|ACA31942.1| recombination protein RecR [Haemophilus somnus 2336]
Length = 201
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C
Sbjct: 3 SSPLLENLIEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLAGALTEAMSKIGHCTHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R S + VVE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEESCAICNNPRRQNSGFLCVVEQPSDIPAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG+ TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQHESFYEVILATNPTVEGEATANYIAEMCFQHNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 TVDGTTLSHSLIGRREI 199
>gi|332290072|ref|YP_004420924.1| recombination protein RecR [Gallibacterium anatis UMN179]
gi|330432968|gb|AEC18027.1| recombination protein RecR [Gallibacterium anatis UMN179]
Length = 200
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ L+ L +PG GP+SA+R +L+++ LA+ + + CS C
Sbjct: 4 SPLLDELMDALRCLPGVGPKSAQRMAYYLLQRDRSGAMNLAKTLTEAMAHIGHCSQCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC + +R + + +VE +D+ A+E++ + Y VL G LSPLD IGP++I
Sbjct: 64 TEEEVCNICNNYRRQENGQLCIVEMPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +R++ + E+I A + TIEG TA+YI + + VK++R+A+GIP+G EL+
Sbjct: 124 GLDLLQKRLQTESFSEVILATNPTIEGDATANYIAEMCQQYGVKVSRIAHGIPVGGELEM 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ + R L
Sbjct: 184 VDGTTLSHSFIGRREL 199
>gi|260772462|ref|ZP_05881378.1| recombination protein RecR [Vibrio metschnikovii CIP 69.14]
gi|260611601|gb|EEX36804.1| recombination protein RecR [Vibrio metschnikovii CIP 69.14]
Length = 203
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA+ +V C+ C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALNQAMVEVGHCAECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQEVCDICRNPKRQENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ I E+I A + T+EG+ TAHYI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDTLDFRLQKGGISEVILATNPTVEGEATAHYIAELCHEHQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 LVDGTTLSHSLLGRQKF 199
>gi|146337880|ref|YP_001202928.1| recombination protein RecR [Bradyrhizobium sp. ORS278]
gi|172046977|sp|A4YLB4|RECR_BRASO RecName: Full=Recombination protein recR
gi|146190686|emb|CAL74690.1| Recombination protein recR [Bradyrhizobium sp. ORS278]
Length = 199
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 111/197 (56%), Positives = 154/197 (78%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C CG
Sbjct: 3 VAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMVPLASALQVAIDRIQVCKTCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT PC +C D +RD ++I+VV DVADLWALER+KA N YHVLGG+LSPLD +GP+D
Sbjct: 63 NIDTQSPCTVCTDPRRDPAMIVVVADVADLWALERAKASNGRYHVLGGTLSPLDGVGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G ELD
Sbjct: 123 LTIDALVQRAHAPEVSEIILALNATVDGQTTAHYITDLLQEANVKVTRLAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R RT+
Sbjct: 183 YLDEGTLSAAMRQRTLF 199
>gi|148258529|ref|YP_001243114.1| recombination protein RecR [Bradyrhizobium sp. BTAi1]
gi|172047315|sp|A5ESR4|RECR_BRASB RecName: Full=Recombination protein recR
gi|146410702|gb|ABQ39208.1| DNA replication and repair protein RecR [Bradyrhizobium sp. BTAi1]
Length = 199
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 112/197 (56%), Positives = 153/197 (77%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA AM ++ +C CG
Sbjct: 3 VAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMVPLASAMQVAIERIQVCKTCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT PC +C D +RD ++I+VV DVADLWALER+KA N YHVLGG+LSPLD +GP+D
Sbjct: 63 NIDTQSPCTVCTDPRRDPAMIVVVADVADLWALERAKASNGRYHVLGGTLSPLDGVGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G ELD
Sbjct: 123 LTIDALVQRAHAPEVSEIILALNATVDGQTTAHYITDLLQEANVKVTRLAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R RT+
Sbjct: 183 YLDEGTLSAAMRQRTLF 199
>gi|325579175|ref|ZP_08149131.1| recombination protein R [Haemophilus parainfluenzae ATCC 33392]
gi|301155602|emb|CBW15070.1| gap repair protein [Haemophilus parainfluenzae T3T1]
gi|325159410|gb|EGC71544.1| recombination protein R [Haemophilus parainfluenzae ATCC 33392]
Length = 200
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C +
Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEETCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEICHQHNIKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLTHSFLGRRQI 199
>gi|299144508|ref|ZP_07037587.1| recombination protein RecR [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517596|gb|EFI41336.1| recombination protein RecR [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 199
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 123/201 (61%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + K IENLI L ++PG G ++A+R H++ + + L++A+ + V C
Sbjct: 1 MKNR--AKPIENLINQLNKLPGVGNKTAQRLAYHIIDMDFEKVKALSDAITSAKENVKQC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SIC N DPC IC D RD SVI VVE D+ A+ER+ + +YHVL G++SP I
Sbjct: 59 SICANFTDIDPCKICNDTNRDESVICVVEYPKDVEAMERATCYHGMYHVLHGTISPNKGI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ I+ L++R+E I E+I A + T EG TTA YI L + +K TR+AYGIP+G
Sbjct: 119 GPNNLKIRELLKRLENNNIEEIIIATNPTAEGDTTALYISKLLSPLGIKTTRIAYGIPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ TI A+ +R +
Sbjct: 179 GDLEYYDELTISTALENRREI 199
>gi|269216236|ref|ZP_06160090.1| recombination protein RecR [Slackia exigua ATCC 700122]
gi|269130495|gb|EEZ61573.1| recombination protein RecR [Slackia exigua ATCC 700122]
Length = 198
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 117/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+ L+ L R+PG GP+SA+R ++ LA+A+ ++ + V C C N
Sbjct: 3 AAPAIQTLLDELERMPGVGPKSAQRIAYWILNSDRATAERLAQAVLDVKSSVHFCPRCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC RDA I VV + D+ A+ER+ LYHVLGG+LSP+D IGP+D+
Sbjct: 63 YAQGDVCDICGSANRDAHTICVVSEPRDIAAIERTAVYKGLYHVLGGALSPMDGIGPDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R+ V+ + E++ A + +EG+TTA Y+ +K + ++++RLA G+P+G +L++
Sbjct: 123 KVAELMARLAVEDVTEVLIATNPDVEGETTATYLARLIKPLGIEVSRLASGLPVGGDLEF 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ AI +R L
Sbjct: 183 ADEVTLGRAIEARRAL 198
>gi|332992411|gb|AEF02466.1| recombination protein RecR [Alteromonas sp. SN2]
Length = 199
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L +PG G +SA+R HL+++ + L+ + N + C C
Sbjct: 3 FSPLLNELIQALTCLPGVGNKSAQRMAFHLLERNRKGAIDLSNVLHNAMEHIHHCQRCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+
Sbjct: 63 FTEDELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R I E+I A + T+EG+ TAHYI +V+ +R+A+G+P+G EL+
Sbjct: 123 IGLNELETRFSAGGINEVILATNPTVEGEATAHYIAQLCAAHNVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A R L
Sbjct: 183 YIDGNTLTHAFSGRRKL 199
>gi|296876859|ref|ZP_06900907.1| recombination protein R [Streptococcus parasanguinis ATCC 15912]
gi|312867073|ref|ZP_07727283.1| recombination protein RecR [Streptococcus parasanguinis F0405]
gi|296432361|gb|EFH18160.1| recombination protein R [Streptococcus parasanguinis ATCC 15912]
gi|311097202|gb|EFQ55436.1| recombination protein RecR [Streptococcus parasanguinis F0405]
Length = 198
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + N ++ CSICG
Sbjct: 2 LYPAPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLNAKRELGYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D+ RD S+I+VVED D+ A+E + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDEETCEICRDETRDPSLILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLISRLMDGTVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|325680621|ref|ZP_08160163.1| recombination protein RecR [Ruminococcus albus 8]
gi|324107691|gb|EGC01965.1| recombination protein RecR [Ruminococcus albus 8]
Length = 200
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72
L + A++PG G +SA+R H+++ LA+A+ N++ V LC C N C
Sbjct: 12 LTEQFAKLPGIGMKSAQRIAYHVMEMNADEAKALADAVMNVHKTVHLCKYCQNYTDRHVC 71
Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC D +RD S++ VV+ D+ A+ER+ +YHVL G +SPL+ I P+D+ I+ L+
Sbjct: 72 PICDDNRRDHSLVCVVQSPQDITAIERTNEYKGVYHVLHGLISPLNGISPDDLKIKELLA 131
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
RI I E+I A + T++G TA+YI LK + VK+TRLA+G+P+G +L+Y D+ T++
Sbjct: 132 RINAGGIDEIIMATNPTVDGDATAYYISKLLKPLGVKVTRLAFGLPIGGQLEYADEITLY 191
Query: 193 EAIRSRTVL 201
+A+ +R +
Sbjct: 192 KALENRNEI 200
>gi|300715627|ref|YP_003740430.1| Recombination protein RecR [Erwinia billingiae Eb661]
gi|299061463|emb|CAX58577.1| Recombination protein RecR [Erwinia billingiae Eb661]
Length = 201
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + +I +VE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEICTICANPRRQQNGLICIVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPND 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEKESIQEVILATNPTVEGEATANYIAEMCGQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|251793008|ref|YP_003007734.1| recombination protein RecR [Aggregatibacter aphrophilus NJ8700]
gi|247534401|gb|ACS97647.1| recombination protein RecR [Aggregatibacter aphrophilus NJ8700]
Length = 200
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENLI+ L +PG GP+SA+R HL++ LA+++ +K+ C C
Sbjct: 3 TSPLLENLIESLRVLPGVGPKSAQRMAYHLLQHNRGGGMRLAQSLTEAMSKIGHCEHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C+IC + R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEAVCSICNNPHRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + +E+I A + T+EG TA+YI + VK++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQKVKVSRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 MVDGTTLTHSFLGRREI 199
>gi|226944095|ref|YP_002799168.1| recombination protein RecR [Azotobacter vinelandii DJ]
gi|259563687|sp|C1DEK8|RECR_AZOVD RecName: Full=Recombination protein recR
gi|226719022|gb|ACO78193.1| RecR protein [Azotobacter vinelandii DJ]
Length = 199
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R LHL+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALHLLERDRSGGLRLAQALTQALEHVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEDELCPQCADPRRDDSLLCVVQGPMDVFAIEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ R+E E+I A + T+EG+ TAHYI L DV ++R+A+G+P+G EL+
Sbjct: 122 GIPELLARVEQGAFEEVIIATNPTVEGEATAHYIAQTLASSDVTVSRIAHGVPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLSHALAGRRPI 197
>gi|333030036|ref|ZP_08458097.1| Recombination protein recR [Bacteroides coprosuis DSM 18011]
gi|332740633|gb|EGJ71115.1| Recombination protein recR [Bacteroides coprosuis DSM 18011]
Length = 205
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + + A+ + +V C
Sbjct: 1 MNQQYPSVLLEKAVDEFSKLPGIGKKTAMRLVLHLLRQDKSAVESFGNAIITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ T+ C IC + QRD S++ +VE++ D+ A+E ++ +YHVLGG +SP+D I
Sbjct: 61 QTCHNISDTESCQICSNPQRDHSLVCIVENIRDVMAIEATQQYRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ IQSLI+R++ I+E+IFA+S T+EG TT YI KL+ V ++ L+ G+ +G
Sbjct: 121 GPSDLEIQSLIDRVQAGGIKEVIFALSTTMEGDTTNFYIYRKLEKSGVDMSVLSRGVSVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +RT
Sbjct: 181 DELAYADEVTLGRSIVNRTKF 201
>gi|304395536|ref|ZP_07377419.1| recombination protein RecR [Pantoea sp. aB]
gi|304356830|gb|EFM21194.1| recombination protein RecR [Pantoea sp. aB]
Length = 201
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPAD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQKF 199
>gi|28377568|ref|NP_784460.1| recombination protein RecR [Lactobacillus plantarum WCFS1]
gi|300769762|ref|ZP_07079644.1| recombination protein R [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179720|ref|YP_003923848.1| recombination protein RecR [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|38258541|sp|Q88YP8|RECR_LACPL RecName: Full=Recombination protein recR
gi|28270400|emb|CAD63303.1| recombination protein RecR [Lactobacillus plantarum WCFS1]
gi|300492670|gb|EFK27856.1| recombination protein R [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045211|gb|ADN97754.1| recombination protein RecR [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 199
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + + A+++ + CSICGN
Sbjct: 3 YPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S ++VVE+ D+ A+E+ K N LYHVL G LSP+D GPEDI
Sbjct: 63 ITEDDPCVICKDKSRDQSTVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS++
Sbjct: 123 NIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSDIQ 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A+ R +
Sbjct: 183 YADEMTLFKAVEGRQEM 199
>gi|159900439|ref|YP_001546686.1| recombination protein RecR [Herpetosiphon aurantiacus ATCC 23779]
gi|229890153|sp|A9AUX0|RECR_HERA2 RecName: Full=Recombination protein recR
gi|159893478|gb|ABX06558.1| recombination protein RecR [Herpetosiphon aurantiacus ATCC 23779]
Length = 204
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
IT + + LI R+PG GP+SA R +L++ K + LA A+ + + C+ C
Sbjct: 8 ITPEPVAKLIDEFNRLPGIGPKSASRLVFYLLRAKREQSERLANAIMAMKDSTIFCNRCF 67
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC + R+ + VVE+ D+ ALER+ LYHVL G++SP++ I PED
Sbjct: 68 NITVEDPCTICTNANRNERQVCVVEEPLDVVALERTGEFKGLYHVLHGAISPVEGINPED 127
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ V+ I E+I + + +EG TA Y+ ++ + +++TRLA G+PMGS+L+
Sbjct: 128 LRIRELLARLRVEPIEEVILSTNPNLEGDATAAYLAREIIPLGIRVTRLARGLPMGSDLE 187
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A++ R +
Sbjct: 188 YADEVTLGRALQGRREM 204
>gi|260170498|ref|ZP_05756910.1| recombination protein RecR [Bacteroides sp. D2]
gi|315918842|ref|ZP_07915082.1| recombination protein recR [Bacteroides sp. D2]
gi|313692717|gb|EFS29552.1| recombination protein recR [Bacteroides sp. D2]
Length = 205
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C
Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSVITLKREVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPIDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G
Sbjct: 121 GPSDLQIESLVQRVTEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT+
Sbjct: 181 DELEYADEVTLGRSIVNRTLF 201
>gi|171778656|ref|ZP_02919752.1| hypothetical protein STRINF_00604 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282613|gb|EDT48037.1| hypothetical protein STRINF_00604 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 198
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC DQ RD SV++VVED D+ A+E+ + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDEDPCQICNDQTRDRSVLLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVSEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|94994663|ref|YP_602761.1| recombination protein RecR [Streptococcus pyogenes MGAS10750]
gi|94548171|gb|ABF38217.1| Recombination protein recR [Streptococcus pyogenes MGAS10750]
Length = 231
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 35 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 94
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 95 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 154
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 155 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 214
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 215 YADEVTLLRAIENRTEL 231
>gi|91974567|ref|YP_567226.1| recombination protein RecR [Rhodopseudomonas palustris BisB5]
gi|123735881|sp|Q13F14|RECR_RHOPS RecName: Full=Recombination protein recR
gi|91681023|gb|ABE37325.1| DNA replication and repair protein RecR [Rhodopseudomonas palustris
BisB5]
Length = 201
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +C
Sbjct: 1 MATAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 KSCGNIDTRNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R + E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIDALVARAHDPAVSEIILALNATVDGQTTAHYVTDLLQEAGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|50120117|ref|YP_049284.1| recombination protein RecR [Pectobacterium atrosepticum SCRI1043]
gi|73621484|sp|Q6D7Z7|RECR_ERWCT RecName: Full=Recombination protein recR
gi|49610643|emb|CAG74088.1| recombination protein [Pectobacterium atrosepticum SCRI1043]
Length = 201
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GPRSA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPRSAQRMAFQLLQRNRSGGMRLAQALTQAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + ++ VVE AD+ A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEQDVCAICSNPRRQQNGLVCVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER++V+ E+I A + T+EG TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLGRLEERLQVESFNEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRQPF 199
>gi|332637115|ref|ZP_08415978.1| recombination protein RecR [Weissella cibaria KACC 11862]
Length = 199
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R H + +E+ + A+++ + + CSICGN
Sbjct: 3 YPEPIAKLIDSYTKLPGIGIKTATRLAFHTIDMQEEDVTGFAQSLISAKRDLSFCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T PCAIC D RD S ++VVE+V DL A+E + LYHVL G LSPL GP+DI
Sbjct: 63 LTETQPCAICSDPTRDQSQVLVVEEVRDLMAIENTGEYRGLYHVLHGVLSPLSGKGPDDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SL+ R + + I+E+I A +A EG+ TA Y+ LK + ++RLA G+ +GS++D
Sbjct: 123 NIESLVTRLQKDEDIQEVIVATNANAEGEATAMYLSRLLKPAGLTVSRLATGLSVGSDID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ RT L
Sbjct: 183 YADEITLIKAVEGRTKL 199
>gi|294791168|ref|ZP_06756325.1| recombination protein RecR [Scardovia inopinata F0304]
gi|294457639|gb|EFG25993.1| recombination protein RecR [Scardovia inopinata F0304]
Length = 216
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+NLI A +PG GP+ A+R HL+ + LA+++ + KV C ICGN
Sbjct: 18 YEAAIQNLIDRFASLPGIGPKGAQRIAFHLLSISQDDAQALADSIVEMKQKVRFCEICGN 77
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V + PC IC D +RD + I +V++ D+ ++ER+ LYHVLGG++ P+ IGP+D+
Sbjct: 78 VCESSPCLICADPRRDHTTICLVQEPKDIMSIERTHEYRGLYHVLGGAIDPMSNIGPQDL 137
Query: 126 GIQSLIER---IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
I L+ R E K ++E+IFA++ IEG+ T Y+ L + + +TRLA G+PMGS+
Sbjct: 138 KIADLLNRLKTPEGKNVKEIIFALNPDIEGEATTTYLSRLLGPLGITLTRLASGLPMGSD 197
Query: 183 LDYLDDGTIFEAIRSRTV 200
L+Y D+ T+ AI R
Sbjct: 198 LEYADEITLGRAITGRRE 215
>gi|75908470|ref|YP_322766.1| recombination protein RecR [Anabaena variabilis ATCC 29413]
gi|123609556|sp|Q3MAW5|RECR_ANAVT RecName: Full=Recombination protein recR
gi|75702195|gb|ABA21871.1| DNA replication and repair protein RecR [Anabaena variabilis ATCC
29413]
Length = 185
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP++A+R LH++K+ E + LA+A+ ++ LCS+C ++ + C IC
Sbjct: 1 MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICR 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ R+ + I VV D D+ ALE+++ YHVLGG +SP+D IGPE + I L+ R+
Sbjct: 61 NPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
++ +E+I AIS ++EG+TT Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+
Sbjct: 121 QQPKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYADEITLARALE 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRREL 184
>gi|325104135|ref|YP_004273789.1| recombination protein RecR [Pedobacter saltans DSM 12145]
gi|324972983|gb|ADY51967.1| recombination protein RecR [Pedobacter saltans DSM 12145]
Length = 205
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 124/197 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN ++ +++PG G ++A R LHL+K + + ++ + + + C C
Sbjct: 2 NFSSKLLENAVEEFSKLPGVGKKTALRLVLHLLKNSSAEVHQFSNSLTTLKDNIKYCQKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC+ +RD+++I VVED D+ A+E + LYHVL G +SP+D IGP
Sbjct: 62 HNISDNNVCEICLSPKRDSTIICVVEDTRDVMAIENTHQYQGLYHVLNGLISPMDGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+SL+ERI+ +I+E+IFA+SAT+EG TT Y+ KLK ++KI+ +A GI G E+
Sbjct: 122 DLTIESLLERIKSGEIQEIIFALSATMEGDTTIFYLHKKLKDFNIKISTIARGIAFGGEI 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSIATRVP 198
>gi|326802967|ref|YP_004320785.1| recombination protein RecR [Aerococcus urinae ACS-120-V-Col10a]
gi|326651053|gb|AEA01236.1| recombination protein RecR [Aerococcus urinae ACS-120-V-Col10a]
Length = 198
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 123/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R ++ + + AEA+ + ++ CS+CGN
Sbjct: 3 YPEPIARLIDSFKKLPGIGAKTAARLAFFVLDMDQADVNDFAEALNRVKQEMTTCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V DPC IC D R+ SV++VVE+ D+ A+ER + + YHVL G LSP+D GP+D+
Sbjct: 63 VTQEDPCLICRDNDREGSVLMVVEEARDVMAMERMQNYHGKYHVLHGVLSPMDGTGPDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL++R++ +I+E+I A +AT EG+ TA Y+ +K +K++R+AYG+ +GS+++Y
Sbjct: 123 NIRSLLQRLQDTQIQEVIIATNATAEGEATATYLARLIKPAQIKVSRIAYGLSVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ R L
Sbjct: 183 ADEMTLMRALDGRQEL 198
>gi|168333589|ref|ZP_02691854.1| recombination protein RecR [Epulopiscium sp. 'N.t. morphotype B']
Length = 200
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + LI L+++PG G +SA R +++ + + LA+A+ + C
Sbjct: 1 MNNYYGSKMLS-LIGELSKLPGIGTKSASRLAFYIISMPKDKVDQLAKAIVEAKENIRYC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C V C IC D +R+ ++I+VVED D+ A E++ +YH+L G++SPL +
Sbjct: 60 EKCCTVTDDVLCPICKDDRREKNLIMVVEDSRDMAAYEKTGEYRGVYHILNGAISPLMGV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI ++ L+ RI+ +KI E+I A + IEG+ TA YI K + VK TR+A+G+P+G
Sbjct: 120 GPNDIKVKELLSRIKNEKIDEIILATNPNIEGEATAMYISKLTKPLGVKTTRIAHGVPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y+D+ T+ A++ R +
Sbjct: 180 GDLEYVDEVTLSRALQGRMEI 200
>gi|84393358|ref|ZP_00992118.1| recombination protein RecR [Vibrio splendidus 12B01]
gi|86148365|ref|ZP_01066658.1| recombination protein RecR [Vibrio sp. MED222]
gi|218708916|ref|YP_002416537.1| recombination protein RecR [Vibrio splendidus LGP32]
gi|254790791|sp|B7VL98|RECR_VIBSL RecName: Full=Recombination protein recR
gi|84376074|gb|EAP92962.1| recombination protein RecR [Vibrio splendidus 12B01]
gi|85833848|gb|EAQ52013.1| recombination protein RecR [Vibrio sp. MED222]
gi|218321935|emb|CAV17930.1| Recombination protein recR [Vibrio splendidus LGP32]
Length = 199
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C+ C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R D I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEETCHICTNPKRQDNGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + +V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRHKI 199
>gi|311694774|gb|ADP97647.1| recombination protein RecR [marine bacterium HP15]
Length = 200
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ L++ L +PG G ++A+R HL+++ L+EA++ + V C C N
Sbjct: 3 FSPLVDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGTRLSEALSQAMSGVRRCESCQN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T+ C IC + QR + VVE +DL A+E++ Y VL G LSP+D +GPE+I
Sbjct: 63 FADTEICGICENPQRRTGTLCVVESPSDLLAIEQAGDYRGGYFVLMGHLSPIDGVGPEEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI+ L++RI + + ELI A + T+EG+ TAHYI D+L G + ITRLA+GIP+G EL Y
Sbjct: 123 GIERLLKRIRDEGVTELILATNPTVEGEATAHYIADRLDGQGILITRLAHGIPVGGELGY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R R L
Sbjct: 183 VDGFTLTHAFRGRKPL 198
>gi|332529399|ref|ZP_08405360.1| recombination protein RecR [Hylemonella gracilis ATCC 19624]
gi|332041197|gb|EGI77562.1| recombination protein RecR [Hylemonella gracilis ATCC 19624]
Length = 196
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 117/193 (60%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ LI L R+PG G RSA+R HL++ + LA A+ +V C+ C
Sbjct: 4 PHSLDALIHALRRLPGVGQRSAQRMAFHLLQHDREGAQLLAGALQQAVAQVRHCARCHTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T+ CA+C D RDAS + VVE AD ALER+ A LYHVL G LSPLD IGP+DIG
Sbjct: 64 SETEICALCSDPARDASRLCVVETPADQMALERTGAYKGLYHVLMGRLSPLDGIGPKDIG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ +L+ R +RE+I A + T EG+ TAH I + +K V +TRLA G+P+GSEL+Y+
Sbjct: 124 LPALLARASDGTVREVIIATNFTGEGEATAHVIAEAMKSRGVAVTRLARGVPIGSELEYV 183
Query: 187 DDGTIFEAIRSRT 199
D GTI A+ R
Sbjct: 184 DLGTIAHALADRR 196
>gi|116622273|ref|YP_824429.1| recombination protein RecR [Candidatus Solibacter usitatus
Ellin6076]
gi|122254206|sp|Q022F6|RECR_SOLUE RecName: Full=Recombination protein recR
gi|116225435|gb|ABJ84144.1| recombination protein RecR [Candidatus Solibacter usitatus
Ellin6076]
Length = 199
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 122/196 (62%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI R+PG G +SA+R H+++ K + L++A+ ++ +K+ LC++C N
Sbjct: 4 FAEPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAVCNN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D RD SV+ VVE+ ++ +E ++ YHVL G+LSPL +GP+ +
Sbjct: 64 IADGEICQYCSDSNRDPSVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGPDML 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ERI ++RE+I A + +EG+ TA Y+ LK + VK+TR+ GIP+GS+L++
Sbjct: 124 KIKGLVERIGQGEVREVIVATNPNVEGEATAVYLARLLKPLGVKVTRIGMGIPVGSDLEF 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ TI +A+ R +
Sbjct: 184 ADEVTISKAMEGRREM 199
>gi|288928336|ref|ZP_06422183.1| recombination protein RecR [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331170|gb|EFC69754.1| recombination protein RecR [Prevotella sp. oral taxon 317 str.
F0108]
Length = 204
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+++ +E + +R+PG G ++A R LHL+K + + + + ++ + + C
Sbjct: 1 MEQQYPSALLEKAVAEFSRLPGIGRKTALRLVLHLLKTRVEDVENFSSSILKVRKDIKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ CAIC + +RDA+ I VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 61 QLCHNISDTETCAICANPRRDAATICVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP DI I SL+ER+ + E+I A+S+T+EG TT +YI K+ VK + +A GI +G
Sbjct: 121 GPNDIEINSLVERVAKGGVNEVILALSSTMEGDTTNYYISRKIAPYKVKTSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT +
Sbjct: 181 DEIEYTDEVTLGRSIINRTSI 201
>gi|148241900|ref|YP_001227057.1| recombination protein RecR [Synechococcus sp. RCC307]
gi|172047803|sp|A5GS45|RECR_SYNR3 RecName: Full=Recombination protein recR
gi|147850210|emb|CAK27704.1| Recombination protein RecR [Synechococcus sp. RCC307]
Length = 215
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ R+PG GPR+A+R LHL+++ E+ A+A+ +V C CG
Sbjct: 19 VFTRPLARLIEQFERLPGIGPRTAQRLALHLLRQPEEQSRAFADALLAARQQVGQCQRCG 78
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ C IC + +R+ VI VV D DL ALER++ + YHVLGG +SP+D IGPE
Sbjct: 79 HLSADPICDICRNPERNIGVICVVADSRDLLALERTREFSGSYHVLGGLISPMDGIGPEA 138
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GIQ L++R++ +++ E+I A++ ++EG TT+ Y+ LK ++TR+AYG+P+GSEL+
Sbjct: 139 LGIQPLLQRLDPEQVEEVILALTPSVEGDTTSLYLARLLKPF-CRVTRIAYGLPVGSELE 197
Query: 185 YLDDGTIFEAIRSRT 199
Y DD T+ A+ R
Sbjct: 198 YADDVTLARALEGRR 212
>gi|57234634|ref|YP_181325.1| recombination protein RecR [Dehalococcoides ethenogenes 195]
gi|123618834|sp|Q3Z8X4|RECR_DEHE1 RecName: Full=Recombination protein recR
gi|57225082|gb|AAW40139.1| recombination protein RecR [Dehalococcoides ethenogenes 195]
Length = 204
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 116/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + LI L ++PG GP+SA+R +L++ E+ + L++ + +I N++ C IC N
Sbjct: 9 TAGAVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEEQVLTLSDTIRSIKNQISQCRICFN 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V ++ C IC + +R+A+ I VVE D+ ALE YHVL G++SP + I ++I
Sbjct: 69 VADSELCPICQNTKREANKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNI 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y
Sbjct: 129 RINELMSRLNDGQVDEVILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEY 188
Query: 186 LDDGTIFEAIRSRTVL 201
DD T+ A+ R
Sbjct: 189 ADDVTLSRAMEGRQNF 204
>gi|262279000|ref|ZP_06056785.1| recombination protein RecR [Acinetobacter calcoaceticus RUH2202]
gi|262259351|gb|EEY78084.1| recombination protein RecR [Acinetobacter calcoaceticus RUH2202]
Length = 198
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C
Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC +R+ ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTENEICDICASTEREDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ LI+R+ I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+
Sbjct: 121 IGVPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|194290030|ref|YP_002005937.1| recombination protein recr [Cupriavidus taiwanensis LMG 19424]
gi|229890147|sp|B3R1M6|RECR_CUPTR RecName: Full=Recombination protein recR
gi|193223865|emb|CAQ69874.1| Recombination protein recR [Cupriavidus taiwanensis LMG 19424]
Length = 204
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 113/203 (55%), Gaps = 4/203 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K + ++ L++ L +PG GP+SA+R HL++ + L +A+ + + C
Sbjct: 2 KASSPTSLQALVEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCQR 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP
Sbjct: 62 CNTFTEQEICETCLDDRRDASVLCVVETPADQVMIEQTLTYRGKYFVLMGRLSPLDGIGP 121
Query: 123 EDIGIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
+I + L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P
Sbjct: 122 REIHLDRLLARATEPELGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G EL+Y+D GTI A+ R L
Sbjct: 182 VGGELEYVDAGTIARAVMDRRNL 204
>gi|256846789|ref|ZP_05552244.1| recombination protein RecR [Fusobacterium sp. 3_1_36A2]
gi|256717755|gb|EEU31313.1| recombination protein RecR [Fusobacterium sp. 3_1_36A2]
Length = 197
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C+IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCSICSDNARNHNIICVVEESRDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|238853619|ref|ZP_04643988.1| recombination protein RecR [Lactobacillus gasseri 202-4]
gi|238833763|gb|EEQ26031.1| recombination protein RecR [Lactobacillus gasseri 202-4]
Length = 199
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + E + ++++ + + CSICGN
Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I
Sbjct: 63 ITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R++ + +++E+I A++++ EG+ TA Y+ +K +K+T LA G+ +GS+++
Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTHLAAGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ RT L
Sbjct: 183 YANSITLKRAVQGRTDL 199
>gi|294785975|ref|ZP_06751262.1| recombination protein RecR [Fusobacterium sp. 3_1_27]
gi|294486312|gb|EFG33675.1| recombination protein RecR [Fusobacterium sp. 3_1_27]
Length = 197
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 115/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCSICSDNIRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|86747792|ref|YP_484288.1| recombination protein RecR [Rhodopseudomonas palustris HaA2]
gi|123099182|sp|Q2J2D3|RECR_RHOP2 RecName: Full=Recombination protein recR
gi|86570820|gb|ABD05377.1| DNA replication and repair protein RecR [Rhodopseudomonas palustris
HaA2]
Length = 201
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +C
Sbjct: 1 MAIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 KTCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R + E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G
Sbjct: 121 GPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|262370489|ref|ZP_06063815.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046]
gi|262314831|gb|EEY95872.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046]
Length = 198
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 125/194 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C
Sbjct: 1 MFSDRFDQLVQALRILPSVGPKSAQRMALHLIMKNREGAVGLAHALNEATSYIHECSLCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C ICI +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD +GPE+
Sbjct: 61 SLTENEVCDICISHERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGVGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI LI+R+ K+ E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+
Sbjct: 121 IGIPYLIQRLGDGKVTEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|313203551|ref|YP_004042208.1| DNA replication and repair protein recr [Paludibacter
propionicigenes WB4]
gi|312442867|gb|ADQ79223.1| DNA replication and repair protein RecR [Paludibacter
propionicigenes WB4]
Length = 207
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 128/199 (64%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +EN + A++PG G ++A R LHL+K+ E + +A + +++ C++
Sbjct: 4 QQFSSSLLENAVNEFAKLPGIGRKTALRLVLHLLKQSEYEVEVFGKAFIQLRSEIQYCTV 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ T+ C IC + RD + VVE++ D+ ++E ++ LYHVLGG +SP+D +GP
Sbjct: 64 CHNISDTEICQICSNPSRDHETVCVVENIKDVMSIENTQQFRGLYHVLGGIISPMDGVGP 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+D+ I+SLIER++ + ++E+I A+S T+EG TT YI KL +++KIT +A GI +G E
Sbjct: 124 KDLEIESLIERVQTENVKEVILALSTTMEGDTTNFYIFRKLAPLNIKITTIARGIAIGDE 183
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +R
Sbjct: 184 LEYADEVTLGRSILNRVEF 202
>gi|195977777|ref|YP_002123021.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225868924|ref|YP_002744872.1| recombination protein RecR [Streptococcus equi subsp.
zooepidemicus]
gi|238689805|sp|B4U1Z1|RECR_STREM RecName: Full=Recombination protein recR
gi|259563706|sp|C0MCW0|RECR_STRS7 RecName: Full=Recombination protein recR
gi|195974482|gb|ACG62008.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225702200|emb|CAW99924.1| recombination protein RecR [Streptococcus equi subsp.
zooepidemicus]
Length = 198
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG
Sbjct: 2 LYPIPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D RD I+VVE D+ A+E+ + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCHICTDSSRDKETILVVEASKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ + E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMAGEATEVIVATNATADGEATAMYISRILKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|238855361|ref|ZP_04645673.1| recombination protein RecR [Lactobacillus jensenii 269-3]
gi|260664923|ref|ZP_05865774.1| recombination protein RecR [Lactobacillus jensenii SJ-7A-US]
gi|282934591|ref|ZP_06339838.1| recombination protein RecR [Lactobacillus jensenii 208-1]
gi|313472531|ref|ZP_07813021.1| recombination protein RecR [Lactobacillus jensenii 1153]
gi|238832022|gb|EEQ24347.1| recombination protein RecR [Lactobacillus jensenii 269-3]
gi|239529965|gb|EEQ68966.1| recombination protein RecR [Lactobacillus jensenii 1153]
gi|260561406|gb|EEX27379.1| recombination protein RecR [Lactobacillus jensenii SJ-7A-US]
gi|281301343|gb|EFA93640.1| recombination protein RecR [Lactobacillus jensenii 208-1]
Length = 199
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ ++PG G ++A R + + E + ++A+ ++ + CSICGN
Sbjct: 3 YPLPIARLIESYMKLPGIGEKTATRLAFYTLDMPEDDVEQFSQALKDVKTLLHQCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D RD S ++VVE D+ A E + +YHVL G LSP++ IGPEDI
Sbjct: 63 ITETDPCQICRDSNRDHSTVMVVEQPKDVMAFEEMGEYDGMYHVLHGVLSPMEGIGPEDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R + I+E+I A+++T EG++TA YI LK +K+TRLA G+ +G++++
Sbjct: 123 NIKSLITRLQKDDDIKEIIIALNSTPEGESTAMYIAKLLKPAGLKVTRLASGLAVGTDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRINL 199
>gi|153833889|ref|ZP_01986556.1| recombination protein RecR [Vibrio harveyi HY01]
gi|269962149|ref|ZP_06176503.1| recombination protein RecR [Vibrio harveyi 1DA3]
gi|148869831|gb|EDL68805.1| recombination protein RecR [Vibrio harveyi HY01]
gi|269833233|gb|EEZ87338.1| recombination protein RecR [Vibrio harveyi 1DA3]
Length = 199
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRHKI 199
>gi|238919042|ref|YP_002932556.1| recombination protein RecR, [Edwardsiella ictaluri 93-146]
gi|259563695|sp|C5BD00|RECR_EDWI9 RecName: Full=Recombination protein recR
gi|238868610|gb|ACR68321.1| recombination protein RecR, putative [Edwardsiella ictaluri 93-146]
Length = 201
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|15641069|ref|NP_230701.1| recombination protein RecR [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587092|ref|ZP_01676869.1| recombination protein RecR [Vibrio cholerae 2740-80]
gi|121726247|ref|ZP_01679537.1| recombination protein RecR [Vibrio cholerae V52]
gi|147673522|ref|YP_001216524.1| recombination protein RecR [Vibrio cholerae O395]
gi|153217695|ref|ZP_01951376.1| recombination protein RecR [Vibrio cholerae 1587]
gi|153824935|ref|ZP_01977602.1| recombination protein RecR [Vibrio cholerae MZO-2]
gi|153828163|ref|ZP_01980830.1| recombination protein RecR [Vibrio cholerae 623-39]
gi|227081229|ref|YP_002809780.1| recombination protein RecR [Vibrio cholerae M66-2]
gi|229505349|ref|ZP_04394859.1| recombination protein RecR [Vibrio cholerae BX 330286]
gi|229510981|ref|ZP_04400460.1| recombination protein RecR [Vibrio cholerae B33]
gi|229515438|ref|ZP_04404897.1| recombination protein RecR [Vibrio cholerae TMA 21]
gi|229518102|ref|ZP_04407546.1| recombination protein RecR [Vibrio cholerae RC9]
gi|229523157|ref|ZP_04412564.1| recombination protein RecR [Vibrio cholerae TM 11079-80]
gi|229525665|ref|ZP_04415070.1| recombination protein RecR [Vibrio cholerae bv. albensis VL426]
gi|229608368|ref|YP_002879016.1| recombination protein RecR [Vibrio cholerae MJ-1236]
gi|254848185|ref|ZP_05237535.1| recombination protein recR [Vibrio cholerae MO10]
gi|297578660|ref|ZP_06940588.1| recombination protein recR [Vibrio cholerae RC385]
gi|298498836|ref|ZP_07008643.1| recombination protein RecR [Vibrio cholerae MAK 757]
gi|20139783|sp|Q9KT49|RECR_VIBCH RecName: Full=Recombination protein recR
gi|172047407|sp|A5F2N5|RECR_VIBC3 RecName: Full=Recombination protein recR
gi|254790797|sp|C3LTV3|RECR_VIBCM RecName: Full=Recombination protein recR
gi|9655522|gb|AAF94215.1| recombination protein RecR [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121548727|gb|EAX58776.1| recombination protein RecR [Vibrio cholerae 2740-80]
gi|121631193|gb|EAX63566.1| recombination protein RecR [Vibrio cholerae V52]
gi|124113358|gb|EAY32178.1| recombination protein RecR [Vibrio cholerae 1587]
gi|146315405|gb|ABQ19944.1| recombination protein RecR [Vibrio cholerae O395]
gi|148876405|gb|EDL74540.1| recombination protein RecR [Vibrio cholerae 623-39]
gi|149741447|gb|EDM55477.1| recombination protein RecR [Vibrio cholerae MZO-2]
gi|227009117|gb|ACP05329.1| recombination protein RecR [Vibrio cholerae M66-2]
gi|227012872|gb|ACP09082.1| recombination protein RecR [Vibrio cholerae O395]
gi|229339246|gb|EEO04263.1| recombination protein RecR [Vibrio cholerae bv. albensis VL426]
gi|229339520|gb|EEO04535.1| recombination protein RecR [Vibrio cholerae TM 11079-80]
gi|229344817|gb|EEO09791.1| recombination protein RecR [Vibrio cholerae RC9]
gi|229347207|gb|EEO12167.1| recombination protein RecR [Vibrio cholerae TMA 21]
gi|229350946|gb|EEO15887.1| recombination protein RecR [Vibrio cholerae B33]
gi|229357572|gb|EEO22489.1| recombination protein RecR [Vibrio cholerae BX 330286]
gi|229371023|gb|ACQ61446.1| recombination protein RecR [Vibrio cholerae MJ-1236]
gi|254843890|gb|EET22304.1| recombination protein recR [Vibrio cholerae MO10]
gi|297536254|gb|EFH75087.1| recombination protein recR [Vibrio cholerae RC385]
gi|297543169|gb|EFH79219.1| recombination protein RecR [Vibrio cholerae MAK 757]
Length = 200
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDTLDYRLQRGDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRHKL 199
>gi|293392501|ref|ZP_06636821.1| recombination protein R [Serratia odorifera DSM 4582]
gi|291424903|gb|EFE98112.1| recombination protein R [Serratia odorifera DSM 4582]
Length = 201
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEQESISEVILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHAI 199
>gi|270307945|ref|YP_003330003.1| recombination protein [Dehalococcoides sp. VS]
gi|270153837|gb|ACZ61675.1| recombination protein [Dehalococcoides sp. VS]
Length = 204
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 116/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + LI L ++PG GP+SA+R +L++ E+ + L++ + +I N++ C IC N
Sbjct: 9 TAGAVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEEQVLALSDTIRSIKNQISQCRICFN 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V ++ C IC + +R+ + I VVE D+ ALE YHVL G++SP + I ++I
Sbjct: 69 VADSELCPICQNTKRETNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNI 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R++ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y
Sbjct: 129 RISELMSRLDNGQVDEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEY 188
Query: 186 LDDGTIFEAIRSRTVL 201
DD T+ A+ R
Sbjct: 189 ADDVTLSRAMEGRQNF 204
>gi|160887705|ref|ZP_02068708.1| hypothetical protein BACUNI_00106 [Bacteroides uniformis ATCC 8492]
gi|317478909|ref|ZP_07938056.1| recombination protein RecR [Bacteroides sp. 4_1_36]
gi|156862836|gb|EDO56267.1| hypothetical protein BACUNI_00106 [Bacteroides uniformis ATCC 8492]
gi|316904886|gb|EFV26693.1| recombination protein RecR [Bacteroides sp. 4_1_36]
Length = 205
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSTLLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC QRDASV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCRICSSPQRDASVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVRRVAAGGINEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIVNRTPF 201
>gi|152996551|ref|YP_001341386.1| recombination protein RecR [Marinomonas sp. MWYL1]
gi|150837475|gb|ABR71451.1| recombination protein RecR [Marinomonas sp. MWYL1]
Length = 197
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ LI+ L +PG GPRSA++ L+L+++ Q LA A+ +KV CS C
Sbjct: 1 MFSPLIKELIESLRCLPGVGPRSAQKMALYLLERDHQGADRLANALREALDKVGRCSSCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC D +RDA + +VE AD+ A+E + + + Y VL G LSP+D IGPE+
Sbjct: 61 TLTEESECGICTDPERDAKHLCIVETPADVVAIESAGSFSGRYFVLLGHLSPIDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ++ ++ E I A ++T+EG+ T HYI +KLK +++ ++R+A+G+PMG EL+
Sbjct: 121 LGLDRLEALVQHNEVEEAIIATNSTVEGEATCHYIAEKLKTLNINVSRIAHGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A+ R L
Sbjct: 181 YVDGNTLALALEGRKKL 197
>gi|293374917|ref|ZP_06621215.1| recombination protein RecR [Turicibacter sanguinis PC909]
gi|325844363|ref|ZP_08168118.1| recombination protein RecR [Turicibacter sp. HGF1]
gi|292646466|gb|EFF64478.1| recombination protein RecR [Turicibacter sanguinis PC909]
gi|325489168|gb|EGC91551.1| recombination protein RecR [Turicibacter sp. HGF1]
Length = 200
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 86/197 (43%), Positives = 128/197 (64%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVK-KKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ L+++PG G ++A R +++ KE + A+A+ + ++ C ICG
Sbjct: 3 YPQPITKLIESLSKLPGIGNKTAERLAFYVISSMKEDDVTTFAKALIDSKRQLFKCPICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ TDPC+IC D RD S+I VV+D D+ A+ER + LYHVL G LSPLD +GPED
Sbjct: 63 HITDTDPCSICSDSHRDRSLIAVVQDPKDVIAIERMRGFKGLYHVLNGVLSPLDGMGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI +LIER++ + ++ELI A+SAT+EG T+ YI LK DVK+TR+A G+ MG ++
Sbjct: 123 IGIPALIERLKDENVKELILALSATLEGDATSQYIAKLLKNTDVKVTRIARGLEMGRSIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 183 YADEVTLIRALEGRREL 199
>gi|304440575|ref|ZP_07400461.1| recombination protein R [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370951|gb|EFM24571.1| recombination protein R [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 196
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 120/194 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +ENLI L ++PG G +SA R +++++ ++ LA+A+ + + CSIC N
Sbjct: 2 SRPLENLIYELTKLPGVGDKSAERILYYILEQDKEEARGLAKAIVDAAENIEECSICHNF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC IC D+ RD + I VVE D+ ++E++ + + LYHVL G++ P I P D+
Sbjct: 62 TDDDPCDICTDESRDRTTICVVERPRDVASMEKTNSYHGLYHVLHGTVQPTRGIFPSDLR 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SL++R++ I+E+I A + T +G TTA YI + LK V +TR+A+GIP+G L+Y
Sbjct: 122 FASLVKRVKDGGIKEVIIATNPTTDGDTTAMYIQEALKDTGVLMTRIAHGIPVGGNLEYY 181
Query: 187 DDGTIFEAIRSRTV 200
D+ TI A+++R
Sbjct: 182 DELTIETALKNRVS 195
>gi|24379076|ref|NP_721031.1| recombination protein RecR [Streptococcus mutans UA159]
gi|73621519|sp|Q8DV99|RECR_STRMU RecName: Full=Recombination protein recR
gi|24376974|gb|AAN58337.1|AE014903_13 putative recombination protein RecM [Streptococcus mutans UA159]
Length = 199
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ ++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD S ++VVED D+ A+E+ + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDDDPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I ++SL+ R+ I E+I A +AT +G+ TA YI LK + +TRLA G+ +GS++
Sbjct: 122 INLKSLLTRLRDNSDIHEVIIATNATADGEATAMYISRVLKPAGITVTRLARGLAVGSDI 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ AI +RT L
Sbjct: 182 EYADEVTLLRAIENRTEL 199
>gi|194336273|ref|YP_002018067.1| recombination protein RecR [Pelodictyon phaeoclathratiforme BU-1]
gi|229470331|sp|B4SGN7|RECR_PELPB RecName: Full=Recombination protein recR
gi|194308750|gb|ACF43450.1| recombination protein RecR [Pelodictyon phaeoclathratiforme BU-1]
Length = 204
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T +E+LI A++PG G ++A+R ++++++ LAEA+ + V CS+C
Sbjct: 2 RYTSAALESLIDEFAKLPGVGRKTAQRLAMYILREPRAEAERLAEALLEAKDNVIRCSVC 61
Query: 64 GNVDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
N+ DPCA+C + RD SVI VVE D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNITDVGVDPCALCTSKARDRSVICVVESPVDMLAFEKTGHYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIER---IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ R + +RE++ A++ TIEG+TTA Y+ LK + + +T++A GIP
Sbjct: 122 PDDIKVRELLLRFTMPQSPAVREVVLALNPTIEGETTALYLSKLLKPLGIHVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTV 200
+G+EL+++D+ T+ A+ RTV
Sbjct: 182 VGAELEFIDEATLSRAMEGRTV 203
>gi|297572177|ref|YP_003697951.1| recombination protein RecR [Arcanobacterium haemolyticum DSM 20595]
gi|296932524|gb|ADH93332.1| recombination protein RecR [Arcanobacterium haemolyticum DSM 20595]
Length = 208
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 119/193 (61%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+++LI L R+PG GP+SA+R HL++ + + L EA+ + KV C++CGN+
Sbjct: 8 AVQSLIDELGRLPGVGPKSAQRIAFHLLEADDDEVNHLVEALQAVKAKVQFCTVCGNIAE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC D +R S I VVE+ D+ A+ERS+ YHVLGG++ P+ +GP+++ I+
Sbjct: 68 GDLCRICADLRRVESTICVVEEAKDIVAIERSREYRGKYHVLGGAIDPIGGVGPDNLRIR 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ + E+I A+ +EG+ TA Y+ L + V ++RLA G+P+G +L+Y D+
Sbjct: 128 ELYARLQDGTVEEVILAMDPNVEGEATATYLAINLAHMGVVVSRLASGLPVGGDLEYADE 187
Query: 189 GTIFEAIRSRTVL 201
TI A+ R +
Sbjct: 188 VTISRALEGRQRI 200
>gi|86610315|ref|YP_479077.1| recombination protein RecR [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500273|sp|Q2JH53|RECR_SYNJB RecName: Full=Recombination protein recR
gi|86558857|gb|ABD03814.1| recombination protein RecR [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 199
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L R+PG G ++A+R LHL+ + + LA+A+ V CSIC
Sbjct: 1 MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICF 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DPC IC QRD S+ VV DV DL A+ER++ LYHVLGG +SP++ IG +
Sbjct: 61 NWSAEDPCEICRSPQRDPSLWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSE 182
+ I+ L+ R+ +K +ELIFAIS ++EG+ T H + D LK +++TRLA+G+PMGSE
Sbjct: 121 LHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLKPVAPTLRMTRLAFGLPMGSE 180
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ A+ +R L
Sbjct: 181 LEYADEVTLARALEARQEL 199
>gi|315180752|gb|ADT87666.1| Recombinational DNA repair protein [Vibrio furnissii NCTC 11218]
Length = 194
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMVEIGHCSECRTFTEE 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP DIG+
Sbjct: 62 EVCHICQNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ I E+I A + T+EG+ TAHYI + + DV +R+A+G+P+G EL+ +D
Sbjct: 122 VLDFRLQRGGISEVILATNPTVEGEATAHYIAELCREHDVSASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 182 TTLSHSLLGRQKL 194
>gi|325283369|ref|YP_004255910.1| Recombination protein recR [Deinococcus proteolyticus MRP]
gi|324315178|gb|ADY26293.1| Recombination protein recR [Deinococcus proteolyticus MRP]
Length = 198
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L+R+PG GP+SA+R HL ++ + + L+ A+ +++ C +C N
Sbjct: 3 YPPSLVALIRELSRLPGIGPKSAQRLAFHLFEQPAEDIERLSAALLAAKSELHTCPVCFN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD ++I VVE+ D+ ALERS LYHVL G LSP++ +GPE +
Sbjct: 63 ITDAELCDVCSDPSRDQNLICVVEEPGDVIALERSGEYQGLYHVLHGVLSPMNGVGPEQL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L+ R E+I A T+EG TA Y+ L+ + +++R+AYG+ +GS L+Y
Sbjct: 123 HIKELLPRAREG--LEVILATGTTVEGDATALYLQRLLEPLGAEVSRIAYGLQVGSALEY 180
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ R +
Sbjct: 181 ADEVTLGRALLGRQKI 196
>gi|296328102|ref|ZP_06870635.1| recombination protein R [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154773|gb|EFG95557.1| recombination protein R [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 197
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 114/197 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKKNVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C IC D RD +I VVE+ D+ LER+ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCHICSDNARDHRIICVVEESKDIMILERTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRIEI 197
>gi|319441765|ref|ZP_07990921.1| recombination protein RecR [Corynebacterium variabile DSM 44702]
Length = 214
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 16/213 (7%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++++I +R+PG GP+SA+R HL++ + + LA A+ + V C IC
Sbjct: 1 MFEGPLQDVIDEFSRLPGVGPKSAQRIAFHLLQAEPTDVERLAGALTRLQQGVHFCRICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + D C IC D RDA+++ VVE+ D+ +ER+ YHVLGG+L PL+ IGP++
Sbjct: 61 NISSEDVCRICADSSRDATLVCVVEESKDIQVIERTGEYKGRYHVLGGALDPLNGIGPKE 120
Query: 125 IGIQSLIER---------------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168
+ + +L++R + I E+I A EG+ TA Y+ LK +
Sbjct: 121 LNVTALVQRIGGRVDDVPAADGTLPDAPDISEVIIATDPNTEGEATASYLGRLLKDFPGL 180
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++RLA GIPMG +L+++D+ T+ A RT L
Sbjct: 181 TVSRLASGIPMGGDLEFVDELTLSRAFEGRTPL 213
>gi|219666122|ref|YP_002456557.1| recombination protein RecR [Desulfitobacterium hafniense DCB-2]
gi|254790765|sp|B8FY16|RECR_DESHD RecName: Full=Recombination protein recR
gi|219536382|gb|ACL18121.1| recombination protein RecR [Desulfitobacterium hafniense DCB-2]
Length = 198
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +LI L+R+PG GP++A R +L+++ Q+ LAEAM ++ C
Sbjct: 1 MDFLNYPEPLADLITGLSRLPGIGPKTAGRLAFYLLQQP-QVAENLAEAMIRAQREIRQC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C N DPC IC ++R+ +++ +VE D+ +LE+++ LYHVL G +SPL+ +
Sbjct: 60 SLCCNYTDHDPCPICTGEKRERTLLCIVEQPRDVVSLEKTREFKGLYHVLHGVISPLEGV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I L+ R+ + ++E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G
Sbjct: 120 GPEQLTISKLLGRL--EGVQEVVMAMNPTVEGEATALYLSRLLKPLGIKVTRIAHGLPVG 177
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ TI A+ R +
Sbjct: 178 GDLEYADEITIARALEGRRQI 198
>gi|322389126|ref|ZP_08062689.1| recombination protein R [Streptococcus parasanguinis ATCC 903]
gi|321144168|gb|EFX39583.1| recombination protein R [Streptococcus parasanguinis ATCC 903]
Length = 198
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + N ++ CSICG
Sbjct: 2 LYPAPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLNAKRELGYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D+ RD S+I+VVED D+ A+E + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDEETCEICRDETRDPSLILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++
Sbjct: 122 INLKTLISRLMDGTVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|309810105|ref|ZP_07703951.1| recombination protein RecR [Lactobacillus iners SPIN 2503V10-D]
gi|308169604|gb|EFO71651.1| recombination protein RecR [Lactobacillus iners SPIN 2503V10-D]
Length = 199
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN
Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I
Sbjct: 63 ITDTDPCEICSNPNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++
Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRISL 199
>gi|300024233|ref|YP_003756844.1| recombination protein RecR [Hyphomicrobium denitrificans ATCC
51888]
gi|299526054|gb|ADJ24523.1| recombination protein RecR [Hyphomicrobium denitrificans ATCC
51888]
Length = 201
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 106/201 (52%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +KI G EIE L+++L+R+PG GPRSAR+A L L+K++ LL PL++A+ K+ C
Sbjct: 1 MSRKIAGPEIERLVQLLSRLPGLGPRSARKAVLSLLKRRNDLLLPLSDALQQAVEKISEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+DT PC++C D +RD S+I+VVE+V DLWALER+ V+A YHVLGG LSPLD I
Sbjct: 61 PVCGNLDTVSPCSVCSDPRRDQSLIVVVEEVGDLWALERANIVSARYHVLGGHLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + + +L+ R +++E++ A++AT+EGQ+TAHYI D+L DV ++RLA G+P+G
Sbjct: 121 GPEQLNVANLLARAAASEVKEILLALNATVEGQSTAHYISDQLAATDVTVSRLAQGVPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A ++R L
Sbjct: 181 GELDYLDDGTLAAAFKARRKL 201
>gi|113461451|ref|YP_719520.1| recombination protein RecR [Haemophilus somnus 129PT]
gi|123132215|sp|Q0I4S5|RECR_HAES1 RecName: Full=Recombination protein recR
gi|112823494|gb|ABI25583.1| DNA replication and repair protein RecR [Haemophilus somnus 129PT]
Length = 201
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C
Sbjct: 3 SSPLLENLIEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLAGALTEAMSKIGHCTHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R S + VVE +D+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTEEESCAICNNPRRQNSGFLCVVEQPSDIPAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R++ + E+I A + T+EG+ TA+YI + ++K++R+A+GIP+G EL+
Sbjct: 123 IGLDLLQKRLQHESFYEVILATNPTVEGEATANYIAEMCFQHNIKVSRIAHGIPIGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 TVDGTTLSHSLIGRREI 199
>gi|317970378|ref|ZP_07971768.1| DNA replication and repair protein RecR [Synechococcus sp. CB0205]
Length = 228
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI R+PG GPR+A+R LHL+ + + + A+A+ ++V C C +
Sbjct: 33 FTRPLARLIDQFERLPGIGPRTAQRLALHLLNQPSEQIQAFADALLAARSQVGQCQRCFH 92
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC +++R V+ VV D DL ALER++ YHVLGG +SP+D IGPE +
Sbjct: 93 LSADPLCEICRNEERSTGVLCVVADSRDLLALERTREFKGSYHVLGGLISPMDGIGPELL 152
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
IQ L+ER++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y
Sbjct: 153 HIQPLVERVDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEY 211
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ R +
Sbjct: 212 ADEVTLARALEGRRRM 227
>gi|156934944|ref|YP_001438860.1| recombination protein RecR [Cronobacter sakazakii ATCC BAA-894]
gi|166221938|sp|A7MJW5|RECR_ENTS8 RecName: Full=Recombination protein recR
gi|156533198|gb|ABU78024.1| hypothetical protein ESA_02794 [Cronobacter sakazakii ATCC BAA-894]
Length = 201
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEKCNICTNPRRQENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAAEPLKEIILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKM 199
>gi|315925751|ref|ZP_07921958.1| recombination protein R [Pseudoramibacter alactolyticus ATCC 23263]
gi|315620860|gb|EFV00834.1| recombination protein R [Pseudoramibacter alactolyticus ATCC 23263]
Length = 200
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E L+ L+++PG G ++A+R HL+ ++ + L+ A+ ++ K+ LC +C
Sbjct: 3 LYPKAVERLVAELSKLPGIGEKTAQRLAFHLIDAPKEDIAGLSRALLDVKEKIKLCPVCF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ D C IC D RD SV+ VVE+ D++A+ER++ + LYHVL G +SPL+ IGP+D
Sbjct: 63 SITDGDRCDICADASRDRSVLCVVENTRDIYAIERTREYHGLYHVLHGVISPLEGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + L+ R+ + E+I A + T EG+ TA Y+ + + + V +TRLA GIP+G++++
Sbjct: 123 IKARELMLRLADGTVTEVIMATNPTPEGEATAVYLGNLITPMGVTVTRLAKGIPIGADVE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D+ T+ +A R +
Sbjct: 183 FTDEVTLIKAFEGRKQI 199
>gi|332883359|gb|EGK03642.1| recombination protein recR [Dysgonomonas mossii DSM 22836]
Length = 207
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 129/201 (64%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + A++PG G ++A R LHL+++ ++ A+A+ ++ ++V C
Sbjct: 1 MNQKYPSALLENAVNEFAKLPGIGRKTALRLILHLLRQDNAMVEGFAQALVSLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C N+ D C IC+D+ RDA+ I VVE++ ++ A+E + LYHVLGG +SP+D I
Sbjct: 61 NVCHNICDDDICPICLDKSRDAATICVVENIKEVMAIENTMQFKGLYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++E+I A+S T+EG TT YI KL D+K++ +A GI +G
Sbjct: 121 GPSDLEIDSLVTRVAKGDVKEIILALSTTMEGDTTNFYIYKKLSSFDIKVSMIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT+
Sbjct: 181 DEIEYADEVTLGRSILNRTLF 201
>gi|304393794|ref|ZP_07375719.1| recombination protein RecR [Ahrensia sp. R2A130]
gi|303293993|gb|EFL88368.1| recombination protein RecR [Ahrensia sp. R2A130]
Length = 209
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+G+EI+ LI++LAR+PG GPRSARRA LHL+K+K+ L+ PLA A+ + KV CS CGN
Sbjct: 13 SGQEIDRLIQLLARLPGLGPRSARRAALHLIKRKDALMSPLASAINDAVEKVGECSTCGN 72
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAV-NALYHVLGGSLSPLDRIGPED 124
+DT++PCA+C D +RD S IIVVEDV+DLWALER+ + NA YHVLGG LSPLD IGPED
Sbjct: 73 IDTSNPCALCRDPRRDGSTIIVVEDVSDLWALERAAVMNNAKYHVLGGVLSPLDGIGPED 132
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ER+ + EL+ A++AT+EGQTTAHYI D+L+G++V I+RLA+G+P+G ELD
Sbjct: 133 LSISQLVERVSSGAVSELVIAVNATVEGQTTAHYITDQLRGMEVNISRLAHGVPVGGELD 192
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R+RT
Sbjct: 193 YLDEGTLSAAMRARTKF 209
>gi|261252408|ref|ZP_05944981.1| recombination protein RecR [Vibrio orientalis CIP 102891]
gi|260935799|gb|EEX91788.1| recombination protein RecR [Vibrio orientalis CIP 102891]
Length = 200
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQMCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCREHQVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRQKL 199
>gi|75674565|ref|YP_316986.1| recombination protein RecR [Nitrobacter winogradskyi Nb-255]
gi|123614211|sp|Q3SVQ7|RECR_NITWN RecName: Full=Recombination protein recR
gi|74419435|gb|ABA03634.1| RecR protein [Nitrobacter winogradskyi Nb-255]
Length = 201
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +TG EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C
Sbjct: 1 MPTAVTGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIDRIRVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT PC IC D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 ETCGNIDTRSPCTICTDARRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVARAHDPRVAEIVLALNATVDGQTTAHYITDLLGEANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|291616584|ref|YP_003519326.1| RecR [Pantoea ananatis LMG 20103]
gi|291151614|gb|ADD76198.1| RecR [Pantoea ananatis LMG 20103]
gi|327393014|dbj|BAK10436.1| recombination protein RecR [Pantoea ananatis AJ13355]
Length = 201
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPAD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + + E+I A + T+EG+ TA+YI + V +R+A+G+PMG EL+
Sbjct: 123 IGLDRLEQRLENETLHEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPMGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRQKI 199
>gi|91223618|ref|ZP_01258883.1| recombination protein RecR [Vibrio alginolyticus 12G01]
gi|269966014|ref|ZP_06180106.1| recombination protein RecR [Vibrio alginolyticus 40B]
gi|91191704|gb|EAS77968.1| recombination protein RecR [Vibrio alginolyticus 12G01]
gi|269829410|gb|EEZ83652.1| recombination protein RecR [Vibrio alginolyticus 40B]
Length = 199
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCKEHQVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRHRI 199
>gi|56460947|ref|YP_156228.1| recombinational DNA repair protein [Idiomarina loihiensis L2TR]
gi|73621491|sp|Q5QWR1|RECR_IDILO RecName: Full=Recombination protein recR
gi|56179957|gb|AAV82679.1| Recombinational DNA repair protein [Idiomarina loihiensis L2TR]
Length = 201
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I+ L++ L R+PG G +SA+R HL+++ LAE++ + KV C C +
Sbjct: 4 SPAIDQLVENLKRLPGVGQKSAQRMAFHLLERDRGGASRLAESLQSAVEKVGHCECCRTL 63
Query: 67 DTTDPCAICIDQ-QRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C IC + +R+ V+ +VE AD+ A+E++ Y VL G LSPLD IGP DI
Sbjct: 64 TEEPLCRICSNPMRRENGVLCIVETPADVLAIEQTSQFQGRYFVLMGHLSPLDGIGPADI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +++ + + E++ A + T+EG TAHYI D +++ TR+A+G+P+G EL Y
Sbjct: 124 GLDELERQLQSEPVEEIVLATNPTVEGDATAHYIADIAAQLNINTTRIAHGVPVGGELGY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R
Sbjct: 184 VDQTTLGHAFSGRKQF 199
>gi|19703754|ref|NP_603316.1| recombination protein recR [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|24212188|sp|Q8RG96|RECR_FUSNN RecName: Full=Recombination protein recR
gi|19713888|gb|AAL94615.1| Recombination protein recR [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 197
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 114/197 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C +CG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCNICSDNARDHRIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRIEI 197
>gi|270294151|ref|ZP_06200353.1| recombination protein RecR [Bacteroides sp. D20]
gi|270275618|gb|EFA21478.1| recombination protein RecR [Bacteroides sp. D20]
Length = 205
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C
Sbjct: 1 MNGQFPSTLLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC QRDASV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 KVCHNISDTETCCICSSPQRDASVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL++R+ I E+I A+S T+EG TT YI KL+ + VK++ +A GI +G
Sbjct: 121 GPGDLQIESLVQRVAAGGINEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSIVNRTPF 201
>gi|241662734|ref|YP_002981094.1| recombination protein RecR [Ralstonia pickettii 12D]
gi|240864761|gb|ACS62422.1| recombination protein RecR [Ralstonia pickettii 12D]
Length = 206
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LA+A++ + CS C
Sbjct: 7 TPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQDICETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K TRLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|322385092|ref|ZP_08058739.1| recombination protein R [Streptococcus cristatus ATCC 51100]
gi|321270716|gb|EFX53629.1| recombination protein R [Streptococcus cristatus ATCC 51100]
Length = 198
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC DQ RD +VI++VED D+ A+E + + LYHVL G +SP++ +GP+D
Sbjct: 62 NLTDDDPCAICTDQTRDQTVILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLLTRLMDSQVMEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|309782343|ref|ZP_07677069.1| recombination protein RecR [Ralstonia sp. 5_7_47FAA]
gi|308918879|gb|EFP64550.1| recombination protein RecR [Ralstonia sp. 5_7_47FAA]
Length = 207
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L+ L +PG GP+SA+R HL++ + LA+A++ + CS C
Sbjct: 8 TPSALQMLVDALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDICETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K TRLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|322517156|ref|ZP_08070040.1| recombination protein R [Streptococcus vestibularis ATCC 49124]
gi|322124306|gb|EFX95817.1| recombination protein R [Streptococcus vestibularis ATCC 49124]
Length = 202
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 6 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVCG 65
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC+D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 66 RLTDDDPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 125
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 126 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 185
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 186 YADEVTLLRAIENRTEL 202
>gi|312897407|ref|ZP_07756831.1| recombination protein RecR [Megasphaera micronuciformis F0359]
gi|310621468|gb|EFQ05004.1| recombination protein RecR [Megasphaera micronuciformis F0359]
Length = 196
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 125/193 (64%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+E+L + R+PG G ++AR+ +++++ ++ +A+ ++ CS+C N+ +
Sbjct: 4 PLEHLAEQFRRLPGIGIKTARKLAYYMIQQPDEKTEAFIDAVRKAKEQMHFCSVCFNLSS 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TDPC C D RD SVI+VVE D+ A+ERSK + LYHVL G+LSPLD IGPED+ I+
Sbjct: 64 TDPCTYCTDAHRDHSVIMVVETPQDVAAIERSKDYHGLYHVLHGALSPLDGIGPEDLHIK 123
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R+ +++E+I A +EG+ TA Y+ LK VK+TR+A G+PMG ++++ D+
Sbjct: 124 ELLQRLGDTRVQEVIIATDPDVEGEATALYLARLLKTAGVKVTRIARGLPMGGDIEFADE 183
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 184 ATLAGAVANRREM 196
>gi|308235603|ref|ZP_07666340.1| recombination protein RecR [Gardnerella vaginalis ATCC 14018]
gi|311113931|ref|YP_003985152.1| recombination protein R [Gardnerella vaginalis ATCC 14019]
gi|310945425|gb|ADP38129.1| recombination protein R [Gardnerella vaginalis ATCC 14019]
Length = 202
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 116/192 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I +I +++PG GP+ A+R +++ + L A++++ V C ICGNV
Sbjct: 10 AIGRVIDAFSKLPGIGPKGAQRIAFYILSSSDVQTQDLIGAISDLRENVRFCEICGNVCE 69
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC IC D +RD + I VVE+ D+ ++ER+ +YHVLGG+++P+ +GP D+ I
Sbjct: 70 QSPCVICQDPRRDHTKICVVEEPKDIMSIERTHEYAGVYHVLGGAINPMANVGPADLKIT 129
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER++ +++E+I A+ IEG+ T Y+ L+ +D+ ITRLA G+P+G +L+Y D+
Sbjct: 130 QLLERLKDAQVKEVILALDPNIEGEATVTYLARLLEPLDISITRLASGLPVGGDLEYADE 189
Query: 189 GTIFEAIRSRTV 200
T+ A R
Sbjct: 190 ITLGRAFAGRQE 201
>gi|294635359|ref|ZP_06713853.1| recombination protein RecR [Edwardsiella tarda ATCC 23685]
gi|291091246|gb|EFE23807.1| recombination protein RecR [Edwardsiella tarda ATCC 23685]
Length = 201
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEICTICANARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLGQETLNEVILATNPTVEGEATANYIAEMCAAHGVMASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|165975531|ref|YP_001651124.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307244876|ref|ZP_07526974.1| hypothetical protein appser1_890 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247052|ref|ZP_07529105.1| hypothetical protein appser2_500 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307253830|ref|ZP_07535683.1| hypothetical protein appser9_890 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258286|ref|ZP_07540028.1| hypothetical protein appser11_900 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|165875632|gb|ABY68680.1| recombination DNA repair protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306854198|gb|EFM86405.1| hypothetical protein appser1_890 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856421|gb|EFM88571.1| hypothetical protein appser2_500 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306863190|gb|EFM95131.1| hypothetical protein appser9_890 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867625|gb|EFM99471.1| hypothetical protein appser11_900 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 221
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 24 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 83
Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R + + VVE D+ A+E++ + Y VL G LSPLD IGP +I
Sbjct: 84 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 143
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+
Sbjct: 144 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 203
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 204 VDGTTLSHSFAGRRDI 219
>gi|254304296|ref|ZP_04971654.1| recombination protein R [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148324488|gb|EDK89738.1| recombination protein R [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 197
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 115/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCNICSDNARNHNIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRIEI 197
>gi|227496712|ref|ZP_03926987.1| recombination protein RecR [Actinomyces urogenitalis DSM 15434]
gi|226833777|gb|EEH66160.1| recombination protein RecR [Actinomyces urogenitalis DSM 15434]
Length = 201
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 119/196 (60%), Gaps = 1/196 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI ++PG GP+SA+R H++ + L EA+ + +V C CG
Sbjct: 4 VYEGAVQDLIDEFGQLPGIGPKSAQRLAFHVLSADSSSVERLIEALRAVKARVRFCETCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ ++ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ +GP+D
Sbjct: 64 NIAESEQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGVGPDD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ + E+I A + G+ TA Y+ L+ ++V ++RLA G+P+GS+L+
Sbjct: 124 LRVRELLARLG-GDVEEVILATDPDVVGEATAAYLTRMLRTMEVPVSRLASGLPVGSDLE 182
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 183 YADEVTLGRAFEGRRR 198
>gi|237749100|ref|ZP_04579580.1| recombinational DNA repair protein [Oxalobacter formigenes OXCC13]
gi|229380462|gb|EEO30553.1| recombinational DNA repair protein [Oxalobacter formigenes OXCC13]
Length = 198
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 113/192 (58%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ LI+ +PG GP+SA+R HL++ L+ A+AN + V C C
Sbjct: 6 SLQQLIEAFRHLPGIGPKSAQRMAYHLLQHDRDGAQQLSVALANAISSVRHCERCNTFTE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
++ C +C DQ+RDAS++ + E AD +E++ Y VL GSLSPLD IGP++I
Sbjct: 66 SEVCEMCSDQERDASLLCITETPADQMMIEQTLTFKGYYFVLMGSLSPLDGIGPKEIHFD 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI+R ++E++ A S EG+ TAHYI + LK ++++RLA G+P+G+EL+Y+D
Sbjct: 126 KLIKRATDGIVKEVVLATSFNNEGEATAHYISEMLKVRGIRVSRLARGVPVGAELEYVDV 185
Query: 189 GTIFEAIRSRTV 200
GTI A R
Sbjct: 186 GTIARAFLDRRS 197
>gi|46143302|ref|ZP_00135500.2| COG0353: Recombinational DNA repair protein (RecF pathway)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207562|ref|YP_001052787.1| recombination protein RecR [Actinobacillus pleuropneumoniae L20]
gi|307249274|ref|ZP_07531269.1| hypothetical protein appser4_890 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307251596|ref|ZP_07533502.1| hypothetical protein appser6_1190 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256095|ref|ZP_07537882.1| hypothetical protein appser10_1000 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307260528|ref|ZP_07542221.1| hypothetical protein appser12_1020 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126096354|gb|ABN73182.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|306858673|gb|EFM90734.1| hypothetical protein appser4_890 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860907|gb|EFM92914.1| hypothetical protein appser6_1190 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865276|gb|EFM97172.1| hypothetical protein appser10_1000 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869757|gb|EFN01541.1| hypothetical protein appser12_1020 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 221
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 24 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 83
Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R + + VVE D+ A+E++ + Y VL G LSPLD IGP +I
Sbjct: 84 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 143
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+
Sbjct: 144 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 203
Query: 186 LDDGTIFEAIRSRT 199
+D T+ + R
Sbjct: 204 VDGTTLSHSFAGRR 217
>gi|73541798|ref|YP_296318.1| recombination protein RecR [Ralstonia eutropha JMP134]
gi|123624674|sp|Q46ZF9|RECR_RALEJ RecName: Full=Recombination protein recR
gi|72119211|gb|AAZ61474.1| RecR protein [Ralstonia eutropha JMP134]
Length = 204
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 4/203 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K ++ LI+ L +PG GP+SA+R HL++ + L +A+ + + C+
Sbjct: 2 KAAPPTSLQALIEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCAR 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + C C+D +RD S++ VVE AD +E++ Y VL G LSPLD IGP
Sbjct: 62 CNTFTEQEICETCLDDRRDGSILCVVETPADQIMIEQTLTYRGKYFVLMGRLSPLDGIGP 121
Query: 123 EDIGIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
++I + L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P
Sbjct: 122 KEIHLDRLLARATDTEMGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G EL+Y+D GTI A+ R L
Sbjct: 182 VGGELEYVDAGTIARAVMDRRNL 204
>gi|300790713|ref|YP_003771004.1| recombination protein RecR [Amycolatopsis mediterranei U32]
gi|299800227|gb|ADJ50602.1| recombination protein RecR [Amycolatopsis mediterranei U32]
Length = 198
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + L + + + V C +CG
Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLATDPADIARLQDVLGKVKEGVQFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D++RD +VI VVE+ D+ A+ER++ YHVLGG+L PL IGPE
Sbjct: 61 NVSEQQKCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ ++ L++RI I+E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L
Sbjct: 121 LRMRELLKRIGEADIKEIIIATDPNTEGEATATYLVRMLRNFPGLSVTRLASGLPMGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D+ T+ A+ R VL
Sbjct: 181 EFADELTLGRALSGRRVL 198
>gi|228478357|ref|ZP_04062965.1| recombination protein RecR [Streptococcus salivarius SK126]
gi|228250036|gb|EEK09306.1| recombination protein RecR [Streptococcus salivarius SK126]
Length = 198
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 62 RLTDDDPCNICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVDEIIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|223932692|ref|ZP_03624691.1| recombination protein RecR [Streptococcus suis 89/1591]
gi|302023962|ref|ZP_07249173.1| recombination protein RecR [Streptococcus suis 05HAS68]
gi|330832451|ref|YP_004401276.1| recombination protein RecR [Streptococcus suis ST3]
gi|223898662|gb|EEF65024.1| recombination protein RecR [Streptococcus suis 89/1591]
gi|329306674|gb|AEB81090.1| recombination protein RecR [Streptococcus suis ST3]
Length = 198
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ ++ A+ + + CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKTLLTRLMDNEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|260596871|ref|YP_003209442.1| recombination protein RecR [Cronobacter turicensis z3032]
gi|260216048|emb|CBA28761.1| Recombination protein recR [Cronobacter turicensis z3032]
Length = 201
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEKCNICTNPRRQENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLEAEPLKEIILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKM 199
>gi|312863516|ref|ZP_07723754.1| recombination protein RecR [Streptococcus vestibularis F0396]
gi|311101052|gb|EFQ59257.1| recombination protein RecR [Streptococcus vestibularis F0396]
Length = 198
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC+D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 62 RLTDDDPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|82702977|ref|YP_412543.1| recombination protein RecR [Nitrosospira multiformis ATCC 25196]
gi|123544262|sp|Q2Y7X0|RECR_NITMU RecName: Full=Recombination protein recR
gi|82411042|gb|ABB75151.1| recombination protein RecR [Nitrosospira multiformis ATCC 25196]
Length = 199
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 117/195 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++ LI L +PG GPRSA+R HL+++ ++ LA+++ V C C N
Sbjct: 3 APRSLDELINALRCLPGVGPRSAQRMAYHLLQRDQEGARRLADSLDYALEHVRHCEKCNN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C Q+RD +++ VVE ADL +E++ +Y VL G LSPLD IGP +I
Sbjct: 63 FTEEVVCELCSSQRRDPALLCVVEMPADLLMMEQAHCYKGMYFVLMGRLSPLDGIGPREI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R ++E+I A + T+EG+ TAHYI + L+ +KITR+A G+P+G EL++
Sbjct: 123 NLDRLLKRARDNMVKEVILATNFTVEGEATAHYIGEMLQNEGLKITRIARGLPVGGELEH 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GT+ +A+ R
Sbjct: 183 VDSGTLAQAVLERRE 197
>gi|90411568|ref|ZP_01219578.1| recombination protein RecR [Photobacterium profundum 3TCK]
gi|90327458|gb|EAS43811.1| recombination protein RecR [Photobacterium profundum 3TCK]
Length = 200
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R +L+++ Q LA+A++ + C C
Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFNLLQRNRQGGLQLADALSRAMTDIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CA+C + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEDDICAVCANPRRQENGQICVVESPADIVAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ + I ELI A + T+EG+ TAHYI + V TR+A+G+P+G EL+
Sbjct: 123 IGLDTLEFRLQKETIAELILATNPTVEGEATAHYIAELCHEYGVPATRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLAGRQKL 199
>gi|182677253|ref|YP_001831399.1| recombination protein RecR [Beijerinckia indica subsp. indica ATCC
9039]
gi|254790751|sp|B2ICM1|RECR_BEII9 RecName: Full=Recombination protein recR
gi|182633136|gb|ACB93910.1| recombination protein RecR [Beijerinckia indica subsp. indica ATCC
9039]
Length = 201
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 123/201 (61%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M I G EIE LI +LAR+PG GPRSARRA LHL++K+ +LLGPLAEA+ YN + C
Sbjct: 1 MTAPIAGPEIERLIHLLARLPGLGPRSARRAALHLIRKRTELLGPLAEALQQAYNHLIPC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+DT DPC IC D +RD ++++VVE VADLWALER+ A+ A YHVLGG+LSPLD +
Sbjct: 61 QICGNIDTRDPCTICADAKRDPTLLVVVETVADLWALERAAALPARYHVLGGTLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ +QSL ER+ +IRE+I A++AT++GQTTAHYI D L VKITRLA+G+P+G
Sbjct: 121 GPKDLNLQSLTERVAQGEIREVILAVNATVDGQTTAHYITDSLAAFPVKITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT
Sbjct: 181 GELDYLDEGTLAAALRSRTNF 201
>gi|54308212|ref|YP_129232.1| recombination protein RecR [Photobacterium profundum SS9]
gi|73621504|sp|Q6LTE6|RECR_PHOPR RecName: Full=Recombination protein recR
gi|46912640|emb|CAG19430.1| putative recombinational DNA repair protein [Photobacterium
profundum SS9]
Length = 202
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R +L+++ Q LA+A+ + C C
Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFNLLQRNRQGGLQLADALNRAMTDIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CA+C + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEDDICAVCANPRRQENGQICVVESPADIVAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ + I ELI A + T+EG+ TAHYI + V TR+A+G+P+G EL+
Sbjct: 123 IGLDTLEFRLQKETIAELILATNPTVEGEATAHYIAELCHEYGVPATRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLAGRQKL 199
>gi|256848134|ref|ZP_05553578.1| recombination protein RecR [Lactobacillus coleohominis 101-4-CHN]
gi|256715194|gb|EEU30171.1| recombination protein RecR [Lactobacillus coleohominis 101-4-CHN]
Length = 199
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + E + ++A+ + + CSICGN
Sbjct: 3 YPEPIAKLIASYMKLPGIGEKTATRLAFYTIGMDEDDVKDFSKALVAVKEDLHYCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC DQ RD + I+VVE+ D+ A+ER + LYHVL G++SP + GP DI
Sbjct: 63 ITEDDPCPICKDQGRDQTTIVVVENSRDVMAMERMNEYHGLYHVLHGTISPSEGTGPMDI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SLIER++ +++E+I A +A+++G+TTA Y+ LK +K+TRLA+G+ G+++D
Sbjct: 123 NIPSLIERLKKHSEVQEVIIATNASMDGETTAQYLAKLLKPAGIKVTRLAHGLSAGADID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 183 YTDEVTLFKAVQGRTEM 199
>gi|78042767|ref|YP_361462.1| recombination protein RecR [Carboxydothermus hydrogenoformans
Z-2901]
gi|123575269|sp|Q3A8S2|RECR_CARHZ RecName: Full=Recombination protein recR
gi|77994882|gb|ABB13781.1| recombination protein RecR [Carboxydothermus hydrogenoformans
Z-2901]
Length = 199
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 131/197 (66%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI+ LA++PG GP++A++ L+L++ E+ LAEA+ CSIC
Sbjct: 2 YFAEPVAKLIEHLAKLPGIGPKTAQKLALYLLEIPEEEARALAEAIITARKNTRYCSICF 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TDPCAIC + R+ +++VVE+ D+ A+ER+ + N +YHVL G LSP+ IGPED
Sbjct: 62 NLTDTDPCAICRNPGRNHRLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPED 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ + + E+I A + T+EG+ TA Y+ LK ++ K+TR+A+G+P+GS+++
Sbjct: 122 LKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRIAHGLPVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ TI +A+ R VL
Sbjct: 182 YADELTIRKALEGRRVL 198
>gi|219850062|ref|YP_002464495.1| recombination protein RecR [Chloroflexus aggregans DSM 9485]
gi|254790758|sp|B8G7M4|RECR_CHLAD RecName: Full=Recombination protein recR
gi|219544321|gb|ACL26059.1| recombination protein RecR [Chloroflexus aggregans DSM 9485]
Length = 205
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 113/195 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ LI+ AR+PG GP++A R T +L++ + + LA+A+ ++ +V C C N+
Sbjct: 11 AAPVARLIEEFARLPGIGPKTASRLTFYLLRAEPKQAQALAQAILDVKAQVGYCRRCFNI 70
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D RD + I VVE+ D+ A+ER+ A LYHVL G ++PL+ I ED+
Sbjct: 71 TVDELCPICRDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLK 130
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I LI R+ + + E+I A + EG+ TA ++ L + V++TR A G+P G +L++
Sbjct: 131 IDELIARVRSEPVNEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGGDLEWA 190
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A+ R L
Sbjct: 191 DPETLGSALEGRREL 205
>gi|237740850|ref|ZP_04571331.1| recombination protein recR [Fusobacterium sp. 4_1_13]
gi|229431147|gb|EEO41359.1| recombination protein recR [Fusobacterium sp. 4_1_13]
Length = 197
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 115/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG
Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N +D C+IC D R+ +I VVE+ D+ LE++ +YHVL G L PL+ I P +
Sbjct: 61 NYCESDTCSICSDNIRNHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+
Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D TI A+ R +
Sbjct: 181 FSDTATISRALDDRVEI 197
>gi|77917991|ref|YP_355806.1| recombination protein RecR [Pelobacter carbinolicus DSM 2380]
gi|123574983|sp|Q3A7K8|RECR_PELCD RecName: Full=Recombination protein recR
gi|77544074|gb|ABA87636.1| DNA replication and repair protein RecR [Pelobacter carbinolicus
DSM 2380]
Length = 199
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 119/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
L+ A++PG G ++A R TL ++++ Q L EA+ + + CS C
Sbjct: 4 FTPSFNRLVGEFAKLPGIGRKTAVRLTLFMLRQTSQDALALGEAVRELKERTRFCSRCFY 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DPC +C D RD +I VVE+ D+ A+ERS++ YHVL GSLSPLD IGP+D+
Sbjct: 64 FTEEDPCPLCTDVGRDDQLICVVEEPQDVIAIERSRSFRGRYHVLHGSLSPLDGIGPDDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ER++ ++E++ A + +EG+ TA Y+ ++ VK+TRLA+GIP GS+L+Y
Sbjct: 124 KIDALLERLQQNNVKEVLLATNFDVEGEATALYLAKVIQPFGVKVTRLAHGIPTGSDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ R L
Sbjct: 184 VDEATVNHAVEGRREL 199
>gi|290474635|ref|YP_003467515.1| gap repair protein [Xenorhabdus bovienii SS-2004]
gi|289173948|emb|CBJ80735.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Xenorhabdus bovienii SS-2004]
Length = 202
Score = 286 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCQDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQEQCTICGNPRRQQNGQICVVETPADIHAIEQTGQFAGRYFVLMGRLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSSETLSEIILATNPTVEGEATANYIAEMCSQYGVIASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRQRI 199
>gi|332829165|gb|EGK01829.1| recombination protein recR [Dysgonomonas gadei ATCC BAA-286]
Length = 207
Score = 286 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 127/201 (63%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + AR+PG G ++A R LHL+++ + ++ A+++ + ++V C
Sbjct: 1 MNQKYPSILLENAVNEFARLPGIGRKTALRLILHLLRQDDAMVDGFAQSLVALKHEVRYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C IC D+ RDA+ I VVE++ ++ A+E + YHVLGG +SP+D I
Sbjct: 61 KVCHNISDAEVCPICQDKSRDATTICVVENIKEVMAIENTMQFRGQYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ER+ I E+I A+S T+EG TT YI KL DVK++ +A GI +G
Sbjct: 121 GPADLEIESLVERVSQGNINEIILALSTTMEGDTTNFYIYKKLAPYDVKVSMIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT+
Sbjct: 181 DEIEYADEVTLGRSILNRTLF 201
>gi|78213164|ref|YP_381943.1| DNA replication and repair protein RecR [Synechococcus sp. CC9605]
gi|78197623|gb|ABB35388.1| recombination protein RecR [Synechococcus sp. CC9605]
Length = 219
Score = 286 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C +
Sbjct: 25 FTKPLARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFH 84
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC + +R VI VV D DL ALER++ + YHVLGG +SP+D IGPE +
Sbjct: 85 LSADPECEICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELL 144
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y
Sbjct: 145 RVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPF-CSVSRIAYGLPMGSELEY 203
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 204 ADEVTLSRALEGRRP 218
>gi|229529853|ref|ZP_04419243.1| recombination protein RecR [Vibrio cholerae 12129(1)]
gi|229333627|gb|EEN99113.1| recombination protein RecR [Vibrio cholerae 12129(1)]
Length = 200
Score = 286 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRHKL 199
>gi|39933694|ref|NP_945970.1| recombination protein RecR [Rhodopseudomonas palustris CGA009]
gi|192289051|ref|YP_001989656.1| recombination protein RecR [Rhodopseudomonas palustris TIE-1]
gi|73621510|sp|Q6NC55|RECR_RHOPA RecName: Full=Recombination protein recR
gi|229470341|sp|B3QCG7|RECR_RHOPT RecName: Full=Recombination protein recR
gi|39647540|emb|CAE26061.1| putative recombination protein recR [Rhodopseudomonas palustris
CGA009]
gi|192282800|gb|ACE99180.1| recombination protein RecR [Rhodopseudomonas palustris TIE-1]
Length = 200
Score = 286 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 110/196 (56%), Positives = 153/196 (78%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +CS CGN
Sbjct: 5 AGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMAPLASALQVAIDKIEVCSTCGN 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+D+ +PC +C D +RD+S+I+VV DVADLWALER+ A N YHVLG +LSPLD +GPED+
Sbjct: 65 IDSQNPCTVCTDPRRDSSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGVGPEDL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L++R + E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G ELDY
Sbjct: 125 TIDALVKRAHDPGVAEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVGGELDY 184
Query: 186 LDDGTIFEAIRSRTVL 201
LD+GT+ A+R RT+
Sbjct: 185 LDEGTLSAAMRQRTLF 200
>gi|218132672|ref|ZP_03461476.1| hypothetical protein BACPEC_00532 [Bacteroides pectinophilus ATCC
43243]
gi|217992398|gb|EEC58401.1| hypothetical protein BACPEC_00532 [Bacteroides pectinophilus ATCC
43243]
Length = 198
Score = 286 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ G +I LI+ L+ +PG G +SA+R H++ ++ + LA+ M N + V CS C
Sbjct: 2 DLYGSQITKLIEELSALPGVGAKSAQRLAFHIINMPKERVEQLAQTMVNARSNVRYCSEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ ++ C +C +R+ VI+VVE D+ A E++ + +YHVL G++SP IGP
Sbjct: 62 YALTDSELCPVCSSTKRNHKVIMVVESTRDMAAYEKTGKYDGVYHVLHGAISPALGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ LI R+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKLKELITRL-AGDVDEVIIATNSSLEGETTAMYISKLVKPTGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ A+ R L
Sbjct: 181 EYIDEVTLLRALEGRVDL 198
>gi|187928131|ref|YP_001898618.1| recombination protein RecR [Ralstonia pickettii 12J]
gi|187725021|gb|ACD26186.1| recombination protein RecR [Ralstonia pickettii 12J]
Length = 206
Score = 286 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 78/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LA+A++ + CS C
Sbjct: 7 TPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQEVCETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K TRLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|290968133|ref|ZP_06559678.1| recombination protein RecR [Megasphaera genomosp. type_1 str. 28L]
gi|290781808|gb|EFD94391.1| recombination protein RecR [Megasphaera genomosp. type_1 str. 28L]
Length = 196
Score = 286 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 123/193 (63%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ L + R+PG G ++AR+ ++V++ ++ + A+ K+C CS C N+ +
Sbjct: 4 PLDRLTEQFRRLPGIGIKTARKLAYYMVQEPQEKVNEFIHALQEAKQKMCFCSQCFNLSS 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC IC D++RD S+I VVE D+ A+ERS LYHVL G+LSPLD IG +++ I+
Sbjct: 64 QDPCPICSDRKRDRSMICVVETPQDVLAVERSGNYGGLYHVLQGALSPLDGIGADNLRIK 123
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R+E +I+E+I A +EG+ TA Y+ LK + +++TR+A G+P G +L+Y D+
Sbjct: 124 ELLQRLENTEIKEVIIATDPDVEGEATALYLARLLKPVPIRVTRIARGLPAGGDLEYADE 183
Query: 189 GTIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 184 ATLAGAVANRLEM 196
>gi|197284053|ref|YP_002149925.1| recombination protein RecR [Proteus mirabilis HI4320]
gi|227358075|ref|ZP_03842417.1| recombination protein [Proteus mirabilis ATCC 29906]
gi|229470337|sp|B4EU79|RECR_PROMH RecName: Full=Recombination protein recR
gi|194681540|emb|CAR40459.1| recombination protein [Proteus mirabilis HI4320]
gi|227161810|gb|EEI46842.1| recombination protein [Proteus mirabilis ATCC 29906]
Length = 201
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCCDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEEERCTICANARRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA+YI + D+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSQEPISEVILATNPTVEGEATANYIAEICAQYDIAASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ +I R +
Sbjct: 183 MVDGTTLSHSIAGRQKI 199
>gi|146319007|ref|YP_001198719.1| recombination protein RecR [Streptococcus suis 05ZYH33]
gi|253752074|ref|YP_003025215.1| recombination protein RecR [Streptococcus suis SC84]
gi|253753899|ref|YP_003027040.1| recombination protein RecR [Streptococcus suis P1/7]
gi|253755226|ref|YP_003028366.1| recombination protein RecR [Streptococcus suis BM407]
gi|166223509|sp|A4VW30|RECR_STRSY RecName: Full=Recombination protein recR
gi|145689813|gb|ABP90319.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus
suis 05ZYH33]
gi|251816363|emb|CAZ51994.1| recombination protein RecR [Streptococcus suis SC84]
gi|251817690|emb|CAZ55438.1| recombination protein RecR [Streptococcus suis BM407]
gi|251820145|emb|CAR46477.1| recombination protein RecR [Streptococcus suis P1/7]
gi|292558657|gb|ADE31658.1| RecR protein [Streptococcus suis GZ1]
gi|319758440|gb|ADV70382.1| recombination protein RecR [Streptococcus suis JS14]
Length = 198
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ ++ A+ + + CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKTLLTRLMENEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|313146708|ref|ZP_07808901.1| recombination protein recR [Bacteroides fragilis 3_1_12]
gi|313135475|gb|EFR52835.1| recombination protein recR [Bacteroides fragilis 3_1_12]
Length = 207
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ ++ ++ + ++V C
Sbjct: 3 MNQQYPSTLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTSVVEAFGSSIITLKHEVKYC 62
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS++ VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 63 KVCHNISDTETCQICANPQRDASMVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 122
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ LA G+ +G
Sbjct: 123 GPGDLQIESLVRRVAEGGINEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVLARGVSIG 182
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 183 DELEYTDEITLGRSIVNRTTF 203
>gi|322834003|ref|YP_004214030.1| recombination protein RecR [Rahnella sp. Y9602]
gi|321169204|gb|ADW74903.1| recombination protein RecR [Rahnella sp. Y9602]
Length = 201
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEICTICANPRRKENGQVCVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G ELD
Sbjct: 123 IGLGRLEERLESENIQEVILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGRHPF 199
>gi|198275302|ref|ZP_03207833.1| hypothetical protein BACPLE_01461 [Bacteroides plebeius DSM 17135]
gi|198271885|gb|EDY96155.1| hypothetical protein BACPLE_01461 [Bacteroides plebeius DSM 17135]
Length = 236
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 124/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ + + A++ + +V C
Sbjct: 32 MNQQYPSVLLEKAVGEFAKLPGIGRKTAMRLVLHLLRQDTATVEAFSSAISTLKKEVKYC 91
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ TD C IC + RD + + VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 92 KVCHNISDTDVCRICSNPSRDVTTVCVVENIRDVMAVENTQQYRGLYHVLGGVISPMDGI 151
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R++ ++E+I A+S+T+EG TT YI KL G DVKIT +A GI +G
Sbjct: 152 GPSDLEIESLVNRVKEGTVKEVILALSSTMEGDTTNFYIFRKLVGCDVKITVIARGISIG 211
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +R
Sbjct: 212 DELQYTDEVTLGRSIVNRVAF 232
>gi|149189265|ref|ZP_01867551.1| recombination protein RecR [Vibrio shilonii AK1]
gi|148836824|gb|EDL53775.1| recombination protein RecR [Vibrio shilonii AK1]
Length = 199
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LA+A+++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLADALSSAMTEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICSNPKRKENGQLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRQGDIGEVILATNPTVEGEATAHYIAELCHEHKVSASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRQKI 199
>gi|53713342|ref|YP_099334.1| recombination protein RecR [Bacteroides fragilis YCH46]
gi|60681587|ref|YP_211731.1| recombination protein RecR [Bacteroides fragilis NCTC 9343]
gi|253565320|ref|ZP_04842775.1| recombination protein recR [Bacteroides sp. 3_2_5]
gi|255008967|ref|ZP_05281093.1| recombination protein RecR [Bacteroides fragilis 3_1_12]
gi|265763415|ref|ZP_06091983.1| recombination protein RecR [Bacteroides sp. 2_1_16]
gi|73621459|sp|Q5LDK8|RECR_BACFN RecName: Full=Recombination protein recR
gi|73621460|sp|Q64UM9|RECR_BACFR RecName: Full=Recombination protein recR
gi|52216207|dbj|BAD48800.1| recombination protein RecR [Bacteroides fragilis YCH46]
gi|60493021|emb|CAH07801.1| putative RecR-family recombination protein [Bacteroides fragilis
NCTC 9343]
gi|251945599|gb|EES86006.1| recombination protein recR [Bacteroides sp. 3_2_5]
gi|263256023|gb|EEZ27369.1| recombination protein RecR [Bacteroides sp. 2_1_16]
gi|301163145|emb|CBW22694.1| putative RecR-family recombination protein [Bacteroides fragilis
638R]
Length = 205
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ ++ ++ + ++V C
Sbjct: 1 MNQQYPSTLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTSVVEAFGSSIITLKHEVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ T+ C IC + QRDAS++ VVE++ D+ A+E ++ LYHVLGG +SP+D +
Sbjct: 61 KVCHNISDTETCQICANPQRDASMVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ LA G+ +G
Sbjct: 121 GPGDLQIESLVRRVAEGGINEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVLARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEITLGRSIVNRTTF 201
>gi|148977689|ref|ZP_01814250.1| recombination protein RecR [Vibrionales bacterium SWAT-3]
gi|145963057|gb|EDK28326.1| recombination protein RecR [Vibrionales bacterium SWAT-3]
Length = 199
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDTCHICTNPKRQENGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + +V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRHKI 199
>gi|119485345|ref|ZP_01619673.1| recombination protein RecR [Lyngbya sp. PCC 8106]
gi|119457101|gb|EAW38227.1| recombination protein RecR [Lyngbya sp. PCC 8106]
Length = 189
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 120/188 (63%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ L R+PG GP++A+R ++++K+ E + LA+A+ + +V LC +C ++ C
Sbjct: 2 IEQLQRLPGVGPKTAQRLAMYIIKRSETEVEALAQALLDAKKQVGLCKVCFHLSAEPICD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC QRD I VV D D+ A+E+++ YHVLGG +SP+D IGPE + I+ L+ R
Sbjct: 62 ICRHPQRDNETICVVSDSRDVIAIEKTREYRGKYHVLGGVISPMDGIGPEQLTIEPLVRR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ +++E+I AIS ++EG+TT Y+ +K ++TR+A+G+PMG +L+Y D+ T+
Sbjct: 122 VSQNQVKEVIIAISPSVEGETTTLYLGQLIKPF-TRVTRIAFGLPMGGDLEYADEITLAR 180
Query: 194 AIRSRTVL 201
A+ R L
Sbjct: 181 ALEGRREL 188
>gi|319947395|ref|ZP_08021627.1| recombination protein R [Streptococcus australis ATCC 700641]
gi|319746335|gb|EFV98596.1| recombination protein R [Streptococcus australis ATCC 700641]
Length = 198
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIESYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELSYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + CAIC D+ RD S I+VVED D+ A+E + + YHVL G +SP++ +GP+D
Sbjct: 62 NLTDEEECAICRDETRDPSTILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ +++E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLITRLMDHEVQEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|111021188|ref|YP_704160.1| recombination protein RecR [Rhodococcus jostii RHA1]
gi|226363548|ref|YP_002781330.1| recombination protein RecR [Rhodococcus opacus B4]
gi|123340193|sp|Q0S8Y4|RECR_RHOSR RecName: Full=Recombination protein recR
gi|110820718|gb|ABG96002.1| recombination protein [Rhodococcus jostii RHA1]
gi|226242037|dbj|BAH52385.1| recombination protein RecR [Rhodococcus opacus B4]
Length = 202
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG
Sbjct: 1 MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRVRDGVQFCVVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 TVSDKEHCRICADPRRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ RI ++ + E+I A EG+ TA Y++ L+ + ++RLA G+PM
Sbjct: 121 LRIRELLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADELTLGRALSGRRTL 202
>gi|259048075|ref|ZP_05738476.1| recombination protein RecR [Granulicatella adiacens ATCC 49175]
gi|259035136|gb|EEW36391.1| recombination protein RecR [Granulicatella adiacens ATCC 49175]
Length = 198
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 121/196 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG G ++A R + +E+ + A ++ + + +CS+CGN
Sbjct: 3 YPEPIARLMDSFMKLPGIGAKTAARLAFFCMDMREEDVLNFANSLISCKRDLRMCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V DPC IC D RD + I+VVED D+ ++ER K LYHVL G LSP++ GP+DI
Sbjct: 63 VTQEDPCEICADTTRDRTKILVVEDARDVMSMERMKEYKGLYHVLHGVLSPMEGTGPDDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SLI R++ +I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NITSLITRLQDPEIQEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+F AI R L
Sbjct: 183 ADEMTLFRAIEGRREL 198
>gi|260887503|ref|ZP_05898766.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
gi|330837883|ref|YP_004412463.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
gi|260862790|gb|EEX77290.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
gi|329745647|gb|AEB99003.1| recombination protein RecR [Selenomonas sputigena ATCC 35185]
Length = 201
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ +PG G ++A R H++ LAEA+ K+ CS+C N+
Sbjct: 6 PLAKLIEHFRALPGIGSKTAVRLAYHVLDMDAAKARALAEAIVEAREKIGFCSVCCNLSD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPCAIC ++RD S I VVE D+ A+ER K LYHVL GSLSPL +GPE++ ++
Sbjct: 66 QDPCAICASEKRDRSKICVVEQPQDVAAVERMKDYKGLYHVLHGSLSPLSGVGPENLRVK 125
Query: 129 SLIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R+E + +++E+I A + T+EG+ TA Y+ LK +K+TR+A+G+P+G +L+Y
Sbjct: 126 ELLHRLEGEAGAEVQEIIMATNPTVEGEATAMYLARLLKPAGLKVTRIAHGLPIGGDLEY 185
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ +R +
Sbjct: 186 ADEVTLAKALENRKEI 201
>gi|33151560|ref|NP_872913.1| recombination protein RecR [Haemophilus ducreyi 35000HP]
gi|33147780|gb|AAP95302.1| recombination DNA repair protein [Haemophilus ducreyi 35000HP]
Length = 201
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENLI L +PG GP+SA+R HL+++ LA+A+ + C+ C
Sbjct: 3 TSPLLENLIDALRALPGIGPKSAQRMAYHLLQRNRNGGLNLAKALNEAMTHIGHCNACRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + +VE D+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEEECTICKNPRRQISGQLCIVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + E+I A + TIEG TA+YI + +VK+TR+A+GIP+G L+
Sbjct: 123 IGLDLLQQRLEQESFHEIILATNPTIEGDATANYIAEICHLYNVKVTRIAHGIPVGGSLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R
Sbjct: 183 MVDGTTLSHSFAGRRDF 199
>gi|27365347|ref|NP_760875.1| recombination protein RecR [Vibrio vulnificus CMCP6]
gi|37680593|ref|NP_935202.1| recombination protein RecR [Vibrio vulnificus YJ016]
gi|320155734|ref|YP_004188113.1| recombination protein RecR [Vibrio vulnificus MO6-24/O]
gi|29611846|sp|Q8DB22|RECR_VIBVU RecName: Full=Recombination protein recR
gi|56749650|sp|Q7MIV4|RECR_VIBVY RecName: Full=Recombination protein recR
gi|27361494|gb|AAO10402.1| recombination protein RecR [Vibrio vulnificus CMCP6]
gi|37199341|dbj|BAC95173.1| Recombinational DNA repair protein [Vibrio vulnificus YJ016]
gi|319931046|gb|ADV85910.1| recombination protein RecR [Vibrio vulnificus MO6-24/O]
Length = 200
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A+++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSHAMTEIGHCNECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + ++ VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDVCHICNNPKRQENGLLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDIKEVILATNPTVEGEATAHYIAELCREHKVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLLGRHKL 199
>gi|254284041|ref|ZP_04959009.1| recombination protein RecR [gamma proteobacterium NOR51-B]
gi|219680244|gb|EED36593.1| recombination protein RecR [gamma proteobacterium NOR51-B]
Length = 201
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 116/194 (59%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
IE LI+ L +PG GP+SA+R TL L+++ + LA+A+ +V C C N
Sbjct: 4 SPSIEALIEALRCLPGVGPKSAQRMTLTLLERDREGAALLAQALTTALERVGRCQRCRNF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C IC D +RD +++ VVE AD+ A+E S + ++ VL G LSP+D IGPE+IG
Sbjct: 64 TELPVCEICADPRRDQALLCVVETPADVMAIEHSGSYRGVFFVLMGHLSPIDGIGPEEIG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L R + E+I A + T+EG+TTA+YI + + V I+++A+G+P+G EL++
Sbjct: 124 LTELASRFHEGDLAEVILATNPTVEGETTAYYIAQQARSAGVTISKIAHGVPLGGELEFT 183
Query: 187 DDGTIFEAIRSRTV 200
D T+ A+ RT
Sbjct: 184 DATTLAHALSGRTR 197
>gi|220934250|ref|YP_002513149.1| recombination protein RecR [Thioalkalivibrio sp. HL-EbGR7]
gi|219995560|gb|ACL72162.1| recombination protein RecR [Thioalkalivibrio sp. HL-EbGR7]
Length = 197
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L +PG GP+SA+R LHL+++ LA + + ++ C +C
Sbjct: 1 MKSSLLDELIDALRCLPGVGPKSAQRMALHLLERDRPGGERLAAVLQDAMARIGHCKVCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C +C D R V+ VVE AD+ A+E++ YHVL G LSPLD IGPE+
Sbjct: 61 TLTEHELCRVCADPGRQRDVLCVVETPADVLAVEQATGFRGQYHVLLGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R++ +IRE+I A S T EG+ TAHYI + + ++ TR+A+G+P+G EL+
Sbjct: 121 LGLDRLETRLDQGEIREVILATSTTAEGEVTAHYIGELARARGIRSTRIAHGVPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D GT+ A R
Sbjct: 181 YVDRGTLSHAFEGRRE 196
>gi|332142046|ref|YP_004427784.1| recombination protein RecR [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552068|gb|AEA98786.1| recombination protein RecR [Alteromonas macleodii str. 'Deep
ecotype']
Length = 199
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L +PG G +SA+R HL+++ L+ + N + C C
Sbjct: 3 FSPLLSELIQALTCLPGVGNKSAQRMAFHLLERNRTGAIDLSNVLHNAMEHIHHCKRCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+
Sbjct: 63 FTEDELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI +V +R+A+G+P+G EL+
Sbjct: 123 IGLTELEGRLSAGGINEVILATNPTVEGEATAHYIAQLCASHNVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A R L
Sbjct: 183 YIDGNTLTHAFSGRRKL 199
>gi|323465899|gb|ADX69586.1| Recombination protein recR [Lactobacillus helveticus H10]
Length = 190
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I R+PG G ++A R + + E+ + ++A+ + N + C ICGN+ + C
Sbjct: 2 IDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGNITEKEVCD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I I+SLI R
Sbjct: 62 ICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEINIKSLITR 121
Query: 134 IEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y + T+
Sbjct: 122 LQKNDDVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANSITLK 181
Query: 193 EAIRSRTVL 201
A++ RT L
Sbjct: 182 RAVQGRTAL 190
>gi|256419940|ref|YP_003120593.1| recombination protein RecR [Chitinophaga pinensis DSM 2588]
gi|256034848|gb|ACU58392.1| recombination protein RecR [Chitinophaga pinensis DSM 2588]
Length = 205
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ IEN + AR+PG G ++A R LHL+K+ + E + + ++ C +C
Sbjct: 3 FSSALIENAVNEFARLPGIGKKTALRLVLHLLKQDPAQVKLFGEVVTRMREQIKFCKVCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C+IC R+ +++ VVE++ D+ A+E ++ N +YHVLGG +SP+D IGPE
Sbjct: 63 NVSDQEVCSICSSPSRNKALVCVVENIRDVMAIENTQQFNGVYHVLGGIISPIDGIGPEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL++R++ + I E+I A+S TIEG TT +Y+ KLK KIT +A GI G EL+
Sbjct: 123 LNIYSLVDRVQQQGIDEIIMALSPTIEGDTTIYYLSKKLKEFPCKITTIARGIAFGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +I +R L
Sbjct: 183 YADEMTLARSISNRLPL 199
>gi|331265935|ref|YP_004325565.1| recombination protein RecR [Streptococcus oralis Uo5]
gi|326682607|emb|CBZ00224.1| recombination protein RecR [Streptococcus oralis Uo5]
Length = 198
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYISRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|325911633|ref|ZP_08174041.1| recombination protein RecR [Lactobacillus iners UPII 143-D]
gi|325476619|gb|EGC79777.1| recombination protein RecR [Lactobacillus iners UPII 143-D]
Length = 199
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN
Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDEDVEDFSQALIEAKKQIHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I
Sbjct: 63 ITDTDPCEICSNANRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++
Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRISL 199
>gi|322515728|ref|ZP_08068693.1| recombination protein R [Actinobacillus ureae ATCC 25976]
gi|322118190|gb|EFX90499.1| recombination protein R [Actinobacillus ureae ATCC 25976]
Length = 201
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C+ C
Sbjct: 4 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALNEAMTHIGHCNSCRTF 63
Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R + + VVE D+ A+E++ + Y VL G LSPLD IGP +I
Sbjct: 64 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+
Sbjct: 124 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 184 VDGTTLSHSFAGRRDI 199
>gi|269138378|ref|YP_003295078.1| recombination protein [Edwardsiella tarda EIB202]
gi|267984038|gb|ACY83867.1| recombination protein [Edwardsiella tarda EIB202]
gi|304558408|gb|ADM41072.1| Recombination protein RecR [Edwardsiella tarda FL6-60]
Length = 201
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEARLGQETLSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSR 198
+D T+ ++ R
Sbjct: 183 MVDGTTLSHSLAGR 196
>gi|82542965|ref|YP_406912.1| recombination protein RecR [Shigella boydii Sb227]
gi|82775797|ref|YP_402144.1| recombination protein RecR [Shigella dysenteriae Sd197]
gi|309786055|ref|ZP_07680684.1| recombination protein RecR [Shigella dysenteriae 1617]
gi|123560410|sp|Q325C4|RECR_SHIBS RecName: Full=Recombination protein recR
gi|123563329|sp|Q32J52|RECR_SHIDS RecName: Full=Recombination protein recR
gi|81239945|gb|ABB60655.1| recombination and repair protein [Shigella dysenteriae Sd197]
gi|81244376|gb|ABB65084.1| recombination and repair [Shigella boydii Sb227]
gi|308926166|gb|EFP71644.1| recombination protein RecR [Shigella dysenteriae 1617]
gi|320184088|gb|EFW58907.1| Recombination protein RecR [Shigella flexneri CDC 796-83]
gi|332098534|gb|EGJ03500.1| recombination protein RecR [Shigella boydii 3594-74]
Length = 201
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L + G GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD++A+E++ + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHKI 199
>gi|167562531|ref|ZP_02355447.1| recombination protein RecR [Burkholderia oklahomensis EO147]
gi|167569717|ref|ZP_02362591.1| recombination protein RecR [Burkholderia oklahomensis C6786]
Length = 200
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 5 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 65 FTEAQICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 125 HFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 185 VDAGTIARAMLDRRTL 200
>gi|119510774|ref|ZP_01629900.1| RecR protein [Nodularia spumigena CCY9414]
gi|119464537|gb|EAW45448.1| RecR protein [Nodularia spumigena CCY9414]
Length = 185
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP+SA+R LH++K+ E + LA+A+ + ++ LCS+C ++ C IC
Sbjct: 1 MQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIDAKKQIGLCSVCFHLSADPVCEICR 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
RD + I VV D DL ALE+++ YHVLGG +SP+D IGPE + IQ+L+ R+
Sbjct: 61 HPNRDDTSICVVADSRDLIALEKTREYKGKYHVLGGVISPMDGIGPEQLTIQALVRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+K +E+I AIS TIEG+TT YI LK K+TR+A+G+P+G +L+Y D+ T+ A+
Sbjct: 121 QKTQEVIMAISPTIEGETTTLYIGQLLKPF-TKVTRIAFGLPVGGDLEYADEVTLARALE 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRREL 184
>gi|284006440|emb|CBA71686.1| recombination protein [Arsenophonus nasoniae]
Length = 201
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMQLAQALTRAMSEIGHCQGCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C+IC + +R S I VVE AD++A+E++ Y VL G LSPLD IGP+D
Sbjct: 63 FTEKDHCSICTNPRRQQSGQICVVESPADIYAIEQTGQFVGRYFVLMGHLSPLDGIGPKD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ SL +++ + + E+I A + TIEG+ TA+YI V +R+A+GIP+G EL+
Sbjct: 123 IGLDSLADKLATETVSEVILATNPTIEGEATANYIAGICAQYQVMASRIAHGIPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ +I R +
Sbjct: 183 MVDGTTLSHSIIGRQKI 199
>gi|255745473|ref|ZP_05419421.1| recombination protein RecR [Vibrio cholera CIRS 101]
gi|255736548|gb|EET91945.1| recombination protein RecR [Vibrio cholera CIRS 101]
Length = 195
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQ 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+
Sbjct: 62 DVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L R++ I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D
Sbjct: 122 TLDYRLQRGDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 182 TTLSHSLLGRHKL 194
>gi|156975354|ref|YP_001446261.1| recombination protein RecR [Vibrio harveyi ATCC BAA-1116]
gi|171769809|sp|A7MUE4|RECR_VIBHB RecName: Full=Recombination protein recR
gi|156526948|gb|ABU72034.1| hypothetical protein VIBHAR_03085 [Vibrio harveyi ATCC BAA-1116]
Length = 194
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 2 LEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRTFTEE 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+
Sbjct: 62 EVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+ +D
Sbjct: 122 VLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R +
Sbjct: 182 TTLSHSLLGRHKI 194
>gi|239993308|ref|ZP_04713832.1| recombination protein RecR [Alteromonas macleodii ATCC 27126]
Length = 199
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L +PG G +SA+R HL+++ L+ + N + C C
Sbjct: 3 FSPLLSELIQALTCLPGVGNKSAQRMAFHLLERNRTGAIDLSNVLHNAMEHIHHCKRCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+
Sbjct: 63 FTEDELCDICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI +V +R+A+G+P+G EL+
Sbjct: 123 IGLTELEARLAAGGINEVILATNPTVEGEATAHYIAQLCASHNVDASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A R L
Sbjct: 183 YIDGNTLTHAFSGRRKL 199
>gi|78187144|ref|YP_375187.1| recombination protein RecR [Chlorobium luteolum DSM 273]
gi|123582928|sp|Q3B3D7|RECR_PELLD RecName: Full=Recombination protein recR
gi|78167046|gb|ABB24144.1| RecR protein [Chlorobium luteolum DSM 273]
Length = 204
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 78/202 (38%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + IE LI +R+PG G ++ARR ++++++ LA A+ ++ ++V CS+C
Sbjct: 2 QYSSSSIEALIDAFSRLPGVGRKTARRLAMYVLQQPRLEAERLARALIDVKDRVIRCSVC 61
Query: 64 GNVD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC+IC Q RD +VI VVE D+ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNVTDREEDPCSICTSQGRDRTVICVVESPVDVLAFEKTGHYRGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIEV---KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI I+ L+ R+ +RE++ A++ TIEG+TT+ Y+ LK + V++T++A GIP
Sbjct: 122 PDDIKIRELLGRLSPEGIGGVREIVLALNPTIEGETTSLYLSRLLKPLGVEVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTV 200
+G+EL+++D+ T+ A+ R+
Sbjct: 182 VGAELEFIDEATLSRAMEGRSA 203
>gi|307719901|ref|YP_003875433.1| recombination protein RecR [Spirochaeta thermophila DSM 6192]
gi|306533626|gb|ADN03160.1| recombination protein RecR [Spirochaeta thermophila DSM 6192]
Length = 202
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 112/194 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E LI L+R+PG G +SA R L+K + L + + ++V CS CG
Sbjct: 2 NSLEVLIGHLSRLPGVGKKSASRIAHWLLKADRAFVQALGRLIMELPDRVKRCSRCGMYS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D RD I VVE +D+WA+E + LYHVL G+++PL+ + PED+ I
Sbjct: 62 DATLCEICSDPARDHGTICVVEQPSDVWAIEATHTYRGLYHVLHGAIAPLEGVRPEDLTI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R+E + + E+I A + T+EG TTA Y++ LK K++RLA G+P+G +L+Y D
Sbjct: 122 DALVRRLEREPVEEVIIATNPTVEGDTTALYLVRLLKDWGGKVSRLALGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R +
Sbjct: 182 RVTLARALEGRQRI 195
>gi|303251897|ref|ZP_07338068.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302649327|gb|EFL79512.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
Length = 201
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 4 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 63
Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R + + VVE D+ A+E++ + Y VL G LSPLD IGP +I
Sbjct: 64 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+
Sbjct: 124 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 184 VDGTTLSHSFAGRRDI 199
>gi|89892859|ref|YP_516346.1| hypothetical protein DSY0113 [Desulfitobacterium hafniense Y51]
gi|122484179|sp|Q251Z0|RECR_DESHY RecName: Full=Recombination protein recR
gi|89332307|dbj|BAE81902.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 198
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 126/201 (62%), Gaps = 3/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + +LI L+R+PG GP++A R +L+++ Q+ LAE M ++ C
Sbjct: 1 MDFLNYPEPLADLITGLSRLPGIGPKTAGRLAFYLLQQP-QVAENLAETMIRAQREIRQC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C N DPC IC ++R+ +++ +VE D+ +LE+++ LYHVL G +SPL+ +
Sbjct: 60 SLCCNYTDHDPCPICTGEKRERTLLCIVEQPRDVVSLEKTREFKGLYHVLHGVISPLEGV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE + I L+ R+ + ++E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G
Sbjct: 120 GPEQLTISKLLGRL--EGVQEVVMAMNPTVEGEATALYLSRLLKPLGIKVTRIAHGLPVG 177
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ TI A+ R +
Sbjct: 178 GDLEYADEITIARALEGRRQI 198
>gi|262375229|ref|ZP_06068462.1| recombination protein RecR [Acinetobacter lwoffii SH145]
gi|262309483|gb|EEY90613.1| recombination protein RecR [Acinetobacter lwoffii SH145]
Length = 198
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 77/194 (39%), Positives = 123/194 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + L++ L +P GP+SA+R LH++ K + LA A+ N + CS+C
Sbjct: 1 MFSDRFDQLVQALRILPSVGPKSAQRMALHMIMKNREGAIGLAHALTEATNYIHECSVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + C IC RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+
Sbjct: 61 SLTEDEVCNICTSLDRDDELLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L+ R+ +++E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+
Sbjct: 121 IGIPYLLHRLANGQVKEVILATNATVEGQATAHYLVEASKHLPIQMTRIAQGVPQGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
Y+D T+ +A+ +R
Sbjct: 181 YVDSHTLSQAVHNR 194
>gi|303250208|ref|ZP_07336409.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|171855133|sp|A3MYE6|RECR_ACTP2 RecName: Full=Recombination protein recR
gi|302650919|gb|EFL81074.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 201
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 4 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 63
Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R + + VVE D+ A+E++ + Y VL G LSPLD IGP +I
Sbjct: 64 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+
Sbjct: 124 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 183
Query: 186 LDDGTIFEAIRSRT 199
+D T+ + R
Sbjct: 184 VDGTTLSHSFAGRR 197
>gi|320159546|ref|YP_004172770.1| recombination protein RecR [Anaerolinea thermophila UNI-1]
gi|319993399|dbj|BAJ62170.1| recombination protein RecR [Anaerolinea thermophila UNI-1]
Length = 201
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN- 65
+E LI R+PG GP++A R ++++ +++ LAEA+ + ++ C +C N
Sbjct: 5 PAPLEALITAFERLPGIGPKTASRLAFFILRQPDEVAQQLAEALLAVKSQTANCPVCFNI 64
Query: 66 -VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC D +RD S + VVED D+ +ER+ YHVL G L+P++ IGPE
Sbjct: 65 MLAGQERCQICADPRRDESQLCVVEDPLDVLVIERTGGFLGRYHVLQGVLNPIEGIGPEQ 124
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ LIER++ ++RE+I A + ++EG TA Y+ +L + V+ITRLA G+PMG +L+
Sbjct: 125 LRIRPLIERVQEGRVREVIIATNPSMEGDATALYLRQQLAPLGVRITRLARGLPMGGDLE 184
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R L
Sbjct: 185 YADQNTLLRALAGRQEL 201
>gi|332882336|ref|ZP_08449964.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679720|gb|EGJ52689.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 205
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ Q + +++ + + V C
Sbjct: 1 MNQQYPSVLLEKAVNEFAKLPGIGSKTAMRLVLHLLRQDVQAVESFGQSLITLKHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C N+ TD C IC D QRD S I VVE++ D+ A+E + +YHVLGG +SP+D +
Sbjct: 61 SVCHNISDTDVCEICSDMQRDHSTICVVENIQDVMAIENTHQYKGVYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ IQ+L+ER+E +RE+I A+S T+EG TT YI KL+ +I+ +A G+
Sbjct: 121 GPSDLQIQTLVERVEDGGVREVILALSPTMEGDTTNFYIYRKLENAAARISVIARGVAQN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +R V
Sbjct: 181 DELQYTDEVTLGRSIVNRVVF 201
>gi|126439985|ref|YP_001059239.1| recombination protein RecR [Burkholderia pseudomallei 668]
gi|126452036|ref|YP_001066506.1| recombination protein RecR [Burkholderia pseudomallei 1106a]
gi|134277460|ref|ZP_01764175.1| recombination protein RecR [Burkholderia pseudomallei 305]
gi|167815437|ref|ZP_02447117.1| recombination protein RecR [Burkholderia pseudomallei 91]
gi|167823847|ref|ZP_02455318.1| recombination protein RecR [Burkholderia pseudomallei 9]
gi|167845388|ref|ZP_02470896.1| recombination protein RecR [Burkholderia pseudomallei B7210]
gi|167893931|ref|ZP_02481333.1| recombination protein RecR [Burkholderia pseudomallei 7894]
gi|167902383|ref|ZP_02489588.1| recombination protein RecR [Burkholderia pseudomallei NCTC 13177]
gi|167918648|ref|ZP_02505739.1| recombination protein RecR [Burkholderia pseudomallei BCC215]
gi|217421382|ref|ZP_03452886.1| recombination protein RecR [Burkholderia pseudomallei 576]
gi|226197313|ref|ZP_03792890.1| recombination protein RecR [Burkholderia pseudomallei Pakistan 9]
gi|237812563|ref|YP_002897014.1| recombination protein RecR [Burkholderia pseudomallei MSHR346]
gi|242316061|ref|ZP_04815077.1| recombination protein RecR [Burkholderia pseudomallei 1106b]
gi|254179536|ref|ZP_04886135.1| recombination protein RecR [Burkholderia pseudomallei 1655]
gi|254197692|ref|ZP_04904114.1| recombination protein RecR [Burkholderia pseudomallei S13]
gi|166918737|sp|A3NA68|RECR_BURP6 RecName: Full=Recombination protein recR
gi|171855121|sp|A3NVY5|RECR_BURP0 RecName: Full=Recombination protein recR
gi|172045976|sp|Q63UU6|RECR_BURPS RecName: Full=Recombination protein recR
gi|126219478|gb|ABN82984.1| recombination protein RecR [Burkholderia pseudomallei 668]
gi|126225678|gb|ABN89218.1| recombination protein RecR [Burkholderia pseudomallei 1106a]
gi|134251110|gb|EBA51189.1| recombination protein RecR [Burkholderia pseudomallei 305]
gi|169654433|gb|EDS87126.1| recombination protein RecR [Burkholderia pseudomallei S13]
gi|184210076|gb|EDU07119.1| recombination protein RecR [Burkholderia pseudomallei 1655]
gi|217395124|gb|EEC35142.1| recombination protein RecR [Burkholderia pseudomallei 576]
gi|225930692|gb|EEH26702.1| recombination protein RecR [Burkholderia pseudomallei Pakistan 9]
gi|237506041|gb|ACQ98359.1| recombination protein RecR [Burkholderia pseudomallei MSHR346]
gi|242139300|gb|EES25702.1| recombination protein RecR [Burkholderia pseudomallei 1106b]
Length = 200
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 5 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 65 FTEAQVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 125 HFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 185 VDAGTIARAMLDRRTL 200
>gi|120554531|ref|YP_958882.1| recombination protein RecR [Marinobacter aquaeolei VT8]
gi|166221947|sp|A1U126|RECR_MARAV RecName: Full=Recombination protein recR
gi|120324380|gb|ABM18695.1| DNA replication and repair protein RecR [Marinobacter aquaeolei
VT8]
Length = 200
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 117/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ L++ L +PG G ++A+R HL+++ LA A+ + + V C C N
Sbjct: 3 FSPLVDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGTRLAAALNHAMDGVRRCDSCQN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T+ C IC +R + VVE +DL A+E++ Y VL G LSP+D +GPE+I
Sbjct: 63 FSDTEICQICEKPERRNGTLCVVESPSDLLAIEQAGDYKGSYFVLMGHLSPIDGVGPEEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI+ L++R+ + + ELI A + T+EG+ TAHYI D+L G ++ ITRLA+GIP+G EL Y
Sbjct: 123 GIERLLDRVRREGVTELILATNPTVEGEATAHYIADRLDGQNILITRLAHGIPVGGELGY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R R L
Sbjct: 183 VDGFTLTHAFRGRKPL 198
>gi|53723571|ref|YP_103019.1| recombination protein RecR [Burkholderia mallei ATCC 23344]
gi|67639897|ref|ZP_00438726.1| recombination protein RecR [Burkholderia mallei GB8 horse 4]
gi|121601240|ref|YP_993168.1| recombination protein RecR [Burkholderia mallei SAVP1]
gi|124385650|ref|YP_001026056.1| recombination protein RecR [Burkholderia mallei NCTC 10229]
gi|126450201|ref|YP_001080675.1| recombination protein RecR [Burkholderia mallei NCTC 10247]
gi|167738247|ref|ZP_02411021.1| recombination protein RecR [Burkholderia pseudomallei 14]
gi|167910623|ref|ZP_02497714.1| recombination protein RecR [Burkholderia pseudomallei 112]
gi|254178520|ref|ZP_04885175.1| recombination protein RecR [Burkholderia mallei ATCC 10399]
gi|254189072|ref|ZP_04895583.1| recombination protein RecR [Burkholderia pseudomallei Pasteur
52237]
gi|254199966|ref|ZP_04906332.1| recombination protein RecR [Burkholderia mallei FMH]
gi|254206299|ref|ZP_04912651.1| recombination protein RecR [Burkholderia mallei JHU]
gi|254260508|ref|ZP_04951562.1| recombination protein RecR [Burkholderia pseudomallei 1710a]
gi|254297414|ref|ZP_04964867.1| recombination protein RecR [Burkholderia pseudomallei 406e]
gi|254358287|ref|ZP_04974560.1| recombination protein RecR [Burkholderia mallei 2002721280]
gi|73621474|sp|Q62JV0|RECR_BURMA RecName: Full=Recombination protein recR
gi|166221926|sp|A3MK89|RECR_BURM7 RecName: Full=Recombination protein recR
gi|166221927|sp|A2S287|RECR_BURM9 RecName: Full=Recombination protein recR
gi|166221928|sp|A1V4L5|RECR_BURMS RecName: Full=Recombination protein recR
gi|172046644|sp|Q3JRN7|RECR_BURP1 RecName: Full=Recombination protein recR
gi|52426994|gb|AAU47587.1| recombination protein RecR [Burkholderia mallei ATCC 23344]
gi|121230050|gb|ABM52568.1| recombination protein RecR [Burkholderia mallei SAVP1]
gi|124293670|gb|ABN02939.1| recombination protein RecR [Burkholderia mallei NCTC 10229]
gi|126243071|gb|ABO06164.1| recombination protein RecR [Burkholderia mallei NCTC 10247]
gi|147749562|gb|EDK56636.1| recombination protein RecR [Burkholderia mallei FMH]
gi|147753742|gb|EDK60807.1| recombination protein RecR [Burkholderia mallei JHU]
gi|148027414|gb|EDK85435.1| recombination protein RecR [Burkholderia mallei 2002721280]
gi|157807148|gb|EDO84318.1| recombination protein RecR [Burkholderia pseudomallei 406e]
gi|157936751|gb|EDO92421.1| recombination protein RecR [Burkholderia pseudomallei Pasteur
52237]
gi|160699559|gb|EDP89529.1| recombination protein RecR [Burkholderia mallei ATCC 10399]
gi|238520509|gb|EEP83968.1| recombination protein RecR [Burkholderia mallei GB8 horse 4]
gi|254219197|gb|EET08581.1| recombination protein RecR [Burkholderia pseudomallei 1710a]
Length = 200
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 5 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 65 FTEAQICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 125 HFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 185 VDAGTIARAMLDRRTL 200
>gi|298294316|ref|YP_003696255.1| recombination protein RecR [Starkeya novella DSM 506]
gi|296930827|gb|ADH91636.1| recombination protein RecR [Starkeya novella DSM 506]
Length = 201
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 113/201 (56%), Positives = 158/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA LHL+KK+EQL+ PLA A + K+ C
Sbjct: 1 MPRAVAGPEIERLIQLLARVPGLGPRSARRAALHLIKKREQLMSPLASAFEEVLGKISTC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+D DPC+IC+D+ RD ++++VV DV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 RVCGNIDVRDPCSICVDETRDPTLLVVVADVSDLWALERAGAINARYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ +++LIER ++E++ A+ AT++GQTTAHY+ + L+ V +TRLA+G+P+G
Sbjct: 121 GPEDLNLKTLIERAHDGTVKEVLLALGATVDGQTTAHYVTEMLRDSGVAVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AI++RT L
Sbjct: 181 GELDYLDEGTLAAAIKARTSL 201
>gi|312137878|ref|YP_004005214.1| recombination protein recr [Rhodococcus equi 103S]
gi|325673355|ref|ZP_08153047.1| recombination protein R [Rhodococcus equi ATCC 33707]
gi|311887217|emb|CBH46526.1| recombination protein recR [Rhodococcus equi 103S]
gi|325555945|gb|EGD25615.1| recombination protein R [Rhodococcus equi ATCC 33707]
Length = 202
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 117/202 (57%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L + + + V C +CG
Sbjct: 1 MYEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPEIDRLQAVLQKVRDGVQFCVVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V + C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 TVSEEEKCRICSDPRRDRTMVCVVEEPKDVQAIERTREFKGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ RI ++ + E+I A EG+ TA Y++ L+ + ++RLA G+PM
Sbjct: 121 LRIRELLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADELTLGRALSGRRTL 202
>gi|55820693|ref|YP_139135.1| recombination protein RecR [Streptococcus thermophilus LMG 18311]
gi|55822584|ref|YP_141025.1| recombination protein RecR [Streptococcus thermophilus CNRZ1066]
gi|3024524|sp|P96053|RECR_STRTR RecName: Full=Recombination protein recR
gi|73621520|sp|Q5M0P4|RECR_STRT1 RecName: Full=Recombination protein recR
gi|73621521|sp|Q5M580|RECR_STRT2 RecName: Full=Recombination protein recR
gi|1685113|gb|AAC44615.1| RecM [Streptococcus thermophilus]
gi|55736678|gb|AAV60320.1| recombination protein [Streptococcus thermophilus LMG 18311]
gi|55738569|gb|AAV62210.1| recombination protein [Streptococcus thermophilus CNRZ1066]
Length = 198
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 62 RLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|326317364|ref|YP_004235036.1| recombination protein RecR [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374200|gb|ADX46469.1| recombination protein RecR [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 199
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 116/199 (58%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ L++ L R+PG G +SA+R HL++ Q L+ A+ + V C
Sbjct: 1 MASGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C + C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD I
Sbjct: 61 ARCHTFTEGEVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+DIG L+ER ++E+I A + T EG+ TAH + + LK + +TRLA G+P+G
Sbjct: 121 GPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
SEL+Y+D GTI A+ R
Sbjct: 181 SELEYVDLGTIAHALVDRR 199
>gi|259501363|ref|ZP_05744265.1| recombination protein R [Lactobacillus iners DSM 13335]
gi|302190916|ref|ZP_07267170.1| recombination protein RecR [Lactobacillus iners AB-1]
gi|309806646|ref|ZP_07700642.1| recombination protein RecR [Lactobacillus iners LactinV 03V1-b]
gi|259167216|gb|EEW51711.1| recombination protein R [Lactobacillus iners DSM 13335]
gi|308166951|gb|EFO69134.1| recombination protein RecR [Lactobacillus iners LactinV 03V1-b]
Length = 199
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN
Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I
Sbjct: 63 ITDTDPCEICSNTNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++
Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRISL 199
>gi|254490431|ref|ZP_05103617.1| recombination protein RecR [Methylophaga thiooxidans DMS010]
gi|224464175|gb|EEF80438.1| recombination protein RecR [Methylophaga thiooxydans DMS010]
Length = 199
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 119/195 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
G I+ LI L +PG GP+SA+R T HL+++ + LA+A+ + + V C C +
Sbjct: 5 GPSIDELISALRCLPGVGPKSAQRMTFHLLERNREGGAHLAKALMDALDNVQHCRRCRIL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+D C C D++R + +VE +D+ A+E++ Y VL G LSPLD IGPE +G
Sbjct: 65 CESDICIRCQDERRQQDQLCIVEMPSDVLAIEQATHYKGQYFVLSGHLSPLDGIGPEALG 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I LIE ++ K I E+I A + T+EG+ TAHYI + + +K+TRLA+GIP+G EL+++
Sbjct: 125 IPRLIEWLDEKTILEVILATNPTVEGEATAHYISELARERQIKVTRLAHGIPLGGELEFI 184
Query: 187 DDGTIFEAIRSRTVL 201
D GT+ A R +
Sbjct: 185 DSGTLSHAFSGRESI 199
>gi|167465483|ref|ZP_02330572.1| recombination protein RecR [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 178
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 73/177 (41%), Positives = 115/177 (64%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +R+PG GP++A R H+++ KE+ + A+A+ N+ + CS+C
Sbjct: 2 FYPEPISKLIDAFSRLPGVGPKTAGRLAFHVLRMKEEEVLDFAKALVNVKRNLHYCSVCC 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD S+I VV++ DL A+ER+K + YHVL G++SP++ IGP+
Sbjct: 62 NITDVDPCRICQDKSRDDSIICVVQEPKDLAAMERTKEFDGYYHVLHGAISPMEGIGPDQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
I I L++R+ +K++ELI A + IEG+ TA YI +KG +K+TR+A G+P+G
Sbjct: 122 IHIAELLKRLGDEKVQELILATNPNIEGEATAMYISRLVKGFGLKVTRIARGLPVGG 178
>gi|256852107|ref|ZP_05557494.1| recombination protein RecR [Lactobacillus jensenii 27-2-CHN]
gi|260661323|ref|ZP_05862236.1| recombination protein RecR [Lactobacillus jensenii 115-3-CHN]
gi|282934784|ref|ZP_06340022.1| recombination protein RecR [Lactobacillus jensenii 208-1]
gi|297205018|ref|ZP_06922414.1| recombination protein RecR [Lactobacillus jensenii JV-V16]
gi|256615519|gb|EEU20709.1| recombination protein RecR [Lactobacillus jensenii 27-2-CHN]
gi|260547778|gb|EEX23755.1| recombination protein RecR [Lactobacillus jensenii 115-3-CHN]
gi|281301147|gb|EFA93453.1| recombination protein RecR [Lactobacillus jensenii 208-1]
gi|297149596|gb|EFH29893.1| recombination protein RecR [Lactobacillus jensenii JV-V16]
Length = 199
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ ++PG G ++A R + + + A+++ ++ + CSICGN
Sbjct: 3 YPLPIARLIESYMKLPGIGEKTATRLAFYTLDMPADDVEQFAQSLKDVKTLLHQCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D RD S ++VVE D+ A E + +YHVL G LSP++ IGPEDI
Sbjct: 63 ITETDPCQICRDSNRDRSTVMVVEQPKDVMAFEEMGEYDGMYHVLHGVLSPMEGIGPEDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+SLI R + I+E+I A+++T EG++TA YI LK +K+TRLA G+ +G++++
Sbjct: 123 NIKSLITRLQKDDDIKEIIIALNSTPEGESTAMYIAKLLKPAGLKVTRLASGLAVGTDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRIDL 199
>gi|78484876|ref|YP_390801.1| recombination protein RecR [Thiomicrospira crunogena XCL-2]
gi|123555876|sp|Q31I96|RECR_THICR RecName: Full=Recombination protein recR
gi|78363162|gb|ABB41127.1| DNA replication and repair protein RecR [Thiomicrospira crunogena
XCL-2]
Length = 197
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 109/196 (55%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +P GP+SA+R L++ +Q LA A+ + KV C C
Sbjct: 1 MQSPVINELIDAFKLLPTIGPKSAQRLAYFLLQNHQQDGHRLASAIESALEKVGYCQQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C C + R + +VE D+ A+E+S Y VL G LSP+D IGP++
Sbjct: 61 NLSETEICGFCASKSRQTDQLCIVETPTDVVAIEQSGIYKGQYFVLMGHLSPIDGIGPDE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+ +I+ELI A + T+EG+ TAHYI ++ +TRLA GIP+G EL+
Sbjct: 121 LGLPILRDRLAQGEIQELILATNPTVEGEATAHYIQQMAIEFNISVTRLAQGIPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D GT+ +A R
Sbjct: 181 YIDSGTLGQAFAGRKA 196
>gi|253996276|ref|YP_003048340.1| recombination protein RecR [Methylotenera mobilis JLW8]
gi|253982955|gb|ACT47813.1| recombination protein RecR [Methylotenera mobilis JLW8]
Length = 200
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 114/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E LI L +PG GP+SA+R +L+++ Q LA A+ N V C +C
Sbjct: 3 NPPALEQLIDSLRCLPGVGPKSAQRMAYYLLQRDRQGANGLALALNNALQVVDHCKLCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C QRD +V+ VVE DL LE ++A + +Y VL G LSPLD IGP++I
Sbjct: 63 FSEQPICPLCESAQRDKTVLCVVEMPTDLIMLENTRAYSGMYFVLMGRLSPLDGIGPKEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LI+R + E+I A + T+EG TAHYI + L+ +K++R+A G+PMG E++Y
Sbjct: 123 HLDRLIKRANDGVVTEVILATNYTVEGDATAHYISELLRARGIKVSRIARGMPMGGEIEY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GT+ +A+ R
Sbjct: 183 VDTGTLAQAMLERRS 197
>gi|71906447|ref|YP_284034.1| recombination protein RecR [Dechloromonas aromatica RCB]
gi|123628051|sp|Q47HW7|RECR_DECAR RecName: Full=Recombination protein recR
gi|71846068|gb|AAZ45564.1| RecR protein [Dechloromonas aromatica RCB]
Length = 199
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 113/195 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +E+LI+ L +PG GP+SA+R HL+++ L +A+ + + C C
Sbjct: 1 MNPSGLESLIEALRCLPGIGPKSAQRMAYHLLQRDRPGAQRLGDAVLHALQAIRHCQRCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C C +RD ++ VVE D+ +E++ +Y+VL G +SPLD +GP++
Sbjct: 61 TFTEGDICERCASPRRDPELLCVVETPVDMNMMEQTLTYRGMYYVLMGKISPLDGVGPKE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L+ R ++E+I A + T EG+ TAHYI LK V +TR+A G+P+G EL+
Sbjct: 121 LGLDRLMTRALDGVVKEVILATNYTNEGEATAHYITAMLKPKGVGVTRIARGVPVGGELE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y+D GT+ +A+R R
Sbjct: 181 YVDSGTLAQALRERK 195
>gi|154250714|ref|YP_001411538.1| recombination protein RecR [Parvibaculum lavamentivorans DS-1]
gi|171769553|sp|A7HPP8|RECR_PARL1 RecName: Full=Recombination protein recR
gi|154154664|gb|ABS61881.1| recombination protein RecR [Parvibaculum lavamentivorans DS-1]
Length = 199
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 111/197 (56%), Positives = 150/197 (76%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+TG EIE LI +L+++PG GPRSARRA L L+KKKE LLGPLA AM + K +CS CG
Sbjct: 3 VTGPEIERLIALLSKLPGLGPRSARRAVLQLIKKKETLLGPLAAAMTDAMAKARICSACG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPCAIC D+ RD ++ +VE+V DLWALER+ A YHVLGG LS LD +GP+D
Sbjct: 63 NVDTQDPCAICADELRDPHILCIVEEVGDLWALERAGAHKGRYHVLGGVLSALDGVGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ER+ ++RE++ A++AT++GQTTAHYI D++ G+ + ++RLA+G+P+G ELD
Sbjct: 123 LNIGRLVERLTGGEVREVVLAMNATVDGQTTAHYITDRISGLGISVSRLAHGVPVGGELD 182
Query: 185 YLDDGTIFEAIRSRTVL 201
YLDDGT+ A++SR
Sbjct: 183 YLDDGTLAAAMKSRRPF 199
>gi|15828252|ref|NP_302515.1| recombination protein RecR [Mycobacterium leprae TN]
gi|221230729|ref|YP_002504145.1| recombination protein RecR [Mycobacterium leprae Br4923]
gi|6093948|sp|O69520|RECR_MYCLE RecName: Full=Recombination protein recR
gi|3150109|emb|CAA19161.1| recombination protein RecR [Mycobacterium leprae]
gi|13093945|emb|CAC31845.1| DNA repair protein [Mycobacterium leprae]
gi|219933836|emb|CAR72427.1| DNA repair protein [Mycobacterium leprae Br4923]
Length = 203
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI L ++PG GP+SA+R HL+ + Q + L + + + V C++CG
Sbjct: 1 MFEGPVQNLIDELGKLPGIGPKSAQRIAFHLLSVEPQDIDRLTAVLVKVRDDVRFCTVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDASV+ VVE+ D+ A+ER++ YHVLGG+L PL IGPE
Sbjct: 61 NVSDDERCRICSDTRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVGITEVIIATDPNTEGEATATYLVRMLRDMPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALTGRRTM 202
>gi|53719134|ref|YP_108120.1| recombination protein RecR [Burkholderia pseudomallei K96243]
gi|52209548|emb|CAH35501.1| recombination protein [Burkholderia pseudomallei K96243]
Length = 202
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 FTEAQVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 126
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 127 HFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 186
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 187 VDAGTIARAMLDRRTL 202
>gi|261493356|ref|ZP_05989882.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496622|ref|ZP_05993002.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307825|gb|EEY09148.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311000|gb|EEY12177.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 201
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENL++ L +PG GP+SA+R HL+++ L++A+ + + C C
Sbjct: 3 TSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALSKALNEAMSHIGHCKSCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE D+ A+E++ + Y VL G LSP+D IGP +
Sbjct: 63 FTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPIDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P+G L+
Sbjct: 123 IGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEMCRMYNVKATRIAHGVPVGGSLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 MVDGTTLSHSFAGRRDI 199
>gi|116072458|ref|ZP_01469725.1| RecR protein [Synechococcus sp. BL107]
gi|116064980|gb|EAU70739.1| RecR protein [Synechococcus sp. BL107]
Length = 192
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + E + A+A+ ++V C C ++
Sbjct: 1 MARLIDQFQRLPGIGPRTAQRLALHLLNQPEDQVQQFADALLAARSQVGQCQSCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC +R+ +I VV D DL ALER++ YHVLGG +SP+D IGPE + I+
Sbjct: 61 PLCEICSKPERNNGLICVVADSRDLLALERTREFKGRYHVLGGLISPMDGIGPELLHIKP 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI I E+I A++ ++EG TT+ Y+ +K ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LIERIAKDGITEVILALTPSVEGDTTSLYLARLIKPF-CPVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSRTVL 201
T+ A+ R +
Sbjct: 180 TLSRALEGRRPM 191
>gi|260435450|ref|ZP_05789420.1| recombination protein RecR [Synechococcus sp. WH 8109]
gi|260413324|gb|EEX06620.1| recombination protein RecR [Synechococcus sp. WH 8109]
Length = 219
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 117/195 (60%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C +
Sbjct: 25 FTKPLARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFH 84
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC + +R VI VV D DL ALER++ YHVLGG +SP+D IGPE +
Sbjct: 85 LSADPECEICRNPERRNGVICVVADSRDLLALERTREFQGRYHVLGGLISPMDGIGPELL 144
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y
Sbjct: 145 HVTELVQRITNEEISEVILALTPSVEGDTTSLYLGRLLKPF-CSVSRIAYGLPMGSELEY 203
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 204 ADEVTLSRALEGRRP 218
>gi|238027058|ref|YP_002911289.1| recombination protein RecR [Burkholderia glumae BGR1]
gi|237876252|gb|ACR28585.1| Recombination protein RecR [Burkholderia glumae BGR1]
Length = 198
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L +++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGQSLLFATQHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D +RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|315653114|ref|ZP_07906039.1| recombination protein R [Lactobacillus iners ATCC 55195]
gi|315489479|gb|EFU79116.1| recombination protein R [Lactobacillus iners ATCC 55195]
Length = 199
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN
Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I
Sbjct: 63 ITDTDPCEICSNDNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++
Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRISL 199
>gi|238762942|ref|ZP_04623910.1| hypothetical protein ykris0001_32540 [Yersinia kristensenii ATCC
33638]
gi|238698953|gb|EEP91702.1| hypothetical protein ykris0001_32540 [Yersinia kristensenii ATCC
33638]
Length = 201
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQDHCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEKRLETETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRNPI 199
>gi|76811798|ref|YP_333766.1| recombination protein RecR [Burkholderia pseudomallei 1710b]
gi|76581251|gb|ABA50726.1| recombination protein RecR [Burkholderia pseudomallei 1710b]
Length = 202
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 7 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 67 FTEAQICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 126
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 127 HFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 186
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 187 VDAGTIARAMLDRRTL 202
>gi|88705064|ref|ZP_01102776.1| Recombination protein recR [Congregibacter litoralis KT71]
gi|88700759|gb|EAQ97866.1| Recombination protein recR [Congregibacter litoralis KT71]
Length = 202
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 117/195 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R LHL+++ + L+ ++A+ +V C C N
Sbjct: 4 FSPAMDALIEALRCLPGVGPKSAQRMALHLLERNREGAATLSRSLADAVERVGRCQQCRN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC D +RDAS++ +VE D+ A+E++ Y VL G LSP+D IGPE+I
Sbjct: 64 LAEAVLCGICADTRRDASLLCIVETPGDILAIEQAGGYRGRYFVLMGHLSPIDGIGPEEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +++E+I A + T+EG+ TA+YI L+ + +++R+A+G+P+G EL+Y
Sbjct: 124 GLPLLEALARDGEVQEVILATNPTVEGEATAYYITRMLEPLIPRMSRIAHGVPLGGELEY 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R
Sbjct: 184 VDGSTLAHAFSGRQP 198
>gi|116627502|ref|YP_820121.1| recombination protein RecR [Streptococcus thermophilus LMD-9]
gi|122267900|sp|Q03LJ7|RECR_STRTD RecName: Full=Recombination protein recR
gi|116100779|gb|ABJ65925.1| DNA replication and repair protein RecR [Streptococcus thermophilus
LMD-9]
Length = 198
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 62 RLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLIARLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|260584504|ref|ZP_05852251.1| recombination protein RecR [Granulicatella elegans ATCC 700633]
gi|260158022|gb|EEW93091.1| recombination protein RecR [Granulicatella elegans ATCC 700633]
Length = 198
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 121/196 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I L+ ++PG G ++A R ++ E+ + A A+ + + +CS+CGN
Sbjct: 3 YPEPIARLMDSYMKLPGIGAKTAARLAFFSMEMPEEEVMNFANALISCKRDLTMCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD + I+VVED D+ +LER K LYHVL G LSP++ GP+DI
Sbjct: 63 ITQEDPCEICQDASRDRTKILVVEDSRDVMSLERMKEYKGLYHVLHGVLSPMEGTGPDDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ SLI+R++ + E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y
Sbjct: 123 NVASLIQRLQDPTVEEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+F+AI R L
Sbjct: 183 ADEMTLFKAIEGRREL 198
>gi|290580906|ref|YP_003485298.1| putative recombination protein [Streptococcus mutans NN2025]
gi|254997805|dbj|BAH88406.1| putative recombination protein [Streptococcus mutans NN2025]
Length = 199
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ ++PG G ++A R + + ++ + A+ + ++ C +CG
Sbjct: 2 LYPTPIAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAAKRELTYCFVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC D+ RD S ++VVED D+ A+E+ + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDDDPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
I ++SL+ R+ I E+I A +AT +G+ TA YI LK + +TRLA G+ +GS++
Sbjct: 122 INLKSLLTRLRDNSDIHEVIIATNATADGEATAMYISRVLKPAGITVTRLARGLAVGSDI 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ AI +RT L
Sbjct: 182 EYADEVTLLRAIENRTEL 199
>gi|323340132|ref|ZP_08080396.1| recombination protein R [Lactobacillus ruminis ATCC 25644]
gi|323092323|gb|EFZ34931.1| recombination protein R [Lactobacillus ruminis ATCC 25644]
Length = 199
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI R+PG G ++A R + ++ + ++A+ + + + CS+CGN
Sbjct: 3 YPEPIAKLIDSYMRLPGIGEKTAVRLAFFTIDMDKEDVSEFSKALVSAKSDLHYCSLCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ +DPC IC D+ R+ +IVVE V D+ A E+ + + LYHVL G LSP + IGPEDI
Sbjct: 63 ITESDPCVICADKTRNQHQVIVVEQVKDVMAFEKLRDYHGLYHVLHGVLSPSEGIGPEDI 122
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
++ LI R++ +I+E+I A +AT EG+ TA YI +K +K TRLA+G+ +GS+++
Sbjct: 123 NVKGLIRRLQANPEIKEVILATNATPEGEATAMYISRLIKPAGIKTTRLAHGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A+ R +
Sbjct: 183 YADEMTLFKAVEGRQEI 199
>gi|256840750|ref|ZP_05546258.1| recombination protein RecR [Parabacteroides sp. D13]
gi|256738022|gb|EEU51348.1| recombination protein RecR [Parabacteroides sp. D13]
Length = 208
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C
Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G
Sbjct: 121 GPSDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIINRTEF 201
>gi|163851065|ref|YP_001639108.1| recombination protein RecR [Methylobacterium extorquens PA1]
gi|218529895|ref|YP_002420711.1| recombination protein RecR [Methylobacterium chloromethanicum CM4]
gi|240138199|ref|YP_002962671.1| recombination protein recR [Methylobacterium extorquens AM1]
gi|254560759|ref|YP_003067854.1| recombination protein recR [Methylobacterium extorquens DM4]
gi|238687346|sp|A9W381|RECR_METEP RecName: Full=Recombination protein recR
gi|254790775|sp|B7KVW7|RECR_METC4 RecName: Full=Recombination protein recR
gi|163662670|gb|ABY30037.1| recombination protein RecR [Methylobacterium extorquens PA1]
gi|218522198|gb|ACK82783.1| recombination protein RecR [Methylobacterium chloromethanicum CM4]
gi|240008168|gb|ACS39394.1| recombination protein recR [Methylobacterium extorquens AM1]
gi|254268037|emb|CAX23908.1| recombination protein recR [Methylobacterium extorquens DM4]
Length = 201
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 149/201 (74%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM ++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRVAAERIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 RSCGNVDTSDPCTICRDETRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L+ER ++E+I A++AT++GQTTAHY+ + +K + +TRLA+G+P+G
Sbjct: 121 RPEHLTIARLVERAGEPGVKEIILALNATVDGQTTAHYVTESIKPFGLTVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLTAAIRSRTAF 201
>gi|309803527|ref|ZP_07697620.1| recombination protein RecR [Lactobacillus iners LactinV 11V1-d]
gi|309805424|ref|ZP_07699471.1| recombination protein RecR [Lactobacillus iners LactinV 09V1-c]
gi|309808230|ref|ZP_07702139.1| recombination protein RecR [Lactobacillus iners LactinV 01V1-a]
gi|312870933|ref|ZP_07731038.1| recombination protein RecR [Lactobacillus iners LEAF 3008A-a]
gi|312872172|ref|ZP_07732245.1| recombination protein RecR [Lactobacillus iners LEAF 2062A-h1]
gi|312873610|ref|ZP_07733657.1| recombination protein RecR [Lactobacillus iners LEAF 2052A-d]
gi|312875739|ref|ZP_07735734.1| recombination protein RecR [Lactobacillus iners LEAF 2053A-b]
gi|325912934|ref|ZP_08175308.1| recombination protein RecR [Lactobacillus iners UPII 60-B]
gi|329920994|ref|ZP_08277522.1| recombination protein RecR [Lactobacillus iners SPIN 1401G]
gi|308164411|gb|EFO66665.1| recombination protein RecR [Lactobacillus iners LactinV 11V1-d]
gi|308165242|gb|EFO67478.1| recombination protein RecR [Lactobacillus iners LactinV 09V1-c]
gi|308168518|gb|EFO70627.1| recombination protein RecR [Lactobacillus iners LactinV 01V1-a]
gi|311088731|gb|EFQ47180.1| recombination protein RecR [Lactobacillus iners LEAF 2053A-b]
gi|311090863|gb|EFQ49260.1| recombination protein RecR [Lactobacillus iners LEAF 2052A-d]
gi|311092256|gb|EFQ50627.1| recombination protein RecR [Lactobacillus iners LEAF 2062A-h1]
gi|311093623|gb|EFQ51962.1| recombination protein RecR [Lactobacillus iners LEAF 3008A-a]
gi|325477748|gb|EGC80886.1| recombination protein RecR [Lactobacillus iners UPII 60-B]
gi|328935270|gb|EGG31750.1| recombination protein RecR [Lactobacillus iners SPIN 1401G]
Length = 199
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN
Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I
Sbjct: 63 ITDTDPCEICSNANRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++
Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y + T+ A++ R L
Sbjct: 183 YANSITLKRAVQGRISL 199
>gi|255014909|ref|ZP_05287035.1| recombination protein RecR [Bacteroides sp. 2_1_7]
Length = 208
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C
Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
IC N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KICHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G
Sbjct: 121 GPSDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIINRTEF 201
>gi|27383225|ref|NP_774754.1| recombination protein RecR [Bradyrhizobium japonicum USDA 110]
gi|73621472|sp|Q89BN4|RECR_BRAJA RecName: Full=Recombination protein recR
gi|27356399|dbj|BAC53379.1| recombination protein [Bradyrhizobium japonicum USDA 110]
Length = 200
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 108/197 (54%), Positives = 151/197 (76%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+++LAR+PG GPRSARRA LHL+KK+E L+ PL+ A+ +KV +C CG
Sbjct: 4 VAGPEIERLVQLLARLPGLGPRSARRAALHLIKKREALMMPLSSALQVALDKVQVCKTCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT +PC +C D +RD ++I+VV DVADLWALER+ A YHVLG +LSPLD +GP+D
Sbjct: 64 NIDTQNPCTVCTDPKRDPAIIVVVADVADLWALERANATQGRYHVLGATLSPLDGVGPQD 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G ELD
Sbjct: 124 LTIDALVARAHAAEVHEVILALNATVDGQTTAHYITDLLQDANVKVTRLAHGVPVGGELD 183
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ A+R RT+
Sbjct: 184 YLDEGTLSAAMRQRTLF 200
>gi|73748422|ref|YP_307661.1| recombination protein RecR [Dehalococcoides sp. CBDB1]
gi|147669202|ref|YP_001214020.1| DNA replication and repair protein RecR [Dehalococcoides sp. BAV1]
gi|289432469|ref|YP_003462342.1| recombination protein RecR [Dehalococcoides sp. GT]
gi|123619528|sp|Q3ZWX3|RECR_DEHSC RecName: Full=Recombination protein recR
gi|189029359|sp|A5FRM7|RECR_DEHSB RecName: Full=Recombination protein recR
gi|73660138|emb|CAI82745.1| recombination protein RecR [Dehalococcoides sp. CBDB1]
gi|146270150|gb|ABQ17142.1| DNA replication and repair protein RecR [Dehalococcoides sp. BAV1]
gi|288946189|gb|ADC73886.1| recombination protein RecR [Dehalococcoides sp. GT]
Length = 204
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 114/192 (59%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI L ++PG GP+SA+R +L++ E + L++ + NI N++ C IC NV +
Sbjct: 13 VNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEDQVISLSDTIRNIKNQISQCRICCNVADS 72
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + +R+ + I VVE D+ ALE YHVL G++SP + I ++I I
Sbjct: 73 ELCPICQNTKRETNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNIRINE 132
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y DD
Sbjct: 133 LMVRLDNGQVEEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEYADDV 192
Query: 190 TIFEAIRSRTVL 201
T+ A+ R
Sbjct: 193 TLSRAMEGRQNF 204
>gi|89073486|ref|ZP_01160009.1| recombination protein RecR [Photobacterium sp. SKA34]
gi|90580019|ref|ZP_01235827.1| recombination protein RecR [Vibrio angustum S14]
gi|89050750|gb|EAR56231.1| recombination protein RecR [Photobacterium sp. SKA34]
gi|90438904|gb|EAS64087.1| recombination protein RecR [Vibrio angustum S14]
Length = 199
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ Q LA+A++ ++ C C
Sbjct: 3 TSHLLEHLMEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLADALSQAMTEIGHCRDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + +I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEDDVCAICENPRRQENGLICVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R++ + I E+I A + T+EG+ TAHYI + DV +R+A+G+P+G EL+
Sbjct: 123 IGLDRLENRLQHENISEIILATNPTVEGEATAHYIAELCHEYDVPASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLAGRQRL 199
>gi|315187316|gb|EFU21072.1| DNA replication and repair protein RecR [Spirochaeta thermophila
DSM 6578]
Length = 202
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 112/194 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E LI L+R+PG G +SA R L+K + L + + ++V CS CG
Sbjct: 2 NSLEVLIGHLSRLPGVGKKSASRIAHWLLKADRAFVQALGRLIMELPDRVKRCSRCGMYS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D RD I VVE +D+WA+E + LYHVL G+++PL+ + PED+ I
Sbjct: 62 DATLCEICSDPARDHRTICVVEQPSDVWAIEATHTYRGLYHVLHGAIAPLEGVRPEDLTI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ R+E + + E+I A + T+EG TTA Y++ LK K++RLA G+P+G +L+Y D
Sbjct: 122 DALVRRLEREPVEEVIIATNPTVEGDTTALYLVRLLKDWGGKVSRLALGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R +
Sbjct: 182 RVTLARALEGRQRI 195
>gi|322392709|ref|ZP_08066169.1| recombination protein R [Streptococcus peroris ATCC 700780]
gi|321144701|gb|EFX40102.1| recombination protein R [Streptococcus peroris ATCC 700780]
Length = 198
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDEDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|221135202|ref|ZP_03561505.1| recombination protein RecR [Glaciecola sp. HTCC2999]
Length = 199
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ +PG G +SA+R HL+++ + L+ ++ + V C C
Sbjct: 3 YSPLITELIESFKCLPGVGAKSAQRMAFHLLERNREGAMRLSHSLHDAMEHVTHCESCRT 62
Query: 66 VDTTDPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC R + +VE D+ A+E++ Y VL G LSP+D IGP +
Sbjct: 63 FTESKLCGICSSPARKQAQTLCIVESPQDILAIEQTSEFGGQYFVLMGHLSPIDGIGPAE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + I+E+I A + T+EG+ TAHYI DVK TR+A+G+P+G EL+
Sbjct: 123 IGLDILAQRLANENIQEVILATNPTVEGEATAHYIGQMCTKHDVKATRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A R +
Sbjct: 183 YIDGNTLTHAFSGRRSI 199
>gi|116750217|ref|YP_846904.1| recombination protein RecR [Syntrophobacter fumaroxidans MPOB]
gi|171460802|sp|A0LM17|RECR_SYNFM RecName: Full=Recombination protein recR
gi|116699281|gb|ABK18469.1| DNA replication and repair protein RecR [Syntrophobacter
fumaroxidans MPOB]
Length = 201
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +LI+ L+++PG G +SA R +HL+K LA+A+ + +++ C
Sbjct: 1 MVSSGYPPIMNDLIRRLSKLPGLGEKSATRIAMHLLKMSRTDAESLADAIRELRSRIRTC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C + + C+IC D RD I VVE ADL A+E+S A YHVL G L+PLD +
Sbjct: 61 SRCFHFTDAEECSICADPARDTGEICVVETTADLLAIEQSGAYRGRYHVLQGVLAPLDAV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I+ L+ERI+ + RE+I A + + EG+ TAHY++ LK +V+++R+AYGIPMG
Sbjct: 121 GPDDLRIRELLERIDREGAREVIIATNPSSEGEATAHYLLKLLKDRNVRVSRIAYGIPMG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L Y D T+ A++ R
Sbjct: 181 GDLKYTDRFTLERALKGRQAF 201
>gi|326800491|ref|YP_004318310.1| recombination protein recR [Sphingobacterium sp. 21]
gi|326551255|gb|ADZ79640.1| Recombination protein recR [Sphingobacterium sp. 21]
Length = 204
Score = 284 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 121/197 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + +R+PG G ++A R LHL+ + + ++A+ + +++C C++C
Sbjct: 2 NFSSKLLENAVNEFSRLPGIGQKTALRLVLHLLNQPADDVTKFSDALTKLKSEICYCAVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +RD +I VVED D+ A+E + N +YHVLGG +SP+D +GP
Sbjct: 62 HNIADEAICEICNAPKRDKGLICVVEDTRDVMAIENTNQFNGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLI R+ + E+I A+SAT+EG TT Y+ KLK +V+I+ +A GI G EL
Sbjct: 122 DLSIDSLINRLRENDVHEIILALSATMEGDTTIFYLYKKLKDFNVQISTIARGISFGGEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEVTLGRSIVTRVP 198
>gi|167837617|ref|ZP_02464500.1| recombination protein RecR [Burkholderia thailandensis MSMB43]
Length = 200
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 5 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 65 FTQAPICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 125 HFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 185 VDAGTIARAMLDRRTL 200
>gi|163846113|ref|YP_001634157.1| recombination protein RecR [Chloroflexus aurantiacus J-10-fl]
gi|222523849|ref|YP_002568319.1| recombination protein RecR [Chloroflexus sp. Y-400-fl]
gi|229890136|sp|A9WEA8|RECR_CHLAA RecName: Full=Recombination protein recR
gi|254790759|sp|B9LJ32|RECR_CHLSY RecName: Full=Recombination protein recR
gi|163667402|gb|ABY33768.1| recombination protein RecR [Chloroflexus aurantiacus J-10-fl]
gi|222447728|gb|ACM51994.1| recombination protein RecR [Chloroflexus sp. Y-400-fl]
Length = 204
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 118/200 (59%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
++ + LI+ A++PG GP++A R T +L++ + + LA+A+ ++ +V C
Sbjct: 5 TDQLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQVGYCR 64
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
C N+ + CAIC+D RD + I VVE+ D+ A+ER+ A LYHVL G ++PL+ I
Sbjct: 65 RCFNITVGELCAICLDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIY 124
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
ED+ I+ L+ R+ + ++E+I A + EG+ TA ++ L + V++TR A G+P G
Sbjct: 125 REDLKIEELLARVRSEPVQEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGG 184
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
+L++ D T+ A R L
Sbjct: 185 DLEWADPETLGSAFEGRREL 204
>gi|121607504|ref|YP_995311.1| recombination protein RecR [Verminephrobacter eiseniae EF01-2]
gi|171769526|sp|A1WF86|RECR_VEREI RecName: Full=Recombination protein recR
gi|121552144|gb|ABM56293.1| DNA replication and repair protein RecR [Verminephrobacter eiseniae
EF01-2]
Length = 196
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 114/194 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++ LI+ L R+PG G +SA+R HL++ LA+A+ + V C+ C
Sbjct: 3 SSNALDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGGQALAQALHDALGSVQHCARCHT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C+D RDA+ + VVE AD ALER+ A LY VL G LSPLD +GP++I
Sbjct: 63 FTEAETCRTCLDPGRDATRLCVVETPADQAALERTGAFKGLYFVLMGRLSPLDGVGPKEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+Q LI R ++E+I A + EG+ TAH I LK + +TRLA G+P+GSEL+Y
Sbjct: 123 GLQKLIARATEGGVQEVILATNFHAEGEATAHVISQALKRQGLHVTRLARGVPVGSELEY 182
Query: 186 LDDGTIFEAIRSRT 199
+D GTI A+ R
Sbjct: 183 VDLGTIAHALVDRR 196
>gi|229496601|ref|ZP_04390315.1| recombination protein RecR [Porphyromonas endodontalis ATCC 35406]
gi|229316498|gb|EEN82417.1| recombination protein RecR [Porphyromonas endodontalis ATCC 35406]
Length = 206
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 121/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K K +E + L+ +PG G ++A R L+++++ E L ++ + + C
Sbjct: 1 MTSKYPSKWLEKAVDQLSLLPGVGRKTALRLALYILRRPESFANLLGSSIIELRENIIYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ + C IC D RD I VVE++ D+ ++ER+ LYHVLGG +SP+D I
Sbjct: 61 ERCHNISDSPCCPICSDPSRDTQTICVVENIRDVMSIERTAQYKGLYHVLGGVISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P+D+ I+SL+ER+ ++I+E+I AIS T+EG+TT YI +L + V ++ L+ GI MG
Sbjct: 121 APQDLEIESLVERVPREQIKEVILAISPTMEGETTNFYIYKRLAPLGVHVSLLSRGIAMG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ A+R R+
Sbjct: 181 DELEYTDEVTLARALRDRSDF 201
>gi|149375205|ref|ZP_01892977.1| recombination protein RecR [Marinobacter algicola DG893]
gi|149360569|gb|EDM49021.1| recombination protein RecR [Marinobacter algicola DG893]
Length = 200
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 116/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ L++ L +PG G ++A+R HL+++ L++A+ V C C N
Sbjct: 3 FSPLVDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGSRLSDALDRAMTGVRRCESCQN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T C IC + +R + VVE +DL A+E++ Y VL G LSP+D +GPE+I
Sbjct: 63 FADTPTCNICENPERRTGTLCVVESPSDLLAIEQAGDYRGSYFVLMGHLSPIDGVGPEEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI+ L++RI + + ELI A + T+EG+ TAHYI D+L G D+ ITRLA+GIP+G EL Y
Sbjct: 123 GIERLLKRIHGEGVTELILATNPTVEGEATAHYIADRLDGRDILITRLAHGIPVGGELGY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R R L
Sbjct: 183 VDGFTLTHAFRGRKPL 198
>gi|148239861|ref|YP_001225248.1| recombination protein RecR [Synechococcus sp. WH 7803]
gi|172047796|sp|A5GLY6|RECR_SYNPW RecName: Full=Recombination protein recR
gi|147848400|emb|CAK23951.1| Recombination protein RecR [Synechococcus sp. WH 7803]
Length = 199
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 117/195 (60%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI R+PG GPR+A+R LHL+++ E+ + A+A+ +V C C +
Sbjct: 4 FTRPLARLIDQFERLPGIGPRTAQRLALHLLRQPEEQIRSFADALLAARTEVGHCQTCHH 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC + +R I VV D DL ALER++ + YHVLGG +SP+D IGP+ +
Sbjct: 64 LSAEPTCEICRNPERANGQICVVADSRDLLALERTREFSGHYHVLGGLISPMDGIGPDLL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL++R+ E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y
Sbjct: 124 QISSLVKRVAANNTEEVILALTPSVEGDTTSLYVARLLKPF-TRVSRIAYGLPVGSELEY 182
Query: 186 LDDGTIFEAIRSRTV 200
DD T+ A+ R
Sbjct: 183 ADDVTLSRALEGRRA 197
>gi|59712292|ref|YP_205068.1| recombination protein RecR [Vibrio fischeri ES114]
gi|197334321|ref|YP_002156504.1| recombination protein RecR [Vibrio fischeri MJ11]
gi|71648824|sp|Q5E466|RECR_VIBF1 RecName: Full=Recombination protein recR
gi|226726313|sp|B5FFM4|RECR_VIBFM RecName: Full=Recombination protein recR
gi|59480393|gb|AAW86180.1| gap repair protein [Vibrio fischeri ES114]
gi|197315811|gb|ACH65258.1| recombination protein RecR [Vibrio fischeri MJ11]
Length = 200
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ Q LA+A++ +++ CS C
Sbjct: 3 TSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSQAMSEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC++ +R AS + +VE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDTCAICLNPKRQASGEMCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+PMG EL+
Sbjct: 123 IGLDLLDHRLNRGDIKEVILATNPTVEGEATAHYIAELCQEHQVPASRIAHGVPMGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ +I R L
Sbjct: 183 LVDGTTLSHSILGRQKL 199
>gi|320538820|ref|ZP_08038496.1| gap repair protein [Serratia symbiotica str. Tucson]
gi|320030980|gb|EFW12983.1| gap repair protein [Serratia symbiotica str. Tucson]
Length = 202
Score = 284 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLELLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDICTICANPRRQKNGQICVVETPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E ++I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+
Sbjct: 123 IGLDRLGQRLEKERITEIILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHAI 199
>gi|330996287|ref|ZP_08320172.1| recombination protein RecR [Paraprevotella xylaniphila YIT 11841]
gi|329573479|gb|EGG55086.1| recombination protein RecR [Paraprevotella xylaniphila YIT 11841]
Length = 205
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + A++PG G ++A R LHL+++ Q + +++ + + V C
Sbjct: 1 MNQQYPSVLLEKAVNEFAKLPGIGSKTAMRLVLHLLRQDVQAVESFGQSLITLKHDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SIC N+ TD C IC D QRD S I VVE++ D+ A+E + +YHVLGG +SP+D +
Sbjct: 61 SICHNISDTDVCEICSDMQRDHSTICVVENIQDVMAIENTHQYKGVYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ +Q+L+ER+E +RE+I A+S T+EG TT YI KL+ + +I+ +A G+
Sbjct: 121 GPSDLQMQTLVERVEDGGVREVILALSPTMEGDTTNFYIYRKLENVAARISVIARGVAQN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL Y D+ T+ +I +R V
Sbjct: 181 DELQYTDEVTLGRSIVNRVVF 201
>gi|300312972|ref|YP_003777064.1| recombinational DNA repair protein [Herbaspirillum seropedicae
SmR1]
gi|300075757|gb|ADJ65156.1| rocombinational DNA repair protein [Herbaspirillum seropedicae
SmR1]
Length = 198
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 110/195 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L L R+PG GP++A+R HL++ L++++A + + C++C
Sbjct: 3 TPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C C D QRD + + VVE +D +E++ LY VL G LSPLD IGP DI
Sbjct: 63 FTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPRDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ LI R + E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 123 HLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GTI A+ R
Sbjct: 183 VDAGTIARAMLDRRT 197
>gi|291006687|ref|ZP_06564660.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 2338]
gi|172044197|sp|A4F6D1|RECR_SACEN RecName: Full=Recombination protein recR
Length = 198
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + + L E + + V C ICG
Sbjct: 1 MYEGPVQDLIDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSEEPTCRICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ ++ L+ RI +I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L
Sbjct: 121 LRVRELLTRIGRDEITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDL 180
Query: 184 DYLDDGTIFEAIRSRTV 200
++ D+ T+ A+ R
Sbjct: 181 EFADELTLGRALSGRRA 197
>gi|238791474|ref|ZP_04635112.1| hypothetical protein yinte0001_26260 [Yersinia intermedia ATCC
29909]
gi|238729090|gb|EEQ20606.1| hypothetical protein yinte0001_26260 [Yersinia intermedia ATCC
29909]
Length = 201
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQDRCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEKRLETETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRNPI 199
>gi|262402601|ref|ZP_06079162.1| recombination protein RecR [Vibrio sp. RC586]
gi|262351383|gb|EEZ00516.1| recombination protein RecR [Vibrio sp. RC586]
Length = 195
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRTFTEQ 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+
Sbjct: 62 DICHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D
Sbjct: 122 TLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDG 181
Query: 189 GTIFEAIRSRTVL 201
T+ ++ R L
Sbjct: 182 TTLSHSLLGRHKL 194
>gi|21673635|ref|NP_661700.1| recombination/replication protein RecR [Chlorobium tepidum TLS]
gi|25091147|sp|Q8KE84|RECR_CHLTE RecName: Full=Recombination protein recR
gi|21646751|gb|AAM72042.1| recombination/replication protein RecR [Chlorobium tepidum TLS]
Length = 204
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + +E LI+ A++PG G ++A+R T+H++ ++ + LA A+ ++ KV CS+C
Sbjct: 2 RYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLHERRSEVEKLASALIDVKEKVIRCSVC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
N+ DPC IC RD SVI VVE ++ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNITDLGVDPCHICTSAGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIE---VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ LI RI +RE++ A++ T+EG+TT+ YI LK + + +TR+A GIP
Sbjct: 122 PDDIKVRELIARIGVDSTGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 VGAELEFIDEATLSRAMEGRSAI 204
>gi|256822250|ref|YP_003146213.1| recombination protein RecR [Kangiella koreensis DSM 16069]
gi|256795789|gb|ACV26445.1| recombination protein RecR [Kangiella koreensis DSM 16069]
Length = 199
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ LI+ +PG G +SA+R L+++ + LAEA+ N V CS C
Sbjct: 1 MQSPLIKKLIEAFTCLPGVGNKSAQRMAYFLLERNREGGEQLAEALVAAMNGVKHCSRCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C IC Q RD S++ +VE AD++A+E + + Y VL G LSPLD IGPED
Sbjct: 61 DFTEDDLCGICNSQARDNSLLCIVESPADVFAIESTASFKGKYFVLMGHLSPLDGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ++ +K E+I A ++T+EG+ TAH+I + LK +V ++R+A G+P+G EL+
Sbjct: 121 LGLDQLKRLVDEEKPVEIILATNSTVEGEATAHFISEMLKKNEVVLSRIASGVPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D GT+ ++ R
Sbjct: 181 YIDGGTLMHSLSGRQP 196
>gi|109899202|ref|YP_662457.1| recombination protein RecR [Pseudoalteromonas atlantica T6c]
gi|122971763|sp|Q15RT5|RECR_PSEA6 RecName: Full=Recombination protein recR
gi|109701483|gb|ABG41403.1| recombination protein RecR [Pseudoalteromonas atlantica T6c]
Length = 200
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I LI +PG GP+SA+R HL+++ L++ + N V C C
Sbjct: 4 SPLILELINAFKVLPGVGPKSAQRMAFHLLERNRSGALQLSQVLHNAMEHVGHCKQCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
++ C IC +R +A + VVE D+ A+E++ LY VL G LSP+D IGP +I
Sbjct: 64 TESELCEICAHPRRSEAGTLCVVESPQDVVAIEQTAEFKGLYFVLMGHLSPIDGIGPSEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L ++ K + E+I A + T+EG+ TAHYI D++ TRLA+G+P+G EL+Y
Sbjct: 124 GLDELANLLDSKDLTEVILATNPTVEGEATAHYIGQMCSARDIQATRLAHGMPVGGELEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R L
Sbjct: 184 VDGNTLTHAFVGRRSL 199
>gi|307729578|ref|YP_003906802.1| recombination protein RecR [Burkholderia sp. CCGE1003]
gi|307584113|gb|ADN57511.1| recombination protein RecR [Burkholderia sp. CCGE1003]
Length = 198
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ L A+ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQVCEVCLDPERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLTVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|160900333|ref|YP_001565915.1| recombination protein RecR [Delftia acidovorans SPH-1]
gi|160365917|gb|ABX37530.1| recombination protein RecR [Delftia acidovorans SPH-1]
Length = 196
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 82/192 (42%), Positives = 117/192 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ V C C
Sbjct: 5 QSLDGLIEALRRLPGVGIKSAQRMAFHLLQRDQDGARQLARALTTAVESVTHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D+ RDA+ + VVE AD+ A+ER+ A Y+VL G LSPLD IGP D+ +
Sbjct: 65 EGRICSICQDEGRDAARLCVVEAPADMAAMERTGAYQGYYYVLMGRLSPLDGIGPRDLNL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ER K++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 SSLLERAGDGKVQEVILATSFTAEGEATAHAISEALKARGIHVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 185 LGTIAHALVDRR 196
>gi|258647975|ref|ZP_05735444.1| recombination protein RecR [Prevotella tannerae ATCC 51259]
gi|260851816|gb|EEX71685.1| recombination protein RecR [Prevotella tannerae ATCC 51259]
Length = 203
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ K +E + ++PG G R+A R LHL+K+ + + AE++ + K+ C
Sbjct: 1 MNEQYPSKHLERALNEFTKLPGIGRRTALRLVLHLLKQDKAYVNSFAESLIAVKEKIHYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+IC N+ TD C IC RD SV+ VVE+++ + ++E + A LYHVLGG +SP+D +
Sbjct: 61 NICHNISDTDICEICASPLRDQSVVCVVENISGVLSIENTGAFRGLYHVLGGVISPMDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SLI+R+ +++E+IFA++ T+EG TT +I KL +VK+T LA G+ +G
Sbjct: 121 GPSDLEIDSLIDRVASGEVKEIIFALNPTMEGDTTIFFIQRKLAQYNVKLTTLARGVSVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I R +
Sbjct: 181 EELEYTDEITLGRSITERIEI 201
>gi|322388817|ref|ZP_08062414.1| recombination protein R [Streptococcus infantis ATCC 700779]
gi|321140436|gb|EFX35944.1| recombination protein R [Streptococcus infantis ATCC 700779]
Length = 198
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYISRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|296166809|ref|ZP_06849227.1| recombination protein R [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897825|gb|EFG77413.1| recombination protein R [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 203
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAALGKVRDGVRFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSDNERCRICSDPRRDGSLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDIAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|193214870|ref|YP_001996069.1| recombination protein RecR [Chloroherpeton thalassium ATCC 35110]
gi|229890141|sp|B3QYJ4|RECR_CHLT3 RecName: Full=Recombination protein recR
gi|193088347|gb|ACF13622.1| recombination protein RecR [Chloroherpeton thalassium ATCC 35110]
Length = 205
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 84/204 (41%), Positives = 132/204 (64%), Gaps = 6/204 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T +E LI A++PG G ++A+R T+ ++ ++++ + LA+A+ ++ NKV CS+C
Sbjct: 2 RYTSHAVETLIDEFAKLPGIGRKTAQRLTMFILHEEKEKVESLAQALLDLKNKVSYCSLC 61
Query: 64 GNVDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC IC +RD V+ VVE D+ A E++ N LYHVL G +SPLD +G
Sbjct: 62 QNVTDKEIDPCNICTSVKRDKRVVCVVEAPNDVLAFEKTNQYNGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
P+D+ ++ LI R+ I+E+I AI+ T+EG+TT Y+ LK + VK+TR+A GI
Sbjct: 122 PDDLKVKELIHRLSETDPETSIKEVILAINPTVEGETTVLYLSKLLKPLGVKVTRIARGI 181
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+EL+Y+DD T+ A+ R+ L
Sbjct: 182 PIGTELEYIDDATLTRALEGRSEL 205
>gi|56750195|ref|YP_170896.1| recombination protein RecR [Synechococcus elongatus PCC 6301]
gi|73621523|sp|Q5N5P2|RECR_SYNP6 RecName: Full=Recombination protein recR
gi|172046613|sp|Q31NH0|RECR_SYNE7 RecName: Full=Recombination protein recR
gi|56685154|dbj|BAD78376.1| recombination protein RecR [Synechococcus elongatus PCC 6301]
Length = 199
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L ++PG GP++A+R LHL+++ E + AEA+ +V C C
Sbjct: 3 VYTRPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + D C IC D +RDA I VV D D+ ALE+++ LYHVLGG +SP+D IGPE
Sbjct: 63 HLSSEDLCNICRDPKRDAQTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ +Q+L+ R+ ++ +E+I AIS ++EG+TT Y+ LK ++TR+A+G+PMG +L+
Sbjct: 123 LTVQALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 182 YADEVTLARALEGRRDL 198
>gi|323526147|ref|YP_004228300.1| recombination protein RecR [Burkholderia sp. CCGE1001]
gi|323383149|gb|ADX55240.1| recombination protein RecR [Burkholderia sp. CCGE1001]
Length = 198
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 108/195 (55%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L A+ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGADKLGRALLFATEHLRHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D +RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDPERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|257069943|ref|YP_003156198.1| DNA replication and repair protein RecR [Brachybacterium faecium
DSM 4810]
gi|256560761|gb|ACU86608.1| DNA replication and repair protein RecR [Brachybacterium faecium
DSM 4810]
Length = 197
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 114/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + + LAE + + + V C ICG
Sbjct: 1 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLDADDAAVRRLAEVLIQVKDTVRFCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +R VI VVE+ D+ A+E+ + YHVLGG++ P+ +GP D
Sbjct: 61 NVSAEEKCRICTDPRRTDEVICVVEESKDIVAIEKIREFKGRYHVLGGAIDPIGGVGPND 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+ + E+I A+ IEG+ TA Y+ L +++ +TRLA G+P+G +LD
Sbjct: 121 LRITQLMSRLGSGETTEVILALDPNIEGEATAAYLSRLLGPMELTVTRLASGLPVGGDLD 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ A R
Sbjct: 181 YADEMTLGRAFLGRRS 196
>gi|28898951|ref|NP_798556.1| recombination protein RecR [Vibrio parahaemolyticus RIMD 2210633]
gi|153838680|ref|ZP_01991347.1| recombination protein RecR [Vibrio parahaemolyticus AQ3810]
gi|260364435|ref|ZP_05777064.1| recombination protein RecR [Vibrio parahaemolyticus K5030]
gi|260878851|ref|ZP_05891206.1| recombination protein RecR [Vibrio parahaemolyticus AN-5034]
gi|260896227|ref|ZP_05904723.1| recombination protein RecR [Vibrio parahaemolyticus Peru-466]
gi|260900004|ref|ZP_05908399.1| recombination protein RecR [Vibrio parahaemolyticus AQ4037]
gi|31076898|sp|Q87MQ4|RECR_VIBPA RecName: Full=Recombination protein recR
gi|28807170|dbj|BAC60440.1| recombination protein RecR [Vibrio parahaemolyticus RIMD 2210633]
gi|149747900|gb|EDM58772.1| recombination protein RecR [Vibrio parahaemolyticus AQ3810]
gi|308088845|gb|EFO38540.1| recombination protein RecR [Vibrio parahaemolyticus Peru-466]
gi|308094239|gb|EFO43934.1| recombination protein RecR [Vibrio parahaemolyticus AN-5034]
gi|308107412|gb|EFO44952.1| recombination protein RecR [Vibrio parahaemolyticus AQ4037]
gi|308114583|gb|EFO52123.1| recombination protein RecR [Vibrio parahaemolyticus K5030]
gi|328474509|gb|EGF45314.1| recombination protein RecR [Vibrio parahaemolyticus 10329]
Length = 199
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C
Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCAECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I E+I A + T+EG+ TAHYI + + V+ +R+A+G+P+G EL+
Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCREHQVEASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 LVDGTTLSHSLLGRHKI 199
>gi|127513161|ref|YP_001094358.1| recombination protein RecR [Shewanella loihica PV-4]
gi|166221964|sp|A3QF51|RECR_SHELP RecName: Full=Recombination protein recR
gi|126638456|gb|ABO24099.1| recombination protein RecR [Shewanella loihica PV-4]
Length = 199
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA+A+++ + V CS C
Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGHKLAQALSSAMSDVGHCSSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R ++ +I VVE AD+ A+E + Y VL G LSPLD +GP++
Sbjct: 63 FTEESLCPICASSRRGNSDLICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + ++ ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+
Sbjct: 123 LGLSLLETHLASGEVSELILATNPTVEGDATAHFIADMAKQHEVNVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRIPL 199
>gi|148543565|ref|YP_001270935.1| recombination protein RecR [Lactobacillus reuteri DSM 20016]
gi|184152972|ref|YP_001841313.1| recombination protein RecR [Lactobacillus reuteri JCM 1112]
gi|194468112|ref|ZP_03074098.1| recombination protein RecR [Lactobacillus reuteri 100-23]
gi|227363475|ref|ZP_03847597.1| recombination protein RecR [Lactobacillus reuteri MM2-3]
gi|325681915|ref|ZP_08161433.1| recombination protein R [Lactobacillus reuteri MM4-1A]
gi|172048231|sp|A5VIC4|RECR_LACRD RecName: Full=Recombination protein recR
gi|229470338|sp|B2G5V1|RECR_LACRJ RecName: Full=Recombination protein recR
gi|148530599|gb|ABQ82598.1| DNA replication and repair protein RecR [Lactobacillus reuteri DSM
20016]
gi|183224316|dbj|BAG24833.1| recombination protein RecR [Lactobacillus reuteri JCM 1112]
gi|194452965|gb|EDX41863.1| recombination protein RecR [Lactobacillus reuteri 100-23]
gi|227071489|gb|EEI09790.1| recombination protein RecR [Lactobacillus reuteri MM2-3]
gi|324978559|gb|EGC15508.1| recombination protein R [Lactobacillus reuteri MM4-1A]
Length = 200
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN
Sbjct: 4 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLSMQEDDVTNFAKSLLSAKRDLHNCSICGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE D+ A+ER + LYHVL G +SP+ GPEDI
Sbjct: 64 ITEDDPCPICRDKTRDHSQILVVEQSQDVMAMERMHEYHGLYHVLHGVISPVAGTGPEDI 123
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R+ + +++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D
Sbjct: 124 NITSLLKRLKKDDEVKEIIIATNASSDGELTAGYLAKLIKPAGIKVTRLAHGLSVGADID 183
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 184 YADEMTLFKAVQGRTEM 200
>gi|257452755|ref|ZP_05618054.1| recombination protein recR [Fusobacterium sp. 3_1_5R]
gi|257466876|ref|ZP_05631187.1| recombination protein recR [Fusobacterium gonidiaformans ATCC
25563]
gi|315918024|ref|ZP_07914264.1| recombination protein recR [Fusobacterium gonidiaformans ATCC
25563]
gi|317059296|ref|ZP_07923781.1| recombination protein recR [Fusobacterium sp. 3_1_5R]
gi|313684972|gb|EFS21807.1| recombination protein recR [Fusobacterium sp. 3_1_5R]
gi|313691899|gb|EFS28734.1| recombination protein recR [Fusobacterium gonidiaformans ATCC
25563]
Length = 197
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 120/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ EQ + +A+ +I K+ C +CG
Sbjct: 1 MAIKSLEKLIDQFHKLPGIGRKSATRLGFHILDYSEQEIDDFIQALEDIKGKIHRCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC D+ RD I VVED D+ +LE++ LYH+LGG L+PL I P+
Sbjct: 61 DYCEEELCPICSDEARDHKSICVVEDSRDVVSLEKTGKYRGLYHILGGKLAPLQGITPDK 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++SL+ER+ + ++E+I A++ +EG+TTA Y++ LK DVKIT++A GIPMG L+
Sbjct: 121 LNLKSLLERLAKEDVQEIILALNPDLEGETTAMYLVKLLKPFDVKITKIASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D TI A+ +R
Sbjct: 181 FADSATIARALDARQE 196
>gi|227894600|ref|ZP_04012405.1| recombinational DNA repair protein [Lactobacillus ultunensis DSM
16047]
gi|227863591|gb|EEJ71012.1| recombinational DNA repair protein [Lactobacillus ultunensis DSM
16047]
Length = 185
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 18 ARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICID 77
++PG G ++A R + + ++ + ++A+ + + C ICGN+ D C IC +
Sbjct: 1 MKLPGIGEKTATRLAFYTMDMPQEDVEDFSKALIQVKKDIHQCPICGNITEKDVCDICSN 60
Query: 78 QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV- 136
RD + I+VVE DL A E N LYHVL G LSP+D IGPE+I I+SLI R++
Sbjct: 61 PNRDQTTIMVVEQPKDLMAFEEMGEYNGLYHVLHGVLSPMDGIGPEEINIKSLITRLQKH 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y + T+ A++
Sbjct: 121 DEVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANSITLKRAVQ 180
Query: 197 SRTVL 201
RT L
Sbjct: 181 GRTAL 185
>gi|81300178|ref|YP_400386.1| recombination protein RecR [Synechococcus elongatus PCC 7942]
gi|81169059|gb|ABB57399.1| DNA replication and repair protein RecR [Synechococcus elongatus
PCC 7942]
Length = 211
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ L ++PG GP++A+R LHL+++ E + AEA+ +V C C
Sbjct: 15 VYTRPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCF 74
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ + D C IC D +RDA I VV D D+ ALE+++ LYHVLGG +SP+D IGPE
Sbjct: 75 HLSSEDLCNICRDPKRDAQTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQ 134
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ +Q+L+ R+ ++ +E+I AIS ++EG+TT Y+ LK ++TR+A+G+PMG +L+
Sbjct: 135 LTVQALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLE 193
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A+ R L
Sbjct: 194 YADEVTLARALEGRRDL 210
>gi|120611314|ref|YP_970992.1| recombination protein RecR [Acidovorax citrulli AAC00-1]
gi|171769180|sp|A1TQI0|RECR_ACIAC RecName: Full=Recombination protein recR
gi|120589778|gb|ABM33218.1| recombination protein RecR [Acidovorax citrulli AAC00-1]
Length = 199
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 116/199 (58%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ L++ L R+PG G +SA+R HL++ Q L+ A+ + V C
Sbjct: 1 MAPGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C + C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD I
Sbjct: 61 ARCHTFTEGEVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+DIG L+ER ++E+I A + T EG+ TAH + + LK + +TRLA G+P+G
Sbjct: 121 GPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
SEL+Y+D GTI A+ R
Sbjct: 181 SELEYVDLGTIAHALVDRR 199
>gi|150008070|ref|YP_001302813.1| recombination protein RecR [Parabacteroides distasonis ATCC 8503]
gi|262381356|ref|ZP_06074494.1| recombination protein RecR [Bacteroides sp. 2_1_33B]
gi|298376576|ref|ZP_06986531.1| recombination protein RecR [Bacteroides sp. 3_1_19]
gi|301309833|ref|ZP_07215772.1| recombination protein RecR [Bacteroides sp. 20_3]
gi|166221950|sp|A6LBX7|RECR_PARD8 RecName: Full=Recombination protein recR
gi|149936494|gb|ABR43191.1| recombination protein RecR [Parabacteroides distasonis ATCC 8503]
gi|262296533|gb|EEY84463.1| recombination protein RecR [Bacteroides sp. 2_1_33B]
gi|298266454|gb|EFI08112.1| recombination protein RecR [Bacteroides sp. 3_1_19]
gi|300831407|gb|EFK62038.1| recombination protein RecR [Bacteroides sp. 20_3]
Length = 208
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C
Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G
Sbjct: 121 GPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIINRTEF 201
>gi|83720219|ref|YP_442742.1| recombination protein RecR [Burkholderia thailandensis E264]
gi|167581689|ref|ZP_02374563.1| recombination protein RecR [Burkholderia thailandensis TXDOH]
gi|167619806|ref|ZP_02388437.1| recombination protein RecR [Burkholderia thailandensis Bt4]
gi|257138953|ref|ZP_05587215.1| recombination protein RecR [Burkholderia thailandensis E264]
gi|123536826|sp|Q2SWF7|RECR_BURTA RecName: Full=Recombination protein recR
gi|83654044|gb|ABC38107.1| recombination protein RecR [Burkholderia thailandensis E264]
Length = 200
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 5 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 65 FTEAQVCEVCCDPERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 125 HFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D GTI A+ R L
Sbjct: 185 VDAGTIARAMLDRRTL 200
>gi|85717150|ref|ZP_01048109.1| recombination protein RecR [Nitrobacter sp. Nb-311A]
gi|85696041|gb|EAQ33940.1| recombination protein RecR [Nitrobacter sp. Nb-311A]
Length = 201
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +TG EI+ LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C
Sbjct: 1 MPTAVTGPEIDRLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIDRILVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+DT PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 61 ETCGNIDTRSPCTVCTDVRRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 121 GPQDLTIDALVSRAHDSRVTEIVLALNATVDGQTTAHYITDLLGDANVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT+
Sbjct: 181 GELDYLDEGTLSAAMRQRTLF 201
>gi|209694646|ref|YP_002262574.1| recombination protein RecR [Aliivibrio salmonicida LFI1238]
gi|226726301|sp|B6EJ44|RECR_ALISL RecName: Full=Recombination protein recR
gi|208008597|emb|CAQ78772.1| recombination protein RecR [Aliivibrio salmonicida LFI1238]
Length = 200
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ Q LA+A++ +++ CS C
Sbjct: 3 TSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSECRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC++ +R + +VE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEDTCAICLNPKRQMNGELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+PMG EL+
Sbjct: 123 IGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEICQEHHVSASRIAHGVPMGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ +I R L
Sbjct: 183 LVDGTTLSHSILGRQKL 199
>gi|262276242|ref|ZP_06054051.1| recombination protein RecR [Grimontia hollisae CIP 101886]
gi|262220050|gb|EEY71366.1| recombination protein RecR [Grimontia hollisae CIP 101886]
Length = 200
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L++ L +PG GP+SA+R HL+++ Q L+EA+ + + C C
Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFHLLQRNRQGGVKLSEALLSAMTDIGHCEKCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D
Sbjct: 63 FTEEEECAICANPRRQENGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + I ELI A + T+EG+ TAHYI + V +R+A+G+PMG EL+
Sbjct: 123 IGLDLLEKRLSSESISELILATNPTVEGEATAHYISELCSEHGVIASRIAHGVPMGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ +I R L
Sbjct: 183 LVDGTTLSHSIIGRHRL 199
>gi|78184972|ref|YP_377407.1| recombination protein RecR [Synechococcus sp. CC9902]
gi|123581335|sp|Q3AX77|RECR_SYNS9 RecName: Full=Recombination protein recR
gi|78169266|gb|ABB26363.1| DNA replication and repair protein RecR [Synechococcus sp. CC9902]
Length = 192
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + E + A+A+ ++V C C ++
Sbjct: 1 MARLIDQFQRLPGIGPRTAQRLALHLLNQPEDQVQQFADALLAARSQVGQCQSCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC +R+ +I VV D DL ALER++ YHVLGG +SP+D IGPE + I+
Sbjct: 61 PLCEICSKPERNNGLICVVADSRDLLALERTREFKGQYHVLGGLISPMDGIGPELLHIKP 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI I E+I A++ ++EG TT+ Y+ +K ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LIERIAKDGISEVILALTPSVEGDTTSLYLARLMKPF-CPVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSRTVL 201
T+ A+ R +
Sbjct: 180 TLSRALEGRRPM 191
>gi|313677041|ref|YP_004055037.1| recombination protein recr [Marivirga tractuosa DSM 4126]
gi|312943739|gb|ADR22929.1| recombination protein RecR [Marivirga tractuosa DSM 4126]
Length = 202
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K IE+ + +++PG G ++A R LHL+K+ E +A+++ ++ + C C
Sbjct: 2 EFSSKLIESAVNEFSKLPGIGKKTALRLVLHLLKQDENFTTDIAQSLVDMRQNIKYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +RD S+I +VED D+ A+E + N LYHVLGG +SP++ IGPE
Sbjct: 62 HNISDEVVCNICKSHKRDNSIICLVEDTRDVLAIENTSQYNGLYHVLGGIISPIEGIGPE 121
Query: 124 DIGIQSLIERI--EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
D+ I SL+ER+ +++E+IF +S T+EG TTA YI K+K +K + +A GIP+G
Sbjct: 122 DLTIDSLMERVSNSDSEVKEIIFGLSPTMEGDTTAFYISKKVKQFGIKTSTIARGIPIGG 181
Query: 182 ELDYLDDGTIFEAIRSRTV 200
EL+Y D+ T+ +I SRT
Sbjct: 182 ELEYADEITLGRSIVSRTA 200
>gi|145219840|ref|YP_001130549.1| recombination protein RecR [Prosthecochloris vibrioformis DSM 265]
gi|189029367|sp|A4SEY8|RECR_PROVI RecName: Full=Recombination protein recR
gi|145206004|gb|ABP37047.1| recombination protein RecR [Chlorobium phaeovibrioides DSM 265]
Length = 204
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 127/203 (62%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI A++PG G ++ARR +H++++ LA A+ + + V CSIC
Sbjct: 2 RYTSAAIEALIDAFAKLPGVGRKTARRLAMHVLQQPRLEAERLASALLDAKDLVVRCSIC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC IC Q RD SVI VVE D+ A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDRDADPCRICTGQGRDQSVICVVESPVDVLAFEKTAHYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI I+ L++R+ E ++RE++ A++ T+EG+TT+ Y+ + + + +T++A GIP
Sbjct: 122 PDDINIRELLQRLQPEEGGEVREIVLALNPTVEGETTSLYLSRLIAPLGIMVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+++D+ T+ A+ RT
Sbjct: 182 VGAELEFIDEATLSRAMEGRTTF 204
>gi|41406414|ref|NP_959250.1| recombination protein RecR [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463085|ref|YP_879673.1| recombination protein RecR [Mycobacterium avium 104]
gi|254773392|ref|ZP_05214908.1| recombination protein RecR [Mycobacterium avium subsp. avium ATCC
25291]
gi|73621499|sp|Q744M5|RECR_MYCPA RecName: Full=Recombination protein recR
gi|171472969|sp|A0Q9T5|RECR_MYCA1 RecName: Full=Recombination protein recR
gi|41394763|gb|AAS02633.1| RecR [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164372|gb|ABK65269.1| recombination protein RecR [Mycobacterium avium 104]
Length = 203
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLARVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDASV+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSDDERCRICSDPRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|219871233|ref|YP_002475608.1| recombination protein RecR [Haemophilus parasuis SH0165]
gi|254790770|sp|B8F5Q8|RECR_HAEPS RecName: Full=Recombination protein recR
gi|219691437|gb|ACL32660.1| recombination protein RecR [Haemophilus parasuis SH0165]
Length = 201
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +ENL++ L +PG GP+SA+R HL+++ LA+A++ + C C
Sbjct: 3 SSPLLENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + + VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDECAICQNYRRQISGQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + +E+I A + TIEG TA+YI + ++K+TR+A+GIP+GSEL+
Sbjct: 123 IGLDLLQKRLEEESFQEVILATNPTIEGDATANYIAEMCSIHNIKVTRIAHGIPVGSELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D ++ + R +
Sbjct: 183 MVDGTSLSHSFVGRRDI 199
>gi|171058657|ref|YP_001791006.1| recombination protein RecR [Leptothrix cholodnii SP-6]
gi|170776102|gb|ACB34241.1| recombination protein RecR [Leptothrix cholodnii SP-6]
Length = 198
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 116/197 (58%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +G + +L++ L R+PG G +SA+R HL++ + LA A+ KV C
Sbjct: 2 KASSGDALAHLVEALRRLPGVGVKSAQRMAYHLLQHDQPAASQLARALDAAVQKVQHCER 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C CA C+D QRD + VVE AD A+ER+ + LY VL G LSPLD +G
Sbjct: 62 CHTFTEQPVCATCLDPQRDPHQLCVVETPADQAAVERTGSYRGLYFVLMGKLSPLDGVGA 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DIG+ +LIER + ++E+I A + T EG+ TAH I + LK +++TRLA G+P+GSE
Sbjct: 122 HDIGLPALIERAFDEVVQEVIVATNFTAEGEVTAHVIAEALKSRGLRVTRLARGVPIGSE 181
Query: 183 LDYLDDGTIFEAIRSRT 199
L+Y+D GTI A R
Sbjct: 182 LEYVDLGTIAHAFSERR 198
>gi|123443299|ref|YP_001007273.1| recombination protein RecR [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332160793|ref|YP_004297370.1| recombination protein RecR [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166223510|sp|A1JNB5|RECR_YERE8 RecName: Full=Recombination protein recR
gi|122090260|emb|CAL13126.1| recombination protein RecR [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318604679|emb|CBY26177.1| recombination protein RecR [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665023|gb|ADZ41667.1| recombination protein RecR [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863112|emb|CBX73242.1| recombination protein recR [Yersinia enterocolitica W22703]
Length = 201
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQEHCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEKRLETETISEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRNPI 199
>gi|258645513|ref|ZP_05732982.1| recombination protein RecR [Dialister invisus DSM 15470]
gi|260402867|gb|EEW96414.1| recombination protein RecR [Dialister invisus DSM 15470]
Length = 196
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 121/195 (62%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++E + + ++PG G ++ARR ++++ ++ + + + +K+C CSIC N+
Sbjct: 2 NSDLELVAEQFRKLPGIGVKTARRLAYFMLERPKEDIDAFINVIHSARDKICYCSICCNL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T+DPC IC D +RD+SVI VVE D+ ALE+S + LYHVL G LSPLD IGPE +
Sbjct: 62 ATSDPCEICGDNRRDSSVICVVEHPQDVQALEQSHEYHGLYHVLHGVLSPLDGIGPEQLK 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ R+ ++E+I A EG+ TA+Y+ +K + V++TR+A G+P G ++ Y
Sbjct: 122 IKELLNRLADDTVKEVIIATDPNTEGEATAYYLSRLIKPLSVRVTRIARGLPAGGDVGYA 181
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A+ +R +
Sbjct: 182 DSMTLAGAVENRKEM 196
>gi|222110706|ref|YP_002552970.1| recombination protein recr [Acidovorax ebreus TPSY]
gi|221730150|gb|ACM32970.1| recombination protein RecR [Acidovorax ebreus TPSY]
Length = 196
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 114/191 (59%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C
Sbjct: 6 SLDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGAQMLSQALAQAATQVRHCERCHTFTE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C C+D RDA+ + VVE AD A+ER+ A LY VL G LSPLD +GP DIG+
Sbjct: 66 GAVCETCLDPARDATRLCVVETPADQAAMERTAAFKGLYFVLMGRLSPLDGVGPRDIGVH 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L+ER ++E+I A S T EG+ TAH I + LK V +TRLA G+P+GSEL+Y+D
Sbjct: 126 NLLERASDGVVQEVILATSFTAEGEATAHAIGEALKRRGVHVTRLARGVPVGSELEYVDL 185
Query: 189 GTIFEAIRSRT 199
GTI A+ R
Sbjct: 186 GTIAHALADRR 196
>gi|298230137|ref|ZP_06963818.1| recombination protein RecR [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254424|ref|ZP_06978010.1| recombination protein RecR [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503416|ref|YP_003725356.1| recombination protein RecR [Streptococcus pneumoniae TCH8431/19A]
gi|298239011|gb|ADI70142.1| recombination protein RecR [Streptococcus pneumoniae TCH8431/19A]
Length = 198
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDEDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|312278019|gb|ADQ62676.1| Recombination protein recR [Streptococcus thermophilus ND03]
Length = 198
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI ++ PG G ++A R + + ++ + A+ + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSFSKFPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D
Sbjct: 62 RLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++
Sbjct: 122 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|255028849|ref|ZP_05300800.1| recombination protein RecR [Listeria monocytogenes LO28]
Length = 179
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 112/175 (64%)
Query: 26 RSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVI 85
+SA R +++ KE + A+A+ + + CS+CG++ DPC IC D RD SVI
Sbjct: 4 KSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVI 63
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I L++R++ I E+I A
Sbjct: 64 CVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILA 123
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
+ +EG+ TA YI LK +K+TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 124 TNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRRE 178
>gi|78189156|ref|YP_379494.1| recombination protein RecR [Chlorobium chlorochromatii CaD3]
gi|123579732|sp|Q3ARC4|RECR_CHLCH RecName: Full=Recombination protein recR
gi|78171355|gb|ABB28451.1| RecR protein [Chlorobium chlorochromatii CaD3]
Length = 204
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ ++ LI A++PG G ++A+R ++++ + + LA+A+ ++ KV C+IC
Sbjct: 2 RFPSVALDTLIDEFAKLPGIGRKTAQRLAMYILHEPKIEAEQLAKALLDVKEKVVRCTIC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
N+ TDPCAIC + RD +VI VVE D+ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNITDVGTDPCAICASKARDRTVICVVESPVDMLAFEKTGHYKGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ RI V + +RE++ A++ TIEG+TT+ Y+ LK + + +T++A GIP
Sbjct: 122 PDDIKVRELLARIPVGEASGVREVVLALNPTIEGETTSLYLARLLKPLGIAVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTV 200
+G+EL+Y+D+ T+ A+ RTV
Sbjct: 182 VGAELEYVDEATLSRAMEGRTV 203
>gi|238788051|ref|ZP_04631847.1| hypothetical protein yfred0001_15420 [Yersinia frederiksenii ATCC
33641]
gi|238723999|gb|EEQ15643.1| hypothetical protein yfred0001_15420 [Yersinia frederiksenii ATCC
33641]
Length = 201
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEQDRCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEKRLETETISEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRNPI 199
>gi|121594689|ref|YP_986585.1| recombination protein RecR [Acidovorax sp. JS42]
gi|171769453|sp|A1W8D4|RECR_ACISJ RecName: Full=Recombination protein recR
gi|120606769|gb|ABM42509.1| recombination protein RecR [Acidovorax sp. JS42]
Length = 196
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 114/191 (59%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C
Sbjct: 6 SLDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGAQVLSQALAQAATQVRHCERCHTFTE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C C+D RDA+ + VVE AD A+ER+ A LY VL G LSPLD +GP DIG+
Sbjct: 66 GAVCETCLDPARDATRLCVVETPADQAAMERTAAFKGLYFVLMGRLSPLDGVGPRDIGVH 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+L+ER ++E+I A S T EG+ TAH I + LK V +TRLA G+P+GSEL+Y+D
Sbjct: 126 NLLERASDGVVQEVILATSFTAEGEATAHAIGEALKRRGVHVTRLARGVPVGSELEYVDL 185
Query: 189 GTIFEAIRSRT 199
GTI A+ R
Sbjct: 186 GTIAHALADRR 196
>gi|152980835|ref|YP_001354018.1| recombination protein RecR [Janthinobacterium sp. Marseille]
gi|172049091|sp|A6T0H1|RECR_JANMA RecName: Full=Recombination protein recR
gi|151280912|gb|ABR89322.1| Recombinational DNA repair protein (RecF pathway)
[Janthinobacterium sp. Marseille]
Length = 198
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 114/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L + L R+PG GP+SA+R HL++ L A++ KV C++C
Sbjct: 3 TPSSLDFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVEKVQHCAMCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C+D +R+ +++ VVE D +E++ LY VL G LSPLD IGP+DI
Sbjct: 63 FTEHEVCETCLDAERNPALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ LI R ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 123 HLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GTI A+ R
Sbjct: 183 VDAGTIARAMLDRRT 197
>gi|254818509|ref|ZP_05223510.1| recombination protein RecR [Mycobacterium intracellulare ATCC
13950]
Length = 203
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD S + VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSDNERCRICADPRRDGSQVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|227545159|ref|ZP_03975208.1| recombination protein RecR [Lactobacillus reuteri CF48-3A]
gi|300909168|ref|ZP_07126629.1| recombination protein R [Lactobacillus reuteri SD2112]
gi|227184891|gb|EEI64962.1| recombination protein RecR [Lactobacillus reuteri CF48-3A]
gi|300893033|gb|EFK86392.1| recombination protein R [Lactobacillus reuteri SD2112]
Length = 200
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN
Sbjct: 4 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLSMQEDDVTNFAKSLLSAKRDLHNCSICGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE + D+ A+ER + LYHVL G +SP+ GPEDI
Sbjct: 64 ITEDDPCPICRDKTRDHSQILVVEQLQDVMAMERMHEYHGLYHVLHGVISPVAGTGPEDI 123
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R+ + +++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D
Sbjct: 124 NITSLLKRLKKDNEVKEIIIATNASSDGELTAGYLAKLIKPAGIKVTRLAHGLSVGADID 183
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 184 YADEMTLFKAVQGRTEM 200
>gi|306829918|ref|ZP_07463105.1| recombination protein R [Streptococcus mitis ATCC 6249]
gi|322375681|ref|ZP_08050193.1| recombination protein RecR [Streptococcus sp. C300]
gi|304427929|gb|EFM31022.1| recombination protein R [Streptococcus mitis ATCC 6249]
gi|321279389|gb|EFX56430.1| recombination protein RecR [Streptococcus sp. C300]
Length = 198
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDNEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|256374360|ref|YP_003098020.1| recombination protein RecR [Actinosynnema mirum DSM 43827]
gi|255918663|gb|ACU34174.1| recombination protein RecR [Actinosynnema mirum DSM 43827]
Length = 197
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 2/198 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + +G L +A+ + V C +CG
Sbjct: 1 MYEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAAEPADIGRLQDALQKVKEGVVFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSAETTCRICRDPRRDLTLICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ I+ L+ RI + E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L
Sbjct: 121 LRIRQLLTRIGT-DVSEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDL 179
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D+ T+ A+ R L
Sbjct: 180 EFADELTLGRALSGRRSL 197
>gi|209522076|ref|ZP_03270729.1| recombination protein RecR [Burkholderia sp. H160]
gi|209497485|gb|EDZ97687.1| recombination protein RecR [Burkholderia sp. H160]
Length = 198
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 109/195 (55%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLRHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D++RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDEERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLTVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|240173344|ref|ZP_04752002.1| recombination protein RecR [Mycobacterium kansasii ATCC 12478]
Length = 203
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + + L + + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGRLPGIGPKSAQRIAFHLLSVEPSDIDRLTAVLGRVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE
Sbjct: 61 NVSDGERCRICADPRRDGSLVCVVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPEQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R VL
Sbjct: 181 GGDLEFADELTLGRALTGRRVL 202
>gi|288959355|ref|YP_003449696.1| recombination protein [Azospirillum sp. B510]
gi|288911663|dbj|BAI73152.1| recombination protein [Azospirillum sp. B510]
Length = 197
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 146/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++L+++PG GPRSARRA LHL+K+++ LL PL+EAMA + CS+CG
Sbjct: 1 MIGPEIERLIQLLSKLPGLGPRSARRAALHLMKRRDSLLVPLSEAMAAAGESIRACSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+D+ DPC +C D RD SVI VVED DLWALER++A YHVLGG LS L +GP+D
Sbjct: 61 NLDSRDPCTVCADPARDRSVICVVEDAGDLWALERTRAFRGTYHVLGGLLSALQGVGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + L ER + +RE+I A++AT++GQTTAH + D+L DV ++RLA+G+P+G ELD
Sbjct: 121 LNLAGLAERAKDPAVREIILALNATVDGQTTAHVVTDRLTDSDVSVSRLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLDDGT+ A+++R L
Sbjct: 181 YLDDGTLTAALKARRPL 197
>gi|221198094|ref|ZP_03571140.1| recombination protein RecR [Burkholderia multivorans CGD2M]
gi|221204347|ref|ZP_03577364.1| recombination protein RecR [Burkholderia multivorans CGD2]
gi|221175204|gb|EEE07634.1| recombination protein RecR [Burkholderia multivorans CGD2]
gi|221182026|gb|EEE14427.1| recombination protein RecR [Burkholderia multivorans CGD2M]
Length = 198
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHCDKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|115351814|ref|YP_773653.1| recombination protein RecR [Burkholderia ambifaria AMMD]
gi|170703765|ref|ZP_02894478.1| recombination protein RecR [Burkholderia ambifaria IOP40-10]
gi|171322543|ref|ZP_02911332.1| recombination protein RecR [Burkholderia ambifaria MEX-5]
gi|172060785|ref|YP_001808437.1| recombination protein RecR [Burkholderia ambifaria MC40-6]
gi|122323080|sp|Q0BEV4|RECR_BURCM RecName: Full=Recombination protein recR
gi|229890130|sp|B1YRE7|RECR_BURA4 RecName: Full=Recombination protein recR
gi|115281802|gb|ABI87319.1| recombination protein RecR [Burkholderia ambifaria AMMD]
gi|170131326|gb|EDS99940.1| recombination protein RecR [Burkholderia ambifaria IOP40-10]
gi|171092124|gb|EDT37536.1| recombination protein RecR [Burkholderia ambifaria MEX-5]
gi|171993302|gb|ACB64221.1| recombination protein RecR [Burkholderia ambifaria MC40-6]
Length = 198
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 106/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|320536108|ref|ZP_08036161.1| recombination protein RecR [Treponema phagedenis F0421]
gi|320147025|gb|EFW38588.1| recombination protein RecR [Treponema phagedenis F0421]
Length = 197
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 114/194 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+++LI +R+PG G +SA R HL+K+ LA+++ ++ K+ CS+CG
Sbjct: 2 NALDDLIDNFSRLPGIGKKSAMRLAYHLLKRSPTEAQALAKSILMLHEKIHPCSVCGAFT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D RD S I VVE D+ + N L+HVLGG ++PL+ +GP+ + I
Sbjct: 62 DQDLCLICADPLRDTSTICVVEQPQDVETVAAVAEYNGLFHVLGGVIAPLEGVGPDQLRI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+RI+ I+E+I A + TIEG TTA Y+ L+ + ++RLA G+P+G +L+Y D
Sbjct: 122 GELIKRIQQGNIKEIILATNPTIEGDTTALYLQKILQDFSLTVSRLASGLPVGGDLEYTD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ + R R L
Sbjct: 182 RLTLARSFRGRINL 195
>gi|303235790|ref|ZP_07322397.1| recombination protein RecR [Prevotella disiens FB035-09AN]
gi|302484237|gb|EFL47225.1| recombination protein RecR [Prevotella disiens FB035-09AN]
Length = 202
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 133/199 (66%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + +E + A++PG G ++A R LHL+++ ++ + E ++ + + + C +
Sbjct: 2 QQFPSQLLEKAVGEFAKLPGVGRKTALRFVLHLLRESKEEVDVFTETISTMRHDIKYCHV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ TD CAIC + +RD+S I VVE+V D+ A+E ++ N LYHVLGG +SP+D IGP
Sbjct: 62 CHNISDTDTCAICANSRRDSSTICVVENVQDVLAIENTQQFNGLYHVLGGIISPIDGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
++ I+SL+ER++ I+E+I A+++T+EG TT YI KLK D+ I+ +A GI +G E
Sbjct: 122 NNLEIESLVERVKSGGIKEVILALASTMEGDTTNFYISRKLKEYDITISIIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT++
Sbjct: 182 LEYTDEVTLGRSIANRTIM 200
>gi|170726148|ref|YP_001760174.1| recombination protein RecR [Shewanella woodyi ATCC 51908]
gi|238688704|sp|B1KNK2|RECR_SHEWM RecName: Full=Recombination protein recR
gi|169811495|gb|ACA86079.1| recombination protein RecR [Shewanella woodyi ATCC 51908]
Length = 199
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 3 FSPLVDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGQSLASALSSAMSDVGHCQACRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R ++ VI VVE AD+ A+E + Y VL G LSPLD +GPE+
Sbjct: 63 FTEETLCPICASHKRGNSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + ++ ELI A + T+EG TAH+I D KG V ++R+A+G+P+G EL+
Sbjct: 123 LGLSLLEAHLASGEVSELILATNPTVEGDATAHFIADMAKGHQVSVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|160893578|ref|ZP_02074362.1| hypothetical protein CLOL250_01132 [Clostridium sp. L2-50]
gi|156864563|gb|EDO57994.1| hypothetical protein CLOL250_01132 [Clostridium sp. L2-50]
Length = 198
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I G E+ LI+ L R+PG G ++A+R H++ E+ LA+++ N K+ C+ C
Sbjct: 2 DIYGGEVNRLIEELGRLPGIGAKTAQRLAFHIISMPEERAQALADSIVNAKKKIRYCNNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ +D C IC R+ VI+VVE DL A ER+ + +YHVL G ++P IGP
Sbjct: 62 YTITDSDLCPICRSANRNHKVIMVVETPRDLAAYERTNQYDGVYHVLHGVINPSLGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI I L++R+ + ELI A + EG+ TA YI +K +K++R+A G+P+G +L
Sbjct: 122 DIKIAELMKRL-QGDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R L
Sbjct: 181 ECIDEVTLLRALEGRVYL 198
>gi|330817180|ref|YP_004360885.1| Recombination protein RecR [Burkholderia gladioli BSR3]
gi|327369573|gb|AEA60929.1| Recombination protein RecR [Burkholderia gladioli BSR3]
Length = 198
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C +C D +RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TESRICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|227494435|ref|ZP_03924751.1| recombination protein [Actinomyces coleocanis DSM 15436]
gi|226832169|gb|EEH64552.1| recombination protein [Actinomyces coleocanis DSM 15436]
Length = 196
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 2/197 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L +PG GP+SA+R H++ + LA A+ + KV C CG
Sbjct: 1 MYEGAVQDLIDELGALPGVGPKSAQRIAFHILSADSADVMRLANALRVVKEKVRFCENCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC D +RD ++I VVE+ D+ +ER+ + LYHVLGG++ P+ +GPE
Sbjct: 61 NIAEAPTCRICQDPRRDTTLICVVEEAKDVEVIERTGSYRGLYHVLGGAIDPIKGLGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R+ +RE+I A IEG+ TA Y+ L+ + V +RLA G+P+G +L+
Sbjct: 121 LRIRQLLGRLT--NVREVIIATDPNIEGEATATYLARMLETMQVPASRLALGLPVGGDLE 178
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ A R +L
Sbjct: 179 YADEITLGRAFEGRRLL 195
>gi|238759222|ref|ZP_04620389.1| hypothetical protein yaldo0001_7680 [Yersinia aldovae ATCC 35236]
gi|238702509|gb|EEP95059.1| hypothetical protein yaldo0001_7680 [Yersinia aldovae ATCC 35236]
Length = 201
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTQAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + I VVE AD+ A+E++ + Y VL G LSP+D IGP D
Sbjct: 63 FTEQDRCTICSNPRRQQNGQICVVESPADIHAVEQTGQFSGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG TA+YI +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEERLSTETITEVILATNPTVEGDATANYIGQMCGQYGALASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|332299030|ref|YP_004440952.1| Recombination protein recR [Treponema brennaborense DSM 12168]
gi|332182133|gb|AEE17821.1| Recombination protein recR [Treponema brennaborense DSM 12168]
Length = 195
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 115/194 (59%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E L + +R+PG G +SA R + +L+K + A+ +A + +K+ CS+CG+
Sbjct: 2 NALEELTESFSRLPGIGKKSASRISNYLLKADRGFMLRFAQQIAVLQDKIKPCSVCGSYT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPCAIC D R+ +++ VVE D+ +E S+ L+HVLGG ++PLD +GPE + I
Sbjct: 62 EEDPCAICSDPLRERNLLCVVEQPQDVQTIEASREFRGLFHVLGGVIAPLDGVGPEQLSI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ER+ + E+I A + T+EG TTA Y+ L V +TRLA G+P+G +L+Y D
Sbjct: 122 GKLMERLGDGSVTEVIIATNPTVEGDTTALYLQKLLAKTGVTVTRLASGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ + R R
Sbjct: 182 RLTLARSFRGRAAF 195
>gi|297538150|ref|YP_003673919.1| recombination protein RecR [Methylotenera sp. 301]
gi|297257497|gb|ADI29342.1| recombination protein RecR [Methylotenera sp. 301]
Length = 198
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 110/194 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E LI L +PG GP+SA+R +L+++ L+ A+ V C +C
Sbjct: 3 NPPALEQLIDSLRCLPGVGPKSAQRMAYYLLQRDRNGASALSAALETALEVVDHCKLCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C RD +++ VVE DL LE + A +Y VL G LSPLD IGP++I
Sbjct: 63 FSEQPICPLCAADNRDKNLLCVVEMPTDLLMLENTHAFMGMYFVLMGRLSPLDGIGPKEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LI+R + + E+I A + T+EG+ TAHYI + LK +K +R+A G+PMG E++Y
Sbjct: 123 HLDKLIKRAQDGLVNEVILATNYTVEGEATAHYISELLKTRGIKTSRIARGMPMGGEIEY 182
Query: 186 LDDGTIFEAIRSRT 199
+D GT+ +A+ R
Sbjct: 183 VDSGTLAQAMMERR 196
>gi|254448821|ref|ZP_05062277.1| recombination protein RecR [gamma proteobacterium HTCC5015]
gi|198261511|gb|EDY85800.1| recombination protein RecR [gamma proteobacterium HTCC5015]
Length = 199
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 112/195 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ LI+ +PG GP+SA+R H ++++ LA + ++ C C N
Sbjct: 4 SSLLNELIEAFRCLPGVGPKSAQRMAFHALERERGRAKHLALVLQQAVERIGHCQRCRNF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C++C +RD SV+ +VE AD+ ALE + N LY VL G LSPLD IGP+DIG
Sbjct: 64 TENAVCSLCESPRRDGSVLCIVESPADVSALEDATDYNGLYFVLMGRLSPLDGIGPKDIG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L +R+ +RELI A + T+EG+ TAHYI + V ++R+A+G+P+G EL+Y+
Sbjct: 124 LDQLEQRLSDGSVRELILATNPTVEGEATAHYISELAAEAKVAVSRIAHGVPLGGELEYI 183
Query: 187 DDGTIFEAIRSRTVL 201
D GT+ A R L
Sbjct: 184 DGGTLSHAFSQRLRL 198
>gi|167587034|ref|ZP_02379422.1| recombination protein RecR [Burkholderia ubonensis Bu]
Length = 198
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 106/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDTERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|146282185|ref|YP_001172338.1| recombination protein RecR [Pseudomonas stutzeri A1501]
gi|166221957|sp|A4VKJ5|RECR_PSEU5 RecName: Full=Recombination protein recR
gi|145570390|gb|ABP79496.1| recombination protein RecR [Pseudomonas stutzeri A1501]
Length = 199
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTRAMEGVGYCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEDELCPQCADPRRDDSLLCVVQSPVDVFAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ R+ E+I A + T+EG+ TAHYI L + I+R+A+G+P+G ELD
Sbjct: 122 GIPELLGRVADGAFSEVILATNPTVEGEATAHYIAQMLIPKGLTISRIAHGVPLGGELDL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRKPI 197
>gi|116617406|ref|YP_817777.1| DNA replication and repair protein RecR [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096253|gb|ABJ61404.1| DNA replication and repair protein RecR [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 213
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R + + E+ + ++A+ + + CSICGN
Sbjct: 15 YPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSICGN 74
Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TDPC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPE
Sbjct: 75 ITATDTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 134
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS+
Sbjct: 135 DINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSD 194
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D+ T+ +A++ RT L
Sbjct: 195 IDYADELTLIKAVQGRTKL 213
>gi|238783569|ref|ZP_04627590.1| hypothetical protein yberc0001_13510 [Yersinia bercovieri ATCC
43970]
gi|238715447|gb|EEQ07438.1| hypothetical protein yberc0001_13510 [Yersinia bercovieri ATCC
43970]
Length = 201
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQERCTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEKRLESETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRHPI 199
>gi|308233499|ref|ZP_07664236.1| DNA replication and repair protein RecR [Atopobium vaginae DSM
15829]
gi|328943417|ref|ZP_08240882.1| recombination protein R [Atopobium vaginae DSM 15829]
gi|327491386|gb|EGF23160.1| recombination protein R [Atopobium vaginae DSM 15829]
Length = 200
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 126/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + ++ ++ R+PG GP+SA+R L++ ++ L+ A+ N+ V C +C
Sbjct: 3 QTSNQALQFVLDEFGRLPGIGPKSAQRIAYFLMEADDETARRLSRAILNLKEHVHFCPVC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
T D CA+C D RD S + VV + D+ ++E++ + LYHVLGG +SP+D+IGPE
Sbjct: 63 FAYATDDVCALCNDSTRDVSKVCVVCEPRDIASIEKTGVYHGLYHVLGGVISPMDKIGPE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L+ R+ +I+E+I A++ T+EG+TTA Y+ +K + ++ TRLA G+P+G +L
Sbjct: 123 QLHVKELLARLAGDEIKEVILAMNPTVEGETTATYLARTIKTLGIQTTRLASGLPVGGDL 182
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y+D+ T+ AI +R +
Sbjct: 183 EYVDEVTLGRAIEARHEM 200
>gi|46203406|ref|ZP_00051579.2| COG0353: Recombinational DNA repair protein (RecF pathway)
[Magnetospirillum magnetotacticum MS-1]
Length = 201
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 150/201 (74%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM ++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRIAAERIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 RSCGNVDTSDPCTICRDESRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L+ER ++E+I A++AT++GQTTAHYI + +K + + ITRLA+G+P+G
Sbjct: 121 RPEHLTIARLVERAGEPGVKEIILALNATVDGQTTAHYITESIKHLGLTITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLTAAIRSRTAF 201
>gi|94311065|ref|YP_584275.1| recombination protein RecR [Cupriavidus metallidurans CH34]
gi|172046202|sp|Q1LLH0|RECR_RALME RecName: Full=Recombination protein recR
gi|93354917|gb|ABF09006.1| gap repair protein [Cupriavidus metallidurans CH34]
Length = 204
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R HL++ + L +A+ + + C+ C
Sbjct: 5 PPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCTRCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C D +RDA+++ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 65 FTELEICGTCSDPERDATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
+ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 125 HLDRLLARATDPELGGPASEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVPVGG 184
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 185 ELEYVDAGTIARAVMDRRTL 204
>gi|183985200|ref|YP_001853491.1| recombination protein RecR [Mycobacterium marinum M]
gi|183178526|gb|ACC43636.1| recombination protein RecR [Mycobacterium marinum M]
Length = 203
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE
Sbjct: 61 NVSDDERCRICADPRRDGSLVCVVEEPKDIQAVERTREYRGRYHVLGGALDPLSGIGPEQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALTGRRAM 202
>gi|294787158|ref|ZP_06752411.1| recombination protein RecR [Parascardovia denticolens F0305]
gi|315227305|ref|ZP_07869092.1| recombination protein R [Parascardovia denticolens DSM 10105]
gi|294484514|gb|EFG32149.1| recombination protein RecR [Parascardovia denticolens F0305]
gi|315119755|gb|EFT82888.1| recombination protein R [Parascardovia denticolens DSM 10105]
Length = 203
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 127/195 (65%), Gaps = 3/195 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I+N+I A +PG GP+ A+R HL+ ++ LAE++ + KV C ICGNV
Sbjct: 8 AIQNVIDRFASLPGIGPKGAQRIAFHLLSVSQEDAQALAESILTMKEKVRFCEICGNVCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ PC IC+D +RD ++I VV++ D+ +LER+ LYHVLGG++ P+ +GP+D+ I
Sbjct: 68 SSPCPICLDPRRDRTIICVVQEPKDIMSLERTHEYRGLYHVLGGAIDPMADVGPQDLHIT 127
Query: 129 SLIERIEV---KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R++ K+I+E+IFA++ IEG+ T Y+ L+ +D+K+TRLA G+PMGS+L+Y
Sbjct: 128 DLLNRLKTDEGKEIKEIIFALNPDIEGEATTTYLSRLLEPLDIKLTRLASGLPMGSDLEY 187
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 188 ADEITLGRALSGRQA 202
>gi|150398621|ref|YP_001329088.1| recombination protein RecR [Sinorhizobium medicae WSM419]
gi|166221968|sp|A6UF23|RECR_SINMW RecName: Full=Recombination protein recR
gi|150030136|gb|ABR62253.1| recombination protein RecR [Sinorhizobium medicae WSM419]
Length = 201
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 129/189 (68%), Positives = 163/189 (86%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D++RD +VIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SCCGNVDTIDPCTVCGDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I++L++R+ +RELI A++AT+EGQTTAHYI D+L+G++V+ITRLA+G+P+G
Sbjct: 121 GPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG 180
Query: 181 SELDYLDDG 189
ELDYLD+G
Sbjct: 181 GELDYLDEG 189
>gi|300773416|ref|ZP_07083285.1| recombination protein R [Sphingobacterium spiritivorum ATCC 33861]
gi|300759587|gb|EFK56414.1| recombination protein R [Sphingobacterium spiritivorum ATCC 33861]
Length = 204
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 119/197 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K ++ + R+PG G ++A R LHL+K+ + + A+ + ++ C C
Sbjct: 2 EFSSKLLQQAVDEFGRLPGIGQKTALRLVLHLLKQSDGEVLRFTGALNQLKEQIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC +RD S+I VVED D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 FNISDHDICEICSSLKRDKSLICVVEDTRDVMAIENTNQYQGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L++R+ ++E+I A+SAT+EG TT Y+ KLK D++I+ +A GI G EL
Sbjct: 122 DLKIEGLVQRLRSGHVKEVILALSATMEGDTTIFYLYRKLKEFDIQISTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEITLGRSIATRVP 198
>gi|240948279|ref|ZP_04752665.1| recombination protein RecR [Actinobacillus minor NM305]
gi|257465542|ref|ZP_05629913.1| recombination protein RecR [Actinobacillus minor 202]
gi|240297318|gb|EER47859.1| recombination protein RecR [Actinobacillus minor NM305]
gi|257451202|gb|EEV25245.1| recombination protein RecR [Actinobacillus minor 202]
Length = 201
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +ENL++ L +PG GP+SA+R HL+++ L++A+ + C C
Sbjct: 3 SSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALNEAMTHIGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + + VVE D+ A+E++ + Y VL G LSP+D +GP +
Sbjct: 63 FTEEEECNICRNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPIDGVGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P+G L+
Sbjct: 123 IGLDLLQQRLENESFHEVILATNPTIEGDATANYIAEICRIYNVKATRIAHGVPVGGSLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ + R +
Sbjct: 183 TVDGTTLSHSFAGRRDI 199
>gi|253999386|ref|YP_003051449.1| recombination protein RecR [Methylovorus sp. SIP3-4]
gi|313201408|ref|YP_004040066.1| recombination protein RecR [Methylovorus sp. MP688]
gi|253986065|gb|ACT50922.1| recombination protein RecR [Methylovorus sp. SIP3-4]
gi|312440724|gb|ADQ84830.1| recombination protein RecR [Methylovorus sp. MP688]
Length = 199
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 115/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E L++ L +PG GP+SA R HL+++ LA+A+ N V CS+C
Sbjct: 3 NPPALEQLVESLRCLPGVGPKSALRMAYHLLQRDRSGANGLAQALHNALQVVTHCSLCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C RD +++ VVE DL LE+++ Y VL G LSPLD IGP++I
Sbjct: 63 FSEDIVCPLCAADNRDPTLLCVVEMPTDLMMLEQTRVFQGRYFVLMGKLSPLDGIGPKEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L++R + + E++ A + T+EG+ TAHYI + L+ +K++R+A G+PMG E+++
Sbjct: 123 HLEKLLKRAQDGVVEEVVLATNYTVEGEATAHYISELLRSRGLKVSRIARGLPMGGEIEH 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GT+ +A+ R
Sbjct: 183 VDSGTLAQALMERRS 197
>gi|307127882|ref|YP_003879913.1| recombination protein RecR [Streptococcus pneumoniae 670-6B]
gi|307705391|ref|ZP_07642250.1| recombination protein RecR [Streptococcus mitis SK597]
gi|307707046|ref|ZP_07643843.1| recombination protein RecR [Streptococcus mitis SK321]
gi|322377429|ref|ZP_08051920.1| recombination protein RecR [Streptococcus sp. M334]
gi|306484944|gb|ADM91813.1| recombination protein RecR [Streptococcus pneumoniae 670-6B]
gi|307617572|gb|EFN96742.1| recombination protein RecR [Streptococcus mitis SK321]
gi|307621054|gb|EFO00132.1| recombination protein RecR [Streptococcus mitis SK597]
gi|321281629|gb|EFX58638.1| recombination protein RecR [Streptococcus sp. M334]
Length = 198
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPSRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|326336172|ref|ZP_08202344.1| recombination protein R [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691681|gb|EGD33648.1| recombination protein R [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 202
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 80/198 (40%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++++PG G R+A R LHL+K+ + LA ++ N++ C C
Sbjct: 2 NFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPNGQVEQLANSLVRFRNEITYCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC RD SVI VVEDV D+ A+E + N LYHVLGG +SP+D IGP
Sbjct: 62 HNISDTEICEICASFNRDPSVICVVEDVRDVMAIENTGQYNGLYHVLGGRISPIDGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+++ + ++E+IFA+S T+EG TT YI +L+G+D+ I+ +A GI +G EL
Sbjct: 122 ELHIASLVKKAKEGTVKEIIFALSNTMEGDTTNFYIFKQLEGLDITISTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYTDEVTLGRSILHRIPF 199
>gi|319763143|ref|YP_004127080.1| recombination protein recr [Alicycliphilus denitrificans BC]
gi|330825206|ref|YP_004388509.1| recombination protein RecR [Alicycliphilus denitrificans K601]
gi|317117704|gb|ADV00193.1| recombination protein RecR [Alicycliphilus denitrificans BC]
gi|329310578|gb|AEB84993.1| recombination protein RecR [Alicycliphilus denitrificans K601]
Length = 196
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 113/191 (59%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C
Sbjct: 6 SLDALIQALRRLPGVGVKSAQRMAFHLLQHDRGGAQQLSQALARACEQVRHCERCHTFTE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C C+D RDA+ + VVE AD ALER+ A LY VL G LSPLD +GP DIG+
Sbjct: 66 GAVCDTCLDPARDATRLCVVETPADQSALERTAAFKGLYFVLMGRLSPLDGVGPRDIGVH 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ER ++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 126 KLLERAGDGVVQEVILATSFTAEGEATAHAIAEALKRRGIHVTRLARGVPVGSELEYVDL 185
Query: 189 GTIFEAIRSRT 199
GTI A+ R
Sbjct: 186 GTIAHALADRR 196
>gi|161524621|ref|YP_001579633.1| recombination protein RecR [Burkholderia multivorans ATCC 17616]
gi|189350623|ref|YP_001946251.1| recombination protein RecR [Burkholderia multivorans ATCC 17616]
gi|221212756|ref|ZP_03585732.1| recombination protein RecR [Burkholderia multivorans CGD1]
gi|229890133|sp|A9AGY1|RECR_BURM1 RecName: Full=Recombination protein recR
gi|160342050|gb|ABX15136.1| recombination protein RecR [Burkholderia multivorans ATCC 17616]
gi|189334645|dbj|BAG43715.1| recombination protein [Burkholderia multivorans ATCC 17616]
gi|221166969|gb|EED99439.1| recombination protein RecR [Burkholderia multivorans CGD1]
Length = 198
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHCDKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|226303880|ref|YP_002763838.1| recombination protein RecR [Rhodococcus erythropolis PR4]
gi|229492582|ref|ZP_04386385.1| recombination protein RecR [Rhodococcus erythropolis SK121]
gi|226182995|dbj|BAH31099.1| recombination protein RecR [Rhodococcus erythropolis PR4]
gi|229320568|gb|EEN86386.1| recombination protein RecR [Rhodococcus erythropolis SK121]
Length = 206
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L A+ I + V C++CG
Sbjct: 1 MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRIRDGVQFCTVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+L+PL IGP+
Sbjct: 61 TVSDQEKCRICADARRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALNPLSGIGPDQ 120
Query: 125 IGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI ++ + E+I A EG+ TA Y++ ++ + ++RLA G+PM
Sbjct: 121 LRIRELLARIANQEDGVDVSEVIIATDPNTEGEATATYLVRMMRDIPGLTVSRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADELTLGRALSGRREL 202
>gi|295676460|ref|YP_003604984.1| recombination protein RecR [Burkholderia sp. CCGE1002]
gi|295436303|gb|ADG15473.1| recombination protein RecR [Burkholderia sp. CCGE1002]
Length = 198
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 109/195 (55%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLRHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D++RD S++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDEERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|241765308|ref|ZP_04763286.1| recombination protein RecR [Acidovorax delafieldii 2AN]
gi|241364989|gb|EER59900.1| recombination protein RecR [Acidovorax delafieldii 2AN]
Length = 196
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 117/194 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++ LI+ L R+PG G +SA+R HL++ LA A+ + V C++C
Sbjct: 3 STNSLDVLIQALRRLPGVGIKSAQRMAFHLLQHDRAGAQALARALDDAVGSVRHCALCHT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD IGP++I
Sbjct: 63 FTQAEVCSTCLDPARDASRLCVVETPADQSALERTGAYKGLYFVLMGRLSPLDGIGPKEI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+Q L+ER ++E+I A + EG+ TAH I + LK + +TRLA G+P+GSEL+Y
Sbjct: 123 GLQKLMERSTNGVVQEVILATNFNAEGEATAHVIGEALKSRGLHVTRLARGVPVGSELEY 182
Query: 186 LDDGTIFEAIRSRT 199
+D GTI A+ R
Sbjct: 183 VDLGTIAHALVDRR 196
>gi|118473908|ref|YP_890498.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 155]
gi|171472986|sp|A0R5R0|RECR_MYCS2 RecName: Full=Recombination protein recR
gi|118175195|gb|ABK76091.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 155]
Length = 203
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L + I + V CS+CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLGRIRDGVTFCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDAS++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE
Sbjct: 61 NVSDEERCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLNRIGERVEGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|169834528|ref|YP_001695053.1| recombination protein RecR [Streptococcus pneumoniae Hungary19A-6]
gi|307709607|ref|ZP_07646060.1| recombination protein RecR [Streptococcus mitis SK564]
gi|238688352|sp|B1I734|RECR_STRPI RecName: Full=Recombination protein recR
gi|168997030|gb|ACA37642.1| recombination protein RecR [Streptococcus pneumoniae Hungary19A-6]
gi|307619643|gb|EFN98766.1| recombination protein RecR [Streptococcus mitis SK564]
Length = 198
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CS+CG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSVCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|153006598|ref|YP_001380923.1| recombination protein RecR [Anaeromyxobacter sp. Fw109-5]
gi|171769313|sp|A7HGU3|RECR_ANADF RecName: Full=Recombination protein recR
gi|152030171|gb|ABS27939.1| recombination protein RecR [Anaeromyxobacter sp. Fw109-5]
Length = 198
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 120/193 (62%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I L+K LA++PG G ++A+R H++K G LA A+A + V LCS C +
Sbjct: 6 PIARLVKELAKLPGIGEKTAQRLAFHILKAGPGYAGELAGAIAGVVRDVRLCSECQTLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPCA+C D +RD+ +I VVE V DL A+ER+ YHVL G+LSPLD IGP ++ I+
Sbjct: 66 KDPCAVCADPRRDSRIICVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGIGPSELKIR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+E + E++ A + +EG+ TA Y+ LK + VK+TR+A GIPMG +L+Y D
Sbjct: 126 ELLLRLEREPAEEIVVATNPDVEGEATALYLTKLLKPLGVKVTRIAQGIPMGGDLEYADQ 185
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 186 VTLARALAGRREL 198
>gi|168483458|ref|ZP_02708410.1| recombination protein RecR [Streptococcus pneumoniae CDC1873-00]
gi|172043140|gb|EDT51186.1| recombination protein RecR [Streptococcus pneumoniae CDC1873-00]
Length = 198
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYRGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|168493573|ref|ZP_02717716.1| recombination protein RecR [Streptococcus pneumoniae CDC3059-06]
gi|270292367|ref|ZP_06198578.1| recombination protein RecR [Streptococcus sp. M143]
gi|293365896|ref|ZP_06612599.1| recombination protein R [Streptococcus oralis ATCC 35037]
gi|303255993|ref|ZP_07342021.1| recombination protein RecR [Streptococcus pneumoniae BS455]
gi|306824761|ref|ZP_07458105.1| recombination protein R [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|307702299|ref|ZP_07639257.1| recombination protein RecR [Streptococcus oralis ATCC 35037]
gi|307707462|ref|ZP_07643944.1| recombination protein RecR [Streptococcus mitis NCTC 12261]
gi|315613599|ref|ZP_07888506.1| recombination protein R [Streptococcus sanguinis ATCC 49296]
gi|183576463|gb|EDT96991.1| recombination protein RecR [Streptococcus pneumoniae CDC3059-06]
gi|270278346|gb|EFA24192.1| recombination protein RecR [Streptococcus sp. M143]
gi|291315574|gb|EFE56024.1| recombination protein R [Streptococcus oralis ATCC 35037]
gi|302597052|gb|EFL64170.1| recombination protein RecR [Streptococcus pneumoniae BS455]
gi|304432972|gb|EFM35944.1| recombination protein R [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|307616414|gb|EFN95605.1| recombination protein RecR [Streptococcus mitis NCTC 12261]
gi|307624102|gb|EFO03081.1| recombination protein RecR [Streptococcus oralis ATCC 35037]
gi|315314290|gb|EFU62335.1| recombination protein R [Streptococcus sanguinis ATCC 49296]
gi|327389858|gb|EGE88203.1| recombination protein RecR [Streptococcus pneumoniae GA04375]
gi|332072840|gb|EGI83321.1| recombination protein RecR [Streptococcus pneumoniae GA17545]
Length = 198
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|92116085|ref|YP_575814.1| recombination protein RecR [Nitrobacter hamburgensis X14]
gi|122418734|sp|Q1QQZ3|RECR_NITHX RecName: Full=Recombination protein recR
gi|91798979|gb|ABE61354.1| recombination protein RecR [Nitrobacter hamburgensis X14]
Length = 200
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 151/201 (75%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EI+ LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C
Sbjct: 1 MAS-VAGPEIDRLIQLLARLPGLGPRSARRAALHLIKKREALMTPLASALQVAIDRIQIC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+DT PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD +
Sbjct: 60 EICGNIDTRSPCTVCTDMRRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G
Sbjct: 120 GPQDLTIDALVSRAHDPRVTEIVLALNATVDGQTTAHYITDLLGEANVKVTRLAHGVPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+R RT
Sbjct: 180 GELDYLDEGTLSAAMRQRTPF 200
>gi|261880555|ref|ZP_06006982.1| recombination protein R [Prevotella bergensis DSM 17361]
gi|270332779|gb|EFA43565.1| recombination protein R [Prevotella bergensis DSM 17361]
Length = 201
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 130/199 (65%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ +E + ++PG G +++ R L+L+++ + ++A++ + N + C I
Sbjct: 2 EQYPSALLEKAVSEFCKLPGIGRKTSLRLVLYLLRQPVNRVNAFSDAISYVRNNIKYCKI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ T+ C+IC D +RD++ + VVE++ D+ A+E ++ + LYHVLGG +SP+D I P
Sbjct: 62 CHNISDTEVCSICSDTRRDSTTVCVVENIQDVMAVESTQQYHGLYHVLGGVISPMDGISP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ I SL+ER+ +I+E+IFA+S+T+EG TT Y+ LK DVK++ +A GI +G+E
Sbjct: 122 GDLQIDSLVERVARGEIKEIIFALSSTMEGDTTNFYLSRLLKKYDVKLSLIARGISVGNE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT L
Sbjct: 182 LEYADEVTLGRSILNRTPL 200
>gi|315121977|ref|YP_004062466.1| recombination protein RecR [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495379|gb|ADR51978.1| recombination protein RecR [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 201
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 174/201 (86%), Positives = 192/201 (95%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+KKITG EIENLIK+LARIPGFGPRSARRATLHLVKKKEQLLGPLA+ MA+IY KVCLC
Sbjct: 1 MKKKITGIEIENLIKMLARIPGFGPRSARRATLHLVKKKEQLLGPLADTMADIYKKVCLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SICGN+DT DPC ICID+QRD+SVI+V+EDVADLWALER+ AVNALYHVLGG+LSPLD I
Sbjct: 61 SICGNIDTIDPCIICIDEQRDSSVIVVIEDVADLWALERAGAVNALYHVLGGTLSPLDSI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDIGIQSLIERI+VKKIRELI AISATIEGQTTAHYIMDKLK +++KITRLAYGIP+G
Sbjct: 121 GPEDIGIQSLIERIKVKKIRELILAISATIEGQTTAHYIMDKLKNMNIKITRLAYGIPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SELDYLD+GT+FEAIRSRTVL
Sbjct: 181 SELDYLDEGTLFEAIRSRTVL 201
>gi|300814122|ref|ZP_07094405.1| recombination protein RecR [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511779|gb|EFK38996.1| recombination protein RecR [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 201
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
IE LI+ L R+PG GP++A+R H++ + + LA ++ I +KV CS+C N+
Sbjct: 7 PIEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELANSIGTIKSKVKKCSLCCNISD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TDPC IC D RD S I VV+ D+ A+ER+ LYHVL G +SPL DI
Sbjct: 67 TDPCNICQDNNRDKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFV 126
Query: 129 SLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R+E K I+E+I A S T++G TA ++++ LK D+K+TR+ YG+P+G +L+Y D
Sbjct: 127 ELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYD 186
Query: 188 DGTIFEAIRSRTVL 201
+ TI A+++R L
Sbjct: 187 EITISAALKNRREL 200
>gi|108801866|ref|YP_642063.1| recombination protein RecR [Mycobacterium sp. MCS]
gi|119871019|ref|YP_940971.1| recombination protein RecR [Mycobacterium sp. KMS]
gi|126437834|ref|YP_001073525.1| recombination protein RecR [Mycobacterium sp. JLS]
gi|123177963|sp|Q1B277|RECR_MYCSS RecName: Full=Recombination protein recR
gi|171769261|sp|A1UMX3|RECR_MYCSK RecName: Full=Recombination protein recR
gi|171855239|sp|A3Q7A7|RECR_MYCSJ RecName: Full=Recombination protein recR
gi|108772285|gb|ABG11007.1| DNA replication and repair protein RecR [Mycobacterium sp. MCS]
gi|119697108|gb|ABL94181.1| DNA replication and repair protein RecR [Mycobacterium sp. KMS]
gi|126237634|gb|ABO01035.1| DNA replication and repair protein RecR [Mycobacterium sp. JLS]
Length = 203
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L + I + V C +CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRIRDGVKFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV D C IC D +RDAS++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSDADRCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|87122722|ref|ZP_01078597.1| recombination protein RecR [Marinomonas sp. MED121]
gi|86162019|gb|EAQ63309.1| recombination protein RecR [Marinomonas sp. MED121]
Length = 198
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 121/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI+ L +PG GP+SA++ L+L+++ Q LAE++ +KV CS C
Sbjct: 2 VFSPLIAELIESLRCLPGVGPKSAQKMALYLLERDHQGADRLAESLRTALDKVGRCSSCR 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC RD+ I +VE AD+ A+E S N Y VL G LSP+D IGP++
Sbjct: 62 NLTEDLECQICSATDRDSKTICIVETPADVAAMEASGRFNGRYFVLLGHLSPIDGIGPDE 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +E K+ E+I A ++T+EG+ T+HYI + LK D++ITR+A+G+PMG EL+
Sbjct: 122 LGLDRLENIVETNKVEEVIIATNSTLEGEATSHYIAEMLKSSDIEITRIAHGVPMGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A+ R L
Sbjct: 182 YVDGNTLALALDGRKKL 198
>gi|254252244|ref|ZP_04945562.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia
dolosa AUO158]
gi|124894853|gb|EAY68733.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia
dolosa AUO158]
Length = 198
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 106/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAPICELCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|167855376|ref|ZP_02478143.1| recombination protein RecR [Haemophilus parasuis 29755]
gi|167853524|gb|EDS24771.1| recombination protein RecR [Haemophilus parasuis 29755]
Length = 201
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +ENL++ L +PG GP+SA+R HL+++ LA+A++ + C C
Sbjct: 3 SSPLLENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + + VVE AD+ A+E++ + Y VL G LSPLD IGP +
Sbjct: 63 FTEEDECAICQNYRRQISGQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+E + +E+I A ++TIEG TA+YI + ++K+TR+A+GIP+GSEL+
Sbjct: 123 IGLDLLQKRLEEESFQEVILATNSTIEGDATANYIAEMCSIHNIKVTRIAHGIPVGSELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D ++ + R +
Sbjct: 183 MVDGTSLSHSFVGRRDI 199
>gi|33865462|ref|NP_897021.1| recombination protein RecR [Synechococcus sp. WH 8102]
gi|73621524|sp|Q7U7Q3|RECR_SYNPX RecName: Full=Recombination protein recR
gi|33632631|emb|CAE07443.1| RecR protein [Synechococcus sp. WH 8102]
Length = 192
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + E+ + A+A+ +V C C ++
Sbjct: 1 MARLIDQFERLPGIGPRTAQRLALHLLNQPEEQIRQFADALLAARTQVGQCQTCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + +R +I VV D DL ALER++ YHVLGG +SP+D IGPE + +
Sbjct: 61 PECEICRNPERRNGLICVVADSRDLLALERTREFQGRYHVLGGLISPMDGIGPELLHVTP 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ RI + I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LVARINQEDITEVILALTPSVEGDTTSLYLARLLKPF-CPVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 180 TLSRALEGRRPL 191
>gi|188580848|ref|YP_001924293.1| recombination protein RecR [Methylobacterium populi BJ001]
gi|238692886|sp|B1ZGA0|RECR_METPB RecName: Full=Recombination protein recR
gi|179344346|gb|ACB79758.1| recombination protein RecR [Methylobacterium populi BJ001]
Length = 201
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 151/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM +++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRIAADRIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 HACGNVDTSDPCTICRDETRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + I L+ER ++E+I A++AT++GQTTAHY+ + LK + + ITRLA+G+P+G
Sbjct: 121 RPEHLTIALLVERASAPGVKEIILALNATVDGQTTAHYVTESLKPLGLTITRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLTAAIRSRTAF 201
>gi|148653525|ref|YP_001280618.1| recombination protein RecR [Psychrobacter sp. PRwf-1]
gi|172048543|sp|A5WG77|RECR_PSYWF RecName: Full=Recombination protein recR
gi|148572609|gb|ABQ94668.1| DNA replication and repair protein RecR [Psychrobacter sp. PRwf-1]
Length = 195
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ +NL+K L +PG G ++A+R LHL+ + LA+A+ +++ C C
Sbjct: 1 MLTEKFDNLVKQLRVLPGVGQKTAQRMALHLLNGRRGQGSALAQALDIAMHEIIECRQCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C IC+D +RD SV+ VVE AD+ A+E++ Y VLGG LSPLD I +D
Sbjct: 61 SFSDDDICPICVDPRRDDSVLCVVETAADVMAIEQAAGYRGRYFVLGGHLSPLDGINADD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R++ + E+I A S T+EGQTTAH+I + ++ K+TR+A GIPMG EL+
Sbjct: 121 LNIDQLVNRVKTAPVDEIILATSTTVEGQTTAHFIAEAVRRHVGKVTRIAQGIPMGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
YLD T+ +A+++R
Sbjct: 181 YLDSMTLSQALQNR 194
>gi|320094880|ref|ZP_08026618.1| recombination protein R [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978209|gb|EFW09814.1| recombination protein R [Actinomyces sp. oral taxon 178 str. F0338]
Length = 197
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 118/194 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI ++PG GP+SA+R +H+++ E + L +A+ + +V C ICG
Sbjct: 1 MYEGALQDLIDEFGQLPGIGPKSAQRMAIHVLEADEDDVARLVDAINAVRTRVRHCEICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C+IC D +RD + + VV++ D+ A+E ++ YHVLGG + P+ IGPE
Sbjct: 61 NVTEEPTCSICRDARRDPTKVCVVQEPKDIQAVEAARVFRGRYHVLGGVIDPIHGIGPEQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R+ +I E+I A + +EG+ TA Y+ L + ++ +RLA G+PMG++L+
Sbjct: 121 LRIAALMKRLGEGEIAEVILATNPNVEGEATAAYLARMLSTMGIETSRLAMGLPMGADLE 180
Query: 185 YLDDGTIFEAIRSR 198
Y D T+ A+ R
Sbjct: 181 YADAVTLGRALEGR 194
>gi|327480434|gb|AEA83744.1| recombination protein RecR [Pseudomonas stutzeri DSM 4166]
Length = 199
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTRAMEGVGYCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEDELCPQCADPRRDDSLLCVVQSPVDVFAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ R+ E+I A + T+EG+ TAHYI L + I+R+A+G+P+G ELD
Sbjct: 122 GIPELLGRVAGGAFSEVILATNPTVEGEATAHYIAQMLIPKGLTISRIAHGVPLGGELDL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRKPI 197
>gi|227529517|ref|ZP_03959566.1| recombination protein RecR [Lactobacillus vaginalis ATCC 49540]
gi|227350602|gb|EEJ40893.1| recombination protein RecR [Lactobacillus vaginalis ATCC 49540]
Length = 199
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ ++PG G ++A R + + + + A+++ + + CSICGN
Sbjct: 3 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLTMQGDDVTNFAKSLLSAKRDLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE D+ A+ER + LYHVL G +SP+ GPEDI
Sbjct: 63 ITEDDPCPICQDKTRDRSQILVVEQSQDVMAMERMHEYHGLYHVLNGVISPVAGTGPEDI 122
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R+ + +I+E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D
Sbjct: 123 NITSLLDRLKKDDEIKEVIIATNASSDGELTASYLAKLIKPAGIKVTRLAHGLSVGADID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 183 YADEVTLFKAVQGRTEM 199
>gi|22124969|ref|NP_668392.1| recombination protein RecR [Yersinia pestis KIM 10]
gi|45440658|ref|NP_992197.1| recombination protein RecR [Yersinia pestis biovar Microtus str.
91001]
gi|51595344|ref|YP_069535.1| recombination protein RecR [Yersinia pseudotuberculosis IP 32953]
gi|108808605|ref|YP_652521.1| recombination protein RecR [Yersinia pestis Antiqua]
gi|108811133|ref|YP_646900.1| recombination protein RecR [Yersinia pestis Nepal516]
gi|145600016|ref|YP_001164092.1| recombination protein RecR [Yersinia pestis Pestoides F]
gi|149365031|ref|ZP_01887066.1| recombination protein RecR [Yersinia pestis CA88-4125]
gi|153950897|ref|YP_001402017.1| recombination protein RecR [Yersinia pseudotuberculosis IP 31758]
gi|162418312|ref|YP_001607272.1| recombination protein RecR [Yersinia pestis Angola]
gi|165927675|ref|ZP_02223507.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935856|ref|ZP_02224426.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010982|ref|ZP_02231880.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213054|ref|ZP_02239089.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399385|ref|ZP_02304909.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422763|ref|ZP_02314516.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423751|ref|ZP_02315504.1| recombination protein RecR [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468906|ref|ZP_02333610.1| recombination protein RecR [Yersinia pestis FV-1]
gi|218930153|ref|YP_002348028.1| recombination protein RecR [Yersinia pestis CO92]
gi|229838719|ref|ZP_04458878.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896124|ref|ZP_04511294.1| gap repair protein [Yersinia pestis Pestoides A]
gi|229899287|ref|ZP_04514430.1| gap repair protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229901365|ref|ZP_04516487.1| gap repair protein [Yersinia pestis Nepal516]
gi|270489550|ref|ZP_06206624.1| recombination protein RecR [Yersinia pestis KIM D27]
gi|20139502|sp|Q8ZC97|RECR_YERPE RecName: Full=Recombination protein recR
gi|73621532|sp|Q66DP9|RECR_YERPS RecName: Full=Recombination protein recR
gi|123072674|sp|Q1C4P6|RECR_YERPA RecName: Full=Recombination protein recR
gi|123246655|sp|Q1CL30|RECR_YERPN RecName: Full=Recombination protein recR
gi|166223511|sp|A4TPA7|RECR_YERPP RecName: Full=Recombination protein recR
gi|166918743|sp|A7FL89|RECR_YERP3 RecName: Full=Recombination protein recR
gi|238687263|sp|A9R0Q4|RECR_YERPG RecName: Full=Recombination protein recR
gi|21957811|gb|AAM84643.1|AE013709_12 recombination and repair protein [Yersinia pestis KIM 10]
gi|45435516|gb|AAS61074.1| recombination protein RecR [Yersinia pestis biovar Microtus str.
91001]
gi|51588626|emb|CAH20234.1| putative recombination protein, gap repair [Yersinia
pseudotuberculosis IP 32953]
gi|108774781|gb|ABG17300.1| DNA replication and repair protein RecR [Yersinia pestis Nepal516]
gi|108780518|gb|ABG14576.1| DNA replication and repair protein RecR [Yersinia pestis Antiqua]
gi|115348764|emb|CAL21716.1| recombination protein RecR [Yersinia pestis CO92]
gi|145211712|gb|ABP41119.1| DNA replication and repair protein RecR [Yersinia pestis Pestoides
F]
gi|149291444|gb|EDM41518.1| recombination protein RecR [Yersinia pestis CA88-4125]
gi|152962392|gb|ABS49853.1| recombination protein RecR [Yersinia pseudotuberculosis IP 31758]
gi|162351127|gb|ABX85075.1| recombination protein RecR [Yersinia pestis Angola]
gi|165916001|gb|EDR34608.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920429|gb|EDR37706.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989982|gb|EDR42283.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205841|gb|EDR50321.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958354|gb|EDR55375.1| recombination protein RecR [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051889|gb|EDR63297.1| recombination protein RecR [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057921|gb|EDR67667.1| recombination protein RecR [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681294|gb|EEO77388.1| gap repair protein [Yersinia pestis Nepal516]
gi|229687689|gb|EEO79762.1| gap repair protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229695085|gb|EEO85132.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701047|gb|EEO89076.1| gap repair protein [Yersinia pestis Pestoides A]
gi|270338054|gb|EFA48831.1| recombination protein RecR [Yersinia pestis KIM D27]
gi|320016306|gb|ADV99877.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 201
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC++ +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D
Sbjct: 63 FTEQEHCTICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L +R+ + I E+I A + T+EG TA+YI + +R+A+G+P+G EL+
Sbjct: 123 IGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R +
Sbjct: 183 MVDGTTLSHSLAGRNPI 199
>gi|172045849|sp|Q03ZG8|RECR_LEUMM RecName: Full=Recombination protein recR
Length = 201
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R + + E+ + ++A+ + + CSICGN
Sbjct: 3 YPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSICGN 62
Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TDPC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPE
Sbjct: 63 ITATDTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 122
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS+
Sbjct: 123 DINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D+ T+ +A++ RT L
Sbjct: 183 IDYADELTLIKAVQGRTKL 201
>gi|254514490|ref|ZP_05126551.1| recombination protein RecR [gamma proteobacterium NOR5-3]
gi|219676733|gb|EED33098.1| recombination protein RecR [gamma proteobacterium NOR5-3]
Length = 202
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 115/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R LHL+++ + L+ ++A+ +V C C N
Sbjct: 4 FSPAMDALIEGLRCLPGVGPKSAQRMALHLLERNREGALTLSRSLADAVERVGRCQQCRN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC D RD +++ +VE D+ A+E++ Y VL G LSP+D IGPE+I
Sbjct: 64 LAEAVLCGICSDTGRDPTLLCIVETPGDILAIEQAGGYRGRYFVLMGHLSPIDGIGPEEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +++E+I A + T+EG+ TA+YI L+ + +++R+A+G+P+G EL+Y
Sbjct: 124 GLPILEALARDGEVQEVILATNPTVEGEATAYYITRMLEPLIPRLSRIAHGVPLGGELEY 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R
Sbjct: 184 VDGSTLAHAFSGRQP 198
>gi|169627424|ref|YP_001701073.1| recombination protein RecR [Mycobacterium abscessus ATCC 19977]
gi|169239391|emb|CAM60419.1| Recombination protein RecR [Mycobacterium abscessus]
Length = 202
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG
Sbjct: 1 MFEGPVQDLIDELGKLPGVGPKSAQRIAFHLLGVEAPDIDRLTAALTRVRDGVQFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSDKERCRICADPRRDIALVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120
Query: 125 IGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ RI ++ I E+I A EG+ TA Y++ L+ + +TRLA G+PM
Sbjct: 121 LRIRELLTRIGTEEDGVSISEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADELTLGRALSGRRPL 202
>gi|325522012|gb|EGD00696.1| recombination protein RecR [Burkholderia sp. TJI49]
Length = 198
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQTCEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|91775927|ref|YP_545683.1| recombination protein RecR [Methylobacillus flagellatus KT]
gi|123254387|sp|Q1H0Z5|RECR_METFK RecName: Full=Recombination protein recR
gi|91709914|gb|ABE49842.1| DNA replication and repair protein RecR [Methylobacillus
flagellatus KT]
Length = 199
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 119/194 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E L++ L +PG GP+SA R +L+++ + G LA+++ V C++C N
Sbjct: 3 NPPALEQLVEALRCLPGVGPKSALRMAYYLLQRDRKGAGILAKSLDQALQVVSHCNLCNN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C +C RD +++ +VE +DL LE+++ +Y VL G LSPLD IGP DI
Sbjct: 63 FSEQEICPLCASPARDRTLLCIVEMPSDLMMLEQTQTYQGMYFVLMGRLSPLDGIGPRDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R + K+ E+I A + T+EG+ TAHY+ + L+ ++++R+A G+PMG E+++
Sbjct: 123 HLDKLLKRAQDGKVEEVILATNYTVEGEATAHYVSELLRARGIQVSRIARGLPMGGEIEH 182
Query: 186 LDDGTIFEAIRSRT 199
+D GT+ +A+ R
Sbjct: 183 VDSGTLAQALLERR 196
>gi|134295856|ref|YP_001119591.1| recombination protein RecR [Burkholderia vietnamiensis G4]
gi|172044365|sp|A4JEQ3|RECR_BURVG RecName: Full=Recombination protein recR
gi|134139013|gb|ABO54756.1| recombination protein RecR [Burkholderia vietnamiensis G4]
Length = 198
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSSLVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|282882934|ref|ZP_06291539.1| recombination protein RecR [Peptoniphilus lacrimalis 315-B]
gi|281297345|gb|EFA89836.1| recombination protein RecR [Peptoniphilus lacrimalis 315-B]
Length = 201
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
IE LI+ L R+PG GP++A+R H++ + + LA+++ I +KV CS+C N+
Sbjct: 7 PIEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELADSIGTIKSKVKKCSLCCNISD 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TDPC IC D RD S I VV+ D+ A+ER+ LYHVL G +SPL DI
Sbjct: 67 TDPCNICQDNNRDKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFV 126
Query: 129 SLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+R+E K I+E+I A S T++G TA ++++ LK D+K+TR+ YG+P+G +L+Y D
Sbjct: 127 ELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYD 186
Query: 188 DGTIFEAIRSRTVL 201
+ TI A+++R L
Sbjct: 187 EITISAALKNRREL 200
>gi|296157767|ref|ZP_06840601.1| recombination protein RecR [Burkholderia sp. Ch1-1]
gi|295892013|gb|EFG71797.1| recombination protein RecR [Burkholderia sp. Ch1-1]
Length = 198
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGHSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|186475718|ref|YP_001857188.1| recombination protein RecR [Burkholderia phymatum STM815]
gi|229890134|sp|B2JG60|RECR_BURP8 RecName: Full=Recombination protein recR
gi|184192177|gb|ACC70142.1| recombination protein RecR [Burkholderia phymatum STM815]
Length = 198
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDTERDPTLLCVVETPADQIMLEQTMTWRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVKRATDGVVKEVVLATNFTNEGEATAHYLGQTLKSRGLSVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSI 198
>gi|6634573|emb|CAB64470.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPSRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEATLLRAIENRTEL 198
>gi|170692335|ref|ZP_02883498.1| recombination protein RecR [Burkholderia graminis C4D1M]
gi|170142765|gb|EDT10930.1| recombination protein RecR [Burkholderia graminis C4D1M]
Length = 198
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ L A+ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDSERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVKRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|123968736|ref|YP_001009594.1| recombination protein RecR [Prochlorococcus marinus str. AS9601]
gi|166221953|sp|A2BRS6|RECR_PROMS RecName: Full=Recombination protein recR
gi|123198846|gb|ABM70487.1| RecR protein [Prochlorococcus marinus str. AS9601]
Length = 199
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + ++A+ +N V C C N
Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSKALLEAHNNVGRCKKCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE +
Sbjct: 64 LTSEDECEICRNTERNQKLICVVSETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLSPF-TKVTRIAYGLPMGSELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 VDEVTLARALEGRTKL 198
>gi|326795604|ref|YP_004313424.1| recombination protein recR [Marinomonas mediterranea MMB-1]
gi|326546368|gb|ADZ91588.1| Recombination protein recR [Marinomonas mediterranea MMB-1]
Length = 197
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 125/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ L++ L +PG GP+SA++ L+L+++ Q LA A+ + +KV C+ C
Sbjct: 1 MFSPLIKELMESLRCLPGVGPKSAQKMALYLLERDSQGADRLANALRDALDKVGRCATCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+IC+DQ RD + + +VE AD+ A+E + + + Y VL G LSP+D IGPE+
Sbjct: 61 TLTEDTECSICLDQARDGTRLCIVETPADVIAMENAGSFDGRYFVLLGHLSPIDGIGPEE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + E+I A ++TIEG+ T+HYI + LK ++++++RLA G+PMG EL+
Sbjct: 121 LGLDRLENLVRNTDVEEVIIATNSTIEGEATSHYISELLKPLNIELSRLAQGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ A++ R L
Sbjct: 181 YVDGNTLALALKGRKKL 197
>gi|312869737|ref|ZP_07729884.1| recombination protein RecR [Lactobacillus oris PB013-T2-3]
gi|311094786|gb|EFQ53083.1| recombination protein RecR [Lactobacillus oris PB013-T2-3]
Length = 199
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN
Sbjct: 3 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLGMQEDDVTNFAKSLLSAKRDLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE D+ ALER + LYHVL G +SP+ GPEDI
Sbjct: 63 ITEDDPCPICRDKTRDQSQILVVEQSQDIMALERMHEYHGLYHVLHGVISPVAGTGPEDI 122
Query: 126 GIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R + ++++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D
Sbjct: 123 NIASLLKRLQKNEEVKEVIIATNASSDGELTAGYLAKLIKPAQIKVTRLAHGLSVGADID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 183 YADEMTLFKAVQGRTEM 199
>gi|228469550|ref|ZP_04054543.1| recombination protein RecR [Porphyromonas uenonis 60-3]
gi|228308900|gb|EEK17575.1| recombination protein RecR [Porphyromonas uenonis 60-3]
Length = 205
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 122/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + + +E + L+ +PG G ++A R LHL+++ L EA+ ++ K+C C
Sbjct: 1 MKDQYPSQWLERAVDQLSLLPGIGRKTAMRMALHLLRQPPSYAQHLGEAIIDLRQKICYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + + C IC D QRD S + VVE V D+ +E++ LYHVLGG +SP+D I
Sbjct: 61 ERCHCISDSPLCDICSDPQRDQSTVCVVEQVKDVLTIEQTHRYKGLYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I+SL ER++ + +RE+I AI +T+EG TT +YI +L+ V ++ +A GI +G
Sbjct: 121 TPNDLEIESLYERVQEEPVREVILAIRSTLEGDTTNYYIYKRLESTGVLVSLIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ AI +RT
Sbjct: 181 DEIEYADEVTLGSAIANRTPF 201
>gi|197116610|ref|YP_002137037.1| recombination protein RecR [Geobacter bemidjiensis Bem]
gi|226726304|sp|B5E9A4|RECR_GEOBB RecName: Full=Recombination protein recR
gi|197085970|gb|ACH37241.1| recombination protein RecR [Geobacter bemidjiensis Bem]
Length = 197
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 127/196 (64%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L+ L ++PG G +SA+R HL+K + LA+++ + +V LCS+C
Sbjct: 4 FSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHP-SNIEALAQSLLQVGERVHLCSVCFA 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD+ I VVE+ DL ALERS+A + YHVL G+LSPL+ + P+D+
Sbjct: 63 ITEDDPCWICSGE-RDSGTICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKDL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++RE++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y
Sbjct: 122 RIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPVGSDLEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 VDAATVQRAVEGRSEL 197
>gi|239815315|ref|YP_002944225.1| recombination protein RecR [Variovorax paradoxus S110]
gi|239801892|gb|ACS18959.1| recombination protein RecR [Variovorax paradoxus S110]
Length = 196
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 80/193 (41%), Positives = 110/193 (56%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ L+ L R+PG G +SA R HL++ + LA A+ V C C
Sbjct: 4 ASSLDALVDALRRLPGVGVKSASRMAFHLLQHDREGAQLLARALQQAAGNVRHCERCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C++C+D +RDAS + VVE AD ALER+ A Y VL G LSPLD IGP+DIG
Sbjct: 64 TEAPVCSVCLDARRDASKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPKDIG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+Q L +R + E+I A + T EG+ TAH I + L+ + +TRLA G+P GSEL+Y+
Sbjct: 124 LQKLFDRALDGTVSEVILATNFTAEGEATAHVIGEALRQRGLNVTRLARGVPAGSELEYV 183
Query: 187 DDGTIFEAIRSRT 199
D GTI A+ R
Sbjct: 184 DLGTIAHALVDRR 196
>gi|117925037|ref|YP_865654.1| DNA replication and repair protein RecR [Magnetococcus sp. MC-1]
gi|171460778|sp|A0L8F5|RECR_MAGSM RecName: Full=Recombination protein recR
gi|117608793|gb|ABK44248.1| DNA replication and repair protein RecR [Magnetococcus sp. MC-1]
Length = 200
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 125/192 (65%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E I++ +R+PG G +SA+R HL+K+ + L + + + ++ C +C N+
Sbjct: 6 PTLERSIELFSRLPGVGRKSAQRMVYHLLKEGGREATLLGQGLLALSERIHFCEVCHNLA 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
CAIC D +RD +I VVE+ D+ A+ER+ A LYHVLGG LSP+D IGP+ + +
Sbjct: 66 EEGLCAICQDSKRDHGLICVVEEPVDVLAMERAGAYRGLYHVLGGRLSPMDGIGPDALYL 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L+ER++ +RELI A + T+ G+ TAHYI + + + I+RLAYG+PMG EL+YLD
Sbjct: 126 DALLERLQQGGVRELIIATNPTVAGEATAHYITQLAQPLTIDISRLAYGMPMGGELEYLD 185
Query: 188 DGTIFEAIRSRT 199
+ T+F+A++ R
Sbjct: 186 ESTLFQALQGRR 197
>gi|295100447|emb|CBK97992.1| recombination protein RecR [Faecalibacterium prausnitzii L2-6]
Length = 199
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
T +E LI+ ++ PG G + A R ++ + LAEA+ N + ++ C +C
Sbjct: 3 YTAAPLEKLIEQFSQFPGIGRKGATRMAYQVLSMSDADAAALAEAIQNAHTRLHRCRVCQ 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + C IC +RD S I VVE D+ A ER++ + LYHVL G +SP+D IG E
Sbjct: 63 NYTEAELCPICSSAKRDRSTICVVETPRDVQAFERTREYHGLYHVLHGLISPMDGIGAEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ R+ +++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G L+
Sbjct: 123 LSVKELLARLGSGEVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGGSLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T++ A+ R L
Sbjct: 183 YTDETTLYRALSGRDEL 199
>gi|6634588|emb|CAB64482.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKTLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|215432694|ref|ZP_03430613.1| recombination protein RecR [Mycobacterium tuberculosis EAS054]
gi|289755846|ref|ZP_06515224.1| recombination protein recr [Mycobacterium tuberculosis EAS054]
gi|289696433|gb|EFD63862.1| recombination protein recr [Mycobacterium tuberculosis EAS054]
Length = 203
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTSVLAKVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ + E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R VL
Sbjct: 181 GGDLEFADELTLGRALAGRRVL 202
>gi|126696542|ref|YP_001091428.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9301]
gi|166221952|sp|A3PDK2|RECR_PROM0 RecName: Full=Recombination protein recR
gi|126543585|gb|ABO17827.1| RecR protein [Prochlorococcus marinus str. MIT 9301]
Length = 199
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N
Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIREFSKALLEAHSNVGRCKKCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE +
Sbjct: 64 LTSEDECEICRNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 VDEVTLARALEGRTKL 198
>gi|83859369|ref|ZP_00952890.1| recombination protein RecR [Oceanicaulis alexandrii HTCC2633]
gi|83852816|gb|EAP90669.1| recombination protein RecR [Oceanicaulis alexandrii HTCC2633]
Length = 198
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 111/195 (56%), Positives = 147/195 (75%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI++L+++PG GPRSARRA+L L++K++QL+ PLAEAMA+ +K+ C+ CGN
Sbjct: 3 AGPEIERLIQLLSKLPGLGPRSARRASLSLLQKRDQLMKPLAEAMADAADKISACAECGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+D TDPC++C D +RD SVI VVE V DLWALER+ A YHVLGG LS LD +GPED+
Sbjct: 63 LDVTDPCSVCRDHRRDDSVICVVETVGDLWALERAGAFKGRYHVLGGVLSALDGVGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LIER + ++E+I A++AT++GQTTAH++ DKL V IT LA G+P+G ELDY
Sbjct: 123 NVAKLIERANREDVKEVILALNATVDGQTTAHFLADKLAEASVDITSLARGVPVGGELDY 182
Query: 186 LDDGTIFEAIRSRTV 200
LDDGT+ A RSR
Sbjct: 183 LDDGTLTAAFRSRRP 197
>gi|15901507|ref|NP_346111.1| recombination protein RecR [Streptococcus pneumoniae TIGR4]
gi|15903559|ref|NP_359109.1| recombination protein RecR [Streptococcus pneumoniae R6]
gi|111658548|ref|ZP_01409211.1| hypothetical protein SpneT_02000304 [Streptococcus pneumoniae
TIGR4]
gi|116516007|ref|YP_816941.1| recombination protein RecR [Streptococcus pneumoniae D39]
gi|148984110|ref|ZP_01817405.1| recombination protein RecR [Streptococcus pneumoniae SP3-BS71]
gi|148988719|ref|ZP_01820152.1| recombination protein RecR [Streptococcus pneumoniae SP6-BS73]
gi|148993756|ref|ZP_01823183.1| recombination protein RecR [Streptococcus pneumoniae SP9-BS68]
gi|149001956|ref|ZP_01826910.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS69]
gi|149006742|ref|ZP_01830428.1| recombination protein RecR [Streptococcus pneumoniae SP18-BS74]
gi|149011466|ref|ZP_01832713.1| recombination protein RecR [Streptococcus pneumoniae SP19-BS75]
gi|149021234|ref|ZP_01835480.1| recombination protein RecR [Streptococcus pneumoniae SP23-BS72]
gi|168486960|ref|ZP_02711468.1| recombination protein RecR [Streptococcus pneumoniae CDC1087-00]
gi|168491446|ref|ZP_02715589.1| recombination protein RecR [Streptococcus pneumoniae CDC0288-04]
gi|168575139|ref|ZP_02721102.1| recombination protein RecR [Streptococcus pneumoniae MLV-016]
gi|182684614|ref|YP_001836361.1| recombination protein RecR [Streptococcus pneumoniae CGSP14]
gi|194398154|ref|YP_002038286.1| recombination protein RecR [Streptococcus pneumoniae G54]
gi|225857288|ref|YP_002738799.1| recombination protein RecR [Streptococcus pneumoniae P1031]
gi|225861500|ref|YP_002743009.1| recombination protein RecR [Streptococcus pneumoniae Taiwan19F-14]
gi|237650678|ref|ZP_04524930.1| recombination protein RecR [Streptococcus pneumoniae CCRI 1974]
gi|237822436|ref|ZP_04598281.1| recombination protein RecR [Streptococcus pneumoniae CCRI 1974M2]
gi|307068297|ref|YP_003877263.1| recombinational DNA repair ATPase [Streptococcus pneumoniae AP200]
gi|61230232|sp|P0A454|RECR_STRR6 RecName: Full=Recombination protein recR
gi|122278213|sp|Q04J97|RECR_STRP2 RecName: Full=Recombination protein recR
gi|226726311|sp|B5E722|RECR_STRP4 RecName: Full=Recombination protein recR
gi|238691182|sp|B2IRS7|RECR_STRPS RecName: Full=Recombination protein recR
gi|254790789|sp|C1CM11|RECR_STRZP RecName: Full=Recombination protein recR
gi|254790790|sp|C1CST7|RECR_STRZT RecName: Full=Recombination protein recR
gi|269969522|sp|P0CB76|RECR_STRPN RecName: Full=Recombination protein recR
gi|4009464|gb|AAC95434.1| RecM [Streptococcus pneumoniae G54]
gi|6634578|emb|CAB64474.1| recombination protein [Streptococcus pneumoniae]
gi|6634583|emb|CAB64478.1| recombination protein [Streptococcus pneumoniae]
gi|14973164|gb|AAK75751.1| recombination protein RecR [Streptococcus pneumoniae TIGR4]
gi|15459178|gb|AAL00320.1| Recombination protein RecR [Streptococcus pneumoniae R6]
gi|116076583|gb|ABJ54303.1| recombination protein RecR [Streptococcus pneumoniae D39]
gi|147759765|gb|EDK66755.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS69]
gi|147761657|gb|EDK68621.1| recombination protein RecR [Streptococcus pneumoniae SP18-BS74]
gi|147764456|gb|EDK71387.1| recombination protein RecR [Streptococcus pneumoniae SP19-BS75]
gi|147923399|gb|EDK74512.1| recombination protein RecR [Streptococcus pneumoniae SP3-BS71]
gi|147925920|gb|EDK76995.1| recombination protein RecR [Streptococcus pneumoniae SP6-BS73]
gi|147927712|gb|EDK78736.1| recombination protein RecR [Streptococcus pneumoniae SP9-BS68]
gi|147930335|gb|EDK81319.1| recombination protein RecR [Streptococcus pneumoniae SP23-BS72]
gi|182629948|gb|ACB90896.1| recombination protein RecR [Streptococcus pneumoniae CGSP14]
gi|183570091|gb|EDT90619.1| recombination protein RecR [Streptococcus pneumoniae CDC1087-00]
gi|183574138|gb|EDT94666.1| recombination protein RecR [Streptococcus pneumoniae CDC0288-04]
gi|183578849|gb|EDT99377.1| recombination protein RecR [Streptococcus pneumoniae MLV-016]
gi|194357821|gb|ACF56269.1| recombination protein RecR [Streptococcus pneumoniae G54]
gi|225725521|gb|ACO21373.1| recombination protein RecR [Streptococcus pneumoniae P1031]
gi|225727686|gb|ACO23537.1| recombination protein RecR [Streptococcus pneumoniae Taiwan19F-14]
gi|301800483|emb|CBW33122.1| recombination protein RecR [Streptococcus pneumoniae OXC141]
gi|301802374|emb|CBW35128.1| recombination protein RecR [Streptococcus pneumoniae INV200]
gi|306409834|gb|ADM85261.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus
pneumoniae AP200]
gi|332074007|gb|EGI84485.1| recombination protein RecR [Streptococcus pneumoniae GA41301]
gi|332200231|gb|EGJ14304.1| recombination protein RecR [Streptococcus pneumoniae GA47368]
gi|332201097|gb|EGJ15168.1| recombination protein RecR [Streptococcus pneumoniae GA47901]
Length = 198
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|172046636|sp|Q3AJ44|RECR_SYNSC RecName: Full=Recombination protein recR
Length = 191
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C ++
Sbjct: 1 MARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFHLSAD 60
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + +R VI VV D DL ALER++ + YHVLGG +SP+D IGPE + +
Sbjct: 61 PECEICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTE 120
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D+
Sbjct: 121 LVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPF-CSVSRIAYGLPMGSELEYADEV 179
Query: 190 TIFEAIRSRTV 200
T+ A+ R
Sbjct: 180 TLSRALEGRRP 190
>gi|78779491|ref|YP_397603.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. MIT 9312]
gi|123554087|sp|Q31AC8|RECR_PROM9 RecName: Full=Recombination protein recR
gi|78712990|gb|ABB50167.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. MIT 9312]
Length = 199
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 123/196 (62%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N
Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFVLKQPESTIRDFSKALLEAHSNVGRCKKCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE +
Sbjct: 64 FTSEDECEICKNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 VDEVTLARALEGRTKL 198
>gi|332305804|ref|YP_004433655.1| recombination protein RecR [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173133|gb|AEE22387.1| recombination protein RecR [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 200
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I LI +PG GP+SA+R HL+++ L++ + N V C C
Sbjct: 4 SPLILELINAFKVLPGVGPKSAQRMAFHLLERNRSGALQLSQVLHNAMEHVGHCKQCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
++ C IC R +A + +VE D+ A+E++ LY VL G LSP+D IGP +I
Sbjct: 64 TESELCEICAHPTRSEAGTLCIVESPQDVVAIEQTAEFKGLYFVLMGHLSPIDGIGPSEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L ++ K + E+I A + T+EG+ TAHYI D++ TRLA+G+P+G EL+Y
Sbjct: 124 GLDELANLLDNKALNEVILATNPTVEGEATAHYIGQMCSARDIQATRLAHGMPVGGELEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A R L
Sbjct: 184 VDGNTLTHAFVGRRSL 199
>gi|194477243|ref|YP_002049422.1| RecR protein [Paulinella chromatophora]
gi|171192250|gb|ACB43212.1| RecR protein [Paulinella chromatophora]
Length = 203
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI R+PG GPR+A+R LHL+++ E+ + L +A+ Y++V C C +
Sbjct: 9 FTRPLARLIDQFERLPGIGPRTAQRLALHLLRQPEEQIRSLIDALQAAYSQVGQCQCCFH 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC + R ++ +V D DL ALER++ YHVLGG +SP+D IGPE +
Sbjct: 69 LSADVLCEICSNNDRHNGLLCIVADSRDLLALERTREYKGSYHVLGGLISPMDGIGPELL 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
IQSLI+RI+ + E I A++ TIEG TT+ Y+ LK +++R+AYG+P+GSEL+Y
Sbjct: 129 QIQSLIDRIKKDNVTETILALTPTIEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEY 187
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A+ R +
Sbjct: 188 TDEVTLTRALEGRRKI 203
>gi|218261719|ref|ZP_03476454.1| hypothetical protein PRABACTJOHN_02122 [Parabacteroides johnsonii
DSM 18315]
gi|218223826|gb|EEC96476.1| hypothetical protein PRABACTJOHN_02122 [Parabacteroides johnsonii
DSM 18315]
Length = 207
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + L+ +PG G ++A R LH++++ A A+ + V C
Sbjct: 1 MNQKYPSVLLENAVNELSSLPGVGRKTALRLALHMLRRDVGYTEGFASALLALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ + C+IC D QRD S++ VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDNMCSICADHQRDHSMVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL++R+ +++E++ A+S T+EG TT +I KL DVKI+ +A G+ +G
Sbjct: 121 GPGDLQIDSLVQRVAEGEVKEVVLALSTTMEGDTTNFFIYRKLSSYDVKISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIVNRTSF 201
>gi|259502693|ref|ZP_05745595.1| recombination protein R [Lactobacillus antri DSM 16041]
gi|259169338|gb|EEW53833.1| recombination protein R [Lactobacillus antri DSM 16041]
Length = 199
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN
Sbjct: 3 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLGMQEDDVTNFAKSLLSAKRDLHSCSICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S I+VVE D+ ALER + LYHVL G +SP+ GPEDI
Sbjct: 63 ITEDDPCPICRDKTRDQSQILVVEQSQDIMALERMHEYHGLYHVLNGVISPVAGTGPEDI 122
Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I SL++R++ + ++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D
Sbjct: 123 NIASLLKRLQKNEAVKEVIIATNASSDGELTAGYLAKLIKPAQIKVTRLAHGLSVGADID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F+A++ RT +
Sbjct: 183 YADEMTLFKAVQGRTEM 199
>gi|226329025|ref|ZP_03804543.1| hypothetical protein PROPEN_02927 [Proteus penneri ATCC 35198]
gi|225202211|gb|EEG84565.1| hypothetical protein PROPEN_02927 [Proteus penneri ATCC 35198]
Length = 202
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCCDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D
Sbjct: 63 FTEEERCTICANVRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L ER+ + I E+I A + T+EG+ TA+YI + D+ +R+A+G+P+G EL+
Sbjct: 123 IGLDRLEERLSQETISEVILATNPTVEGEATANYIAEICAQYDIAASRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTV 200
+D T+ +I R
Sbjct: 183 MVDGTTLSHSIAGRQK 198
>gi|312796077|ref|YP_004028999.1| Recombination protein recR [Burkholderia rhizoxinica HKI 454]
gi|312167852|emb|CBW74855.1| Recombination protein recR [Burkholderia rhizoxinica HKI 454]
Length = 200
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 1/200 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + LI+ L +PG GP+SA+R HL++ L ++ + + C
Sbjct: 1 MNVK-PPSALAALIEALRTLPGVGPKSAQRIAYHLMQHDRDGAQRLGRSLLHATQALKHC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C D C +C D+QRD +++ VVE AD LE++ A LY VL G LSPLD I
Sbjct: 60 ERCNTFTERDVCELCSDEQRDPTLLCVVETPADQVMLEQTLAYCGLYFVLMGRLSPLDGI 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP +I + L+ R + E++ A + T EG+ TAHY+ LK + +TRLA G+P+G
Sbjct: 120 GPREIHFERLMRRATDGVVSEVVLATNFTNEGEATAHYLGQMLKARGLTVTRLARGVPVG 179
Query: 181 SELDYLDDGTIFEAIRSRTV 200
EL+Y+D GTI A+ R
Sbjct: 180 GELEYVDAGTIARAVLDRRS 199
>gi|309790309|ref|ZP_07684876.1| recombination protein RecR [Oscillochloris trichoides DG6]
gi|308227643|gb|EFO81304.1| recombination protein RecR [Oscillochloris trichoides DG6]
Length = 203
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 117/200 (58%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
+ I + + LI+ L+++PG GP++A R T L++ +E + LA+A+ + +V C+
Sbjct: 4 ENAIIVEPVARLIEELSKLPGIGPKTASRLTFFLLRAEEGQVQALAQALLAVKEQVRFCT 63
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
C N+ C IC D RD S I VVE+ D+ A+ER+ A LYHVL G ++PL+ I
Sbjct: 64 RCFNITVAPLCPICQDTNRDQSKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIY 123
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
E + I LI R+ + + E++ A++ EG+ TA ++ L + V++TR A G+P G
Sbjct: 124 REHLKIDELITRVRSEPVDEVVLAMNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGG 183
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
+L++ D T+ A++ R L
Sbjct: 184 DLEWADPETLGSAMQGRREL 203
>gi|289167462|ref|YP_003445731.1| recombination protein [Streptococcus mitis B6]
gi|288907029|emb|CBJ21863.1| recombination protein [Streptococcus mitis B6]
Length = 198
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVATMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|189500125|ref|YP_001959595.1| recombination protein RecR [Chlorobium phaeobacteroides BS1]
gi|229890139|sp|B3EQT3|RECR_CHLPB RecName: Full=Recombination protein recR
gi|189495566|gb|ACE04114.1| recombination protein RecR [Chlorobium phaeobacteroides BS1]
Length = 204
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI+ A++PG G ++A+R ++H++++K + L+ A+ ++ KV CSIC
Sbjct: 2 RYTSTAIEALIEEFAKLPGIGRKTAQRLSMHILQEKPGEVEKLSRALTDVKEKVISCSIC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV DPC+IC + RD S I VVE D+ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNVTDRGDDPCSICRGKGRDLSKICVVESPPDVLAFEKTAQYRGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIER---IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ R + +++ E+I A+S T+EG+TT Y+ LK + +++T++A GIP
Sbjct: 122 PDDIKVKELLARLSLQDGREVSEVIMALSPTVEGETTVLYVSRLLKPLGIEVTKIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+EL+Y+D+ T+ A+ R+VL
Sbjct: 182 VGAELEYIDEATLSRAMEGRSVL 204
>gi|193212498|ref|YP_001998451.1| recombination protein RecR [Chlorobaculum parvum NCIB 8327]
gi|229890138|sp|B3QMU8|RECR_CHLP8 RecName: Full=Recombination protein recR
gi|193085975|gb|ACF11251.1| recombination protein RecR [Chlorobaculum parvum NCIB 8327]
Length = 204
Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 78/202 (38%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + +E LI+ A++PG G ++A+R T+H+++++ + LA A+ ++ KV CSIC
Sbjct: 2 RYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSIC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
N+ TDPC +C RD SVI VVE ++ A E++ LYHVL G +SPLD +G
Sbjct: 62 QNITDLGTDPCLLCTSTGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVG 121
Query: 122 PEDIGIQSLIERIE---VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
P+DI ++ L+ RI +RE++ A++ T+EG+TT+ YI LK + + +TR+A GIP
Sbjct: 122 PDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGIP 181
Query: 179 MGSELDYLDDGTIFEAIRSRTV 200
+G+EL+++D+ T+ A+ R+
Sbjct: 182 VGAELEFIDEATLSRAMDGRSA 203
>gi|254526541|ref|ZP_05138593.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9202]
gi|221537965|gb|EEE40418.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9202]
Length = 199
Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N
Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSKALLEAHSNVGRCKKCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + D C IC + QR+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE +
Sbjct: 64 LTSEDECEICKNTQRNQKLICVVSETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 VDEVTLARALEGRTNL 198
>gi|227487305|ref|ZP_03917621.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092731|gb|EEI28043.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51867]
Length = 207
Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 10/207 (4%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI +R+PG GP+SA+R HL+ ++ + L A+ + V C IC
Sbjct: 1 MFEGPFQELIDEFSRLPGIGPKSAQRIAFHLINAEDDSVERLISALTGVVGGVSFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + + C IC + +RDA+ I VVE+ D+ +ER+ YHVLGG+L PL IGP++
Sbjct: 61 NISSDEVCTICANPERDATTICVVEEPKDIQVIERTGEYTGRYHVLGGALDPLGGIGPKE 120
Query: 125 IGIQSLIERIEV---------KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLA 174
+ I L+ R+ I E+I A EG+ TA Y+ LK + ++RLA
Sbjct: 121 LNITQLVRRVGGTLPDVSSGVPDIAEVILATDPNTEGEATASYLARLLKDFSGLTVSRLA 180
Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201
G+P+G +L+++D+ T+ A+ R +
Sbjct: 181 SGMPLGGDLEFVDELTLSRALSGRLKI 207
>gi|313888962|ref|ZP_07822622.1| recombination protein RecR [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845135|gb|EFR32536.1| recombination protein RecR [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 200
Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I IE+LIK L R+PG G ++A+R +++ E + LAEA+ + N C
Sbjct: 1 MTKEIG--PIEDLIKRLNRLPGIGSKTAQRLAYYIIGLDETEVRDLAEALISAKNNTVEC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SIC N +DPC IC ++ RD SVI VVE D+ A+ERS + YHVL G +SPL
Sbjct: 59 SICMNYADSDPCEICSNKNRDDSVICVVESPKDVDAMERSLSFRGKYHVLHGVISPLKGK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PED+ I+ LI+RIE I+E+I A + T++G TA YI + L+ D+ ++R+ YG+P+G
Sbjct: 119 TPEDVTIKELIKRIEEGDIKEVIVATNPTVDGDATARYIKNILEDYDIIVSRIGYGLPVG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+L+Y D+ TI A+ +R L
Sbjct: 179 GDLEYYDEITIQTAMENRRRL 199
>gi|332971117|gb|EGK10084.1| recombination protein R [Psychrobacter sp. 1501(2011)]
Length = 195
Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 120/194 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ +NL+K L +PG G ++A+R LHL+ K LA+A+ + + C C
Sbjct: 1 MLTEKFDNLVKQLRVLPGVGQKTAQRMALHLLNGKRPQGSALAQALDIAMHDIIECRQCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC+D +RD V+ VVE AD+ A+E+S Y VLGG LSPLD I +D
Sbjct: 61 SFSDDEVCPICLDPRRDDRVLCVVETAADVMAIEQSAGYRGRYFVLGGHLSPLDGINADD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R++ + ELI A S T+EGQTTAH+I + ++ K+TR+A GIPMG EL+
Sbjct: 121 LNIDQLVSRVKASPVEELILATSTTVEGQTTAHFISEAVRRHVGKVTRIAQGIPMGGELE 180
Query: 185 YLDDGTIFEAIRSR 198
YLD T+ +A+++R
Sbjct: 181 YLDSMTLSQALQNR 194
>gi|227542726|ref|ZP_03972775.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181492|gb|EEI62464.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC
51866]
Length = 207
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 10/207 (4%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + LI +R+PG GP+SA+R HL+ ++ + L A+ + V C IC
Sbjct: 1 MFEGPFQELIDEFSRLPGIGPKSAQRIAFHLINAEDDSVERLISALTGVVGGVSFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + + C IC + +RDA+ I VVE+ D+ +ER+ YHVLGG+L PL IGP++
Sbjct: 61 NISSDEVCTICANPERDATTICVVEEPKDIQVIERTGEYTGRYHVLGGALDPLGGIGPKE 120
Query: 125 IGIQSLIERIEV---------KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLA 174
+ I L+ R+ I E+I A EG+ TA Y+ LK + ++RLA
Sbjct: 121 LNITQLVRRVGGTLPDVSSDVPDIAEVILATDPNTEGEATASYLARLLKDFSGLTVSRLA 180
Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201
G+P+G +L+++D+ T+ A+ R +
Sbjct: 181 SGMPLGGDLEFVDELTLSRALSGRLKI 207
>gi|118619460|ref|YP_907792.1| recombination protein RecR [Mycobacterium ulcerans Agy99]
gi|171460880|sp|A0PVF2|RECR_MYCUA RecName: Full=Recombination protein recR
gi|118571570|gb|ABL06321.1| recombination protein RecR [Mycobacterium ulcerans Agy99]
Length = 203
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+ PL IGPE
Sbjct: 61 NVSDDERCRICADPRRDGALVCVVEEPKDIQAVERTREYRGRYHVLGGAFDPLSGIGPEQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALTGRRAM 202
>gi|78066595|ref|YP_369364.1| recombination protein RecR [Burkholderia sp. 383]
gi|107028996|ref|YP_626091.1| recombination protein RecR [Burkholderia cenocepacia AU 1054]
gi|116689846|ref|YP_835469.1| recombination protein RecR [Burkholderia cenocepacia HI2424]
gi|170733185|ref|YP_001765132.1| recombination protein RecR [Burkholderia cenocepacia MC0-3]
gi|206560260|ref|YP_002231024.1| recombination protein RecR [Burkholderia cenocepacia J2315]
gi|254248059|ref|ZP_04941380.1| Recombination protein RecR [Burkholderia cenocepacia PC184]
gi|123179928|sp|Q1BGY7|RECR_BURCA RecName: Full=Recombination protein recR
gi|123568319|sp|Q39FP6|RECR_BURS3 RecName: Full=Recombination protein recR
gi|171855182|sp|A0K7U9|RECR_BURCH RecName: Full=Recombination protein recR
gi|229890131|sp|B1JTA5|RECR_BURCC RecName: Full=Recombination protein recR
gi|229890132|sp|B4EAY2|RECR_BURCJ RecName: Full=Recombination protein recR
gi|77967340|gb|ABB08720.1| RecR protein [Burkholderia sp. 383]
gi|105898160|gb|ABF81118.1| recombination protein RecR [Burkholderia cenocepacia AU 1054]
gi|116647935|gb|ABK08576.1| recombination protein RecR [Burkholderia cenocepacia HI2424]
gi|124872835|gb|EAY64551.1| Recombination protein RecR [Burkholderia cenocepacia PC184]
gi|169816427|gb|ACA91010.1| recombination protein RecR [Burkholderia cenocepacia MC0-3]
gi|198036301|emb|CAR52197.1| recombination protein [Burkholderia cenocepacia J2315]
Length = 198
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 108/195 (55%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R +HL++ + L ++ + C C
Sbjct: 4 PSALSALVEALRVLPGVGPKSAQRMAVHLMQHDREGAERLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRTM 198
>gi|319793178|ref|YP_004154818.1| recombination protein recr [Variovorax paradoxus EPS]
gi|315595641|gb|ADU36707.1| recombination protein RecR [Variovorax paradoxus EPS]
Length = 196
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 109/193 (56%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ L+ L R+PG G +SA R HL++ L+ A+ V C +C
Sbjct: 4 ASSLDALVDALRRLPGVGVKSASRMAFHLLQHDRDGAQLLSRALQQAAGNVRHCELCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C++C+D +RD + + VVE AD ALER+ A Y VL G LSPLD IGP+DIG
Sbjct: 64 TEAPICSVCMDSRRDGTKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPKDIG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+Q L +R + E+I A + T EG+ TAH I + LK + +TRLA G+P GSEL+Y+
Sbjct: 124 LQKLFDRALDGTVSEVILATNFTAEGEATAHVIGEALKQRGLTVTRLARGVPAGSELEYV 183
Query: 187 DDGTIFEAIRSRT 199
D GTI A+ R
Sbjct: 184 DLGTIAHALVDRR 196
>gi|302035665|ref|YP_003795987.1| recombination protein recR [Candidatus Nitrospira defluvii]
gi|300603729|emb|CBK40060.1| Recombination protein recR [Candidatus Nitrospira defluvii]
Length = 200
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L R+PG G +SA+R HL+K + + LAEA+ + + + C C N+
Sbjct: 9 LAKLVRELVRLPGIGQKSAQRLAFHLLKAEREDAMRLAEAIQAVKDGLSFCRQCRNIAEG 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +RD S I+V+E+ + L+A+ER+ LYHVL G LSPLD +GP DI +
Sbjct: 69 ELCEFCRDPKRDRSKILVIEEPSTLYAIERAGGYRGLYHVLLGVLSPLDGVGPSDIRAEE 128
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++R++ + E+I A + TIEG+ TA Y+ LK V++TR+AYGIP+G +++Y D+
Sbjct: 129 LLDRVKAGGVEEVIVATNPTIEGEATAIYLTRLLKPHHVRVTRIAYGIPVGMDIEYADEV 188
Query: 190 TIFEAIRSRTVL 201
T+ ++I R L
Sbjct: 189 TLVKSIEGRRDL 200
>gi|86131773|ref|ZP_01050370.1| recombination protein RecR [Dokdonia donghaensis MED134]
gi|85817595|gb|EAQ38769.1| recombination protein RecR [Dokdonia donghaensis MED134]
Length = 205
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 126/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+++ E L EA+ + + + C C
Sbjct: 2 EFSSKLLENAVYEMSQLPGVGKRTALRLVLHLLRQPENQTHHLTEALNTMRDTIKFCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + RDAS++ VVEDV D+ A+E + LYHVLGG +SPLD +GP+
Sbjct: 62 HNISDVELCEICSNPNRDASLVCVVEDVRDVMAIENTSQYRGLYHVLGGKISPLDGVGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLI++ + +++E+IFA+S+T+EG TT YI +L+ D+K + +A GI +G EL
Sbjct: 122 DLNIYSLIDKAKSGEVKEVIFALSSTMEGDTTNFYIYRQLEAYDIKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILHRIPF 199
>gi|312882072|ref|ZP_07741822.1| recombination protein RecR [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370208|gb|EFP97710.1| recombination protein RecR [Vibrio caribbenthicus ATCC BAA-2122]
Length = 189
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C + C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCSECRTFTEQEICH 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ L
Sbjct: 61 ICTNPKRQENGQICVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDVLDY 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + E+I A + T+EG+ TAHYI + + V+ +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLRRGDVSEVILATNPTVEGEATAHYIAELCREHSVEASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R +
Sbjct: 181 HSLLGRHKI 189
>gi|88857871|ref|ZP_01132513.1| recombination protein recR [Pseudoalteromonas tunicata D2]
gi|88819488|gb|EAR29301.1| recombination protein recR [Pseudoalteromonas tunicata D2]
Length = 202
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ LI L +PG GP+SA+R HL+++ L +A+ N KV C C
Sbjct: 4 SASLTQLISSLRCLPGIGPKSAQRIAFHLLERDRDGGRQLGQALTNAMAKVGHCQTCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C + +R D+ ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++I
Sbjct: 64 CEEPVCELCQNVKRIDSGLLCVVESPSDVLAIEQTGQYSGRYFVLMGHLSPLDGIGPKEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L + I E+I A + T+EG+TTAH+I + + + +R+A+G+P+G ELD
Sbjct: 124 GLDELEVQFSQGHITEVILATNPTVEGETTAHFIAELCQKYHIAASRIAHGVPVGGELDL 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R
Sbjct: 184 VDGKTLAHAFNGRKT 198
>gi|313886627|ref|ZP_07820339.1| recombination protein RecR [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299535|ref|YP_004441456.1| Recombination protein recR [Porphyromonas asaccharolytica DSM
20707]
gi|312923923|gb|EFR34720.1| recombination protein RecR [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176598|gb|AEE12288.1| Recombination protein recR [Porphyromonas asaccharolytica DSM
20707]
Length = 205
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ + + +E + L+ +PG G ++A R LHL+++ L EA+ ++ K+C C
Sbjct: 1 MKDQYPSQWLERAVDQLSLLPGIGRKTAMRMALHLLRQPPSYAQHLGEAIIDLRQKICYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + + C IC D QRD SV+ VVE V D+ +E++ LYHVLGG +SP+D I
Sbjct: 61 ERCHCISDSPLCDICSDPQRDQSVVCVVEQVKDVLTIEQTHRYKGLYHVLGGIISPIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P D+ I+SL ER++ + IRE+I AI +T+EG TT +YI +L+ V ++ +A GI +G
Sbjct: 121 TPNDLEIESLYERVQEEPIREVILAIRSTLEGDTTNYYIYKRLESTGVLVSLIARGISIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ AI +RT
Sbjct: 181 DEIEYADEVTLGSAIANRTPF 201
>gi|91783457|ref|YP_558663.1| recombination protein RecR [Burkholderia xenovorans LB400]
gi|123358829|sp|Q13Z78|RECR_BURXL RecName: Full=Recombination protein recR
gi|91687411|gb|ABE30611.1| RecR protein [Burkholderia xenovorans LB400]
Length = 198
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|15610851|ref|NP_218232.1| recombination protein RecR [Mycobacterium tuberculosis H37Rv]
gi|15843336|ref|NP_338373.1| recombination protein RecR [Mycobacterium tuberculosis CDC1551]
gi|31794887|ref|NP_857380.1| recombination protein RecR [Mycobacterium bovis AF2122/97]
gi|121639631|ref|YP_979855.1| recombination protein RecR [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663580|ref|YP_001285103.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
gi|148824920|ref|YP_001289674.1| recombination protein RecR [Mycobacterium tuberculosis F11]
gi|167970870|ref|ZP_02553147.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
gi|215405767|ref|ZP_03417948.1| recombination protein RecR [Mycobacterium tuberculosis 02_1987]
gi|215413642|ref|ZP_03422310.1| recombination protein RecR [Mycobacterium tuberculosis 94_M4241A]
gi|215424958|ref|ZP_03422877.1| recombination protein RecR [Mycobacterium tuberculosis T92]
gi|218755499|ref|ZP_03534295.1| recombination protein RecR [Mycobacterium tuberculosis GM 1503]
gi|219559798|ref|ZP_03538874.1| recombination protein RecR [Mycobacterium tuberculosis T17]
gi|224992127|ref|YP_002646816.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800761|ref|YP_003033762.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435]
gi|254233210|ref|ZP_04926536.1| recombination protein recR [Mycobacterium tuberculosis C]
gi|254366260|ref|ZP_04982304.1| recombination protein recR [Mycobacterium tuberculosis str.
Haarlem]
gi|254552825|ref|ZP_05143272.1| recombination protein RecR [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184636|ref|ZP_05762110.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
gi|260198760|ref|ZP_05766251.1| recombination protein RecR [Mycobacterium tuberculosis T46]
gi|260202916|ref|ZP_05770407.1| recombination protein RecR [Mycobacterium tuberculosis K85]
gi|289441151|ref|ZP_06430895.1| recombination protein RecR [Mycobacterium tuberculosis T46]
gi|289445314|ref|ZP_06435058.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
gi|289555980|ref|ZP_06445190.1| recombination protein recR [Mycobacterium tuberculosis KZN 605]
gi|289571959|ref|ZP_06452186.1| recombination protein recR [Mycobacterium tuberculosis T17]
gi|289572366|ref|ZP_06452593.1| recombination protein recR [Mycobacterium tuberculosis K85]
gi|289747554|ref|ZP_06506932.1| recombination protein recr [Mycobacterium tuberculosis 02_1987]
gi|289748233|ref|ZP_06507611.1| recombination protein recR [Mycobacterium tuberculosis T92]
gi|289763896|ref|ZP_06523274.1| recombination protein recR [Mycobacterium tuberculosis GM 1503]
gi|297636393|ref|ZP_06954173.1| recombination protein RecR [Mycobacterium tuberculosis KZN 4207]
gi|297733387|ref|ZP_06962505.1| recombination protein RecR [Mycobacterium tuberculosis KZN R506]
gi|298527192|ref|ZP_07014601.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A]
gi|306778072|ref|ZP_07416409.1| recombination protein recR [Mycobacterium tuberculosis SUMu001]
gi|306778604|ref|ZP_07416941.1| recombination protein recR [Mycobacterium tuberculosis SUMu002]
gi|306786627|ref|ZP_07424949.1| recombination protein recR [Mycobacterium tuberculosis SUMu003]
gi|306790993|ref|ZP_07429315.1| recombination protein recR [Mycobacterium tuberculosis SUMu004]
gi|306791312|ref|ZP_07429614.1| recombination protein recR [Mycobacterium tuberculosis SUMu005]
gi|306795377|ref|ZP_07433679.1| recombination protein recR [Mycobacterium tuberculosis SUMu006]
gi|306801348|ref|ZP_07438016.1| recombination protein recR [Mycobacterium tuberculosis SUMu008]
gi|306805559|ref|ZP_07442227.1| recombination protein recR [Mycobacterium tuberculosis SUMu007]
gi|306969956|ref|ZP_07482617.1| recombination protein recR [Mycobacterium tuberculosis SUMu009]
gi|306974189|ref|ZP_07486850.1| recombination protein recR [Mycobacterium tuberculosis SUMu010]
gi|307081897|ref|ZP_07491067.1| recombination protein recR [Mycobacterium tuberculosis SUMu011]
gi|307086510|ref|ZP_07495623.1| recombination protein recR [Mycobacterium tuberculosis SUMu012]
gi|313660718|ref|ZP_07817598.1| recombination protein RecR [Mycobacterium tuberculosis KZN V2475]
gi|54039039|sp|P65991|RECR_MYCBO RecName: Full=Recombination protein recR
gi|54041798|sp|P65990|RECR_MYCTU RecName: Full=Recombination protein recR
gi|171704440|sp|A1KQ47|RECR_MYCBP RecName: Full=Recombination protein recR
gi|172047917|sp|A5U941|RECR_MYCTA RecName: Full=Recombination protein recR
gi|2960139|emb|CAA18037.1| PROBABLE RECOMBINATION PROTEIN RECR [Mycobacterium tuberculosis
H37Rv]
gi|13883698|gb|AAK48187.1| recR protein [Mycobacterium tuberculosis CDC1551]
gi|31620485|emb|CAD95928.1| RECOMBINATION PROTEIN RECR [Mycobacterium bovis AF2122/97]
gi|121495279|emb|CAL73765.1| Recombination protein recR [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124603003|gb|EAY61278.1| recombination protein recR [Mycobacterium tuberculosis C]
gi|134151772|gb|EBA43817.1| recombination protein recR [Mycobacterium tuberculosis str.
Haarlem]
gi|148507732|gb|ABQ75541.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
gi|148723447|gb|ABR08072.1| recombination protein recR [Mycobacterium tuberculosis F11]
gi|224775242|dbj|BAH28048.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322264|gb|ACT26867.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435]
gi|289414070|gb|EFD11310.1| recombination protein RecR [Mycobacterium tuberculosis T46]
gi|289418272|gb|EFD15473.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
gi|289440612|gb|EFD23105.1| recombination protein recR [Mycobacterium tuberculosis KZN 605]
gi|289536797|gb|EFD41375.1| recombination protein recR [Mycobacterium tuberculosis K85]
gi|289545713|gb|EFD49361.1| recombination protein recR [Mycobacterium tuberculosis T17]
gi|289688082|gb|EFD55570.1| recombination protein recr [Mycobacterium tuberculosis 02_1987]
gi|289688820|gb|EFD56249.1| recombination protein recR [Mycobacterium tuberculosis T92]
gi|289711402|gb|EFD75418.1| recombination protein recR [Mycobacterium tuberculosis GM 1503]
gi|298496986|gb|EFI32280.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A]
gi|308213601|gb|EFO73000.1| recombination protein recR [Mycobacterium tuberculosis SUMu001]
gi|308328334|gb|EFP17185.1| recombination protein recR [Mycobacterium tuberculosis SUMu002]
gi|308328738|gb|EFP17589.1| recombination protein recR [Mycobacterium tuberculosis SUMu003]
gi|308332580|gb|EFP21431.1| recombination protein recR [Mycobacterium tuberculosis SUMu004]
gi|308340071|gb|EFP28922.1| recombination protein recR [Mycobacterium tuberculosis SUMu005]
gi|308344061|gb|EFP32912.1| recombination protein recR [Mycobacterium tuberculosis SUMu006]
gi|308347859|gb|EFP36710.1| recombination protein recR [Mycobacterium tuberculosis SUMu007]
gi|308351847|gb|EFP40698.1| recombination protein recR [Mycobacterium tuberculosis SUMu008]
gi|308352512|gb|EFP41363.1| recombination protein recR [Mycobacterium tuberculosis SUMu009]
gi|308356462|gb|EFP45313.1| recombination protein recR [Mycobacterium tuberculosis SUMu010]
gi|308360409|gb|EFP49260.1| recombination protein recR [Mycobacterium tuberculosis SUMu011]
gi|308364105|gb|EFP52956.1| recombination protein recR [Mycobacterium tuberculosis SUMu012]
gi|323717579|gb|EGB26781.1| recombination protein recR [Mycobacterium tuberculosis CDC1551A]
gi|328460489|gb|AEB05912.1| recombination protein recR [Mycobacterium tuberculosis KZN 4207]
Length = 203
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ + E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R VL
Sbjct: 181 GGDLEFADELTLGRALAGRRVL 202
>gi|303258601|ref|ZP_07344581.1| recombination protein RecR [Streptococcus pneumoniae SP-BS293]
gi|303262688|ref|ZP_07348628.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS292]
gi|303263628|ref|ZP_07349550.1| recombination protein RecR [Streptococcus pneumoniae BS397]
gi|303266389|ref|ZP_07352278.1| recombination protein RecR [Streptococcus pneumoniae BS457]
gi|303268262|ref|ZP_07354060.1| recombination protein RecR [Streptococcus pneumoniae BS458]
gi|302636244|gb|EFL66739.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS292]
gi|302640102|gb|EFL70557.1| recombination protein RecR [Streptococcus pneumoniae SP-BS293]
gi|302642213|gb|EFL72562.1| recombination protein RecR [Streptococcus pneumoniae BS458]
gi|302644089|gb|EFL74347.1| recombination protein RecR [Streptococcus pneumoniae BS457]
gi|302646666|gb|EFL76891.1| recombination protein RecR [Streptococcus pneumoniae BS397]
Length = 198
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDSTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|77166053|ref|YP_344578.1| RecR protein [Nitrosococcus oceani ATCC 19707]
gi|254436341|ref|ZP_05049847.1| recombination protein RecR [Nitrosococcus oceani AFC27]
gi|123593516|sp|Q3J7Z8|RECR_NITOC RecName: Full=Recombination protein recR
gi|76884367|gb|ABA59048.1| DNA replication and repair protein RecR [Nitrosococcus oceani ATCC
19707]
gi|207088031|gb|EDZ65304.1| recombination protein RecR [Nitrosococcus oceani AFC27]
Length = 199
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G + L++ L +PG GP+SA+R HL++ + LA+A+ +K+ C C
Sbjct: 3 LFGLSLGRLLEALRCLPGVGPKSAQRMAFHLLESDREGGRHLAQALLEALDKMTHCQTCR 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ TD C++C D +RD + VVE +D+ A+E++ + + Y VL G LSPLD +GPE
Sbjct: 63 ILSETDLCSLCADSRRDRGQLCVVEMPSDVQAIEQATSYSGRYFVLMGHLSPLDGVGPEA 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R++ +IRE+I A + T+EG+ TA+YI + + + TR+A+G+P+G EL+
Sbjct: 123 LGMDLLAKRLDTDQIREVILATNLTVEGEATAYYISELAQTRGITTTRIAHGVPLGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
++D T+ A +SR L
Sbjct: 183 FIDSNTLSHAFQSRRHL 199
>gi|171463392|ref|YP_001797505.1| recombination protein RecR [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470334|sp|B1XU64|RECR_POLNS RecName: Full=Recombination protein recR
gi|171192930|gb|ACB43891.1| recombination protein RecR [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 204
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 112/195 (57%), Gaps = 4/195 (2%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ L +PG GP+SA+R +L++ LA+++ V C+ C
Sbjct: 10 ALGRLIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVETVGHCACCNTFSE 69
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
T C+ C D++RD S++ +VE AD +E++ + Y VL G LSPLD +GP +I
Sbjct: 70 TQVCSTCSDERRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFD 129
Query: 129 SLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
L+ RIE IRE++ A + T EG+ TAHYI + LK +K+TR+A GIP+G EL+
Sbjct: 130 RLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRIARGIPVGGELE 189
Query: 185 YLDDGTIFEAIRSRT 199
Y+D GT+ A+ R
Sbjct: 190 YVDAGTLARALMDRR 204
>gi|227431247|ref|ZP_03913301.1| recombination protein RecR [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227353009|gb|EEJ43181.1| recombination protein RecR [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 213
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 122/199 (61%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R T + + E+ + ++A+ + + CSICGN
Sbjct: 15 YPEPIAKLIDSYTKLPGIGPKTATRLTFYTLGMNEEDVQDFSKALISAKTDLTFCSICGN 74
Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ TDPC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPE
Sbjct: 75 ITATDTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 134
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS+
Sbjct: 135 DINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSD 194
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D+ T+ +A++ RT L
Sbjct: 195 IDYADELTLIKAVQGRTKL 213
>gi|104780941|ref|YP_607439.1| recombination protein RecR [Pseudomonas entomophila L48]
gi|122403933|sp|Q1ICI0|RECR_PSEE4 RecName: Full=Recombination protein recR
gi|95109928|emb|CAK14633.1| recombination protein recR [Pseudomonas entomophila L48]
Length = 200
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C C
Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEQELCPQCADPRRDDTQLCVVEGPVDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + TR+A+G+P+G EL+
Sbjct: 122 GIPQLMARIEEQGTFSEVILATNPTVEGEATAHYIAQLLAEKGLTATRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ A R +
Sbjct: 182 LVDGGTLAHAFAGRRPI 198
>gi|285017410|ref|YP_003375121.1| recombination protein recr [Xanthomonas albilineans GPE PC73]
gi|283472628|emb|CBA15133.1| probable recombination protein recr [Xanthomonas albilineans]
Length = 204
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 113/196 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI+ +PG G ++A+R H+++++ LA+ + +V C+ C
Sbjct: 1 MSSPLLEQLIEAFRILPGVGQKTAQRMAYHVLERERAGGQRLADTLHAAIARVGHCTQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ TD CAIC RD + VVE AD A+E++ LY +L G LSPLD IGP +
Sbjct: 61 DFSETDICAICASPGRDRQQLCVVESPADRLAIEQATGYRGLYFILQGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R+ ++ ELI A ++T+EG+ TAHY+ + V+ +RLA G+P+G EL+
Sbjct: 121 LGLDRLGARLAQGEVAELIIATNSTVEGEATAHYLAQLARQHGVRPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D GT+ A SR
Sbjct: 181 YVDRGTLSHAFGSRNE 196
>gi|212694992|ref|ZP_03303120.1| hypothetical protein BACDOR_04529 [Bacteroides dorei DSM 17855]
gi|212662445|gb|EEB23019.1| hypothetical protein BACDOR_04529 [Bacteroides dorei DSM 17855]
Length = 198
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 127/192 (66%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + A++PG G ++A R LHL+++ ++ AM + ++V C +C N+ T
Sbjct: 3 LEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYCKVCHNISDT 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D IGP D+ I+S
Sbjct: 63 ETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGIGPSDLQIES 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G EL+Y D+
Sbjct: 123 LVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIGDELEYTDEV 182
Query: 190 TIFEAIRSRTVL 201
T+ +I +RT+
Sbjct: 183 TLGRSIINRTLF 194
>gi|170749550|ref|YP_001755810.1| recombination protein RecR [Methylobacterium radiotolerans JCM
2831]
gi|238688893|sp|B1M6N6|RECR_METRJ RecName: Full=Recombination protein recR
gi|170656072|gb|ACB25127.1| recombination protein RecR [Methylobacterium radiotolerans JCM
2831]
Length = 201
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 115/201 (57%), Positives = 157/201 (78%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA L L+KK++ LLGPLA+AM +++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKRDTLLGPLADAMRVAADRIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CGNVDT+DPC IC D +RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD +
Sbjct: 61 TSCGNVDTSDPCTICRDAERDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE + + SL+ER+ ++ E+I A++AT++GQTTAHY+ + ++ DVK+TRLA+G+P+G
Sbjct: 121 RPEHLNLASLVERVARPEVTEVILALNATVDGQTTAHYVTESIRHCDVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIRSRT
Sbjct: 181 GELDYLDEGTLSAAIRSRTAF 201
>gi|74316535|ref|YP_314275.1| recombination protein RecR [Thiobacillus denitrificans ATCC 25259]
gi|123612290|sp|Q3SLE3|RECR_THIDA RecName: Full=Recombination protein recR
gi|74056030|gb|AAZ96470.1| RecR protein [Thiobacillus denitrificans ATCC 25259]
Length = 197
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 114/197 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +E+LI L +PG GP+SA R HL+++ + LA A+ + + C +C
Sbjct: 1 MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + C +C +RD + VVE AD +E +++ N LY VL G LSPLD IGP +
Sbjct: 61 NFSEAEVCEVCASTRRDRRQLAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I + LI R + E+I A + T EG+ TAH I + LK +K++RLA G+P+G EL+
Sbjct: 121 IHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLKARGLKVSRLARGVPVGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ +A+R R L
Sbjct: 181 YVDSGTLAQAVRDRRAL 197
>gi|145221880|ref|YP_001132558.1| recombination protein RecR [Mycobacterium gilvum PYR-GCK]
gi|315446385|ref|YP_004079264.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1]
gi|145214366|gb|ABP43770.1| DNA replication and repair protein RecR [Mycobacterium gilvum
PYR-GCK]
gi|315264688|gb|ADU01430.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1]
Length = 203
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L + + + V CS+CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRVRDGVTFCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDAS+I VVE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSDEERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLSVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|49082740|gb|AAT50770.1| PA1534 [synthetic construct]
Length = 199
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+
Sbjct: 122 GIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRRPI 197
>gi|154492908|ref|ZP_02032534.1| hypothetical protein PARMER_02547 [Parabacteroides merdae ATCC
43184]
gi|154087213|gb|EDN86258.1| hypothetical protein PARMER_02547 [Parabacteroides merdae ATCC
43184]
Length = 207
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K +EN + L+ +PG G ++A R LH++++ A A+ + V C
Sbjct: 1 MNQKYPSVLLENAVNELSSLPGVGRKTALRLALHMLRRDVGYTEGFASALLALRRDVKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ D CAIC+D QRD S + VVE++ ++ A+E + +YHVLGG +SP+D I
Sbjct: 61 KVCHNICDDDVCAICVDCQRDHSTVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL++R+ +++E++ A+S T+EG TT +I KL DVKI+ +A G+ +G
Sbjct: 121 GPGDLQIDSLVQRVAGGEVKEVVLALSTTMEGDTTNFFIYRKLSSYDVKISVIARGVSIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSIVNRTSF 201
>gi|262165294|ref|ZP_06033031.1| recombination protein RecR [Vibrio mimicus VM223]
gi|262025010|gb|EEY43678.1| recombination protein RecR [Vibrio mimicus VM223]
Length = 190
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQDVCH 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ +L
Sbjct: 61 ICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLDY 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLLGRHKL 189
>gi|71278497|ref|YP_270358.1| recombination protein RecR [Colwellia psychrerythraea 34H]
gi|123631494|sp|Q47XW2|RECR_COLP3 RecName: Full=Recombination protein recR
gi|71144237|gb|AAZ24710.1| recombination protein RecR [Colwellia psychrerythraea 34H]
Length = 201
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI L +PG G +SA+R L+++ + LA +A + C C N
Sbjct: 3 FSPLVQELIDSLKCLPGVGAKSAQRMAFQLLERNRRGGSKLANTLAKAMTDIGHCQQCRN 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R ++ + +VE D+ A+E++ Y VL G LSP+D IGP+D
Sbjct: 63 FTEEALCEICQSPKRQLSTTLCIVETPGDVIAIEQTGEFFGKYFVLMGHLSPIDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ++ + E+I A + T+EG+ TAH+I + + V I+R+A+G+P+G EL+
Sbjct: 123 LGLDILAKQFATGQFSEVILATNPTVEGEATAHFIAELAQQHQVNISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D T+ A+ R
Sbjct: 183 YVDGNTLSHALSGRKS 198
>gi|157413568|ref|YP_001484434.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9215]
gi|172047295|sp|A8G5G7|RECR_PROM2 RecName: Full=Recombination protein recR
gi|157388143|gb|ABV50848.1| RecR protein [Prochlorococcus marinus str. MIT 9215]
Length = 201
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + +EA+ ++ V C C N
Sbjct: 6 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSEALLEAHSNVGRCKKCFN 65
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + D C IC + QR+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE +
Sbjct: 66 LTSEDECEICKNTQRNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 125
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 126 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 184
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 185 VDEVTLARALEGRTNL 200
>gi|152983854|ref|YP_001349153.1| recombination protein RecR [Pseudomonas aeruginosa PA7]
gi|166221954|sp|A6V7W8|RECR_PSEA7 RecName: Full=Recombination protein recR
gi|150959012|gb|ABR81037.1| recombination protein RecR [Pseudomonas aeruginosa PA7]
Length = 198
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L RI E+I A + T+EG+ TAHYI L + ++R+A+G+P+G EL+
Sbjct: 122 GIPELDARIRDGAFSEVILATNPTVEGEATAHYIAQLLADRGLTLSRIAHGVPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRRPI 197
>gi|121997039|ref|YP_001001826.1| recombination protein RecR [Halorhodospira halophila SL1]
gi|171769498|sp|A1WTL2|RECR_HALHL RecName: Full=Recombination protein recR
gi|121588444|gb|ABM61024.1| recombination protein RecR [Halorhodospira halophila SL1]
Length = 201
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 117/195 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + L++ L R+PG G ++A+R LHL+++ LA+A+ + V C CG
Sbjct: 3 VYSPRLRELVEGLRRLPGVGAKTAQRMALHLLQRDRDGARQLADALQRAVDGVGHCPECG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C +C QR +++ VVE AD++ALE++ LY VLGG+LSPLD IGPE+
Sbjct: 63 LLTEEERCGLCASPQRRRTLLCVVESSADVFALEQATDFQGLYFVLGGALSPLDGIGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+E ++ E+I A + TIEG+ TAHY+ V+ TR+A+G+PMG L+
Sbjct: 123 LGLDRLQQRLEAGEVEEIILATNPTIEGEATAHYVQSLAAERGVRTTRIAHGVPMGGALE 182
Query: 185 YLDDGTIFEAIRSRT 199
+D GT+ A R
Sbjct: 183 QVDQGTLSHAFMGRR 197
>gi|329908504|ref|ZP_08274878.1| Recombination protein RecR [Oxalobacteraceae bacterium IMCC9480]
gi|327546695|gb|EGF31647.1| Recombination protein RecR [Oxalobacteraceae bacterium IMCC9480]
Length = 198
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 109/195 (55%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E L + L R+PG GP+SA+R HL++ L A+ ++V CS C
Sbjct: 3 TPSSLEFLTETLRRLPGVGPKSAQRIAYHLMQHDRDGAEQLGRALLQAVDRVQHCSRCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C C+D +RDA+++ VVE D +E++ Y VL G LSPLD IGP+DI
Sbjct: 63 FTEHLVCETCLDPERDATLLCVVETPGDQLMIEQTLTYKGFYFVLMGRLSPLDGIGPKDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LI R + E++ A + T EG+ TAHYI + +K + ++RLA G+P+G EL+Y
Sbjct: 123 HLDKLILRASDGIVAEVVLATNFTNEGEATAHYISETMKARGLSVSRLARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GTI A+ R
Sbjct: 183 VDAGTIARAMLDRRT 197
>gi|227536698|ref|ZP_03966747.1| recombination protein RecR [Sphingobacterium spiritivorum ATCC
33300]
gi|227243499|gb|EEI93514.1| recombination protein RecR [Sphingobacterium spiritivorum ATCC
33300]
Length = 204
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 118/197 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K ++ + R+PG G ++A R LHL+K+ + + A+ + ++ C C
Sbjct: 2 EFSSKLLQQAVDEFGRLPGIGQKTALRLVLHLLKQSDGEVLRFTGALNQLKEQIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C C +RD S+I VVED D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 FNISDHDICETCSSLKRDKSLICVVEDTRDVMAIENTNQYQGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L++R+ ++E+I A+SAT+EG TT Y+ KLK D++I+ +A GI G EL
Sbjct: 122 DLKIEGLVQRLRAGHVKEVILALSATMEGDTTIFYLYRKLKEFDIQISTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEITLGRSIATRVP 198
>gi|123966421|ref|YP_001011502.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9515]
gi|171769727|sp|A2BX84|RECR_PROM5 RecName: Full=Recombination protein recR
gi|123200787|gb|ABM72395.1| RecR protein [Prochlorococcus marinus str. MIT 9515]
Length = 199
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N
Sbjct: 4 FTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQSESSIRDFSKALLEAHSNVGHCKKCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + + C IC + +R+ ++I VV + DL ALER++ +YHV+GG +SP+D IGPE +
Sbjct: 64 LTSEEECDICRNAERNQNIICVVAETKDLLALERAREFKGVYHVIGGLISPMDSIGPEIL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLTPF-TKVTRIAYGLPMGSELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 VDEVTLARALEGRTNL 198
>gi|15596731|ref|NP_250225.1| recombination protein RecR [Pseudomonas aeruginosa PAO1]
gi|107100965|ref|ZP_01364883.1| hypothetical protein PaerPA_01001995 [Pseudomonas aeruginosa PACS2]
gi|218892510|ref|YP_002441377.1| recombination protein RecR [Pseudomonas aeruginosa LESB58]
gi|254234636|ref|ZP_04927959.1| recombination protein RecR [Pseudomonas aeruginosa C3719]
gi|254239882|ref|ZP_04933204.1| recombination protein RecR [Pseudomonas aeruginosa 2192]
gi|313106539|ref|ZP_07792767.1| recombination protein RecR [Pseudomonas aeruginosa 39016]
gi|20139743|sp|Q9I3H9|RECR_PSEAE RecName: Full=Recombination protein recR
gi|226739007|sp|B7UVI8|RECR_PSEA8 RecName: Full=Recombination protein recR
gi|9947493|gb|AAG04923.1|AE004582_1 recombination protein RecR [Pseudomonas aeruginosa PAO1]
gi|126166567|gb|EAZ52078.1| recombination protein RecR [Pseudomonas aeruginosa C3719]
gi|126193260|gb|EAZ57323.1| recombination protein RecR [Pseudomonas aeruginosa 2192]
gi|218772736|emb|CAW28521.1| recombination protein RecR [Pseudomonas aeruginosa LESB58]
gi|310879269|gb|EFQ37863.1| recombination protein RecR [Pseudomonas aeruginosa 39016]
Length = 198
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+
Sbjct: 122 GIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRRPI 197
>gi|257458483|ref|ZP_05623620.1| recombination protein RecR [Treponema vincentii ATCC 35580]
gi|257444080|gb|EEV19186.1| recombination protein RecR [Treponema vincentii ATCC 35580]
Length = 196
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 115/195 (58%), Gaps = 1/195 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+E+LI L R+PG G +S R H++K++ LA+++ N+++ + C ICG
Sbjct: 2 NALEDLIDNLCRLPGIGKKSGARLAYHILKQEPLYAHRLADSLYNLHDSIKPCPICGAFT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D RD S I VVE D++ L L+HVLGG ++PL+ IGPE + I
Sbjct: 62 DQDVCTICSDPGRDGSCICVVEQPQDVYTLMSMGEYRGLFHVLGGVIAPLEGIGPEQLRI 121
Query: 128 QSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
SL++RI ++E+I A + TIEG TTA YI L+ V++TRLA G+P+G +L+Y
Sbjct: 122 ASLVKRIGSGTAVKEVILATNPTIEGDTTALYIQKILRDFPVEVTRLASGLPVGGDLEYT 181
Query: 187 DDGTIFEAIRSRTVL 201
D T+ + + R +
Sbjct: 182 DKLTLMRSFKGRIKI 196
>gi|114562713|ref|YP_750226.1| recombination protein RecR [Shewanella frigidimarina NCIMB 400]
gi|122300117|sp|Q084C7|RECR_SHEFN RecName: Full=Recombination protein recR
gi|114334006|gb|ABI71388.1| recombination protein RecR [Shewanella frigidimarina NCIMB 400]
Length = 199
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L++++ ++ LA+++ ++V C C
Sbjct: 3 FSPLVDELIQSLRALPGVGPKSAQRMAFQLLERERKVGLKLADSLQKAMSEVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC +R + +I VVE AD+ A+E N Y VL G LSPLD +GPE+
Sbjct: 63 FTEQDLCPICSSHRRINTGIICVVETPADVLAIEAGGHFNGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + ++ ELI A + T+EG TAH+I D + +V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLTSNEVSELILATNPTVEGDATAHFIADMARRHNVVISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRIPL 199
>gi|148997723|ref|ZP_01825287.1| recombination protein RecR [Streptococcus pneumoniae SP11-BS70]
gi|147756222|gb|EDK63264.1| recombination protein RecR [Streptococcus pneumoniae SP11-BS70]
Length = 198
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYPGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|187923818|ref|YP_001895460.1| recombination protein RecR [Burkholderia phytofirmans PsJN]
gi|229890135|sp|B2T3S5|RECR_BURPP RecName: Full=Recombination protein recR
gi|187715012|gb|ACD16236.1| recombination protein RecR [Burkholderia phytofirmans PsJN]
Length = 198
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 107/195 (54%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ L +PG GP+SA+R HL++ L ++ + C C
Sbjct: 4 PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKCNTF 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 64 TEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
L+ R I+E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+
Sbjct: 124 FDRLVRRASDGVIKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GTI A+ R +
Sbjct: 184 DAGTIARAMLDRRSM 198
>gi|327483767|gb|AEA78174.1| Recombination protein RecR [Vibrio cholerae LMA3894-4]
Length = 190
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRTFTEQDVCH 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ +L
Sbjct: 61 ICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLDY 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLLGRHKL 189
>gi|23016070|ref|ZP_00055830.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Magnetospirillum magnetotacticum MS-1]
Length = 197
Score = 279 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 112/197 (56%), Positives = 144/197 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++L+R+PG GPRSARRA L LV+K+E LL PL +AMA KV CS+CG
Sbjct: 1 MVGPEIERLIQLLSRLPGLGPRSARRAALRLVEKRESLLIPLGQAMAEAAAKVRTCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DT DPCAIC D +RD S++ VVEDVA LWA+ER+ + Y VLGG LS LD IGPED
Sbjct: 61 NFDTIDPCAICADHRRDPSMLCVVEDVAGLWAMERTGSFKGRYAVLGGLLSALDGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI SL+ R + E+I A AT+EGQTTAHY+ ++L +V ++ LA+G+P+G ELD
Sbjct: 121 LGIDSLVARAADDTVTEVILATPATVEGQTTAHYLAERLAPCNVTVSGLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+LDDGTI A+R+R V
Sbjct: 181 HLDDGTITAALRARRVF 197
>gi|163755946|ref|ZP_02163063.1| recombination protein recR [Kordia algicida OT-1]
gi|161324117|gb|EDP95449.1| recombination protein recR [Kordia algicida OT-1]
Length = 206
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+++ E L A+ ++ ++ C C
Sbjct: 2 EFSSKLLENAVNEISQLPGIGKRTALRLVLHLLRQPESQTLHLTNALQDLRTEIKHCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + R +I VVED+ D+ A+E + LYHVLGG +SPLD IGP
Sbjct: 62 HNISDVEICDICRNVNRQQEIICVVEDIRDVMAIESTAQYKGLYHVLGGKISPLDGIGPH 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+E+++ K++E+IFA+S+T+EG TT YI +++ DVK + +A GI +G EL
Sbjct: 122 NLTINSLVEKVKAGKVKEIIFALSSTMEGDTTNFYIYKQIEKYDVKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSILNRVPF 199
>gi|301794653|emb|CBW37104.1| recombination protein RecR [Streptococcus pneumoniae INV104]
Length = 198
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVATMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|116049478|ref|YP_791719.1| recombination protein RecR [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390098|ref|ZP_06879573.1| recombination protein RecR [Pseudomonas aeruginosa PAb1]
gi|122258586|sp|Q02K17|RECR_PSEAB RecName: Full=Recombination protein recR
gi|115584699|gb|ABJ10714.1| recombination protein RecR [Pseudomonas aeruginosa UCBPP-PA14]
Length = 198
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI+ L +PG G +SA+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+
Sbjct: 122 GIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRRPI 197
>gi|93005630|ref|YP_580067.1| recombination protein RecR [Psychrobacter cryohalolentis K5]
gi|122415701|sp|Q1QCM0|RECR_PSYCK RecName: Full=Recombination protein recR
gi|92393308|gb|ABE74583.1| DNA replication and repair protein RecR [Psychrobacter
cryohalolentis K5]
Length = 197
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + L+K L +PG G +SA+R LHL+ KK LA+A+ + C C
Sbjct: 1 MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C +C D +RD +++ VVE AD+ A+E++ Y VLGG LSP+D I +D
Sbjct: 61 SFSDEAVCPLCQDPRRDDTLLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R++ + + ELI A T+EGQTTAH+I + + K+TRLA G+PMG EL+
Sbjct: 121 LNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVSRHVNKVTRLAQGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD T+ +A+++R+ L
Sbjct: 181 YLDSMTLGQAMQNRSFL 197
>gi|291288273|ref|YP_003505089.1| recombination protein RecR [Denitrovibrio acetiphilus DSM 12809]
gi|290885433|gb|ADD69133.1| recombination protein RecR [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + E + L+R+PG G ++A R LH++K + + LAE++ + K C ICG
Sbjct: 1 MKNRIFERCVGELSRLPGIGRKTAARLALHILKADSEQVKSLAESLVELKEKTVFCKICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T+ C IC D R+ S I VVE+ D++ LE + LYHVLGG +SPLD IGPED
Sbjct: 61 NMSETEVCHICTDGYRNRSQICVVEEAKDIYVLEATGFFRGLYHVLGGRISPLDGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R + + + E+I A + IEG+TTA Y+ LK ++K+T++A G+P+G+ L+
Sbjct: 121 LHIEELLKRAKAEDVSEIILATNPDIEGETTAIYLSKLLKKQNLKVTKIASGVPIGTNLE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A+ R
Sbjct: 181 YTDEITLLKAMEQRKDF 197
>gi|332526816|ref|ZP_08402917.1| recombination protein RecR [Rubrivivax benzoatilyticus JA2]
gi|332111218|gb|EGJ11250.1| recombination protein RecR [Rubrivivax benzoatilyticus JA2]
Length = 195
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 110/195 (56%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI+ L R+PG G +SA+R HL++ LA A+ +V C+ C
Sbjct: 1 MADTALDALIEALRRLPGVGQKSAQRVAFHLLQHDRDGARRLAHALDVAAERVHHCARCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C +C D +RD ++ VVE AD ALERS LY VL G LSPLD +G D
Sbjct: 61 TFTEDEVCPVCRDPERDGRLLCVVETPADQHALERSGGYRGLYFVLMGRLSPLDGVGAGD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG LIER ++E+I A S T EG+ TAH + L+ +K+TRLA G+P GSE++
Sbjct: 121 IGAAELIERASDGTVQEVILATSFTAEGEVTAHALAQALRARGLKVTRLARGVPAGSEIE 180
Query: 185 YLDDGTIFEAIRSRT 199
Y+D GTI A+ R
Sbjct: 181 YVDLGTIAHALVDRR 195
>gi|300113233|ref|YP_003759808.1| recombination protein RecR [Nitrosococcus watsonii C-113]
gi|299539170|gb|ADJ27487.1| recombination protein RecR [Nitrosococcus watsonii C-113]
Length = 199
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G + LI+ L +PG GP+SA+R +L++ + LA+A+ +K+ C C
Sbjct: 3 LFGLSLGRLIEALCCLPGVGPKSAQRMAFYLLESNREGGQRLAQALLEALDKMTHCQTCR 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ TD C++C D +RD + VVE +D+ A+E++ Y VL G LSPLD +GPE
Sbjct: 63 ILSETDLCSLCADSRRDHGQLCVVEMPSDVQAIEQATNYAGRYFVLMGHLSPLDGVGPEA 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R++ +IRE+I A + T+EG+ TA+YI + + + TR+A+G+P+G EL+
Sbjct: 123 LGMDLLAKRLDTDQIREVILATNLTVEGEATAYYISELAQTRGITTTRIAHGVPLGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
++D T+ A +SR L
Sbjct: 183 FIDSNTLSHAFQSRQHL 199
>gi|33861653|ref|NP_893214.1| RecR protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|73621508|sp|Q7V0Z7|RECR_PROMP RecName: Full=Recombination protein recR
gi|33634230|emb|CAE19556.1| RecR protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 199
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N
Sbjct: 4 FTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESSIRDFSKALLEAHSNVGHCKKCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + + C IC + +R+ +I VV + DL ALERS+ YHV+GG +SP+D I PE +
Sbjct: 64 LTSEEECEICRNTERNQKIICVVAETKDLLALERSREFKGTYHVIGGLISPMDSISPELL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL+ER+ I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y
Sbjct: 124 EIRSLVERVSKSDIDEIILALTPSVEGDTTSLYIGKLLTPF-TKVTRIAYGLPMGSELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ RT L
Sbjct: 183 VDEVTLARALEGRTNL 198
>gi|300087578|ref|YP_003758100.1| recombination protein RecR [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527311|gb|ADJ25779.1| recombination protein RecR [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 203
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 116/198 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K T + L ++L R+PG GP+SA+R + H++K + + LA+A+ + + LC C
Sbjct: 6 KSTAAAVNRLTEVLGRLPGIGPKSAQRLSYHILKASAEQVRELADALVCVKQQTRLCRTC 65
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C+IC +RD S I VVE D+ LE + YHVL G++SP + +G
Sbjct: 66 WNIADGDTCSICASPERDTSRICVVEQPQDMLTLEHTGIYKGGYHVLHGAISPSEGVGTA 125
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI + L+ R+E + E+I A +A +EG+TTA Y+ + + +++TRLA G+P G E+
Sbjct: 126 DIRLAELMSRLESGMVTEVIVATNANVEGETTAMYLQRLIAPLGIRVTRLARGLPFGGEI 185
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y DD T+ A+ +R
Sbjct: 186 EYADDVTLSRALENRQEF 203
>gi|325285404|ref|YP_004261194.1| Recombination protein recR [Cellulophaga lytica DSM 7489]
gi|324320858|gb|ADY28323.1| Recombination protein recR [Cellulophaga lytica DSM 7489]
Length = 206
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 125/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++++PG G R+A R LHL+K+ + L+ ++ + ++ CS C
Sbjct: 2 DFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPKDQTSALSNSLLKLREEIKFCSNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + +RD S++ VVED+ D+ A+E + LYHVLGG +SP++ +GP+
Sbjct: 62 HNISDVVLCEICANPKRDESIVCVVEDIRDVMAIENTGQYRGLYHVLGGRISPMEGVGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+ + + I+ELIFA+S+T+EG TT YI +++G+ +K + +A GI +G EL
Sbjct: 122 NLTIDSLVNKSKEGIIKELIFALSSTMEGDTTNFYIYKQIEGMGLKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSILNRVPF 199
>gi|168488614|ref|ZP_02712813.1| recombination protein RecR [Streptococcus pneumoniae SP195]
gi|221232409|ref|YP_002511562.1| recombination protein RecR [Streptococcus pneumoniae ATCC 700669]
gi|225855102|ref|YP_002736614.1| recombination protein RecR [Streptococcus pneumoniae JJA]
gi|225859427|ref|YP_002740937.1| recombination protein RecR [Streptococcus pneumoniae 70585]
gi|254790785|sp|C1C8R1|RECR_STRP7 RecName: Full=Recombination protein recR
gi|254790786|sp|B8ZM67|RECR_STRPJ RecName: Full=Recombination protein recR
gi|254790788|sp|C1CFP3|RECR_STRZJ RecName: Full=Recombination protein recR
gi|6634558|emb|CAB64458.1| recombination protein [Streptococcus pneumoniae]
gi|6634563|emb|CAB64462.1| recombination protein [Streptococcus pneumoniae]
gi|6634568|emb|CAB64466.1| recombination protein [Streptococcus pneumoniae]
gi|183572659|gb|EDT93187.1| recombination protein RecR [Streptococcus pneumoniae SP195]
gi|220674870|emb|CAR69445.1| recombination protein RecR [Streptococcus pneumoniae ATCC 700669]
gi|225720091|gb|ACO15945.1| recombination protein RecR [Streptococcus pneumoniae 70585]
gi|225722656|gb|ACO18509.1| recombination protein RecR [Streptococcus pneumoniae JJA]
gi|332072501|gb|EGI82984.1| recombination protein RecR [Streptococcus pneumoniae GA17570]
gi|332199701|gb|EGJ13776.1| recombination protein RecR [Streptococcus pneumoniae GA41317]
Length = 198
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDSTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|238754275|ref|ZP_04615632.1| hypothetical protein yruck0001_22240 [Yersinia ruckeri ATCC 29473]
gi|238707522|gb|EEP99882.1| hypothetical protein yruck0001_22240 [Yersinia ruckeri ATCC 29473]
Length = 191
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C D C
Sbjct: 1 MESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQDSCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+ L +
Sbjct: 61 ICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLDRLEQ 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + + E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLSSETLSEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R
Sbjct: 181 HSLAGRHPF 189
>gi|260221003|emb|CBA29133.1| Recombination protein recR [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 196
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 111/192 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L +PG G +SA+R HL++ L+ A+ + V C C
Sbjct: 5 NALDTLIQALRGLPGVGVKSAQRMAFHLLQHDRPAAQFLSRALQQAADTVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+ C+D++RD S + VVE AD A+ER+ A LY VL G LSPLD +GP D+G
Sbjct: 65 QDAVCSTCLDERRDRSQLCVVETPADQSAMERTGAYKGLYFVLMGKLSPLDGVGPNDLGF 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L +R ++E+I A + T EG+ TA+ I + LK ++ TRLA G+P+GSEL+Y+D
Sbjct: 125 KKLFDRACDGVVQEVILATNFTAEGEATAYVIAEGLKARGLRPTRLARGVPVGSELEYVD 184
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 185 LGTIAHALVDRR 196
>gi|117620825|ref|YP_857005.1| recombination protein RecR [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|166221919|sp|A0KL54|RECR_AERHH RecName: Full=Recombination protein recR
gi|117562232|gb|ABK39180.1| recombination protein RecR [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 200
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ ++K L +PG GP+SA+R L++++ LA+ ++ ++ CS C
Sbjct: 3 FSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLSRALTEIGHCSHCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC + +R+ ++ VVE AD+ A+E++ + Y VL G LSPLD IGPE+
Sbjct: 63 FTENERCEICANPKREENGLLCVVESPADVAAIEQTGQFSGRYFVLMGHLSPLDGIGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G++ L R++ + I ELI A + TIEG TA YI D + VK++R+A+G+P+G EL+
Sbjct: 123 LGLEILERRLKDEAISELILATNPTIEGDATAWYIADMARAAGVKVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLMGRQPL 199
>gi|312116064|ref|YP_004013660.1| recombination protein RecR [Rhodomicrobium vannielii ATCC 17100]
gi|311221193|gb|ADP72561.1| recombination protein RecR [Rhodomicrobium vannielii ATCC 17100]
Length = 204
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 115/200 (57%), Positives = 151/200 (75%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
QKK +G EIE LI +LA++PG GPRSARRA LHL+KK+EQLL PLA A+ +K+ +C
Sbjct: 5 QKKSSGAEIEELIALLAKLPGLGPRSARRAALHLIKKREQLLLPLARALGVAADKIAICK 64
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
CGN+DT PCAIC D RDAS I VVE+V DLWALER+ V + YHVLGG+LSPLD G
Sbjct: 65 ECGNIDTQQPCAICADASRDASTICVVEEVGDLWALERAAIVRSRYHVLGGTLSPLDGRG 124
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P+D+ + L+ER + E+I A++AT+EGQ+TAHYI +L+G+ +K+TRLA G+P+G
Sbjct: 125 PDDLFLVKLMERARQPGVNEIILALNATVEGQSTAHYIAAELEGLPLKVTRLARGVPIGG 184
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AI+ R +
Sbjct: 185 ELDYLDEGTLAAAIKLRQPI 204
>gi|124267718|ref|YP_001021722.1| recombination protein RecR [Methylibium petroleiphilum PM1]
gi|171769839|sp|A2SIU8|RECR_METPP RecName: Full=Recombination protein recR
gi|124260493|gb|ABM95487.1| DNA replication and repair protein RecR [Methylibium petroleiphilum
PM1]
Length = 196
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 110/194 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E+L + L R+PG G +SA+R HL++ + LA A+ V C C
Sbjct: 3 ASSTLESLTEALRRLPGVGVKSAQRMAYHLLQHDREGALRLARALEQAVATVRHCERCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C+ C+D R+ + VVE AD A+ERS + + LY VL G LSPLD IG DI
Sbjct: 63 FTEAPVCSTCLDPARERRQLCVVETPADQAAVERSGSYHGLYFVLMGRLSPLDGIGVHDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G++ L+ R +++ELI A + T EG+ TAH I LKG +TRLA G+P+GSEL+Y
Sbjct: 123 GLEKLLARATDGEVQELIVATNFTAEGEATAHVIAQALKGRGPSVTRLARGVPVGSELEY 182
Query: 186 LDDGTIFEAIRSRT 199
+D GTI A+ R
Sbjct: 183 VDLGTIAHALSDRR 196
>gi|120406470|ref|YP_956299.1| recombination protein RecR [Mycobacterium vanbaalenii PYR-1]
gi|171769172|sp|A1TGJ3|RECR_MYCVP RecName: Full=Recombination protein recR
gi|119959288|gb|ABM16293.1| DNA replication and repair protein RecR [Mycobacterium vanbaalenii
PYR-1]
Length = 203
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L + + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNKVRDGVTFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDAS+I VVE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSDEERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ RI + ++ E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLNRIGERVDGVEVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R +
Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202
>gi|224825857|ref|ZP_03698961.1| recombination protein RecR [Lutiella nitroferrum 2002]
gi|224602081|gb|EEG08260.1| recombination protein RecR [Lutiella nitroferrum 2002]
Length = 199
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 110/196 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI L +PG GP+SA+R HL+++ + LA A+ + C C
Sbjct: 3 NPPSLDQLISALKVLPGVGPKSAQRMAFHLLQRDQAGADRLARALDRALANLTHCERCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T C +C + R+ + +VE ADL LE+++ + LY VL G LSP+D IGP+D+
Sbjct: 63 FSETPLCNLCAEPARNQHQLCIVEMPADLLMLEQARCYDGLYFVLMGRLSPIDGIGPKDV 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R + E+I A + T EG+ TAH I + LK + ++R+A G+P+G EL+Y
Sbjct: 123 NLDKLMVRALDGVVEEVIIATNFTAEGEVTAHMIAELLKDRGLAVSRIARGMPVGGELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ +A+ R L
Sbjct: 183 VDSGTLAQALYERRQL 198
>gi|261367394|ref|ZP_05980277.1| recombination protein RecR [Subdoligranulum variabile DSM 15176]
gi|282570160|gb|EFB75695.1| recombination protein RecR [Subdoligranulum variabile DSM 15176]
Length = 198
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 3/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + + +ENL+ AR PG G + A R ++ + LA A+ + + C
Sbjct: 1 MPQNV--EPLENLVDQFARFPGIGRKGATRMAYEVMSMSNEQAMELARAIEHAKKDLHRC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
IC + + C IC +RD SVI VVE D+ ++ER+ N LYHVL G +SP+D I
Sbjct: 59 RICQDYTAGEVCKICSSPKRDRSVICVVESPRDIKSIERTHEYNGLYHVLHGLISPMDGI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
G + + ++ L+ R+ + ++E+I A S T+EG+ TA Y+ +K + ++ TRLAYG+P+G
Sbjct: 119 GADQLCVKELLARL-NETVKEVIMATSPTVEGEATAMYLAKLIKPLGIRTTRLAYGLPVG 177
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S L+Y D+ T++ A++ R L
Sbjct: 178 SSLEYADETTLYRAMQGRGEL 198
>gi|157961351|ref|YP_001501385.1| recombination protein RecR [Shewanella pealeana ATCC 700345]
gi|189029375|sp|A8H2R3|RECR_SHEPA RecName: Full=Recombination protein recR
gi|157846351|gb|ABV86850.1| recombination protein RecR [Shewanella pealeana ATCC 700345]
Length = 199
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA+++A ++V C C
Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC+ +R S VI VVE AD+ A+E + Y VL G LSPLD +GP++
Sbjct: 63 FTEETYCPICVSTKRGHSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + + ELI A + T+EG TAHYI D K + ++R+A+G+P+G EL+
Sbjct: 123 LGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADMAKRHQLTVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R +
Sbjct: 183 YVDSTTLALSFNGRLPM 199
>gi|332666194|ref|YP_004448982.1| Recombination protein recR [Haliscomenobacter hydrossis DSM 1100]
gi|332335008|gb|AEE52109.1| Recombination protein recR [Haliscomenobacter hydrossis DSM 1100]
Length = 203
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 120/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E+ + A +PG G ++A R LHLV ++ + +A+ + ++ C +C
Sbjct: 2 NFSSKLLEDAVNAFASLPGIGKKTALRLVLHLVNREVDTVDQFGDAIVKMRREIKSCKVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC D +RD V+ VVE++ D+ A+E + LYHVLGG +SPL+ +GP
Sbjct: 62 HNLSDEELCMICRDARRDHQVVCVVENIRDVMAIEDTGQYRGLYHVLGGVISPLEGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL++RI +++E++ AIS TIEG+TT YI +LK + V I+ +A G+ G EL
Sbjct: 122 ELTIDSLVQRITNNEVKEIVMAISPTIEGETTIFYISKRLKDLHVNISTIARGVSFGGEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ T+ +I +R
Sbjct: 182 EYADELTLGRSIVAR 196
>gi|330445439|ref|ZP_08309091.1| recombination protein RecR [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489630|dbj|GAA03588.1| recombination protein RecR [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 189
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ Q LA+A++ ++ C C D CA
Sbjct: 1 MEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLADALSQAMTEIGHCRDCRTFTEDDVCA 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + +I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ L E
Sbjct: 61 ICDNPRRQENGLICVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDRLEE 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + I ELI A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQQETISELILATNPTVEGEATAHYIAELCREYGVPASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLAGRQRL 189
>gi|206890014|ref|YP_002248896.1| recombination protein RecR [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741952|gb|ACI21009.1| recombination protein RecR [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 197
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ENLI+ L ++PG G ++A+R ++ E +AEA+ N+ K CS+C N+
Sbjct: 2 SNPLENLIENLCKLPGIGRKTAQRLAFFIMNMPENEALEIAEAIINLKKKAKFCSVCFNI 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC + RD S+I VVE+ +++ E++ +YHVLGG++SP+D + P+ +
Sbjct: 62 TENEKCNICSNSIRDHSIICVVEEPSNIILFEKTG-YKGVYHVLGGNISPVDGLTPDKLK 120
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L ER++ +IRE+I + S +G+ TA +I D LK +VKI+R+AYG+P+G ++++
Sbjct: 121 IKELEERVKTGQIREVIISTSPNTKGELTAQWIADLLKKYNVKISRIAYGLPIGIDIEFA 180
Query: 187 DDGTIFEAIRSRTV 200
D+ T+ +A+ R
Sbjct: 181 DEVTLSKALEGRKP 194
>gi|317506737|ref|ZP_07964519.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974]
gi|316254956|gb|EFV14244.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974]
Length = 203
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R HLV + + L A+A I + V C ICG
Sbjct: 1 MFEGPVQDLIDELSRLPGVGPKSAQRIAFHLVGSPKPEIDRLGSALAKIRDGVQFCDICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D +RD S I VV D+ A+ER++ + YHVLGG+L+PL +GP+
Sbjct: 61 NIAADEICRICKDPRRDLSRICVVSQPKDVVAIERTREFHGRYHVLGGALNPLAGVGPDR 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ ++ L+ R+ + E+I A EG+ TA Y+ L D+++TRLA G+PM
Sbjct: 121 LRVKELLTRLASAVDGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADEMTLGRALAGRRSL 202
>gi|229890155|sp|A4G3Z0|RECR_HERAR RecName: Full=Recombination protein recR
gi|193222271|emb|CAL61227.2| Recombination protein RecR [Herminiimonas arsenicoxydans]
Length = 198
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 114/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L + L R+PG GP+SA+R HL++ L A++ +V C++C
Sbjct: 3 SPSSLAFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C+D +R+A+++ VVE D +E++ LY VL G LSPLD IGP+DI
Sbjct: 63 FTESAVCETCLDAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ LI R ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y
Sbjct: 123 HLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D GTI A+ R
Sbjct: 183 VDAGTIARAMLDRRT 197
>gi|253698847|ref|YP_003020036.1| recombination protein RecR [Geobacter sp. M21]
gi|259563697|sp|C6E8Y9|RECR_GEOSM RecName: Full=Recombination protein recR
gi|251773697|gb|ACT16278.1| recombination protein RecR [Geobacter sp. M21]
Length = 197
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 125/196 (63%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L+ L ++PG G +SA R HL+K + LA+++ + +V LCS+C
Sbjct: 4 FSGSLTRLVGELKKLPGVGEKSALRLAFHLLKHPNN-IEALAQSLLQVGERVHLCSVCFA 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RD+ I VVE+ DL ALERS+A YHVL G+LSPL+ + P+D+
Sbjct: 63 ITEDDPCWICSGE-RDSGTICVVEEPQDLMALERSRAFGGRYHVLQGALSPLNGVTPKDL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ ++RE++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y
Sbjct: 122 RIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRMIKPLSIKVTRLAHGIPVGSDLEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 VDAATVQRAVEGRSEL 197
>gi|330899494|gb|EGH30913.1| recombination protein RecR [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 200
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA+A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ER+ + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|88812991|ref|ZP_01128234.1| recombination protein RecR [Nitrococcus mobilis Nb-231]
gi|88789769|gb|EAR20893.1| recombination protein RecR [Nitrococcus mobilis Nb-231]
Length = 200
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 114/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ L +PG GP+SA+R H++++ + LA +A KV C C
Sbjct: 4 FSPLVSELIEALRCLPGVGPKSAQRMAFHILQRDREGGMRLARVLAEAVAKVGECRYCRI 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC +RD S + +VE+ AD++AL+++ + LY VL G LSPLD IGP ++
Sbjct: 64 LTEQALCTICSSGKRDRSTLCIVENPADVYALDQATDYSGLYFVLKGRLSPLDGIGPAEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +R +IRE++ A ++T+EG+ TA +I + + ++R+AYG+P+G EL+Y
Sbjct: 124 GLDCLEKRFCEGEIREIVLATNSTVEGEATAQFIAEMAYNNAIHVSRIAYGVPVGGELEY 183
Query: 186 LDDGTIFEAIRSRTV 200
+D GT+ A R
Sbjct: 184 VDSGTLSHAFAGRRE 198
>gi|149927018|ref|ZP_01915276.1| recombination protein RecR [Limnobacter sp. MED105]
gi|149824239|gb|EDM83459.1| recombination protein RecR [Limnobacter sp. MED105]
Length = 211
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 117/193 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ +L++ L R+PG GP+SA+R HL++ Q L E++ ++ CS+C N
Sbjct: 14 PLVDLVQALKRLPGVGPKSAQRLAFHLLQNDRQAATALGESLLKAVAEIRHCSMCNNFCH 73
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C+IC D +R+ ++ VVE ADL A+E ++ Y+VL G SPLD + PE +
Sbjct: 74 ADVCSICSDTRRNPGLLCVVETPADLAAIEATQTYRGYYYVLMGRASPLDGVRPESLDWP 133
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ +++E+I A + T EG+ TA ++ D+++ + +K++RLA G+P+G EL+Y D
Sbjct: 134 KLSQRLDDSEVKEVILATNFTNEGEATAVFLTDRIRRMALKVSRLARGVPIGGELEYTDP 193
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R L
Sbjct: 194 STVARALLDRRQL 206
>gi|307565357|ref|ZP_07627850.1| recombination protein RecR [Prevotella amnii CRIS 21A-A]
gi|307346026|gb|EFN91370.1| recombination protein RecR [Prevotella amnii CRIS 21A-A]
Length = 202
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 125/199 (62%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ +E + ++ PG G ++A R LHL+++ + + A+ + + + C +
Sbjct: 2 QEFHSLLLEKAVNEFSQFPGIGRKTALRLVLHLLRQSTSRVDEFSNAITLMKHNIKSCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ TD C IC D RD S++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +GP
Sbjct: 62 CHNISDTDLCPICSDIHRDKSIVCVVENIQDVMAIENTQQFSGLYHVLGGIISPMDGVGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI I SL+ER+ I+E+IFA+++T+EG TT YI K+K ++K++ +A GI +G E
Sbjct: 122 NDIEIDSLVERVRSGSIKEVIFALASTMEGDTTNFYISRKIKNFNIKLSVIARGISVGDE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ T+ +I +RT
Sbjct: 182 LEYTDEVTLGRSIVNRTPF 200
>gi|295133092|ref|YP_003583768.1| recombination protein RecR [Zunongwangia profunda SM-A87]
gi|294981107|gb|ADF51572.1| recombination protein RecR [Zunongwangia profunda SM-A87]
Length = 205
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E + ++++PG G R+A R LHL+++ E L +A++ + ++ C C
Sbjct: 2 DFSSKLLEQAVDQMSQLPGIGKRTALRLVLHLLRQPETQTEQLTKALSKLRAEIKRCRNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC + R ++ +VEDV D+ A+E + +YHVLGG +SP+D IGP
Sbjct: 62 YNISDTELCDICANPSRQEDLVCIVEDVRDVMAIENTGQYRGMYHVLGGKISPMDGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ LIE++ KI+E+IFA+S+T+EG TT YI +L+G VK + +A GI +G EL
Sbjct: 122 QLTIKPLIEKVRDGKIQEIIFALSSTMEGDTTNFYIYKQLEGSGVKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSITNRIPF 199
>gi|237746946|ref|ZP_04577426.1| recombinational DNA repair protein [Oxalobacter formigenes HOxBLS]
gi|229378297|gb|EEO28388.1| recombinational DNA repair protein [Oxalobacter formigenes HOxBLS]
Length = 198
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 112/192 (58%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++NLI+ L +PG GP+SA+R H+++ L+ A+++ + C+ C
Sbjct: 6 SLQNLIQALRHLPGIGPKSAQRIAYHMLQHDRDGAAKLSLALSDAIANIRHCARCNTFSE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C +C D +RDAS++ V E AD +E++ Y VL GSLSPLD IGP++I
Sbjct: 66 EEICEMCRDNERDASLLCVTETPADQIMIEQTLTFKGYYFVLMGSLSPLDGIGPKEICFD 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI R ++E++ A S EG+ TAHYI + LK ++++RLA G+P+G+EL+Y+D
Sbjct: 126 KLIRRATDGVVQEVVLATSFNNEGEATAHYISEMLKARGLRVSRLARGVPVGAELEYVDI 185
Query: 189 GTIFEAIRSRTV 200
GTI A R
Sbjct: 186 GTIARAFLDRKT 197
>gi|66046625|ref|YP_236466.1| recombination protein RecR [Pseudomonas syringae pv. syringae
B728a]
gi|302188651|ref|ZP_07265324.1| recombination protein RecR [Pseudomonas syringae pv. syringae 642]
gi|75501355|sp|Q4ZQZ4|RECR_PSEU2 RecName: Full=Recombination protein recR
gi|63257332|gb|AAY38428.1| RecR protein [Pseudomonas syringae pv. syringae B728a]
gi|330972503|gb|EGH72569.1| recombination protein RecR [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 200
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA+A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|215448054|ref|ZP_03434806.1| recombination protein RecR [Mycobacterium tuberculosis T85]
gi|289759875|ref|ZP_06519253.1| recombination protein recR [Mycobacterium tuberculosis T85]
gi|294995375|ref|ZP_06801066.1| recombination protein RecR [Mycobacterium tuberculosis 210]
gi|289715439|gb|EFD79451.1| recombination protein recR [Mycobacterium tuberculosis T85]
gi|326905554|gb|EGE52487.1| recombination protein recR [Mycobacterium tuberculosis W-148]
Length = 203
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG
Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTCVLAKVRDGVRFCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179
+ I+ L+ ER++ + E+I A EG+ TA Y++ L+ + +TR+A G+PM
Sbjct: 121 LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R VL
Sbjct: 181 GGDLEFADELTLGRALAGRRVL 202
>gi|33863348|ref|NP_894908.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9313]
gi|73621507|sp|Q7V6R9|RECR_PROMM RecName: Full=Recombination protein recR
gi|33640797|emb|CAE21252.1| RecR protein [Prochlorococcus marinus str. MIT 9313]
Length = 189
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I R+PG GPR+A+R LHL+++ E + A+A+ ++V C C ++ C
Sbjct: 2 IDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLCD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC D +R ++ VV D DL ALER++ YHVLGG +SP+D IGP+ + I SLI+R
Sbjct: 62 ICRDGKRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D+ T+
Sbjct: 122 VDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYADEVTLTR 180
Query: 194 AIRSRTVL 201
A+ R +
Sbjct: 181 ALEGRRAM 188
>gi|83815474|ref|YP_446653.1| recombination protein RecR [Salinibacter ruber DSM 13855]
gi|294508588|ref|YP_003572647.1| Recombination protein recR [Salinibacter ruber M8]
gi|123527969|sp|Q2RZH8|RECR_SALRD RecName: Full=Recombination protein recR
gi|83756868|gb|ABC44981.1| recombination protein RecR [Salinibacter ruber DSM 13855]
gi|294344917|emb|CBH25695.1| Recombination protein recR [Salinibacter ruber M8]
Length = 237
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 37/232 (15%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T + +E L++ ++P G ++ARR +++K ++ + +A A+ ++ V CS C
Sbjct: 2 QYTSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTSVKEDVQRCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
V DPC IC +RDAS I VVE+ +DL A+E++ +YHVLGG +SPLD +GP+
Sbjct: 62 YVVADQDPCPICGSDKRDASTICVVEESSDLTAIEQTNEYRGVYHVLGGVISPLDGVGPD 121
Query: 124 DIGIQSLIERIE-------------------------------------VKKIRELIFAI 146
D+ + L RI+ + E+I A+
Sbjct: 122 DLRVHELATRIDPSFEDTAADAAPEPNTTPDGEADAEAPPSENGGADEAESGVDEVILAV 181
Query: 147 SATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ +EG TTA+YI L+ DV++TR+A G+P+G +L+Y D+ T+ A+ R
Sbjct: 182 NPNVEGDTTAYYISQLLEPFDVRVTRIARGLPIGGDLEYADEATLSRALEGR 233
>gi|309775006|ref|ZP_07670021.1| recombination protein RecR [Erysipelotrichaceae bacterium 3_1_53]
gi|308917224|gb|EFP62949.1| recombination protein RecR [Erysipelotrichaceae bacterium 3_1_53]
Length = 222
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K+ E L++ +PG G ++A R ++ E+ + A N + C +CG
Sbjct: 1 MYPKKFEALVECYRGLPGVGIKTAERYAFQTLEWDEETMDAWISAFENAKEGLKKCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D R++ +I VV+ D+ A+E++K +YHVL G +S I PED
Sbjct: 61 NLSENDKCDICDDHSRNSQIICVVQSPKDVIAMEKTKEYAGVYHVLNGVISTSKGILPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I SL+ RI + +E+I A + T+EG+TTA Y+ L+ V +TR+A+G+PMG LD
Sbjct: 121 INIDSLLSRITDET-QEIIIATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLD 179
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ +AI R
Sbjct: 180 YADELTLIKAIEGRKK 195
>gi|225012671|ref|ZP_03703106.1| recombination protein RecR [Flavobacteria bacterium MS024-2A]
gi|225003204|gb|EEG41179.1| recombination protein RecR [Flavobacteria bacterium MS024-2A]
Length = 206
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 126/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN ++ +A++PG G R+A R LHL+K+ + LA+A+ ++ + C C
Sbjct: 2 DFSSKLLENAVQEIAQLPGIGRRTALRLALHLLKQPVEHTQSLAKALTSLREGIIFCDRC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +R+ S++ VVED+ D+ A+E + N LYHVLGG +SP+D IGP+
Sbjct: 62 HNLSDAPTCEICSSPKRNKSILCVVEDIRDVMAIENTGQYNGLYHVLGGIISPMDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+E+++ ++ ELIFA+SAT+E TT YI LK ++K + +A GIP+G EL
Sbjct: 122 DLTINSLLEKVKNNEVSELIFALSATMEADTTNFYIYKLLKPFEIKTSTIARGIPVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D+ T+ +I +R
Sbjct: 182 EFTDEVTLGRSILARIPF 199
>gi|26990958|ref|NP_746383.1| recombination protein RecR [Pseudomonas putida KT2440]
gi|148546839|ref|YP_001266941.1| recombination protein RecR [Pseudomonas putida F1]
gi|37999624|sp|Q88F32|RECR_PSEPK RecName: Full=Recombination protein recR
gi|166221956|sp|A5W0U7|RECR_PSEP1 RecName: Full=Recombination protein recR
gi|24985981|gb|AAN69847.1|AE016623_9 recombination protein RecR [Pseudomonas putida KT2440]
gi|148510897|gb|ABQ77757.1| DNA replication and repair protein RecR [Pseudomonas putida F1]
gi|313497893|gb|ADR59259.1| RecR [Pseudomonas putida BIRD-1]
Length = 200
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEQELCPQCADPRRDDTQLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 122 GIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLVASRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ A R +
Sbjct: 182 MVDGGTLAHAFAGRRPI 198
>gi|6634593|emb|CAB64486.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+ICID RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICIDPSRDQTTILVLEDSRDVAVMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I +++L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKTLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|294141552|ref|YP_003557530.1| recombination protein RecR [Shewanella violacea DSS12]
gi|293328021|dbj|BAJ02752.1| recombination protein RecR [Shewanella violacea DSS12]
Length = 199
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + L +A+ + V C C
Sbjct: 3 FSPLVDELIQALKCLPGVGPKSAQRMAFQLLERDRKAGQSLGQALEKAMSDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRDASV-IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R S I VVE AD+ A+E + Y VL G LSPLD +GP++
Sbjct: 63 FTEEVHCPICASHKRGQSQLICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L E + ++ ELI A + T+EG TAH+I D K DV ++R+A+G+P+G EL+
Sbjct: 123 LGLALLEEHLASGEVSELILATNPTVEGDATAHFIADMAKIHDVIVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|6624708|emb|CAB63848.1| recombination protein [Streptococcus pneumoniae]
Length = 198
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + A+ + + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD + I+V+ED D+ ALE + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPIRDQTTILVLEDSRDVAALENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++
Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ AI +RT L
Sbjct: 182 YADEVTLLRAIENRTEL 198
>gi|317495189|ref|ZP_07953559.1| recombination protein RecR [Gemella moribillum M424]
gi|316914611|gb|EFV36087.1| recombination protein RecR [Gemella moribillum M424]
Length = 198
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 114/196 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K I +LI + +PG G ++A R H +K + + A+++ + K+ C IC
Sbjct: 3 YPKPILDLIDSYSLLPGIGRKTAVRLAFHTLKMHDDDIKNFADSLQGLKEKLTNCEICHR 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T C IC D RD S I VV + DL A+E + LYHVL G +SP+D IGP DI
Sbjct: 63 LSETHVCDICSDNSRDKSTICVVANDNDLVAMENMQQYRGLYHVLDGLISPMDGIGPMDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL ER + ++E+I A +++ EG+ TA +I LK D+K+TR+A GI GS+++Y
Sbjct: 123 NIKSLFERAQDATVKEIILATNSSPEGEGTASFISRYLKNTDIKVTRIAQGISFGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ AI R L
Sbjct: 183 VDEVTLSRAISGRIEL 198
>gi|119774449|ref|YP_927189.1| recombination protein RecR [Shewanella amazonensis SB2B]
gi|166221961|sp|A1S563|RECR_SHEAM RecName: Full=Recombination protein recR
gi|119766949|gb|ABL99519.1| recombination protein RecR [Shewanella amazonensis SB2B]
Length = 199
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L++ + LA+ ++ + V C C
Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +A + VVE AD+ A+E Y VL G LSPLD IGPE+
Sbjct: 63 FTEQSLCPICSSSRRGEADTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ++ I ELI A + T+EG TAHYI D + V ++R+A+G+P+G EL+
Sbjct: 123 LGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADIARRAGVAVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|120436597|ref|YP_862283.1| recombination protein RecR [Gramella forsetii KT0803]
gi|171460856|sp|A0M3M1|RECR_GRAFK RecName: Full=Recombination protein recR
gi|117578747|emb|CAL67216.1| recombination protein RecR [Gramella forsetii KT0803]
Length = 205
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E + ++++PG G R+A R LHL+K+ E+ L++A+ + + LC+ C
Sbjct: 2 DFSSKLLEQAVDEMSQLPGIGKRTALRLVLHLLKQPEEQTTQLSKALLELRQNIKLCNNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC + R + ++ VVED+ D+ A+E + YHVLGG +SP+D IGP
Sbjct: 62 YNISDTELCEICANPSRVSEIVCVVEDIRDVMAIENTGQYRGHYHVLGGKISPMDGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ LIE+++ KI E+IFA+S+T+EG TT YI +L+G +K + +A GI +G EL
Sbjct: 122 QLTIKPLIEKVQAGKIDEIIFALSSTLEGDTTNFYIFKQLEGTAIKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSITNRIPF 199
>gi|241889846|ref|ZP_04777144.1| recombination protein RecR [Gemella haemolysans ATCC 10379]
gi|241863468|gb|EER67852.1| recombination protein RecR [Gemella haemolysans ATCC 10379]
Length = 198
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K I +LI+ + +PG G ++A R H +K + + A+++ N+ +K+ C +CG
Sbjct: 3 YPKPILDLIESYSLLPGIGKKTAVRLAFHTLKMNDTDIKNFADSLVNLKDKLTNCEVCGR 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC D RD S I VV + DL A+E + +YHVL G +SP+D IGP DI
Sbjct: 63 LSEEHVCDICSDPGRDKSTICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+S+ ER + + ++E+I A +++ EG+ TA +I LK D+++TR+A GI GS+++Y
Sbjct: 123 NIKSIFERAQDETVKEIILATNSSPEGEGTASFISRYLKNTDIRVTRIAQGISFGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ AI R L
Sbjct: 183 VDEVTLSRAISGRIEL 198
>gi|124022680|ref|YP_001016987.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9303]
gi|171769768|sp|A2C8B2|RECR_PROM3 RecName: Full=Recombination protein recR
gi|123962966|gb|ABM77722.1| RecR protein [Prochlorococcus marinus str. MIT 9303]
Length = 189
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 75/188 (39%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I R+PG GPR+A+R LHL+++ E + AEA+ ++V C C ++ C
Sbjct: 2 IDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLCD 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC D R ++ VV D DL ALER++ YHVLGG +SP+D IGP+ + I SLI+R
Sbjct: 62 ICRDGTRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D+ T+
Sbjct: 122 VDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYADEVTLTR 180
Query: 194 AIRSRTVL 201
A+ R +
Sbjct: 181 ALEGRRAM 188
>gi|89900252|ref|YP_522723.1| recombination protein RecR [Rhodoferax ferrireducens T118]
gi|122479542|sp|Q21YG1|RECR_RHOFD RecName: Full=Recombination protein recR
gi|89344989|gb|ABD69192.1| recombination protein RecR [Rhodoferax ferrireducens T118]
Length = 196
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 82/192 (42%), Positives = 117/192 (60%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L R+PG G +SA R HL++ L+ A+ +++ C C
Sbjct: 5 NSLDVLIQALRRLPGVGVKSASRMAFHLLQHDRPGALALSRALQVAADQMRHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D CA C+D +RDAS + VVE AD ALER+ A + LY VL G LSPLD IGP+DIG+
Sbjct: 65 QADICATCLDPRRDASKLCVVETPADQSALERTGAYHGLYFVLMGKLSPLDGIGPKDIGL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L +R ++E+I A + T EG+ TAH I + LK +++TRLA G+P+GSEL+Y+D
Sbjct: 125 KGLFDRACDGTVQEVILATNFTAEGEATAHVISEGLKSRGLRLTRLARGVPVGSELEYVD 184
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 185 LGTIAHALLDRR 196
>gi|212634564|ref|YP_002311089.1| recombination protein RecR [Shewanella piezotolerans WP3]
gi|226739008|sp|B8CN00|RECR_SHEPW RecName: Full=Recombination protein recR
gi|212556048|gb|ACJ28502.1| Recombination protein RecR [Shewanella piezotolerans WP3]
Length = 199
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA+++ ++V C C
Sbjct: 3 FSPLVDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGSKLADSLGKAMSEVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC+ +R S VI VVE AD+ A+E + Y VL G LSPLD +GP++
Sbjct: 63 FTEETYCPICVSTKRGHSSVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + ++ ELI A + T+EG TAHYI D K ++ ++R+A+G+P+G EL+
Sbjct: 123 LGLALLETHLASGEVTELILATNPTVEGDATAHYIADMAKNHELAVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R +
Sbjct: 183 YVDSTTLALSFNGRLPI 199
>gi|257464254|ref|ZP_05628633.1| recombination protein recR [Fusobacterium sp. D12]
gi|317061771|ref|ZP_07926256.1| recombination protein recR [Fusobacterium sp. D12]
gi|313687447|gb|EFS24282.1| recombination protein recR [Fusobacterium sp. D12]
Length = 197
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 119/196 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K +E LI ++PG G +SA R H++ EQ + +A+ ++ K+ C +CG
Sbjct: 1 MAIKSLERLIDQFHKLPGIGRKSATRLGFHILDYSEQEIEDFIQALEDVKGKIKRCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC D+ RD I +VED D+ +LE++ LYH+LGG L+PL + P+
Sbjct: 61 DYCEDSLCPICADEARDRRSICIVEDSRDVISLEKTGKYRGLYHILGGKLAPLQGVTPDK 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++ L+ERI ++I+E+I A++ +EG+TTA Y++ LK D++IT++A GIPMG L+
Sbjct: 121 LNLKPLLERITKEEIQEIILALNPDLEGETTAMYLVKLLKPFDIRITKIASGIPMGGNLE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D TI A+ +R
Sbjct: 181 FADSATIARALDARQE 196
>gi|307822529|ref|ZP_07652760.1| recombination protein RecR [Methylobacter tundripaludum SV96]
gi|307736133|gb|EFO06979.1| recombination protein RecR [Methylobacter tundripaludum SV96]
Length = 215
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 114/189 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG GP++A+R HL+++ LA+ + K+ CS C +
Sbjct: 24 LGQLIQNLCCLPGVGPKTAQRMAFHLLQRDRNGANMLAQTLLQAIEKMRHCSQCRTLTEG 83
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D+ RD ++I +VE +D+W ++++ Y VL G LSPLD IGP+++G+
Sbjct: 84 ELCEICADKSRDDTLICIVESPSDVWIVDQATMFKGRYFVLHGRLSPLDGIGPDELGLDL 143
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L +++ I+ELI A ++T+EG+ TA++I + + V +R+A+G+PMG EL++ D G
Sbjct: 144 LEQQLATGHIKELILATNSTVEGEATAYFISELARKHQVPASRIAHGVPMGGELEFTDSG 203
Query: 190 TIFEAIRSR 198
T+ A R
Sbjct: 204 TLSHAFNGR 212
>gi|257454438|ref|ZP_05619700.1| recombination protein RecR [Enhydrobacter aerosaccus SK60]
gi|257448204|gb|EEV23185.1| recombination protein RecR [Enhydrobacter aerosaccus SK60]
Length = 202
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + L+K L +PG GP+SA+R LHL+ K L EA+ + + C +C
Sbjct: 1 MLTPKFDELVKQLKVLPGVGPKSAQRMALHLLSYKRPQGQALGEALIVAMHDIKQCQVCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C IC D +R+ V+ +VE AD+ A+E++ N Y VLGG LSP+D IG E
Sbjct: 61 GLSDEDICPICSDPRRNERVLCIVETAADMMAIEQTAGFNGKYFVLGGHLSPIDGIGVEQ 120
Query: 125 IGIQSLI-----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GI LI + + E+I A S T+EGQTTAH+I + +K I+R+A GIPM
Sbjct: 121 LGINQLIGLLKQHQAAQTPVEEIILATSTTVEGQTTAHFISEAVKPYVTHISRIAQGIPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G EL+YLD T+ +A+++R L
Sbjct: 181 GGELEYLDSMTLGQALQNRGRL 202
>gi|119945932|ref|YP_943612.1| recombination protein RecR [Psychromonas ingrahamii 37]
gi|171769144|sp|A1SWZ8|RECR_PSYIN RecName: Full=Recombination protein recR
gi|119864536|gb|ABM04013.1| DNA replication and repair protein RecR [Psychromonas ingrahamii
37]
Length = 199
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E+L++ L +P GP+SA+R HL+ K + L+ + N++ C C
Sbjct: 3 SSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CAIC + +R+ + +I VVE D+ A+E++ + Y VL G LSPLD +GPE
Sbjct: 63 FTEQNLCAICDNDKRNKNGMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGPEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +++ + E+I A + T+EG+ TA+YI + K +K++R+A+G+P+G EL+
Sbjct: 123 LGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEMAKRYAIKVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R+V
Sbjct: 183 YVDSTTLSHSFSGRSVF 199
>gi|71065354|ref|YP_264081.1| recombination protein RecR [Psychrobacter arcticus 273-4]
gi|123649110|sp|Q4FTL1|RECR_PSYA2 RecName: Full=Recombination protein recR
gi|71038339|gb|AAZ18647.1| DNA replication and repair protein RecR [Psychrobacter arcticus
273-4]
Length = 197
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 119/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + L+K L +PG G +SA+R LHL+ KK LA+A+ + C C
Sbjct: 1 MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C +C D +RD +++ VVE AD+ A+E++ Y VLGG LSP+D I +D
Sbjct: 61 SFSDDAVCPLCQDPRRDDALLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ R++ + + ELI A T+EGQTTAH+I + + K+TRLA G+PMG EL+
Sbjct: 121 LNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFINEAVSRHVNKVTRLAQGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD T+ +A+++R+ L
Sbjct: 181 YLDSMTLGQAMQNRSFL 197
>gi|17545913|ref|NP_519315.1| recombination protein RecR [Ralstonia solanacearum GMI1000]
gi|20139463|sp|Q8Y050|RECR_RALSO RecName: Full=Recombination protein recR
gi|17428208|emb|CAD14896.1| probable recombination protein recr [Ralstonia solanacearum
GMI1000]
Length = 207
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|254427941|ref|ZP_05041648.1| recombination protein RecR [Alcanivorax sp. DG881]
gi|196194110|gb|EDX89069.1| recombination protein RecR [Alcanivorax sp. DG881]
Length = 200
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 110/195 (56%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ LI +PG GPRSA+R L+ + + L +A+ + V C C N
Sbjct: 4 APLVDQLINAFTCLPGVGPRSAQRMAYALLDRGRESGRRLGDALHAAMDGVQHCQRCRNY 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C +C D +RDAS++ +V D+ A E+S Y VL G LSPLD +GP ++G
Sbjct: 64 AEAELCPVCDDPRRDASLVCIVATPGDVLAFEQSGEYRGQYFVLMGELSPLDGVGPRELG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L +R+ +I ELI A T+EG+ TAHY++D + V ++R+A G+PMG EL+++
Sbjct: 124 LDVLEQRLNEGQISELILATGTTVEGEATAHYVLDLAQDAGVGVSRIAQGVPMGGELEFV 183
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A+R R
Sbjct: 184 DGATLAQALRGRRPF 198
>gi|145298808|ref|YP_001141649.1| recombination protein RecR [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166221920|sp|A4SLX9|RECR_AERS4 RecName: Full=Recombination protein recR
gi|142851580|gb|ABO89901.1| recombination protein RecR [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 200
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ ++K L +PG GP+SA+R L++++ LA+ + ++ CS C
Sbjct: 3 FSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLNRALTEIGHCSHCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC + +R+ S ++ VVE AD+ A+E + + Y VL G LSPLD IGPE+
Sbjct: 63 FTENALCEICANPKREESGLLCVVESPADVAAIEHTGQFSGRYFVLMGHLSPLDGIGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G++ L +R++ + I ELI A + TIEG TA YI D + VK++R+A+G+P+G EL+
Sbjct: 123 LGLEILEQRLKAESISELILATNPTIEGDATAWYIADMARAAGVKVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLMGRQPL 199
>gi|85707835|ref|ZP_01038901.1| recombinational DNA repair protein [Erythrobacter sp. NAP1]
gi|85689369|gb|EAQ29372.1| recombinational DNA repair protein [Erythrobacter sp. NAP1]
Length = 198
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 104/196 (53%), Positives = 142/196 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L LVK +EQ L L EA+ + + C ICG
Sbjct: 1 MASQEIEALSSALARLPGLGPRSARRAVLWLVKNREQALPALLEALDAVSETLVECQICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT+DPC IC D +RD + VVEDVAD+WAL+R++ YHVLGG LS LD IGP+D
Sbjct: 61 NVDTSDPCGICADPRRDPKSLCVVEDVADVWALDRARLFQGRYHVLGGKLSALDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ER ++ E++ A++AT+EGQTTAHY+ ++L ++IT+LA+G+P+G ELD
Sbjct: 121 LNIASLMERAANGEVEEVVLAMNATLEGQTTAHYLAERLDEHKLRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|329121192|ref|ZP_08249820.1| recombination protein R [Dialister micraerophilus DSM 19965]
gi|327470274|gb|EGF15735.1| recombination protein R [Dialister micraerophilus DSM 19965]
Length = 196
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + + ++PG G +SA+R ++ + ++ + + + N VC CSIC N+ T+
Sbjct: 5 LEEVAEQFRKLPGIGVKSAKRLAYFMLMRPQKDIDTFLKTIENAKKSVCYCSICCNLATS 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D +R++S++ +VE+ D+ A+E+S N LYHVL G LSPLD IGPE++ I+
Sbjct: 65 DPCSICTDSKRNSSLLCIVENPQDVHAMEQSHEYNGLYHVLHGVLSPLDGIGPENLKIKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ I E+I A EG+ TA+YI D +K +KITR A G+P GS + Y D
Sbjct: 125 LLTRLKDSNINEVIIATDPDTEGEATAYYIADLIKPSGIKITRPARGLPAGSNIGYADSI 184
Query: 190 TIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 185 TLANAVENRKEI 196
>gi|291460810|ref|ZP_06600200.1| recombination protein RecR [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416583|gb|EFE90302.1| recombination protein RecR [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 198
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K+I L+ L+R+PG G +SA+R +++ + L+E++ + + C C
Sbjct: 2 EYFSKDIARLVTELSRLPGVGVKSAQRLAFYIINSPLEQAEALSESILSAKKNIRYCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ ++ C +C ++R+ I+VVE+ D+ A ER+ +YHVL G++SP+ IGPE
Sbjct: 62 FTITDSELCPVCASEERNHRQIMVVENPRDMGAYERTGRYRGVYHVLHGAISPMLGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L++R+ K + E+I A ++++EG+TTA Y+ +K ++++R+A G+P+G ++
Sbjct: 122 DIRLKELMQRL-QKPVDEVIIATNSSLEGETTATYLTKLIKPSGIRLSRIASGVPVGGDI 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R +L
Sbjct: 181 ENIDEVTLLRALDGRVIL 198
>gi|170017865|ref|YP_001728784.1| recombination protein RecR [Leuconostoc citreum KM20]
gi|238688935|sp|B1MVT6|RECR_LEUCK RecName: Full=Recombination protein recR
gi|169804722|gb|ACA83340.1| Recombination protein RecR [Leuconostoc citreum KM20]
Length = 201
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 118/199 (59%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R + + +E + ++++ + + C ICGN
Sbjct: 3 YPEPIAKLINSYTKLPGIGPKTATRLAFYTLGMQEDDVVDFSKSLLSAKKDLTFCRICGN 62
Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ +PCAIC D+ RD S + VVE+ D+ A+E ++ LYHVL G +SP GPE
Sbjct: 63 ITENSVNPCAICQDKSRDQSTVFVVENSRDVMAMENTRDYYGLYHVLNGVISPSAGTGPE 122
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I E+I +A EG+ TA Y+ LK +K+TRLA+G+ +GS+
Sbjct: 123 DINLPSLIRRLSDHQEINEVIVGTNANAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D T+ +A++ RT L
Sbjct: 183 IDYADQLTLIKAVQGRTEL 201
>gi|145588887|ref|YP_001155484.1| recombination protein RecR [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189029366|sp|A4SWQ6|RECR_POLSQ RecName: Full=Recombination protein recR
gi|145047293|gb|ABP33920.1| DNA replication and repair protein RecR [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 204
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 112/195 (57%), Gaps = 4/195 (2%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI+ L +PG GP+SA+R +L++ LA+++ + V C+ C
Sbjct: 10 ALGRLIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVDTVGHCARCNTFSE 69
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
T C+ C D +RD S++ +VE AD +E++ + Y VL G +SPLD +GP +I
Sbjct: 70 TQICSTCADGRRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRISPLDGMGPNEIHFD 129
Query: 129 SLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
L+ RIE IRE++ A + T EG+ TAHYI + LK +K+TR+A GIP+G EL+
Sbjct: 130 RLLTRIENPDTGVPIREVVLATNFTSEGEATAHYIGEVLKAKGIKVTRIARGIPVGGELE 189
Query: 185 YLDDGTIFEAIRSRT 199
Y+D GT+ A+ R
Sbjct: 190 YVDAGTLARALMDRR 204
>gi|225872190|ref|YP_002753645.1| recombination protein RecR [Acidobacterium capsulatum ATCC 51196]
gi|254790744|sp|C1F111|RECR_ACIC5 RecName: Full=Recombination protein recR
gi|225793113|gb|ACO33203.1| recombination protein RecR [Acidobacterium capsulatum ATCC 51196]
Length = 199
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 124/196 (63%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI+ L ++PG G RSA+R H+++ LA A+ ++ ++ LCS+C N
Sbjct: 4 FAEPMARLIEELRKLPGIGTRSAQRLAFHILRSSTADAEALAGAVRDLKAQLRLCSVCNN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC C R+ ++ VVE+ ++ A+E+++ N +YHVL G+LSPL +GPE +
Sbjct: 64 ITDVDPCVFCSSPTRNQRLVCVVEEPTNIAAVEKTRGYNGVYHVLHGTLSPLHGVGPEHL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+L+ R+E ++ ELI A S T+EG+ TA+Y+ D L+ + V++TR+A G+P GS+++Y
Sbjct: 124 RTVNLLARVERGEVDELILATSPTVEGEATANYLADLLRPLRVRLTRIATGVPAGSDIEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ R L
Sbjct: 184 VDEVTMTRALEGRREL 199
>gi|56476072|ref|YP_157661.1| recombination protein RecR [Aromatoleum aromaticum EbN1]
gi|73621456|sp|Q5P7F1|RECR_AZOSE RecName: Full=Recombination protein recR
gi|56312115|emb|CAI06760.1| DNA repair DNA recombination zinc-finger protein [Aromatoleum
aromaticum EbN1]
Length = 197
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ ++ LI L +PG GP+SA+R HL+++ ++ LA A+ N + C C
Sbjct: 1 MSPSSLDELIDALRGLPGVGPKSAQRMAYHLLQRDQRGAERLARALGNALAVLRHCERCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
T+ C C QRDAS++ VVE ADL +E++ A N LY+VL G LSPLD IGP +
Sbjct: 61 TFTETEICQRCASPQRDASLLCVVEMPADLAVIEQTHAYNGLYYVLMGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L+ R+ ++E+I A + T EG+ TAH + + L ++++RL+ G+P+G EL+
Sbjct: 121 LKFDKLLARVADSTVQEVILATNFTNEGEATAHIVAELLAARGIRVSRLSRGVPVGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+ D GTI +A+ R L
Sbjct: 181 HTDTGTIAQALVERRPL 197
>gi|255036664|ref|YP_003087285.1| recombination protein RecR [Dyadobacter fermentans DSM 18053]
gi|254949420|gb|ACT94120.1| recombination protein RecR [Dyadobacter fermentans DSM 18053]
Length = 204
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 82/201 (40%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE + ++R+PG G ++A R LHL+K+ E+ L++A+ N+ K CS C
Sbjct: 2 NYPSRLIEEAVAEISRLPGIGKKTALRLALHLLKRDEEQTRSLSDALLNMRTKTTYCSRC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + +RD + I VV D D+ A+E + LYHVLGG +SPL+ IGP
Sbjct: 62 HNIADDTLCNICSNNKRDQATICVVVDTRDVLAIESTNQYRGLYHVLGGIISPLEGIGPS 121
Query: 124 DIGIQSLIERIE----VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
D+ I SL+ RIE + +RE+I A+S T+EG TTA Y+ +LK + VKI+ +A GIP+
Sbjct: 122 DLEIDSLMSRIEKKEGDEAVREVILALSPTMEGDTTAFYLQKRLKALGVKISTIARGIPI 181
Query: 180 GSELDYLDDGTIFEAIRSRTV 200
G +L+Y D+ T+ +I SR
Sbjct: 182 GGDLEYADEITLGRSIVSRVA 202
>gi|220924616|ref|YP_002499918.1| recombination protein RecR [Methylobacterium nodulans ORS 2060]
gi|254790776|sp|B8IFQ5|RECR_METNO RecName: Full=Recombination protein recR
gi|219949223|gb|ACL59615.1| recombination protein RecR [Methylobacterium nodulans ORS 2060]
Length = 201
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 118/201 (58%), Positives = 153/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA L L+KK+E LL PLAEAM ++ +C
Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKREALLAPLAEAMRVACERIVVC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT+DPC IC D RD S+++VVEDV+DLWALERS AV A YHVLGG LS LD I
Sbjct: 61 HECGNVDTSDPCTICRDHSRDPSILVVVEDVSDLWALERSGAVTARYHVLGGVLSALDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE++ + L+ER V ++RE+I A++AT++GQTTAHYI + L + VK+T+LA+G+P+G
Sbjct: 121 RPENLNLSRLVERASVPEMREVILALNATVDGQTTAHYITELLAHLPVKVTKLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR RT
Sbjct: 181 GELDYLDEGTLSAAIRQRTAF 201
>gi|113970587|ref|YP_734380.1| recombination protein RecR [Shewanella sp. MR-4]
gi|114047818|ref|YP_738368.1| recombination protein RecR [Shewanella sp. MR-7]
gi|123130341|sp|Q0HHZ4|RECR_SHESM RecName: Full=Recombination protein recR
gi|123326453|sp|Q0HU94|RECR_SHESR RecName: Full=Recombination protein recR
gi|113885271|gb|ABI39323.1| DNA replication and repair protein RecR [Shewanella sp. MR-4]
gi|113889260|gb|ABI43311.1| DNA replication and repair protein RecR [Shewanella sp. MR-7]
Length = 199
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C
Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDIGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +S I VVE AD+ A+E + Y VL G LSPLD +GPE+
Sbjct: 63 YTEESLCPICASHKRGSSSTICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVVISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRIPL 199
>gi|228473616|ref|ZP_04058368.1| recombination protein RecR [Capnocytophaga gingivalis ATCC 33624]
gi|228274988|gb|EEK13798.1| recombination protein RecR [Capnocytophaga gingivalis ATCC 33624]
Length = 202
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 127/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++++PG G R+A R LHL+K+ LA ++ ++ N++ C C
Sbjct: 2 DFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPPAQTERLAASLVSLVNEITYCKQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC + RD+S++ VVEDV D+ A+E + N LYHVLGG +SP+D +GP
Sbjct: 62 HNISDTEICDICANIHRDSSLLCVVEDVRDVMAIENTGQYNGLYHVLGGKISPIDGVGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+++++ ++E+IFA+S T+EG TT YI +L+G+D+ + +A GI +G EL
Sbjct: 122 ELTIASLVKKVKEGSVKEIIFALSNTMEGDTTNFYIYRQLEGLDITTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYTDEVTLGRSILHRIPF 199
>gi|213966435|ref|ZP_03394612.1| recombination protein RecR [Corynebacterium amycolatum SK46]
gi|213950928|gb|EEB62333.1| recombination protein RecR [Corynebacterium amycolatum SK46]
Length = 208
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R +L+K + + +G L A+ + V C +CG
Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFYLMKAEPEDIGRLQSALGRVREGVQFCRVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TD C C D +RD ++ VVE+ D+ A+ER+ N YHVLGG+L PL IGP +
Sbjct: 61 NISETDVCQYCSDTRRDRGLVCVVEEARDIQAIERTGEYNGRYHVLGGALDPLGGIGPNE 120
Query: 125 IGIQSLIERIEV----------KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRL 173
+ I++L++RI +I E+I A EG+ TA Y+ L+ D+++TRL
Sbjct: 121 LNIRTLLQRIAGVLDDVDETQPPEIHEVIIATDPNTEGEATATYLARLLRDFPDLEVTRL 180
Query: 174 AYGIPMGSELDYLDDGTIFEAIRSR 198
A G+P+G +L+++D+ T+ A+ R
Sbjct: 181 ASGMPLGGDLEFVDELTLSRALTGR 205
>gi|167750679|ref|ZP_02422806.1| hypothetical protein EUBSIR_01656 [Eubacterium siraeum DSM 15702]
gi|167656358|gb|EDS00488.1| hypothetical protein EUBSIR_01656 [Eubacterium siraeum DSM 15702]
gi|291532022|emb|CBK97607.1| recombination protein RecR [Eubacterium siraeum 70/3]
gi|291558240|emb|CBL35357.1| recombination protein RecR [Eubacterium siraeum V10Sc8a]
Length = 198
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 117/198 (59%), Gaps = 2/198 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + + + A++PG G ++A+R +++ E+ + A + + LCS+C
Sbjct: 3 EYNSQPLITAAQEFAKLPGIGLKTAQRLAYYILNAPEEEVEQFASGILRARRSMKLCSVC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ TD C IC D +R+ VI VVE D+ A+ERS + +YHVL G LSP++ IGP+
Sbjct: 63 QNICNTDKCDICSDSRRNHKVICVVESPKDVSAIERSGGFDGVYHVLHGLLSPMNSIGPQ 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+ L+ R+ E+I A S TIEG+ TA Y+ +K + VK+TRLAYG+P G+ L
Sbjct: 123 QLKIKELMARLSDTD--EVIMATSPTIEGEATATYLSRMIKQLGVKVTRLAYGLPAGASL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y DD T+ A+ +R +
Sbjct: 181 EYADDVTLQRALENRNEI 198
>gi|184154761|ref|YP_001843101.1| recombination protein RecR [Lactobacillus fermentum IFO 3956]
gi|227514028|ref|ZP_03944077.1| recombination protein RecR [Lactobacillus fermentum ATCC 14931]
gi|260663210|ref|ZP_05864102.1| recombination protein RecR [Lactobacillus fermentum 28-3-CHN]
gi|229890154|sp|B2GAD9|RECR_LACF3 RecName: Full=Recombination protein recR
gi|183226105|dbj|BAG26621.1| recombination protein RecR [Lactobacillus fermentum IFO 3956]
gi|227087614|gb|EEI22926.1| recombination protein RecR [Lactobacillus fermentum ATCC 14931]
gi|260552402|gb|EEX25453.1| recombination protein RecR [Lactobacillus fermentum 28-3-CHN]
Length = 199
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G +SA R + + + + A+++ + + CS+CGN
Sbjct: 3 YPEPIARLIDSYMKLPGIGEKSATRLAFYTLGMSDADVDNFAKSLRAVKRDLHYCSVCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D+ RD S ++VVE D+ A+ER K + LYHVL G++SP + GP+DI
Sbjct: 63 ITEDDPCPICKDKTRDQSRVLVVERSRDIMAMERMKEYHGLYHVLHGTISPSEGTGPQDI 122
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
++SL++R+E K+I+E+I A +A+++G+TTA Y+ +K +K+TRLA+G+ G+++D
Sbjct: 123 NLESLLKRLEAHKEIQEVIVATNASLDGETTAQYLAHLIKPAGIKVTRLAHGLSAGADID 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+F A++ RT +
Sbjct: 183 YTDEVTLFRAVQGRTEM 199
>gi|117920887|ref|YP_870079.1| recombination protein RecR [Shewanella sp. ANA-3]
gi|166221966|sp|A0KY04|RECR_SHESA RecName: Full=Recombination protein recR
gi|117613219|gb|ABK48673.1| DNA replication and repair protein RecR [Shewanella sp. ANA-3]
Length = 199
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C
Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDIGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+
Sbjct: 63 YTEESLCPICSSHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVVISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRIPL 199
>gi|312962438|ref|ZP_07776929.1| Recombination protein recR [Pseudomonas fluorescens WH6]
gi|311283365|gb|EFQ61955.1| Recombination protein recR [Pseudomonas fluorescens WH6]
Length = 206
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C C
Sbjct: 9 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRT 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 69 LTEEELCPQCADPRRDDTLLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 127
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 128 GIPQLVARIEEQGTFSEVILATNPTVEGEATAHYIAQLLSNKGLITSRIAHGVPLGGELE 187
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 188 LVDGGTLAHSFAGRKPI 204
>gi|332521184|ref|ZP_08397642.1| recombination protein RecR [Lacinutrix algicola 5H-3-7-4]
gi|332043277|gb|EGI79474.1| recombination protein RecR [Lacinutrix algicola 5H-3-7-4]
Length = 240
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 127/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+K+ ++ L++A+ ++ + C C
Sbjct: 37 EFSSKLLENAVNEISQLPGIGKRTALRLALHLLKQPKEQTTNLSQAITHMREDLKFCRSC 96
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC + R VI VVED+ D+ A+E + + LYHVLGG ++P++ IGP
Sbjct: 97 HNISDVDLCEICANPLRKKDVICVVEDIRDVMAIENTASHKGLYHVLGGKINPIEGIGPH 156
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLIE+++ I+ELIFA+S T+EG TT YI +L+G++V+ + +A GI +G EL
Sbjct: 157 DLNIVSLIEKVKSGNIKELIFALSPTMEGDTTNFYIFKQLQGLEVQTSTIARGISVGDEL 216
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 217 EYADEVTLGRSILNRIPF 234
>gi|134096870|ref|YP_001102531.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 2338]
gi|133909493|emb|CAL99605.1| putative recombination and repair protein [Saccharopolyspora
erythraea NRRL 2338]
Length = 190
Score = 276 bits (708), Expect = 8e-73, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I L R+PG GP+SA+R HL+ + + L E + + V C ICGNV C
Sbjct: 2 IDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICGNVSEEPTCR 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + ++ L+ R
Sbjct: 62 ICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQLRVRELLTR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTIF 192
I +I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+ T+
Sbjct: 122 IGRDEITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDLEFADELTLG 181
Query: 193 EAIRSRTV 200
A+ R
Sbjct: 182 RALSGRRA 189
>gi|299531589|ref|ZP_07044994.1| recombination protein RecR [Comamonas testosteroni S44]
gi|298720305|gb|EFI61257.1| recombination protein RecR [Comamonas testosteroni S44]
Length = 196
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 80/192 (41%), Positives = 118/192 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C
Sbjct: 5 QSLDALIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D RD + + VVE ADL A+ER+ A Y+VL G LSPLD +GP++IG+
Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTGAYQGYYYVLMGRLSPLDGVGPKEIGM 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER ++E+I A S T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAVSEALKSRGILVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 185 LGTIAHALVDRR 196
>gi|330829301|ref|YP_004392253.1| Gap repair protein with type I DNA topoisomerase domain [Aeromonas
veronii B565]
gi|328804437|gb|AEB49636.1| Gap repair protein with type I DNA topoisomerase domain [Aeromonas
veronii B565]
Length = 200
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ ++K L +PG GP+SA+R L++++ LA+ ++ ++ CS C
Sbjct: 3 FSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLSRALTEIGHCSHCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R+ ++ VVE AD+ A+E++ + Y VL G LSPLD IGPE+
Sbjct: 63 FTENDRCDICANPKREENGLLCVVESPADVAAIEQTGQFSGRYFVLMGHLSPLDGIGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R++ + I ELI A + TIEG TA YI D + V+++R+A+G+P+G EL+
Sbjct: 123 LGLDILERRLKEEHISELILATNPTIEGDATAWYIADMARTAGVEVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLMGRQRL 199
>gi|325274400|ref|ZP_08140489.1| recombination protein RecR [Pseudomonas sp. TJI-51]
gi|324100472|gb|EGB98229.1| recombination protein RecR [Pseudomonas sp. TJI-51]
Length = 200
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEQDLCPQCADPRRDDTQLCVVEGPTDVYAVEQAG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 122 GIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLNEKGLVASRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ A R +
Sbjct: 182 LVDGGTLAHAFAGRRPI 198
>gi|227506002|ref|ZP_03936051.1| recombination protein RecR [Corynebacterium striatum ATCC 6940]
gi|227197284|gb|EEI77332.1| recombination protein RecR [Corynebacterium striatum ATCC 6940]
Length = 218
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 122/215 (56%), Gaps = 21/215 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R H++ + + L A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHVLHMDPEDVDRLQNALGAVRDGVTFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC++ QRDAS I VVE+ D+ +ER+ N YHVLGG+L PL +GP+D
Sbjct: 61 NISREEVCRICVNSQRDASTICVVEEPKDIQVIERTGEYNGRYHVLGGALDPLANVGPKD 120
Query: 125 IGIQSLIERIE--------------------VKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++RI +I+E+I A EG+ TA Y++ L+
Sbjct: 121 LNISALLQRIGGVLPDRELADSTPDAPLYDTTPEIKEVILATDPNTEGEATAAYLVRLLR 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
D+KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 181 DFPDLKITRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|264677768|ref|YP_003277674.1| recombination protein RecR [Comamonas testosteroni CNB-2]
gi|262208280|gb|ACY32378.1| recombination protein RecR [Comamonas testosteroni CNB-2]
Length = 196
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 80/192 (41%), Positives = 118/192 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C
Sbjct: 5 QSLDTLIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D RD + + VVE ADL A+ER+ A Y+VL G LSPLD +GP++IG+
Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTGAYQGYYYVLMGRLSPLDGVGPKEIGM 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER ++E+I A S T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAVSEALKSRGILVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 185 LGTIAHALVDRR 196
>gi|94500849|ref|ZP_01307375.1| recombination protein RecR [Oceanobacter sp. RED65]
gi|94426968|gb|EAT11950.1| recombination protein RecR [Oceanobacter sp. RED65]
Length = 199
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 115/195 (58%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I L++ L +PG GP+SA+R LHL++K + L ++ ++V C C N+
Sbjct: 5 SPLINELVEALTILPGVGPKSAQRLALHLLEKDQSGAHRLVGMLSKALDEVGHCKKCRNL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D +R + VVE A++ A+E++ Y VL G LSP+D IGPE +G
Sbjct: 65 TEKEYCPICDDAKRTDEQLCVVETPAEVLAIEQTG-FKGRYFVLFGRLSPIDGIGPEKLG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L +++ ++E+I A + T+EGQ T+ YI L+G +V ITR+A+G+P+G EL+Y+
Sbjct: 124 LDQLKQQVVENGVKEVILATNPTVEGQATSQYIQQMLQGSNVLITRIAHGVPLGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D GT+ A+ R
Sbjct: 184 DGGTLAHALAGRKAF 198
>gi|144898668|emb|CAM75532.1| Recombinational DNA repair protein (RecF pathway) [Magnetospirillum
gryphiswaldense MSR-1]
Length = 196
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 142/197 (72%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+++L+R+PG GPRSARR LHLV+K+E LL PLA+A++ + + V CS+CG
Sbjct: 1 MVGPEIERLMQLLSRLPGLGPRSARRVALHLVEKRETLLLPLAKALSAVGDSVKTCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N D+ DPC+IC D +RD +++ VVE V LWA+ER+ + YHVLGG LS LD IGP+D
Sbjct: 61 NFDSVDPCSICADPRRDQTILCVVEGVGSLWAMERASVFSGRYHVLGGLLSALDGIGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R+ IRE++ A AT+EGQTTAHYI D L + ++ LA+G+P+G ELD
Sbjct: 121 LGLGRLRARL-DGSIREVVVATPATVEGQTTAHYIADFLADCGITVSGLAHGVPVGGELD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
YLDDGTI A+R+R
Sbjct: 180 YLDDGTIGAALRARRSF 196
>gi|330808466|ref|YP_004352928.1| Recombination protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376574|gb|AEA67924.1| Recombination protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 200
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C +C
Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGSRLAQALSQAMEGVGHCRLCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEDDLCPQCADPRRDDSLLCVVEGPMDVYAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI LI RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 122 GIPQLIARIEEAGTFTEVILATNPTVEGEATAHYIAQLLNNKGLIASRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|296111511|ref|YP_003621893.1| recombination protein RecR [Leuconostoc kimchii IMSNU 11154]
gi|295833043|gb|ADG40924.1| recombination protein RecR [Leuconostoc kimchii IMSNU 11154]
Length = 201
Score = 276 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + E + ++++ + N + CSICGN
Sbjct: 3 YPEPIAKLIDSYTKLPGIGSKTATRLAFYTLGMNEDDVVDFSKSLLSAKNDLTFCSICGN 62
Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ +PC IC D RD S + VVE+ D+ A+E ++ + LYHVL G +SPL GPE
Sbjct: 63 ITENSMNPCVICQDTSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPLAGTGPE 122
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I E+I + EG+ TA Y+ LK +K+TRLA+G+ +GS+
Sbjct: 123 DINLPSLIRRLSQHQEIDEVIVGTNVNAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D T+ +A++ RT L
Sbjct: 183 IDYADQLTLIKAVQGRTEL 201
>gi|39995207|ref|NP_951158.1| recombination protein RecR [Geobacter sulfurreducens PCA]
gi|73621487|sp|Q74GZ7|RECR_GEOSL RecName: Full=Recombination protein recR
gi|39981969|gb|AAR33431.1| recombination protein RecR [Geobacter sulfurreducens PCA]
gi|298504212|gb|ADI82935.1| recombination protein RecR [Geobacter sulfurreducens KN400]
Length = 197
Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L+ L ++PG G ++A R HL+K + LA+++ ++ ++V CS+C
Sbjct: 4 FSDSLSRLLAELQKLPGVGEKTALRLAFHLLKSPDNAA-ALADSLRDVMSRVRFCSVCFG 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC C D RD I VVE+ DL A+ER++A YHVL G+LSPL+ + P+ +
Sbjct: 63 ITEDDPCRFCSDA-RDDGAICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++R+E +RE++ A + T+EG+ TA Y+ +K + V++TRLA+GIP+GS+L++
Sbjct: 122 RVAELMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSDLEF 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 VDAATVQRALEGRSEL 197
>gi|120598525|ref|YP_963099.1| recombination protein RecR [Shewanella sp. W3-18-1]
gi|146293396|ref|YP_001183820.1| recombination protein RecR [Shewanella putrefaciens CN-32]
gi|166221965|sp|A4Y7T8|RECR_SHEPC RecName: Full=Recombination protein recR
gi|166221967|sp|A1RIQ0|RECR_SHESW RecName: Full=Recombination protein recR
gi|120558618|gb|ABM24545.1| DNA replication and repair protein RecR [Shewanella sp. W3-18-1]
gi|145565086|gb|ABP76021.1| recombination protein RecR [Shewanella putrefaciens CN-32]
gi|319426699|gb|ADV54773.1| recombination protein RecR [Shewanella putrefaciens 200]
Length = 199
Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+
Sbjct: 63 YTEETLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLASGDVSELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|300933816|ref|ZP_07149072.1| recombination protein RecR [Corynebacterium resistens DSM 45100]
Length = 218
Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 20/217 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++++I +R+PG GP+SA+R LHL++ + + L A+ + + V C IC
Sbjct: 1 MFEGPLQDVIDEFSRLPGIGPKSAQRIALHLMEVEAEDLKRFQAALGRLQDGVAFCRICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D RD S+I VVE+ D+ +ER+ YHVLGG+L PL +GP++
Sbjct: 61 NISQEDICRICADSSRDKSIICVVEESKDIQVIERTAEYRGRYHVLGGALDPLAGVGPKE 120
Query: 125 IGIQSLIERIE-------------------VKKIRELIFAISATIEGQTTAHYIMDKLKG 165
+ + L++RI +I E+I A EG+ TA Y+ LK
Sbjct: 121 LNVTPLVQRIGGVLNDVARPGEGDEVVYDPAPEIEEVIIATDPNTEGEATASYLGRLLKD 180
Query: 166 I-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+K+TRLA GIPMG +L+++D+ T+ A RT L
Sbjct: 181 FPGLKVTRLASGIPMGGDLEFVDELTLSRAFAGRTAL 217
>gi|237808960|ref|YP_002893400.1| recombination protein RecR [Tolumonas auensis DSM 9187]
gi|259563707|sp|C4L8U4|RECR_TOLAT RecName: Full=Recombination protein recR
gi|237501221|gb|ACQ93814.1| recombination protein RecR [Tolumonas auensis DSM 9187]
Length = 200
Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L++++ + L + + ++ C C
Sbjct: 3 FSPLLDALIRELQVLPGVGPKSAQRMAFQLLERERKRGMQLGQTLQRALTEIGHCQHCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC + +R ++ + +VE AD+ A+E++ + Y VL G LSPLD IGP++
Sbjct: 63 FTENSLCDICANPKRAESGQLCIVETPADVAAIEQTHLYSGRYFVLMGHLSPLDGIGPKE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ++ + +E+I A + TIEG TA YI K + ITR+A+G+P+G EL+
Sbjct: 123 LGLDQLDNVLQGGQWKEVILATNPTIEGDATAFYIASMAKRYQINITRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
+D T+ ++ R L
Sbjct: 183 LVDGTTLSHSLSGRRPL 199
>gi|330953815|gb|EGH54075.1| recombination protein RecR [Pseudomonas syringae Cit 7]
Length = 200
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA+A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCADTRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|329770460|ref|ZP_08261839.1| recombination protein recR [Gemella sanguinis M325]
gi|328836315|gb|EGF85981.1| recombination protein recR [Gemella sanguinis M325]
Length = 198
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 114/196 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K I +LI + +PG G ++A R H +K + + A+++ + K+ C +C
Sbjct: 3 YPKPILDLIDSYSLLPGIGRKTAIRLAFHTLKMNDNDINNFAKSLVELKEKLTNCEVCHR 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T C IC D RD S I VV + DL A+E + +YHVL G +SP+D IGP DI
Sbjct: 63 LSETSVCDICTDNSRDKSTICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL ER + ++E+I A +++ EG+ TA +I LK D+K+TR+A GI GS+++Y
Sbjct: 123 NIKSLFERAQDPIVKEIILATNSSPEGEGTASFISKYLKNTDIKVTRIAQGISFGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ AI R +
Sbjct: 183 VDEVTLSRAISGRIEI 198
>gi|254293233|ref|YP_003059256.1| recombination protein RecR [Hirschia baltica ATCC 49814]
gi|254041764|gb|ACT58559.1| recombination protein RecR [Hirschia baltica ATCC 49814]
Length = 199
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 106/199 (53%), Positives = 141/199 (70%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + G EI LI++++++PG GPRSARRA LHL+KK EQLL P+A AMA+ KV C
Sbjct: 1 MSNRSVGPEITRLIEMMSKLPGMGPRSARRAALHLLKKPEQLLAPMARAMADAAQKVSAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN DT +PCA+C RD +V+ V+ DV DLWA+ERS YHVLGG LS LD I
Sbjct: 61 DVCGNFDTLNPCAVCQATGRDEAVLCVLADVGDLWAMERSGVFRGRYHVLGGCLSALDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ I SLI R +++E+I A++AT++GQTTAHY+ D+L+ V ++RLA+G+P+G
Sbjct: 121 GPDDLNIASLISRAGQDQVKEVILALNATVDGQTTAHYVADQLENSGVIVSRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
EL LDDGTI A SR
Sbjct: 181 GELGSLDDGTIAAAFSSRR 199
>gi|294012440|ref|YP_003545900.1| recombination protein RecR [Sphingobium japonicum UT26S]
gi|292675770|dbj|BAI97288.1| recombination protein RecR [Sphingobium japonicum UT26S]
Length = 198
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 103/197 (52%), Positives = 146/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + L+R+PG GPRSARRA LHL+KK+E L PL A+ + ++ CS+CG
Sbjct: 1 MASPEIEELTQALSRLPGLGPRSARRAVLHLLKKRESALEPLLRALDAVNERLVTCSLCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA + VVEDVADLWAL++S+ +HVLGG LS L+ + PED
Sbjct: 61 NVDTVDPCGICADPRRDARALCVVEDVADLWALDKSRLFPGRFHVLGGRLSALEGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ V++T+LA+G+P+G ELD
Sbjct: 121 LSIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPVRLTQLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 181 YLDEGTLAQALRARRPL 197
>gi|322417713|ref|YP_004196936.1| recombination protein RecR [Geobacter sp. M18]
gi|320124100|gb|ADW11660.1| recombination protein RecR [Geobacter sp. M18]
Length = 197
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 124/196 (63%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L+ L ++PG G +SA R HL+K + L+E++ + KV CS+C
Sbjct: 4 FSRSLTRLVGELKKLPGVGEKSALRLAFHLLKYPGN-IEALSESLVQVKEKVRFCSLCFA 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC + RDA+ + VVE+ DL ALERS+A YHVL G+LSPL+ + P D+
Sbjct: 63 ITEDDPCWICSGE-RDAAALCVVEEPQDLLALERSRAFRGRYHVLQGALSPLNGVTPRDL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+E +RE++ A + ++EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y
Sbjct: 122 RIAELMQRLEGGGVREVLIATNFSVEGEATALYLTRMIKPLGIKVTRLAHGIPIGSDLEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 VDAATVQRAVEGRSEL 197
>gi|167623526|ref|YP_001673820.1| recombination protein RecR [Shewanella halifaxensis HAW-EB4]
gi|189029374|sp|B0TP04|RECR_SHEHH RecName: Full=Recombination protein recR
gi|167353548|gb|ABZ76161.1| recombination protein RecR [Shewanella halifaxensis HAW-EB4]
Length = 199
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA+++A + V C C
Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC+ +R S +I VVE AD+ A+E + Y VL G LSPLD +GPE+
Sbjct: 63 FTEETYCPICVSTKRGHSDIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + + ELI A + T+EG TAHYI D K ++ ++R+A+G+P+G EL+
Sbjct: 123 LGLALLEQHLASGDVSELILATNPTVEGDATAHYIADMAKRHELMVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R +
Sbjct: 183 YVDSTTLALSFNGRLPI 199
>gi|227824619|ref|ZP_03989451.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905118|gb|EEH91036.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 198
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + L + L ++PG G +SA R + H++ K + LA A+ + ++V LC+ C N+
Sbjct: 5 KPLARLHEQLRKLPGIGSKSALRLSYHVLDMKRSDVEALAAALVAVKDQVHLCTSCFNLC 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D++RD +I VVE+ D+ A+ER+K +YHVL G LSPLD +GP+ + I
Sbjct: 65 EGTRCEICEDEKRDHGLICVVEEPQDVAAMERTKGFEGVYHVLHGVLSPLDGVGPDQLKI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R++ + E+I A ++ +EG+ TA Y+ ++ + +K++R+A+G+PMG +L+Y D
Sbjct: 125 RELMRRLQDGSVHEVILATNSDVEGEATAAYLASLIRPLGIKVSRIAHGLPMGGDLEYAD 184
Query: 188 DGTIFEAIRSRTVL 201
+ T+++A+ +R L
Sbjct: 185 ELTLYKALENRREL 198
>gi|121533382|ref|ZP_01665210.1| recombination protein RecR [Thermosinus carboxydivorans Nor1]
gi|121307941|gb|EAX48855.1| recombination protein RecR [Thermosinus carboxydivorans Nor1]
Length = 171
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 110/171 (64%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
H+++ + LA+A+ + KV CS+C N+ DPC +C + RD +VI VVED
Sbjct: 1 MAYHVLEMDKDEAQALAQAILDAKEKVGYCSVCFNLTDCDPCQVCQAEGRDRTVICVVED 60
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150
D+ A+ER++ LYHVL G+LSPLD +GP+ + + L++R+ +RE+I A + +
Sbjct: 61 PRDVEAMERTREYRGLYHVLHGALSPLDGVGPDQLRLAELLQRLRQGDVREVIMATNPNV 120
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+ T+ +A+ +R L
Sbjct: 121 EGEATAMYIARLLKPLGVKVTRIAHGLPVGGDLEYADEVTLAKALENRREL 171
>gi|42527057|ref|NP_972155.1| recombination protein RecR [Treponema denticola ATCC 35405]
gi|73621527|sp|Q73MF9|RECR_TREDE RecName: Full=Recombination protein recR
gi|41817481|gb|AAS12066.1| recombination protein RecR [Treponema denticola ATCC 35405]
Length = 195
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 112/194 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
I+ +I +R+PG G +SA R HL+K+ LAEA++ ++ K+ C+ICG+
Sbjct: 2 NAIDAVIDSFSRLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEKIHPCTICGSYT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C+IC D+ RD + I VV D+ + L+HVLGG ++PL+ IGP+ + I
Sbjct: 62 EDEICSICADETRDRATICVVGFPQDVNTISSIPEYRGLFHVLGGLIAPLEGIGPDQLHI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI RI I E+I A + TIEG TTA YI L+ + V ITRLA G+P+G +L+Y D
Sbjct: 122 SELIRRIHEGGITEVILATNPTIEGDTTALYIQKILQDLPVNITRLASGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ ++ R
Sbjct: 182 RLTLARSLNGRIKF 195
>gi|183222802|ref|YP_001840798.1| recombination protein RecR [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912834|ref|YP_001964389.1| recombination protein RecR [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777510|gb|ABZ95811.1| Recombinational DNA repair protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167781224|gb|ABZ99522.1| Recombination protein RecR [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 202
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 117/199 (58%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ + + LI+ + +PG G +SA R H+++ + K+ C
Sbjct: 4 SHLSDPQFQKLIQAFSSLPGIGKKSATRIGFHILRMDPSTFQSWINHIEEAKTKLRFCDD 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CG + C+IC+ +RD ++ VVE D++ +E +K + YHVL G++SPLD IGP
Sbjct: 64 CGGLTEDSICSICLSDRRDNGILCVVEQPEDIFFIENTKEYSGKYHVLNGAISPLDGIGP 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
E + I+ L++R+++ I+E++ A + T+EG TA Y+ +K +++KITR+A+GI +G
Sbjct: 124 EQLRIKQLMQRLDIGNIKEVLIATNPTLEGDATASYLSTVIKPMEIKITRIAHGITIGGT 183
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D T+ +AI+SR L
Sbjct: 184 LEYSDQYTLGKAIKSRLTL 202
>gi|238751047|ref|ZP_04612543.1| hypothetical protein yrohd0001_1800 [Yersinia rohdei ATCC 43380]
gi|238710737|gb|EEQ02959.1| hypothetical protein yrohd0001_1800 [Yersinia rohdei ATCC 43380]
Length = 191
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ LA+++ +++ C+ C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQDRCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L +
Sbjct: 61 ICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E + I E+I A + T+EG TA+YI V TR+A+G+P+G EL+ +D T+
Sbjct: 121 RLETETISEVILATNPTVEGDATANYIGQMCGQYGVLATRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R +
Sbjct: 181 HSLAGRNPI 189
>gi|294085058|ref|YP_003551818.1| recombination protein RecR [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664633|gb|ADE39734.1| recombination protein RecR [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 197
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 101/193 (52%), Positives = 140/193 (72%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ENLI+ L R+PG GPRSARRA L L+K +++L+ PLA+ + +I V C CGN+DT
Sbjct: 4 SLENLIRRLGRLPGLGPRSARRAVLFLLKNRDRLMLPLAQELHDIARTVRPCVDCGNLDT 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC D +RD S I VVEDV DLWA+ER+ YHVLGG+LS LD GP+D+ I
Sbjct: 64 ADLCHICRDDRRDKSRICVVEDVGDLWAMERAAVFRGRYHVLGGTLSALDGRGPDDLAID 123
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R + ++ E+I A+SAT++GQTTAHYI +KL ++ +TRLA+G+P+G ELDYLDD
Sbjct: 124 RLLRRAQAGEVVEIILALSATVDGQTTAHYIAEKLAPSNLDVTRLAHGVPVGGELDYLDD 183
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+++R +
Sbjct: 184 GTLAQALKARAKM 196
>gi|293400032|ref|ZP_06644178.1| recombination protein RecR [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306432|gb|EFE47675.1| recombination protein RecR [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 196
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K+ E L++ ++PG G ++A R ++ E+ L +++A++ + + C +CG
Sbjct: 1 MYPKKFEALVESFRKLPGVGMKTAERYAFQTLEWDEETLNGFIQSLADMKDGLKKCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D R +I VV+ D+ A+E++K +YHVL G +S I PED
Sbjct: 61 NLAEGDLCDICKDTTRQRDIICVVQSPKDVIAMEKTKEYAGVYHVLNGVISTAKGILPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I+SL+ RI + +E+I A + T+EG+TTA Y+ L+ DV +TR+A+G+PMG LD
Sbjct: 121 INIESLLTRI-QEDTKEIIIATNPTVEGETTALYLSKLLESYDVTVTRIAHGLPMGGHLD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +AI R +
Sbjct: 180 YADELTLIKAIEGRKKM 196
>gi|53804578|ref|YP_113788.1| recombination protein RecR [Methylococcus capsulatus str. Bath]
gi|73621498|sp|Q609A9|RECR_METCA RecName: Full=Recombination protein recR
gi|53758339|gb|AAU92630.1| recombination protein RecR [Methylococcus capsulatus str. Bath]
Length = 198
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 114/193 (59%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI+ L +PG GP++A+R TLHL+++ G L+EA+ KV LC+ C +
Sbjct: 6 AIAELIEALRCLPGVGPKTAQRMTLHLLQRDRDAAGRLSEALRQALEKVGLCAQCRTLTE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C C RD S++ +VE A++ A+ RS L+ VL G LSPLD IGPE++G+
Sbjct: 66 HSLCEYCASPGRDRSLLCIVESPAEVLAISRSTGYKGLFFVLNGRLSPLDGIGPEELGLD 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ + ELI A + T+EG+ TAHY+ D + V+ TR+A+GIP G EL+Y+D
Sbjct: 126 VLEQRLKDDGVAELILATNTTVEGEATAHYLSDMARRHGVRTTRIAHGIPFGGELEYVDG 185
Query: 189 GTIFEAIRSRTVL 201
T+ A R
Sbjct: 186 ATLSHAFDGRKDF 198
>gi|329767044|ref|ZP_08258572.1| recombination protein recR [Gemella haemolysans M341]
gi|328837769|gb|EGF87394.1| recombination protein recR [Gemella haemolysans M341]
Length = 198
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 117/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K I +LI + +PG G ++A R H +K + + A+++ ++ K+ C +CG
Sbjct: 3 YPKPILDLIDSYSLLPGIGKKTAVRLAFHTLKMHDDDIKNFADSLVHLKEKLTNCEVCGR 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC D RD S+I VV + DL A+E + +YHVL G +SP+D IGP DI
Sbjct: 63 LSEDHVCDICSDAGRDKSMICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+SL ER + + ++E+I A +++ EG+ TA +I LK D+++TR+A GI GS+++Y
Sbjct: 123 NIKSLFERAQDETVKEIILATNSSPEGEGTASFISRYLKNTDIRVTRIAQGISFGSDIEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ AI R L
Sbjct: 183 VDEVTLSRAISGRIEL 198
>gi|269103100|ref|ZP_06155797.1| recombination protein RecR [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162998|gb|EEZ41494.1| recombination protein RecR [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 190
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ Q LAEA+ + ++ C C D CA
Sbjct: 1 MEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLAEALNHAMTEIGHCRDCRTFTEDDICA 60
Query: 74 ICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + ++ VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ +L
Sbjct: 61 ICDNPRRKENGIVCVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLEF 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R++ + I ELI A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLQNEAISELILATNPTVEGEATAHYIAELCQEYGVPASRIAHGVPVGGELELVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R L
Sbjct: 181 HSLAGRQKL 189
>gi|238795500|ref|ZP_04639015.1| hypothetical protein ymoll0001_10900 [Yersinia mollaretii ATCC
43969]
gi|238720619|gb|EEQ12420.1| hypothetical protein ymoll0001_10900 [Yersinia mollaretii ATCC
43969]
Length = 191
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ LA+++ +++ C+ C D C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQDRCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L +
Sbjct: 61 ICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLESETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R +
Sbjct: 181 HSLAGRNPI 189
>gi|160872916|ref|ZP_02063048.1| recombination protein RecR [Rickettsiella grylli]
gi|159121715|gb|EDP47053.1| recombination protein RecR [Rickettsiella grylli]
Length = 198
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG GP+SA+R HL++K LA+ + ++ C C N
Sbjct: 3 FSPLISQLISQFCCLPGVGPKSAQRMVFHLLEKARGDALTLAKMITQTVQEIGNCEHCRN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T CA+C + R+ ++ VVE D+ A+E++ + Y VL G LSPLD IGP+++
Sbjct: 63 LSETPICALCSNPNRERRLLCVVETPVDVLAIEQTGSYRGYYFVLMGRLSPLDGIGPKEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI I+RI + +E+I A + T+EG+ TAHY+ + +K +K++R+A+G+P+GSEL++
Sbjct: 123 GIHYFIQRINTQLPQEIILATNPTVEGEATAHYLTELIKQKGIKLSRIAHGVPLGSELEF 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ ++ SR +
Sbjct: 183 IDNHTLARSLTSRVTI 198
>gi|330502979|ref|YP_004379848.1| recombination protein RecR [Pseudomonas mendocina NK-01]
gi|328917265|gb|AEB58096.1| recombination protein RecR [Pseudomonas mendocina NK-01]
Length = 199
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 3 FSPLIRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRCRS 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C+D++RD SV+ VVE D+ A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEDEVCQLCLDERRDDSVLCVVEGPMDVHAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ERIE E+I A + T+EG+ TAHYI L G + +R+A+G+P+G EL+
Sbjct: 122 GIPELLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLVASRIAHGMPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRRPI 197
>gi|325954178|ref|YP_004237838.1| recombination protein recR [Weeksella virosa DSM 16922]
gi|323436796|gb|ADX67260.1| Recombination protein recR [Weeksella virosa DSM 16922]
Length = 205
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 115/196 (58%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +E + ++++PG G R+A R LH++ + LAEA+ ++ + C
Sbjct: 2 SNYPSKVLERAVNEMSQLPGIGKRTALRLVLHMLNRPHTQTLRLAEALTHLVEDIQYCET 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + T C IC + RD S+I VVEDV D+ A+E + +YHVLGG +SP++ IGP
Sbjct: 62 CHTLSDTPICEICSNPLRDHSIICVVEDVRDVMAIENTGQYRGVYHVLGGRISPMEGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ I SL++R + +E+IFA+S+T+EG TT Y+ +LK + T +A GI +G E
Sbjct: 122 SQLKIDSLVKRAAEESTKEIIFALSSTMEGDTTVFYLFKQLKDFPLFYTTIARGIGVGDE 181
Query: 183 LDYLDDGTIFEAIRSR 198
L+Y D+ T+ +I +R
Sbjct: 182 LEYADEATLIRSIENR 197
>gi|207723142|ref|YP_002253541.1| recombination protein RecR [Ralstonia solanacearum MolK2]
gi|207743466|ref|YP_002259858.1| recombination protein recr [Ralstonia solanacearum IPO1609]
gi|206588336|emb|CAQ35299.1| recombination protein recr [Ralstonia solanacearum MolK2]
gi|206594863|emb|CAQ61790.1| recombination protein recr [Ralstonia solanacearum IPO1609]
Length = 207
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|288940168|ref|YP_003442408.1| recombination protein RecR [Allochromatium vinosum DSM 180]
gi|288895540|gb|ADC61376.1| recombination protein RecR [Allochromatium vinosum DSM 180]
Length = 198
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 116/192 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ LI+ L +PG GP+SARR HL+++ + LA MA + CS C +
Sbjct: 7 LNQLIEALRCLPGVGPKSARRIAFHLLERDREGGARLARVMAEAMVAIRRCSRCRTLTEH 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CA+C + RD S++ +VE +++ A+E++ Y VLGG LSPLD IGP+++G+
Sbjct: 67 EVCALCANPNRDGSLLCIVEQPSEVVAIEQATDYRGRYFVLGGRLSPLDGIGPDELGLDV 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ + I E+I AIS T+EG TA +I D+ V++TR+A+G+P+G EL+Y+D G
Sbjct: 127 LEARLRDESIAEVILAISPTVEGGATAQFIADRAARHGVRVTRIAHGVPLGGELEYVDGG 186
Query: 190 TIFEAIRSRTVL 201
T+ A R L
Sbjct: 187 TLALAFSGRHAL 198
>gi|331005545|ref|ZP_08328919.1| Recombination protein RecR [gamma proteobacterium IMCC1989]
gi|330420647|gb|EGG94939.1| Recombination protein RecR [gamma proteobacterium IMCC1989]
Length = 218
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 119/218 (54%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I+ LI L +PG G +SA+R LHL+++ + G L A+ KV C C
Sbjct: 1 MFSPLIDELIHSLCCLPGVGRKSAQRMALHLLERDPEGAGRLVGALGTAIEKVGRCLHCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC +Q+R+ ++ VVE AD+ A+E+S Y VL G LSP+D IGP++
Sbjct: 61 ILTEQPVCYICSNQRRNTGLLCVVETPADVVAIEQSGTYQGKYFVLNGRLSPIDGIGPKE 120
Query: 125 IGIQSLIERIEVKK---------------------IRELIFAISATIEGQTTAHYIMDKL 163
+G+ L +R+ ++ + ELI A + T+EG+ TA+YI ++
Sbjct: 121 LGLPQLFQRLRQEQQVTSQADEAEVEVEKDNANAPVTELILATNPTVEGEATAYYIAEQA 180
Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+ + ++R+A+G+P+G EL+Y+D GT+ A SR +
Sbjct: 181 RQCGITVSRIAHGVPLGGELEYIDGGTLTHAFSSRRSI 218
>gi|299067245|emb|CBJ38442.1| Recombination protein recR [Ralstonia solanacearum CMR15]
Length = 206
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 7 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDA+V+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQDVCETCLDPRRDAAVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|221067922|ref|ZP_03544027.1| recombination protein RecR [Comamonas testosteroni KF-1]
gi|220712945|gb|EED68313.1| recombination protein RecR [Comamonas testosteroni KF-1]
Length = 196
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 119/192 (61%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C
Sbjct: 5 QSLDALIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D RD + + VVE ADL A+ER++A Y+VL G LSPLD +GP++IG+
Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTEAYQGYYYVLMGRLSPLDGVGPKEIGM 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER ++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D
Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAISEALKSRGILVTRLARGVPIGSELEYVD 184
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 185 LGTIAHALVDRR 196
>gi|163750247|ref|ZP_02157489.1| recombination protein RecR [Shewanella benthica KT99]
gi|161330103|gb|EDQ01087.1| recombination protein RecR [Shewanella benthica KT99]
Length = 199
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + L++A++ + V C C
Sbjct: 3 FSPLVDELIQTLKCLPGVGPKSAQRMAFQLLERDRKAGQSLSQALSKAMSDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R + VI VVE AD+ A+E + Y VL G LSPLD +GP++
Sbjct: 63 FTEEVHCPICASHKRGLSQVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L E + ++ ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+
Sbjct: 123 LGLALLEEHLASGEVAELILATNPTVEGDATAHFIADIAKSHNVIVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|160914823|ref|ZP_02077037.1| hypothetical protein EUBDOL_00831 [Eubacterium dolichum DSM 3991]
gi|158433363|gb|EDP11652.1| hypothetical protein EUBDOL_00831 [Eubacterium dolichum DSM 3991]
Length = 196
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K E L++ +PG G ++A R ++ + + + A+ + + + CS+CG
Sbjct: 1 MYPKRFEQLVEAYRHLPGVGLKTAERYAFETIEWDLETIDEIITALVEVRDGIKKCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D R+ +I VV+ D+ A+E++K + +YHVL G +S I PED
Sbjct: 61 NLSEDNTCDICKDTSRNHEMICVVQSAKDVIAMEKTKEYHGVYHVLNGVISTSKGILPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I SL+ERI+ ++E+I A + T+EG+TTA Y+ L+ D+K+TR+A+G+PMG LD
Sbjct: 121 INIDSLLERIDDH-VKEIILATNPTVEGETTAMYLSKLLEPYDIKVTRIAHGLPMGGHLD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +AI +R +
Sbjct: 180 YADELTLIKAIENRKKM 196
>gi|330718538|ref|ZP_08313138.1| recombination protein RecR [Leuconostoc fallax KCTC 3537]
Length = 201
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R + + + + ++++ + + C CG
Sbjct: 3 YPEPIAKLIDNYTKLPGIGPKTATRLAFYTLGMDNEDVESFSKSLISAKKDLTFCDTCGM 62
Query: 66 VDTTD--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D PC IC D+ R+ + VVE+ D+ A+E ++ + LYHVL G +SP GPE
Sbjct: 63 ITEKDMNPCIICRDKSRNQGTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 122
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SL+ R+ ++I+E+I +A EG+ TA Y+ LK +K+TRLA+G+ +GS+
Sbjct: 123 DINLPSLVRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIKVTRLAHGLSVGSD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D+ T+ +A++ RT L
Sbjct: 183 IDYADELTLIKAVQGRTEL 201
>gi|227874528|ref|ZP_03992694.1| recombination protein RecR [Oribacterium sinus F0268]
gi|227839624|gb|EEJ50088.1| recombination protein RecR [Oribacterium sinus F0268]
Length = 198
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K+++ L++ L+R+PG GP+SA+R L+ +++ LA+++ + + C C
Sbjct: 2 EYFSKDMDRLVQELSRLPGIGPKSAQRLAYFLINGEKEQAYALADSIKKARDSIRYCKCC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C +C +R+ I+VVE+ D+ A ER +YHVL G++SPL IGPE
Sbjct: 62 CTLTDGELCPVCSSAERNHKQIMVVENPRDMSAYERVGKYQGVYHVLHGAISPLLGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI ++ L+ R+ ++ E+I A ++++EG+TTA YI +K + V ++R+A G+P+G ++
Sbjct: 122 DIRLKELMVRL-QGEVEEVIIATNSSLEGETTASYITKLIKPLGVPLSRIASGVPVGGDI 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D+ T+ A+ R L
Sbjct: 181 ENIDEITLLRALDGRVSL 198
>gi|298208096|ref|YP_003716275.1| recombination protein RecR [Croceibacter atlanticus HTCC2559]
gi|83850737|gb|EAP88605.1| recombination protein RecR [Croceibacter atlanticus HTCC2559]
Length = 205
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 123/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E ++ ++++PG G R+A R LHL+K+ E LA+A+ ++ ++ C+ C
Sbjct: 2 DFSSKYLEQAVQEVSQLPGIGKRTALRLVLHLLKQPEDQTVSLAKALVDVKTQINFCTNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + +R++ + VVED+ D+ A+E + YHVLGG +SP+D +GP
Sbjct: 62 HNISDHKLCEICANPKRESQYVCVVEDIRDVMAIENTSQYRGHYHVLGGKISPMDGVGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I +L+++ + K+ E+IFA+S+T+EG TT YI +L+G +K + +A GI +G EL
Sbjct: 122 QLNISTLVDKAKAGKVDEIIFALSSTLEGDTTNFYIFKQLEGTGIKTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSILNRIPF 199
>gi|312887351|ref|ZP_07746952.1| recombination protein RecR [Mucilaginibacter paludis DSM 18603]
gi|311300154|gb|EFQ77222.1| recombination protein RecR [Mucilaginibacter paludis DSM 18603]
Length = 205
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 125/197 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E + +++PG G ++A R LHL+ ++++ + ++A++ + N++ C +C
Sbjct: 2 NFSSKLLEAAVAEFSKLPGVGQKTALRLVLHLLNQEKEEVESFSKAISKLRNEIQFCEVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +RD S++ VVED D+ A+E + N LYHVLG +SP+D IGP
Sbjct: 62 HNISDLPVCEICSAPKRDRSLVCVVEDTRDVMAVENTSQYNGLYHVLGALISPMDGIGPA 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ + SLIER+ +++E+IFA+SAT+EG TT Y+ +LK ++ I+ +A GI G EL
Sbjct: 122 DLEVDSLIERLRTDEVKEVIFALSATMEGDTTIFYLHKRLKEFNIHISTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y+D+ T+ +I +R
Sbjct: 182 EYVDEITLGRSITTRVP 198
>gi|148556943|ref|YP_001264525.1| recombination protein RecR [Sphingomonas wittichii RW1]
gi|166221969|sp|A5VDM1|RECR_SPHWW RecName: Full=Recombination protein recR
gi|148502133|gb|ABQ70387.1| recombination protein RecR [Sphingomonas wittichii RW1]
Length = 198
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 107/196 (54%), Positives = 146/196 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ EIE L + LA++PG GPRSARRA LHL+KK+E LGPL A+ + +K+ C +CG
Sbjct: 1 MSSPEIETLTQALAKLPGLGPRSARRAVLHLLKKREAALGPLLRALEAVNDKLTSCHVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA ++ VVE+VADLWAL+RS+ +HVLGG LS L+ I PED
Sbjct: 61 NVDTGDPCGICADPRRDARMLCVVEEVADLWALDRSRLFPGRFHVLGGRLSALEGIRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I LI RI I E++ A++AT+EGQTTAHYI D+L+ V++T+LA+G+P+G ELD
Sbjct: 121 LSIDLLIGRIAAGGIDEVVLAMNATLEGQTTAHYIADRLESFPVRLTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|331694241|ref|YP_004330480.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190]
gi|326948930|gb|AEA22627.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190]
Length = 205
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + L E + + V C +C
Sbjct: 1 MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADVSRLQEVLQRVKQGVRFCEVCS 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C C D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL IGP+
Sbjct: 61 NVSENERCRFCTDARRDPTVVCVVEEPKDVLAVERTREFKGRYHVLGGALDPLGGIGPDS 120
Query: 125 IGIQSLIER-------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYG 176
+ I+ L+ R + +I E+I A EG+ TA Y++ L+ + ++R A G
Sbjct: 121 LKIRELLARLGGTGPASDETEIAEVIIATDPNTEGEATATYLVRLLRDFPGLTVSRPAAG 180
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+PMG +L++ D+ T+ A+ R L
Sbjct: 181 LPMGGDLEFADELTLGRALSGRRAL 205
>gi|328946986|ref|YP_004364323.1| Recombination protein recR [Treponema succinifaciens DSM 2489]
gi|328447310|gb|AEB13026.1| Recombination protein recR [Treponema succinifaciens DSM 2489]
Length = 195
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 112/194 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L + +R+PG G +SA R HL+K + + ++ ++ CSICG
Sbjct: 2 NALDELTESFSRLPGIGKKSAARIASHLLKTDSSFNIRFSNQILSLQERIKPCSICGAWT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC IC D RD +++ VVE D+ +E S + L+HVLGG +SPL+ I P+ + I
Sbjct: 62 EEDPCPICSDIARDKTILCVVEQPQDVATIESSHEFHGLFHVLGGVISPLEGITPDKLRI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ER+++ I+E+I A + T+EG TTA +I L+ V +TRLA G+P G +L+Y D
Sbjct: 122 SQLLERVKLGVIKEVIIATNPTVEGDTTALFIQRVLQDTQVVVTRLASGLPAGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ + + R +
Sbjct: 182 RLTLARSFQGRVKI 195
>gi|305667757|ref|YP_003864044.1| recombination protein RecR [Maribacter sp. HTCC2170]
gi|88707594|gb|EAQ99836.1| recombination protein RecR [Maribacter sp. HTCC2170]
Length = 206
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 128/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++++PG G R+A R LHL+K+ + L+ A+ ++ N V C+ C
Sbjct: 2 DFSSKLLENAVYEMSQLPGIGKRTALRLVLHLLKQPTEQTMKLSVALQDLRNTVKFCANC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + +RD S++ VVED+ D+ A+E + LYHVLGG +SP++ +GP+
Sbjct: 62 HNISDVELCEICANPKRDESIVCVVEDIRDVMAIENTGQFKGLYHVLGGKISPMEGVGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+ + + KI+E+IFA+S+T+EG TT YI +L+G+D+ + +A GI +G EL
Sbjct: 122 ELTISSLVSKAKEGKIKEMIFALSSTMEGDTTNFYIYKQLQGLDIATSTIARGIAIGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSILNRIPF 199
>gi|153001130|ref|YP_001366811.1| recombination protein RecR [Shewanella baltica OS185]
gi|160875800|ref|YP_001555116.1| recombination protein RecR [Shewanella baltica OS195]
gi|217972948|ref|YP_002357699.1| recombination protein RecR [Shewanella baltica OS223]
gi|304409213|ref|ZP_07390834.1| recombination protein RecR [Shewanella baltica OS183]
gi|307303216|ref|ZP_07582971.1| recombination protein RecR [Shewanella baltica BA175]
gi|166221963|sp|A6WPK9|RECR_SHEB8 RecName: Full=Recombination protein recR
gi|189029373|sp|A9L594|RECR_SHEB9 RecName: Full=Recombination protein recR
gi|254790782|sp|B8E703|RECR_SHEB2 RecName: Full=Recombination protein recR
gi|151365748|gb|ABS08748.1| recombination protein RecR [Shewanella baltica OS185]
gi|160861322|gb|ABX49856.1| recombination protein RecR [Shewanella baltica OS195]
gi|217498083|gb|ACK46276.1| recombination protein RecR [Shewanella baltica OS223]
gi|304353034|gb|EFM17431.1| recombination protein RecR [Shewanella baltica OS183]
gi|306913576|gb|EFN43998.1| recombination protein RecR [Shewanella baltica BA175]
gi|315267990|gb|ADT94843.1| recombination protein RecR [Shewanella baltica OS678]
Length = 199
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+
Sbjct: 63 YTEETLCPICASHKRGTSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|238899121|ref|YP_002924803.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259563699|sp|C4K7W2|RECR_HAMD5 RecName: Full=Recombination protein recR
gi|229466881|gb|ACQ68655.1| gap repair protein with type I DNA topoisomerase domain, part of
RecFOR complex that targets RecA to ssDNA-dsDNA junction
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 202
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE L++ L +PG GP+SA+R +L++ LAE++ +++ C +C
Sbjct: 7 IEALMESLRHLPGVGPKSAQRMAFYLLQSDRSKGIRLAESLLKAMSEIGHCGVCRTFTEQ 66
Query: 70 DPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC + R+ I VVE +D+ A+E++ + Y VL G LSPLD IGP+DIG+
Sbjct: 67 PCCDICSNVYREKMGQICVVESPSDICAIEQTGQFSGRYFVLMGRLSPLDGIGPDDIGLP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R+ + I+E+I A++ T+EG+ T++YI + + T++A+G+P+G +L+ +D+
Sbjct: 127 LLEHRLSTEPIKEVILAMNPTVEGEATSNYIAQMCEEYGISTTKIAHGVPIGGDLEMVDE 186
Query: 189 GTIFEAIRSRTVL 201
T+ A+ R +
Sbjct: 187 TTLSHALVGRRPM 199
>gi|289209014|ref|YP_003461080.1| recombination protein RecR [Thioalkalivibrio sp. K90mix]
gi|288944645|gb|ADC72344.1| recombination protein RecR [Thioalkalivibrio sp. K90mix]
Length = 196
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 114/192 (59%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
E++ L++ L +PG G +SARR LHL+++ LA A+ +V C +C + T
Sbjct: 4 ELDELVQALRCLPGVGAKSARRMALHLLERDRDGARRLARAVDQAVERVGHCQVCRTLTT 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C+ C D +RD VI VVE D+ A+E + +HVL G LSPLD IGPE++G+
Sbjct: 64 AEVCSRCADPERDPGVICVVESPGDVMAIESATDFTGRFHVLLGRLSPLDGIGPEELGLD 123
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L R++ +RELI A + ++EG+ TAHY+ + ++ TR+A GIP G EL+Y+D
Sbjct: 124 RLEARLQEDSVRELILATNTSVEGEVTAHYLAEMAARHGIRATRIAQGIPTGGELEYIDA 183
Query: 189 GTIFEAIRSRTV 200
GT+ A+ R
Sbjct: 184 GTLAHALSGRRE 195
>gi|77458035|ref|YP_347540.1| recombination protein RecR [Pseudomonas fluorescens Pf0-1]
gi|123605283|sp|Q3KFA5|RECR_PSEPF RecName: Full=Recombination protein recR
gi|77382038|gb|ABA73551.1| recombination protein [Pseudomonas fluorescens Pf0-1]
Length = 200
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C C
Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEDDLCPQCADTRRDDTLLCVVEGPMDVYAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L+ + +R+A+G+P+G EL+
Sbjct: 122 GIPQLMARIEEAGTFTEVILATNPTVEGEATAHYIAQLLQNKGLIASRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|313892542|ref|ZP_07826129.1| recombination protein RecR [Dialister microaerophilus UPII 345-E]
gi|313118939|gb|EFR42144.1| recombination protein RecR [Dialister microaerophilus UPII 345-E]
Length = 196
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/192 (39%), Positives = 120/192 (62%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E + + ++PG G +SA+R ++ + ++ + + + N VC CSIC N+ T+
Sbjct: 5 LEEVAEQFCKLPGIGVKSAKRLAYFMLMRPQKDIDTFLKTIENAKKSVCYCSICCNLATS 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
DPC+IC D +R++S++ +VE+ D+ A+E+S N LYHVL G LSPLD IGPE++ I+
Sbjct: 65 DPCSICTDSKRNSSLLCIVENPQDVHAMEQSHEYNGLYHVLHGVLSPLDGIGPENLKIKE 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ I E+I A EG+ TA+YI D +K +KITR A G+P GS + Y D
Sbjct: 125 LLTRLKDSNINEVIIATDPDTEGEATAYYIADLIKPSGIKITRPARGLPAGSNIGYADSI 184
Query: 190 TIFEAIRSRTVL 201
T+ A+ +R +
Sbjct: 185 TLANAVENRKEI 196
>gi|70729289|ref|YP_259026.1| recombination protein RecR [Pseudomonas fluorescens Pf-5]
gi|123656866|sp|Q4KFF7|RECR_PSEF5 RecName: Full=Recombination protein recR
gi|68343588|gb|AAY91194.1| recombination protein RecR [Pseudomonas fluorescens Pf-5]
Length = 200
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C C
Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGLRLAQALSQAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEDELCPQCADPRRDDTLLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 122 GIPQLLARIEEQGSFSEVILATNPTVEGEATAHYIAQLLTNKGLITSRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|24373578|ref|NP_717621.1| recombination protein RecR [Shewanella oneidensis MR-1]
gi|38372488|sp|Q8EFF8|RECR_SHEON RecName: Full=Recombination protein recR
gi|24347900|gb|AAN55065.1|AE015643_12 recombination protein RecR [Shewanella oneidensis MR-1]
Length = 199
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C
Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLAAALSSAMSDIGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+
Sbjct: 63 YTEETLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVLISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRIPL 199
>gi|29653995|ref|NP_819687.1| recombination protein RecR [Coxiella burnetii RSA 493]
gi|153209000|ref|ZP_01947194.1| recombination protein RecR [Coxiella burnetii 'MSU Goat Q177']
gi|154706620|ref|YP_001424073.1| recombination protein RecR [Coxiella burnetii Dugway 5J108-111]
gi|161831096|ref|YP_001596583.1| recombination protein RecR [Coxiella burnetii RSA 331]
gi|165920274|ref|ZP_02219546.1| recombination protein RecR [Coxiella burnetii RSA 334]
gi|212219111|ref|YP_002305898.1| recombination protein RecR [Coxiella burnetii CbuK_Q154]
gi|73621482|sp|Q83DP0|RECR_COXBU RecName: Full=Recombination protein recR
gi|29541258|gb|AAO90201.1| recombination protein [Coxiella burnetii RSA 493]
gi|120575537|gb|EAX32161.1| recombination protein RecR [Coxiella burnetii 'MSU Goat Q177']
gi|154355906|gb|ABS77368.1| recombination protein [Coxiella burnetii Dugway 5J108-111]
gi|161762963|gb|ABX78605.1| recombination protein RecR [Coxiella burnetii RSA 331]
gi|165916830|gb|EDR35434.1| recombination protein RecR [Coxiella burnetii RSA 334]
gi|212013373|gb|ACJ20753.1| recombination protein [Coxiella burnetii CbuK_Q154]
Length = 201
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 77/195 (39%), Positives = 125/195 (64%), Gaps = 1/195 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKK-EQLLGPLAEAMANIYNKVCLCSIC 63
+ + LI+ L +PG GP+SA+R HL+ K + L++A+ + +V C +C
Sbjct: 1 MFSPLTKQLIEALQCLPGIGPKSAQRMAFHLLAKSGQAKGLALSDALQSAIRQVGECKLC 60
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
C IC + +RD++++ VVE AD+ A+E+++ + Y VL G LSPLD IGP+
Sbjct: 61 QIYTEQPLCNICNNPKRDSTLLCVVESPADVVAIEQTQIYSGRYFVLHGHLSPLDGIGPQ 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+IGI +L++R+ + I+ELI A +AT+EG+ TAHY+ + + +K +R+A+G+PMG EL
Sbjct: 121 EIGIPALLDRLRNETIKELIIATNATMEGKATAHYVANHIDHTKIKCSRIAHGVPMGGEL 180
Query: 184 DYLDDGTIFEAIRSR 198
+YLD GT+ A+ SR
Sbjct: 181 EYLDGGTLIHALHSR 195
>gi|322435539|ref|YP_004217751.1| recombination protein RecR [Acidobacterium sp. MP5ACTX9]
gi|321163266|gb|ADW68971.1| recombination protein RecR [Acidobacterium sp. MP5ACTX9]
Length = 200
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 73/203 (35%), Positives = 123/203 (60%), Gaps = 5/203 (2%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ + + LI L ++PG G ++A+R H+++ + LA+A+ I + LC
Sbjct: 1 MTQRFA-EPMARLIDELRKLPGIGTKTAQRLAFHVLRSPGEDADALADAIREIKKHLRLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C N+ DPC C + R +I VVE+ ++ +ER+++ N +YHVL G+LSP+ +
Sbjct: 60 SVCNNITDVDPCHYCSNPVRSHRLICVVEEPTNIATVERTRSYNGVYHVLHGTLSPIGGV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIP 178
GPE + I++L+ R+E + E+I A S TIEG+ TA YI +L+ VK+TR+A G+P
Sbjct: 120 GPEQLRIRNLLTRLED--VDEVILATSPTIEGEATAGYIAGELRRVKSGVKVTRIATGVP 177
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
GS+++Y D+ T+ A+ R
Sbjct: 178 AGSDIEYADEVTMTRAMEGRREF 200
>gi|325919109|ref|ZP_08181168.1| DNA replication and repair protein RecR [Xanthomonas gardneri ATCC
19865]
gi|325550418|gb|EGD21213.1| DNA replication and repair protein RecR [Xanthomonas gardneri ATCC
19865]
Length = 198
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI+ +PG G +SA+R H+++++ + LA +AN KV C+ C
Sbjct: 1 MSSSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCAQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ ++ CAIC RD + VVE AD A+E + LY +L G LSPLD IGP +
Sbjct: 61 DFTESEICAICASASRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+
Sbjct: 121 LGLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D GT+ A +R+
Sbjct: 181 YVDRGTLSHAFGTRSE 196
>gi|89890633|ref|ZP_01202143.1| recombination DNA repair protein RecR [Flavobacteria bacterium
BBFL7]
gi|89517548|gb|EAS20205.1| recombination DNA repair protein RecR [Flavobacteria bacterium
BBFL7]
Length = 205
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 123/197 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E + ++++PG G R+A R LHL+++ L++A+ N+ + + C C
Sbjct: 2 NFSSKILEEAVNQVSQLPGIGKRTALRLVLHLMRQPASQTDALSQALTNLRHDLKFCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
NV D C IC RD +++ VVED+ D+ A+E + LYHVLGG +SP+D IGP+
Sbjct: 62 HNVSDVDICEICSSHNRDKTIVCVVEDIRDVMAIENTSQYRGLYHVLGGKISPMDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+SLIERI+ ++ELIFA+S TIEG TT YI +L G++V + +A GI +G EL
Sbjct: 122 DLNIKSLIERIQNDGVQELIFALSPTIEGDTTNFYIFKQLNGLEVNTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
++ D+ T+ +I R
Sbjct: 182 EFADEVTLGRSILHRVP 198
>gi|126174785|ref|YP_001050934.1| recombination protein RecR [Shewanella baltica OS155]
gi|166221962|sp|A3D5Q2|RECR_SHEB5 RecName: Full=Recombination protein recR
gi|125997990|gb|ABN62065.1| recombination protein RecR [Shewanella baltica OS155]
Length = 199
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C
Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+
Sbjct: 63 YTEETLCPICTSHKRGTSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRLPL 199
>gi|325003633|ref|ZP_08124745.1| recombination protein RecR [Pseudonocardia sp. P1]
Length = 205
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 114/205 (55%), Gaps = 8/205 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L R+PG GP+SA+R HL+ + L E + + V C +CG
Sbjct: 1 MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQEVLQTVKQGVAFCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C C D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+
Sbjct: 61 NVSSDTRCRYCSDARRDPALLCVVEEPKDVLAVERTREFKGRYHVLGGALDPLAGVGPDT 120
Query: 125 IGIQSLIER-------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYG 176
+ I+ L+ R + I E+I A EG+ TA Y++ L+ + +TRLA G
Sbjct: 121 LRIRELLARLGGTGPAQDETSISEVIIATDPNTEGEATATYLVRLLRDFPGLTVTRLASG 180
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+PMG +L++ D+ T+ A+ R L
Sbjct: 181 LPMGGDLEFADEMTLGRALAGRRAL 205
>gi|315224197|ref|ZP_07866037.1| recombination protein R [Capnocytophaga ochracea F0287]
gi|314945930|gb|EFS97939.1| recombination protein R [Capnocytophaga ochracea F0287]
Length = 206
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + +A++P G R+A R LHL+K+ E+ LA+A+ + + C C
Sbjct: 2 DFSSKLLENAVYEIAQLPSIGKRTALRLALHLLKQPEEQSLQLAQAIVALRTHIQYCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC + RD V+ VVED D+ A+E + YHVLGG +SP+D I P
Sbjct: 62 HNISDVDLCEICANPMRDTGVVCVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SLIE+++ K+ ELI A+S T+EG TT YI +++ + I+ +A GI +G EL
Sbjct: 122 NLYIASLIEKVKTGKVTELILALSNTMEGDTTNFYIYKQVEPYHITISTIARGIAVGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYTDEVTLGRSITQRIPF 199
>gi|229591980|ref|YP_002874099.1| recombination protein RecR [Pseudomonas fluorescens SBW25]
gi|259563703|sp|C3JXP7|RECR_PSEFS RecName: Full=Recombination protein recR
gi|229363846|emb|CAY51305.1| recombination protein [Pseudomonas fluorescens SBW25]
Length = 200
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C C
Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMTGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 122 GIPQLVARIEEQGTFTEVILATNPTVEGEATAHYIAQLLTNKGLITSRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|194364637|ref|YP_002027247.1| recombination protein RecR [Stenotrophomonas maltophilia R551-3]
gi|194347441|gb|ACF50564.1| recombination protein RecR [Stenotrophomonas maltophilia R551-3]
Length = 199
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI L +PG G ++A+R HL++++ + LAEA++ ++ C+ C
Sbjct: 1 MSAPLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAEALSLAVERIGHCAQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP +
Sbjct: 61 DFSETELCPTCANSSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G++ L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+
Sbjct: 121 LGLEQLERRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ A +R+
Sbjct: 181 YVDRGTLSHAFGTRSEF 197
>gi|91792785|ref|YP_562436.1| recombination protein RecR [Shewanella denitrificans OS217]
gi|123356908|sp|Q12PB3|RECR_SHEDO RecName: Full=Recombination protein recR
gi|91714787|gb|ABE54713.1| recombination protein RecR [Shewanella denitrificans OS217]
Length = 199
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R +L+++ ++ LAE++ N V C C
Sbjct: 3 FSPLVDELIQALKGLPGVGPKSAQRMAFNLLERDRKVGLKLAESLKNAMTDVGHCQSCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R AS VI VVE AD+ A+E N Y VL G LSPLD +GPE+
Sbjct: 63 FTEQSLCPICASHKRGASGVICVVETPADVLAIEAGGHFNGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L + ++ + ELI A + T+EG TAH+I D + V I+R+A+G+P+G EL+
Sbjct: 123 LGLSLLEQHLQTLDVTELILATNPTVEGDATAHFIADMARRHKVIISRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R L
Sbjct: 183 YVDSTTLALSFNGRIAL 199
>gi|313673334|ref|YP_004051445.1| DNA replication and repair protein recr [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940090|gb|ADR19282.1| DNA replication and repair protein RecR [Calditerrivibrio
nitroreducens DSM 19672]
Length = 200
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I K + IK L+++PG G ++A R ++ L+K ++ + +A A+ ++ C CG
Sbjct: 2 IYSKSFDRCIKELSKLPGIGKKTALRLSMQLLKMNQKDVEDIANAIIDLKKNTKFCIRCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC D RD +I VVE+ D++ +E S N +YHVLGG L+PLD I P+D
Sbjct: 62 AMAEGEVCPICTDNNRDKQIICVVEEAKDVFLIEVSGKYNGVYHVLGGRLAPLDGINPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSEL 183
+ I+ L+ERI +++E+I A + +EG TTA ++ + K D+K+TR+A G+P+G L
Sbjct: 122 LRIKELLERIREDQVKEVILATNPDVEGDTTAIFLKKLISKNFDIKVTRIATGVPIGGYL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ TI +++ +R +
Sbjct: 182 EYTDEITILKSLENRREM 199
>gi|167034827|ref|YP_001670058.1| recombination protein RecR [Pseudomonas putida GB-1]
gi|189029368|sp|B0KPW7|RECR_PSEPG RecName: Full=Recombination protein recR
gi|166861315|gb|ABY99722.1| recombination protein RecR [Pseudomonas putida GB-1]
Length = 200
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C
Sbjct: 3 FSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEQELCPQCADTRRDDTQLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ RIE E+I A + T+EG+ TAHYI L + TR+A+G+P+G EL+
Sbjct: 122 GIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLAATRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ AI R +
Sbjct: 182 LVDGGTLAHAIAGRRPI 198
>gi|325972847|ref|YP_004249038.1| recombination protein recR [Spirochaeta sp. Buddy]
gi|324028085|gb|ADY14844.1| Recombination protein recR [Spirochaeta sp. Buddy]
Length = 196
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 1/194 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ENLI+ L+R+PG GP+SA R HL+K + LA+A+A I +K+ CSICG+
Sbjct: 3 ALENLIQTLSRLPGIGPKSASRLAYHLIKTDKLYNSTLADAIATIQDKIFPCSICGSFTE 62
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC +C D RD + + VVE D+ L+ S A N LYHVLGG++SPLD IGPE +
Sbjct: 63 YDPCPMCGDTSRDRTQLCVVEQPQDVLTLQSSGAYNGLYHVLGGAISPLDGIGPEHLSFS 122
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187
L++RI+ ELI A + T EG TTA Y+ LK ++ ITRLA G+P+G +L+Y D
Sbjct: 123 KLVKRIDEGGFTELIIATNPTEEGDTTALYLRHILKNHEELSITRLASGLPIGGDLEYAD 182
Query: 188 DGTIFEAIRSRTVL 201
T+ ++R R
Sbjct: 183 RITLARSLRGRVRF 196
>gi|225020186|ref|ZP_03709378.1| hypothetical protein CORMATOL_00188 [Corynebacterium matruchotii
ATCC 33806]
gi|305680112|ref|ZP_07402922.1| recombination protein RecR [Corynebacterium matruchotii ATCC 14266]
gi|224946930|gb|EEG28139.1| hypothetical protein CORMATOL_00188 [Corynebacterium matruchotii
ATCC 33806]
gi|305660732|gb|EFM50229.1| recombination protein RecR [Corynebacterium matruchotii ATCC 14266]
Length = 218
Score = 274 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R HL+ + L A+ + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLHVDPIDITRLQAALGAVQQGVSFCRICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D RD S I VVE+ D+ LER+ N YHVLGG+L PL+ IGP++
Sbjct: 61 NISRDEVCRICADSGRDRSTICVVEEPKDIQVLERTGEFNGRYHVLGGALDPLNSIGPKE 120
Query: 125 IGIQSLIERIE--------------------VKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++RI +I E+I A EG+ TA Y+ LK
Sbjct: 121 LNITALLQRIGGVLPDRELADSTPEQPLFDTTPEITEVILATDPNTEGEATASYLARLLK 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+ ++RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 181 DFPGLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL 218
>gi|34497067|ref|NP_901282.1| recombination protein RecR [Chromobacterium violaceum ATCC 12472]
gi|73621478|sp|Q7NXL4|RECR_CHRVO RecName: Full=Recombination protein recR
gi|34102924|gb|AAQ59288.1| DNA repair DNA recombination zinc-finger protein [Chromobacterium
violaceum ATCC 12472]
Length = 198
Score = 274 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 112/194 (57%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E LI L +PG GP++A+R HL+++ +Q LA A+ ++ C C
Sbjct: 3 NPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ CAIC D+ R + +VE ADL LE++K + LY VL G +SPLD IGP+D+
Sbjct: 63 FSEAELCAICADETRRRDQLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPKDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R ++ E++ A + T EG+ T+H + + K + +TR+A G+P+G EL+Y
Sbjct: 123 HLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELFKERGLTVTRIARGMPVGGELEY 182
Query: 186 LDDGTIFEAIRSRT 199
+D GT+ +A+ R
Sbjct: 183 VDLGTLAQAVYERR 196
>gi|156742263|ref|YP_001432392.1| recombination protein RecR [Roseiflexus castenholzii DSM 13941]
gi|189029370|sp|A7NFA0|RECR_ROSCS RecName: Full=Recombination protein recR
gi|156233591|gb|ABU58374.1| recombination protein RecR [Roseiflexus castenholzii DSM 13941]
Length = 205
Score = 274 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 117/198 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I + LI+ L+R+PG GP++A R T L++ ++L LA A+ + +V LCS C
Sbjct: 8 QILPTPVIRLIEELSRLPGVGPKTASRLTFFLLRAPDELPRALANALIGLKQQVQLCSRC 67
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D CAIC + RD ++ VVE+ D+ A+ER+ LYHVL G ++PL+ + E
Sbjct: 68 YFITQNDLCAICANPARDQRIVCVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNRE 127
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI L++R+ + I E+I A + +EG+ TA ++ L + ++TRLA G+P G +L
Sbjct: 128 DIYFDELLDRVRAEPIDEVIIATNPNLEGEATAFHLQRALAPLGARVTRLARGLPTGGDL 187
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D GT+ A+ R +
Sbjct: 188 EWADPGTLGSALEGRREM 205
>gi|119897250|ref|YP_932463.1| recombination protein RecR [Azoarcus sp. BH72]
gi|171704428|sp|A1K421|RECR_AZOSB RecName: Full=Recombination protein recR
gi|119669663|emb|CAL93576.1| recombination protein RecR [Azoarcus sp. BH72]
Length = 199
Score = 274 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 115/196 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI L +PG GP+SA+R HL+++ ++ LA A+ + + C C N
Sbjct: 4 PPSSLDELIAALRCLPGVGPKSAQRMAYHLLQRDQRGAARLAGALGHALEVLRHCQRCNN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C C + +RD + + VVE ADL +E++++ N LY+VL G LSPLD +GP ++
Sbjct: 64 FSEEAVCQRCANPRRDPATLCVVEMPADLAMIEQTQSYNGLYYVLMGRLSPLDGVGPREL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G++ LI R +++E+I A + T EG+ TAH + L VK++R++ G+P+G EL++
Sbjct: 124 GLERLIARATDGEVKEVILATNFTNEGEATAHTVATLLGARGVKVSRISRGVPVGGELEH 183
Query: 186 LDDGTIFEAIRSRTVL 201
D GTI +A+ R
Sbjct: 184 TDTGTIAQALVERRAF 199
>gi|108803359|ref|YP_643296.1| DNA replication and repair protein RecR [Rubrobacter xylanophilus
DSM 9941]
gi|122382097|sp|Q1AYP4|RECR_RUBXD RecName: Full=Recombination protein recR
gi|108764602|gb|ABG03484.1| DNA replication and repair protein RecR [Rubrobacter xylanophilus
DSM 9941]
Length = 199
Score = 274 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 120/196 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +E LI L+R+P GPRSA+R H+++ +++ LAEA+ + ++ C C N
Sbjct: 4 YARSVERLIAELSRLPTIGPRSAQRIAFHIIRTRKEEALALAEALREVKERIRPCRRCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D +RD SVI VVED D+ +ER+ LYHVLGG+LSPLD + PED+
Sbjct: 64 LTEGEECDICRDPRRDRSVICVVEDPYDIGPIERTGEYRGLYHVLGGALSPLDGVEPEDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ER+ + RELI A + G+ TA +I +++ + V++T LA G+P+G +L+Y
Sbjct: 124 RIAELVERVRSEGTRELILATNPNTTGEATAMFIAQEVRELPVRVTALASGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ A R L
Sbjct: 184 ADEVTLGRAFAGRREL 199
>gi|307294615|ref|ZP_07574457.1| recombination protein RecR [Sphingobium chlorophenolicum L-1]
gi|306879089|gb|EFN10307.1| recombination protein RecR [Sphingobium chlorophenolicum L-1]
Length = 198
Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 103/197 (52%), Positives = 146/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + L+R+PG GPRSARRA LHL+KK+E L PL A+ + +++ C ICG
Sbjct: 1 MASPEIEALTQALSRLPGLGPRSARRAVLHLLKKRESALEPLLRALDAVNDRLVTCGICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA + VVEDVADLWAL++S+ +HVLGG LS L+ + PED
Sbjct: 61 NVDTVDPCGICADPRRDARALCVVEDVADLWALDKSRLFPGRFHVLGGRLSALEGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ V++T+LA+G+P+G ELD
Sbjct: 121 LSIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPVRLTQLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 181 YLDEGTLAQALRARRPL 197
>gi|212212866|ref|YP_002303802.1| recombination protein RecR [Coxiella burnetii CbuG_Q212]
gi|212011276|gb|ACJ18657.1| recombination protein [Coxiella burnetii CbuG_Q212]
Length = 201
Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKK-EQLLGPLAEAMANIYNKVCLCSIC 63
+ + LI+ L +PG GP+SA+R HL+ K + L++A+ + +V C +C
Sbjct: 1 MFSPLTKQLIEALQCLPGIGPKSAQRMAFHLLAKSGQAKGLALSDALQSAIRQVGECKLC 60
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
C IC + +RD++++ VVE AD+ A+E+++ + Y V G LSPLD IGP+
Sbjct: 61 QIYTEQPLCNICNNPKRDSTLLCVVESPADVVAIEQTQIYSGRYFVFHGHLSPLDGIGPQ 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+IGI +L++R+ + I+ELI A +AT+EG+ TAHY+ + + +K +R+A+G+PMG EL
Sbjct: 121 EIGIPALLDRLRNETIKELIIATNATMEGKATAHYVANHIDHTKIKCSRIAHGVPMGGEL 180
Query: 184 DYLDDGTIFEAIRSR 198
+YLD GT+ A+ SR
Sbjct: 181 EYLDGGTLIHALHSR 195
>gi|119356989|ref|YP_911633.1| recombination protein RecR [Chlorobium phaeobacteroides DSM 266]
gi|166221930|sp|A1BFN2|RECR_CHLPD RecName: Full=Recombination protein recR
gi|119354338|gb|ABL65209.1| recombination protein RecR [Chlorobium phaeobacteroides DSM 266]
Length = 205
Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 77/204 (37%), Positives = 128/204 (62%), Gaps = 6/204 (2%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ T IE LI AR+PG G ++A+R +H++ + LA+A+ ++ ++V CS C
Sbjct: 2 RYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSEC 61
Query: 64 GNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
NV +DPC +C RD +VI VVE DL A E++ LYHVL G +SPLD IG
Sbjct: 62 QNVTDRDSDPCVLCRSSGRDRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGIG 121
Query: 122 PEDIGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
P+DI ++ L+ R+ + +RE++ A++ T+EG+TT+ YI LK + + ++++A GI
Sbjct: 122 PDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIARGI 181
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+EL+++D+ T+ A+ R+ +
Sbjct: 182 PVGAELEFIDEATLSRAMEGRSAM 205
>gi|56551708|ref|YP_162547.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762297|ref|ZP_04760378.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752715|ref|YP_003225608.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|73621533|sp|Q5NPC4|RECR_ZYMMO RecName: Full=Recombination protein recR
gi|56543282|gb|AAV89436.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373200|gb|EER62830.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552078|gb|ACV75024.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 198
Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 104/196 (53%), Positives = 149/196 (76%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ IENLIK LA +PG GPRSARRA L+L+KK+E L LA+A+ + + +C CG
Sbjct: 1 MSASPIENLIKSLAVMPGLGPRSARRAALYLIKKRETALYNLAQALDEVQQSLVICPECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+D+ +PC+IC D +RD +++ VVE+VADLWAL+RS+ +HVLGG LS LD I PED
Sbjct: 61 NIDSCNPCSICSDPKRDDALLCVVEEVADLWALDRSRLFAGRFHVLGGRLSALDGITPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L++R++ KI+E++ A++AT+EGQTTAHYI D L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LSIDALVKRVQSGKIKEVVLAMNATLEGQTTAHYITDCLEKYPVRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLDDGT+ +A+R+R
Sbjct: 181 YLDDGTLAQALRARRP 196
>gi|146307667|ref|YP_001188132.1| recombination protein RecR [Pseudomonas mendocina ymp]
gi|166221955|sp|A4XVN4|RECR_PSEMY RecName: Full=Recombination protein recR
gi|145575868|gb|ABP85400.1| recombination protein RecR [Pseudomonas mendocina ymp]
Length = 199
Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A+ V C C +
Sbjct: 3 FSPLIRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRCRS 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C+D++RD S++ VVE D+ A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LSEDEVCQLCLDERRDDSLLCVVEGPMDVHAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ERIE E+I A + T+EG+ TAHYI L G + +R+A+G+P+G EL+
Sbjct: 122 GIPELLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLIASRIAHGMPLGGELEL 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R +
Sbjct: 182 VDGGTLAHALAGRRPI 197
>gi|86142320|ref|ZP_01060830.1| recombination protein recR [Leeuwenhoekiella blandensis MED217]
gi|85831072|gb|EAQ49529.1| recombination protein recR [Leeuwenhoekiella blandensis MED217]
Length = 205
Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 126/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +E + ++++PG G R+A R LHL+++ E L EA+ + + C C
Sbjct: 2 EFSSKLLEQAVYEMSQLPGIGKRTALRLVLHLLQQPEAQTEQLTEALTGLRTGIKFCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T+ C IC + R+++++ VVEDV D+ A+E + YHVLGG +SPLD IGP+
Sbjct: 62 HNISDTELCEICANPNRESAIVCVVEDVRDVMAIENTSQYRGHYHVLGGKISPLDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLIE+++ I E+IFA+S+T+EG TT YI +L+G++VK + +A GI +G EL
Sbjct: 122 DLTIYSLIEKVKSGAIEEIIFALSSTMEGDTTNFYIYRQLEGLNVKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D+ T+ +I +R
Sbjct: 182 EFADEVTLGRSILNRIPF 199
>gi|71734841|ref|YP_275477.1| recombination protein RecR [Pseudomonas syringae pv. phaseolicola
1448A]
gi|289626816|ref|ZP_06459770.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646517|ref|ZP_06477860.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str.
2250]
gi|298487770|ref|ZP_07005811.1| Recombination protein RecR [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|123635795|sp|Q48GK6|RECR_PSE14 RecName: Full=Recombination protein recR
gi|71555394|gb|AAZ34605.1| recombination protein RecR [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298157862|gb|EFH98941.1| Recombination protein RecR [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320323988|gb|EFW80072.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str.
B076]
gi|320328124|gb|EFW84129.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330869031|gb|EGH03740.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330986555|gb|EGH84658.1| recombination protein RecR [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 200
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|325917359|ref|ZP_08179574.1| DNA replication and repair protein RecR [Xanthomonas vesicatoria
ATCC 35937]
gi|325536400|gb|EGD08181.1| DNA replication and repair protein RecR [Xanthomonas vesicatoria
ATCC 35937]
Length = 197
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 113/194 (58%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ LI+ +PG G +SA+R H+++++ + LA A+AN KV C+ C +
Sbjct: 2 SSLLDQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATALANAVEKVGHCAQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C IC + RD + VVE AD A+E + +Y +L G LSPLD IGP ++G
Sbjct: 62 TEAQICPICANVSRDRQQLCVVESPADRLAIEHATGYRGVYFILQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ +I E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDQLGERLAAGEITEMIIATNATVEGEATAHYLAQLARQHGVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|296118024|ref|ZP_06836606.1| recombination protein RecR [Corynebacterium ammoniagenes DSM 20306]
gi|295968910|gb|EFG82153.1| recombination protein RecR [Corynebacterium ammoniagenes DSM 20306]
Length = 218
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 21/215 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R H++ + + L+ A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHVLHMDPEDIDRLSSALVAVRDGVTFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC++ QRD I VVE+ D+ +ER+ YHVLGG+L PL IGP+D
Sbjct: 61 NISRESVCRICVNSQRDRGTICVVEEPKDIQVIERTGEYQGRYHVLGGALDPLANIGPKD 120
Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I L++RI E + E+I A EG+ TA Y++ L+
Sbjct: 121 LNISQLLQRIGGVLPDRELADSTKENPQYDETPDVTEVILATDPNTEGEATAAYLVRLLR 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
D+KITRLA G+P+G +L+++D+ T+ A++ R
Sbjct: 181 DFPDLKITRLASGMPLGGDLEFVDELTLSRALQGR 215
>gi|149278408|ref|ZP_01884545.1| recombination protein [Pedobacter sp. BAL39]
gi|149230778|gb|EDM36160.1| recombination protein [Pedobacter sp. BAL39]
Length = 205
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E+ + +R+PG G ++A R LHL+ K+++ + + + ++ CS C
Sbjct: 2 NFSSKLLEDAVNEFSRLPGVGQKTALRLVLHLLGKEQEEVTNFGNTIIRLRQEIKHCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC +R+ +I VVED D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 HNISDQEICEICASSKRNKEIICVVEDTRDVMAVENTSQYFGVYHVLGGLISPMDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL++R+ ++E+I A+SAT+EG TT Y+ +LK + IT +A GI G EL
Sbjct: 122 DLYIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSIVTRVP 198
>gi|325925318|ref|ZP_08186721.1| DNA replication and repair protein RecR [Xanthomonas perforans
91-118]
gi|325544309|gb|EGD15689.1| DNA replication and repair protein RecR [Xanthomonas perforans
91-118]
Length = 197
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 113/194 (58%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI+ +PG G +SA+R H+++++ + LA A+ N KV C C +
Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVEKVGHCVQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ C+IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G
Sbjct: 62 TESEICSICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|256820997|ref|YP_003142276.1| recombination protein RecR [Capnocytophaga ochracea DSM 7271]
gi|256582580|gb|ACU93715.1| recombination protein RecR [Capnocytophaga ochracea DSM 7271]
Length = 206
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + +A++P G R+A R LHL+K+ E+ LA+A+ + + C C
Sbjct: 2 DFSSKLLENAVYEIAQLPSIGKRTALRLALHLLKQPEEQSLQLAQAIVALRTHIQYCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC + RD V+ VVED D+ A+E + YHVLGG +SP+D I P
Sbjct: 62 HNISDVDLCEICANPMRDTGVVCVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SLIE+++ K+ ELI A+S T+EG TT YI +++ + I+ +A GI +G EL
Sbjct: 122 NLHIASLIEKVKTGKVTELILALSNTMEGDTTNFYIYKQVESYHITISTIARGIAVGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYTDEVTLGRSITQRIPF 199
>gi|90407632|ref|ZP_01215812.1| recombination protein RecR [Psychromonas sp. CNPT3]
gi|90311223|gb|EAS39328.1| recombination protein RecR [Psychromonas sp. CNPT3]
Length = 199
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++ L++ L +PG GP+SA+R T HL+ K L+ + +++ C C
Sbjct: 3 STSLLDELMQALQCLPGVGPKSAQRMTYHLLDKNRSGALKLSHLLERGVHEIGHCQQCRT 62
Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C++C +++R I VVE D+ A+E++ + Y VL G LSPLD IGPE
Sbjct: 63 FTELNLCSLCSNEKRKVNGQICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGIGPEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L ++I + E+I A + T+EG+ TA+YI + K VK++R+A+G+P+G EL+
Sbjct: 123 LGLALLEQQISAPHVTEVILATNPTVEGEATAYYIAEIAKKFHVKVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R+ +
Sbjct: 183 YVDSTTLSHSFAGRSEI 199
>gi|58580689|ref|YP_199705.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622623|ref|YP_449995.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166710951|ref|ZP_02242158.1| recombination protein RecR [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|188578333|ref|YP_001915262.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae PXO99A]
gi|73621531|sp|Q5H401|RECR_XANOR RecName: Full=Recombination protein recR
gi|123522961|sp|Q2P6V6|RECR_XANOM RecName: Full=Recombination protein recR
gi|58425283|gb|AAW74320.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366563|dbj|BAE67721.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522785|gb|ACD60730.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 197
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 112/194 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI+ +PG G +SA+R H+++++ + LA +AN KV C C +
Sbjct: 2 SSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ C IC RD + VVE AD A+E + LY VL G LSPLD IGP ++G
Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|300691827|ref|YP_003752822.1| Recombination protein recR [Ralstonia solanacearum PSI07]
gi|299078887|emb|CBJ51548.1| Recombination protein recR [Ralstonia solanacearum PSI07]
Length = 206
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 7 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 66
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 67 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K +RLA G+P+G
Sbjct: 127 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKASRLARGVPVGG 186
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206
>gi|297717872|gb|ADI50079.1| recombination protein RecR [Candidatus Odyssella thessalonicensis
L13]
Length = 197
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 140/196 (71%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EI+ LI+ L+++PG GPRS RR LHL+KK+E++ PL + MA KV C IC
Sbjct: 1 MNSPEIQLLIQHLSKLPGLGPRSGRRVALHLLKKREKIFRPLIQVMAEAEQKVRTCHICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+D +DPC +C D +RD + VVEDVADLWALER+ +YHVLGG LS +D IGP+
Sbjct: 61 ALDASDPCTLCTDPKRDPHQLCVVEDVADLWALERANTYRGVYHVLGGVLSAIDGIGPQQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ IQSL++R+ + E+I A++AT++GQTT HY++++L+ +KIT LA+G+P+G ELD
Sbjct: 121 LTIQSLLDRVAKGSVHEVILALNATVDGQTTIHYLIEQLREHKIKITTLAHGVPIGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+F A ++R
Sbjct: 181 YLDEGTLFTAFQARRS 196
>gi|260063519|ref|YP_003196599.1| recombination protein RecR [Robiginitalea biformata HTCC2501]
gi|88782963|gb|EAR14137.1| recombination protein recR [Robiginitalea biformata HTCC2501]
Length = 208
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 130/198 (65%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+IT K + + ++++PG G R+A R LHL+++ + LAEA+ ++ + +C C C
Sbjct: 2 EITSKLLGKAVDEVSQLPGIGKRTALRLVLHLLRQPKARTEKLAEALTSLRSGICRCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ ++ C IC +RD S+I VVED+ D+ A+E + LYHVLGG +SP++ IGP+
Sbjct: 62 HNISDSERCEICASPKRDRSLICVVEDIRDIMAIESTGHYRGLYHVLGGKISPMEGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+ER+ +RELI A+SAT+EG TT Y+ +L+G++V+++ +A GIP+G +L
Sbjct: 122 DLQIASLVERVRDGGVRELILALSATMEGDTTNFYLYKQLEGVEVELSTIARGIPVGDDL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILQRIPF 199
>gi|296136310|ref|YP_003643552.1| recombination protein RecR [Thiomonas intermedia K12]
gi|295796432|gb|ADG31222.1| recombination protein RecR [Thiomonas intermedia K12]
Length = 203
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 112/192 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI L +PG GP+SA R HL++ + +A A+ V C+ C +
Sbjct: 10 PALDALIDALRHLPGVGPKSASRMAYHLLEHDREAAQHIARALDAALGAVQRCTRCNTLT 69
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D +RDA + VVE ADL A+E++ + LY VL G +SPLD +GP++IG+
Sbjct: 70 EDAVCSICADPRRDARQLCVVESPADLAAVEQTLTYHGLYFVLMGRISPLDGLGPKEIGL 129
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + E+I A + T EG+ TAH I + L+ +++TRLA G+P G+EL+Y+D
Sbjct: 130 DRLMTRALDGAVEEVILATNFTNEGEATAHVIAETLRPRGLRVTRLARGVPAGAELEYVD 189
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 190 LGTIARALVDRR 201
>gi|315126894|ref|YP_004068897.1| recombination protein recR [Pseudoalteromonas sp. SM9913]
gi|315015408|gb|ADT68746.1| recombination protein recR [Pseudoalteromonas sp. SM9913]
Length = 202
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +LI+ L PG GP+SA+R HL+++ + L A+ V C C
Sbjct: 4 SDSLTSLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAVGHCQSCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C IC+ +R D+ ++ VVE D+ A+E++ LY VL G LSP+D IGP++I
Sbjct: 64 TEQAQCDICLSTKRQDSGILCVVESPTDVLAIEQTGQYKGLYFVLMGHLSPIDGIGPKEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +++ I E+I A + ++EG+TTAHYI +V +R+A+GIP+G ELD
Sbjct: 124 GLDVLEQKLAQGGINEVILATNPSVEGETTAHYIAQLCHKNNVGASRIAHGIPVGGELDL 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R +
Sbjct: 184 VDGMTLMHAFSGRRL 198
>gi|113955202|ref|YP_730250.1| recombination protein RecR [Synechococcus sp. CC9311]
gi|123327873|sp|Q0IBC2|RECR_SYNS3 RecName: Full=Recombination protein recR
gi|113882553|gb|ABI47511.1| recombination protein RecR [Synechococcus sp. CC9311]
Length = 189
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I R+PG GPR+A+R LHL+++ E+ + A+A+ ++V C C ++ C
Sbjct: 2 IDQFERLPGIGPRTAQRLALHLLRQPEEQIHSFADALLAARSQVGQCQTCFHLSAEPTCE 61
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC + +R ++ VV D DL ALER++ YHVLGG +SP+D IGPE + I +L++R
Sbjct: 62 ICRNPERSIGMLCVVADSRDLLALERTREYAGRYHVLGGLISPMDGIGPEMLQISNLVKR 121
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+ +I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y DD T+
Sbjct: 122 VAADEINEVILALTPSVEGDTTSLYLARLLKPF-TEVSRIAYGLPVGSELEYADDVTLSR 180
Query: 194 AIRSRTV 200
A+ R
Sbjct: 181 ALEGRRA 187
>gi|294340546|emb|CAZ88931.1| Recombination protein recR [Thiomonas sp. 3As]
Length = 203
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 112/192 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI L +PG GP+SA R HL++ + +A A+ V C+ C +
Sbjct: 10 PALDALIDALRHLPGVGPKSASRMAYHLLEHDREAAQHIARALDAALGAVQRCARCNTLT 69
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C+IC D +RDA + VVE ADL A+E++ + LY VL G +SPLD +GP++IG+
Sbjct: 70 EDAVCSICADPRRDARQLCVVESPADLAAVEQTLTYHGLYFVLMGRISPLDGLGPKEIGL 129
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + E+I A + T EG+ TAH I + L+ +++TRLA G+P G+EL+Y+D
Sbjct: 130 DRLMTRALDGAVEEVILATNFTNEGEATAHVIAETLRPRGLRVTRLARGVPAGAELEYVD 189
Query: 188 DGTIFEAIRSRT 199
GTI A+ R
Sbjct: 190 LGTIARALVDRR 201
>gi|301058419|ref|ZP_07199440.1| recombination protein RecR [delta proteobacterium NaphS2]
gi|300447475|gb|EFK11219.1| recombination protein RecR [delta proteobacterium NaphS2]
Length = 203
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + + L+ ++PG G +SA R L +++ +L LA ++ ++ K+ CSIC
Sbjct: 3 IYPEPLVKLVDQFTKLPGIGQKSATRMALFILRSNRELAESLARSLIDVKEKIHFCSICF 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D QR I VVE D ALE S YHVL G LSPLD +GPED
Sbjct: 63 NLTDEDPCAICRDGQRADGTICVVETPGDQMALEESGVYRGRYHVLHGVLSPLDGVGPED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182
+ I+ L+ R+E ++I+E+I A + T G+TTA +I + K + +TR+A G+PMG +
Sbjct: 123 LRIEKLLGRLEREQIKEIILATNPTTGGETTASFISALISEKHPAINVTRIALGVPMGGD 182
Query: 183 LDYLDDGTIFEAIRSRTV 200
L ++D T+ A++ R
Sbjct: 183 LKFMDTMTLQHALKRRVQ 200
>gi|169351619|ref|ZP_02868557.1| hypothetical protein CLOSPI_02399 [Clostridium spiroforme DSM 1552]
gi|169291841|gb|EDS73974.1| hypothetical protein CLOSPI_02399 [Clostridium spiroforme DSM 1552]
Length = 197
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 119/196 (60%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +NL+ R+PG G +SA R +++ ++ + ++ +A+I++ + C CG+
Sbjct: 3 YPRSFQNLVNCFKRLPGIGGKSAERLAYYILSMDKEYVDDFSKTLASIHDNIHYCKKCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D+ RD SVI VVE+ D++A+E+ K N LYHVL G++S +D +D+
Sbjct: 63 ICEDEICDICKDKSRDQSVICVVEESKDVFAMEKVKEYNGLYHVLHGTMSIIDGKTMDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL R++ I+E+I A + T +G+TTA Y+ L ++ +R+A G+P+GS +DY
Sbjct: 123 NIASLFNRLDD-SIKEVIIATNPTRDGETTALYLAKLLAKRNINTSRIANGLPIGSNIDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +++ R +
Sbjct: 182 ADELTLLKSLEGRKKI 197
>gi|78046685|ref|YP_362860.1| recombination protein RecR [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|123585701|sp|Q3BWK3|RECR_XANC5 RecName: Full=Recombination protein recR
gi|78035115|emb|CAJ22760.1| recombination protein RecR [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 197
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 112/194 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI+ +PG G +SA+R H+++++ + LA A+ N KV C C +
Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVEKVGHCVQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G
Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|332291051|ref|YP_004429660.1| recombination protein RecR [Krokinobacter diaphorus 4H-3-7-5]
gi|332169137|gb|AEE18392.1| recombination protein RecR [Krokinobacter diaphorus 4H-3-7-5]
Length = 205
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+++ E L EA+ + + + C C
Sbjct: 2 EFSSKLLENAVYEMSQLPGVGKRTALRLVLHLLRQPETQTHHLTEALNTMRDTIKFCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + RD S++ VVEDV D+ A+E + LYHVLGG +SPLD IGP+
Sbjct: 62 HNISDVALCEICSNPNRDESIVCVVEDVRDVMAIENTSQYRGLYHVLGGKISPLDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SLI+R + ++E+IFA+S+T+EG TT YI +L+ D+ + +A GI +G EL
Sbjct: 122 DLNIFSLIDRAKSGVVKEVIFALSSTMEGDTTNFYIYRQLEAYDIATSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILHRIPF 199
>gi|227549653|ref|ZP_03979702.1| recombination protein RecR [Corynebacterium lipophiloflavum DSM
44291]
gi|227078277|gb|EEI16240.1| recombination protein RecR [Corynebacterium lipophiloflavum DSM
44291]
Length = 208
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 11/208 (5%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R +L+K+ + L A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFYLLKQDPDDVDRLVGALNAVRDGVAFCRICS 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C IC D RDA ++ VVED D+ +ER+ YHVLGG+L PL +GP+D
Sbjct: 61 NVSREEVCRICADSSRDAGLVCVVEDAKDIQVIERTGEFRGRYHVLGGALDPLANVGPKD 120
Query: 125 IGIQSLIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRL 173
+ I SL++RI E + E+I A EG+ TA Y+ LK D+ ++RL
Sbjct: 121 LSIASLLQRIGAVLPDVDDAEAPNVHEVIIATDPDTEGEATASYLARLLKDFPDLVVSRL 180
Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A G+P+G +L+++D+ T+ A+ R L
Sbjct: 181 ASGMPLGGDLEFVDELTLSRALTGRLTL 208
>gi|284928920|ref|YP_003421442.1| DNA replication and repair protein RecR [cyanobacterium UCYN-A]
gi|284809379|gb|ADB95084.1| DNA replication and repair protein RecR [cyanobacterium UCYN-A]
Length = 185
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP+SA+R +++K E + A+A+ N + LC+ C + C IC
Sbjct: 1 MQRLPGIGPKSAQRLAFYILKLPESEVQAFAKALINAKQRTGLCTKCFHFSEKPICEICS 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ RD+++I VV D D+ ALE+++ +YHVLGG +SP+D IGPE + ++ L+ R+
Sbjct: 61 NTNRDSNLICVVADSRDVIALEKTREYKGMYHVLGGIMSPIDGIGPEQLNVEPLVRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+ I+E+I AIS T+EG+T Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+
Sbjct: 121 ENIKEVILAISPTVEGETMTLYLCQVLKAF-TKVTRIAFGLPVGGDLEYTDEITLARALA 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRQEL 184
>gi|110637455|ref|YP_677662.1| recombination protein RecR [Cytophaga hutchinsonii ATCC 33406]
gi|122966886|sp|Q11W94|RECR_CYTH3 RecName: Full=Recombination protein recR
gi|110280136|gb|ABG58322.1| recombination protein [Cytophaga hutchinsonii ATCC 33406]
Length = 205
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K +E+ + ++++PG G ++A R LHL+KK+ + LA A+ N + C C
Sbjct: 2 NFPSKLLEDAVLEISKLPGIGKKTALRLVLHLLKKESKESESLANALLNARENIRYCKKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + CAIC +RD V+ +VED+ D+ A+E + +YHV+GG +SP++RIGP+
Sbjct: 62 HTISDHELCAICTSNKRDKRVVCIVEDIRDVLAIENTNQYFGVYHVIGGVISPMERIGPD 121
Query: 124 DIGIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ I SLIER I +I+E+I +S T+EG TTA +I KLK +KI+ +A GIP G E
Sbjct: 122 QLNINSLIERVITDTEIKEIILGLSPTMEGDTTAFFITKKLKSYPIKISTIARGIPFGGE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y+D+ T+ +I +RT+
Sbjct: 182 LEYMDEVTLGRSIATRTLF 200
>gi|237799334|ref|ZP_04587795.1| recombination protein RecR [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022190|gb|EGI02247.1| recombination protein RecR [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 200
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEEFCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERIAGQGTFTEVILATNPTVEGEATAHYIAQLLNDKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|254524485|ref|ZP_05136540.1| recombination protein RecR [Stenotrophomonas sp. SKA14]
gi|219722076|gb|EED40601.1| recombination protein RecR [Stenotrophomonas sp. SKA14]
Length = 199
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI L +PG G ++A+R HL++++ + LAE +A ++ C+ C
Sbjct: 1 MSAPLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAETLALAVERIGHCAQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP +
Sbjct: 61 DFSETELCPTCANSSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G++ L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+
Sbjct: 121 LGLEQLENRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ A +R+
Sbjct: 181 YVDRGTLSHAFGTRSEF 197
>gi|167755135|ref|ZP_02427262.1| hypothetical protein CLORAM_00639 [Clostridium ramosum DSM 1402]
gi|237733439|ref|ZP_04563920.1| recombination protein recR [Mollicutes bacterium D7]
gi|167705185|gb|EDS19764.1| hypothetical protein CLORAM_00639 [Clostridium ramosum DSM 1402]
gi|229383474|gb|EEO33565.1| recombination protein recR [Coprobacillus sp. D7]
Length = 197
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 116/196 (59%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++L+ R+PG G +SA R H++ ++ + + A+ +I K+ C CG+
Sbjct: 3 YPQAFQDLVDCFKRLPGIGGKSAERLAYHVLSMDKKYVDEFSAAIGSIQTKIHYCKKCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D RD + I +VED D++A+E+ K + LYHVL G++S +D +D+
Sbjct: 63 ICEGEICDICQDPDRDQTTICIVEDPKDVFAMEKVKEYHGLYHVLHGAMSIMDGKTMDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL ER++ I+E+I A + T +G+TTA Y+ L ++ +R+A G+P+GS +DY
Sbjct: 123 NIASLFERLDD-SIKEVIIATNPTRDGETTALYLAKLLSKKNINTSRIANGLPIGSNIDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +++ R +
Sbjct: 182 ADELTLLKSLEGRKKI 197
>gi|21241866|ref|NP_641448.1| recombination protein RecR [Xanthomonas axonopodis pv. citri str.
306]
gi|294627934|ref|ZP_06706513.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666541|ref|ZP_06731782.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|24212230|sp|Q8PNG0|RECR_XANAC RecName: Full=Recombination protein recR
gi|21107249|gb|AAM35984.1| recombination protein RecR [Xanthomonas axonopodis pv. citri str.
306]
gi|292597848|gb|EFF42006.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603685|gb|EFF47095.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 197
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 112/194 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI+ +PG G +SA+R H+++++ + LA A+ + KV C C +
Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G
Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|227832006|ref|YP_002833713.1| recombination protein [Corynebacterium aurimucosum ATCC 700975]
gi|262184138|ref|ZP_06043559.1| recombination protein RecR [Corynebacterium aurimucosum ATCC
700975]
gi|227453022|gb|ACP31775.1| recombination protein [Corynebacterium aurimucosum ATCC 700975]
Length = 218
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 21/215 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R H++ + + + L +A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHVLHQDPEEIDRLQKALGAVRDGVTFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C ICI+ QRDAS I VVE+ D+ +ER+ + YHVLGG+L PL +GP+D
Sbjct: 61 NISREEVCRICINSQRDASTICVVEEPKDIQVIERTGEYDGRYHVLGGALDPLANVGPKD 120
Query: 125 IGIQSLIER--------------------IEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I L++R + I E+I A EG+ TA Y++ L+
Sbjct: 121 LNISQLLQRLGGVLPDRELADSTPEEPLYDDSPDITEVILATDPNTEGEATAAYLVRLLR 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+KITRLA G+P+G +L+++D+ T+ A+ R
Sbjct: 181 DFPGLKITRLASGMPLGGDLEFVDELTLSRALSGR 215
>gi|332283345|ref|YP_004415256.1| recombination protein RecR [Pusillimonas sp. T7-7]
gi|330427298|gb|AEC18632.1| recombination protein RecR [Pusillimonas sp. T7-7]
Length = 202
Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M+ + + + +LI+ L R+PG G RSARR HL++ L+ A+A+ +
Sbjct: 1 MESPLPEPEPLTSLIEALRRLPGVGVRSARRMAYHLLQYDISGAEQLSRALASAAQGLRH 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C D CA C + +RD S++ VVE AD +E S LY+VL G L+PL+
Sbjct: 61 CARCNGFAEEDVCATCTNPKRDPSLLCVVETPADQNMIESSHGYRGLYYVLMGRLTPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GP + LI+R+ ++E+I A + T EG+TTAHY+ + L+ + ++RLA G+P
Sbjct: 121 VGPRALQFDRLIQRVSDGIVQEVILATNFTAEGETTAHYLSELLRARGLTVSRLARGVPA 180
Query: 180 GSELDYLDDGTIFEAIRSRT 199
GSEL+Y+D GTI A+ R
Sbjct: 181 GSELEYVDAGTIAWALMERR 200
>gi|78224610|ref|YP_386357.1| recombination protein RecR [Geobacter metallireducens GS-15]
gi|123570728|sp|Q39Q42|RECR_GEOMG RecName: Full=Recombination protein recR
gi|78195865|gb|ABB33632.1| DNA replication and repair protein RecR [Geobacter metallireducens
GS-15]
Length = 197
Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L+ L ++PG G ++A R HL+K E LAE++ + ++V CS+C
Sbjct: 4 SSNSFARLLAELQKLPGVGEKTALRLAFHLLKYPENTA-ALAESLGEVLSRVKFCSVCFG 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC +C RD + + VVE+ DL A+ER++A YHVL G+LSPL+ + P+ +
Sbjct: 63 ITEEDPCRLCSSD-RDETSLCVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+E +RE++ A + ++EG+TTA Y+ ++K + +++TRLA+GIP+GS+L+Y
Sbjct: 122 RIAELMRRLEEGTVREVVIATNFSVEGETTALYLARQIKPLGIRVTRLAHGIPLGSDLEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 VDAATVQRALEGRSEL 197
>gi|237784774|ref|YP_002905479.1| recombination protein RecR [Corynebacterium kroppenstedtii DSM
44385]
gi|237757686|gb|ACR16936.1| recombination protein [Corynebacterium kroppenstedtii DSM 44385]
Length = 218
Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R HL+ + L A+ ++ + + C ICG
Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHLLHTDPDDIDRLRAALTSVRDGITFCRICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D RDA+ I V+E+ D+ +E + YHVLGG+L PL +GP+D
Sbjct: 61 NISRNDVCRICADPNRDATTICVIEEPKDIEVIEATGEYQGRYHVLGGALDPLANVGPKD 120
Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I L++RI + I+E+I A EG+ T+ Y+ LK
Sbjct: 121 LSITQLLQRIAGVLPDRETADSTPDEPRYEDAPTIKEVIIATDPNTEGEATSSYLARLLK 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+ +RLA G+P+G +L+Y+D+ T+ A+ R L
Sbjct: 181 DFPDLTTSRLASGMPIGGDLEYVDELTLSRALAGRLPL 218
>gi|146298126|ref|YP_001192717.1| recombination protein RecR [Flavobacterium johnsoniae UW101]
gi|189029362|sp|A5FN24|RECR_FLAJO RecName: Full=Recombination protein recR
gi|146152544|gb|ABQ03398.1| recombination protein RecR [Flavobacterium johnsoniae UW101]
Length = 206
Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 122/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K IE + ++++PG G R+A R LHL+K+ ++ G L++A+ N+ + C C
Sbjct: 2 EFSSKLIEKAVNEMSQLPGIGKRTALRLVLHLLKQPKEQTGFLSQALLNMREDIKFCENC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T C IC + R+ I VVED+ D+ A+E + +YHVLGG +SP++ +GP
Sbjct: 62 HNISDTKVCEICANSVRNHQTICVVEDIRDVMAIENTGQYKGIYHVLGGKISPIEGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I SL+E+++ K+ E+IFA+S+T+EG TT YI ++ ++ I+ +A GI +G EL
Sbjct: 122 QLNISSLVEKVKSGKVVEIIFALSSTMEGDTTNFYIYKQIAESEIIISTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYADEITLGRSILHRVPF 199
>gi|217969822|ref|YP_002355056.1| recombination protein RecR [Thauera sp. MZ1T]
gi|217507149|gb|ACK54160.1| recombination protein RecR [Thauera sp. MZ1T]
Length = 197
Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 119/196 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ ++ LI+ L +PG GP+SA+R HL+++ ++ L A+ + + C+ C
Sbjct: 1 MSPSSLDELIEALRCLPGVGPKSAQRMAYHLLQRDQRGAARLGNALLHALEVLRHCARCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C C + +RDA+++ VVE ADL +E++++ N LY+VL G LSPLD +GP +
Sbjct: 61 SFTEDEVCPRCANPRRDAALLCVVEMPADLAMIEQTQSYNGLYYVLMGRLSPLDGVGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + LI R + +RE+I A + T EG+ TAH + L VK++RL+ G+P+G EL+
Sbjct: 121 LRLDKLIARATEEGVREVILATNFTNEGEATAHTVASLLGARGVKVSRLSRGVPVGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
+ D GTI +A+ R
Sbjct: 181 HTDIGTIGQALIERRA 196
>gi|94495736|ref|ZP_01302316.1| recombinational DNA repair protein [Sphingomonas sp. SKA58]
gi|94425124|gb|EAT10145.1| recombinational DNA repair protein [Sphingomonas sp. SKA58]
Length = 198
Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 143/196 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + L+R+PG GPRSARRA LHL+K++E + PL A+ + ++ C +CG
Sbjct: 1 MASPEIETLTQALSRLPGLGPRSARRAVLHLLKRREGAMEPLLRALEAVNERLVTCHLCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RD + VVEDV+DLWAL++S+ +HVLGG LS LD + PED
Sbjct: 61 NVDTVDPCGICADPRRDPRALCVVEDVSDLWALDKSRLFPGRFHVLGGRLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ +++T+LA+G+P+G ELD
Sbjct: 121 LTIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPIRLTQLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|312129997|ref|YP_003997337.1| recombination protein recr [Leadbetterella byssophila DSM 17132]
gi|311906543|gb|ADQ16984.1| recombination protein RecR [Leadbetterella byssophila DSM 17132]
Length = 200
Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ IE + ++++PG G +SA R LHL+K +Q+ L+ A+ N+ C+ C
Sbjct: 2 NYPSRTIEEAVSEISKLPGIGKKSALRMALHLLKSDKQVAHSLSSALVNLVENTTFCTEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +R+ S+I VV+D D+ A+E + LYHVLGG ++P+ IGP
Sbjct: 62 HNISDQSICQICSSHRRERSIIAVVQDTKDVLAIENTGQYQGLYHVLGGVIAPVQGIGPN 121
Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ I +L+ER+ + ++++E+I A+S T+EG TTA YI KL ++I+ +A GIP+G +
Sbjct: 122 QLHIDALVERLRKNEEVKEVILALSPTMEGDTTAFYIRKKLAEFPIRISTIARGIPVGGD 181
Query: 183 LDYLDDGTIFEAIRSR 198
L+Y D+ T+ +I SR
Sbjct: 182 LEYTDEITLGRSILSR 197
>gi|224541624|ref|ZP_03682163.1| hypothetical protein CATMIT_00795 [Catenibacterium mitsuokai DSM
15897]
gi|224525462|gb|EEF94567.1| hypothetical protein CATMIT_00795 [Catenibacterium mitsuokai DSM
15897]
Length = 197
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K E L+ +PG G + A R + E+ + ++A+ + V C ICGN
Sbjct: 3 YPKSFEELMTCFKMLPGIGNKGAERMAYAIYDMSEEDVKRFSQALTSFKENVHTCPICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC D +RD S I VVE D++A+E+ K + LYHVLGG++S +D +D+
Sbjct: 63 LSEGDKCEICADHERDQSTICVVESPKDVFAMEKMKEYHGLYHVLGGTISIMDGKTMDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I SL +RI +E+I A +AT EG+TTA ++ L V TR+A+G+P+GS LDY
Sbjct: 123 NIMSLFDRI-TPDTKEVIIATNATREGETTALFLAKLLDKKGVNTTRIAHGLPIGSSLDY 181
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ ++ R
Sbjct: 182 ADELTLLKSFEGRKK 196
>gi|300172667|ref|YP_003771832.1| recombination protein RecR [Leuconostoc gasicomitatum LMG 18811]
gi|299887045|emb|CBL91013.1| recombination protein RecR [Leuconostoc gasicomitatum LMG 18811]
Length = 201
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + E+ + ++++ + + CS+CGN
Sbjct: 3 YPEPIAKLIDSYTKLPGIGSKTATRLAFYTLGMDEKDVLDFSKSLVSAKKDLTFCSVCGN 62
Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ +PC IC D RD + VVE+ D+ A+E ++ + LYHVL G +SP GPE
Sbjct: 63 ITENSINPCVICRDVTRDQDTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 122
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I E+I + T EG+ TA Y+ LK +K+TRLA+G+ +GS+
Sbjct: 123 DINLPSLIRRLSEHQEIDEVIVGTNVTAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D T+ +A++ RT L
Sbjct: 183 IDYADQLTLIKAVQGRTEL 201
>gi|218779846|ref|YP_002431164.1| recombination protein RecR [Desulfatibacillum alkenivorans AK-01]
gi|226738997|sp|B8FG16|RECR_DESAA RecName: Full=Recombination protein recR
gi|218761230|gb|ACL03696.1| recombination protein RecR [Desulfatibacillum alkenivorans AK-01]
Length = 199
Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ NLIK L+++PG G ++A R LH+++ + LAE+++ V LCS+C
Sbjct: 3 FYPPSLVNLIKQLSKLPGIGEKTAERLALHILRGSVKDAQALAESISEAKETVRLCSVCY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ +DPC IC D RD V+ VVE D+ ALE+S A YHVL G LSP++ +GP++
Sbjct: 63 GLADSDPCHICRDATRDQDVVCVVEQGTDMVALEKSGAFKGRYHVLQGCLSPMNGVGPDN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ER++ +KI+E++ A ++EG++TA+Y+ L+G VKITR+A G+P+G +L
Sbjct: 123 LRIRELVERLKKEKIKEVVVATGTSVEGESTANYLRQVLEGSGVKITRIASGVPIGGDLK 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ SR L
Sbjct: 183 YTDALTLKRALDSRHCL 199
>gi|224368755|ref|YP_002602916.1| recombination protein RecR [Desulfobacterium autotrophicum HRM2]
gi|259563692|sp|C0QAG9|RECR_DESAH RecName: Full=Recombination protein recR
gi|223691471|gb|ACN14754.1| RecR [Desulfobacterium autotrophicum HRM2]
Length = 199
Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 115/196 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + I NLIK L+ +PG G R+A R LH++ LA + + KV LC C
Sbjct: 2 DLYPESILNLIKSLSTLPGIGRRTAERLALHILHAPLHEAQTLANDILELKQKVTLCRTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
++ C IC + +RDAS+I VVE D+ A+E+S A + LYHVLGG+LSP+D IGP+
Sbjct: 62 FSLSDQPECRICSNPRRDASIICVVEKPTDIVAIEKSGAFSGLYHVLGGALSPMDGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I+ L R K E+I A +EG+ TA YI D+L+ V +TR+A G+PMG +
Sbjct: 122 ELRIRELFSRACSKTTTEVIIATGTNVEGEATAAYISDQLRKKGVNVTRIASGVPMGGDF 181
Query: 184 DYLDDGTIFEAIRSRT 199
Y+D T+ A+ R
Sbjct: 182 QYVDQVTMQRAMEGRR 197
>gi|15838408|ref|NP_299096.1| recombination protein RecR [Xylella fastidiosa 9a5c]
gi|9106887|gb|AAF84616.1|AE004002_6 recombination protein [Xylella fastidiosa 9a5c]
Length = 244
Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C
Sbjct: 47 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECR 106
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP +
Sbjct: 107 DFSETKICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 166
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+
Sbjct: 167 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 226
Query: 185 YLDDGTIFEAIRSRTV 200
YLD GT+ A +RT
Sbjct: 227 YLDRGTLSHAFGTRTE 242
>gi|149371245|ref|ZP_01890731.1| recombination protein recR [unidentified eubacterium SCB49]
gi|149355383|gb|EDM43942.1| recombination protein recR [unidentified eubacterium SCB49]
Length = 206
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 119/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++++PG G R+A R LHL+K+ + L+E++ + + CS C
Sbjct: 2 DFSSKLLENAVNEMSQLPGIGKRTALRLVLHLLKQPKTQAIALSESIKELREDINFCSNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + R +++ VVED+ D+ A+E + YHVLGG +SP+D IGP
Sbjct: 62 HNISDVKVCEICSNPNRTKNIVCVVEDIRDVMAIENTSQYRGHYHVLGGKISPMDGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ IQSL++++ + ELIFA+S+T+EG TT YI +L+ + IT +A GI +G EL
Sbjct: 122 ELTIQSLVDKVREGVVDELIFALSSTLEGDTTNFYIFKQLEKYPITITTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYADEVTLGRSILHRIPF 199
>gi|332882716|ref|ZP_08450327.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679218|gb|EGJ52204.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 206
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 117/198 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + + ++P G R+A R LHL+K+ E+ LA+A+ + + C C
Sbjct: 2 DFSSKLLENAVYEIGQLPSIGKRTALRLALHLLKQPEEQTLQLAQALVALRTHIVYCKNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC + RD VI VVED D+ A+E + YHVLGG +SP+D I P
Sbjct: 62 HNISDVEICEICANPVRDTGVICVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+E+++ K+ ELI A+S T+EG TT YI +++ ++ I+ +A GI +G+E+
Sbjct: 122 NLHIASLVEKVKQGKVNELILALSNTMEGDTTNFYIYKQVEPYNITISTIARGIAVGAEI 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYTDEITLGRSIAHRIPF 199
>gi|170025413|ref|YP_001721918.1| recombination protein RecR [Yersinia pseudotuberculosis YPIII]
gi|186894363|ref|YP_001871475.1| recombination protein RecR [Yersinia pseudotuberculosis PB1/+]
gi|294504859|ref|YP_003568921.1| recombination protein RecR [Yersinia pestis Z176003]
gi|169751947|gb|ACA69465.1| recombination protein RecR [Yersinia pseudotuberculosis YPIII]
gi|186697389|gb|ACC88018.1| recombination protein RecR [Yersinia pseudotuberculosis PB1/+]
gi|262362923|gb|ACY59644.1| recombination protein RecR [Yersinia pestis D106004]
gi|262366844|gb|ACY63401.1| recombination protein RecR [Yersinia pestis D182038]
gi|294355318|gb|ADE65659.1| recombination protein RecR [Yersinia pestis Z176003]
Length = 191
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C + C
Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCT 60
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC++ +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L +
Sbjct: 61 ICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+ + I E+I A + T+EG TA+YI + +R+A+G+P+G EL+ +D T+
Sbjct: 121 RLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELEMVDGTTLS 180
Query: 193 EAIRSRTVL 201
++ R +
Sbjct: 181 HSLAGRNPI 189
>gi|169335256|ref|ZP_02862449.1| hypothetical protein ANASTE_01664 [Anaerofustis stercorihominis DSM
17244]
gi|169257994|gb|EDS71960.1| hypothetical protein ANASTE_01664 [Anaerofustis stercorihominis DSM
17244]
Length = 201
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 2/199 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K I NLI L+++PG G ++A R +++ ++ + L+EA+ ++ CSIC
Sbjct: 3 VYSKPILNLINELSKLPGVGRKTASRLAYYIINMEQSDVDSLSEAIKVAKKELKYCSICY 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPC IC +RD S I+VV + DL A+E++K N LYHVLGG +SP++ I ED
Sbjct: 63 NITDKDPCDICSSTKRDKSTILVVSESKDLIAIEKTKEYNGLYHVLGGVISPMEGIMVED 122
Query: 125 IGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSE 182
I I+ LI RI + E+I A +EG+TTA I LK DVK+TR+A G+P G++
Sbjct: 123 IRIKELISRIGTSDDVEEVILATGFNVEGETTAMVIKKLLKPFDDVKVTRIAKGLPQGAD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D T+ AI R +
Sbjct: 183 LEYTDGATLANAIIGRNEI 201
>gi|197103837|ref|YP_002129214.1| recombination protein recR [Phenylobacterium zucineum HLK1]
gi|229470333|sp|B4RDT6|RECR_PHEZH RecName: Full=Recombination protein recR
gi|196477257|gb|ACG76785.1| recombination protein recR [Phenylobacterium zucineum HLK1]
Length = 200
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+K+++QLL PL++A+A +V CS CG+
Sbjct: 5 AGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCSTCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT DPCAIC D RDAS+I VVE+V LWA+ER+ A YHVLGG LS LD +GP+ +
Sbjct: 65 LDTQDPCAICSDGTRDASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVGPDAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R +RE+I A+ AT++GQTTAHY+ ++L G +V ++ LA G+P+G ELD+
Sbjct: 125 RVGPLVARASEPGVREVILALPATVDGQTTAHYLAERLAGAEVTVSMLARGVPVGGELDW 184
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI +A+R+R
Sbjct: 185 LDDGTIAQAMRARRP 199
>gi|126662227|ref|ZP_01733226.1| recombination protein RecR [Flavobacteria bacterium BAL38]
gi|126625606|gb|EAZ96295.1| recombination protein RecR [Flavobacteria bacterium BAL38]
Length = 205
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 121/198 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ K +EN + ++++PG G R+A R LHL+K+ L A+A++ N + C C
Sbjct: 2 ELPSKLLENAVNEMSQLPGIGKRTALRLVLHLLKQPVDQTQGLTAALASMRNDIQYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D C IC + RD ++I VVEDV D+ A+E + +YHVLGG +SP++ IGP
Sbjct: 62 HTISDFDICGICSNLSRDKTIICVVEDVRDVMAIENTGMFKGVYHVLGGKISPIEGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I SL+E+++ + E+IFA+S+T+EG TT YI ++K VK + +A GI +G EL
Sbjct: 122 QLKINSLVEKVKNNAVSEIIFALSSTMEGDTTNFYIYKQIKDFAVKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ ++ +R
Sbjct: 182 EYADEVTLGRSLLNRIPF 199
>gi|188997275|ref|YP_001931526.1| recombination protein RecR [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932342|gb|ACD66972.1| recombination protein RecR [Sulfurihydrogenibium sp. YO3AOP1]
Length = 200
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 128/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I + I+ +I ++R+PG+G ++A+R ++L+K + L +A + +KV LC C
Sbjct: 2 NIVPETIQQVISEISRLPGYGEKTAQRLAVNLLKMPKGEAVDLVRHLALMLDKVHLCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + C +C D+ RD SVI VVE+ D + +E + + LYHVLGG LSPL+ IGPE
Sbjct: 62 GIFTEKEICDVCSDESRDRSVICVVEESFDAFMIENTGKYSGLYHVLGGRLSPLEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+SLI+RI+ ++E+IFA + T+EG+ TA+YI + +K + I+RLAYG+P G L
Sbjct: 122 KLNIKSLIDRIKKLNVKEIIFATNPTVEGEATANYIHNLIKNYPITISRLAYGLPFGGVL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ DD T+ +A+ ++ +L
Sbjct: 182 ENADDFTLAKALENKQIL 199
>gi|325474111|gb|EGC77299.1| recombination protein recR [Treponema denticola F0402]
Length = 195
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 112/194 (57%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
I+++I + +PG G +SA R HL+K+ LAEA++ ++ K+ C+ICG+
Sbjct: 2 NAIDSVIDSFSLLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEKIHPCTICGSYT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C+IC D+ RD + I VV D+ + L+HVLGG ++PL+ IGP+ + I
Sbjct: 62 EDEICSICADETRDRATICVVGFPQDVNTISSIPEYRGLFHVLGGLIAPLEGIGPDQLHI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI RI I E+I A + TIEG TTA YI L+ + V ITRLA G+P+G +L+Y D
Sbjct: 122 SELIRRIHEGGITEVILATNPTIEGDTTALYIQKILQDLPVNITRLASGLPVGGDLEYAD 181
Query: 188 DGTIFEAIRSRTVL 201
T+ ++ R
Sbjct: 182 RLTLARSLNGRIKF 195
>gi|262200016|ref|YP_003271225.1| recombination protein RecR [Haliangium ochraceum DSM 14365]
gi|262083363|gb|ACY19332.1| recombination protein RecR [Haliangium ochraceum DSM 14365]
Length = 201
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I+ L++ LAR+PG G ++A R HL++ + LA+ + + + LCS+C N+
Sbjct: 4 PIKRLVQHLARLPGIGEKTATRLAFHLIRSPASQVKDLAQTLVEVIEQTVLCSVCANITQ 63
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC IC D R+AS I VV + +D+ A++R +HVL G LSPL+ IGPED+ I
Sbjct: 64 DDPCVICRDPGREASAICVVSNPSDVVAIDRGGHFRGRFHVLHGVLSPLEGIGPEDLRID 123
Query: 129 SLIERIE-----VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
L++R++ +I E+I A SA +EG+ TA Y+ +K ++++++R+A GIP+G EL
Sbjct: 124 ELLKRLQTPAAGEPEIDEIIVATSANVEGEATAMYLARLIKPLNIRVSRIASGIPVGGEL 183
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D TI A+ R+ L
Sbjct: 184 EYSDQATIARALAGRSPL 201
>gi|118594961|ref|ZP_01552308.1| recombination protein RecR [Methylophilales bacterium HTCC2181]
gi|118440739|gb|EAV47366.1| recombination protein RecR [Methylophilales bacterium HTCC2181]
Length = 198
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 123/192 (64%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++L+ L +PG GP+SA R +L+++ + L+++++N ++ C +C +
Sbjct: 7 LQSLVDALKCLPGVGPKSALRLAYYLLQRNRKGADTLSQSISNALEQLGHCKLCNDFTEQ 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC Q+RD I +VE +DL +E++ + +Y VL G LSPLD +GP++I +
Sbjct: 67 EVCKICSSQKRDVHTICIVEMPSDLLMMEQTHSYKGMYFVLMGRLSPLDGVGPKEIHLDR 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
LIERI+ +IRE+I A + T EG TA YI + LKG ++K+TR+A G+PMG E++Y+D G
Sbjct: 127 LIERIKSSEIREIILATNFTAEGNATAQYIKELLKGAEIKMTRIARGLPMGGEIEYIDSG 186
Query: 190 TIFEAIRSRTVL 201
T+ +A+ R L
Sbjct: 187 TLAQAVVERKQL 198
>gi|298373110|ref|ZP_06983100.1| recombination protein RecR [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276014|gb|EFI17565.1| recombination protein RecR [Bacteroidetes oral taxon 274 str.
F0058]
Length = 204
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + K + +ENL+ R+PG G ++A R LHL+K+ E L ++ +V
Sbjct: 1 MNEVKYPSELLENLVNEFHRLPGVGRKTALRYALHLLKEDEADAMNLGNSILRFRAEVSK 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C +C N+ D C ICI+ +R+ +I VVE VAD+ A+E + N +YHVLGG +SP++
Sbjct: 61 CRVCNNICDNDLCEICINTKRNHRLICVVESVADVMAVENTAQFNGVYHVLGGVISPMNG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGP D+ I +L++R+ I E+I A+S +EG TT YI KL +++I+ +A G+ +
Sbjct: 121 IGPADLDIPALVQRVAEGGIDEVILALSPDMEGDTTCLYIYKKLADYNIEISTIARGVAV 180
Query: 180 GSELDYLDDGTIFEAIRSR 198
G+ L+Y D+ T+ +I +R
Sbjct: 181 GNSLEYADEITLGRSIVNR 199
>gi|302878406|ref|YP_003846970.1| recombination protein RecR [Gallionella capsiferriformans ES-2]
gi|302581195|gb|ADL55206.1| recombination protein RecR [Gallionella capsiferriformans ES-2]
Length = 196
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI L +PG GP+SA+R HL+++ + LA ++ V CS C
Sbjct: 1 MALSYLDELISALRCLPGVGPKSAQRMAYHLLQRDRKGALHLATSLERAAENVQHCSRCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N C +C RD S++ VVE AD +E+++ +Y+VL G LSPLD IG ++
Sbjct: 61 NFSELPVCGLCASAARDESLLCVVEMPADQLMIEQTQCFRGMYYVLMGRLSPLDGIGAKE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + +L+ R++ E+I A + T+EG TAHY+ L+ + VK++R+A G+P+G EL+
Sbjct: 121 LQLDNLVRRVQQHPC-EVILATNFTVEGDATAHYLATLLQSLGVKVSRIARGLPVGGELE 179
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ +A+ R L
Sbjct: 180 QVDSGTLAQAVLERREL 196
>gi|158421771|ref|YP_001523063.1| recombination protein RecR [Azorhizobium caulinodans ORS 571]
gi|172048018|sp|A8IGX4|RECR_AZOC5 RecName: Full=Recombination protein recR
gi|158328660|dbj|BAF86145.1| recombination protein [Azorhizobium caulinodans ORS 571]
Length = 201
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 153/201 (76%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++L R+PG GPRSARRATLHL+KK+E L+ PL A+ ++ K+ C
Sbjct: 1 MSRAVAGPEIERLIQLLGRLPGLGPRSARRATLHLIKKRETLMAPLGLALQDVLGKIVEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGNVD DPC +C D RD+SV++VV +VADLWALER+ A+NA YHVLGG LSPLD +
Sbjct: 61 QVCGNVDVRDPCTVCTDIHRDSSVLVVVAEVADLWALERANAINAKYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ + L+ER+ + E+I A+ AT++ QTTAHY+ D L+ VK+TRLA+G+P+G
Sbjct: 121 GPDDLNLTKLVERVGAGGVNEVILALGATVDAQTTAHYVTDLLRETGVKVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELD+LD+GT+ AIR+RT L
Sbjct: 181 GELDHLDEGTLSAAIRARTAL 201
>gi|326693437|ref|ZP_08230442.1| recombination protein RecR [Leuconostoc argentinum KCTC 3773]
Length = 201
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 115/199 (57%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG G ++A R + + E + ++A+A+ N + C +CGN
Sbjct: 3 YPEPIAKLIASYTKLPGIGQKTATRLAFYTLGMAEDDVIDFSKALASAKNDLTFCEVCGN 62
Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ +PC IC D RD + + VVE D+ A+E ++ + LYHVL G +SP GPE
Sbjct: 63 ITEKTINPCVICQDPSRDQTTVFVVEQARDVMAMENTRDYHGLYHVLNGVISPSSGTGPE 122
Query: 124 DIGIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI + SLI R+ ++I E+I + EG+ TA Y+ LK +K+TRLA+G+ +GS+
Sbjct: 123 DINLPSLIRRLSEHQEINEVIVGTNVNAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D T+ +A++ RT L
Sbjct: 183 IDYADQLTLIKAVQGRTEL 201
>gi|170722748|ref|YP_001750436.1| recombination protein RecR [Pseudomonas putida W619]
gi|229470339|sp|B1JBZ1|RECR_PSEPW RecName: Full=Recombination protein recR
gi|169760751|gb|ACA74067.1| recombination protein RecR [Pseudomonas putida W619]
Length = 200
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L +PG G ++A+R L L+++ LA+A++ V C C
Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGVRLAQALSLAMEGVGHCRQCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GP+ I
Sbjct: 63 LTEQELCPQCADTRRDDTQLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPDAI 121
Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
G+ L+ RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+
Sbjct: 122 GVPQLMARIEEQGSFTEVILATNPTVEGEATAHYIAQLLAEKGLVASRIAHGVPLGGELE 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ A R +
Sbjct: 182 LVDGGTLAHAFAGRKPI 198
>gi|304312975|ref|YP_003812573.1| Recombinational DNA repair protein (RecF pathway) [gamma
proteobacterium HdN1]
gi|301798708|emb|CBL46941.1| Recombinational DNA repair protein (RecF pathway) [gamma
proteobacterium HdN1]
Length = 198
Score = 272 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 112/195 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I L+ L ++PG GP+SA+R L L+++ + LA+A+ N V C C +
Sbjct: 4 SPAIARLVDALRQLPGVGPKSAQRMALFLLERNRRAAANLADALQNALATVRRCRQCRLL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC +RD S++ VVE AD++A+E+S A +Y VL G LSPLD IGPE +G
Sbjct: 64 CENELCEICAHSERDHSLLCVVESPADVFAIEQSGAFRGVYFVLSGRLSPLDGIGPEQLG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L R+ I ELI A SAT+EG+ TA Y+ + + TR+A G+P+G EL+ +
Sbjct: 124 LVDLQARLANGGINELILATSATLEGEATAFYLSEMANEAGITATRIAQGVPIGGELEQV 183
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A+ R L
Sbjct: 184 DSHTLSLALAGRKRL 198
>gi|110834634|ref|YP_693493.1| recombination protein RecR [Alcanivorax borkumensis SK2]
gi|123345433|sp|Q0VNM7|RECR_ALCBS RecName: Full=Recombination protein recR
gi|110647745|emb|CAL17221.1| recombination protein RecR [Alcanivorax borkumensis SK2]
Length = 200
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 109/195 (55%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ LI +PG GPRSA+R L+ + + L +A+ + V C C N
Sbjct: 4 APLVDQLINAFTCLPGVGPRSAQRMAYALLDRGRESGRRLGDALHAAMDGVQHCERCRNY 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C +C D +RDAS++ +V D+ A E+S Y VL G LSPLD IGP ++G
Sbjct: 64 AQSTLCPVCEDPRRDASLVCIVATPGDVLAFEQSGEYRGQYFVLMGELSPLDGIGPRELG 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L +R+ +I ELI A T+EG+ TAHY++ + V ++R+A G+PMG EL+++
Sbjct: 124 LDVLEQRLNEGQISELILATGTTVEGEATAHYVLGLAQDAGVGVSRIAQGVPMGGELEFV 183
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A++ R
Sbjct: 184 DGATLAQALKGRRPF 198
>gi|167719250|ref|ZP_02402486.1| recombination protein RecR [Burkholderia pseudomallei DM98]
Length = 189
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 101/185 (54%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG GP+SA+R HL++ + L ++ + C C
Sbjct: 5 PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHCEKCNT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C +C D +RD +++ VVE AD LE++ LY VL G LSPLD IGP++I
Sbjct: 65 FTEAQVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEI 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y
Sbjct: 125 HFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEY 184
Query: 186 LDDGT 190
+D GT
Sbjct: 185 VDAGT 189
>gi|119469547|ref|ZP_01612451.1| recombination protein recR [Alteromonadales bacterium TW-7]
gi|119447082|gb|EAW28352.1| recombination protein recR [Alteromonadales bacterium TW-7]
Length = 202
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ LI+ L PG GP+SA+R HL+++ + L A+ + C +C
Sbjct: 4 SDSLNQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGSALTKAMTAIGHCQMCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C IC+ +R D+ + VVE D+ A+E++ LY VL G LSP+D IGP++I
Sbjct: 64 CEQPQCDICLSTKRQDSGTLCVVESPTDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +++ I E+I A + ++EG+TTAHYI +V +R+A+GIP+G ELD
Sbjct: 124 GLDVLEQKLSQGGINEVILATNPSVEGETTAHYIAQLCHKNNVGASRIAHGIPVGGELDL 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R V
Sbjct: 184 VDGRTLMHAFSGRRV 198
>gi|83594800|ref|YP_428552.1| RecR protein [Rhodospirillum rubrum ATCC 11170]
gi|123525548|sp|Q2RNN0|RECR_RHORT RecName: Full=Recombination protein recR
gi|83577714|gb|ABC24265.1| RecR protein [Rhodospirillum rubrum ATCC 11170]
Length = 197
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 138/196 (70%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ EI+ LI +LAR+PG GPRSARRA LHL+K++E L+ PL EA+ + V LC +CG
Sbjct: 1 MSAGEIDRLIGLLARLPGLGPRSARRAALHLLKRRESLMDPLMEALGAVAASVRLCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+DT PC+IC D +RD ++I VV DVADLWALER + YHVLGG LS +D +GPED
Sbjct: 61 TLDTRAPCSICADPRRDGTLICVVRDVADLWALERGGVFSGRYHVLGGLLSAIDGVGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L R+ + E+I A+ AT+EGQTTAH I D ++ + ++ LA G+P+G ELD
Sbjct: 121 LGLDRLAARVAEGPVVEVILALPATVEGQTTAHVIADLIEPKGITVSGLAQGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLDDGT+ A+R+R
Sbjct: 181 YLDDGTLTAALRARRP 196
>gi|28198954|ref|NP_779268.1| recombination protein RecR [Xylella fastidiosa Temecula1]
gi|182681663|ref|YP_001829823.1| recombination protein RecR [Xylella fastidiosa M23]
gi|32129945|sp|Q87CK8|RECR_XYLFT RecName: Full=Recombination protein recR
gi|28057052|gb|AAO28917.1| recombination protein RecR [Xylella fastidiosa Temecula1]
gi|182631773|gb|ACB92549.1| recombination protein RecR [Xylella fastidiosa M23]
gi|307580099|gb|ADN64068.1| recombination protein RecR [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 198
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C
Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHMLEREREGGQRLADVLSRAIEKIGHCTECR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP +
Sbjct: 61 DFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+
Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD GT+ A +RT
Sbjct: 181 YLDRGTLSHAFGTRTE 196
>gi|170742369|ref|YP_001771024.1| recombination protein RecR [Methylobacterium sp. 4-46]
gi|238688006|sp|B0UP43|RECR_METS4 RecName: Full=Recombination protein recR
gi|168196643|gb|ACA18590.1| recombination protein RecR [Methylobacterium sp. 4-46]
Length = 201
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 118/201 (58%), Positives = 152/201 (75%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI++LAR+PG GPRSARRA L L+KK++ LLGPLAEAM ++ C
Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKRDTLLGPLAEAMRVASERIVTC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVDT DPC IC D RD S+++VVEDV+DLWALERS AV A YHVLGG LS LD I
Sbjct: 61 RECGNVDTCDPCTICRDHGRDPSMLVVVEDVSDLWALERSGAVTARYHVLGGILSALDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PE++ + L+ER V ++RE+I A+SAT++GQTTAHY+ + L + VK+T+LA+G+P+G
Sbjct: 121 RPENLNLARLVERASVPEMREIILALSATVDGQTTAHYVTELLAHLPVKVTKLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR RT
Sbjct: 181 GELDYLDEGTLSAAIRQRTAF 201
>gi|308048900|ref|YP_003912466.1| recombination protein RecR [Ferrimonas balearica DSM 9799]
gi|307631090|gb|ADN75392.1| recombination protein RecR [Ferrimonas balearica DSM 9799]
Length = 199
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LIK L +PG GPRSA+R T L+++ L EA++ + V C C
Sbjct: 3 FSPRVDELIKALQCLPGVGPRSAQRMTFQLLERDRVAGTRLGEALSRAMSDVGHCQDCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC + +R + + VVE ADL A+E S + Y VL G LSPLD IGP+D
Sbjct: 63 FTEQTRCPICDNPRRAEKGQLCVVESPADLLAIESSGQYDGRYFVLMGHLSPLDGIGPDD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L + +E+I A + T+EG TA YI D + +++++R+A+G+P+G EL
Sbjct: 123 IGLDVLDRMLAEGPWQEIILATNPTVEGDATAQYIADMARQREIRVSRIAHGVPVGGELG 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R +
Sbjct: 183 YVDGTTLALSFSGRRDI 199
>gi|113475124|ref|YP_721185.1| recombination protein RecR [Trichodesmium erythraeum IMS101]
gi|110166172|gb|ABG50712.1| DNA replication and repair protein RecR [Trichodesmium erythraeum
IMS101]
Length = 182
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GP++A+R L+++K+ E + LAEA+ + K+ LC C ++ C IC + Q
Sbjct: 1 MPGVGPKTAQRLALYIIKRPEAEIQALAEALVDARKKIGLCQKCFHLSAEPICEICRNPQ 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
RD VI VV D DL ALE+++ YHVLGG +SP+D IGPE + IQ L+ R+ + I
Sbjct: 61 RDKEVICVVCDSRDLIALEKTREYKGQYHVLGGVISPMDGIGPEQLSIQPLVRRVSQENI 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
+E+I AIS ++EG+TT Y+ L+ K+TR+A+G+PMG +L+Y D+ T+ A+ R
Sbjct: 121 QEVIIAISPSVEGETTTLYVGQLLRPF-TKVTRIAFGLPMGGDLEYADELTLARALEGRQ 179
Query: 200 VL 201
L
Sbjct: 180 EL 181
>gi|328950358|ref|YP_004367693.1| Recombination protein recR [Marinithermus hydrothermalis DSM 14884]
gi|328450682|gb|AEB11583.1| Recombination protein recR [Marinithermus hydrothermalis DSM 14884]
Length = 197
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ LAR+PG GP+SA++ L+L + + L +A+ + +V C CGN
Sbjct: 3 YPNALLQLVRSLARLPGVGPKSAQKLALYLAQH-AEAAETLEQALRGVRERVRPCVRCGN 61
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D RD VI VVE DL A+E+S N +YHVLGG+L+PL+ IGPED+
Sbjct: 62 LAEAELCPVCADPGRDHGVICVVETPGDLLAIEKSGEYNGVYHVLGGALNPLEGIGPEDL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ER+ + ++E+I A S T+EG+ TA Y+ + LK ++ TR AYG+P+G L+Y
Sbjct: 122 RVAELLERL--EGVQEVILATSMTVEGEATAGYLAELLKARGLRATRPAYGLPVGGALEY 179
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ R
Sbjct: 180 VDEVTLARALAHRRAF 195
>gi|319944207|ref|ZP_08018483.1| recombination protein R [Lautropia mirabilis ATCC 51599]
gi|319742502|gb|EFV94913.1| recombination protein R [Lautropia mirabilis ATCC 51599]
Length = 198
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 114/193 (59%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ LI L +PG GPRSARR HL+++ L+E +A +V CS C +
Sbjct: 4 PAALDELILALRGLPGVGPRSARRLAFHLLQRDRDAARRLSEGLAQALERVRHCSRCNTL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D+ R+ +++ VVE+ AD +E ++A LY+VL G LSPLD IGP D+
Sbjct: 64 TEHELCDICSDETRNPALLCVVENPADQLVIEHTRAYQGLYYVLMGRLSPLDGIGPSDLQ 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L+ R +RE++ A + T EG+ TAHY+ + L + ++R A G+P+G EL+Y+
Sbjct: 124 FERLLARATDGVVREVVLATNFTQEGEATAHYLSEVLTARGLSVSRPARGVPLGGELEYV 183
Query: 187 DDGTIFEAIRSRT 199
D T+ +A+R R
Sbjct: 184 DAATVAQALRDRR 196
>gi|71275383|ref|ZP_00651669.1| RecR protein [Xylella fastidiosa Dixon]
gi|71898555|ref|ZP_00680726.1| RecR protein [Xylella fastidiosa Ann-1]
gi|170730360|ref|YP_001775793.1| recombination protein RecR [Xylella fastidiosa M12]
gi|71163683|gb|EAO13399.1| RecR protein [Xylella fastidiosa Dixon]
gi|71731679|gb|EAO33739.1| RecR protein [Xylella fastidiosa Ann-1]
gi|167965153|gb|ACA12163.1| recombination protein RecR [Xylella fastidiosa M12]
Length = 198
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C
Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP +
Sbjct: 61 DFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+
Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD GT+ A +RT
Sbjct: 181 YLDRGTLSHAFGTRTE 196
>gi|103485745|ref|YP_615306.1| recombination protein RecR [Sphingopyxis alaskensis RB2256]
gi|123380172|sp|Q1GWJ9|RECR_SPHAL RecName: Full=Recombination protein recR
gi|98975822|gb|ABF51973.1| recombination protein RecR [Sphingopyxis alaskensis RB2256]
Length = 198
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 99/196 (50%), Positives = 145/196 (73%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L++ LAR+PG GPRSARRA LHL+KK+E PL A+ + ++ C+ CG
Sbjct: 1 MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPCAIC D +RDA + VVE+V+DLWAL++S+ YHVLGG LS L+ + P+D
Sbjct: 61 NIDTHDPCAICADPRRDARSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+ I E++ A++AT+EGQTTAHY+ ++L+G V++T+LA+G+P+G ELD
Sbjct: 121 LSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLEGYPVRLTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|257091958|ref|YP_003165599.1| recombination protein RecR [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044482|gb|ACV33670.1| recombination protein RecR [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 200
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 117/196 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E+LI+ L +PG GP+SA+R HL++ LA+A+ + C C
Sbjct: 3 APSSLESLIEALRCLPGVGPKSAQRMAYHLMQHDRPGADRLADALQLALAALRHCQRCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T+ C+ C+ +RD S + VVE D+ +E++ A + LY+VL G +SPLD IGP ++
Sbjct: 63 FTETEICSRCLSAKRDPSQLCVVETPVDMNMMEQTHAYSGLYYVLMGRVSPLDGIGPAEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ R +RE+I A + T EG+ TAHY+ + L+ V ++R+A G+P+G EL+Y
Sbjct: 123 HLERLLARCGDGLVREVIIATNYTNEGEATAHYLSEMLRSRGVSVSRIARGVPVGGELEY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ +A+R R L
Sbjct: 183 VDSGTLAQALRERRPL 198
>gi|311745661|ref|ZP_07719446.1| recombination protein RecR [Algoriphagus sp. PR1]
gi|126575099|gb|EAZ79449.1| recombination protein RecR [Algoriphagus sp. PR1]
Length = 205
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 123/198 (62%), Gaps = 3/198 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I K IE+ + ++R+PG G ++A R LHL+K+ E L A+ + +V C IC
Sbjct: 2 NIPSKLIEDAVTEISRLPGIGKKTALRLALHLLKQSEVHTEALTLALTRMREEVQYCKIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C+IC +RD VI VVED+ D+ A+E + LYHVLGG +SP+ IGPE
Sbjct: 62 HNISDDEHCSICKSHRRDHGVICVVEDIRDVLAIENTDQYQGLYHVLGGVISPIQGIGPE 121
Query: 124 DIGIQSLIER---IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
++ I+SLIER + ++E+I A+S T+EG TT+ Y+ +L +K++ +A GIP+G
Sbjct: 122 ELTIESLIERVSTDSEEPVKEVIMALSGTMEGDTTSFYLAKRLHEKGIKVSTIARGIPVG 181
Query: 181 SELDYLDDGTIFEAIRSR 198
EL+Y D+ T+ +I +R
Sbjct: 182 GELEYTDEITLGRSIMTR 199
>gi|189502035|ref|YP_001957752.1| recombination protein RecR [Candidatus Amoebophilus asiaticus 5a2]
gi|229485580|sp|B3ES21|RECR_AMOA5 RecName: Full=Recombination protein recR
gi|189497476|gb|ACE06023.1| hypothetical protein Aasi_0625 [Candidatus Amoebophilus asiaticus
5a2]
Length = 200
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 122/194 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
T K IE I ++ +PG G ++A R L L+K + LA ++ + +++ C C
Sbjct: 3 YTSKLIEEAINEISALPGIGKKTALRLVLFLLKSNPEQTERLATSLHKLRSQIQYCQKCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T C+IC + RD +I VVE++ D+ A+E + +YHVLGG +SP++ IGPE
Sbjct: 63 NISDTTLCSICANPHRDTGLICVVENIQDVIAIENTAQYKGIYHVLGGLISPVEGIGPEQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L++R++ ++ +E+IFA+S TIEG TT YI KLK VK++ +A G+ +GSEL+
Sbjct: 123 LYIEHLVQRVQQEQPQEIIFALSTTIEGDTTTFYITKKLKEFPVKLSNIARGVAVGSELE 182
Query: 185 YLDDGTIFEAIRSR 198
Y D+ T+ +I+ R
Sbjct: 183 YTDEMTLARSIKER 196
>gi|209965589|ref|YP_002298504.1| recombination protein RecR, putative [Rhodospirillum centenum SW]
gi|209959055|gb|ACI99691.1| recombination protein RecR, putative [Rhodospirillum centenum SW]
Length = 201
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 152/201 (75%), Gaps = 4/201 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EI+ LI++LA++PG GPRSARRA LHL+KK++ L+ PLAEAMA + CS+CG
Sbjct: 1 MIGPEIDRLIQLLAKLPGLGPRSARRAALHLIKKRDSLMEPLAEAMAAAAAGIRTCSVCG 60
Query: 65 NVDTTDPCAICIDQQR----DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
N+DT DPC +C D +R D + + VVE+V DLWALER+ A LYHVLGG+LS L+ +
Sbjct: 61 NLDTGDPCHVCRDGERPGGRDRTTLCVVEEVGDLWALERTGAYRGLYHVLGGTLSALEGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ + L+ER ++ E+I A++AT+ GQTTAHY+ D+L+G +V+I+RLA+G+P+G
Sbjct: 121 GPDDLNVPKLLERASRPEVTEVILALNATVGGQTTAHYLADRLEGCEVRISRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGT+ A+R+R L
Sbjct: 181 GELDYLDDGTLTAALRARRSL 201
>gi|319953940|ref|YP_004165207.1| recombination protein recr [Cellulophaga algicola DSM 14237]
gi|319422600|gb|ADV49709.1| Recombination protein recR [Cellulophaga algicola DSM 14237]
Length = 205
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 129/198 (65%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + ++++PG G R+A R LHL+K+ E+ L A+ + +++ CS C
Sbjct: 2 EFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPEEQTSHLTSALGKLRSQIKFCSNC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + +RDA++I VVED+ D+ A+E + LYHVLGG +SP++ +GP+
Sbjct: 62 HNISDVALCEICANSKRDAAIICVVEDIRDVMAIENTGQFRGLYHVLGGKISPMECVGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+E+++ + ELIFA+S+T+EG TT YI +L+G+ VK + +A GI +G EL
Sbjct: 122 DLTIVSLVEKVKKGGVSELIFALSSTMEGDTTNFYIFKQLEGVTVKTSTIARGIAVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSILNRIPF 199
>gi|298244235|ref|ZP_06968041.1| recombination protein RecR [Ktedonobacter racemifer DSM 44963]
gi|297551716|gb|EFH85581.1| recombination protein RecR [Ktedonobacter racemifer DSM 44963]
Length = 203
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 4/199 (2%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L++ A++PG G ++A+R T +++ LAEA+ + + CS C N+
Sbjct: 5 APPVAALVEEFAKLPGIGVKTAQRLTFFILRSPNDHARRLAEAIIRVKESIIYCSRCFNI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
TDPC IC + R+ V+ VVE+ D+ ALE++ A LYHVL G+LSP++ IG +++
Sbjct: 65 TETDPCPICGNPSREQDVVCVVEEPLDVLALEKTGAYKGLYHVLHGALSPMNGIGRKELR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTA----HYIMDKLKGIDVKITRLAYGIPMGSE 182
I L++R++ + IRE+IFA + EG TA YI ++L ++ +T LA G+P+G +
Sbjct: 125 IDELLKRLDHEHIREVIFATNPGFEGDYTAGSIKLYIKNELNLPELHMTSLARGLPIGGD 184
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D T+ AI R L
Sbjct: 185 LEYADQDTLGRAIEGRREL 203
>gi|289662389|ref|ZP_06483970.1| recombination protein RecR [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669154|ref|ZP_06490229.1| recombination protein RecR [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 197
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 112/194 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI+ +PG G +SA+R H+++++ + LA +AN KV C C +
Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G
Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|269467850|gb|EEZ79593.1| recombinational DNA repair protein, RecF pathway [uncultured SUP05
cluster bacterium]
Length = 194
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 114/190 (60%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE+L K +PG G ++A+R HL+++ + LA+A+ + V CS C +
Sbjct: 2 IESLNKAFCTLPGVGSKTAQRFVYHLLERNREGGLDLAKALVDAMEHVKHCSSCRTLSEK 61
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C IC + RD+S + ++E D+ A+E+S Y VL G LSP+D IG ++G+
Sbjct: 62 TICDICANDVRDSSQLCIIETPTDIHAIEKSGVYKGKYFVLSGYLSPIDGIGAAELGLDE 121
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L ++++ + I E+I A +AT+EG+ TAHYI + K DVKITR+A+GIP+G EL+Y D
Sbjct: 122 LEQKLKDQAIEEIILATNATVEGEVTAHYISNMAKQFDVKITRIAHGIPIGGELEYADIN 181
Query: 190 TIFEAIRSRT 199
TI A+ R
Sbjct: 182 TIAHALSGRK 191
>gi|189423438|ref|YP_001950615.1| recombination protein RecR [Geobacter lovleyi SZ]
gi|229890151|sp|B3E1K3|RECR_GEOLS RecName: Full=Recombination protein recR
gi|189419697|gb|ACD94095.1| recombination protein RecR [Geobacter lovleyi SZ]
Length = 197
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 127/195 (65%), Gaps = 2/195 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L+ L ++PG G R+A R HL+K + L LAEA+ + +VC CS+C +
Sbjct: 5 APTLTRLVGELKKLPGIGERTALRLAFHLLKSPQNLG-SLAEALTQVQERVCACSVCFAL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+PC IC RD+SVI VVE D+ ALERS A + YHVL G++SPL + P+D+
Sbjct: 64 TEQNPCPICS-GGRDSSVICVVETSQDMLALERSNAYHGSYHVLQGAISPLHGVNPDDLR 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I+ L+ RIE K+ E++ A + T+EG+TTA Y+ +LK + +++TRLA+GIP+GS+++++
Sbjct: 123 IRELLMRIEQGKVEEVVIATNFTVEGETTALYLARQLKPLGIRVTRLAHGIPLGSDIEFV 182
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A++ R+ L
Sbjct: 183 DPATVQWAMKGRSEL 197
>gi|71900521|ref|ZP_00682650.1| RecR protein [Xylella fastidiosa Ann-1]
gi|71729697|gb|EAO31799.1| RecR protein [Xylella fastidiosa Ann-1]
Length = 198
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 115/196 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI +PG G ++A+R H+++++ + LA+ + K+ C+ C
Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLGRAIEKIGHCTECR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP +
Sbjct: 61 DFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+
Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD GT+ A +RT
Sbjct: 181 YLDRGTLSHAFGTRTE 196
>gi|157375985|ref|YP_001474585.1| recombination protein RecR [Shewanella sediminis HAW-EB3]
gi|189029376|sp|A8FX84|RECR_SHESH RecName: Full=Recombination protein recR
gi|157318359|gb|ABV37457.1| recombination protein RecR [Shewanella sediminis HAW-EB3]
Length = 199
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI+ L +PG GP+SA+R L+++ + LA+A+A+ + V C C
Sbjct: 3 FSPLVDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGQTLAQALASAMSDVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
C IC +R S I VVE AD+ A+E + Y VL G LSPLD +GPE+
Sbjct: 63 FTEESHCPICASNKRGQSEQICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L E + + ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+
Sbjct: 123 LGLSLLEEHLCSGGVSELILATNPTVEGDATAHFIADMAKVHNVSVSRIAHGVPVGGELE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ + R +
Sbjct: 183 YVDSTTLALSFNGRLPI 199
>gi|319936702|ref|ZP_08011115.1| recombination protein recR [Coprobacillus sp. 29_1]
gi|319808259|gb|EFW04824.1| recombination protein recR [Coprobacillus sp. 29_1]
Length = 197
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 113/196 (57%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
E L++ +PG G + A R H++ + + ++A+ + + + C CG+
Sbjct: 3 YPNSFEELVECFKMLPGIGTKGAERMVYHILAMDDDQIQRFSQALIDFKSNIQYCQRCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC+DQQRD + I VVE D++A+E+ K LYHVL G++S +D +D+
Sbjct: 63 ICEGELCEICLDQQRDQTTICVVESPKDVFAMEKLKEYRGLYHVLHGTMSIMDGKTIDDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
IQ+L +R+ + I+E+I A + T EG+TTA ++ L ++ +R+A G+P+G LDY
Sbjct: 123 NIQTLFDRL-DENIKEVIIATNPTREGETTALFLAKLLAKQNIPASRIANGLPIGGNLDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +++ R L
Sbjct: 182 ADELTLLKSLEGRKKL 197
>gi|38232884|ref|NP_938651.1| recombination protein RecR [Corynebacterium diphtheriae NCTC 13129]
gi|73621480|sp|Q6NJY0|RECR_CORDI RecName: Full=Recombination protein recR
gi|38199142|emb|CAE48766.1| recombination protein [Corynebacterium diphtheriae]
Length = 218
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R HL+ + + L +A+ I + V C IC
Sbjct: 1 MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D RD S I VVE+ D+ +ER+ YHVLGGSL PL IGP +
Sbjct: 61 NISREEVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRE 120
Query: 125 IGIQSLIERIE--------------------VKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I L++RI ++RE+I A EG+ TA Y+ L+
Sbjct: 121 LNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVILATDPNTEGEATASYLARLLR 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+ ++RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL 218
>gi|190573047|ref|YP_001970892.1| recombination protein RecR [Stenotrophomonas maltophilia K279a]
gi|190010969|emb|CAQ44578.1| putative recombination protein RecR [Stenotrophomonas maltophilia
K279a]
Length = 199
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 116/197 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI L +PG G ++A+R HL++++ + LAE +A ++ C C
Sbjct: 1 MSAPLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAETLALAVERIGHCVQCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP +
Sbjct: 61 DFSETELCPTCANGSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G++ L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+
Sbjct: 121 LGLEQLERRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D GT+ A +R+
Sbjct: 181 YVDRGTLSHAFGTRSEF 197
>gi|91788141|ref|YP_549093.1| recombination protein RecR [Polaromonas sp. JS666]
gi|122967827|sp|Q12B97|RECR_POLSJ RecName: Full=Recombination protein recR
gi|91697366|gb|ABE44195.1| DNA replication and repair protein RecR [Polaromonas sp. JS666]
Length = 208
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 12/205 (5%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E L + L ++PG G +SA R HL++ + +A A+ + N V C++C +
Sbjct: 4 SNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLCNTL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ CA C + QRD S + VVE AD ALER+ A LY VL G LSPLD IGP DIG
Sbjct: 64 TEQEVCATCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPNDIG 123
Query: 127 IQSLIER------------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174
+Q L +R ++++E+I A + T EG+ TAH I LK V++TRLA
Sbjct: 124 LQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQVTRLA 183
Query: 175 YGIPMGSELDYLDDGTIFEAIRSRT 199
G+P+GSEL+Y+D GTI A+ R
Sbjct: 184 RGVPVGSELEYVDLGTIAHALVDRR 208
>gi|223983489|ref|ZP_03633675.1| hypothetical protein HOLDEFILI_00955 [Holdemania filiformis DSM
12042]
gi|223964661|gb|EEF68987.1| hypothetical protein HOLDEFILI_00955 [Holdemania filiformis DSM
12042]
Length = 197
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K E LI+ +PG G ++A R ++ ++ + A+A+ + N + C ICG
Sbjct: 1 MYPKSFERLIECFQLLPGVGAKTAERYAFTMLDAPQEQIDLFAQALISCKNDIKRCRICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC ++ R++ +I VV+ D+ A+E+ + +YHVL G +S I PED
Sbjct: 61 NISDQDECPICQNEDRNSRMICVVQSPKDVIAMEKMQEYAGVYHVLNGLISTSKGIMPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ERI + E+I A +ATIEG+TTA Y+ L G V +TR+A+G+PMG LD
Sbjct: 121 LNIDALLERI-TPETEEVIIATNATIEGETTALYLDKLLSGKGVLVTRIAHGLPMGGHLD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +A R L
Sbjct: 180 YADELTLIKAFEGRKSL 196
>gi|284046732|ref|YP_003397072.1| recombination protein RecR [Conexibacter woesei DSM 14684]
gi|283950953|gb|ADB53697.1| recombination protein RecR [Conexibacter woesei DSM 14684]
Length = 212
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 12/208 (5%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++ LI L R+PG G R+A+R HL++ E+ LAEA+ + ++ LC +C N
Sbjct: 4 FAPPVQRLITELGRLPGIGGRTAQRLAFHLLRASEEDALALAEAIKEVKARIGLCEVCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC D++RDA ++ VVE+ +D+ +ER+ + YHVLGG+LSP+D I PED+
Sbjct: 64 LSDGPRCRICSDERRDAGLVCVVEEPSDIIPIERTHEFHGRYHVLGGALSPIDGIDPEDL 123
Query: 126 GIQSLIERIEVK----------KIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRL 173
I L R+ IRE++ A + T G+ TA +I L+ V +TRL
Sbjct: 124 RIAELYTRVTPPADAPQDEHPTPIREVVLATNPTTTGEATALHIAAHLREQAPQVTVTRL 183
Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A G+P+G++L+Y D+ T+ A+ R L
Sbjct: 184 ASGLPVGADLEYADELTLGRALSGRRAL 211
>gi|313622075|gb|EFR92664.1| recombination protein RecR [Listeria innocua FSL J1-023]
Length = 172
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 108/170 (63%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
+++ KE + A+A+ + + CS+CG++ DPC IC D RD SV+ VV++
Sbjct: 2 LAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICSDTSRDRSVLCVVQE 61
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150
D+ A+E+ + + LYHVL G++SP+D IGPEDI I L++R++ I E+I A + +
Sbjct: 62 SKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNV 121
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
EG+ TA YI L+ +K+TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 122 EGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRRE 171
>gi|323345662|ref|ZP_08085885.1| recombination protein R [Prevotella oralis ATCC 33269]
gi|323093776|gb|EFZ36354.1| recombination protein R [Prevotella oralis ATCC 33269]
Length = 203
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 125/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ +E + +++PG G ++A R LHL+++ + + + A+ + + C
Sbjct: 1 MDQQYPSALLEKAVNEFSKLPGIGRKTALRLVLHLLRRSNEDVETFSTAITTMKQHIKYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C N+ TD C+IC D RDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D I
Sbjct: 61 NVCHNISDTDVCSICSDSHRDASTICVVENIQDVMAVENTQQFRGLYHVLGGIISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ER+ I E+I A+S+T+EG TT YI KL+ VK++ +A GI +G
Sbjct: 121 GPNDLEINSLVERVMQGGIDEIILALSSTMEGDTTNFYISRKLQSFPVKLSVIARGISVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 181 DELEYTDEVTLGRSILNRTPF 201
>gi|85373242|ref|YP_457304.1| recombination protein RecR [Erythrobacter litoralis HTCC2594]
gi|122545155|sp|Q2NCT4|RECR_ERYLH RecName: Full=Recombination protein recR
gi|84786325|gb|ABC62507.1| recombinational DNA repair protein [Erythrobacter litoralis
HTCC2594]
Length = 198
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 103/196 (52%), Positives = 142/196 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L LVKK++ L L EA+ + +++ C CG
Sbjct: 1 MASQEIEQLASTLARLPGLGPRSARRAVLWLVKKRDTALPALLEALEGVQDRLVECDTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT +PC IC D +RD I VVEDVADLWAL+R++ YHVLGG LS LD + PED
Sbjct: 61 NVDTQNPCGICADPRRDRKSICVVEDVADLWALDRARLFTGRYHVLGGKLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ R+E I E++ A++AT+EGQTT+HYI ++L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LNIANLLGRVEEGGIDEVVLAMNATLEGQTTSHYIAERLEEFPVRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|237755840|ref|ZP_04584438.1| recombination protein RecR [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692005|gb|EEP61015.1| recombination protein RecR [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 200
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 127/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I+ +I ++R+PG+G ++A+R ++L+K + L +A + +KV LC C
Sbjct: 2 NLVPDSIQQVISEISRLPGYGEKTAQRLAVNLLKMPKGEAVDLVRHLALMLDKVHLCREC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + C +C D+ RD SVI VVE+ D + +E + N LYHVLGG LSPL+ IGPE
Sbjct: 62 GIFTEKEICDVCSDESRDRSVICVVEESFDAFMIENTDKYNGLYHVLGGRLSPLEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I+SLI+RI+ ++E+IFA + T+EG+ TA+YI + +K + I+RLAYG+P G L
Sbjct: 122 KLNIKSLIDRIKKLNVKEIIFATNPTVEGEATANYIHNLIKNYPITISRLAYGLPFGGIL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ DD T+ +A+ ++ +L
Sbjct: 182 ENADDFTLAKALENKQIL 199
>gi|167648528|ref|YP_001686191.1| recombination protein RecR [Caulobacter sp. K31]
gi|189029356|sp|B0T1T2|RECR_CAUSK RecName: Full=Recombination protein recR
gi|167350958|gb|ABZ73693.1| recombination protein RecR [Caulobacter sp. K31]
Length = 200
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/195 (50%), Positives = 137/195 (70%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +L+++PG GPRS RRA L L+KK++ LL PL A+ + KV CS+CG+
Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLTAALVDAQAKVRTCSVCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT+DPCAIC D RD ++ VVE+V LWA+ER + YHVLGG LS LD +GPE +
Sbjct: 65 LDTSDPCAICSDAARDNRLLCVVEEVGSLWAMERGGSFKGRYHVLGGLLSALDGVGPEAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R + ++ E+I A+ AT++GQTTAHY+ D+L V +T LA G+P+G +LD+
Sbjct: 125 RVGELLGRAKGGEVSEVILALPATVDGQTTAHYLADRLAPTGVSVTMLARGVPVGGDLDW 184
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI +A+R+R
Sbjct: 185 LDDGTIAQALRARRP 199
>gi|148266339|ref|YP_001233045.1| recombination protein RecR [Geobacter uraniireducens Rf4]
gi|189029364|sp|A5G9K4|RECR_GEOUR RecName: Full=Recombination protein recR
gi|146399839|gb|ABQ28472.1| DNA replication and repair protein RecR [Geobacter uraniireducens
Rf4]
Length = 197
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 121/195 (62%), Gaps = 2/195 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + L+ L ++P G ++A R HL+K E L LA+++ + + V CS C +
Sbjct: 5 SRSLTKLLGELKKLPSVGDKTALRLAFHLLKSPEN-LSALAKSLLEVRDGVRFCSTCFGI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+DPC +C RD + I VVE+ D+ A+ERS+A YHVL G+LSPL+ + P +
Sbjct: 64 TESDPCHLCTTP-RDDASICVVEEPQDILAMERSQAFKGRYHVLHGALSPLNGVTPGQLR 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L++R+E ++E++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y+
Sbjct: 123 IAELLQRLENGSVKEVLLATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPIGSDLEYV 182
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A+ R+ L
Sbjct: 183 DAATVQRAVEGRSEL 197
>gi|222053484|ref|YP_002535846.1| recombination protein RecR [Geobacter sp. FRC-32]
gi|254790769|sp|B9LZ13|RECR_GEOSF RecName: Full=Recombination protein recR
gi|221562773|gb|ACM18745.1| recombination protein RecR [Geobacter sp. FRC-32]
Length = 197
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L+ L ++PG G ++A R HL+K + L LAE++ + V CS+C
Sbjct: 4 FSRSLTRLLGELKKLPGVGDKTALRLAFHLLKSPDN-LTALAESLLEVKAGVRFCSVCFG 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC +C +RD + I VVE+ D+ A+ERS+A YHVL G+LSPL+ I P D+
Sbjct: 63 ITEDDPCHLCS-TERDRTTICVVEEPQDILAMERSRAFKGRYHVLHGALSPLNGITPGDL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+E IRE++ A + T+EG+ TA Y+ +K + +++TRLA+GIP+GS+L++
Sbjct: 122 KIAELMKRLESGAIREVLIATNFTVEGEATALYLTRLIKPLSIRVTRLAHGIPLGSDLEF 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D T+ A+ R+ L
Sbjct: 182 IDAATVQRAVEGRSEL 197
>gi|223939213|ref|ZP_03631095.1| recombination protein RecR [bacterium Ellin514]
gi|223892166|gb|EEF58645.1| recombination protein RecR [bacterium Ellin514]
Length = 200
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 120/195 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ I L IL+R+PG GPRSA R LHLV+ + LA+ + ++ C ICG++
Sbjct: 5 PEPITTLTGILSRLPGIGPRSAERLALHLVQSDVSEVKQLAQILVEARERIQTCPICGSL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
PC+IC D++RD +I +VE D+ ++E+S + YHVLGG +SPL+ +GPED+
Sbjct: 65 TEQTPCSICSDERRDGGLICLVERPTDIISIEKSGTFHGRYHVLGGKISPLNGVGPEDLR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L R+ + I+E++ A+ +EG T++Y+ KL ++I+R+A+G+P GS L++
Sbjct: 125 ISELESRLSQEPIKEIVVALGTDVEGDATSNYLAKKLARPGLRISRIAHGLPAGSGLEFA 184
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ R +
Sbjct: 185 DELTLTHALAGRREM 199
>gi|25026767|ref|NP_736821.1| recombination protein RecR [Corynebacterium efficiens YS-314]
gi|259508096|ref|ZP_05750996.1| RecR protein [Corynebacterium efficiens YS-314]
gi|73621481|sp|Q8FU10|RECR_COREF RecName: Full=Recombination protein recR
gi|23492046|dbj|BAC17021.1| putative recombination protein [Corynebacterium efficiens YS-314]
gi|259164319|gb|EEW48873.1| RecR protein [Corynebacterium efficiens YS-314]
Length = 218
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R HL+ + L +A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPDDITRLQDALGAVRDGVRFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D RD +I VVE+ D+ +ER+ YHVLGG+L PL +GP +
Sbjct: 61 NISRDEVCRICNDSGRDRGLICVVEEPKDIQVIERTGEFRGRYHVLGGALDPLANVGPRE 120
Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++RI + +I E+I A EG+ TA Y+ L+
Sbjct: 121 LTISTLLQRIGGVLDDRELADSTPDTPLLDDKPQIHEVILATDPNTEGEATASYLARLLQ 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+ ++RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLPL 218
>gi|163789127|ref|ZP_02183570.1| recombination protein RecR [Flavobacteriales bacterium ALC-1]
gi|159875540|gb|EDP69601.1| recombination protein RecR [Flavobacteriales bacterium ALC-1]
Length = 205
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 125/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +EN + +A++PG G R+A R LHL+++ E L+EA++ + ++ C C
Sbjct: 2 EFSSKLLENAVNEMAQLPGIGKRTALRLVLHLLRQPENQTFQLSEALSKVRGEINFCKSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC + R+ +I VVED+ D+ A+E + + LYHVLGG +SP+D IGP+
Sbjct: 62 HNISDKPLCEICENPNRNTQLICVVEDIRDVMAVENTSSFKGLYHVLGGKISPMDGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL+E+++ +++ELIFA+S T+EG TT YI +++ +V + +A G+ G+EL
Sbjct: 122 DLNIMSLVEKVKTGQVKELIFAMSPTMEGDTTNFYIFRQIQDYNVATSTIARGVAAGNEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I R
Sbjct: 182 EYTDEITLGRSIIDRVPF 199
>gi|163857864|ref|YP_001632162.1| recombination protein RecR [Bordetella petrii DSM 12804]
gi|229890129|sp|A9HZ10|RECR_BORPD RecName: Full=Recombination protein recR
gi|163261592|emb|CAP43894.1| recombination protein RecR [Bordetella petrii]
Length = 202
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 1/201 (0%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M ++ + + +LI+ L R+PG G RSARR HL++ Q L A+A +
Sbjct: 1 MDPQLPEPEPLVSLIEALRRLPGVGVRSARRMAYHLMQHDLQGADMLGRALAGAVQNLRH 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + D CA C + +RD SV+ VVE AD +E S LY+VL G ++PL+
Sbjct: 61 CARCNSFTEDDICATCANPKRDPSVLCVVETPADQNMIEASHGYRGLYYVLMGRVAPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
IGP ++ Q L+ER +RE+I A + T EG+TTAH++ + L G +K+TRLA G+P
Sbjct: 121 IGPRELDFQRLLERASDGVVREVILATNFTAEGETTAHFLGEVLAGKGLKVTRLARGVPA 180
Query: 180 GSELDYLDDGTIFEAIRSRTV 200
GSEL+Y+D GTI A+ R
Sbjct: 181 GSELEYVDAGTIAWALMERKS 201
>gi|159903630|ref|YP_001550974.1| RecR protein [Prochlorococcus marinus str. MIT 9211]
gi|159888806|gb|ABX09020.1| RecR protein [Prochlorococcus marinus str. MIT 9211]
Length = 182
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E+ + A A+ N N+V C C ++ + C IC++Q
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEERIKAFANALLNARNQVGQCQQCFHLTEGNECEICLNQN 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R ++I VV D DL ALER++ LYHVLGG +SP+D IGPE + I L++RI ++
Sbjct: 61 RQRNLICVVADSRDLLALERTREYKGLYHVLGGLISPMDGIGPELLNISPLVKRITSEET 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
E+I A++ ++EG TT+ Y+ L VK+TR+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 TEVILALTPSVEGDTTSLYLAKLLNAF-VKVTRIAYGLPVGSELEYADEVTLARALEGRR 179
Query: 200 V 200
Sbjct: 180 T 180
>gi|85857925|ref|YP_460127.1| recombination protein [Syntrophus aciditrophicus SB]
gi|123517947|sp|Q2LYF5|RECR_SYNAS RecName: Full=Recombination protein recR
gi|85721016|gb|ABC75959.1| recombination protein [Syntrophus aciditrophicus SB]
Length = 203
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 115/194 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I++LI L ++PG G ++A R +H+++ E LA+++ + +K+ C +C N
Sbjct: 4 YPLPIKHLISELGKLPGIGEKTATRLAMHILRAPEGDARALADSILEVRDKIRFCRVCYN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C +C D RD+S I VVED L A+E S + + YHVL G LSPLD IGPE +
Sbjct: 64 FSEAELCTVCRDSARDSSQICVVEDPDALMAIEDSGSYSGTYHVLHGVLSPLDGIGPEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L+ERI +RE+I A + + G +TA I + + V +TR+A G+PMGS+L Y
Sbjct: 124 KLRELVERIRESGVREVILATNPNVSGDSTALLISRMIGPLAVTVTRIAQGVPMGSDLRY 183
Query: 186 LDDGTIFEAIRSRT 199
+D T+ +++ R
Sbjct: 184 MDRMTLSKSLEFRR 197
>gi|313900839|ref|ZP_07834329.1| recombination protein RecR [Clostridium sp. HGF2]
gi|312954259|gb|EFR35937.1| recombination protein RecR [Clostridium sp. HGF2]
Length = 198
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K+ E L++ R+PG G ++A R ++ ++ + A N + C++CG
Sbjct: 1 MYPKKFEALVECYRRLPGVGIKTAERYAFQTLEWDDETMDSWIHAFQNAKEGLKKCAVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC DQ R++ +I VV+ D+ A+E++K + +YHVL G +S I PED
Sbjct: 61 NLSEDDTCDICGDQSRNSQIICVVQSPKDVIAMEKTKEYSGVYHVLNGVISTSKGILPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I I SL+ RI + +I A + T+EG+TTA Y+ L+ V +TR+A+G+PMG LD
Sbjct: 121 INIDSLLNRISEETEE-IIIATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +AI R +
Sbjct: 180 YADELTLIKAIEGRKKM 196
>gi|300780023|ref|ZP_07089879.1| recombination protein R [Corynebacterium genitalium ATCC 33030]
gi|300534133|gb|EFK55192.1| recombination protein R [Corynebacterium genitalium ATCC 33030]
Length = 211
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 14/211 (6%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R HL+K + + L A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLKTDPEDIDRLRAALGAVRDGVTFCRICS 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV + C +C D RDA +I VVED D+ +ER+ YHVLGG+L PL +GP+D
Sbjct: 61 NVSREEVCRVCADSGRDAGLICVVEDAKDIQVIERTGEYTGRYHVLGGALDPLANVGPKD 120
Query: 125 IGIQSLIERIEV-------------KKIRELIFAISATIEGQTTAHYIMDKLKGID-VKI 170
+ I SL++RI +I E+I A EG+ TA Y+ LK + +
Sbjct: 121 LSISSLLQRIGGVLPDRDPDDADSIPEIHEVILATDPDTEGEATASYLARLLKDFPELTV 180
Query: 171 TRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+RLA G+P+G +L+++D+ T+ A+ R L
Sbjct: 181 SRLASGMPLGGDLEFVDELTLSRALSGRLTL 211
>gi|20139818|sp|Q9PCH1|RECR_XYLFA RecName: Full=Recombination protein recR
Length = 198
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 116/196 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C
Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP +
Sbjct: 61 DFSETKICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+
Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD GT+ A +RT
Sbjct: 181 YLDRGTLSHAFGTRTE 196
>gi|332535327|ref|ZP_08411126.1| recombination protein RecR [Pseudoalteromonas haloplanktis ANT/505]
gi|332035240|gb|EGI71747.1| recombination protein RecR [Pseudoalteromonas haloplanktis ANT/505]
Length = 202
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ LI+ L PG GP+SA+R HL+++ + L A+ + C C
Sbjct: 4 SDSLNQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAIGHCQSCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C IC+ +R D+ ++ VVE D+ A+E++ LY VL G LSP+D IGP++I
Sbjct: 64 CEQAQCDICLSTKRQDSGILCVVESPTDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +++ I E+I A + T+EG TTAHYI V +R+A+GIP+G ELD
Sbjct: 124 GLDVLEQKLAQGDINEVILATNPTVEGDTTAHYIAQLCHKYKVGASRIAHGIPVGGELDL 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R +
Sbjct: 184 VDGRTLMHAFSGRRL 198
>gi|114799985|ref|YP_759100.1| recombination protein RecR [Hyphomonas neptunium ATCC 15444]
gi|123323639|sp|Q0C593|RECR_HYPNA RecName: Full=Recombination protein recR
gi|114740159|gb|ABI78284.1| recombination protein RecR [Hyphomonas neptunium ATCC 15444]
Length = 201
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 108/199 (54%), Positives = 144/199 (72%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ G E+ LI ++A++PG GPRSARR LHL+K+ + LL PLAEA+A K+ C
Sbjct: 1 MSQRSAGPELLRLIDLIAKLPGLGPRSARRVALHLLKRNDTLLKPLAEALAEAGAKIQKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CGN DT PCA+C RD +I VVEDV DLWALER + YHVLGG+LS +D I
Sbjct: 61 ATCGNFDTVQPCAVCQMPGRDDGIICVVEDVPDLWALERGGSFRGRYHVLGGALSAIDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+GI SL+ R++ +RE+I A++AT++GQTTAHY+ D L G V +TRLA+G+P+G
Sbjct: 121 GPEDLGIASLVARVDAGGVREVILALNATVDGQTTAHYVADLLAGKGVDVTRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRT 199
ELD+LDDGT+ A+RSR
Sbjct: 181 GELDHLDDGTLAAALRSRR 199
>gi|255324354|ref|ZP_05365473.1| recombination protein RecR [Corynebacterium tuberculostearicum
SK141]
gi|311741091|ref|ZP_07714916.1| recombination protein R [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298573|gb|EET77871.1| recombination protein RecR [Corynebacterium tuberculostearicum
SK141]
gi|311303893|gb|EFQ79971.1| recombination protein R [Corynebacterium pseudogenitalium ATCC
33035]
Length = 218
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGAVRDGVTFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP D
Sbjct: 61 NISREDVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPRD 120
Query: 125 IGIQSLIER--------------------IEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++R I E+I A EG+ TA Y++ L+
Sbjct: 121 LNISTLLQRLGGVLPDRELADSTPEAPLYDATPTIHEVILATDPNTEGEATAAYLVRLLR 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+KITRLA G+P+G +L+++D+ T+ A+ R +
Sbjct: 181 DFPDLKITRLASGMPLGGDLEFVDELTLSRALSGRLTI 218
>gi|255532916|ref|YP_003093288.1| recombination protein RecR [Pedobacter heparinus DSM 2366]
gi|255345900|gb|ACU05226.1| recombination protein RecR [Pedobacter heparinus DSM 2366]
Length = 205
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 117/197 (59%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E+ + +++PG G ++A R LHL+ K+++ + + + ++ CS+C
Sbjct: 2 NFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVDHFGNVLIRLRKEIKHCSVC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC +R+ +I VVED D+ A+E + +YHVLGG +SP+D IGP
Sbjct: 62 HNISDQHTCNICTAGKREKELICVVEDTRDVMAVENTGQYFGVYHVLGGLISPMDGIGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I SL++R+ ++E+I A+SAT+EG TT Y+ +LK + IT +A GI G EL
Sbjct: 122 DLFIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGEL 181
Query: 184 DYLDDGTIFEAIRSRTV 200
+Y D+ T+ +I +R
Sbjct: 182 EYADEITLGRSIVTRVP 198
>gi|226226520|ref|YP_002760626.1| recombination protein RecR [Gemmatimonas aurantiaca T-27]
gi|226089711|dbj|BAH38156.1| recombination protein RecR [Gemmatimonas aurantiaca T-27]
Length = 199
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 123/196 (62%), Gaps = 4/196 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+ L LAR+PG G ++A R T HL+++ LA+A+ + +V C C N+ +
Sbjct: 4 IDELTNELARLPGIGRKTALRLTYHLLRQPASQCRNLADALVALTERVRSCERCHNLTES 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C +C D +RDA+ + VVE +D+ ++ER+ LYHVLGG LSPLD +GP+D+ +
Sbjct: 64 TLCHLCADPRRDAATLCVVEQASDIASIERAGEFRGLYHVLGGRLSPLDGVGPDDLHVAD 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG----IDVKITRLAYGIPMGSELDY 185
L+ R+E + +RE+I A + ++EG+ TA Y+ +L G +++TR+A G+P+G +L+Y
Sbjct: 124 LLARLEAEGVREVILATNPSLEGEATALYVQRQLAGSASSHAIRVTRIARGLPVGGDLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D TI +AI +R +
Sbjct: 184 ADGVTIAQAIAARREM 199
>gi|134094279|ref|YP_001099354.1| recombination protein RecR [Herminiimonas arsenicoxydans]
Length = 185
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 71/184 (38%), Positives = 110/184 (59%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP+SA+R HL++ L A++ +V C++C + C C+
Sbjct: 1 MRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNTFTESAVCETCL 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D +R+A+++ VVE D +E++ LY VL G LSPLD IGP+DI ++ LI R
Sbjct: 61 DAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDIHLEKLISRATD 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y+D GTI A+
Sbjct: 121 GIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAML 180
Query: 197 SRTV 200
R
Sbjct: 181 DRRT 184
>gi|302381705|ref|YP_003817528.1| recombination protein RecR [Brevundimonas subvibrioides ATCC 15264]
gi|302192333|gb|ADK99904.1| recombination protein RecR [Brevundimonas subvibrioides ATCC 15264]
Length = 200
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 141/195 (72%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+KK+EQLL PLA ++A KV CSICG
Sbjct: 5 AGPEIERLIALLAKLPGLGPRSARRAALALLKKREQLLEPLAASLAETAAKVVSCSICGT 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DT DPC+IC D RD +I VVE+ LWA+ERS A YHVLGG LS LD +GPE +
Sbjct: 65 PDTRDPCSICSDGARDNGLICVVEEAGSLWAMERSGAFRGKYHVLGGLLSALDGVGPEAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ R++ ++RE++ A+ AT++GQTTAHY+ +++ G V++T LA G+P+G +LD+
Sbjct: 125 RVAELVGRVKGGEVREVVLALPATVDGQTTAHYLAERVAGNGVEVTSLARGVPVGGDLDW 184
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI +A+R+R
Sbjct: 185 LDDGTIVQALRARRP 199
>gi|227484860|ref|ZP_03915176.1| recombination protein RecR [Anaerococcus lactolyticus ATCC 51172]
gi|227237220|gb|EEI87235.1| recombination protein RecR [Anaerococcus lactolyticus ATCC 51172]
Length = 201
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 122/195 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + + NLI+ ++P G +SA R + +V + + + ++++ + ++ C ICG
Sbjct: 3 ILPESLNNLIEQFQKLPTIGRKSAERLAMSIVDEDAKSVEDFSKSLIEVKKRIHHCKICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D RD + +VEDV +L A+E+S A YHVLGG +SP D I P+
Sbjct: 63 NLTEEDTCNICKDFTRDDEYLCIVEDVRNLIAIEKSGAYRGKYHVLGGLISPSDDISPDK 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I LI+R++ + I+E+I AIS+TIEG+TT +I + LKG ++KI+++A GIP+GS L+
Sbjct: 123 LNIDKLIKRLDTEDIKEIILAISSTIEGETTILFITNLLKGRNIKISKIAQGIPVGSHLE 182
Query: 185 YLDDGTIFEAIRSRT 199
Y D T+ A+ R
Sbjct: 183 YFDQLTLERALEDRR 197
>gi|87124741|ref|ZP_01080589.1| RecR protein [Synechococcus sp. RS9917]
gi|86167620|gb|EAQ68879.1| RecR protein [Synechococcus sp. RS9917]
Length = 190
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
I+ R+PG GPR+A+R LHL+++ E+ + AEA+ +V C C ++ C
Sbjct: 2 IEQFERLPGIGPRTAQRLALHLLRQPEEQIQSFAEALLAARRQVGQCQTCFHLSAEPTCE 61
Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
IC + +R S ++ VV D DL ALER++ YHVLGG +SP+D IGPE + + SL++
Sbjct: 62 ICRNPERGTSGLLCVVADSRDLLALERTREYAGRYHVLGGLISPMDGIGPEMLQVSSLVQ 121
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192
R+E + E+I A++ ++EG TT+ Y+ L+ +++R+AYG+P+GSEL+Y DD T+
Sbjct: 122 RVERESTAEVILALTPSVEGDTTSLYLARLLRPF-TRVSRIAYGLPVGSELEYADDVTLS 180
Query: 193 EAIRSRTV 200
A+ R
Sbjct: 181 RALEGRRE 188
>gi|213968920|ref|ZP_03397060.1| recombination protein RecR [Pseudomonas syringae pv. tomato T1]
gi|301385358|ref|ZP_07233776.1| recombination protein RecR [Pseudomonas syringae pv. tomato Max13]
gi|302061232|ref|ZP_07252773.1| recombination protein RecR [Pseudomonas syringae pv. tomato K40]
gi|302133131|ref|ZP_07259121.1| recombination protein RecR [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213926219|gb|EEB59774.1| recombination protein RecR [Pseudomonas syringae pv. tomato T1]
gi|330879118|gb|EGH13267.1| recombination protein RecR [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330967861|gb|EGH68121.1| recombination protein RecR [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|331015906|gb|EGH95962.1| recombination protein RecR [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 200
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA A+ + V C +C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRLCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCSDLRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERISQQATFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|150025368|ref|YP_001296194.1| recombination protein RecR [Flavobacterium psychrophilum JIP02/86]
gi|172048609|sp|A6GZ60|RECR_FLAPJ RecName: Full=Recombination protein recR
gi|149771909|emb|CAL43383.1| Recombination protein RecR [Flavobacterium psychrophilum JIP02/86]
Length = 206
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 120/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + K +E + +A++PG G R+A R L+L+K+ + LA+++ + + C C
Sbjct: 2 EFSSKLLEKAVNEMAQLPGIGKRTALRLVLYLLKQPKDRTDFLAQSLLTMREGIIFCENC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ C IC ++ R+ ++ VVEDV D+ A+E + +YHVLGG +SP+D +GP
Sbjct: 62 HNISDVAVCEICSNKNRNHQIVCVVEDVRDVMAIENTGQFRGVYHVLGGKISPIDGVGPS 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I SL+E+++ + E+IFA+S+T+EG TT YI ++K ++ + +A GI +G EL
Sbjct: 122 QLNISSLVEKVKSGSVSEIIFALSSTMEGDTTNFYIYKQIKDCEIITSSIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSILNRIPF 199
>gi|300704435|ref|YP_003746038.1| recombination protein recr [Ralstonia solanacearum CFBP2957]
gi|299072099|emb|CBJ43431.1| Recombination protein recR [Ralstonia solanacearum CFBP2957]
Length = 207
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGAARLAEALAEAAESIRHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +R ASV+ VVE AD +E++ Y VL G LSPLD IGP++I
Sbjct: 68 FTEQDVCETCLDPRRAASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127
Query: 126 GIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G
Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GTI A+ R L
Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207
>gi|52842955|ref|YP_096754.1| recombination protein RecR [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|73621495|sp|Q5ZRX0|RECR_LEGPH RecName: Full=Recombination protein recR
gi|52630066|gb|AAU28807.1| recombinational DNA repair protein RecR [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 199
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 120/197 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+T + L++ L +PG GP+SA+R HL++ + Q LA + + C C
Sbjct: 1 MTMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N CA+C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+D
Sbjct: 61 NYTEQTLCALCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IG+ L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL+
Sbjct: 121 IGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+LD TI A+++R V+
Sbjct: 181 FLDGNTISSALKNRAVI 197
>gi|118578741|ref|YP_899991.1| recombination protein RecR [Pelobacter propionicus DSM 2379]
gi|166221951|sp|A1AKR3|RECR_PELPD RecName: Full=Recombination protein recR
gi|118501451|gb|ABK97933.1| DNA replication and repair protein RecR [Pelobacter propionicus DSM
2379]
Length = 197
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 2/195 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ L+ L ++PG G R+A R HL+K + L L+E++ + ++V CSIC +
Sbjct: 5 PSALSRLVGELKKLPGVGERTALRLAFHLLKTPQN-LTALSESLLEVKSRVRSCSICFAI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPCAIC RD I VVE+ DL ALERS A + YHVL G +SPL IGP ++
Sbjct: 64 TEDDPCAICA-GDRDTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSELR 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L+ RI + E++ A + T+EG+ TA Y+ LK + ++I+RLA+GIP+GS+++Y+
Sbjct: 123 IAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIEYV 182
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A++ R L
Sbjct: 183 DAATVQWALQGRNQL 197
>gi|124003953|ref|ZP_01688800.1| recombination protein RecR [Microscilla marina ATCC 23134]
gi|123990532|gb|EAY30012.1| recombination protein RecR [Microscilla marina ATCC 23134]
Length = 200
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 121/196 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K IE+ + +A +PG G ++A R HL+K+ E+ L + + + + C+ C
Sbjct: 3 FSSKLIEDAVDQIAGLPGIGKKTALRLVFHLLKQDEKSTVALTDTLLKLRRDIVYCNQCH 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++ T C IC +RD +++ VVED D+ A+E + LYHVLGG +SP++ + P D
Sbjct: 63 HISDTPTCNICNSNKRDRTLLCVVEDSQDVLAIENTAQYQGLYHVLGGVISPMEGVSPID 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ER+ +I+E+IFA+S T+EG TT Y+ KL+ +KI+ +A G+P+GSEL+
Sbjct: 123 LHITSLLERVAKSEIKEVIFALSPTMEGDTTTFYLTKKLREHQIKISTIARGVPIGSELE 182
Query: 185 YLDDGTIFEAIRSRTV 200
Y D+ T+ +I RT
Sbjct: 183 YTDEITLGRSIIGRTT 198
>gi|114704407|ref|ZP_01437315.1| recombination protein RecR [Fulvimarina pelagi HTCC2506]
gi|114539192|gb|EAU42312.1| recombination protein RecR [Fulvimarina pelagi HTCC2506]
Length = 201
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 166/201 (82%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I G EIE LI++LA++PG GPRSARRA LHLVKK+E +L PL AMA+ KV C
Sbjct: 1 MAKSIAGPEIERLIQLLAKLPGLGPRSARRAALHLVKKREPILRPLTAAMADALEKVGEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CGN+DT+DPC IC D RD SV++VVEDV+DLWALER+KA+NA YHVLGG LSPL+ I
Sbjct: 61 SVCGNIDTSDPCTICRDPARDQSVVVVVEDVSDLWALERAKALNAAYHVLGGVLSPLEGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I+ L+ER+ +++EL+ A++AT+EGQTTAHY+MD+L+G+DV+ TRLA+G+P+G
Sbjct: 121 GPEDLTIRQLVERVSKGEVKELVIAVNATVEGQTTAHYLMDQLEGLDVRATRLAHGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ A+RSRT L
Sbjct: 181 GELDYLDEGTLSAAMRSRTAL 201
>gi|77360146|ref|YP_339721.1| recombination protein recR [Pseudoalteromonas haloplanktis TAC125]
gi|123589320|sp|Q3IKN2|RECR_PSEHT RecName: Full=Recombination protein recR
gi|76875057|emb|CAI86278.1| recombination protein recR [Pseudoalteromonas haloplanktis TAC125]
Length = 202
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ LI+ L PG GP+SA+R HL+++ + L A+ V C C
Sbjct: 4 SASLTQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAVGHCESCRTF 63
Query: 67 DTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C IC+ +R D+ ++ VVE +D+ A+E++ LY VL G LSP+D IGP++I
Sbjct: 64 CEQSQCDICLSTKRQDSGILCVVESPSDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L ++ I E+I A + T+EG+TTAHYI V +R+A+GIP+G ELD
Sbjct: 124 GLDVLETKLAQSGISEVILATNPTVEGETTAHYIAQLCHKYKVGASRIAHGIPVGGELDL 183
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A R
Sbjct: 184 VDGTTLMHAFSGRRA 198
>gi|291613734|ref|YP_003523891.1| recombination protein RecR [Sideroxydans lithotrophicus ES-1]
gi|291583846|gb|ADE11504.1| recombination protein RecR [Sideroxydans lithotrophicus ES-1]
Length = 199
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 117/195 (60%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E LIK L +PG GP+SA+R HL+++ Q LA ++ + V CS C N
Sbjct: 3 TPSSLEELIKALRCLPGVGPKSAQRMAYHLLQRDRQGALHLARSLDQAVSSVRHCSKCNN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C +C Q+R+ ++ VVE ADL +E+++ +Y VL G LSPLD +G +D+
Sbjct: 63 FSEEDVCPMCRSQRRETDMLCVVEMPADLLMMEQAQCYRGMYFVLMGRLSPLDGLGAKDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L++R E+I A + TIEG+ TAHY+ L+ +K++R+A G+P+G EL++
Sbjct: 123 PLERLLKRARELSC-EVILATNFTIEGEATAHYLATLLRAQGLKVSRIARGLPVGGELEH 181
Query: 186 LDDGTIFEAIRSRTV 200
+D GT+ +A+ R
Sbjct: 182 VDSGTLAQAVLERRT 196
>gi|306835000|ref|ZP_07468049.1| recombination protein R [Corynebacterium accolens ATCC 49726]
gi|304569120|gb|EFM44636.1| recombination protein R [Corynebacterium accolens ATCC 49726]
Length = 219
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 121/214 (56%), Gaps = 21/214 (9%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+
Sbjct: 6 PLQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGGVRDGVTFCRICCNISR 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP+D+ I
Sbjct: 66 EDVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPKDLNIS 125
Query: 129 SLIER--------------------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-D 167
+L++R + IRE+I A EG+ TA Y++ L+ D
Sbjct: 126 TLLQRLGGVLPDRELADSTPEAPLYDDTPTIREVILATDPNTEGEATAAYLVRLLRDFPD 185
Query: 168 VKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+KITRLA G+P+G +L+++D+ T+ A+ R +
Sbjct: 186 LKITRLASGMPLGGDLEFVDELTLSRALSGRLTI 219
>gi|227502439|ref|ZP_03932488.1| recombination protein RecR [Corynebacterium accolens ATCC 49725]
gi|227076808|gb|EEI14771.1| recombination protein RecR [Corynebacterium accolens ATCC 49725]
Length = 219
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 21/214 (9%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+
Sbjct: 6 PLQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGGVRDGVTFCRICCNISR 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP+D+ I
Sbjct: 66 EDVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPKDLNIS 125
Query: 129 SLIER--------------------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-D 167
+L++R + I E+I A EG+ TA Y++ L+ D
Sbjct: 126 TLLQRLGGVLPDRELADSTPEAPLYDDTPTIHEVILATDPNTEGEATAAYLVRLLRDFPD 185
Query: 168 VKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+KITRLA G+P+G +L+++D+ T+ A+ R +
Sbjct: 186 LKITRLASGMPLGGDLEFVDELTLSRALSGRLTI 219
>gi|330837780|ref|YP_004412421.1| DNA replication and repair protein RecR [Spirochaeta coccoides DSM
17374]
gi|329749683|gb|AEC03039.1| DNA replication and repair protein RecR [Spirochaeta coccoides DSM
17374]
Length = 196
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++NLI+ L+R+PG GP+SA R HL+K Q LA+++ I + V C +CG+
Sbjct: 2 NTLDNLIQALSRLPGIGPKSAARIGYHLIKTNPQYNKELAKSIGTIQDVVFPCPVCGSYT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
PC C D RD ++ VVE D+ + S + N LYHVLGG++SPLD IGPED+
Sbjct: 62 EISPCRFCSDSSRDRELLCVVEQPQDVVTISTSGSYNGLYHVLGGAISPLDGIGPEDLSF 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYL 186
SL+ RI +E+I A + T EG TTA YI +K D+ +TRLA G+P+G +L+Y
Sbjct: 122 DSLMRRISEGSFQEVIIATNPTEEGDTTAMYIRHLMKDFPDIILTRLASGLPIGGDLEYA 181
Query: 187 DDGTIFEAIRSRTVL 201
D T+ ++R R
Sbjct: 182 DRLTLARSLRGRIKF 196
>gi|145294361|ref|YP_001137182.1| recombination protein RecR [Corynebacterium glutamicum R]
gi|172044393|sp|A4QAN3|RECR_CORGB RecName: Full=Recombination protein recR
gi|140844281|dbj|BAF53280.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 218
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R HL+ + L EA+ + + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D RD I VVE+ D+ +ER+ + YHVLGG+L PL IGP +
Sbjct: 61 NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE 120
Query: 125 IGIQSLIERIE--------------------VKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++RI +RE+I A EG+ TA Y+ LK
Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+ ++RLA G+P+G +L+++D+ T+ A+ R +
Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI 218
>gi|255535694|ref|YP_003096065.1| recombination protein RecR [Flavobacteriaceae bacterium 3519-10]
gi|255341890|gb|ACU08003.1| Recombination protein RecR [Flavobacteriaceae bacterium 3519-10]
Length = 225
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 114/195 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + ++ ++ +PG G +SA R LHL+K+ E L +++ + ++ C C
Sbjct: 24 DYPSKVLAKAVEEISGLPGIGKKSALRLALHLLKQPETQAVALGDSLKKLVTEIKYCREC 83
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N + C IC + +R +I VVEDV D+ A+E + Y VLGG +SP++ IGP
Sbjct: 84 HNFSDHEVCDICANPKRTEEIICVVEDVRDVMAIENTGKYRGKYLVLGGKISPMEGIGPN 143
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I S+ +++E +E+IFA+SAT+EG TTA+YI K K V + +A GI +G EL
Sbjct: 144 QLNISSIGKKLEKAGAKEIIFALSATMEGDTTAYYIYRKFKDSGVNFSTIARGISVGDEL 203
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ ++ +I++R
Sbjct: 204 EYADEISLGRSIQNR 218
>gi|300775556|ref|ZP_07085417.1| recombination protein R [Chryseobacterium gleum ATCC 35910]
gi|300505583|gb|EFK36720.1| recombination protein R [Chryseobacterium gleum ATCC 35910]
Length = 203
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 115/195 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + + ++ +PG G ++A R LHL+K+ L ++ N+ N++ C C
Sbjct: 2 DYPSKVLAKAVDEISGLPGIGRKTALRLALHLLKQPSSRAVSLGNSLINLVNEIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N D C IC +++R+ +I +VEDV D+ A+E + Y +LGG +SP++ +GP
Sbjct: 62 HNFSDFDVCEICSNEKRNGELICIVEDVRDVIAIENTGKYTGKYLILGGKISPMEGVGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I S+ +++ K++E IFA+SAT+EG TTA+YI K K +V + +A GI +G EL
Sbjct: 122 QLNIPSIEKKLNEGKVKEFIFALSATMEGDTTAYYIYKKFKNFNVNFSSIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ ++ +I +R
Sbjct: 182 EYADEISLGRSIINR 196
>gi|300857564|ref|YP_003782547.1| recombination protein [Corynebacterium pseudotuberculosis FRC41]
gi|300685018|gb|ADK27940.1| recombination protein [Corynebacterium pseudotuberculosis FRC41]
gi|302205304|gb|ADL09646.1| Recombination protein RecR [Corynebacterium pseudotuberculosis
C231]
gi|302329858|gb|ADL20052.1| Recombination protein RecR [Corynebacterium pseudotuberculosis
1002]
gi|308275544|gb|ADO25443.1| Recombination protein RecR [Corynebacterium pseudotuberculosis I19]
Length = 218
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R HL+ + + L +A+ + + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLHVEPADIARLQDALGAVRDGVTFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC D RD I VVE+ D+ +ER+ N YHVLGG+L PL IGP +
Sbjct: 61 NISRESVCRICADSGRDRGTICVVEEPKDIQVIERTGEYNGRYHVLGGALDPLANIGPRE 120
Query: 125 IGIQSLIERIE--------------------VKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++RI + E+I A EG+ TA Y+ L+
Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPDAPLYDSSPTVTEVILATDPNTEGEATASYLARLLR 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+ ++RLA G+P+G +L+++D+ T+ A+ R +
Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTI 218
>gi|328954116|ref|YP_004371450.1| Recombination protein recR [Desulfobacca acetoxidans DSM 11109]
gi|328454440|gb|AEB10269.1| Recombination protein recR [Desulfobacca acetoxidans DSM 11109]
Length = 201
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 120/198 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + ++ +I+ L+R PG G ++A R L+L++ + + LA+A+ ++ K+ LC
Sbjct: 1 MARNFYPAPLQKVIRGLSRWPGIGEKTATRLALYLLRAADTEVTELAQALIDLKAKIRLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C + C IC D R+ ++VV D DL ALER YHVLGG +SPLD +
Sbjct: 61 SRCFAFADQELCPICADPGRNNGQLVVVADPGDLIALERVGFFQGAYHVLGGLISPLDNV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I L+ R+ + I E+I A++ ++EG+ T Y+ +L+G VK+TR+AYG+PMG
Sbjct: 121 GPRDLHISELLSRLHSEAIEEVILALNPSLEGEATTAYLAQELQGKPVKVTRIAYGLPMG 180
Query: 181 SELDYLDDGTIFEAIRSR 198
+L Y D TI E++R R
Sbjct: 181 GDLKYADQQTIKESLRHR 198
>gi|19551495|ref|NP_599497.1| recombination protein RecR [Corynebacterium glutamicum ATCC 13032]
gi|62389142|ref|YP_224544.1| recombination protein RecR [Corynebacterium glutamicum ATCC 13032]
gi|24212182|sp|Q8NTQ8|RECR_CORGL RecName: Full=Recombination protein recR
gi|21323008|dbj|BAB97637.1| Recombinational DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|41324475|emb|CAF18815.1| DNA repair protein (RecF pathway) [Corynebacterium glutamicum ATCC
13032]
Length = 218
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+SA+R HL+ + L EA+ + + V C IC
Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICC 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D RD I VVE+ D+ +ER+ + YHVLGG+L PL IGP +
Sbjct: 61 NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE 120
Query: 125 IGIQSLIERIE--------------------VKKIRELIFAISATIEGQTTAHYIMDKLK 164
+ I +L++RI +RE+I A EG+ TA Y+ LK
Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK 180
Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
D+ I+RLA G+P+G +L+++D+ T+ A+ R +
Sbjct: 181 DFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI 218
>gi|94271396|ref|ZP_01291948.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|93450456|gb|EAT01636.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
Length = 203
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ +E LI ++PG G +SA R LHL+++ LA ++ ++ + +CS C
Sbjct: 2 NVIPPALERLIADFGKLPGIGRKSATRLALHLLRRPALEAQGLARSLHELHQLITMCSSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
DPC IC + RDAS++ VVE+ DL A+E++ + YH+L G+LSP+D IGP+
Sbjct: 62 CAFSEEDPCEICRNPGRDASLVCVVEEPGDLLAIEKTSSYKGRYHILHGALSPMDGIGPK 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGS 181
++ I L+ERI+ +++RE++ A S+T+ G+ TA Y++D+L+ V++TRLAYGIPMG
Sbjct: 122 ELKIGLLLERIKREQVREVLIATSSTVPGEATASYLIDQLQQHTTGVRLTRLAYGIPMGM 181
Query: 182 ELDYLDDGTIFEAIRSRTV 200
++ Y D+ T+ AI +R
Sbjct: 182 DIKYADELTLARAIETRQE 200
>gi|297616249|ref|YP_003701408.1| recombination protein RecR [Syntrophothermus lipocalidus DSM 12680]
gi|297144086|gb|ADI00843.1| recombination protein RecR [Syntrophothermus lipocalidus DSM 12680]
Length = 197
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +E LI L ++PG GP+SA+R L ++K + + LA AM KV CS CGN+
Sbjct: 4 ARPLEKLIDELLKLPGIGPKSAQRLALFILKMEPSEVRRLAAAMIEAREKVFPCSRCGNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC +C D++RD SVI VVE+ D+ ++ER+ LY+VL ++ E +
Sbjct: 64 TDQDPCWVCADEKRDESVICVVEEAGDVMSIERTG-YRGLYYVLNQEPHLMEEGALEKLK 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L++ ++ +++E+I A + T++G+ A YI +K VKITR A+G+P+G +++Y
Sbjct: 123 LAGLLDMVDKGRVKEIILATNPTVDGELVARYIAGMVKAKGVKITRPAHGLPVGGDIEYS 182
Query: 187 DDGTIFEAIRSRTVL 201
D T+ +A+ R +
Sbjct: 183 DALTLRKALEGRQEI 197
>gi|124026189|ref|YP_001015305.1| RecR protein [Prochlorococcus marinus str. NATL1A]
gi|123961257|gb|ABM76040.1| RecR protein [Prochlorococcus marinus str. NATL1A]
Length = 182
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E + +EA+ N ++V C C ++ + C IC+++Q
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEDKIRLFSEALLNAKSQVGQCKTCFHLTAGEQCEICLNKQ 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R+ +I VV + DL ALER++ LYHV+GG +SP+D IGPE + I SLI+R++ I
Sbjct: 61 RNQELICVVSESRDLLALERTREYKGLYHVIGGLISPMDGIGPEMLEISSLIKRVDKANI 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
+E+I A++ +IEG TT+ Y+ LK K+TR+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 KEVILALTPSIEGDTTSLYVGRLLKPF-TKVTRIAYGLPVGSELEYADEVTLSRALEGRR 179
Query: 200 VL 201
L
Sbjct: 180 DL 181
>gi|296393612|ref|YP_003658496.1| recombination protein RecR [Segniliparus rotundus DSM 44985]
gi|296180759|gb|ADG97665.1| recombination protein RecR [Segniliparus rotundus DSM 44985]
Length = 212
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 116/202 (57%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++LI L+R+PG GP+ A+R HLV + + L A+A I + V C ICG
Sbjct: 1 MFEGPVQDLIDELSRLPGVGPKGAQRIAFHLVGSPKPEIDRLVSALAKIRDGVRFCDICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C +C D +RD + I VV D+ A+ER++ + YHVLGG+L+PL IGP+
Sbjct: 61 NIAADVTCRVCADARRDLTRICVVSQPKDVAAIERTREFHGRYHVLGGALNPLAGIGPDR 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ ++ L+ R+ + E+I A EG+ TA Y+ L D+++TRLA G+PM
Sbjct: 121 LRVKELLTRLGASADGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R L
Sbjct: 181 GGDLEFADEMTLGRALAGRRAL 202
>gi|114770076|ref|ZP_01447614.1| recombination protein RecR [alpha proteobacterium HTCC2255]
gi|114548913|gb|EAU51796.1| recombination protein RecR [alpha proteobacterium HTCC2255]
Length = 198
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 102/195 (52%), Positives = 142/195 (72%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++I+ LI ++A++PG GPRSARRA LHL+KK++ LL PL++A+ N+ C CGN
Sbjct: 3 NNQDIDILIALMAKLPGLGPRSARRAVLHLIKKRDILLSPLSDAIYNVAQTARECLSCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+DT D C ICI+ +R I VVEDV+DLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 IDTKDICEICINSKRGNGQICVVEDVSDLWAMERSNVFKGRYHVLGGNLSALDGIGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R++ + I E+I A++AT++GQTTAHYI D+L +DV +T LA G+P+G ELDY
Sbjct: 123 RIPHLVKRVKGENINEIILALNATVDGQTTAHYIADQLDEMDVAVTSLAQGVPIGGELDY 182
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI A+ +R
Sbjct: 183 LDDGTISAALNARKS 197
>gi|257125660|ref|YP_003163774.1| recombination protein RecR [Leptotrichia buccalis C-1013-b]
gi|257049599|gb|ACV38783.1| recombination protein RecR [Leptotrichia buccalis C-1013-b]
Length = 198
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K++++LI + A++PG G +SA R +++K E + + E + + + + C ICGN+
Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLEKSEADIDRMLEIIKDSHTNIKHCEICGNLS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC +++RD VI VVE V D+ A E+S+ N LYHVLGG + PL+ + ED+ +
Sbjct: 62 ENDICEICANEKRDKEVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNL 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R+ ++E+I A++ +EG+TT+ Y+ LK +VKI+++A GIPMG ++Y D
Sbjct: 122 MKLMRRL-DGNVKEIILALNPDLEGETTSLYLTKFLKDKNVKISKIASGIPMGGNIEYTD 180
Query: 188 DGTIFEAIRSR 198
T+ ++ R
Sbjct: 181 MATLGRSLEGR 191
>gi|331011125|gb|EGH91181.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 200
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+ +P+G ELD
Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHRVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|28870795|ref|NP_793414.1| recombination protein RecR [Pseudomonas syringae pv. tomato str.
DC3000]
gi|37999576|sp|Q87Z00|RECR_PSESM RecName: Full=Recombination protein recR
gi|28854044|gb|AAO57109.1| recombination protein RecR [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 200
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA A+ + V C +C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRLCRT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +R+ +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 63 LTEEELCPQCSDLRRNDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121
Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 122 GIPQLMERISQQATFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 182 LVDGGTLAHSFAGRKPI 198
>gi|296141675|ref|YP_003648918.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162]
gi|296029809|gb|ADG80579.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162]
Length = 215
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++ LI LA++PG GPR A+R HL+ + + L A+ + + V C +CG
Sbjct: 1 MYEGPVQELIDELAKLPGVGPRGAQRIAFHLLGAQPSEIDRLTHALTRVRDDVRYCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RDAS I VVE+ D+ A+ER++ LYHVLGG+L+P+ IGP+
Sbjct: 61 NVSADVRCRICSDSRRDASKICVVEEAKDVQAVERTREYRGLYHVLGGALNPIKAIGPDK 120
Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ R+ ++ E+I A EG+ TA +++ LK + +TR A G+PM
Sbjct: 121 LRIRELLVRLGAAVDGVEVDEVIIATDPNTEGEATAAFLVRMLKDFPGLTVTRPAAGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G+EL++ D+ T+ A+ R L
Sbjct: 181 GAELEFADELTLGRAMSGRRSL 202
>gi|269120331|ref|YP_003308508.1| recombination protein RecR [Sebaldella termitidis ATCC 33386]
gi|268614209|gb|ACZ08577.1| recombination protein RecR [Sebaldella termitidis ATCC 33386]
Length = 194
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 120/194 (61%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++N+I A++PG G +SA R H+++ +++ L + K+ C ICGN+
Sbjct: 2 KSLDNIIDEFAKLPGIGRKSAMRIAFHVLEMEDEELLNFITILKEAKEKIKKCEICGNLT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D++RD+S+I +V+D D+ A E+SK N LYHVLGG + PL+ IG +D+ I
Sbjct: 62 ENDICEICSDEERDSSIICIVKDSRDIIAFEKSKTYNGLYHVLGGIIDPLNGIGVDDLDI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L +R+ ++E+I A+ ++EG+TT+ Y+ +K ++ ++R+A GIPMG +++ D
Sbjct: 122 DKLTKRL-TGNVKEVILALDPSLEGETTSLYLSKIIKEKEIIVSRIASGIPMGGNIEFSD 180
Query: 188 DGTIFEAIRSRTVL 201
T+ ++ R +
Sbjct: 181 IATLSRSLEGRKEI 194
>gi|291278576|ref|YP_003495411.1| DNA recombination protein RecR [Deferribacter desulfuricans SSM1]
gi|290753278|dbj|BAI79655.1| DNA recombination protein RecR [Deferribacter desulfuricans SSM1]
Length = 199
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 113/193 (58%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ E + L+++PG G ++A R LHL+K + + L ++ + + C CG++
Sbjct: 6 DFERCVFELSKLPGIGKKTATRLALHLLKMTNKDVESLVNSINKLKTNIKFCKECGSLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C +C+D+ RD I VVE+ D+ +E S LYHVLGG ++PLD I P+ + +
Sbjct: 66 KDICYVCLDEGRDRKTICVVEEAKDVIIIENSGIYKGLYHVLGGRIAPLDGITPDMLSFE 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R+ + E+I A + ++G+TTA+Y+ L D++ITR+A G+ +G+ ++Y D+
Sbjct: 126 KLLNRVGDLGVTEVIIATNPDVDGETTAYYLKKLLADYDIRITRIASGLAVGTHIEYSDE 185
Query: 189 GTIFEAIRSRTVL 201
I +A+ +R L
Sbjct: 186 FAILKALENRVEL 198
>gi|83645395|ref|YP_433830.1| recombination protein RecR [Hahella chejuensis KCTC 2396]
gi|123533423|sp|Q2SIW9|RECR_HAHCH RecName: Full=Recombination protein recR
gi|83633438|gb|ABC29405.1| recombination protein RecR [Hahella chejuensis KCTC 2396]
Length = 201
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +T I+ L++ L +PG G ++A R L+L+++ + LA A+++ +V C
Sbjct: 1 MSSSLT-PAIDQLVRCLRYLPGVGAKTATRMALNLLERDQGRAADLAIAISDALTRVKRC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N + C+IC +RD V+ VVE D+ A+E++ + Y VL G LSP+D I
Sbjct: 60 SRCQNFCEAELCSICESPKRDDRVLCVVESPTDVLAIEQTSDYSGRYFVLMGHLSPIDGI 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPEDIG+ L + ++ + ELI A + T+EG+ TAH+I K +++ ++R+A+GIP+G
Sbjct: 120 GPEDIGVDKLKQLLQESAVSELILATNPTVEGEATAHFIAHIAKDLNIPVSRIAHGIPLG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL +D GT+ A++ R
Sbjct: 180 GELGMIDSGTLSHALQGRKPF 200
>gi|163795451|ref|ZP_02189418.1| recombination protein RecR [alpha proteobacterium BAL199]
gi|159179437|gb|EDP63968.1| recombination protein RecR [alpha proteobacterium BAL199]
Length = 197
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 103/197 (52%), Positives = 142/197 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ E++ ++ LA++PG GPRSARRA LHL+K+++ L+ PLAEA+A V C+ CG
Sbjct: 1 MAVGELDRAMQFLAKLPGLGPRSARRAILHLMKRRDSLMLPLAEALAAAARSVRPCTTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC IC D +RD I VVEDVAD+WALER+ A YHV+GG LS LD IGP D
Sbjct: 61 NLDTVDPCGICSDPRRDPQAICVVEDVADVWALERAVAFKGRYHVIGGVLSALDGIGPGD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + L+ R + E+I A++AT++GQTTAHY+ D+L VK++RLA+G+P+G ELD
Sbjct: 121 LNVDGLVLRAADPAVNEVILAMNATVDGQTTAHYLADRLASTGVKVSRLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLDDGT+ +A+R+R L
Sbjct: 181 YLDDGTLAQALRARQAL 197
>gi|91216056|ref|ZP_01253025.1| recombination protein RecR [Psychroflexus torquis ATCC 700755]
gi|91186033|gb|EAS72407.1| recombination protein RecR [Psychroflexus torquis ATCC 700755]
Length = 207
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 76/200 (38%), Positives = 125/200 (62%), Gaps = 2/200 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +E I+ +A +PG G R+A R LHL+K+ + LA+A+ ++ KV C C
Sbjct: 2 DFSSKFLETAIEEIALLPGIGKRTALRLALHLLKQPQSQTTDLAKALVDLKTKVKQCKSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC +Q RD S+I +VED+ D+ A+E ++ +YHVLGG +SP+D +GP
Sbjct: 62 HNISDKELCGICANQSRDHSIICIVEDIRDVMAIENTEQYKGIYHVLGGKISPMDGVGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGS 181
+ I+SL+++I+ K+ E+IFA+S+T+EG TT YI +++ +K + +A GI +G
Sbjct: 122 QLNIESLVDKIKTGKVIEVIFALSSTMEGDTTNFYIYKQIQASKHSLKTSTIARGISIGD 181
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I R
Sbjct: 182 ELEYADEITLGRSILQRVPF 201
>gi|146276571|ref|YP_001166730.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17025]
gi|166221959|sp|A4WPW1|RECR_RHOS5 RecName: Full=Recombination protein recR
gi|145554812|gb|ABP69425.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17025]
Length = 199
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 136/196 (69%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+IE LI+++AR+PG GPRSARRA L ++KK+ ++ PLA+AMA + C+ CGN
Sbjct: 4 APGDIERLIELMARLPGLGPRSARRAVLVMLKKRGAVMAPLAQAMAEVAATARDCARCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + D C IC D +R + VVEDVADLWALER+ YHVLGG LS LD +GP+++
Sbjct: 64 ITSADLCDICRDDRRATGELCVVEDVADLWALERAGVFRGRYHVLGGVLSALDSVGPDEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L ER+ + I E+I A++AT++GQTTAHYI D L+ V++T LA G+P+G ELDY
Sbjct: 124 RIPRLAERVRDEGISEVILALNATVDGQTTAHYIADVLEPSGVQVTSLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 184 LDDGTIGAALRARRRF 199
>gi|88802321|ref|ZP_01117848.1| recombination protein recR [Polaribacter irgensii 23-P]
gi|88781179|gb|EAR12357.1| recombination protein recR [Polaribacter irgensii 23-P]
Length = 205
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 126/198 (63%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++R+PG G R+A R LHL+K+ + L+EA+ ++ N V C C
Sbjct: 2 DFSSKLLENAVNEVSRLPGIGKRTALRLVLHLLKQPVEHTKYLSEALLHLRNDVKTCEKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T C IC + +R+ +++ VVED+ D+ A+E + LYHVLGG +SP++ IGP+
Sbjct: 62 HNISDTVLCDICQNPRRNPALVCVVEDIRDVMAIESTSQFKGLYHVLGGKISPIEGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I SL+ +I +I+ELIFA+S+T+EG TT YI +++ ++ + +A GI +G EL
Sbjct: 122 NLKIDSLVHKIGEGEIKELIFALSSTMEGDTTNFYIFKQIEKFNIITSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSIVNRIPF 199
>gi|160945465|ref|ZP_02092691.1| hypothetical protein FAEPRAM212_02990 [Faecalibacterium prausnitzii
M21/2]
gi|158443196|gb|EDP20201.1| hypothetical protein FAEPRAM212_02990 [Faecalibacterium prausnitzii
M21/2]
Length = 199
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 114/198 (57%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
T +E LI+ + G G + A R ++ ++ LA+A+ + ++ C IC
Sbjct: 2 DYTAAPLEKLIEEFGKFQGVGRKGATRMAYQVLSMSDKDAAALADAIRGAHTRLHRCRIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N D C +C +RD SVI VVE D+ A ER++ N LYHVL G L PL +G E
Sbjct: 62 QNFTDADLCPVCASAKRDTSVICVVEKPRDVQAFERTREYNGLYHVLHGLLDPLAGVGVE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L+ R++ ++E+I A++ T+EG+ TA Y+ +K + +++TRLA G+P+G+ L
Sbjct: 122 QLTVKELLARLKDDTVKEVIMAMNPTVEGEATAMYLAKLIKPLGIRVTRLASGLPVGASL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T++ A+ R L
Sbjct: 182 EYADETTLYRALSGRGEL 199
>gi|68537105|ref|YP_251810.1| recombination protein RecR [Corynebacterium jeikeium K411]
gi|260579450|ref|ZP_05847331.1| recombination protein RecR [Corynebacterium jeikeium ATCC 43734]
gi|123650055|sp|Q4JSL5|RECR_CORJK RecName: Full=Recombination protein recR
gi|68264704|emb|CAI38192.1| recombination protein [Corynebacterium jeikeium K411]
gi|258602420|gb|EEW15716.1| recombination protein RecR [Corynebacterium jeikeium ATCC 43734]
Length = 250
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 53/250 (21%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++++I +R+PG GP+SA+R LHL+ ++ + + A+ + V C IC
Sbjct: 1 MFEGPLQDVIDEFSRLPGIGPKSAQRIALHLLNEEPEDIERFQSALGRLQRGVTFCRICH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D RD S+I VVE+ D+ +ER+ YHVLGG+L PL+ IGP++
Sbjct: 61 NISQEDVCRICADSNRDKSIICVVEESKDIQVIERTAEYRGRYHVLGGALDPLNGIGPKE 120
Query: 125 IGIQSLIERI-------------------------------------------------- 134
+ + L++RI
Sbjct: 121 LNVTPLVQRIGGALPDVALGAKGGGASLGDADTPADGESSGADAAETGNAKTAAVETDVE 180
Query: 135 --EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTI 191
E +I E+I A EG+ TA Y+ L+ + +TRLA GIPMG +L+++D+ T+
Sbjct: 181 YDEAPEITEVIIATDPNTEGEATASYLGRLLRDFPGLTVTRLASGIPMGGDLEFVDELTL 240
Query: 192 FEAIRSRTVL 201
A RT L
Sbjct: 241 SRAFAGRTAL 250
>gi|291295538|ref|YP_003506936.1| recombination protein RecR [Meiothermus ruber DSM 1279]
gi|290470497|gb|ADD27916.1| recombination protein RecR [Meiothermus ruber DSM 1279]
Length = 195
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 121/194 (62%), Gaps = 4/194 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L++ LA +PG GP+SA++ L+LV+ + L+ + C +CGN
Sbjct: 3 YPERLLKLVRALAGLPGVGPKSAQKLGLYLVQNPDASAELLSS--LQAAQALHPCPVCGN 60
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D +RD +VI VVE ++DL A+ERS + LYHVLGG+L+PL+ IGPE +
Sbjct: 61 LAEDELCPICADPERDRTVICVVETISDLMAIERSGEYSGLYHVLGGALNPLEGIGPEQL 120
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L R+ + + E+I A T+EG+ TA Y+ ++L +++ TRLAYG+P+G L+Y
Sbjct: 121 YLEKLFARL--EGVNEVILATGMTVEGEATAGYLAERLSQHNIRPTRLAYGLPVGGSLEY 178
Query: 186 LDDGTIFEAIRSRT 199
D+ T+ A+ +R
Sbjct: 179 ADEVTLARALENRR 192
>gi|320354018|ref|YP_004195357.1| recombination protein RecR [Desulfobulbus propionicus DSM 2032]
gi|320122520|gb|ADW18066.1| recombination protein RecR [Desulfobulbus propionicus DSM 2032]
Length = 203
Score = 267 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 119/197 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I +E LI L R+PG G ++A R L+++++ LA + +++ + LC C
Sbjct: 2 QIIPPALERLIADLTRLPGIGRKTATRLALYILRRPAAEGRNLAHDLMVLHDTIHLCHQC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
TDPCAIC + RD+ ++ VVE+ D A+E++ YH+L G ++P+D IGP+
Sbjct: 62 FTFSETDPCAICGNPGRDSRLVCVVEEPGDQIAIEKTGVFRGTYHILHGVIAPMDGIGPD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I+ L +R+ ++ E++ A S+T+ G+ TA Y+ + L+ V+++RLA GIPMG ++
Sbjct: 122 ELKIRELRQRVASGQVDEVLIATSSTVPGEATASYLAEMLQDTKVRLSRLACGIPMGMDI 181
Query: 184 DYLDDGTIFEAIRSRTV 200
Y D+ T+ A+ SR
Sbjct: 182 KYADEHTLARAVESRQS 198
>gi|307611626|emb|CBX01311.1| recombination and repair protein recR [Legionella pneumophila 130b]
Length = 197
Score = 267 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 117/193 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ L++ L +PG GP+SA+R HL++ + Q LA + + C C N
Sbjct: 3 ALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTE 62
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C +C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+
Sbjct: 63 QTLCTLCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLP 122
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL++LD
Sbjct: 123 KLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDEAVNISQLAHGIPSGGELEFLDG 182
Query: 189 GTIFEAIRSRTVL 201
TI A+++R V+
Sbjct: 183 NTISSALKNRAVI 195
>gi|24217032|ref|NP_714513.1| recombinational DNA repair protein [Leptospira interrogans serovar
Lai str. 56601]
gi|45659291|ref|YP_003377.1| recombination protein RecR [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|56749625|sp|Q72LS5|RECR_LEPIC RecName: Full=Recombination protein recR
gi|56749658|sp|Q8EY84|RECR_LEPIN RecName: Full=Recombination protein recR
gi|24198441|gb|AAN51531.1| recombinational DNA repair protein [Leptospira interrogans serovar
Lai str. 56601]
gi|45602537|gb|AAS72014.1| RecR [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 201
Score = 267 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 123/201 (61%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + ++ +I+ L+ +PG G +SA R + HL++ ++ L + + NK+ C
Sbjct: 1 MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CG+ T+ C IC+ ++RD+ VVE D++ +E ++ YHVL G +SPL+ I
Sbjct: 61 KRCGSYAETEICEICVSEKRDSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I+ L+ERIE ++++E++ A + T+EG TA Y+ ++LK I V +TR+AYGI +G
Sbjct: 121 GPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
++ D T+ AIRSR L
Sbjct: 181 GSIELADQYTLGRAIRSRLQL 201
>gi|261855384|ref|YP_003262667.1| recombination protein RecR [Halothiobacillus neapolitanus c2]
gi|261835853|gb|ACX95620.1| recombination protein RecR [Halothiobacillus neapolitanus c2]
Length = 197
Score = 267 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 112/196 (57%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + L++ L +P G ++A+R L L++ + LA A+ + C C
Sbjct: 1 MFSPKFVALVQALRGLPSVGQKTAQRMALQLLEHDREGAAQLARAIVAALEGIGRCESCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
T C +C D RDA+ + +VE D A+E+S A LY +L G LSPLD IGPED
Sbjct: 61 IFSETPVCPVCADNHRDATQLCIVESPTDWLAIEQSGAYQGLYFILSGHLSPLDGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
IGI L+ R+ + E+I A SATIEG+ TA YIMD++ K+TRLA G+PMG EL+
Sbjct: 121 IGIPELMNRLANSPVEEIIMATSATIEGEATAGYIMDRVDPARYKVTRLAQGVPMGGELE 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD T+ A++SR
Sbjct: 181 YLDAQTLSLALKSRRS 196
>gi|260889568|ref|ZP_05900831.1| recombination protein RecR [Leptotrichia hofstadii F0254]
gi|260860979|gb|EEX75479.1| recombination protein RecR [Leptotrichia hofstadii F0254]
Length = 198
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K++++LI + A++PG G +SA R ++ + E + + E + + + + C ICGN+
Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLDRSEADIDRMLEIIKDSHANIKHCEICGNLS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC +++RD VI VVE V D+ A E+S+ N LYHVLGG + PL+ + ED+ +
Sbjct: 62 ENDICEICANEKRDKEVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNL 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ R+ + ++E+I A++ +EG+TT+ Y+ LK +VKI+++A GIPMG ++Y D
Sbjct: 122 RKLMNRL-NEDVKEVILALNPDLEGETTSLYLTKFLKEKNVKISKIASGIPMGGNIEYTD 180
Query: 188 DGTIFEAIRSR 198
T+ ++ R
Sbjct: 181 MATLGRSLEGR 191
>gi|72382490|ref|YP_291845.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. NATL2A]
gi|72002340|gb|AAZ58142.1| DNA replication and repair protein RecR [Prochlorococcus marinus
str. NATL2A]
Length = 182
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E + +EA+ N ++V C C ++ + C IC+++Q
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEYKIRLFSEALLNAKSQVGQCKTCFHLTAGEQCEICLNKQ 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R+ +I VV + DL ALER++ LYHV+GG +SP+D IGPE + I SLI+R++ I
Sbjct: 61 RNQELICVVSESRDLLALERTREYKGLYHVIGGLISPMDGIGPEMLEISSLIKRVDKANI 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
+E+I A++ +IEG TT+ Y+ LK K+TR+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 KEVILALTPSIEGDTTSLYVGRLLKPF-TKVTRIAYGLPVGSELEYADEVTLSRALEGRR 179
Query: 200 VL 201
L
Sbjct: 180 DL 181
>gi|319787608|ref|YP_004147083.1| recombination protein RecR [Pseudoxanthomonas suwonensis 11-1]
gi|317466120|gb|ADV27852.1| recombination protein RecR [Pseudoxanthomonas suwonensis 11-1]
Length = 195
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 112/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E LI+ +PG G +SA+R H++++ + LA +A ++ C+ C +
Sbjct: 3 LEELIEAFRVLPGVGRKSAQRMAYHVLERGREGGKRLATVLAEAVERIGHCAQCRDFSED 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ CA+C RD + VVE AD A+E + +Y VL G LSPLD +GP ++G+++
Sbjct: 63 EVCAVCASGSRDRQQLCVVETPADRLAIETATGYRGVYFVLQGRLSPLDGVGPRELGLET 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L R+ ++ E+I A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D G
Sbjct: 123 LGTRLAAGEVSEMIIATSATVEGEATAHYLAQLARQHGVRPSRLAQGLPLGGELEYVDRG 182
Query: 190 TIFEAIRSRTVL 201
T+ A +R +
Sbjct: 183 TLSHAFGTRAEM 194
>gi|54295586|ref|YP_128001.1| recombination and repair protein recR [Legionella pneumophila str.
Lens]
gi|54298740|ref|YP_125109.1| recombination protein RecR [Legionella pneumophila str. Paris]
gi|148361069|ref|YP_001252276.1| recombinational DNA repair protein RecR [Legionella pneumophila
str. Corby]
gi|296108400|ref|YP_003620101.1| recombination protein RecR [Legionella pneumophila 2300/99 Alcoy]
gi|73621494|sp|Q5X1D9|RECR_LEGPA RecName: Full=Recombination protein recR
gi|73621496|sp|Q5WT52|RECR_LEGPL RecName: Full=Recombination protein recR
gi|172047876|sp|A5IHT0|RECR_LEGPC RecName: Full=Recombination protein recR
gi|53752525|emb|CAH13957.1| Recombination and repair protein recR [Legionella pneumophila str.
Paris]
gi|53755418|emb|CAH16914.1| Recombination and repair protein recR [Legionella pneumophila str.
Lens]
gi|148282842|gb|ABQ56930.1| recombinational DNA repair protein RecR [Legionella pneumophila
str. Corby]
gi|295650302|gb|ADG26149.1| recombination protein RecR [Legionella pneumophila 2300/99 Alcoy]
Length = 197
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 117/193 (60%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ L++ L +PG GP+SA+R HL++ + Q LA + + C C N
Sbjct: 3 ALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTE 62
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C +C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+
Sbjct: 63 QTLCTLCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLP 122
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL++LD
Sbjct: 123 KLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELEFLDG 182
Query: 189 GTIFEAIRSRTVL 201
TI A+++R V+
Sbjct: 183 NTISSALKNRAVI 195
>gi|325479550|gb|EGC82646.1| recombination protein RecR [Anaerococcus prevotii ACS-065-V-Col13]
Length = 201
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + NLI+ ++P G +SA R + +V + + ++++ + +++ C ICG
Sbjct: 3 LFPESLTNLIEQFQKLPTIGRKSAERLAMSIVDDDRKKVEDFSKSLLEVKDRIHKCEICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D IGP++
Sbjct: 63 NLTEEDICDICKDITRNEEYLCIVEDVRNLIAIEKSNAYRGRYHVLGGLISPSDGIGPDE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ERI+ + I+E+I AIS+TIEG+TT ++ L +DVKIT+LA GIP+GS L+
Sbjct: 123 LNIDKLLERIKKEDIKEVIIAISSTIEGETTILFLSSILSKLDVKITKLAQGIPVGSNLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R +
Sbjct: 183 YFDQLTLERALEDRREI 199
>gi|329890899|ref|ZP_08269242.1| recombination protein RecR [Brevundimonas diminuta ATCC 11568]
gi|328846200|gb|EGF95764.1| recombination protein RecR [Brevundimonas diminuta ATCC 11568]
Length = 200
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 142/195 (72%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+K++EQLL PLA ++A +KV CS+CG+
Sbjct: 5 AGPEIERLISLLAKLPGMGPRSARRAALALLKRREQLLVPLAASLAETADKVVNCSVCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DT DPC++C DQ RD ++I VVE+ LWA+ERS A YHVLGG LS LD +GPE +
Sbjct: 65 PDTRDPCSVCADQSRDNALICVVEEAGALWAMERSGAFRGKYHVLGGLLSALDGVGPEQL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI R + + +E++ A+ AT++GQTTAHY+ ++L V++T LA G+P+G ELD+
Sbjct: 125 RIAELIGRAKGGEAKEVVLALPATVDGQTTAHYLAERLSAAGVQVTSLARGVPVGGELDW 184
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI +A+R+R
Sbjct: 185 LDDGTIIQALRARRP 199
>gi|282897322|ref|ZP_06305324.1| RecR protein [Raphidiopsis brookii D9]
gi|281197974|gb|EFA72868.1| RecR protein [Raphidiopsis brookii D9]
Length = 179
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 115/178 (64%), Gaps = 1/178 (0%)
Query: 24 GPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDAS 83
GP+SA+R L+++K+ E + LA+ + + +V LC +C ++ C IC + RD+
Sbjct: 2 GPKSAQRLALYILKRPESEIEALAQTLIDAKKQVGLCQVCYHLTAEPVCEICRNPHRDSQ 61
Query: 84 VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELI 143
I VV D D+ ALE+++ YHVLGG +SP+D +GPE + +Q+L+ R+ +K +E+I
Sbjct: 62 TICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGMGPEQLTLQALVRRVSQQKPQEVI 121
Query: 144 FAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
AIS ++EG+TT YI LK ++TR+A+G+PMG +L+Y D+ T+ +A+ R L
Sbjct: 122 MAISPSVEGETTTLYIAGLLKPF-TRVTRIAFGLPMGGDLEYADEITLAKALEGRREL 178
>gi|158520557|ref|YP_001528427.1| recombination protein RecR [Desulfococcus oleovorans Hxd3]
gi|226738998|sp|A8ZU38|RECR_DESOH RecName: Full=Recombination protein recR
gi|158509383|gb|ABW66350.1| recombination protein RecR [Desulfococcus oleovorans Hxd3]
Length = 199
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 119/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I N I L+R+PG G ++A R +HL+ ++ + LA ++ ++ +CS+C
Sbjct: 4 YPPSIRNAISHLSRLPGIGQKTAERLAMHLLHVPDRAVHELARSLVDLKKNTRMCSVCFT 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T CAIC D R+AS++ VVE ++ A+E++ A +YHVL G LSP+D IGP+DI
Sbjct: 64 LSDTPVCAICGDPDRNASLLCVVEGPTEVMAIEKTAAFKGVYHVLHGVLSPMDGIGPDDI 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L++R++ ++E++ A +EG+ TA Y+++ LK V +TR+A G+P G E+ Y
Sbjct: 124 RIRELVDRVKKGIVKEIVLATDTRVEGEATAAYLVEVLKPFPVTVTRIASGMPAGGEVRY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D T+ A+ R L
Sbjct: 184 SDPVTLKNAMEKRYAL 199
>gi|156339807|ref|XP_001620267.1| hypothetical protein NEMVEDRAFT_v1g223282 [Nematostella vectensis]
gi|156204949|gb|EDO28167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++R+PG G R+A R LHL+K+ + G LAEA+ + C C
Sbjct: 2 DFSSKLLENAVNEVSRLPGIGKRTALRLVLHLLKQPAEHTGYLAEAITQFRTTIKSCEKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T C IC + R++ ++ VVED+ D+ A+E + LYHVLGG +SP++ IGP
Sbjct: 62 HNISDTVLCEICNNPNRNSEIVCVVEDIRDVMAIESTAQFRGLYHVLGGKISPIEGIGPH 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I+SL+E++ +++ELIFA+S+T+EG TT YI +++ ++ + +A GI +G EL
Sbjct: 122 NLQIESLVEKVANGEVKELIFALSSTMEGDTTNFYIFKQIEKYNIITSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSIVNRIPF 199
>gi|308270886|emb|CBX27496.1| Recombination protein recR [uncultured Desulfobacterium sp.]
Length = 198
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 123/190 (64%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
NLIK L ++PG G ++A R +H+++ ++ LA + ++ +KV +CS C + T+
Sbjct: 9 NLIKNLTKLPGVGEKTAERYAMHILRSSQKEAEQLAADILDMKHKVRICSKCFALSETEV 68
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC + R+ S++ V E AD+ A+E+S + N LYH+L G LSP++ IGP+DI I+ LI
Sbjct: 69 CHICSNPSRNNSLLCVTEQPADMVAIEKSGSFNGLYHILSGVLSPINGIGPDDIKIKELI 128
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+RIE KI E++ A S ++EG+ TA YI L V ITR+A G+P+G +L Y+D T+
Sbjct: 129 KRIEEGKITEVVVATSTSMEGEATASYIAQCLSKYTVNITRIASGVPIGGDLKYVDQVTL 188
Query: 192 FEAIRSRTVL 201
+A+ +R +
Sbjct: 189 KKAMETRHAI 198
>gi|319950863|ref|ZP_08024746.1| recombination protein RecR [Dietzia cinnamea P4]
gi|319435476|gb|EFV90713.1| recombination protein RecR [Dietzia cinnamea P4]
Length = 268
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ ++NLI ++PG GP+SA+R HL++ + + + L A+ + V C +CG
Sbjct: 1 MYEGPVQNLIDEFGKLPGIGPKSAQRLAFHLLQAEPESVERLRSALQAVVEGVTYCEVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V C IC D +RD ++I VVE+ D+ A+ER++ LYHVLGG+L P++ IGP +
Sbjct: 61 TVAAAGRCRICSDPRRDPTLICVVEEPKDIEAIERTREFRGLYHVLGGALDPINGIGPNE 120
Query: 125 IGIQSLIERIE----VKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I L+ R+ ++I E+I A G+ T+ Y+ L+ D+ ++RLA G+PM
Sbjct: 121 LRIAGLMRRVGAEVEGEEIAEIIIATDPNTTGEATSTYLARLLRPFPDLIVSRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G++L++ D+ T+ A+ R +L
Sbjct: 181 GADLEFADELTLGSALSGRRIL 202
>gi|304384141|ref|ZP_07366594.1| recombination protein R [Prevotella marshii DSM 16973]
gi|304334768|gb|EFM01045.1| recombination protein R [Prevotella marshii DSM 16973]
Length = 204
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 126/201 (62%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M++ K +E + A++PG G ++A R LHL+++ + ++A+A + +V C
Sbjct: 2 MEQAYPSKLLEKAVSEFAKLPGIGRKTALRLVLHLLRRDVDEVETFSQAVARLRTEVKHC 61
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N+ D C IC+D +R+ S + VVE++ D+ A+E ++ N LYHVLGG +SP+D +
Sbjct: 62 RVCHNISDEDVCPICMDNRRERSTLCVVENIQDVMAIENTQQFNGLYHVLGGVISPMDGV 121
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ER+ E+I A+S+T+EG TT Y+ KL VK++ +A GI +G
Sbjct: 122 GPGDLEIDSLVERVAGGGFSEIILALSSTMEGDTTNFYLSRKLSPYGVKLSVIARGISVG 181
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT L
Sbjct: 182 DELEYTDEVTLGRSITNRTAL 202
>gi|87200908|ref|YP_498165.1| recombination protein RecR [Novosphingobium aromaticivorans DSM
12444]
gi|123488327|sp|Q2G492|RECR_NOVAD RecName: Full=Recombination protein recR
gi|87136589|gb|ABD27331.1| recombination protein RecR [Novosphingobium aromaticivorans DSM
12444]
Length = 198
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 142/196 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L L+K++E L L A+ + + C +CG
Sbjct: 1 MASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT++PC IC D +RD I VVE+VADLWAL+R++ YHVLGG LS L+ + PED
Sbjct: 61 NVDTSNPCGICTDHRRDQRSICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL++R+ I E++ A++AT+EGQTTAHYI ++L+G V++T+LA+G+P+G ELD
Sbjct: 121 LTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEGAAVRVTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|295105374|emb|CBL02918.1| recombination protein RecR [Faecalibacterium prausnitzii SL3/3]
Length = 199
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 114/198 (57%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
T +E LI+ + G G + A R ++ ++ LA+A+ + ++ C IC
Sbjct: 2 DYTAAPLEKLIEEFGKFQGVGRKGATRMAYQVLSMSDKDAAALADAIRGAHTRLHRCRIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N + C +C +RD SVI VVE D+ A ER++ N LYHVL G L PL +G E
Sbjct: 62 QNFTDAELCPVCASAKRDTSVICVVEKPRDVQAFERTREYNGLYHVLHGLLDPLAGVGAE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L+ R++ ++E+I A++ T+EG+ TA Y+ +K + +++TRLA G+P+G+ L
Sbjct: 122 QLTVKELLARLKDDTVKEVIMAMNPTVEGEATAMYLAKLIKPLGIRVTRLASGLPVGASL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T++ A+ R L
Sbjct: 182 EYADETTLYRALSGRGEL 199
>gi|221233209|ref|YP_002515645.1| recombination protein RecR [Caulobacter crescentus NA1000]
gi|21263936|sp|Q9ABF8|RECR_CAUCR RecName: Full=Recombination protein recR
gi|254790757|sp|B8GYE0|RECR_CAUCN RecName: Full=Recombination protein recR
gi|220962381|gb|ACL93737.1| Recombination protein recR [Caulobacter crescentus NA1000]
Length = 200
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 101/195 (51%), Positives = 135/195 (69%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +L+++PG GPRS RRA L L+KK++ LL PLA AMA KV C CG+
Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLATAMAEAQAKVRTCGTCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+D TDPCA+C D RD ++ VVE+V +WA+ER + YHVLGG LS LD IGPE +
Sbjct: 65 LDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHVLGGLLSALDGIGPEAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ + E+I A+ AT++GQTTAHYI D+L +V +T LA G+P+G +LD+
Sbjct: 125 RIGELVGRVADGSVAEVILALPATVDGQTTAHYIADRLAKTNVPVTMLARGVPVGGDLDW 184
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI +A+R+R
Sbjct: 185 LDDGTIAQALRARRP 199
>gi|86133950|ref|ZP_01052532.1| recombination protein RecR [Polaribacter sp. MED152]
gi|85820813|gb|EAQ41960.1| recombination protein RecR [Polaribacter sp. MED152]
Length = 205
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 127/198 (64%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ K +EN + ++R+PG G R+A R LHL+K+ ++ L+EA+ ++ N V C C
Sbjct: 2 DFSSKILENAVNEVSRLPGIGKRTALRLVLHLLKQPKENTSYLSEALLHLRNDVKSCEKC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ T C IC + +R+ ++ VVED+ D+ A+E + LYHVLGG +SP++ IGP+
Sbjct: 62 HNISDTVLCDICNNPKRNEEIVCVVEDIRDVMAIESTSQFKGLYHVLGGKISPIEGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
++ I+SL+ ++E I+ELIFA+S+T+EG TT YI +++ ++ + +A GI +G EL
Sbjct: 122 NLQIESLVNKVEKGIIKELIFALSSTMEGDTTNFYIYKQIEKYNITTSTIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ +I +R
Sbjct: 182 EYADEVTLGRSIVNRIPF 199
>gi|94264276|ref|ZP_01288070.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|94270246|ref|ZP_01291688.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|93450881|gb|EAT01896.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
gi|93455321|gb|EAT05528.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1]
Length = 203
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ +E LI ++PG G +SA R LHL+++ LA ++ ++ + +CS C
Sbjct: 2 NVIPPALERLIVDFGKLPGIGRKSATRLALHLLRRPALEAHGLARSLHELHQLITMCSSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
DPC IC + RDAS++ VVE+ DL A+E++ + YH+L G+LSP+D IGP+
Sbjct: 62 CAFSEEDPCEICRNPGRDASLVCVVEEPGDLLAIEKTSSYKGKYHILHGALSPMDGIGPK 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGS 181
++ I L+ERI+ +++RE++ A S+T+ G+ TA Y++D+L+ V++TRLAYGIPMG
Sbjct: 122 ELKIGLLLERIKREQVREVLIATSSTVPGEATASYLIDQLRQHTTGVRLTRLAYGIPMGM 181
Query: 182 ELDYLDDGTIFEAIRSRTV 200
++ Y D+ T+ AI +R
Sbjct: 182 DIKYADELTLARAIETRQE 200
>gi|254496162|ref|ZP_05109059.1| recombinational DNA repair protein RecR [Legionella drancourtii
LLAP12]
gi|254354618|gb|EET13256.1| recombinational DNA repair protein RecR [Legionella drancourtii
LLAP12]
Length = 197
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 121/192 (63%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + Q LA + +++ C C N
Sbjct: 4 LNRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMSQINHCQRCMNYTEQ 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C + QRD+S++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+
Sbjct: 64 SFCALCQNPQRDSSLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPK 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I ++I+E+I A+S ++EGQTT H+I L+ + IT+LA+GIP G EL++LD
Sbjct: 124 LKNLILEEEIQEVILALSPSVEGQTTIHFIQQLLRDQSINITQLAHGIPSGGELEFLDGN 183
Query: 190 TIFEAIRSRTVL 201
TI A+R+R ++
Sbjct: 184 TIGNALRNRALI 195
>gi|33592643|ref|NP_880287.1| recombination protein RecR [Bordetella pertussis Tohama I]
gi|73621471|sp|Q7VY12|RECR_BORPE RecName: Full=Recombination protein recR
gi|33572289|emb|CAE41841.1| recombination protein RecR [Bordetella pertussis Tohama I]
gi|332382060|gb|AEE66907.1| recombination protein RecR [Bordetella pertussis CS]
Length = 202
Score = 266 bits (682), Expect = 9e-70, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M ++ + + LI+ L R+PG G RSARR HL++ Q L A++ +
Sbjct: 1 MDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSAAVQHLRH 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + + CA C + +RD ++ +VE AD +E S LY+VL G ++PL+
Sbjct: 61 CARCNSFTEDEVCATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GP ++ Q +IER ++E+I A + T EG+TTAH++ D L +K+TRLA G+P
Sbjct: 121 VGPRELDFQRVIERACDGVVQEVILATNFTAEGETTAHFLDDALSERGLKVTRLARGVPA 180
Query: 180 GSELDYLDDGTIFEAIRSRTV 200
GSEL+Y+D GTI A+ R
Sbjct: 181 GSELEYVDAGTIAWALMERRS 201
>gi|121604577|ref|YP_981906.1| recombination protein RecR [Polaromonas naphthalenivorans CJ2]
gi|171769290|sp|A1VMV7|RECR_POLNA RecName: Full=Recombination protein recR
gi|120593546|gb|ABM36985.1| DNA replication and repair protein RecR [Polaromonas
naphthalenivorans CJ2]
Length = 208
Score = 266 bits (682), Expect = 9e-70, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 12/205 (5%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ L + L ++PG G +SA R HL++ + +A A+ + + C++C +
Sbjct: 4 SNALDGLTQALRKLPGVGAKSAARMAFHLLQHDKPGALQIARALEHAVQSIRHCALCNTL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C + QRD S + VVE AD ALER+ A LY VL G LSPLD +GP DIG
Sbjct: 64 TEQEVCVTCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGVGPNDIG 123
Query: 127 IQSLIER------------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174
+Q L +R ++++E+I A + T EG+ TAH I LK +++TRLA
Sbjct: 124 LQKLFDRAVPKDEHGQPLPAASREVQEVILATNFTAEGEATAHVIAQALKSRGMQVTRLA 183
Query: 175 YGIPMGSELDYLDDGTIFEAIRSRT 199
G+P+GSEL+Y+D GTI A+ R
Sbjct: 184 RGVPVGSELEYVDLGTIAHALTDRR 208
>gi|88808903|ref|ZP_01124412.1| recombination protein RecR [Synechococcus sp. WH 7805]
gi|88786845|gb|EAR18003.1| recombination protein RecR [Synechococcus sp. WH 7805]
Length = 182
Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 70/181 (38%), Positives = 110/181 (60%), Gaps = 1/181 (0%)
Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
+PG GPR+A+R LHL+++ E+ + A A+ +V C C ++ C IC + +
Sbjct: 1 MPGIGPRTAQRLALHLLRQPEEQIHSFANALLAARTEVGQCQTCHHLSAEPICEICRNPE 60
Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139
R I VV D DL ALER++ + YHVLGG +SP+D IGP+ + I SL++R+
Sbjct: 61 RSNGQICVVADSRDLLALERTREFSGHYHVLGGLISPMDGIGPDLLQISSLVKRVAASNT 120
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
E+I A++ ++EG TT+ Y+ LK ++R+AYG+P+GSEL+Y D+ T+ A+ R
Sbjct: 121 EEVILALTPSVEGDTTSLYVARLLKPF-TTVSRIAYGLPVGSELEYADEVTLSRALEGRR 179
Query: 200 V 200
Sbjct: 180 A 180
>gi|227499704|ref|ZP_03929804.1| recombination protein RecR [Anaerococcus tetradius ATCC 35098]
gi|227218171|gb|EEI83434.1| recombination protein RecR [Anaerococcus tetradius ATCC 35098]
Length = 201
Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 122/197 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + NLI ++P G +SA R + +V + + + A+++ + +++ C ICG
Sbjct: 3 LYPESLVNLIDEFQKLPTIGRKSAERLAMSIVDRDKDSVDEFAKSLLEVKSRIHSCEICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ D C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D IGP+
Sbjct: 63 NLTEEDICDICKDITRNEECLCIVEDVKNLIAIEKSHAYRGRYHVLGGLISPSDDIGPDK 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + L+ERI+ + I+E+I AIS+TIEG+TT+ ++ L +VKIT+LA GIP+GS L+
Sbjct: 123 LNVDKLLERIDKEDIKEVILAISSTIEGETTSLFLTGLLSNKNVKITKLAQGIPVGSNLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R +
Sbjct: 183 YFDQLTLERALEDRREI 199
>gi|77464285|ref|YP_353789.1| recombination protein RecR [Rhodobacter sphaeroides 2.4.1]
gi|126463127|ref|YP_001044241.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17029]
gi|221640169|ref|YP_002526431.1| recombination protein RecR [Rhodobacter sphaeroides KD131]
gi|332559174|ref|ZP_08413496.1| recombination protein RecR [Rhodobacter sphaeroides WS8N]
gi|123591212|sp|Q3IZZ6|RECR_RHOS4 RecName: Full=Recombination protein recR
gi|166221958|sp|A3PMA3|RECR_RHOS1 RecName: Full=Recombination protein recR
gi|254790780|sp|B9KLQ5|RECR_RHOSK RecName: Full=Recombination protein recR
gi|77388703|gb|ABA79888.1| recombination protein RecR [Rhodobacter sphaeroides 2.4.1]
gi|126104791|gb|ABN77469.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17029]
gi|221160950|gb|ACM01930.1| Recombination protein recR [Rhodobacter sphaeroides KD131]
gi|332276886|gb|EGJ22201.1| recombination protein RecR [Rhodobacter sphaeroides WS8N]
Length = 199
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 136/196 (69%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+IE LI+++AR+PG GPRSARRA L ++KK+ ++ PLA+AMA + C CGN
Sbjct: 4 APGDIERLIELMARLPGLGPRSARRAVLLMLKKRGAVMAPLAQAMAEVATSARDCVRCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC D++R + VVEDVADLWALER+ A YHVLGG LS LD +GPE++
Sbjct: 64 ITNADLCGICRDERRATGELCVVEDVADLWALERAGAFRGRYHVLGGVLSALDSVGPEEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L ER+ + I E+I A++AT++GQTTAHYI D L+ V++T LA G+P+G ELDY
Sbjct: 124 RIPRLAERVREEGISEVILALNATVDGQTTAHYIADVLEPSGVQVTSLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 184 LDDGTIGAALRARRRF 199
>gi|293607022|ref|ZP_06689366.1| recombination protein R [Achromobacter piechaudii ATCC 43553]
gi|292814619|gb|EFF73756.1| recombination protein R [Achromobacter piechaudii ATCC 43553]
Length = 202
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 114/194 (58%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + +LI+ L R+PG G RSARR HL++ Q L A+A + C+ C +
Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLKHCARCNSF 67
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C + +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++
Sbjct: 68 SEEEVCGTCSNPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELD 127
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ +I+R +++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+
Sbjct: 128 FERIIKRATDGEVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYV 187
Query: 187 DDGTIFEAIRSRTV 200
D GTI A+ R
Sbjct: 188 DAGTIAWALMERKT 201
>gi|33600426|ref|NP_887986.1| recombination protein RecR [Bordetella bronchiseptica RB50]
gi|73621469|sp|Q7WMF1|RECR_BORBR RecName: Full=Recombination protein recR
gi|73621470|sp|Q7WAY7|RECR_BORPA RecName: Full=Recombination protein recR
gi|33568025|emb|CAE31938.1| recombination protein RecR [Bordetella bronchiseptica RB50]
Length = 202
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M ++ + + LI+ L R+PG G RSARR HL++ Q L A++ +
Sbjct: 1 MDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSGAVQHLRH 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + + CA C + +RD ++ +VE AD +E S LY+VL G ++PL+
Sbjct: 61 CARCNSFTEDEVCATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GP ++ Q +IER ++E+I A + T EG+TTAH++ D L +K+TRLA G+P
Sbjct: 121 VGPRELDFQRVIERACDGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPA 180
Query: 180 GSELDYLDDGTIFEAIRSRTV 200
GSEL+Y+D GTI A+ R
Sbjct: 181 GSELEYVDAGTIAWALMERRS 201
>gi|226939893|ref|YP_002794966.1| recombination protein RecR [Laribacter hongkongensis HLHK9]
gi|254790772|sp|C1D5E0|RECR_LARHH RecName: Full=Recombination protein recR
gi|226714819|gb|ACO73957.1| RecR [Laribacter hongkongensis HLHK9]
Length = 203
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 110/196 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+LI L +PG GP++A+R HL+++ LA A+ + + + C+ C
Sbjct: 3 TPASLESLITALRVLPGVGPKTAQRMAYHLMQRDPGGADRLARAIDHARSHLKHCARCNT 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
T+ C +C D QR V+ VVE AD +E++ + + LY VL G +SPLD + DI
Sbjct: 63 FSETELCVLCADDQRRQDVLCVVEMPADALMIEQTHSYDGLYFVLMGKVSPLDGLTARDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L R + E+I A + T EG+ TAH + K + ++R+A G+P+G EL++
Sbjct: 123 PLEQLARRALDGTVNEVILATNFTAEGEATAHVLATLFKDRGLSVSRIARGLPVGGELEH 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ +A+ R L
Sbjct: 183 VDAGTLAQALYERRRL 198
>gi|317406000|gb|EFV86278.1| recombination protein recR [Achromobacter xylosoxidans C54]
Length = 202
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 112/194 (57%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + +LI+ L R+PG G RSARR HL++ Q L A+A + CS C +
Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLRHCSRCNSF 67
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D CA C + +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++
Sbjct: 68 AEEDVCATCANPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELD 127
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+I R ++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+
Sbjct: 128 FDRVIRRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYV 187
Query: 187 DDGTIFEAIRSRTV 200
D GTI A+ R
Sbjct: 188 DAGTIAWALMERKT 201
>gi|289450283|ref|YP_003475321.1| recombination protein RecR [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184830|gb|ADC91255.1| recombination protein RecR [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 200
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 78/202 (38%), Positives = 123/202 (60%), Gaps = 3/202 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + NLI L ++P G R+A++ +++ E LA+A+ ++ LC
Sbjct: 1 MSQ--FPPVLANLISKLGQLPTIGNRTAQKLAFYIMSMPEAEALALADAVRKARTEIHLC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C N+ ++ C+IC D+ RD S+I VVE AD+ ALE+ + YHVL G++SPL I
Sbjct: 59 SVCCNLTDSEVCSICADKTRDNSIICVVESPADVSALEKLHVFHGRYHVLHGAVSPLKNI 118
Query: 121 GPEDIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
GP+DI ++ L R+ + +I+E+ A S+T EG+ TA YI LK +K TRLA+G+PM
Sbjct: 119 GPDDIKLKELFSRLAAEPEIKEVFLANSSTPEGEATALYISRLLKPAGIKTTRLAHGLPM 178
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
GS L++ D+ T+ +AI R +
Sbjct: 179 GSSLEFADEITLSKAIEGRREI 200
>gi|118586635|ref|ZP_01544075.1| recombination protein [Oenococcus oeni ATCC BAA-1163]
gi|118432950|gb|EAV39676.1| recombination protein [Oenococcus oeni ATCC BAA-1163]
Length = 201
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 70/199 (35%), Positives = 114/199 (57%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ +++PG G +SA R + + + + A +++ + + C ICG
Sbjct: 3 YPEAISKLIESYSKLPGIGRKSATRLAFYTLGMSDDDVKNFARSLSASKSDLTFCRICGF 62
Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ DPC IC D+ RD S I VVE+ D A+E + + LYHVL G LSP++ GPE
Sbjct: 63 ITSKDDDPCVICSDESRDQSKIFVVENSQDEMAIENTHDYHGLYHVLNGVLSPMEGRGPE 122
Query: 124 DIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI I SLI R+ +++E+I + A+ EG+ T Y+ ++ +K+TRLA G+ +G+
Sbjct: 123 DINITSLITRLSDHSEVKEVIIGLDASTEGEATTLYLARLIRPSGIKVTRLARGLSVGTN 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D T+ +A+ RT +
Sbjct: 183 VDYADQLTLTQAVNGRTEI 201
>gi|257066285|ref|YP_003152541.1| recombination protein RecR [Anaerococcus prevotii DSM 20548]
gi|256798165|gb|ACV28820.1| recombination protein RecR [Anaerococcus prevotii DSM 20548]
Length = 201
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + ++NLI+ ++P G +SA R + +V+ + + ++++ + +++ C ICG
Sbjct: 3 LYPESLQNLIEQFQKLPTIGRKSAERLAMAIVESDYKSVDDFSKSLTEVKDRIHACKICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D +GP+
Sbjct: 63 NLTEDEVCDICKDITRNEEYLCIVEDVRNLIAIEKSHAYRGKYHVLGGLISPSDGLGPDQ 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ERIE + I E+I AIS+TIEG+TT ++ + L ++KIT+LA GIP+GS L+
Sbjct: 123 LNIDKLLERIEKENIEEVILAISSTIEGETTVLFLTNLLSERNIKITKLAQGIPVGSNLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R +
Sbjct: 183 YFDQLTLERALEDRREI 199
>gi|33595895|ref|NP_883538.1| recombination protein RecR [Bordetella parapertussis 12822]
gi|33565974|emb|CAE36525.1| recombination protein RecR [Bordetella parapertussis]
Length = 216
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M ++ + + LI+ L R+PG G RSARR HL++ Q L A++ +
Sbjct: 15 MDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSGAVQHLRH 74
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + + CA C + +RD ++ +VE AD +E S LY+VL G ++PL+
Sbjct: 75 CARCNSFTEDEVCATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEG 134
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GP ++ Q +IER ++E+I A + T EG+TTAH++ D L +K+TRLA G+P
Sbjct: 135 VGPRELDFQRVIERACDGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPA 194
Query: 180 GSELDYLDDGTIFEAIRSRTV 200
GSEL+Y+D GTI A+ R
Sbjct: 195 GSELEYVDAGTIAWALMERRS 215
>gi|294678280|ref|YP_003578895.1| recombination protein RecR [Rhodobacter capsulatus SB 1003]
gi|294477100|gb|ADE86488.1| recombination protein RecR [Rhodobacter capsulatus SB 1003]
Length = 199
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 133/193 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EIE LI +AR+PG GPRSARRA LHL++K+E + PLA A++ + C ICGN+
Sbjct: 7 EIEALIAQMARLPGLGPRSARRAVLHLLRKREGQMAPLAAALSRVAETARDCPICGNIAM 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC R I VVEDVADLWALER A YHVLGG+LS LD IGPE++ I
Sbjct: 67 GASCEICDSPARAIGEICVVEDVADLWALERGGAFKGRYHVLGGTLSALDAIGPEELRIP 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
LI RI + + E+I A++AT+EGQTTAHYI + L+G V++T LA G+P+G ELDYLDD
Sbjct: 127 QLIARIRAEAVTEVILALNATVEGQTTAHYIAEALEGTGVRVTSLAQGVPIGGELDYLDD 186
Query: 189 GTIFEAIRSRTVL 201
GTI A+R+R L
Sbjct: 187 GTISAALRARRAL 199
>gi|116491392|ref|YP_810936.1| recombinational DNA repair protein (RecF pathway) [Oenococcus oeni
PSU-1]
gi|290890958|ref|ZP_06554022.1| hypothetical protein AWRIB429_1412 [Oenococcus oeni AWRIB429]
gi|122276426|sp|Q04E51|RECR_OENOB RecName: Full=Recombination protein recR
gi|116092117|gb|ABJ57271.1| Recombinational DNA repair protein (RecF pathway) [Oenococcus oeni
PSU-1]
gi|290479357|gb|EFD88017.1| hypothetical protein AWRIB429_1412 [Oenococcus oeni AWRIB429]
Length = 201
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 70/199 (35%), Positives = 114/199 (57%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI+ +++PG G +SA R + + + + A +++ + + C ICG
Sbjct: 3 YPEAIAKLIESYSKLPGIGRKSATRLAFYTLGMSDDDVKNFARSLSASKSDLTFCRICGF 62
Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ DPC IC D+ RD S I VVE+ D A+E + + LYHVL G LSP++ GPE
Sbjct: 63 ITSKDDDPCVICSDESRDQSKIFVVENSQDEMAIENTHDYHGLYHVLNGVLSPMEGRGPE 122
Query: 124 DIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
DI I SLI R+ +++E+I + A+ EG+ T Y+ ++ +K+TRLA G+ +G+
Sbjct: 123 DINITSLITRLSDHSEVKEVIIGLDASTEGEATTLYLARLIRPSGIKVTRLARGLSVGTN 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+DY D T+ +A+ RT +
Sbjct: 183 VDYADQLTLTQAVNGRTEI 201
>gi|126731111|ref|ZP_01746919.1| recombination protein RecR [Sagittula stellata E-37]
gi|126708413|gb|EBA07471.1| recombination protein RecR [Sagittula stellata E-37]
Length = 197
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 100/193 (51%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I+ LI ++AR+PG GPRSARRA LHL++K+ LL PL+EAM + C CGNV T
Sbjct: 6 PIDTLIGLMARLPGLGPRSARRAVLHLIRKRGPLLQPLSEAMTEVARTARECLNCGNVST 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+D C IC D+ R ++ VVEDVADLWA+ER++ YHVLGG+LS LD +GP+++ I
Sbjct: 66 SDICPICTDEGRGNGLLCVVEDVADLWAMERAQVFRGRYHVLGGTLSALDGVGPDELRIP 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V ++ LA G+P+G ELDYLDD
Sbjct: 126 RLMDRLGAENVTEVILALNATIDGQTTAHYIADQLEGR-VSVSSLAQGVPIGGELDYLDD 184
Query: 189 GTIFEAIRSRTVL 201
GTI A+ +R
Sbjct: 185 GTITAALNARKRF 197
>gi|110932060|gb|ABH02983.1| RecR [Spirochaeta aurantia]
Length = 182
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 106/178 (59%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
PG G +SA R HL+K L L ++ + + V CSICGN DPC IC D R
Sbjct: 1 PGLGKKSAVRMAFHLLKADRDYLNQLGRQISTLRDSVVRCSICGNYTEADPCEICSDPTR 60
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIR 140
D +V+ VVE V DL L+ + L+HVL G ++PLD IGP ++G+ L R+ +R
Sbjct: 61 DQTVLCVVEQVQDLMNLQATGEFRGLFHVLHGVIAPLDGIGPAELGLDRLDRRLAEGTVR 120
Query: 141 ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
E+I A + T+EG TTA YI L +KITRLA G+P+G +L+Y D TI A+++R
Sbjct: 121 EVILATNPTLEGDTTALYIHRMLGPRQLKITRLASGLPVGGDLEYADRLTIARALKAR 178
>gi|212550851|ref|YP_002309168.1| recombination protein RecR [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549089|dbj|BAG83757.1| recombination protein RecR [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 209
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+K +EN I A++PG G ++A R H +K+ + + A+ + N++ C +
Sbjct: 2 EKYPSFLLENAINEFAKLPGIGRKTALRLVFHSLKRTTKEVENFGRAIIALRNEINYCKV 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ + C IC + RD S+I VVE++ ++ A+E +K + LYHVLGG +SP++ IGP
Sbjct: 62 CYNICDNEICDICSNTSRDISLICVVENIKEVMAIENTKQFHGLYHVLGGVISPMEGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGS 181
D+ I+SLIER++ K+RE+I A+S T+EG TT YI K+ I+ VKI+ LA G+ +G
Sbjct: 122 GDLQIKSLIERVKNGKVREIILALSTTMEGDTTNFYIYRKISNINSVKISTLARGVSIGD 181
Query: 182 ELDYLDDGTIFEAIRSR 198
E++Y D+ T+ ++I +R
Sbjct: 182 EIEYTDEITLGKSILNR 198
>gi|62263541|gb|AAX78170.1| unknown protein [synthetic construct]
Length = 235
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 27 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 86
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 87 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 146
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 147 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 205
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 206 GELEYLDQQTLLHAFNARTNI 226
>gi|187477419|ref|YP_785443.1| recombination protein RecR [Bordetella avium 197N]
gi|123513969|sp|Q2KVU4|RECR_BORA1 RecName: Full=Recombination protein recR
gi|115422005|emb|CAJ48527.1| recombination protein [Bordetella avium 197N]
Length = 202
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + + + LI+ L R+PG G RSARR HL++ Q L A+A +
Sbjct: 1 MDNALPEPEPLIALIEALRRLPGVGARSARRMAYHLLQHDVQGADMLGRALAGAVQNLRR 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + D C IC + +RDAS++ +VE AD +E S LY+VL G L+PL+
Sbjct: 61 CARCNSFTEDDVCVICANPKRDASLLCIVETPADQNVIESSHGYRGLYYVLMGRLAPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+GP ++ Q +++R ++E+I A + T EG+TTAH++ + L +K+TRLA G+P
Sbjct: 121 VGPRELDFQRVLDRAADGLVQEVILATNFTAEGETTAHFLGEALAERGLKVTRLARGVPA 180
Query: 180 GSELDYLDDGTIFEAIRSRTV 200
GSEL+Y+D GTI A+ R
Sbjct: 181 GSELEYVDAGTIAWALMERRA 201
>gi|149179095|ref|ZP_01857667.1| recombinant protein RecR [Planctomyces maris DSM 8797]
gi|148842086|gb|EDL56477.1| recombinant protein RecR [Planctomyces maris DSM 8797]
Length = 192
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 111/190 (58%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71
LI A +PG G +SA R +++ E LA+A+ + V CS+C N+ +
Sbjct: 3 QLIDQFATLPGIGRKSAERLAHYILSIPEPEARQLADAINAVKQSVRPCSVCYNLTEQEV 62
Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131
C IC D +RD ++ VVE D+ +LE + + +YHVL G +SPL+ IGPE++ I +LI
Sbjct: 63 CTICSDSRRDKKLVCVVESPRDVVSLEATSSFQGVYHVLQGRISPLEGIGPENLTINALI 122
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
R++ + E+I A + T+EG TA YI + L+ +V+ITRLA GI GS L++ + +
Sbjct: 123 RRVKQDGVTEMIMATNPTLEGDGTALYISNLLEHENVEITRLARGIASGSVLEFANKEML 182
Query: 192 FEAIRSRTVL 201
+A++ R
Sbjct: 183 SDALQGRQRF 192
>gi|148655671|ref|YP_001275876.1| recombination protein RecR [Roseiflexus sp. RS-1]
gi|172048083|sp|A5UTH3|RECR_ROSS1 RecName: Full=Recombination protein recR
gi|148567781|gb|ABQ89926.1| recombination protein RecR [Roseiflexus sp. RS-1]
Length = 205
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 116/198 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+I + LI+ L R+PG GP++A R T L++ + L LA A+ + +V LCS C
Sbjct: 8 QILPAPVIRLIEELNRLPGVGPKTASRLTFFLLRAPDDLPLALAHALTALKQQVQLCSRC 67
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ D CAIC + RD VI VVE+ D+ A+ER+ LYHVL G ++PL+ + E
Sbjct: 68 YFITQGDLCAICANPARDQRVICVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNRE 127
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
DI L++R+ + + E+I A + +EG+ TA ++ L + V++TRLA G+P G +L
Sbjct: 128 DIYFDELLDRVRAEPVEEVIIATNPNLEGEATAFHLQRALAPLGVRVTRLARGLPTGGDL 187
Query: 184 DYLDDGTIFEAIRSRTVL 201
++ D GT+ A+ R +
Sbjct: 188 EWADPGTLGSALEGRREM 205
>gi|167957505|ref|ZP_02544579.1| recombination protein RecR [candidate division TM7 single-cell
isolate TM7c]
Length = 205
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++ + + LI L +PG G R+A R HL++ K + L+ ++AN+ V C
Sbjct: 1 MAKQLLPRALTTLIDELGNLPGVGVRTAERYAYHLLRTKAESNKRLSNSIANLKANVKYC 60
Query: 61 SICGNV--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
+ + + D R+ VI VVE+ D+ ALER+ N YHVLGG +SP+D
Sbjct: 61 PATFALIDSDEEISPLYADPTRNKKVIAVVEEPLDIIALERTGQYNGTYHVLGGVISPID 120
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYG 176
IGPE + I+ L+ RI+ ++ E+I A +A++EG++TA ++ +K I+VK++RLA G
Sbjct: 121 NIGPEQLHIKELVIRIKQDEVEEIIIATNASVEGESTALFLQRYIKENEINVKMSRLARG 180
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+P+G +L+Y D T+ A+ R L
Sbjct: 181 LPVGVDLEYADQITLSHALEGRRSL 205
>gi|225848980|ref|YP_002729144.1| recombination protein RecR [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644146|gb|ACN99196.1| recombination protein RecR [Sulfurihydrogenibium azorense Az-Fu1]
Length = 199
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 123/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++ +I+ ++ +PG+G +SA+R ++L+K L + +A + +K+ C C
Sbjct: 2 NYIPDILKKVIEDISNLPGYGEKSAQRLAINLLKLPRGEAVDLIKHIAQMLDKIHPCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + C IC ++RD + I VVE+ D +A+E++ +YHVLGG LSPL+ IGPE
Sbjct: 62 GIYTDQEICPICSSEERDKTHICVVEESFDAYAIEKTGKFKGVYHVLGGRLSPLEGIGPE 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I++LIERI+ +++E+I A + T+EG+ T +YI + LK + ITRLAYG+P GS L
Sbjct: 122 KLNIKTLIERIKKYQVKEVIIATNPTVEGEATGNYIYNLLKKYPLNITRLAYGLPFGSVL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ DD T+ +A+ R +
Sbjct: 182 ENADDFTLSKALEYRVKI 199
>gi|254418095|ref|ZP_05031819.1| recombination protein RecR [Brevundimonas sp. BAL3]
gi|196184272|gb|EDX79248.1| recombination protein RecR [Brevundimonas sp. BAL3]
Length = 205
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 140/200 (70%), Gaps = 5/200 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +LA++PG GPRSARRA L L+K++EQLL PLA ++A KV CS+CG
Sbjct: 5 AGPEIERLISLLAKLPGLGPRSARRAALALLKRREQLLVPLAASLAETAEKVVSCSVCGA 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
DT DPCAIC D RD +I VVE+ LWA+ERS A YHVLGG LS LD +GPE +
Sbjct: 65 PDTRDPCAICSDGSRDNGLICVVEEAGALWAMERSGAFRGKYHVLGGLLSALDGVGPEHL 124
Query: 126 GIQSLIERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I L+ R+ +RE++ A+ AT++GQTTAHY+ +++ G DV++T LA G+P+G
Sbjct: 125 RIAELVGRVRHQNEGGGAVREVVLALPATVDGQTTAHYVAERISGPDVQVTSLARGVPVG 184
Query: 181 SELDYLDDGTIFEAIRSRTV 200
ELD+LDDGTI +A+R+R
Sbjct: 185 GELDWLDDGTIVQAMRARRP 204
>gi|149185874|ref|ZP_01864189.1| recombinational DNA repair protein [Erythrobacter sp. SD-21]
gi|148830435|gb|EDL48871.1| recombinational DNA repair protein [Erythrobacter sp. SD-21]
Length = 198
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 107/197 (54%), Positives = 143/197 (72%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA L LVK++E L L EA+A + + C CG
Sbjct: 1 MASQEIETLASALARLPGLGPRSARRAVLWLVKRRESALPALLEALATVGEALVECETCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDTT+PC IC D +RD + VVEDVADLWAL+R+K YHVLGG LS LD I PED
Sbjct: 61 NVDTTNPCGICADPRRDGKGLCVVEDVADLWALDRAKLFTGKYHVLGGKLSALDGIRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL+ R+E + E++ A++AT+EGQTTAHY+ ++L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LNIASLLSRVEEGGVDEVVLAMNATLEGQTTAHYLAERLEDFPVRITQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 181 YLDEGTLAQALRARRPL 197
>gi|326560440|gb|EGE10822.1| recombination protein RecR [Moraxella catarrhalis 7169]
gi|326561644|gb|EGE11981.1| recombination protein RecR [Moraxella catarrhalis 103P14B1]
gi|326562607|gb|EGE12918.1| recombination protein RecR [Moraxella catarrhalis 46P47B1]
gi|326563583|gb|EGE13837.1| recombination protein RecR [Moraxella catarrhalis 12P80B1]
gi|326565825|gb|EGE15987.1| recombination protein RecR [Moraxella catarrhalis BC1]
gi|326570480|gb|EGE20520.1| recombination protein RecR [Moraxella catarrhalis BC8]
gi|326571164|gb|EGE21188.1| recombination protein RecR [Moraxella catarrhalis BC7]
gi|326573454|gb|EGE23422.1| recombination protein RecR [Moraxella catarrhalis 101P30B1]
gi|326575648|gb|EGE25571.1| recombination protein RecR [Moraxella catarrhalis CO72]
gi|326577112|gb|EGE27006.1| recombination protein RecR [Moraxella catarrhalis O35E]
Length = 198
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++ LIK L +P G +SA+R L L+ KK LA A+ + + C C
Sbjct: 1 MLTPKLDKLIKELQVLPSVGQKSAQRMALQLLTKKRTQGLSLAAALETAMHDIKECLQCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC+D +RD ++ VVE+ +D+ A+E+S A Y VLGG LSP+D I D
Sbjct: 61 SFSDDEICPICLDHRRDDGLLCVVENASDVMAIEQSGAYRGKYFVLGGHLSPIDGINAND 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I LI RI + I E+I A AT+EGQTTA +I D + KITRLA GIPMG EL
Sbjct: 121 LHIDQLIHRIRHEAIHEVILATGATVEGQTTAFFIHDAICTHVPKITRLAQGIPMGGELG 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ +A+++R+ +
Sbjct: 181 YVDSITLHQALQNRSNI 197
>gi|258541158|ref|YP_003186591.1| recombination protein RecR [Acetobacter pasteurianus IFO 3283-01]
gi|256632236|dbj|BAH98211.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-01]
gi|256635293|dbj|BAI01262.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-03]
gi|256638348|dbj|BAI04310.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-07]
gi|256641402|dbj|BAI07357.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-22]
gi|256644457|dbj|BAI10405.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-26]
gi|256647512|dbj|BAI13453.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-32]
gi|256650565|dbj|BAI16499.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653556|dbj|BAI19483.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-12]
Length = 198
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 101/197 (51%), Positives = 134/197 (68%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G+EIE LI++L R+PGFGPRSARR L+L+K+ + L PLA AM N + CS CG
Sbjct: 1 MGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLAHAMERAGNAIKTCSSCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC IC D RD +I VVE V DLWALER+ +Y VLGG+LSPL IGPED
Sbjct: 61 NLDTIDPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ + L E++ +RE+I A+ AT+EG TT H++MD+L V ++R+A G+PMG L
Sbjct: 121 LDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLAPYGGVTVSRVAQGVPMGGAL 180
Query: 184 DYLDDGTIFEAIRSRTV 200
D LDDGT+ A+ +R
Sbjct: 181 DVLDDGTLAAALGARRP 197
>gi|154245783|ref|YP_001416741.1| recombination protein RecR [Xanthobacter autotrophicus Py2]
gi|229470346|sp|A7IGE1|RECR_XANP2 RecName: Full=Recombination protein recR
gi|154159868|gb|ABS67084.1| recombination protein RecR [Xanthobacter autotrophicus Py2]
Length = 201
Score = 264 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 111/201 (55%), Positives = 146/201 (72%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + G EIE LI+++AR+PG GPRSARR LHL+KK+E L+ PLA AM + K+ C
Sbjct: 1 MPRAVAGPEIERLIQLIARLPGLGPRSARRVALHLIKKREALMAPLAAAMTDALGKIVEC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNVD DPC IC D RD ++VV DV DLWALER+ +NA YHVLGG LSPLD +
Sbjct: 61 RRCGNVDVCDPCTICTDTSRDRRTLVVVADVGDLWALERAGVLNAPYHVLGGVLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ + L+ R+ ++ E+I A+ AT++GQTTAHYI D L+ V++TRLA G+P+G
Sbjct: 121 GPEDLNLAKLVTRVHEDEVGEVILALGATVDGQTTAHYITDLLREAHVRVTRLAQGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AIR+RT +
Sbjct: 181 GELDYLDEGTLSAAIRARTQM 201
>gi|42525063|ref|NP_970443.1| DNA repair and genetic recombination protein [Bdellovibrio
bacteriovorus HD100]
gi|73621467|sp|Q6MH30|RECR_BDEBA RecName: Full=Recombination protein recR
gi|39577274|emb|CAE81097.1| DNA repair and genetic recombination protein [Bdellovibrio
bacteriovorus HD100]
Length = 204
Score = 264 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+E L+ L+R+PG GP++A+R ++++ + L+EA+ + +V C C N
Sbjct: 6 ALEKLVHELSRLPGIGPKTAQRLAYYILRTGNEYPERLSEALLRVKAEVHDCPTCFNYTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
TD C C D R I VVE+ +D+ +E S A YHVL G++SPL+ IGP+++ I+
Sbjct: 66 TDICRYCEDSHRSDESICVVEEPSDIMRIESSGAFRGRYHVLHGAISPLEGIGPKELKIK 125
Query: 129 SLIERIEVK------KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
LI+R+E I+E+I A+ A +EG TT Y+ +L+G +K++R+A+G+P+GS+
Sbjct: 126 ELIDRVEDGLSGTGPAIKEIILALDADLEGDTTILYLAKQLQGKGLKLSRIAHGVPIGSD 185
Query: 183 LDYLDDGTIFEAIRSRTVL 201
+D++DD T+ A+++R L
Sbjct: 186 IDFVDDRTMGRALQNRVEL 204
>gi|325280372|ref|YP_004252914.1| Recombination protein recR [Odoribacter splanchnicus DSM 20712]
gi|324312181|gb|ADY32734.1| Recombination protein recR [Odoribacter splanchnicus DSM 20712]
Length = 203
Score = 264 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + ++ + A +PG G ++A + LHL+KK Q + +++ ++ + C C N
Sbjct: 3 SSRLLDKAVDQFASLPGVGRKTALKFVLHLLKKDVQEVDDFLKSIGDLKKNIKECRRCHN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D +RD + + VVE++ D+ ++E + N LYHVLGG +SP+D IGP D+
Sbjct: 63 ISDGEICEICSDPKRDNTTLCVVENIKDILSIEATSQYNGLYHVLGGIISPMDGIGPADL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184
I SL+ER+E + IRE+IFA+SATIEG TT +YI K+K D+ I+ +A GI +G++L+
Sbjct: 123 HITSLVERVEQEPIREIIFALSATIEGDTTGYYIFKKMKNKEDLVISTIAKGISIGNDLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D+ T+ +I +R
Sbjct: 183 YTDELTLGRSIVNRVKF 199
>gi|119386355|ref|YP_917410.1| recombination protein RecR [Paracoccus denitrificans PD1222]
gi|171704476|sp|A1B870|RECR_PARDP RecName: Full=Recombination protein recR
gi|119376950|gb|ABL71714.1| recombination protein RecR [Paracoccus denitrificans PD1222]
Length = 199
Score = 264 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 108/196 (55%), Positives = 132/196 (67%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +AR+PG GPRSARR LHL++++ + LA MAN+ C +CGN
Sbjct: 4 AGDEIETLIATMARLPGLGPRSARRIVLHLIRRRTGQMAQLAGLMANVAEHARECLVCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V +D C IC D R I VV DVADLWALER +A + YHVLGGSLS LD +GPED+
Sbjct: 64 VTGSDICPICEDPDRATGEICVVTDVADLWALERGRAFHGRYHVLGGSLSALDEVGPEDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI RI + I E+I A+SAT+EGQTTAHYI + L V +T LA G+P+G ELDY
Sbjct: 124 RIPQLIARIAEEGITEVILALSATVEGQTTAHYIAEALAPTGVAVTGLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 184 LDDGTITAALRARRKL 199
>gi|241668771|ref|ZP_04756349.1| recombination protein RecR [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877302|ref|ZP_05250012.1| recombination protein recR [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843323|gb|EET21737.1| recombination protein recR [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 201
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MNNQIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C ++ D C IC Q RD S + ++E + DL A+E + Y VL G +SPLD I
Sbjct: 61 KYCQSLTEKDVCDICSSQNRDESKLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I ++I E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPNELKLDILEQIIINREISEIILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLIHAFNARTNI 200
>gi|56707920|ref|YP_169816.1| recombination protein RecR [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670391|ref|YP_666948.1| recombination protein RecR [Francisella tularensis subsp.
tularensis FSC198]
gi|224457002|ref|ZP_03665475.1| recombination protein RecR [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370411|ref|ZP_04986416.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874729|ref|ZP_05247439.1| recombination protein recR [Francisella tularensis subsp.
tularensis MA00-2987]
gi|73621485|sp|Q5NGM6|RECR_FRATT RecName: Full=Recombination protein recR
gi|122970980|sp|Q14I28|RECR_FRAT1 RecName: Full=Recombination protein recR
gi|56604412|emb|CAG45442.1| Recombination protein recR [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320724|emb|CAL08825.1| Recombination protein recR [Francisella tularensis subsp.
tularensis FSC198]
gi|151568654|gb|EDN34308.1| hypothetical protein FTBG_00175 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840728|gb|EET19164.1| recombination protein recR [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159105|gb|ADA78496.1| Recombination protein recR [Francisella tularensis subsp.
tularensis NE061598]
Length = 200
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200
>gi|326383523|ref|ZP_08205209.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395]
gi|326197607|gb|EGD54795.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395]
Length = 203
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI LA++PG GP+ A+R HL+ + + L A+ ++ + V C+ CG
Sbjct: 1 MYEGPIQDLIDQLAKLPGLGPKGAQRIAFHLLAGENVEIDRLIAALGHVRDDVTFCTECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RDA+ I VVE+ D++A+ER+K + YHVLGG+L PL IGP+
Sbjct: 61 NVAADTLCRICGDARRDATKICVVEEPKDIYAIERTKEFDGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ ++ + + + E+I A EG+ TA Y++ LK + +TRLA G+PM
Sbjct: 121 LRIRELLRRLGDQPDGQDVSEIIVATDPNTEGEATATYLLRMLKDFPGLSVTRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R VL
Sbjct: 181 GGDLEFADELTLGRALSGRRVL 202
>gi|206603201|gb|EDZ39681.1| Recombination protein RecR [Leptospirillum sp. Group II '5-way CG']
Length = 214
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
K +LI+ L +PG G ++A R HL+K E+ L+ ++ + + LC
Sbjct: 11 NKSPYPLPFHHLIESLRTLPGIGIKTATRLAFHLLKAPEEEALQLSREISGLREALVLCP 70
Query: 62 ICGNVDTTDP----CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117
C N+ D C IC D RD ++VVED+ L+++ER+ YHVL G LSPL
Sbjct: 71 QCQNIMDRDSRLSCCTICADPARDPGTVMVVEDIQTLYSIERTGEFRGRYHVLLGRLSPL 130
Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
+ IGPE + ++ L++R +I E+I A S T+EG++TA Y+ K + VK++R+A+GI
Sbjct: 131 EGIGPEALRVRELLDRTGTGEIHEMILATSPTVEGESTALYLARLFKPLGVKVSRIAFGI 190
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G EL+++DD T+ ++ +R +
Sbjct: 191 PVGLELEFVDDITLIRSVEARRPM 214
>gi|319778423|ref|YP_004129336.1| Recombination protein RecR [Taylorella equigenitalis MCE9]
gi|317108447|gb|ADU91193.1| Recombination protein RecR [Taylorella equigenitalis MCE9]
Length = 198
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 115/200 (57%), Gaps = 2/200 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M ++ + ++ LI+ ++ +PG G R+ARR H+++ + LA + + + C
Sbjct: 1 MTQE--PEPLQALIESISGLPGIGVRTARRLAYHMLQNDREGAEYLAHNIKSALITLKHC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C N ++D C IC +RD + + +VE ADL +E S LY+VL G ++P+
Sbjct: 59 SKCNNFSSSDICDICSSNKRDLTTLCIVETPADLIRIEESHGYRGLYYVLMGRITPMSPK 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
G + + + LIER++ I+E+I A + T EG+TTAH+I +D++ +R+A G+P G
Sbjct: 119 GAQGLNFEHLIERVKESGIKEVIIATNFTTEGETTAHFIKTLFSDLDIQTSRIARGVPSG 178
Query: 181 SELDYLDDGTIFEAIRSRTV 200
SEL+Y+D TI A+ R
Sbjct: 179 SELEYVDAATIAWALNDRKK 198
>gi|283780298|ref|YP_003371053.1| recombination protein RecR [Pirellula staleyi DSM 6068]
gi|283438751|gb|ADB17193.1| recombination protein RecR [Pirellula staleyi DSM 6068]
Length = 199
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 110/194 (56%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ + +I+ +++PG G +SA R H+++ + LA+A+ + V CS C N+
Sbjct: 6 QSLATVIEEFSKLPGIGRKSAERLAYHILRVHKSEALALADAIRAVRESVQYCSTCYNLA 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D +RD +++ +VE DL ALE++ LYHVL G ++PLD +GP+ + I
Sbjct: 66 EGPTCTICSDDRRDKTLLCIVEQPRDLMALEQAGIFKGLYHVLLGRIAPLDGVGPDQLTI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ER+ RE+I A + T+EG TA YI + L V+ITRLA GI GS L+Y +
Sbjct: 126 DPLVERVRSGTFREIIMATNPTVEGDGTALYISNLLAEYPVQITRLARGITTGSILEYTN 185
Query: 188 DGTIFEAIRSRTVL 201
+ +A+ R
Sbjct: 186 KEILADALSLRQKF 199
>gi|296113064|ref|YP_003627002.1| recombination protein RecR [Moraxella catarrhalis RH4]
gi|295920758|gb|ADG61109.1| recombination protein RecR [Moraxella catarrhalis RH4]
Length = 198
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 117/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++ LIK L +P G +SA+R L L+ KK LA A+ + + C C
Sbjct: 1 MLTPKLDKLIKELQVLPSVGQKSAQRMALQLLTKKRTQGLSLAAALETAMHDIKECLQCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC+D +RD ++ VVE+ +D+ A+E+S A Y VLGG LSP+D I D
Sbjct: 61 SFSDDEICPICLDHRRDDGLLCVVENASDVIAIEQSGAYRGKYFVLGGHLSPIDGINAND 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I LI RI + I E+I A AT+EGQTTA +I D + KITRLA GIPMG EL
Sbjct: 121 LHIDQLIHRIRHEAIHEVILATGATVEGQTTAFFIHDAICTHVPKITRLAQGIPMGGELG 180
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ +A+++R+ +
Sbjct: 181 YVDSITLHQALQNRSNI 197
>gi|254437816|ref|ZP_05051310.1| recombination protein RecR [Octadecabacter antarcticus 307]
gi|198253262|gb|EDY77576.1| recombination protein RecR [Octadecabacter antarcticus 307]
Length = 197
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 107/201 (53%), Positives = 140/201 (69%), Gaps = 4/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + K+I+ LI ++AR+PG GPRSARRA LHL+KK+ QLL PLAEA+ + C
Sbjct: 1 MTQ--APKDIDALIDLMARLPGLGPRSARRAVLHLIKKRGQLLNPLAEALTIVGATAREC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+ T++ C IC ++R+ I VVEDVADLWA+ERS YHVLGG+LS LD I
Sbjct: 59 LNCGNIGTSEICGICKSEKRNVGQICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDDI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I L +RI + I E+I A+ ATI+GQTTAHYI D+L V++T LA G+P+G
Sbjct: 119 GPDELRIPKLRDRITTEHITEVILALGATIDGQTTAHYIADEL--HGVQVTTLAQGVPVG 176
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGTI A+ +R L
Sbjct: 177 GELDYLDDGTITAALNARKAL 197
>gi|256370923|ref|YP_003108747.1| recombination protein RecR [Acidimicrobium ferrooxidans DSM 10331]
gi|256007507|gb|ACU53074.1| recombination protein RecR [Acidimicrobium ferrooxidans DSM 10331]
Length = 205
Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ LI+ L R+PG GP+SA+R L L+ + LA+ + ++ C CG +
Sbjct: 5 PPTLDALIEELGRLPGIGPKSAQRIALALIVRGPAAAHRLADVLVTATERLGRCDRCGAL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C IC D RD +++VVE D+WA ER++ YHVLGG +SP+D +GP+D+
Sbjct: 65 AEGARCPICDDPARDPRIVLVVEGDRDVWAFERARRFRGTYHVLGGVISPMDGVGPDDLA 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I LI R+E + I E++ A S T+EG+TTA Y+ L G V ++RLA G+P+G EL+Y+
Sbjct: 125 IGRLIARVEAEPIEEVVVATSPTVEGETTATYLARVLAGR-VGVSRLATGVPVGGELEYV 183
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ R
Sbjct: 184 DELTLARALEGRRPF 198
>gi|270158085|ref|ZP_06186742.1| recombination protein RecR [Legionella longbeachae D-4968]
gi|289163649|ref|YP_003453787.1| Recombination and repair protein recR [Legionella longbeachae
NSW150]
gi|269990110|gb|EEZ96364.1| recombination protein RecR [Legionella longbeachae D-4968]
gi|288856822|emb|CBJ10633.1| Recombination and repair protein recR [Legionella longbeachae
NSW150]
Length = 197
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 117/189 (61%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ L++ L +PG GP+SA+R HL++ + Q LA + N++ C C N
Sbjct: 4 LTRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMNQIQHCERCANYTEH 63
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
CA+C + RD+S++ VVE AD+ A+E+S A Y VL G +SPLD +GP+DIG+
Sbjct: 64 KLCALCQNSDRDSSLLCVVESPADVSAIEQSNAFQGKYFVLMGKISPLDGLGPDDIGLPR 123
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I + I+E+I A+S ++EGQTT H+I L+ V +T+LA+GIP G EL++LD
Sbjct: 124 LKRLIIQENIKEVILALSPSVEGQTTIHFIHQLLRDQPVNMTQLAHGIPSGGELEFLDGN 183
Query: 190 TIFEAIRSR 198
TI A+R+R
Sbjct: 184 TIGNALRNR 192
>gi|262037122|ref|ZP_06010615.1| recombination protein RecR [Leptotrichia goodfellowii F0264]
gi|261748853|gb|EEY36199.1| recombination protein RecR [Leptotrichia goodfellowii F0264]
Length = 195
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K +++L+ + A++PG G +SA R +++K E+ + + + + Y+ + CS+CGN+
Sbjct: 2 KRLDDLVNVFAKLPGIGRKSAMRIAFDILEKDEKEIDDILYTIKDSYDNIKHCSVCGNLS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C ICID++R+ +VI VVE V D+ A E+S+ N LYHVLGG + PL+ + +D+ I
Sbjct: 62 EKDVCEICIDEKRNKNVICVVEGVRDIIAFEKSETYNGLYHVLGGKIDPLNGVTIDDLNI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L+ER+ + E+I A++ +EG+TT Y+ LKG ++KI+++A GIPMG ++Y D
Sbjct: 122 EKLMERL-DGTVSEIILALNPDLEGETTNLYLTKILKGKNIKISKIASGIPMGGNIEYTD 180
Query: 188 DGTIFEAIRSRTV 200
T+ +++ R
Sbjct: 181 MATLGKSLEGRVE 193
>gi|258621804|ref|ZP_05716835.1| recombination protein RecR [Vibrio mimicus VM573]
gi|258586035|gb|EEW10753.1| recombination protein RecR [Vibrio mimicus VM573]
Length = 197
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 67/177 (37%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G
Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGG 179
>gi|327405347|ref|YP_004346185.1| DNA replication and repair protein RecR [Fluviicola taffensis DSM
16823]
gi|327320855|gb|AEA45347.1| DNA replication and repair protein RecR [Fluviicola taffensis DSM
16823]
Length = 201
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 119/198 (60%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I K +E ++ + +PG G R+A R L+L+K+ + L + + + V CS C
Sbjct: 2 NIPSKYVEEAVEQFSSLPGIGKRTALRLVLNLLKRNPEELERFGDVLQQLKTHVQSCSSC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN+ T C+IC +++R+ +I VVED+ D+ A+E + +YHVLGG +SP+D IGP
Sbjct: 62 GNISDTAICSICANEKRNHRLICVVEDIRDVMAIESTGTYLGIYHVLGGIISPMDGIGPN 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ IQ L+++ + E+I A+S T+EG TT ++ K+ +V+IT L+ GI +GSE+
Sbjct: 122 DLFIQPLVDKCSQGSVDEIILALSPTMEGDTTNFFLYKKIHATNVQITTLSRGIAVGSEI 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
Y D+ T+ +I+ R
Sbjct: 182 QYADEITLSRSIQQRIPF 199
>gi|124516359|gb|EAY57867.1| Recombination protein RecR [Leptospirillum rubarum]
Length = 214
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 4/204 (1%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
K +LI+ L +PG G ++A R HL+K E L+ ++ + + LC
Sbjct: 11 NKSPYPLPFHHLIESLRTLPGIGIKTATRLAFHLLKAPEAEALQLSREISGLREALVLCP 70
Query: 62 ICGNVDTTDP----CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117
C N+ D C IC D RD ++VVED+ L+++ER+ YHVL G LSPL
Sbjct: 71 QCQNIMDRDSRLSCCTICSDPARDPGTVMVVEDIQTLYSIERTGEFRGRYHVLLGRLSPL 130
Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
+ IGPE + ++ L++R +I E+I A S T+EG++TA Y+ K + VK++R+A+GI
Sbjct: 131 EGIGPEALRVRELLDRTGTGEIHEMILATSPTVEGESTALYLARLFKPLGVKVSRIAFGI 190
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G EL+++DD T+ ++ +R +
Sbjct: 191 PVGLELEFVDDITLIRSVEARRPM 214
>gi|134301666|ref|YP_001121634.1| recombination protein RecR [Francisella tularensis subsp.
tularensis WY96-3418]
gi|254369564|ref|ZP_04985575.1| recombination protein recR [Francisella tularensis subsp.
holarctica FSC022]
gi|254374597|ref|ZP_04990078.1| hypothetical protein FTDG_00771 [Francisella novicida GA99-3548]
gi|166221941|sp|A4IX62|RECR_FRATW RecName: Full=Recombination protein recR
gi|134049443|gb|ABO46514.1| recombination protein RecR [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151572316|gb|EDN37970.1| hypothetical protein FTDG_00771 [Francisella novicida GA99-3548]
gi|157122518|gb|EDO66653.1| recombination protein recR [Francisella tularensis subsp.
holarctica FSC022]
Length = 200
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200
>gi|54113491|gb|AAV29379.1| NT02FT0742 [synthetic construct]
Length = 200
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ AI +RT +
Sbjct: 180 GELEYLDQQTLLHAINARTNI 200
>gi|315497914|ref|YP_004086718.1| recombination protein recr [Asticcacaulis excentricus CB 48]
gi|315415926|gb|ADU12567.1| recombination protein RecR [Asticcacaulis excentricus CB 48]
Length = 200
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 104/196 (53%), Positives = 138/196 (70%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE L+ +L+++PG GPRSARRA L L+KK+EQLL PL AM + +V C ICG
Sbjct: 5 AGPEIERLMALLSKLPGLGPRSARRAALALLKKREQLLIPLTAAMQDAAERVTSCHICGA 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T DPCA C D RDA++I VVE+ + LWA+ER A + YHVLGG LS LD + PED+
Sbjct: 65 LSTRDPCATCADPTRDAAMICVVEEDSALWAMERVGAFSGRYHVLGGLLSALDGVRPEDL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSEL 183
+ L++R+ + EL+ A+ AT+EGQTTAHYI D++K + +V IT LA G+P+G EL
Sbjct: 125 RLSGLMQRVSSGGVEELVMALPATVEGQTTAHYIADRVKPLAPEVTITHLARGVPVGGEL 184
Query: 184 DYLDDGTIFEAIRSRT 199
D+LDDGTI A +SR
Sbjct: 185 DWLDDGTIAHAFKSRR 200
>gi|260574233|ref|ZP_05842238.1| recombination protein RecR [Rhodobacter sp. SW2]
gi|259023699|gb|EEW26990.1| recombination protein RecR [Rhodobacter sp. SW2]
Length = 199
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 103/195 (52%), Positives = 135/195 (69%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+IE LI+++AR+PG GPRSARRA L L+KK+ L+ PLA+AMA + C+ CGN+
Sbjct: 5 PGDIEQLIELMARLPGLGPRSARRAVLVLLKKRGALMAPLAQAMAQVALSARDCTTCGNI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
D CAIC D +R + VVEDVADLWA+ER A YHVLGG+LSPLD +GP+ +
Sbjct: 65 GAGDTCAICADPRRATGELCVVEDVADLWAMERGGAFKGRYHVLGGTLSPLDAVGPDTLR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L+ R+ + I E+I A++AT++GQTTAHYI D L V IT LA G+P+G ELDYL
Sbjct: 125 IPRLLARVAEEGISEVILALNATVDGQTTAHYIADVLGASGVAITSLAQGVPIGGELDYL 184
Query: 187 DDGTIFEAIRSRTVL 201
DDGTI A+++R
Sbjct: 185 DDGTIGAALKARKRF 199
>gi|83313204|ref|YP_423468.1| recombinational DNA repair protein (RecF pathway) [Magnetospirillum
magneticum AMB-1]
gi|123540568|sp|Q2VZR6|RECR_MAGMM RecName: Full=Recombination protein recR
gi|82948045|dbj|BAE52909.1| Recombinational DNA repair protein (RecF pathway) [Magnetospirillum
magneticum AMB-1]
Length = 197
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 112/197 (56%), Positives = 147/197 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI++L+R+PG GPRSARRA L LV+K+E LL PLA+AMA+ +V CS+CG
Sbjct: 1 MVGPEIERLIQLLSRLPGLGPRSARRAALRLVEKRESLLVPLAQAMADAAARVRTCSVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N DT DPCAIC D +RD S++ VVEDVA LWA+ER+ + Y VLGG LS LD +GPED
Sbjct: 61 NFDTIDPCAICADHRRDPSMLCVVEDVAGLWAMERTGSFKGRYAVLGGLLSALDGVGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI+SL+ R I E+I A AT+EGQTTAHY+ ++L +V ++ LA+G+P+G ELD
Sbjct: 121 LGIESLVARALDPAITEIILATPATVEGQTTAHYVAERLAPCNVTVSGLAHGVPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTVL 201
+LDDGTI A+R+R V
Sbjct: 181 HLDDGTITAALRARRVF 197
>gi|311108169|ref|YP_003981022.1| recombination protein RecR [Achromobacter xylosoxidans A8]
gi|310762858|gb|ADP18307.1| recombination protein RecR [Achromobacter xylosoxidans A8]
Length = 202
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 114/194 (58%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + +LI+ L R+PG G RSARR HL++ Q L A+A + C+ C +
Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVQDLKHCARCNSF 67
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C++ +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++
Sbjct: 68 SEDEVCGTCVNPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELD 127
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ +I+R ++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+
Sbjct: 128 FERVIKRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYV 187
Query: 187 DDGTIFEAIRSRTV 200
D GTI A+ R
Sbjct: 188 DAGTIAWALMERKT 201
>gi|254452325|ref|ZP_05065762.1| recombination protein RecR [Octadecabacter antarcticus 238]
gi|198266731|gb|EDY91001.1| recombination protein RecR [Octadecabacter antarcticus 238]
Length = 197
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 140/201 (69%), Gaps = 4/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + K+I+ LI ++AR+PG GPRSARRA LHL+KK+ QLL PLAEA+ + C
Sbjct: 1 MSQ--APKDIDALINLMARLPGLGPRSARRAVLHLIKKRGQLLNPLAEALTIVGATAREC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGN+ T+D C IC ++R+ I VVEDVADLWA+ERS YHVLGG+LS LD I
Sbjct: 59 LNCGNIGTSDLCGICESEKRNVGQICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDDI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I L +RI + I E+I A+ ATI+GQTTAHYI D+L V++T LA G+P+G
Sbjct: 119 GPDELRIPKLRDRITTEHITEVILALGATIDGQTTAHYIADEL--HGVQVTTLAQGVPVG 176
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGTI A+ +R L
Sbjct: 177 GELDYLDDGTITAALNARKAL 197
>gi|34540960|ref|NP_905439.1| recombination protein RecR [Porphyromonas gingivalis W83]
gi|73621505|sp|Q7MV45|RECR_PORGI RecName: Full=Recombination protein recR
gi|34397275|gb|AAQ66338.1| recombination protein RecR [Porphyromonas gingivalis W83]
Length = 207
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 121/201 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K + + +E I A +PG G ++A R L+L+++ + A A+ ++ + C
Sbjct: 1 MIQKYSSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ +D C IC D RD S + VVE++ D+ A+E + LYHVLGG +SP+D I
Sbjct: 61 RHCHNISDSDVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++I E+I A+S T+EG TT ++ KL+ V+++ +A GI +G
Sbjct: 121 GPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLEPTGVRVSVIARGIAIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSILNRTDF 201
>gi|118497787|ref|YP_898837.1| RecFOR complex, RecR component [Francisella tularensis subsp.
novicida U112]
gi|194323759|ref|ZP_03057535.1| recombination protein RecR [Francisella tularensis subsp. novicida
FTE]
gi|208779850|ref|ZP_03247194.1| recombination protein RecR [Francisella novicida FTG]
gi|254373144|ref|ZP_04988633.1| recombination protein recR [Francisella tularensis subsp. novicida
GA99-3549]
gi|166221940|sp|A0Q768|RECR_FRATN RecName: Full=Recombination protein recR
gi|118423693|gb|ABK90083.1| RecFOR complex, RecR component [Francisella novicida U112]
gi|151570871|gb|EDN36525.1| recombination protein recR [Francisella novicida GA99-3549]
gi|194322123|gb|EDX19605.1| recombination protein RecR [Francisella tularensis subsp. novicida
FTE]
gi|208744305|gb|EDZ90605.1| recombination protein RecR [Francisella novicida FTG]
Length = 200
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETARAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD +
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQRIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200
>gi|332185194|ref|ZP_08386943.1| recombination protein RecR [Sphingomonas sp. S17]
gi|332014918|gb|EGI56974.1| recombination protein RecR [Sphingomonas sp. S17]
Length = 198
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/196 (53%), Positives = 146/196 (74%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EIE L + LARIPG GPRSARRA LHL+KK+E L PL A+A + ++ CS CG
Sbjct: 1 MASPEIEALTQALARIPGLGPRSARRAVLHLLKKREAALAPLLSALAAVEERLETCSTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT +PCAIC D +RD + + +VE+VADLWALERS+ +HVLGG LS LD + PED
Sbjct: 61 NIDTANPCAICADPRRDPAALCIVEEVADLWALERSRLFPGRFHVLGGRLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I +L+ RIE I E++ A++AT+EGQTTAHYI ++++ V++T+LA+G+P+G ELD
Sbjct: 121 LAIDALVRRIEKGAIDEIVLAMNATLEGQTTAHYIAERIERFPVRVTQLAHGLPVGGELD 180
Query: 185 YLDDGTIFEAIRSRTV 200
YLD+GT+ +A+R+R
Sbjct: 181 YLDEGTLAQALRARRP 196
>gi|32474297|ref|NP_867291.1| recombinant protein RecR [Rhodopirellula baltica SH 1]
gi|73621509|sp|Q7UQ68|RECR_RHOBA RecName: Full=Recombination protein recR
gi|32444835|emb|CAD74837.1| recombinant protein RecR [Rhodopirellula baltica SH 1]
gi|327539585|gb|EGF26194.1| recombination protein RecR [Rhodopirellula baltica WH47]
Length = 199
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 113/193 (58%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ +L+ L+++PG G +SA R HL++ E LA A+ + V CS+C N+
Sbjct: 7 AVSDLVDQLSKLPGIGRKSAERLAFHLLRVHEDEALALASAIRRVRTDVRYCSVCYNLSE 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
T+ C IC D +RDA+ + VVE DL +L+ S + LYHVL G ++PLD I P+ + I
Sbjct: 67 TELCRICSDPKRDATRLCVVEQPRDLLSLDASGVYSGLYHVLLGRIAPLDGITPDQLTID 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
SL+ER+ E+I A + T+EG T+ Y+ + ++ V+ITRLA GI GS L+Y +
Sbjct: 127 SLVERVRTGNFSEIIMATNPTVEGDGTSLYLSNLMQEFPVEITRLARGITSGSVLEYANR 186
Query: 189 GTIFEAIRSRTVL 201
I +A+ R L
Sbjct: 187 EIIADALTGRQRL 199
>gi|251772824|gb|EES53384.1| recombination protein RecR [Leptospirillum ferrodiazotrophum]
Length = 215
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 126/209 (60%), Gaps = 8/209 (3%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + ++L+ + R+PG G ++A R HL++ E LA A++ + ++ C
Sbjct: 7 MGSSLFPAPFQDLVDLFRRLPGIGTKTATRLAFHLLQSSESERQELASAVSTLKERLLPC 66
Query: 61 SICGNVDTTDP--------CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG 112
S C N+ + P CAIC+D RD++++IVVED+ L+++E+S YHVL G
Sbjct: 67 SECRNIVASPPPESPEVPRCAICLDPARDSTILIVVEDIQTLYSIEKSGEFRGRYHVLEG 126
Query: 113 SLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITR 172
LSPL+ I PE + ++ L++R+E IRE++ A S T +G+ TA Y+ +K + ++++R
Sbjct: 127 RLSPLEGIAPEMLRVRELLQRLENPDIREVVLATSPTTDGEATALYLSRLVKPLGIRVSR 186
Query: 173 LAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+A+GIP+G EL+Y+D+ T+ A+ R
Sbjct: 187 IAFGIPVGLELEYVDEVTLIRAVEGRHPF 215
>gi|116326907|ref|YP_796627.1| recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116332431|ref|YP_802149.1| recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|122279843|sp|Q04NX9|RECR_LEPBJ RecName: Full=Recombination protein recR
gi|122285243|sp|Q056Q1|RECR_LEPBL RecName: Full=Recombination protein recR
gi|116119651|gb|ABJ77694.1| Recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116126120|gb|ABJ77391.1| Recombinational DNA repair protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 197
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 118/197 (59%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +E ++ L+ +PG G +SA R + HL++ ++ + N NK+ C CG
Sbjct: 1 MANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ T+ C IC ++RD VVE D++ +E ++ + YHVL G +SPL+ IGP+D
Sbjct: 61 SYAETEICNICTSEKRDTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+ L+ERIE ++I+E++ A + T+EG TA Y+ +LK + V +TR+AYGI +G ++
Sbjct: 121 LRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIE 180
Query: 185 YLDDGTIFEAIRSRTVL 201
D T+ AIRSR L
Sbjct: 181 LADQYTLGRAIRSRLQL 197
>gi|89256705|ref|YP_514067.1| recombination protein RecR [Francisella tularensis subsp.
holarctica LVS]
gi|115315113|ref|YP_763836.1| recombination protein RecR [Francisella tularensis subsp.
holarctica OSU18]
gi|156502866|ref|YP_001428931.1| recombination protein RecR [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010458|ref|ZP_02275389.1| recombination protein RecR [Francisella tularensis subsp.
holarctica FSC200]
gi|254368012|ref|ZP_04984032.1| recombination protein recR [Francisella tularensis subsp.
holarctica 257]
gi|290954137|ref|ZP_06558758.1| recombination protein RecR [Francisella tularensis subsp.
holarctica URFT1]
gi|295312455|ref|ZP_06803227.1| recombination protein RecR [Francisella tularensis subsp.
holarctica URFT1]
gi|122324885|sp|Q0BL35|RECR_FRATO RecName: Full=Recombination protein recR
gi|122500482|sp|Q2A2I5|RECR_FRATH RecName: Full=Recombination protein recR
gi|166221939|sp|A7NDC2|RECR_FRATF RecName: Full=Recombination protein recR
gi|89144536|emb|CAJ79851.1| Recombination protein recR [Francisella tularensis subsp.
holarctica LVS]
gi|115130012|gb|ABI83199.1| recombination protein RecR [Francisella tularensis subsp.
holarctica OSU18]
gi|134253822|gb|EBA52916.1| recombination protein recR [Francisella tularensis subsp.
holarctica 257]
gi|156253469|gb|ABU61975.1| recombination protein RecR [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 200
Score = 262 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNTRTNI 200
>gi|310815373|ref|YP_003963337.1| recombination protein RecR [Ketogulonicigenium vulgare Y25]
gi|308754108|gb|ADO42037.1| recombination protein RecR [Ketogulonicigenium vulgare Y25]
Length = 196
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 102/195 (52%), Positives = 131/195 (67%), Gaps = 2/195 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+I LI ++AR+PG GPRSARRA LHLVKK+ QL+ PL AM + C CGN+
Sbjct: 4 SSDIARLIALMARVPGLGPRSARRAVLHLVKKRSQLMVPLGNAMQAVAQSARECLNCGNI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T D C IC D R I VVED+ DLWA+ER+ A YHVLGG+LS +D IGPE++
Sbjct: 64 STHDICPICADTARANGQICVVEDIDDLWAMERTGAFKGRYHVLGGTLSAIDAIGPEELR 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I L++R+ + I E+I A+ ATI+GQTTAHYI D L + ++ LA G+P+G ELDYL
Sbjct: 124 IPRLVDRVTTENITEVILALGATIDGQTTAHYIADHLS--GIIVSTLAQGVPIGGELDYL 181
Query: 187 DDGTIFEAIRSRTVL 201
DDGTI A+R+R L
Sbjct: 182 DDGTIGAALRARRQL 196
>gi|89056369|ref|YP_511820.1| recombination protein RecR [Jannaschia sp. CCS1]
gi|122497564|sp|Q28KG7|RECR_JANSC RecName: Full=Recombination protein recR
gi|88865918|gb|ABD56795.1| recombination protein RecR [Jannaschia sp. CCS1]
Length = 199
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 108/196 (55%), Positives = 137/196 (69%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T K+IE LI I+AR+PG GPRSARRA L L+KK+ L+ PLAE MA + C CGN
Sbjct: 4 TSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVNCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T D C IC+D +R I VVEDVADLWA+ER +A YHVLGG+LS LD +GPED+
Sbjct: 64 IGTGDLCEICMDVRRATGEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGPEDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L R+ + I E+I A++AT++GQTTAHYI D+L V ++ LA G+P+G ELDY
Sbjct: 124 RIPKLRARMADEGITEVILALNATVDGQTTAHYIADELAPTGVTLSSLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 184 LDDGTISAALRARKSL 199
>gi|258626251|ref|ZP_05721098.1| recombination protein RecR [Vibrio mimicus VM603]
gi|258581303|gb|EEW06205.1| recombination protein RecR [Vibrio mimicus VM603]
Length = 180
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 1/178 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP D
Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G
Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGS 180
>gi|7007421|dbj|BAA90838.1| RecR [Bacillus halodurans]
Length = 164
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 74/164 (45%), Positives = 110/164 (67%)
Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97
KE + A+A+ N+ K+ CS+C N+ TDPC IC D +RD SVI VV+D D+ A+
Sbjct: 1 MKEDDVLDFAKALVNVKRKLTYCSVCHNITDTDPCRICEDSKRDESVICVVQDAKDVIAM 60
Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157
E+ K + YHVL G++SP+D IGPEDI I LI+R++ I+E+I A + TIEG+ TA
Sbjct: 61 EKMKEYHGKYHVLHGAISPMDGIGPEDIKIPELIKRLQDDTIQEVIVATNPTIEGEATAM 120
Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
YI +K +K+TR+A+G+P+G +L+Y D+ T+ +A+ R L
Sbjct: 121 YISRLVKPTGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREL 164
>gi|254464756|ref|ZP_05078167.1| recombination protein RecR [Rhodobacterales bacterium Y4I]
gi|206685664|gb|EDZ46146.1| recombination protein RecR [Rhodobacterales bacterium Y4I]
Length = 199
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 104/198 (52%), Positives = 142/198 (71%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + EIE+LI ++A++PG GPRSARRA LHL++K+ LL PLA+ M+ + C C
Sbjct: 3 KNSNSEIEDLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLADVMSEVAATARECLNC 62
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN TT+ C IC D++R + VVEDVADLWA+ER+ YHVLGG+LS LD +GPE
Sbjct: 63 GNAGTTEICPICTDERRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAVGPE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G VK+T LA G+P+G EL
Sbjct: 123 DLRIPRLVDRVATEGVSEVILALNATIDGQTTAHYIADQLQG-QVKLTSLAQGVPIGGEL 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
DYLDDGTI A+ +R +
Sbjct: 182 DYLDDGTISAALSARKEI 199
>gi|114767708|ref|ZP_01446397.1| recombination protein RecR [Pelagibaca bermudensis HTCC2601]
gi|114540291|gb|EAU43391.1| recombination protein RecR [Roseovarius sp. HTCC2601]
Length = 197
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 102/192 (53%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
EI+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+AM + + C CGNV T
Sbjct: 6 EIDALIDLMAKLPGLGPRSARRAVLHLIRKRALLLQPLADAMQQVASSARECLNCGNVGT 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D +R I VVEDV+DLWA+ERS YHVLGG+LS LD +GPE++ I
Sbjct: 66 AEICPICADARRANGQICVVEDVSDLWAMERSGVFKGRYHVLGGTLSALDNVGPEELRIP 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ RI+ + I E+I A++AT++GQTTAHYI D+L+ V++T LA G+P+G ELDYLDD
Sbjct: 126 QLVSRIDGEAISEVILALNATVDGQTTAHYIADQLETR-VELTSLAQGVPIGGELDYLDD 184
Query: 189 GTIFEAIRSRTV 200
GTI A+ +R
Sbjct: 185 GTITAALNARKR 196
>gi|260426216|ref|ZP_05780195.1| recombination protein RecR [Citreicella sp. SE45]
gi|260420708|gb|EEX13959.1| recombination protein RecR [Citreicella sp. SE45]
Length = 197
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 140/201 (69%), Gaps = 4/201 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + EI+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+AM + C
Sbjct: 1 MSDR---NEIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLQPLADAMGAVATSAREC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNV T + C IC D++R + VVEDVADLWA+ERS YHVLGG+LS LD +
Sbjct: 58 LNCGNVGTAEICPICADERRGNGQLCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDSV 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE++ I L+ R+E + I E+I A++AT++GQTTAHYI D+L+ V++T LA G+P+G
Sbjct: 118 GPEELRIPQLVHRVETEAITEVILALNATVDGQTTAHYIADQLETR-VELTSLAQGVPIG 176
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGTI A+ +R +
Sbjct: 177 GELDYLDDGTITAALNARKRI 197
>gi|87307571|ref|ZP_01089715.1| recombinant protein RecR [Blastopirellula marina DSM 3645]
gi|87289741|gb|EAQ81631.1| recombinant protein RecR [Blastopirellula marina DSM 3645]
Length = 199
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 113/196 (57%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L+ A++PG G +SA R H+++ E LA+++ + V CS C N
Sbjct: 4 TTDSVTRLVDEFAKLPGIGRKSAERLAYHILRVHESEALALADSIRTVKQNVRYCSQCFN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ ++ C +C D +RD +++ +VE DL ALE+S LYHVL G ++PL+ IGP+ +
Sbjct: 64 LAESELCTVCQDTRRDQTLLCIVEQPRDLMALEQSGMFPGLYHVLLGRIAPLEGIGPDQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L++R+ K RE+I A + T EG TA +I + L + V +TRLA GI GS L++
Sbjct: 124 TIDALVDRVRAGKFREIIMATNPTTEGDGTALHISNLLAELPVTLTRLARGITSGSVLEF 183
Query: 186 LDDGTIFEAIRSRTVL 201
+ + +A+ R L
Sbjct: 184 TNKEILADALSGRQKL 199
>gi|313159174|gb|EFR58547.1| recombination protein RecR [Alistipes sp. HGB5]
Length = 198
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K +++++ L+++PG G R+A R +H+++ + + + + E++ N V C+ C N+
Sbjct: 2 SKLLQDVVGELSKLPGVGRRTALRLAIHILRMERESVAEMTESIDRFRNDVKYCAECNNL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC+D +RD + I VVE VAD+ ++E + LYHVLGG +SP+ I P D+
Sbjct: 62 SDEEVCPICLDDERDRTTICVVEQVADVLSIENTHQYKGLYHVLGGVISPMQGISPSDLK 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDY 185
I L ERI ++E+I AIS ++EG+TT Y+M++L+ VK+T +A GI G EL+Y
Sbjct: 122 IDLLTERIARGGVKEVILAISTSVEGETTLFYLMNRLRQFPGVKVTSIARGIGFGDELEY 181
Query: 186 LDDGTIFEAIRSRTV 200
+D+ TI A+R+R
Sbjct: 182 VDELTITHALRNRRE 196
>gi|198283701|ref|YP_002220022.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667448|ref|YP_002426330.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226726300|sp|B5EJE1|RECR_ACIF5 RecName: Full=Recombination protein recR
gi|226737869|sp|B7JC18|RECR_ACIF2 RecName: Full=Recombination protein recR
gi|198248222|gb|ACH83815.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519661|gb|ACK80247.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 199
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ +L R+PG GPRSA+R + L+ +K L+ LA A + V C C N+
Sbjct: 5 PSMDALVALLRRLPGIGPRSAQRISYELLVRKRDLMPQLAAAFQQAHAVVRFCERCNNLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
CA+C + RD S++ VVE ADL A+E + + VL G LSPLD IGPE + I
Sbjct: 65 EAPLCAVCRSEHRDRSILCVVESPADLRAIEDTGVFVGEFFVLMGHLSPLDGIGPEALHI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L R+ ++E+IFA + T+EG+ TA ++ + V I+R+A G+P+G EL+Y+D
Sbjct: 125 DRLSARLGETDLQEVIFATNPTLEGEATAQFLAGLV-PDGVTISRIARGVPVGGELEYVD 183
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ R +L
Sbjct: 184 RSTLGRALHGRRLL 197
>gi|119713123|gb|ABL97192.1| recombination protein RecR [uncultured marine bacterium EB0_49D07]
Length = 195
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 2/197 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
++ + LI+ L +PG G +SA+R L L+ K + LA+ + + C +C
Sbjct: 1 MSKDLLYELIEALTILPGVGKKSAQRMALFLLDKNKDGAVHLAKTLEECLETIQRCEVCR 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C IC D RD + VVE +D+ A+E + Y VL G LSP+D I P+D
Sbjct: 61 QLTSEPICRICSDSSRDVYSLCVVESPSDVLAIESTGGFKGRYFVLMGRLSPIDGISPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ I+ +I E+I A S+T+EG TA +I D L+ VK++R++YGIP+G EL+
Sbjct: 121 LGIPDLLRHIQHTQIEEVILATSSTVEGDATASFIKDHLQS--VKVSRISYGIPIGGELE 178
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D TI AI+ R +
Sbjct: 179 YVDGNTIARAIQGRIEI 195
>gi|187931732|ref|YP_001891717.1| recombination protein RecR [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691568|sp|B2SGT0|RECR_FRATM RecName: Full=Recombination protein recR
gi|187712641|gb|ACD30938.1| RecFOR complex, RecR component [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 200
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLNILQQIIADRKIDEVILAISPTVEGETTAHFISQMIVK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200
>gi|260432376|ref|ZP_05786347.1| recombination protein RecR [Silicibacter lacuscaerulensis ITI-1157]
gi|260416204|gb|EEX09463.1| recombination protein RecR [Silicibacter lacuscaerulensis ITI-1157]
Length = 197
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 104/196 (53%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +I+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+AM + C CGN
Sbjct: 3 SNSDIDALIDLMAKLPGLGPRSARRAVLHLIRKRALLLTPLADAMQQVAATARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC + R + VVEDVADLWA+ER+ YHVLGG+LS LD +GPED+
Sbjct: 63 VGTTDICDICNSEDRATGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDGVGPEDL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +R+ + I E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLRDRVTAENITEVILALNATVDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 182 LDDGTITAALRARKEL 197
>gi|91201432|emb|CAJ74492.1| strongly similar to recombination protein RecR [Candidatus Kuenenia
stuttgartiensis]
Length = 215
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 116/198 (58%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + NLI ++PG G ++A R +++K+ LA A+ ++ + +C++C
Sbjct: 16 NTYPQTVNNLISEFGKMPGIGQKTAERLACYVLKQPVDDAMKLAYAIRDVKKYMKICTVC 75
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
NV PC IC + +RD+S+I VVE ADL +E++ N YH+L G +SPL+ I P+
Sbjct: 76 FNVSENSPCHICSNLRRDSSIICVVEQFADLLTIEKTGKYNGHYHILQGHISPLEGIDPD 135
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I L++R++ ++E+I A + +EG TA YI +L+ VK+TR+A G+P GS L
Sbjct: 136 LLTIGRLLQRVKDGSVKEVILATNLNMEGDITAVYIHKQLQSFGVKVTRIARGLPTGSYL 195
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y + + +A+ R +
Sbjct: 196 EYANTAIVADAVSDRNEM 213
>gi|325846731|ref|ZP_08169646.1| recombination protein RecR [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481489|gb|EGC84530.1| recombination protein RecR [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 199
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 126/197 (63%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ ++P G +SA R + +V K ++ + ++A+ + +K+ C ICG
Sbjct: 3 LYPESLIKLIEQFQKLPTIGKKSAERLAMSIVGKDDESVEDFSKALLEVKSKIHPCKICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D R+ ++I V+EDV +L+A+E+S + YH+LGG +SP D + ED
Sbjct: 63 NLTEDEICGICKDVSREENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKAED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++RI+ + I+E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS L+
Sbjct: 123 LSIDKLLDRIDKENIKEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSNLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R +
Sbjct: 183 YFDQLTLERALEDRREI 199
>gi|126725866|ref|ZP_01741708.1| recombination protein RecR [Rhodobacterales bacterium HTCC2150]
gi|126705070|gb|EBA04161.1| recombination protein RecR [Rhodobacterales bacterium HTCC2150]
Length = 198
Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 107/196 (54%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
KEIENLI ++A++PG GPRSARRA LHL+KK+ QLL PL+ +M + C CGN
Sbjct: 4 ATKEIENLIDMMAKLPGLGPRSARRAVLHLIKKRGQLLAPLSASMQEVTATARECVSCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T+ C IC +R I VVEDVADLWA+ER++ YHVLGG+LS LD IGPE +
Sbjct: 64 IGTSVTCEICQSPKRATGEICVVEDVADLWAMERARVFKGRYHVLGGTLSALDAIGPEQL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
GI L+ RI+ + I E+I A++ATI+GQTTAHYI D+++G V +T LA G+P+G ELDY
Sbjct: 124 GIPRLLSRIKAEDITEVILALNATIDGQTTAHYIADQIEGH-VTVTSLAQGVPIGGELDY 182
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 183 LDDGTISAALRARKTF 198
>gi|332184290|gb|AEE26544.1| Recombination protein RecR [Francisella cf. novicida 3523]
Length = 200
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + V C
Sbjct: 1 MTSKIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANVRKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 AYCQALTEDDVCNICSNNNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I ++I E+I AIS T+EG+TTAH+I + D KI+R+ +G+P G
Sbjct: 121 GPSELKLDILEQIIAKREIDEVILAISPTVEGETTAHFISQMIAK-DTKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200
>gi|323144820|ref|ZP_08079391.1| recombination protein RecR [Succinatimonas hippei YIT 12066]
gi|322415407|gb|EFY06170.1| recombination protein RecR [Succinatimonas hippei YIT 12066]
Length = 199
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+E LIK L +PG GPRSA R HL+ ++ + LA+ + K+ LCS C +
Sbjct: 3 ASPLLEKLIKSLQIMPGIGPRSAVRIAYHLLDRRREESVQLADTLKEAVEKIGLCSHCRD 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC +R S + VVE +DL A+E S Y VL G LSP+D +GP +
Sbjct: 63 YSEEEVCPICASFKRKQSGQLCVVETPSDLLAVESSGNYFGQYFVLHGHLSPIDGVGPTE 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI LI+R+ +++ELI A + T+EG TA YI K ++ +++LA G+P+G +LD
Sbjct: 123 LGIDILIKRLSAGEVKELILATNPTVEGDATASYIAALAKRYNISVSKLASGVPLGGDLD 182
Query: 185 YLDDGTIFEAIRSRTV 200
+D+ TI ++ R
Sbjct: 183 NIDEQTIAASLAHRRP 198
>gi|255021194|ref|ZP_05293244.1| Recombination protein RecR [Acidithiobacillus caldus ATCC 51756]
gi|254969309|gb|EET26821.1| Recombination protein RecR [Acidithiobacillus caldus ATCC 51756]
Length = 199
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 114/195 (58%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
L ++L R+PG GPRS++R L+ +K +L+ LA A+ + + CS C N+
Sbjct: 4 SPSFTALTRLLRRLPGVGPRSSQRIAYDLLMRKRELMPALAMALQAAHEHIRSCSRCNNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ CAIC D QR ++ VVE DL A+E S A Y VL G LSPLD IGPED+
Sbjct: 64 CEAELCAICSDTQRQRELLCVVESPVDLAAIEESGAYGGDYFVLMGHLSPLDGIGPEDLH 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I R+ +RE+IFA ++T+EG+ TA ++ + V+ +R+A GIPMG EL+Y+
Sbjct: 124 IDRFTARLAEPGLREVIFATNSTLEGEATAQFLAGYV-PAGVRSSRIARGIPMGGELEYV 182
Query: 187 DDGTIFEAIRSRTVL 201
D GT+ A+ R L
Sbjct: 183 DRGTLGRALLGRRDL 197
>gi|329114768|ref|ZP_08243525.1| Recombination protein RecR [Acetobacter pomorum DM001]
gi|326695899|gb|EGE47583.1| Recombination protein RecR [Acetobacter pomorum DM001]
Length = 201
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 134/197 (68%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G+EIE LI++L R+PGFGPRSARR L+L+K+ + L PLA AM N + CS CG
Sbjct: 4 MGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLARAMERAGNAIKTCSSCG 63
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT +PC IC D RD +I VVE V DLWALER+ +Y VLGG+LSPL IGPED
Sbjct: 64 NLDTINPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIGPED 123
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183
+ + L E++ +RE+I A+ AT+EG TT H++MD+L V ++R+A G+PMG L
Sbjct: 124 LDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLASYGGVTVSRVAQGVPMGGAL 183
Query: 184 DYLDDGTIFEAIRSRTV 200
D LDDGT+ A+ +R
Sbjct: 184 DVLDDGTLAAALGARRP 200
>gi|332678503|gb|AEE87632.1| Recombination protein RecR [Francisella cf. novicida Fx1]
Length = 200
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KI +I +I+ L ++P G +S++R TL+L+ K + +A ++ + + C
Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLTLYLLDKSPETAIAIANSLLDATANIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I
Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G
Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200
>gi|299140392|ref|ZP_07033551.1| recombination protein RecR [Acidobacterium sp. MP5ACTX8]
gi|298597619|gb|EFI53798.1| recombination protein RecR [Acidobacterium sp. MP5ACTX8]
Length = 200
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 122/203 (60%), Gaps = 5/203 (2%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + + LI L ++PG G ++A+R H+++ + LA+++ + + LC
Sbjct: 1 MATRFA-EPMARLIDELRKLPGVGTKTAQRYAFHILRSSDSDATTLADSIRALKQHLHLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
SIC N+ DPCA C R+ +I VVE+ ++ A+E+++ +YHVL G+LSP++ +
Sbjct: 60 SICNNITDVDPCAYCTSPARNTHLICVVEEPTNINAIEKTRTYTGVYHVLHGTLSPVNGV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIP 178
GPE + +++L R+ + ELI A S T+EG+ TA Y++D ++ + I+R+A G+P
Sbjct: 120 GPEQLRLRNLWPRLAEAE--ELILATSPTVEGEATARYLLDDIRKTHPTLHISRIATGVP 177
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
GS+++Y D+ T+ A+ R L
Sbjct: 178 AGSDIEYADEVTMTRALEGRRDL 200
>gi|254476313|ref|ZP_05089699.1| recombination protein RecR [Ruegeria sp. R11]
gi|214030556|gb|EEB71391.1| recombination protein RecR [Ruegeria sp. R11]
Length = 199
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ EIENLI ++A++PG GPRSARRA LHL++K+ LL PLA+++ + C CGN
Sbjct: 5 STSEIENLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLADSITEVAATARECLNCGN 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T D C IC D +R + VVEDV+DLWA+ER+ YHVLGG+LS LD +GP+D+
Sbjct: 65 IGTNDICPICEDNERANGELCVVEDVSDLWAMERAGVFKGRYHVLGGTLSALDAVGPDDL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + + E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDY
Sbjct: 125 RIPRLLDRVPAEAVTEVILALNATIDGQTTAHYIADQLSG-QVRLTSLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LD+GTI A+R+R +
Sbjct: 184 LDEGTISAALRARKEI 199
>gi|256545278|ref|ZP_05472643.1| recombination protein RecR [Anaerococcus vaginalis ATCC 51170]
gi|256399105|gb|EEU12717.1| recombination protein RecR [Anaerococcus vaginalis ATCC 51170]
Length = 199
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 123/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ ++P G +SA R + +V + + + ++++ + +K+ C ICG
Sbjct: 3 LYPESLNKLIEQFQKLPTIGKKSAERLAMSIVGRDLESVEEFSKSLLEVKSKIHPCKICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D R+ + I V+EDV +L+A+E+S + YH+LGG +SP D + ED
Sbjct: 63 NLTEDEICGICKDISREENTICVIEDVRNLYAIEKSSVYHGKYHILGGLISPSDNVKAED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++RI+ + I E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS L+
Sbjct: 123 LSIDKLLDRIDKENINEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSNLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R +
Sbjct: 183 YFDQLTLERALEDRREI 199
>gi|212696575|ref|ZP_03304703.1| hypothetical protein ANHYDRO_01113 [Anaerococcus hydrogenalis DSM
7454]
gi|212676431|gb|EEB36038.1| hypothetical protein ANHYDRO_01113 [Anaerococcus hydrogenalis DSM
7454]
Length = 199
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 124/197 (62%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + LI+ ++P G +SA R + +V K ++ + ++A+ + +K+ C ICG
Sbjct: 3 LYPESLIKLIEQFQKLPTIGKKSAERLAMSIVGKDDESVEEFSKALMEVKSKIHPCKICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D R ++I V+EDV +L+A+E+S + YH+LGG +SP D + ED
Sbjct: 63 NLTEDEICGICKDVSRQENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKAED 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L++RI+ + I E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS L+
Sbjct: 123 LSIDKLLDRIDKENINEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSNLE 182
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ A+ R +
Sbjct: 183 YFDQLTLERALEDRREI 199
>gi|159043201|ref|YP_001531995.1| recombination protein RecR [Dinoroseobacter shibae DFL 12]
gi|189029360|sp|A8LQA8|RECR_DINSH RecName: Full=Recombination protein recR
gi|157910961|gb|ABV92394.1| recombination protein RecR [Dinoroseobacter shibae DFL 12]
Length = 199
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 131/196 (66%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K+IE LI ++AR+PG GPRSARRA L L+ K +LL PL EAM + C CGN
Sbjct: 4 APKDIETLIDLMARLPGLGPRSARRAVLFLLGKNRRLLAPLGEAMTAVAQTARDCLNCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T+D C IC ++R I VVEDVADLWA+ER+ YHVLGG+LS LD +GPE++
Sbjct: 64 IGTSDICDICTSEKRATGEICVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAVGPEEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +R + E+I A+ AT++GQTTAHYI + L+G V +T LA G+P+G ELDY
Sbjct: 124 RIPKLRDRAVSEGATEIILALGATVDGQTTAHYIAEALEGTGVAVTSLAQGVPIGGELDY 183
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 184 LDDGTITAALRARKSF 199
>gi|296284447|ref|ZP_06862445.1| recombination protein RecR [Citromicrobium bathyomarinum JL354]
Length = 197
Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 107/197 (54%), Positives = 146/197 (74%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +EIE L LAR+PG GPRSARRA LHLVKK+E L L +A+ ++ + + C ICG
Sbjct: 1 MASQEIETLASALARLPGLGPRSARRAVLHLVKKRETALPALLDALLSVQDTLEECRICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NVDT DPC IC D +RDA I VVEDVADLWAL+R+K + +HVLGG LS LD + PED
Sbjct: 61 NVDTQDPCGICSDPRRDAKSICVVEDVADLWALDRAKLFSGTFHVLGGRLSALDGVRPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I L+ R+E + E++ A++AT+EGQTTAHY+ ++L+ V+IT+LA+G+P+G ELD
Sbjct: 121 LAIPGLLARVEAG-VDEVVLAMNATLEGQTTAHYLAERLEDFPVRITQLAHGLPVGGELD 179
Query: 185 YLDDGTIFEAIRSRTVL 201
YLD+GT+ +A+R+R L
Sbjct: 180 YLDEGTLAQALRARRPL 196
>gi|126733478|ref|ZP_01749225.1| recombination protein RecR [Roseobacter sp. CCS2]
gi|126716344|gb|EBA13208.1| recombination protein RecR [Roseobacter sp. CCS2]
Length = 197
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 104/194 (53%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++++NLI ++A++PG GPRSARRA LHL+KK+ +L PLA+AM + V C CGNV
Sbjct: 6 EDLDNLIALMAKLPGLGPRSARRAVLHLIKKRSLVLLPLADAMQRVGATVRECLNCGNVC 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
TTD C IC ++R I VVEDVADLWA+ER++ YHVLGG+LS LD IGP+++ I
Sbjct: 66 TTDICDICSTEKRATGQIAVVEDVADLWAMERAQVFKGRYHVLGGTLSALDAIGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+RI+ + + E+I A+ ATI+GQTTAHYI D+L + +T LA G+P+G ELDYLD
Sbjct: 126 PKLIDRIKAENVTEVILALGATIDGQTTAHYIADQL--PGITVTSLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKAL 197
>gi|163784538|ref|ZP_02179397.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
gi|159880193|gb|EDP73838.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
Length = 199
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K++ ++N I+ ++ +PG+G +SA+R +L+K + +++ + K+ C
Sbjct: 1 MEKQVLPSALQNAIEHISNLPGYGEKSAQRFVENLLKLPKGESIETIKSLLELLEKIHPC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICG + + C+IC ++R+ + I VVE+ D +A+E++ LYHVL G LSPL+ I
Sbjct: 61 KICGLLTENEICSICSSEERNKTTICVVEESFDAFAIEKTGKYTGLYHVLHGKLSPLEGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
ED+ I SL++R+ + ++E+I A + T+EG+ TA YI + LK +V+I+R+AYG+P G
Sbjct: 121 TAEDLNISSLLDRL--EGVKEIIIATNPTVEGEATATYIYNLLKNKNVEISRIAYGLPFG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+ L+ D T+ +A+ + L
Sbjct: 179 ATLENADVFTLSKALEGKQKL 199
>gi|254510299|ref|ZP_05122366.1| recombination protein RecR [Rhodobacteraceae bacterium KLH11]
gi|221534010|gb|EEE36998.1| recombination protein RecR [Rhodobacteraceae bacterium KLH11]
Length = 197
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +I+NLI ++A++PG GPRSARRA LHL++K+ LL PL++AM + C CGN
Sbjct: 3 SNSDIDNLIDLMAKLPGLGPRSARRAVLHLIRKRALLLTPLSDAMQQVAVTARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC + R + VVEDVADLWA+ER+ YHVLGG+LS LD +GP+++
Sbjct: 63 VGTTDICDICNSEARATGELCVVEDVADLWAMERAGIFKGRYHVLGGTLSALDGVGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +R+ + I E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLKDRVVAEGITEVILALNATVDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 182 LDDGTITAALRARKEL 197
>gi|56698391|ref|YP_168764.1| recombination protein RecR [Ruegeria pomeroyi DSS-3]
gi|73621515|sp|Q5LMJ4|RECR_SILPO RecName: Full=Recombination protein recR
gi|56680128|gb|AAV96794.1| recombination protein RecR [Ruegeria pomeroyi DSS-3]
Length = 198
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ K+I+ LI+++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN
Sbjct: 4 STKDIDALIELMARLPGLGPRSARRAVLHLIRKRALLLTPLADLMGQVAATARECLNCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V T+D C IC D++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++
Sbjct: 64 VGTSDICDICTDERRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDGVGPDEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L +R+ + I E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDY
Sbjct: 124 RIPRLADRVTAEAISEVILALNATIDGQTTAHYIADQLGGR-VRLTSLAQGVPIGGELDY 182
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R L
Sbjct: 183 LDDGTISAAMRARKEL 198
>gi|196231422|ref|ZP_03130281.1| recombination protein RecR [Chthoniobacter flavus Ellin428]
gi|196224758|gb|EDY19269.1| recombination protein RecR [Chthoniobacter flavus Ellin428]
Length = 203
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 114/200 (57%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M++ I+ LI L R+PG GPRSA R L +++ ++ ++ + + + C
Sbjct: 1 MKRIAYPAAIQALIGELKRLPGIGPRSAERIALWMLQSRDARPLEVSRVIREVQESIHAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CG T C IC D RDA+ I VVE D+ LER+ YH LGG +SPLD +
Sbjct: 61 PRCGFFTTDTLCEICADTTRDAAQICVVEQPTDILPLERTGVFLGRYHALGGRISPLDHV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPE++ I +LIERI+ + E+I A+ + +EG+ TA+Y+ L+ + V +TRLA G+P G
Sbjct: 121 GPEELRIDALIERIKAEAPSEIILALGSDVEGEATANYLATLLRELPVTVTRLAQGLPAG 180
Query: 181 SELDYLDDGTIFEAIRSRTV 200
L+ D+ T+ A+ RT
Sbjct: 181 GGLEQADELTLSRALAGRTA 200
>gi|262200456|ref|YP_003271664.1| recombination protein RecR [Gordonia bronchialis DSM 43247]
gi|262083803|gb|ACY19771.1| recombination protein RecR [Gordonia bronchialis DSM 43247]
Length = 203
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 5/202 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I++LI LA+ PG GP+ A+R L+ ++ + L A+ + + V C+ CG
Sbjct: 1 MYEGPIQDLIDELAKQPGLGPKGAQRIAFALLAGEKSEIDRLVAALGRVRDDVTFCAECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
NV C IC D +RDA+ I VVE+ D+ A+ER+K N YHVLGG+L PL IGP+
Sbjct: 61 NVSANRLCRICSDARRDATKICVVEEPKDVHAIERTKEFNGRYHVLGGALDPLSGIGPDQ 120
Query: 125 IGIQSLI----ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+ I+ L+ + + E+I A EG+ TA Y++ LK + +TRLA G+PM
Sbjct: 121 LRIRELLRRLANTDDGNDVTEIIVATDPNTEGEATATYLLRMLKEFPGLSVTRLASGLPM 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +L++ D+ T+ A+ R VL
Sbjct: 181 GGDLEFADELTLGRALSGRRVL 202
>gi|21230462|ref|NP_636379.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769544|ref|YP_244306.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992752|ref|YP_001904762.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. B100]
gi|24212228|sp|Q8PBW4|RECR_XANCP RecName: Full=Recombination protein recR
gi|81304501|sp|Q4URN7|RECR_XANC8 RecName: Full=Recombination protein recR
gi|21112026|gb|AAM40303.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574876|gb|AAY50286.1| recombination protein RecR [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734512|emb|CAP52722.1| Recombination protein RecR [Xanthomonas campestris pv. campestris]
Length = 197
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 115/194 (59%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+E LI+ +PG G +SA+R H+++++ + LA A+AN KV C C +
Sbjct: 2 SSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALANAVEKVGHCVQCRDF 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
++ CAIC + RD + VVE AD A+E + +Y +L G LSPLD IGP ++G
Sbjct: 62 TESEVCAICANSGRDRQQLCVVESPADRLAIEHATGYRGVYFILQGRLSPLDGIGPRELG 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+
Sbjct: 122 LDRLAERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHSVRPSRLAQGMPLGGELEYV 181
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A +R+
Sbjct: 182 DRGTLSHAFGTRSE 195
>gi|114565608|ref|YP_752762.1| recombination protein RecR [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122319210|sp|Q0B0W3|RECR_SYNWW RecName: Full=Recombination protein recR
gi|114336543|gb|ABI67391.1| DNA replication and repair protein RecR [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 197
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 117/195 (60%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +ENLI L ++PG GP++A+R L+++K E LA+A+ + KV CS CG +
Sbjct: 4 ARPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRCGYL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC IC D+ RD S+I + E+ +D+ A+ER+ Y VL + ++ G ED+
Sbjct: 64 TDFDPCLICSDESRDKSLICIGEESSDVIAIERTG-FRGQYFVLNKDFNLMEDKGLEDLN 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L +R+ +I+E++ A++ ++G+ + ++ VK+TRLA+G+P+G ++++
Sbjct: 123 LKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGDIEFA 182
Query: 187 DDGTIFEAIRSRTVL 201
D+ T+ A+ R L
Sbjct: 183 DEITLRRALEGRKEL 197
>gi|296533584|ref|ZP_06896152.1| recombination protein R [Roseomonas cervicalis ATCC 49957]
gi|296266092|gb|EFH12149.1| recombination protein R [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 259 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/194 (50%), Positives = 134/194 (69%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++E L+ +LAR+PG G RSARRA L L++ L+ PLA+A+ V C ICGN+
Sbjct: 6 PDQVERLVAMLARLPGLGRRSARRAALKLLQDPGGLMLPLAQALHETAEAVRPCRICGNL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DT DPC IC D R+ V+ VVE V+DLWAL+R+ LYHVLGG LS L +GPED+
Sbjct: 66 DTEDPCRICTDPGREQDVVCVVEGVSDLWALQRAHVHRGLYHVLGGVLSALSGVGPEDLR 125
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I +L+ER+ +IRE+I A+ AT+EG TTAHY+ D+L+ + V +TRLA G+PMG LD +
Sbjct: 126 ITALLERVAAGEIREVILALPATVEGATTAHYLTDRLRPMGVAVTRLAQGVPMGGALDVM 185
Query: 187 DDGTIFEAIRSRTV 200
DDGT+ A+++R
Sbjct: 186 DDGTLAAALKARRP 199
>gi|149203325|ref|ZP_01880295.1| recombination protein RecR [Roseovarius sp. TM1035]
gi|149143158|gb|EDM31197.1| recombination protein RecR [Roseovarius sp. TM1035]
Length = 197
Score = 259 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 103/196 (52%), Positives = 142/196 (72%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + + C+ CGN
Sbjct: 3 STRDIDALIDMMARLPGLGPRSARRAVLHLIRKRALLLSPLAKLMQTVADTARECATCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TT+ C IC + +R I VVEDVADLWA+ER +A YHVLGG+LS LD++GPE +
Sbjct: 63 IGTTEICDICTNAKRANGQICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDQVGPEVL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I +L+ R++ + I E+I A++AT+EGQTTAHYI D+L G V +T LA G+P+G ELDY
Sbjct: 123 RIPALLARVDSEAITEVILALNATVEGQTTAHYIADQLDGR-VTLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+ +R L
Sbjct: 182 LDDGTISAALSARKRL 197
>gi|188995254|ref|YP_001929506.1| recombination protein RecR [Porphyromonas gingivalis ATCC 33277]
gi|229470335|sp|B2RKL4|RECR_PORG3 RecName: Full=Recombination protein recR
gi|188594934|dbj|BAG33909.1| putative recombination protein RecR [Porphyromonas gingivalis ATCC
33277]
Length = 207
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 119/201 (59%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +K + +E I A +PG G ++A R L+L+++ + A A+ ++ + C
Sbjct: 1 MIQKYPSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N+ + C IC D RD S + VVE++ D+ A+E + LYHVLGG +SP+D I
Sbjct: 61 RRCHNISDSGVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP D+ I SL+ R+ ++I E+I A+S T+EG TT ++ KL+ V+++ +A GI +G
Sbjct: 121 GPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLESTGVRVSVIARGIAIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y D+ T+ +I +RT
Sbjct: 181 DEIEYADEITLGRSILNRTDF 201
>gi|89069706|ref|ZP_01157042.1| recombination protein RecR [Oceanicola granulosus HTCC2516]
gi|89044652|gb|EAR50763.1| recombination protein RecR [Oceanicola granulosus HTCC2516]
Length = 197
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 133/195 (68%), Gaps = 2/195 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K+IE LI ++A++PG GPRSARRA LHL+KK+ LL PLAEAMA + C CGN+
Sbjct: 5 AKDIEALIDLMAKLPGLGPRSARRAVLHLIKKRGVLLTPLAEAMARVGANARECLNCGNI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T D C IC +R + VVEDVADLWA+ER+ YHVLGG+LS LD +GP+D+
Sbjct: 65 GTGDVCDICTSNKRATGQVCVVEDVADLWAMERAAVFGGRYHVLGGTLSALDGVGPDDLR 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L +RI + + E+I A+ ATI+GQTTAHYI D L V +T LA G+P+G ELDYL
Sbjct: 125 LPKLKDRIASEHVTEVILALGATIDGQTTAHYIADALD--GVTVTSLAQGVPVGGELDYL 182
Query: 187 DDGTIFEAIRSRTVL 201
DDGTI A+ +R L
Sbjct: 183 DDGTITAALNARKSL 197
>gi|258545553|ref|ZP_05705787.1| recombination protein RecR [Cardiobacterium hominis ATCC 15826]
gi|258519253|gb|EEV88112.1| recombination protein RecR [Cardiobacterium hominis ATCC 15826]
Length = 201
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 114/195 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L +PG G ++A+R L L+ + Q LA+A+ + + C C N
Sbjct: 3 FSPSFDQLVQALTCLPGVGNKTAQRMALRLLLDQPQKAKQLADAIDHALHTAQRCHKCRN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ D C IC + +RDAS + VVE AD+ A+E+S Y VL G +SPLD IGP ++
Sbjct: 63 ISDADLCLICANPKRDASTLCVVEAPADVLAIEQSTDYRGQYFVLMGHISPLDGIGPIEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L ++ I+EL+ A ++T+EG+TTA+++ + +V TRLA+G+PMG EL Y
Sbjct: 123 GMDILDRQLATGDIKELVLATNSTLEGETTAYFLAELAAKHNVPATRLAHGVPMGGELAY 182
Query: 186 LDDGTIFEAIRSRTV 200
+D T+ A +R+
Sbjct: 183 IDKSTLSLAFNTRSP 197
>gi|114568988|ref|YP_755668.1| DNA replication and repair protein RecR [Maricaulis maris MCS10]
gi|122316784|sp|Q0ASK7|RECR_MARMM RecName: Full=Recombination protein recR
gi|114339450|gb|ABI64730.1| DNA replication and repair protein RecR [Maricaulis maris MCS10]
Length = 201
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 143/200 (71%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+ G EIE LI +LA++PG GPRSARRA L+L+ KK+ L+ PLAEA+A+ +K+ C
Sbjct: 1 MKTASAGPEIERLISLLAKLPGLGPRSARRAALNLLGKKDALMRPLAEALADAADKIRAC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGN+D +DPC +C R + I VVE V DLWALER+ A YHVLGG LS LD +
Sbjct: 61 SECGNMDVSDPCTVCAAPNRLDAAICVVETVGDLWALERAGAFKGRYHVLGGVLSALDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
PED+ I L+ER +++ E++ A++AT++GQTTAHY+ D++ G +V IT LA G+P+G
Sbjct: 121 RPEDLNITKLVERSAREEVSEIVLALNATVDGQTTAHYLADRMAGCNVSITSLARGVPVG 180
Query: 181 SELDYLDDGTIFEAIRSRTV 200
ELDYLDDGT+ A RSR+
Sbjct: 181 GELDYLDDGTLAAAFRSRST 200
>gi|259415556|ref|ZP_05739477.1| recombination protein RecR [Silicibacter sp. TrichCH4B]
gi|259348786|gb|EEW60548.1| recombination protein RecR [Silicibacter sp. TrichCH4B]
Length = 199
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/201 (52%), Positives = 143/201 (71%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +IE LI ++A++PG GPRSARRA LHL++K+ +L PLA+AM + C
Sbjct: 1 MAAQDNS-DIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMGRVAETAREC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNV T+D CA+C D+ R + VVEDVADLWA+ER+ YHVLGG+LS LD +
Sbjct: 60 LNCGNVGTSDICALCADETRANGELCVVEDVADLWAMERAGVFRGRYHVLGGTLSALDAV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G VK+T LA G+P+G
Sbjct: 120 GPEDLRIPRLVDRVATEGVNEVILALNATIDGQTTAHYIADQLEGR-VKLTSLAQGVPIG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGTI A+R+R +
Sbjct: 179 GELDYLDDGTISAALRARKEI 199
>gi|291515277|emb|CBK64487.1| DNA replication and repair protein RecR [Alistipes shahii WAL 8301]
Length = 198
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K +++++ L+++PG G R+A R +H+++ + + + E++ N++ CS C N+
Sbjct: 2 SKLLQDVVGELSKLPGVGRRTALRLAIHILRMERDSVAEMTESIDRFRNEIRYCSQCNNL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D++RD + I VVE VAD+ ++E ++ +YHVLGG +SP+ I P D+
Sbjct: 62 SDEEVCPICADRERDHATICVVEQVADVLSVENTRQYRGMYHVLGGVISPMQGISPSDLK 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDY 185
I L ERI ++E+I AIS ++EG+TT Y+M++L+ +K+T +A GI G EL+Y
Sbjct: 122 IDLLCERIARGGVKEVILAISTSVEGETTLFYLMNRLRQFPGLKVTSIARGIGFGDELEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ TI A+ +R +
Sbjct: 182 VDELTITHALMNRREI 197
>gi|187251872|ref|YP_001876354.1| recombinational DNA repair protein [Elusimicrobium minutum Pei191]
gi|186972032|gb|ACC99017.1| Recombinational DNA repair protein [Elusimicrobium minutum Pei191]
Length = 197
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 2/196 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K + L++ L R+PG GPR A R + + +K + + A++ + + LCSIC
Sbjct: 2 KSFDRLVRALRRLPGVGPRQAERFSAYFLKTSDSEIDEFINALSALRENIHLCSICFAYS 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC D R+ +I VVED D+ A+E++ A LYHVL G+LSP+D G E+I I
Sbjct: 62 EDGVCDICEDSSRERDIICVVEDPQDIEAIEKTGAFKGLYHVLHGALSPIDGRGVENIKI 121
Query: 128 QSLIERIEVKK--IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ LIERI + +RE+I A EG+TTA YI D L+G+ K++R+ YG+P+G +LDY
Sbjct: 122 RELIERIHNSQTPVREVIIATDPDTEGETTALYIADALRGLVDKVSRIGYGVPLGGDLDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LD+ T+ +++ RT L
Sbjct: 182 LDEMTLTYSLKGRTKL 197
>gi|255264134|ref|ZP_05343476.1| recombination protein RecR [Thalassiobium sp. R2A62]
gi|255106469|gb|EET49143.1| recombination protein RecR [Thalassiobium sp. R2A62]
Length = 197
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 104/196 (53%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K+I++LI+++A++PG GPRSARRA LHL+KK+ L PLA+ M + C CGN
Sbjct: 4 ATKDIDDLIEMMAKLPGLGPRSARRAVLHLIKKRSLLFTPLADTMQTVAATARECLNCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C+IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 64 VGTTDICSICESEKRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPDEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI RI+ ++I E+I A++ATI+GQTTAHYI D+L + +T LA G+P+G ELDY
Sbjct: 124 RIPKLITRIQTEEITEVILALNATIDGQTTAHYIADQL--PTITVTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 182 LDDGTITAALRARKTF 197
>gi|168700666|ref|ZP_02732943.1| recombinant protein RecR [Gemmata obscuriglobus UQM 2246]
Length = 201
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 107/192 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I L++ L ++PG GP+SA R L+ + LA+A+ + ++V C C N+
Sbjct: 10 IAGLLEELTKLPGVGPKSAERIAHFLLAGDRRHAVELADALRAVADRVRPCKECFNLTDG 69
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D +RD ++ VVE D+ + ER+ LYHVLGG L+PLD +GP+ + +
Sbjct: 70 ELCPICSDPKRDGGLLCVVETPRDVNSFERAGNFRGLYHVLGGRLAPLDGMGPDRLTFTA 129
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ER+ +RE+I A S T+EG TA L V++TRLA G+P GS L+ +
Sbjct: 130 LVERVRRGGVREVILATSPTLEGDGTALLASTVLAQTGVQVTRLARGLPSGSSLELANAQ 189
Query: 190 TIFEAIRSRTVL 201
+ EA+ R
Sbjct: 190 MLAEALDGRRNF 201
>gi|99080005|ref|YP_612159.1| recombination protein RecR [Ruegeria sp. TM1040]
gi|122398457|sp|Q1GKB9|RECR_SILST RecName: Full=Recombination protein recR
gi|99036285|gb|ABF62897.1| recombination protein RecR [Ruegeria sp. TM1040]
Length = 199
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 106/201 (52%), Positives = 143/201 (71%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + +IE LI ++A++PG GPRSARRA LHL++K+ +L PLA+AM+ + C
Sbjct: 1 MAAQDNS-DIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETAREC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNV T+D CA+C D+ R + VVEDVADLWA+ER+ YHVLGG+LS LD I
Sbjct: 60 LNCGNVGTSDICALCEDETRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAI 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L G VK+T LA G+P+G
Sbjct: 120 GPEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQLSGR-VKLTSLAQGVPIG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGTI A+R+R +
Sbjct: 179 GELDYLDDGTISAALRARKEI 199
>gi|86140178|ref|ZP_01058740.1| recombination protein RecR [Roseobacter sp. MED193]
gi|85823115|gb|EAQ43328.1| recombination protein RecR [Roseobacter sp. MED193]
Length = 199
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 145/201 (72%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M EIE+LI ++A++PG GPRSARRA LHL++K+ LL PLAE+++ + + C
Sbjct: 1 MNDDSIS-EIEHLIALMAKLPGMGPRSARRAVLHLIRKRTLLLTPLAESLSQVASSAREC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNV T D C IC D++R I VVE V+DLWA+ER+ + YHVLGG+LS LD I
Sbjct: 60 LNCGNVGTQDICGICSDERRANGEICVVETVSDLWAMERAASFKGRYHVLGGTLSALDAI 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+++ I L++R+ + +RE+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G
Sbjct: 120 GPDELRIPRLVDRVASEGVREVILALNATIDGQTTAHYIADQLEG-QVQLTTLAQGVPIG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLDDGTI A+++R L
Sbjct: 179 GELDYLDDGTIIAALKARKTL 199
>gi|320106729|ref|YP_004182319.1| recombination protein RecR [Terriglobus saanensis SP1PR4]
gi|319925250|gb|ADV82325.1| recombination protein RecR [Terriglobus saanensis SP1PR4]
Length = 199
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI L ++PG G +SA+R H+++ + L+ A+ N+ + LCS+C N
Sbjct: 4 FAPPMSRLIDELRKLPGVGSKSAQRLAFHILRTSQTDADLLSAAILNLKATLHLCSVCNN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC C R I V+E+ ++ A+ERS+ N +YHVL G+LSP++ +GPED+
Sbjct: 64 ITDVDPCTFCTSPTRSHRTICVLEEPTNIAAVERSRTYNGVYHVLHGTLSPVNGVGPEDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSEL 183
I +L+ R+ E+I A+S T EG+ TA Y+ ++ D++++R+A G+P GS++
Sbjct: 124 RIGNLLNRLAEAD--EIILALSPTTEGEATATYLATEIHRTRRDLRVSRIATGVPAGSDI 181
Query: 184 DYLDDGTIFEAIRSRTVL 201
+Y D+ T+ AI +R L
Sbjct: 182 EYADEITLTRAIENRRDL 199
>gi|189485280|ref|YP_001956221.1| recombination protein RecR [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|226739009|sp|B1GZS8|RECR_UNCTG RecName: Full=Recombination protein recR
gi|170287239|dbj|BAG13760.1| recombination protein RecR [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 198
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 120/195 (61%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ +E ++ I+ ++PG G + A R + H++K + + L +++ N + CSIC N+
Sbjct: 4 PRPVEKMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSICCNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC IC D R+ +++ VVE DL A+ + + LY VLGG+LSPLD +GP+DI
Sbjct: 64 SEHDPCPICSDVTREKNIVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGPDDIR 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I LI+R++ I E+I A A +G+ TA Y+ D +K + +K+TRL YG+P+G +++Y
Sbjct: 124 IDKLIKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGDIEYA 183
Query: 187 DDGTIFEAIRSRTVL 201
D+ TI AI R +
Sbjct: 184 DEITISRAIAGRKEM 198
>gi|149916414|ref|ZP_01904933.1| recombination protein RecR [Roseobacter sp. AzwK-3b]
gi|149809684|gb|EDM69538.1| recombination protein RecR [Roseobacter sp. AzwK-3b]
Length = 197
Score = 257 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 101/195 (51%), Positives = 137/195 (70%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI+++A++PG GPRSARRA LHL+ K++ L PLA+ M + C CGN
Sbjct: 3 SNRDIDALIEMMAKLPGLGPRSARRAVLHLIAKRDLQLIPLADLMQRVAATARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TT+ C IC ++R I VVEDVADLWA+ER A YHVLGG+LS LD++GPE +
Sbjct: 63 IGTTEICDICAAEKRANGQICVVEDVADLWAMERGHAFKGRYHVLGGTLSALDQVGPEQL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R+ + I E+I A++AT+EGQTTAHYI D+L G V +T LA G+P+G ELDY
Sbjct: 123 RIPQLIDRVTAESITEVILALNATVEGQTTAHYIADQLDGR-VTLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI A+ +R
Sbjct: 182 LDDGTIGAALAARKQ 196
>gi|163732697|ref|ZP_02140142.1| recombination protein RecR [Roseobacter litoralis Och 149]
gi|161394057|gb|EDQ18381.1| recombination protein RecR [Roseobacter litoralis Och 149]
Length = 197
Score = 257 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ K+I+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+ + + C CGN
Sbjct: 3 STKDIDALIDLMAKLPGLGPRSARRAVLHLIRKRSLLLIPLADTLQAVAETARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++
Sbjct: 63 VGTTDICDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAVGPQEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + I E+I A++ATI+GQTTAHYI D L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 182 LDDGTITAAMRARKSF 197
>gi|58585003|ref|YP_198576.1| recombinational DNA repair protein RecR [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|73621530|sp|Q5GRP0|RECR_WOLTR RecName: Full=Recombination protein recR
gi|58419319|gb|AAW71334.1| Recombinational DNA repair protein RecR [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 201
Score = 257 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 134/191 (70%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA ++ + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASSIKELADLIIECKVCGNLDTQ 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + +YHVLGG LS ++ IGPE + + +
Sbjct: 65 SPCSICTNPKRDTKLMCVVEELGDLWAFEKGSIYSGMYHVLGGRLSAINGIGPEKLNLDN 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+ +R+ KI E+I AI+ T+EGQ T YI++ LK +DVK++RLA GIPMG E+DYLD+G
Sbjct: 125 IPKRVTEFKIEEVIIAINPTLEGQVTVQYIIESLKNLDVKVSRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSRTV 200
T+ A+ SR
Sbjct: 185 TLKAALTSRQE 195
>gi|83951297|ref|ZP_00960029.1| recombination protein RecR [Roseovarius nubinhibens ISM]
gi|83836303|gb|EAP75600.1| recombination protein RecR [Roseovarius nubinhibens ISM]
Length = 197
Score = 257 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ K+I+ LI ++A++PG GPRSARRA LHL++K+E L PLA+ M + C CGN
Sbjct: 3 STKDIDALIDMMAKLPGLGPRSARRAVLHLIRKREHKLRPLADLMQIVAATARECDRCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC D +R ++ VVEDVADLWA+ER+ A YHVLGG+LS LD++GP+++
Sbjct: 63 VGTTDICDICRDDRRATGLLCVVEDVADLWAMERAGAFKGRYHVLGGTLSALDQVGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ + I E+I A++AT++GQTTAHYI D+++ V +T LA G+P+G ELDY
Sbjct: 123 RIPGLVARLAEENITEVILALNATVDGQTTAHYIADQIEDR-VTLTSLAKGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+ +R
Sbjct: 182 LDDGTITAALSARKAF 197
>gi|163744804|ref|ZP_02152164.1| recombination protein RecR [Oceanibulbus indolifex HEL-45]
gi|161381622|gb|EDQ06031.1| recombination protein RecR [Oceanibulbus indolifex HEL-45]
Length = 197
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 144/196 (73%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI+++A++PG GPRSARRA LHL++K+ LL PL++ M + C CGN
Sbjct: 3 STRDIDALIELMAKLPGLGPRSARRAVLHLIRKRALLLTPLSDLMQTVAVTARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 VGTTDVCDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++RI+ +++ E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLVDRIDTEEVTEVILALNATIDGQTTAHYIADQLEGR-VRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+++R L
Sbjct: 182 LDDGTITAAMQARKSL 197
>gi|325111243|ref|YP_004272311.1| DNA replication and repair protein RecR [Planctomyces brasiliensis
DSM 5305]
gi|324971511|gb|ADY62289.1| DNA replication and repair protein RecR [Planctomyces brasiliensis
DSM 5305]
Length = 203
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 2/203 (0%)
Query: 1 MQKKI--TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
M+++ G + L+ A +PG G +SA R ++V K+ L +A+ + +
Sbjct: 1 MEQQSHPYGPSVARLVDEFAEMPGIGRKSAERLAQYVVNLKKPAAARLIQAIDAVKRSIR 60
Query: 59 LCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
C +C + + C IC D +R++S++ VVE D+ +LE S YHVL G LSPL+
Sbjct: 61 RCDVCHTLTEAETCEICSDPRRESSLVCVVEQPRDVISLEASGVFQGKYHVLHGCLSPLN 120
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
IGPE + + SL++R+ + E++ A + T+EG TA +I + L +V+ITRLA GI
Sbjct: 121 GIGPEQLTLDSLVKRVREHGVTEIVMATNPTLEGDGTALFISNLLADDNVRITRLARGIA 180
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
GS L++ + + +A+R R
Sbjct: 181 SGSVLEFANKEMLADALRGRQSF 203
>gi|46199538|ref|YP_005205.1| recombination protein recR [Thermus thermophilus HB27]
gi|73621525|sp|Q72I96|RECR_THET2 RecName: Full=Recombination protein recR
gi|46197164|gb|AAS81578.1| recombination protein recR [Thermus thermophilus HB27]
Length = 194
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 120/195 (61%), Gaps = 4/195 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L + L+R+PG GP++A+R LHL KE+ +V C CGN
Sbjct: 3 YPESLLKLTRALSRLPGIGPKTAQRLALHLAFHKEEAEAL--AEALEGLKRVRACRECGN 60
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D+ RD S++ VVE VADL+ALERS LYHVLGG+L+PL+ IGP+++
Sbjct: 61 LAEGELCPICQDEDRDRSLLAVVESVADLYALERSGEFRGLYHVLGGALNPLEGIGPKEL 120
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L R+ + + E++ A S T+EG+ TA Y+ ++LK V++TR AYG+P+G L+Y
Sbjct: 121 NLEGLFRRL--EGVEEVVLATSMTVEGEATALYLAEELKKRGVRVTRPAYGLPVGGSLEY 178
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 179 ADEVTLGRALEGRRP 193
>gi|254488517|ref|ZP_05101722.1| recombination protein RecR [Roseobacter sp. GAI101]
gi|214045386|gb|EEB86024.1| recombination protein RecR [Roseobacter sp. GAI101]
Length = 197
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 104/196 (53%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI +++R+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN
Sbjct: 3 STRDIDALIDLMSRLPGLGPRSARRAVLHLIRKRALLLTPLADVMQTVAATARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 VGTTDICDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R+ + I E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLIDRVSTENITEVILALNATIDGQTTAHYIADQLDGR-VQLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R +
Sbjct: 182 LDDGTITAAMRARKSI 197
>gi|55981569|ref|YP_144866.1| recombination protein RecR [Thermus thermophilus HB8]
gi|73621526|sp|Q5SHY0|RECR_THET8 RecName: Full=Recombination protein recR
gi|55772982|dbj|BAD71423.1| RecR protein [Thermus thermophilus HB8]
Length = 194
Score = 256 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 120/195 (61%), Gaps = 4/195 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L + L+R+PG GP++A+R LHL KE+ +V C CGN
Sbjct: 3 YPESLLKLTRALSRLPGIGPKTAQRLALHLAFHKEEAEAL--AEALEGIKRVRACRECGN 60
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D+ RD S++ VVE VADL+ALERS LYHVLGG+L+PL+ IGP+++
Sbjct: 61 LAEGELCPICQDEDRDRSLLAVVESVADLYALERSGEFRGLYHVLGGALNPLEGIGPKEL 120
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L R+ + + E++ A S T+EG+ TA Y+ ++LK V++TR AYG+P+G L+Y
Sbjct: 121 NLEGLFRRL--EGVEEVVLATSMTVEGEATALYLAEELKKRGVRVTRPAYGLPVGGSLEY 178
Query: 186 LDDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 179 ADEVTLGRALEGRRP 193
>gi|218294871|ref|ZP_03495725.1| recombination protein RecR [Thermus aquaticus Y51MC23]
gi|218244779|gb|EED11303.1| recombination protein RecR [Thermus aquaticus Y51MC23]
Length = 194
Score = 256 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 132/196 (67%), Gaps = 4/196 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L + L+R+PG GP++A++ L L K ++ L E +A + + + +C +CGN
Sbjct: 3 YPESLLKLARALSRLPGIGPKTAQKLALFLAFHK-EVAEELKEGLAALRD-LGVCRVCGN 60
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D+ RD +++ VVE VADL+ALERS + +YHVLGG+L+PL+ +GP+D+
Sbjct: 61 LAEGELCPICQDEGRDRALLAVVETVADLYALERSGEFSGVYHVLGGALNPLEGVGPKDL 120
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++SL R+ +++RE+I A S T+EG+ TA ++ ++LK VK TRLAYG+P+G L+Y
Sbjct: 121 NLESLWPRL--QEVREVILATSMTVEGEATALFLAEELKKRGVKATRLAYGLPVGGSLEY 178
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ R L
Sbjct: 179 VDEVTLGRALEGRKPL 194
>gi|254463454|ref|ZP_05076870.1| recombination protein RecR [Rhodobacterales bacterium HTCC2083]
gi|206680043|gb|EDZ44530.1| recombination protein RecR [Rhodobacteraceae bacterium HTCC2083]
Length = 197
Score = 256 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 138/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ K+I+ LI+++A++PG GPRSARRA LHL++K+ LL PLA+++ + C CGN
Sbjct: 3 STKDIDALIEMMAKLPGLGPRSARRAVLHLIRKRSLLLTPLADSLQTVAATARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V T D C IC +R ++ VVEDV+DLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 VGTADICDICESVKRANGILCVVEDVSDLWAMERSGVFKGRYHVLGGTLSALDAIGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I LI+R+ + I E+I A++ATI+GQTTAHYI D L+ V +T LA G+P+G ELDY
Sbjct: 123 RIPRLIDRVTSEHITEVILALNATIDGQTTAHYIADLLENR-VTLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+ +R +
Sbjct: 182 LDDGTITAAMNARKPI 197
>gi|329849469|ref|ZP_08264315.1| recombination protein RecR [Asticcacaulis biprosthecum C19]
gi|328841380|gb|EGF90950.1| recombination protein RecR [Asticcacaulis biprosthecum C19]
Length = 200
Score = 256 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 137/196 (69%), Gaps = 2/196 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE L+ +L+++PG GPRSARRA L L+K++EQLL PL AM + +KV C +CG
Sbjct: 5 AGPEIERLMALLSKLPGLGPRSARRAALALLKRREQLLIPLTVAMQDAADKVVTCGVCGA 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ T +PCA C D RD ++I VVE+ + LWA+ER A + YHVLGG LS LD + PED+
Sbjct: 65 LSTRNPCATCSDPARDTTMICVVEEDSALWAMERVGAFSGRYHVLGGLLSALDGVRPEDL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSEL 183
+ L+ R+ I E+I A+ AT+EGQTTAHYI D+LKG+ +T LA G+P+G +L
Sbjct: 125 RLDGLVARVREGGIHEIIMALPATVEGQTTAHYIADRLKGLQNQATVTYLARGVPVGGDL 184
Query: 184 DYLDDGTIFEAIRSRT 199
D+LDDGTI A+++R
Sbjct: 185 DWLDDGTIAHALKTRR 200
>gi|297569217|ref|YP_003690561.1| recombination protein RecR [Desulfurivibrio alkaliphilus AHT2]
gi|296925132|gb|ADH85942.1| recombination protein RecR [Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + LI R+PG G ++A R +HL+++ LA+++ ++ + +CS C
Sbjct: 2 NVIPPALARLIADFGRLPGVGRKTASRLAMHLLRRPAVEAQALAKSLTELHQLITMCSTC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
DPC IC + R+ ++ VVE+ ADL A+E++ + YH+L G LSP D IGP
Sbjct: 62 CAFSEADPCEICCNPDREQGLVCVVEEPADLVAIEKTASFKGKYHILHGVLSPADGIGPG 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSE 182
++ I L+ERI ++ E++ A S+T+ G+ TA Y++ L + V+ITRLA GIPMG +
Sbjct: 122 ELKIDRLLERIRRDQVNEVLIATSSTVPGEATAAYLIRHLQENSKVRITRLACGIPMGMD 181
Query: 183 LDYLDDGTIFEAIRSRTV 200
+ Y D+ T+ AI SR
Sbjct: 182 IKYADELTLSRAIASRQQ 199
>gi|304320340|ref|YP_003853983.1| recombination protein RecR [Parvularcula bermudensis HTCC2503]
gi|303299242|gb|ADM08841.1| recombination protein RecR [Parvularcula bermudensis HTCC2503]
Length = 202
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 102/201 (50%), Positives = 144/201 (71%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M G EIE L+ I++R+PGFGPRSARR LHL++++E ++ PLAEA+A V C
Sbjct: 1 MSTLPVGPEIEQLLTIISRLPGFGPRSARRIALHLLRRREGVMVPLAEALATAAATVAPC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN D+ PC +C D++RD SV+ VVEDV D+WALERS A YH+LGG +SPLD I
Sbjct: 61 EICGNWDSQSPCRLCEDEERDGSVLCVVEDVGDVWALERSGAFKGRYHILGGLISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+D+ L +R +RE+I A+SAT++GQTTA Y+ D+L+G+ + +TRL++G+P+G
Sbjct: 121 GPDDLNFGPLSQRASAGTVREVILALSATVDGQTTAGYVADRLEGLGLTVTRLSHGVPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL +LD+GT+ A++SR
Sbjct: 181 GELGHLDEGTLAAALQSRRDF 201
>gi|167752635|ref|ZP_02424762.1| hypothetical protein ALIPUT_00890 [Alistipes putredinis DSM 17216]
gi|167659704|gb|EDS03834.1| hypothetical protein ALIPUT_00890 [Alistipes putredinis DSM 17216]
Length = 198
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ ++++ L+++PG G R+A R +HL++ + + + ++ + C +C N+
Sbjct: 2 SRLLQDVTGELSKLPGIGRRTALRLAIHLLRMEPDSVSDMTRSIDRFRRDIKYCKLCNNL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D++RD + + VVE VAD+ ++E ++ LYHVLGG +SP+ I P D+
Sbjct: 62 SDEEICPICADRERDHTTVCVVEQVADVLSIENTRQYRGLYHVLGGVISPMQGIAPSDLK 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGSELDY 185
I LIERI IRE+I AIS ++EG+TT Y++++L+ VK+T +A GI G EL+Y
Sbjct: 122 IDLLIERIAQGTIREVILAISTSVEGETTLFYLLNRLRQYPQVKVTSIARGIGFGDELEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ TI A+ +R +
Sbjct: 182 VDELTITHALMNRREI 197
>gi|261365093|ref|ZP_05977976.1| recombination protein RecR [Neisseria mucosa ATCC 25996]
gi|288566519|gb|EFC88079.1| recombination protein RecR [Neisseria mucosa ATCC 25996]
Length = 206
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + + LI L +P GP+SA+R L++ K Q L EA+ ++ C
Sbjct: 1 MSK--SPDALTRLINALKVLPNVGPKSAQRMAHQLLQHKRQEAENLVEALQYALLQIQHC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C N +D C IC D RD +++V AD+ +E + + LY VL G +SP +
Sbjct: 59 RMCNNFCESDLCEICSDANRDPRRLMIVHMPADVSNMETANCHDGLYFVLMGQVSPAQGM 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L+ R++ ++ E+I A + T EG TA+ + + K + K++RLA GIP+G
Sbjct: 119 DISHISLDKLVARLQNSEVEEIIIATNFTAEGDATAYVLAELFKPLPYKVSRLARGIPLG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R +L
Sbjct: 179 GELEYVDAGTLAQAVYERRML 199
>gi|84685228|ref|ZP_01013127.1| recombination protein RecR [Maritimibacter alkaliphilus HTCC2654]
gi|84666960|gb|EAQ13431.1| recombination protein RecR [Rhodobacterales bacterium HTCC2654]
Length = 198
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/195 (51%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
++IENLI+++A++PG GPRSARRA LHL++K+ LL PLA+AM + C CGN
Sbjct: 4 APRDIENLIELMAKLPGLGPRSARRAVLHLIRKRGLLLAPLADAMHAVAVSARECITCGN 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TT+ C IC ++R + VVEDVADLWA+ER+ YHVLGG+LS LD IGP+++
Sbjct: 64 VGTTEVCDICTSEKRATGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIGPDEL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ + I E+I A++AT+ GQTTAHYI ++L+G +T LA G+P+G ELDY
Sbjct: 124 RIPKLVSRVGDENITEVILALNATVNGQTTAHYIAEELEGR-CDVTSLAQGVPIGGELDY 182
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI A+R+R
Sbjct: 183 LDDGTITAALRARKR 197
>gi|225850087|ref|YP_002730321.1| recombination protein RecR [Persephonella marina EX-H1]
gi|225646377|gb|ACO04563.1| recombination protein RecR [Persephonella marina EX-H1]
Length = 202
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 124/198 (62%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
I ++ ++ ++ +PG+G +SA+R ++L+ + + + ++ K+ CS C
Sbjct: 5 DIIPSTLKEAVEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSEC 64
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + C+IC ++RD SVI VVE+ D +A+E++ +YHV+GG LSPL+ I E
Sbjct: 65 GLYTEEEICSICSSEERDRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAE 124
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ I+ L+ER++ ++E+I A + T+EG+ TA YI + LK DV I+R+AYG+P G+ L
Sbjct: 125 DLNIEKLVERVDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVL 184
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ DD T+ +A+ +T++
Sbjct: 185 ENADDFTLSKALEHKTII 202
>gi|15639988|ref|NP_219441.1| recombination protein RecR [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189026227|ref|YP_001933999.1| recombination protein RecR [Treponema pallidum subsp. pallidum
SS14]
gi|6093950|sp|O83969|RECR_TREPA RecName: Full=Recombination protein recR
gi|3323328|gb|AAC65952.1| recombination protein (recR) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018802|gb|ACD71420.1| recombination protein RecR [Treponema pallidum subsp. pallidum
SS14]
gi|291060361|gb|ADD73096.1| recombination protein RecR [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 201
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 113/194 (58%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
IE +++ L+R+PG G + A R HL+K+ LA +A ++ +V C CG
Sbjct: 3 PAIEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGAFC 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
CA+C D RD +I VVE D+ + L+HVLGG ++PL+ +GP+ + I
Sbjct: 63 EGRTCALCTDASRDRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQLRI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L++R++ +RE+I A++ T+EG TTA Y+ L V +TRLA GIP+G +L+Y+D
Sbjct: 123 AALLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEYID 182
Query: 188 DGTIFEAIRSRTVL 201
T+ ++R R L
Sbjct: 183 RTTLAHSLRGRRPL 196
>gi|254994847|ref|ZP_05277037.1| recombination protein RecR [Anaplasma marginale str. Mississippi]
Length = 227
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/193 (46%), Positives = 131/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT
Sbjct: 2 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ +
Sbjct: 62 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+
Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLRAALSSRYVI 194
>gi|83941622|ref|ZP_00954084.1| recombination protein RecR [Sulfitobacter sp. EE-36]
gi|83847442|gb|EAP85317.1| recombination protein RecR [Sulfitobacter sp. EE-36]
Length = 197
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN
Sbjct: 3 STRDIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLTPLADMMQTVAATARECINCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V T D C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 VGTADICDICTSEKRANGEICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLMDRVRDEAVSEVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R +
Sbjct: 182 LDDGTITAAMRARKSI 197
>gi|302380904|ref|ZP_07269366.1| recombination protein RecR [Finegoldia magna ACS-171-V-Col3]
gi|302311282|gb|EFK93301.1| recombination protein RecR [Finegoldia magna ACS-171-V-Col3]
Length = 202
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 123/199 (61%), Gaps = 2/199 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K ++ LIK L+ +P G +SARR ++ + + L E++ N+ + + C CG
Sbjct: 3 LYPKAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKDNIRPCPNCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC DQ+RD S+I VVED ++ ++E++ N YHVLGG LSP D I P+D
Sbjct: 63 NLTDKKLCDICSDQKRDNSIITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSE 182
+ +++L R + ++E+I A+S T G T ++I++ LK +VK++R+A G+P+G+
Sbjct: 123 LNLENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGAN 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ ++++AI R +
Sbjct: 183 LEYYDEMSLYKAILDRREI 201
>gi|330813513|ref|YP_004357752.1| recombination protein RecR [Candidatus Pelagibacter sp. IMCC9063]
gi|327486608|gb|AEA81013.1| recombination protein RecR [Candidatus Pelagibacter sp. IMCC9063]
Length = 206
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/199 (44%), Positives = 141/199 (70%), Gaps = 3/199 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +++ LI +++++PG GP+S+RR L+L+K +E ++ PL++++ ++ K+ C++CGN
Sbjct: 5 TEPDLDELIALVSKLPGLGPKSSRRIALYLLKNRENVMKPLSKSLEKVHAKIIRCNLCGN 64
Query: 66 VDTTDP-CAI--CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
+ + + C I C ++ I VVE++AD+WA+E + YH+LGG+LS L P
Sbjct: 65 IKSKEVKCDIKKCSYSPKNYEQICVVENIADMWAMESTNVFQGHYHILGGTLSALGNSSP 124
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
ED+ I SL+ RI+ KI+E+I A SATIEGQTTAHYI D +K + VK+T+LA+G+P+G E
Sbjct: 125 EDLLINSLLNRIKENKIKEVILATSATIEGQTTAHYINDSIKDLGVKVTKLAHGLPVGGE 184
Query: 183 LDYLDDGTIFEAIRSRTVL 201
++YLDDGT+F A + R+ L
Sbjct: 185 IEYLDDGTLFSAFKFRSSL 203
>gi|83855099|ref|ZP_00948629.1| recombination protein RecR [Sulfitobacter sp. NAS-14.1]
gi|83842942|gb|EAP82109.1| recombination protein RecR [Sulfitobacter sp. NAS-14.1]
Length = 197
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ ++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN
Sbjct: 3 STRDIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLTPLADMMQTVAATARECINCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V T D C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++
Sbjct: 63 VGTADICDICTSEKRANGEICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLLDRVRDEAVSEVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R +
Sbjct: 182 LDDGTITAAMRARKSI 197
>gi|288800003|ref|ZP_06405462.1| recombination protein RecR [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333251|gb|EFC71730.1| recombination protein RecR [Prevotella sp. oral taxon 299 str.
F0039]
Length = 205
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 76/200 (38%), Positives = 127/200 (63%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61
++ +E + L+++PG G ++A R LHL+++ E + + ++ + ++ C+
Sbjct: 4 NQQYPSLLLEKAVGELSKLPGVGRKTALRLALHLLRQNESEVETFSSSILKMKQEIKHCN 63
Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
C NV T+ C IC D +RD++V+ VVE++ D+ A+E ++ N LYHVLGG +SP+D IG
Sbjct: 64 CCHNVSDTEICPICADARRDSTVVCVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGIG 123
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
P DI I SL+ER+ ++E+IFA+ +T+EG TT YI +L V +T +A GI +G+
Sbjct: 124 PADIEIDSLVERVSQGGVKEIIFALGSTMEGDTTNFYISKRLASYGVLLTVIARGISVGN 183
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
EL+Y D+ T+ +I +RT
Sbjct: 184 ELEYTDEVTLGRSILNRTPF 203
>gi|42520978|ref|NP_966893.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|59798344|sp|Q73FZ1|RECR_WOLPM RecName: Full=Recombination protein recR
gi|42410719|gb|AAS14827.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 201
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 136/191 (71%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ IGP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLDT 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+++R+ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G
Sbjct: 125 ILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSRTV 200
T+ A+ SR
Sbjct: 185 TLRIALTSRQE 195
>gi|157825725|ref|YP_001493445.1| recombination protein RecR [Rickettsia akari str. Hartford]
gi|157799683|gb|ABV74937.1| recombination protein RecR [Rickettsia akari str. Hartford]
Length = 207
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/199 (46%), Positives = 126/199 (63%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 8 NKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKI 67
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT C+IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 68 CGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNP 127
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G E
Sbjct: 128 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGE 187
Query: 183 LDYLDDGTIFEAIRSRTVL 201
LDYLD+GT+ AI R
Sbjct: 188 LDYLDEGTLSAAINLRQPF 206
>gi|146328633|ref|YP_001209842.1| recombination protein RecR [Dichelobacter nodosus VCS1703A]
gi|166221936|sp|A5EY33|RECR_DICNV RecName: Full=Recombination protein recR
gi|146232103|gb|ABQ13081.1| recombination protein RecR [Dichelobacter nodosus VCS1703A]
Length = 201
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 112/193 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L++ L + G G ++A+R L L+ KK LA+A+ V C C N
Sbjct: 3 FSPSFDALVQALTCLSGVGKKTAQRMALDLLLKKNAEAATLAKALTTALATVQRCRYCRN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C +C D R+ I VVE AD+ A+E++ L+ VL G ++PLD +GPE +
Sbjct: 63 LSDAEVCLLCADPLRNRQQICVVETPADVIAIEQATDYRGLFFVLMGHIAPLDGMGPEAL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
G+ L +R+ + I EL+ A +AT+EG+TTA+++ + ++ TRLAYG+P+GSEL Y
Sbjct: 123 GMDILDDRLANEAISELVLATNATLEGETTAYFLAELAAKHGIQATRLAYGVPLGSELSY 182
Query: 186 LDDGTIFEAIRSR 198
+D T+ A +SR
Sbjct: 183 IDKQTLHHAFQSR 195
>gi|167626338|ref|YP_001676838.1| recombination protein RecR [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189029363|sp|B0TY95|RECR_FRAP2 RecName: Full=Recombination protein recR
gi|167596339|gb|ABZ86337.1| recombination protein RecR [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 201
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 1/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C
Sbjct: 1 MNNQIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C ++ D C IC Q RD S + ++E + DL A+E + Y VL G +SPLD I
Sbjct: 61 KYCQSLTEKDVCDICGSQNRDESKLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP ++ + L + I ++I E+I AIS T+EG+TTAH+I + G D+KI+R+ +G+P G
Sbjct: 121 GPNELKLDILEQIIINREINEIILAISPTVEGETTAHFISQMI-GKDIKISRIGFGVPFG 179
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+YLD T+ A +RT +
Sbjct: 180 GELEYLDQQTLIHAFNARTNI 200
>gi|268608026|ref|ZP_06141756.1| recombination protein [Ruminococcus flavefaciens FD-1]
Length = 164
Score = 254 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 67/164 (40%), Positives = 100/164 (60%)
Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97
E + A+A+ + V C C N+ D C IC D +RD+SVI VVE D+ A
Sbjct: 1 MDEAAVEDFAKALLDAKKNVHCCQCCQNLTERDICPICADDERDSSVICVVETPKDVTAF 60
Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157
ER++ N +YHVL G LSP+D I P+ + I+ L+ RI + E+I A + T+EG TA
Sbjct: 61 ERTREYNGVYHVLHGLLSPMDGITPDKLRIKELLARIAKGGVSEVIMATNPTVEGDATAM 120
Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
YI LK + +K+TRLA+G+P+G L+Y D+ T+F+A+ +R +
Sbjct: 121 YIAGLLKPMGIKVTRLAFGLPVGGILEYADEVTLFKALENRNDM 164
>gi|172047911|sp|A8GNG2|RECR_RICAH RecName: Full=Recombination protein recR
Length = 201
Score = 254 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 92/199 (46%), Positives = 126/199 (63%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 2 NKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT C+IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 62 CGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G E
Sbjct: 122 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
LDYLD+GT+ AI R
Sbjct: 182 LDYLDEGTLSAAINLRQPF 200
>gi|149924603|ref|ZP_01912958.1| recombination protein RecR [Plesiocystis pacifica SIR-1]
gi|149814528|gb|EDM74113.1| recombination protein RecR [Plesiocystis pacifica SIR-1]
Length = 205
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAI 74
+LAR+PG G +SA R L +V+ + L++A+++++ + LCS+C ++ +T C I
Sbjct: 3 SLLARLPGIGEKSALRLALAIVRSNDDYCRALSQAISDVHQHMRLCSVCCDLTSTPVCEI 62
Query: 75 CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERI 134
C D +RDA +I VV D A ER+ YHVL G L PL +GP ++ + SL+ R+
Sbjct: 63 CSDPRRDAGLICVVSQPQDRMAFERAGVFRGRYHVLHGVLDPLAGVGPNELKVASLLARL 122
Query: 135 ---------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E +RE+I A S +EG TA Y+ L+ + V +TR+A G+ +
Sbjct: 123 QPKEGEPKEGEPKEREKSPVREVIVATSPNVEGDATALYLAKLLEPLGVSVTRIASGVAV 182
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G EL+Y D T+ A+ R +
Sbjct: 183 GGELEYADMTTLHRALEDRRSI 204
>gi|88658065|ref|YP_507639.1| recombination protein RecR [Ehrlichia chaffeensis str. Arkansas]
gi|123492997|sp|Q2GFZ4|RECR_EHRCR RecName: Full=Recombination protein recR
gi|88599522|gb|ABD44991.1| recombination protein RecR [Ehrlichia chaffeensis str. Arkansas]
Length = 195
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 132/193 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P FGP S+RR LHL++ KE+++ PLA + ++ + C +C N+D
Sbjct: 2 DINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNIDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + +
Sbjct: 62 KSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
S++ERI+ ++E+I I T++GQ T HYI +K + +K+TRLA GIPMG E+DYLD+
Sbjct: 122 SIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELGIKVTRLACGIPMGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR ++
Sbjct: 182 GTLSAALSSRYII 194
>gi|297170604|gb|ADI21630.1| recombinational DNA repair protein (recF pathway) [uncultured
myxobacterium HF0130_06F04]
Length = 207
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 84/205 (40%), Positives = 123/205 (60%), Gaps = 8/205 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQ--------LLGPLAEAMANIYNK 56
++ IE LI + R+PG G R+A R +L+K+ L LA A+ + ++
Sbjct: 1 MSADPIERLILEMGRLPGIGERTAARLAFYLLKQARDAEARGLSTLARDLALALTEVVDE 60
Query: 57 VCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116
V LCS C N+ +D C+IC D RD ++ VVE+V+DL ALE S A YHVL G+L+P
Sbjct: 61 VRLCSRCQNLCASDLCSICEDTTRDERLLCVVENVSDLRALEASGAYRGTYHVLHGALAP 120
Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176
LD +GP D+ + L +R+ +E+I A++A +EG TA Y+ L DVK++RLA G
Sbjct: 121 LDGVGPADLKLPELADRVVRGGYQEVILAMNADVEGDATALYLARLLGAGDVKLSRLASG 180
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+P+G EL+YLD TI A+ +RT
Sbjct: 181 VPLGGELEYLDQATIGRALTARTPF 205
>gi|255994276|ref|ZP_05427411.1| recombination protein RecR [Eubacterium saphenum ATCC 49989]
gi|255993944|gb|EEU04033.1| recombination protein RecR [Eubacterium saphenum ATCC 49989]
Length = 198
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 73/192 (38%), Positives = 113/192 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
ENLI L+R+PG G ++A+R + + ++ ++ A+ N + C CG +
Sbjct: 7 FENLITELSRLPGIGRKTAQRLAIFITDMEDNKALSISRAIEEAVNNLKPCDTCGCLTDN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
C C D R+ VI VVE+ D+ A+E+ K YHVLGG +SPLD IGP+ + I +
Sbjct: 67 GKCLFCSDPLRNDDVICVVENTIDIVAMEKLKNYRGRYHVLGGVISPLDGIGPDHLRIDT 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R+ ++E+I A S TIEG+ TA+YI +L+ + +K TR+A GIP+G + DY+D
Sbjct: 127 LLSRVVKYDVKEVILATSVTIEGEATANYIAKELEKLGIKATRIAKGIPVGGKFDYIDAM 186
Query: 190 TIFEAIRSRTVL 201
T+ AI R +
Sbjct: 187 TMQNAIDKREEM 198
>gi|320527139|ref|ZP_08028326.1| recombination protein RecR [Solobacterium moorei F0204]
gi|320132467|gb|EFW25010.1| recombination protein RecR [Solobacterium moorei F0204]
Length = 198
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K + LI+ L +PG G ++A R +++ Q A+A+ +++ K+ C ICG
Sbjct: 1 MYPKSLTELIERLKFLPGVGEKTAERYAFSIMEMNLQEAKEFAQAINDVHEKITHCRICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D R+ I VV+ D+ A+E++ YHVL G +S I P D
Sbjct: 61 NLSEKEECEICRDDSRNQKQIFVVQSPKDVIAMEKTAEYRGTYHVLNGLISSSKGIMPND 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182
+ I+SL+ R+ + E+I + TI+G+TTA Y+ + + V +TR+A+G+P G
Sbjct: 121 LNIESLLARLPEAE--EVILGTNITIDGETTAMYLDKLITSRYPHVLVTRIAHGLPSGGM 178
Query: 183 LDYLDDGTIFEAIRSRTVL 201
LDY D+ T+ A+ R +
Sbjct: 179 LDYADEMTLAHALADRRRM 197
>gi|73666876|ref|YP_302892.1| RecR protein [Ehrlichia canis str. Jake]
gi|123615050|sp|Q3YSL1|RECR_EHRCJ RecName: Full=Recombination protein recR
gi|72394017|gb|AAZ68294.1| RecR protein [Ehrlichia canis str. Jake]
Length = 195
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 134/193 (69%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P FGP S+RR LHL++ KE+++ PLA + ++ + CS+C N+D
Sbjct: 2 DINKLINMFAKLPNFGPSSSRRIVLHLLRNKEEVMLPLASGIQDLAFQTKECSVCFNIDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + +
Sbjct: 62 KSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLD 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++ERI+ I+E+I I T++GQ T HYI +KG+ +KITRLA GIPMG E+DYLD+
Sbjct: 122 NIVERIKKFDIKEVIIGIGNTMDGQVTTHYITQIVKGLGIKITRLACGIPMGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLSAALSSRYVI 194
>gi|297565807|ref|YP_003684779.1| recombination protein RecR [Meiothermus silvanus DSM 9946]
gi|296850256|gb|ADH63271.1| recombination protein RecR [Meiothermus silvanus DSM 9946]
Length = 205
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 123/201 (61%), Gaps = 9/201 (4%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L++ LA +PG GP++A++ L+LV +K+ A + + C ICGN
Sbjct: 3 YPERLLKLVRALAVLPGVGPKTAQKLGLYLVMQKDAAQEL--LAALDAAQALHPCPICGN 60
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D+ R+ +++ VVE V DL A+ERS + LYHVLGG+L+PL+ IGPE +
Sbjct: 61 LAEDELCPICADEHRERNLVCVVESVGDLMAIERSGEYSGLYHVLGGALNPLEGIGPEQL 120
Query: 126 GIQSLIERIEVK-------KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
+ S +R++ + K+ E+I A S T+EG+ TA Y+ D LK +K TRLAYG+P
Sbjct: 121 NLGSFYKRLQPENPEALGAKVEEIILATSMTVEGEATAAYLADMLKERGIKATRLAYGLP 180
Query: 179 MGSELDYLDDGTIFEAIRSRT 199
+G L+Y D+ T+ A+ +R
Sbjct: 181 VGGSLEYADEVTLARALENRR 201
>gi|110678387|ref|YP_681394.1| recombination protein RecR [Roseobacter denitrificans OCh 114]
gi|122973002|sp|Q16BD5|RECR_ROSDO RecName: Full=Recombination protein recR
gi|109454503|gb|ABG30708.1| recombination protein RecR [Roseobacter denitrificans OCh 114]
Length = 197
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 138/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ K+I+ LI ++A++PG GPRSARR LHL++K+ LL PLA+ + + C CGN
Sbjct: 3 STKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++
Sbjct: 63 VGTTDVCDICTCEKRANGELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ + I E+I A++ATI+GQTTAHYI D L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEG-QVRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 182 LDDGTITAAMRARKSF 197
>gi|99036083|ref|ZP_01315117.1| hypothetical protein Wendoof_01000036 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 197
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 135/191 (70%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ GP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGTGPKELNLDT 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+++R+ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G
Sbjct: 125 ILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSRTV 200
T+ A+ SR
Sbjct: 185 TLRIALTSRQE 195
>gi|91206053|ref|YP_538408.1| recombination protein RecR [Rickettsia bellii RML369-C]
gi|157826581|ref|YP_001495645.1| recombination protein RecR [Rickettsia bellii OSU 85-389]
gi|122425241|sp|Q1RH45|RECR_RICBR RecName: Full=Recombination protein recR
gi|172047817|sp|A8GUU1|RECR_RICB8 RecName: Full=Recombination protein recR
gi|91069597|gb|ABE05319.1| Recombination protein RecR [Rickettsia bellii RML369-C]
gi|157801885|gb|ABV78608.1| recombination protein RecR [Rickettsia bellii OSU 85-389]
Length = 200
Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C
Sbjct: 1 MNDN--NNEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKTLINNLTEIDKKIVKC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+CGN+DT + C IC + RD SVI +VE VA+LWA+ERS LYHVLG +LS R
Sbjct: 59 QVCGNMDTENICGICTSEYRDKSVIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQ 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P + + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G
Sbjct: 119 NPSILRLPELLDRCFKENIKEVIIATNSTLEGQTTAYFITEYLKDHPAKISRLASGIPIG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GT+ AI R
Sbjct: 179 GELDYLDEGTLSAAINLRQPF 199
>gi|162448235|ref|YP_001621367.1| recombination DNA repair protein [Acholeplasma laidlawii PG-8A]
gi|161986342|gb|ABX81991.1| recombination DNA repair protein [Acholeplasma laidlawii PG-8A]
Length = 195
Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 2/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI L ++PG G ++A R LHL + L + + + C ICG
Sbjct: 1 MYPTIILELIDDLKKLPGIGEKTAERLALHLTNWDSEDLKHFGTHLIELKTNISFCDICG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+IC D+ +D + I+VV D D++A+E++K + YHVL G + I P+D
Sbjct: 61 LLTDDHICSICKDETKDKTQIMVVSDSKDVFAIEKTKTFHGNYHVLNGLIDFSKGIEPKD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L R++ I+E+I A ++ +EG+ TA YI K +D+ I+RL YG+P+G++L
Sbjct: 121 LNFDKLTNRVKD--IKEIIIATNSNVEGELTAQYIKSLYKDLDLTISRLGYGLPVGADLK 178
Query: 185 YLDDGTIFEAIRSRTV 200
Y D T+ +A+ +R
Sbjct: 179 YADQLTLTKAVENRQK 194
>gi|88607618|ref|YP_505551.1| recombination protein RecR [Anaplasma phagocytophilum HZ]
gi|123494636|sp|Q2GJA0|RECR_ANAPZ RecName: Full=Recombination protein recR
gi|88598681|gb|ABD44151.1| recombination protein RecR [Anaplasma phagocytophilum HZ]
Length = 194
Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 128/193 (66%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + +++PG GP S+RR LHL++ + ++ PLA + + C IC N+D
Sbjct: 2 DISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
T PC+IC D +RD S++ +VE++ DLWA E+ + +YHVLGG LS L +GPED+ +
Sbjct: 62 TSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNMS 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
S+ ER+ + ++E+I A + ++GQ T HYI +K VK+TRLA GIP+G E+DYLD+
Sbjct: 122 SIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTGVKVTRLACGIPLGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR ++
Sbjct: 182 GTLRAALSSRYII 194
>gi|88608709|ref|YP_506765.1| recombination protein RecR [Neorickettsia sennetsu str. Miyayama]
gi|123491366|sp|Q2GCN1|RECR_NEOSM RecName: Full=Recombination protein recR
gi|88600878|gb|ABD46346.1| recombination protein RecR [Neorickettsia sennetsu str. Miyayama]
Length = 196
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 131/193 (67%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LIK+ +PG GP+SARR LHL+K +E L + M +Y + C +CGN++
Sbjct: 3 KKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGNLE 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ PC+IC +R + ++ VVE++ DLWA+E++ N YHVL G+LS +D I PE + I
Sbjct: 63 SESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETLQI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L R+ ++ELI A +AT+EGQTTA YI++ LKG VK++ LA+GIP+GSE+DYLD
Sbjct: 123 EKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGTQVKLSFLAHGIPVGSEMDYLD 182
Query: 188 DGTIFEAIRSRTV 200
+GT+ A +R
Sbjct: 183 EGTLGIAFANRRA 195
>gi|169824211|ref|YP_001691822.1| recombination protein [Finegoldia magna ATCC 29328]
gi|297587502|ref|ZP_06946146.1| recombination protein R [Finegoldia magna ATCC 53516]
gi|303234906|ref|ZP_07321531.1| recombination protein RecR [Finegoldia magna BVS033A4]
gi|226739005|sp|B0S0K8|RECR_FINM2 RecName: Full=Recombination protein recR
gi|167831016|dbj|BAG07932.1| recombination protein [Finegoldia magna ATCC 29328]
gi|297574191|gb|EFH92911.1| recombination protein R [Finegoldia magna ATCC 53516]
gi|302494024|gb|EFL53805.1| recombination protein RecR [Finegoldia magna BVS033A4]
Length = 202
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 123/199 (61%), Gaps = 2/199 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K ++ LIK L+ +P G +SARR ++ + + L E++ N+ + C+ CG
Sbjct: 3 LYPKAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKTNIRPCANCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ C IC DQ+RD SVI VVED ++ ++E++ N YHVLGG LSP D I P+D
Sbjct: 63 NLTDKKLCDICSDQKRDNSVITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQD 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSE 182
+ +++L R + ++E+I A+S T G T ++I++ LK +VK++R+A G+P+G+
Sbjct: 123 LNLENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGAN 182
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D+ ++++AI R +
Sbjct: 183 LEYYDEMSLYKAILDRREI 201
>gi|57238988|ref|YP_180124.1| recombination protein RecR [Ehrlichia ruminantium str. Welgevonden]
gi|58578924|ref|YP_197136.1| recombination protein RecR [Ehrlichia ruminantium str. Welgevonden]
gi|58616983|ref|YP_196182.1| recombination protein RecR [Ehrlichia ruminantium str. Gardel]
gi|57161067|emb|CAH57974.1| putative recombination protein RecR [Ehrlichia ruminantium str.
Welgevonden]
gi|58416595|emb|CAI27708.1| Recombination protein RecR [Ehrlichia ruminantium str. Gardel]
gi|58417550|emb|CAI26754.1| Recombination protein RecR [Ehrlichia ruminantium str. Welgevonden]
Length = 195
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 130/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P G S+RR L+L++ +E+++ PLA ++ + K CSIC N+D
Sbjct: 2 DINKLINMFAKLPNLGSSSSRRIVLYLLRNREEIMLPLASSIQELALKTKECSICFNIDV 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ +
Sbjct: 62 KSPCSICSDVKRDQKLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNFN 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
++I RI+ ++E+I IS T++GQ T HYI +K + VK+TRLA GIPMG E+DYLD+
Sbjct: 122 NIIARIQNSGVQEVIIGISNTMDGQVTTHYITQMIKKLGVKVTRLACGIPMGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLSAALSSRYVI 194
>gi|269123196|ref|YP_003305773.1| recombination protein RecR [Streptobacillus moniliformis DSM 12112]
gi|268314522|gb|ACZ00896.1| recombination protein RecR [Streptobacillus moniliformis DSM 12112]
Length = 195
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ L+ +L+ + G G ++A R L+ K E + L + + Y + CS+C N+
Sbjct: 2 KKIDELVLVLSNLKGIGKKNATRIAFDLLSKDEDDINYLLYTIKSAYENIKPCSVCHNLT 61
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C IC R+ +VI VVED D++A ++ + N LYHVLGG + PL+ IG +++ I
Sbjct: 62 DLGICDICSSTNRNKNVICVVEDTRDIYAFNKASSYNGLYHVLGGKIDPLNGIGIDELNI 121
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL+ RI + I E+I A++ +EG+TT Y+ L ++VK++R+A GIP+G ++Y D
Sbjct: 122 DSLLSRI-DENINEVILALNPDLEGETTILYLTKLLSNMNVKVSRIASGIPIGGNIEYSD 180
Query: 188 DGTIFEAIRSRTVL 201
T+ +++ R ++
Sbjct: 181 SATLIKSLEGRVII 194
>gi|58696821|ref|ZP_00372348.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698616|ref|ZP_00373512.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630849|ref|YP_002727640.1| recombination protein RecR [Wolbachia sp. wRi]
gi|58534861|gb|EAL58964.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536979|gb|EAL60136.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592830|gb|ACN95849.1| recombination protein RecR [Wolbachia sp. wRi]
Length = 201
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 136/191 (71%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ IGP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLDT 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+++++ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G
Sbjct: 125 ILKKVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184
Query: 190 TIFEAIRSRTV 200
T+ A+ SR
Sbjct: 185 TLRIALTSRQE 195
>gi|163737247|ref|ZP_02144665.1| recombination protein RecR [Phaeobacter gallaeciensis BS107]
gi|163740343|ref|ZP_02147737.1| recombination protein RecR [Phaeobacter gallaeciensis 2.10]
gi|161386201|gb|EDQ10576.1| recombination protein RecR [Phaeobacter gallaeciensis 2.10]
gi|161389851|gb|EDQ14202.1| recombination protein RecR [Phaeobacter gallaeciensis BS107]
Length = 199
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 105/201 (52%), Positives = 143/201 (71%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K T +IE+LI ++A++PG GPRSARRA LHL++K+ LL PLAE M+ + C
Sbjct: 1 MIKNSTT-DIEDLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLAETMSEVAATAREC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNV T D C IC D R + VVEDV+DLWA+ER+ YHVLGG+LS LD +
Sbjct: 60 LNCGNVGTGDLCTICEDMTRANGELCVVEDVSDLWAMERAAVFKGRYHVLGGTLSALDAV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I L++R++ +++ E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G
Sbjct: 120 GPEDLRIPRLVDRVQAEQVSEVILALNATIDGQTTAHYIADQLSG-QVRLTSLAQGVPIG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GTI A+R+R +
Sbjct: 179 GELDYLDEGTITAALRARKDI 199
>gi|329119116|ref|ZP_08247807.1| recombination protein R [Neisseria bacilliformis ATCC BAA-1200]
gi|327464747|gb|EGF11041.1| recombination protein R [Neisseria bacilliformis ATCC BAA-1200]
Length = 201
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 105/191 (54%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70
L L +P GP+SA+R HL++ LAEA+ + +V C+ C +
Sbjct: 9 SRLTDALKTLPNVGPKSAQRIAFHLLQHNRDGATELAEALQHALKQVRHCTRCNTFCEDE 68
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C +C D +RD +++V AD+ +E + + LY VL G ++P + E I ++ L
Sbjct: 69 ICPVCADPERDGRRLMIVHMPADVAGMEAAHCHDGLYFVLMGQINPAQGMDLEHIALEKL 128
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
I R+ ++ E+I A T EG TA+ + + LK + KI+RLA G+P+G+EL+Y+D GT
Sbjct: 129 IARLGGGEVEEIIIATGFTAEGDATAYVLAELLKTLPCKISRLARGMPLGAELEYIDAGT 188
Query: 191 IFEAIRSRTVL 201
+ +A+ R L
Sbjct: 189 LAQAVYERRQL 199
>gi|295691233|ref|YP_003594926.1| recombination protein RecR [Caulobacter segnis ATCC 21756]
gi|295433136|gb|ADG12308.1| recombination protein RecR [Caulobacter segnis ATCC 21756]
Length = 200
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 101/195 (51%), Positives = 137/195 (70%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G EIE LI +L+++PG GPRS RRA L L+KK++ LL PLA AMA KV CS CG+
Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLALAMAEAQAKVRTCSTCGS 64
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+D TDPCA+C D RD ++ VVE+V +WA+ER + YHVLGG LS LD +GPE +
Sbjct: 65 LDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHVLGGLLSALDGVGPEAL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+ ++ E+I A+ AT++GQTTAHYI D+L +V +T LA G+P+G +LD+
Sbjct: 125 RIGELVARVGGGEVAEVILALPATVDGQTTAHYIADRLAQTNVPVTMLARGVPVGGDLDW 184
Query: 186 LDDGTIFEAIRSRTV 200
LDDGTI +A+R+R
Sbjct: 185 LDDGTIAQALRARRP 199
>gi|84500403|ref|ZP_00998652.1| recombination protein RecR [Oceanicola batsensis HTCC2597]
gi|84391356|gb|EAQ03688.1| recombination protein RecR [Oceanicola batsensis HTCC2597]
Length = 197
Score = 252 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G +IE LI ++AR+PG GPRSARRA L +++KKE LL PLA+ M ++ V C+ CGN
Sbjct: 3 AGGDIEALIDMMARLPGLGPRSARRAVLQMIRKKELLLTPLADLMHHVAATVRECATCGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD +GPE++
Sbjct: 63 IGAGQICDICASEKRATGEICVVEDVADLWAMERSAVFGGRYHVLGGTLSALDAVGPEEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L++R+ +++ E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY
Sbjct: 123 RIPKLVQRVTDERVTEVILALNATVDGQTTAHYIADQLEGR-VRLTSLAQGVPIGGELDY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+R+R
Sbjct: 182 LDDGTITAALRARKAF 197
>gi|254797228|ref|YP_003082069.1| recombination protein RecR [Neorickettsia risticii str. Illinois]
gi|254590472|gb|ACT69834.1| recombination protein RecR [Neorickettsia risticii str. Illinois]
Length = 196
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 130/193 (67%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+I+ LI + +PG GP+SARR LHL+K KE L + M ++ + C +CGN++
Sbjct: 3 KKIKALINLAESLPGLGPKSARRIVLHLLKSKETTLMRFIDTMQVLFETIKHCELCGNLE 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ PC+IC +R + ++ VVE++ DLWA+E++ + YHVL G+LS ++ I PE + I
Sbjct: 63 SESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHSGRYHVLNGALSIVNGITPETLQI 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L R+ ++ELI A +AT+EGQTTA YI++ LKG VK++ LA+GIP+GSE+DYLD
Sbjct: 123 EKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGAQVKLSFLAHGIPVGSEMDYLD 182
Query: 188 DGTIFEAIRSRTV 200
+GT+ A +R
Sbjct: 183 EGTLGIAFANRRA 195
>gi|126739562|ref|ZP_01755254.1| recombination protein RecR [Roseobacter sp. SK209-2-6]
gi|126719208|gb|EBA15918.1| recombination protein RecR [Roseobacter sp. SK209-2-6]
Length = 199
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 143/201 (71%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +IENLI ++A++PG GPRSARRA LHL++K+ LL PLA+ M+ + C
Sbjct: 1 MSDNSIS-DIENLIGLMAKLPGMGPRSARRAVLHLIRKRGLLLTPLADCMSEVAATAREC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CGNV T+D C++C D+ R + VVE V+DLWA+ER+ YHVLGG+LS LD +
Sbjct: 60 LNCGNVGTSDICSLCNDEDRANGELCVVETVSDLWAMERAAVFKGRYHVLGGTLSALDAV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GPED+ I L++R+ + IRE+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G
Sbjct: 120 GPEDLHIPRLVDRVTSEGIREVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
ELDYLD+GTI A+R+R L
Sbjct: 179 GELDYLDEGTITAALRARKDL 199
>gi|296116790|ref|ZP_06835396.1| recombination protein RecR [Gluconacetobacter hansenii ATCC 23769]
gi|295976591|gb|EFG83363.1| recombination protein RecR [Gluconacetobacter hansenii ATCC 23769]
Length = 198
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/196 (46%), Positives = 130/196 (66%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE LI +L R+PGFGPRSARRA L ++++ + + PLA AM V CS CG
Sbjct: 2 MGGAEIERLITLLGRLPGFGPRSARRAALAMLRQPQTRMLPLAHAMEQAARAVRTCSSCG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC+IC D RD ++ VVE+V DLWALER+ +Y VLGG+LS LD +GP+D
Sbjct: 62 NLDTCDPCSICADPARDHGLVCVVENVGDLWALERACVHRGVYQVLGGTLSALDGVGPDD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + L R+E +RE+I A+ T++G TT H++ D L ++ I+R+ G+P+G LD
Sbjct: 122 LNVAPLYARLEAGGVREVILALGTTVDGATTMHWLHDSLLRFNIPISRVGQGVPVGGALD 181
Query: 185 YLDDGTIFEAIRSRTV 200
LDDGT+ A+ +R
Sbjct: 182 VLDDGTLAAALMARRP 197
>gi|84516009|ref|ZP_01003370.1| recombination protein RecR [Loktanella vestfoldensis SKA53]
gi|84510451|gb|EAQ06907.1| recombination protein RecR [Loktanella vestfoldensis SKA53]
Length = 197
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+++++LI ++A++PG GPRSARRA LH++KK+ +L PLA+A+ + + V C C N+
Sbjct: 6 EDLDHLIAMMAKLPGLGPRSARRAVLHMIKKRNLVLLPLADALQKVGSTVRECLNCANIC 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T+D C IC+ +R I VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ I
Sbjct: 66 TSDLCDICLSDKRATGQIAVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAVGPDELRI 125
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
LI+RI + + E+I A+ ATI+G TTAHYI D+L V +T LA G+P+G ELDYLD
Sbjct: 126 PKLIDRIAAENVTEVIIALGATIDGLTTAHYIADQL--PGVSVTSLAQGVPVGGELDYLD 183
Query: 188 DGTIFEAIRSRTVL 201
DGTI A+ +R L
Sbjct: 184 DGTITAALNARKAL 197
>gi|190571171|ref|YP_001975529.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357443|emb|CAQ54877.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 197
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 85/192 (44%), Positives = 135/192 (70%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C ICGN+DT
Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGNLDTK 64
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
PC+IC + +RD ++ VVE++ DLWA E+ + +YHVLGG LS ++ IGP+++ + +
Sbjct: 65 SPCSICTNPKRDTKLMCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDN 124
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
+ +R+ KI E+I AI+ T+EGQ TA YI++ LK +VKI+RLA GIP+G E+DYLD+G
Sbjct: 125 IPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDYLDEG 184
Query: 190 TIFEAIRSRTVL 201
T+ A+ SR +
Sbjct: 185 TLKIALTSRQDI 196
>gi|157964523|ref|YP_001499347.1| recombination protein RecR [Rickettsia massiliae MTU5]
gi|157844299|gb|ABV84800.1| Recombination protein RecR [Rickettsia massiliae MTU5]
Length = 203
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 9 NDIDQLIYLFSKLPGLGSRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNID 68
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 69 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 128
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 129 PELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 188
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 189 EGTVSAAINLRQPF 202
>gi|269792613|ref|YP_003317517.1| recombination protein RecR [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100248|gb|ACZ19235.1| recombination protein RecR [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 200
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 106/192 (55%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ L R+PG G + ARR ++ + + + L+ A+ V CS+CG +
Sbjct: 7 PSVDGLIEKLKRLPGVGEKGARRFAFFILGQPKDWVEDLSRAIREARWSVRPCSVCGGLA 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC D RD VI VVE D A+ER + N YHVLGG SPLD +
Sbjct: 67 EGDLCPICSDPARDREVICVVESQEDCVAMERHRIFNGRYHVLGGRYSPLDGEDIPSEAL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
SL +R+E ++E+I A++ ++EG+ TA + + L + VK++RL+ G+P+G + + D
Sbjct: 127 ASLRDRVERGGVQEVILALAPSVEGELTALAVKEALDDLPVKVSRLSSGLPVGGSIGFAD 186
Query: 188 DGTIFEAIRSRT 199
T+ A+ R
Sbjct: 187 SATLKLALEGRR 198
>gi|239947272|ref|ZP_04699025.1| recombination protein RecR [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921548|gb|EER21572.1| recombination protein RecR [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 201
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDIRLKSLINNLVEIDKKIVKCKICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENICHICSSEYRDKSIIAIVETVAELWAMERSGNFRGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 187 EGTLSAAINLRQPF 200
>gi|56416635|ref|YP_153709.1| recombination protein [Anaplasma marginale str. St. Maries]
gi|56387867|gb|AAV86454.1| recombination protein [Anaplasma marginale str. St. Maries]
Length = 213
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 89/193 (46%), Positives = 131/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT
Sbjct: 20 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 79
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ +
Sbjct: 80 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 139
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+
Sbjct: 140 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 199
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 200 GTLRAALSSRYVI 212
>gi|319638361|ref|ZP_07993123.1| recombination protein recR [Neisseria mucosa C102]
gi|317400110|gb|EFV80769.1| recombination protein recR [Neisseria mucosa C102]
Length = 201
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K LI L +P GP+SA+R L++ K + L +A+ +V C
Sbjct: 1 MSKN--PDAFVRLINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C D C IC D++RD S +++V AD+ ++E + + LY VL G +SP +
Sbjct: 59 RMCNTFCEGDLCEICADEKRDKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGM 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
+ + L+ R++ I E+I A + T EG TA+ + + K + K++RLA GIP+G
Sbjct: 119 DISSVALDKLVVRLQASDIEEIIIATNFTAEGDATAYILAELFKNLPYKVSRLARGIPLG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y+D GT+ +A+ R +
Sbjct: 179 GEMEYVDAGTLAQAVYDRRNI 199
>gi|303256852|ref|ZP_07342866.1| recombination protein RecR [Burkholderiales bacterium 1_1_47]
gi|330998901|ref|ZP_08322628.1| recombination protein RecR [Parasutterella excrementihominis YIT
11859]
gi|302860343|gb|EFL83420.1| recombination protein RecR [Burkholderiales bacterium 1_1_47]
gi|329576115|gb|EGG57634.1| recombination protein RecR [Parasutterella excrementihominis YIT
11859]
Length = 203
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 2/194 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
I LI L ++PG GPR+A+R L+ L EA+ V C+ C N+
Sbjct: 6 AIAELIDALKKLPGVGPRAAQRIAYQLLNGDRSDANRLGEALLKATKTVHRCARCNNLTD 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C+ C RD S++ +VE VADL +E+S + + Y +L G LSPL+ +GP +IG+
Sbjct: 66 GELCSYCSSHNRDDSLLCIVESVADLMVIEQSLSYHGRYFILMGRLSPLNGVGPHEIGLD 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDYL 186
L+ER +++E+I A S T EG+ TA + + L +K+TR+A G+P G+E++Y
Sbjct: 126 KLLERAGEPEVKEVIIATSFTAEGEATAFAVSELLSKHYPQLKLTRIARGVPAGAEIEYT 185
Query: 187 DDGTIFEAIRSRTV 200
D T+ +A+ +R V
Sbjct: 186 DVNTVAQAMLNRRV 199
>gi|172045676|sp|A8F1L4|RECR_RICM5 RecName: Full=Recombination protein recR
Length = 201
Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 125/194 (64%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGSRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNID 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 187 EGTVSAAINLRQPF 200
>gi|255002981|ref|ZP_05277945.1| recombination protein RecR [Anaplasma marginale str. Puerto Rico]
gi|255004107|ref|ZP_05278908.1| recombination protein RecR [Anaplasma marginale str. Virginia]
gi|269958950|ref|YP_003328739.1| recombination protein RecR [Anaplasma centrale str. Israel]
gi|172045888|sp|Q5PB75|RECR_ANAMM RecName: Full=Recombination protein recR
gi|269848781|gb|ACZ49425.1| recombination protein RecR [Anaplasma centrale str. Israel]
Length = 195
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 89/193 (46%), Positives = 131/193 (67%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT
Sbjct: 2 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 61
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ +
Sbjct: 62 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
+++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+
Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ SR V+
Sbjct: 182 GTLRAALSSRYVI 194
>gi|298368786|ref|ZP_06980104.1| recombination protein RecR [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282789|gb|EFI24276.1| recombination protein RecR [Neisseria sp. oral taxon 014 str.
F0314]
Length = 206
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M KK LI L +P GP+SA+R L++ K + L +A+ N V C
Sbjct: 6 MNKK--PDAFTRLINALKVLPNVGPKSAQRMAHQLLQHKREEAQELVDALQNALRLVHHC 63
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C + C IC D R+ +++V AD+ +E + + LY VL G +SP +
Sbjct: 64 KLCNTFCEEELCGICSDSDRNPHRLMIVHMPADVSNMEAANCHDGLYFVLMGQISPAQGM 123
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
+ + LIER++ + E+I A + T EG TA+ + + K + K++RLA GIP+G
Sbjct: 124 DLSAVALDKLIERLQNSETEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLG 183
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R +
Sbjct: 184 GELEYVDAGTLAQAVYERRSI 204
>gi|312880093|ref|ZP_07739893.1| recombination protein RecR [Aminomonas paucivorans DSM 12260]
gi|310783384|gb|EFQ23782.1| recombination protein RecR [Aminomonas paucivorans DSM 12260]
Length = 203
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 103/194 (53%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ LI+ PG G +SARR L+++ + LAE + + C ICG +
Sbjct: 5 PYLDQLIERFRAFPGVGEKSARRMAFFLLQQPTPWVESLAEILRGAREHIHPCPICGALT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
DPC +C D R + ++ VVE D ALE+S YHVLGG +SPL+ +
Sbjct: 65 DRDPCPLCSDPGRRSELLCVVETPEDCIALEQSGVFRGRYHVLGGRVSPLEGEQIPPERL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L +RI+ I E+I A++ +EG TA + + L G+ VK++RLA G+P+G + + D
Sbjct: 125 DALRQRIQDGGIGEVILAMNPRVEGDLTAFTVQESLAGLPVKLSRLACGLPVGGSIGFAD 184
Query: 188 DGTIFEAIRSRTVL 201
T+ A+ +R
Sbjct: 185 RVTLHVAMEARQPF 198
>gi|254480509|ref|ZP_05093756.1| recombination protein RecR [marine gamma proteobacterium HTCC2148]
gi|214039092|gb|EEB79752.1| recombination protein RecR [marine gamma proteobacterium HTCC2148]
Length = 172
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 104/170 (61%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
TLHL+++ + LA A+ + +K+ CS C N D C IC D +RD S I VVE
Sbjct: 1 MTLHLLERDREGASELAGALQSAVDKIDHCSRCRNFTELDVCEICADIKRDVSTICVVET 60
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150
AD+ A+E+S + +Y VL G LSP+D IGP +IG+ +R+ + I E+I A + T+
Sbjct: 61 PADVLAVEQSGSFRGIYFVLMGHLSPIDGIGPAEIGLDKFQQRVVDEGIEEVILATNPTV 120
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
EG+ TA+Y+ D L+ V ++R+A+G+P+G EL+Y+D T+ A R
Sbjct: 121 EGEATAYYLSDALQRQGVNVSRIAHGVPLGGELEYVDGSTLAHAFSGRRP 170
>gi|157803801|ref|YP_001492350.1| recombination protein RecR [Rickettsia canadensis str. McKiel]
gi|172045660|sp|A8EYY2|RECR_RICCK RecName: Full=Recombination protein recR
gi|157785064|gb|ABV73565.1| recombination protein RecR [Rickettsia canadensis str. McKiel]
Length = 199
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 90/194 (46%), Positives = 124/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + NI K+ C ICGN+D
Sbjct: 5 NDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLINIDKKIVKCEICGNMD 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD SVI +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 65 TENICRICSSEYRDKSVIAIVETVAELWAMERSGNFKGLYHVLGYNLSAASRKNPSMLRL 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 125 PELLTRCFAANIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 184
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 185 EGTLSAAINLRQPF 198
>gi|262277953|ref|ZP_06055746.1| recombination protein RecR [alpha proteobacterium HIMB114]
gi|262225056|gb|EEY75515.1| recombination protein RecR [alpha proteobacterium HIMB114]
Length = 205
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 95/203 (46%), Positives = 138/203 (67%), Gaps = 7/203 (3%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K T ++NLI +++R+PG GP+SARR LHL K KE L+ PLA+ + + K+ C IC
Sbjct: 2 KFTEPVLDNLISLISRLPGLGPKSARRIALHLFKNKENLMKPLADTLGIAHEKILRCKIC 61
Query: 64 GNVDTTDP-CAI--CI--DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
G + + D C I C D D + +VE++AD+WA+E + YH+LGG+LS L+
Sbjct: 62 GAIKSVDANCTISKCEYIDNSYDQ--LCIVENIADMWAMEATNIYKGHYHILGGTLSALN 119
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
PE + I SLI+R++ ++E+I A SATIEGQTTAHYI D LK +++KIT+LA+G+P
Sbjct: 120 GSDPESLLIGSLIDRVKKNNVKEVIIATSATIEGQTTAHYINDSLKNLNIKITKLAHGLP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+GSE++YLDDGT+F A + R +
Sbjct: 180 VGSEIEYLDDGTLFSAFKYRNSI 202
>gi|323342244|ref|ZP_08082476.1| recombination protein R [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463356|gb|EFY08550.1| recombination protein R [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 196
Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 116/196 (59%), Gaps = 2/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K++E LI+ +PG G ++A R L ++ ++ Q + ++ + N++ C +C
Sbjct: 1 MYPKKLEQLIESFMMLPGVGQKTAERYALSILDQQTQDVDKFSQDLTIARNEIQSCKVCH 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C IC D RD S+I VV + +++E+ + +YHVLGG +S I PE+
Sbjct: 61 NLSDEEICQICKDNTRDRSIICVVATAKEAFSIEKMNEYHGVYHVLGGLISTQKGILPEN 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SLI R+ + + E+I A++AT+EG+ T+ Y+ KL+ ++RLA+G+P+G LD
Sbjct: 121 LNILSLINRV-DENVTEVILALNATVEGEMTSLYLAKKLEDK-TDVSRLAFGLPIGGHLD 178
Query: 185 YLDDGTIFEAIRSRTV 200
Y DD T+ +A R+
Sbjct: 179 YADDMTLMKAFEGRSK 194
>gi|255067895|ref|ZP_05319750.1| recombination protein RecR [Neisseria sicca ATCC 29256]
gi|255047883|gb|EET43347.1| recombination protein RecR [Neisseria sicca ATCC 29256]
Length = 201
Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K LI L +P GP+SA+R L++ K + L +A+ +V C
Sbjct: 1 MSK--APDAFTRLINALKILPNVGPKSAQRMAHQLLQSKREQAQELVDALQYALKQVQHC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C C IC D+ RD +++V AD+ +E + + LY VL G +SP +
Sbjct: 59 RMCNTFCEGSLCDICSDESRDKHRLMIVHMPADVSNMETANCHDGLYFVLMGQISPAQGM 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L+ R++ + E+I A + T EG TA+ + + K + K++RLA GIP+G
Sbjct: 119 DVSAIALDKLVARLQNADVEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R +
Sbjct: 179 GELEYVDAGTLAQAVYERRAI 199
>gi|261415549|ref|YP_003249232.1| recombination protein RecR [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372005|gb|ACX74750.1| recombination protein RecR [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327932|gb|ADL27133.1| recombination protein RecR [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 198
Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ + +ENLI A +PG G ++ARR H++ +K+ + A+++ KV C C
Sbjct: 2 NVEPQSLENLISEFASLPGIGLKTARRLAYHMLSRKKGDVERFADSLMQAAEKVHPCPRC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
D C C + A I VVE +D+ ERS LY VLGG +SPLD IGPE
Sbjct: 62 HAFTDEDICPTCR-AREGAKSICVVEKNSDILPFERSSVHKGLYFVLGGVISPLDGIGPE 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ + L+ERI+ + I EL+ A+ ++ E +TA I L G++VK TRLA GIPMGS+L
Sbjct: 121 ALHLPQLVERIKAENIEELVLALGSSPEADSTALMIDRMLAGVNVKRTRLARGIPMGSDL 180
Query: 184 DYLDDGTIFEAIRSRTVL 201
+++D+ T+ A R L
Sbjct: 181 EFIDEVTMLRAFEGRVSL 198
>gi|307151592|ref|YP_003886976.1| recombination protein RecR [Cyanothece sp. PCC 7822]
gi|306981820|gb|ADN13701.1| recombination protein RecR [Cyanothece sp. PCC 7822]
Length = 185
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 73/185 (39%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
+ R+PG GP++A+R LH++K+ E+ + LA+A+ +V LC +C ++ C IC
Sbjct: 1 MQRLPGVGPKTAQRLALHILKRPEEEVNTLAKAIIEAKKQVGLCQVCFHLSAESVCEICR 60
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
+ R+ ++I VV D D+ ALE+++ YHVLGG +SP+D IGPE + I +L+ R+
Sbjct: 61 NPNRNNNIICVVADSRDVIALEKTREYGGKYHVLGGVISPMDGIGPEQLNISALVRRVSQ 120
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+K++E+I AIS ++EG+TT Y+ LK + +TR+A+G+PMG +L+Y D+ T+ A+
Sbjct: 121 QKVQEVILAISPSVEGETTTLYVGQLLKPFTL-VTRIAFGLPMGGDLEYADEVTLARALE 179
Query: 197 SRTVL 201
R L
Sbjct: 180 GRREL 184
>gi|126641730|ref|YP_001084714.1| recombination protein gap repair [Acinetobacter baumannii ATCC
17978]
Length = 172
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 71/168 (42%), Positives = 107/168 (63%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
LHL+ K + LA A+ + + CS+C ++ + C IC +RD ++ VVE
Sbjct: 1 MALHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEHEICDICASTERDDQLLCVVES 60
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150
AD+ A+E+S + YHVLGG LSPLD IGPE+IGI LI+R+ I E+I A +AT+
Sbjct: 61 PADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPYLIQRLSQGTIEEVILATNATV 120
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
EGQ TAHY+++ K + + +TR+A G+P G EL+Y+D T+ +A+ +R
Sbjct: 121 EGQATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVDSHTLSQAVHNR 168
>gi|73621511|sp|Q4ULQ0|RECR_RICFE RecName: Full=Recombination protein recR
Length = 201
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 126/199 (63%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 2 NKTNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCEI 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT + C IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 62 CGNMDTENICCICSSEYRDKSVIAVVETVAELWAMERSSNFKGLYHVLGHNLSAASRQNP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + L+ KI+RLA GIP+G E
Sbjct: 122 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLREHPAKISRLASGIPIGGE 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
LDYLD+GT+ AI R
Sbjct: 182 LDYLDEGTLSAAINLRQPF 200
>gi|67459064|ref|YP_246688.1| recombination protein RecR [Rickettsia felis URRWXCal2]
gi|67004597|gb|AAY61523.1| Recombination protein RecR [Rickettsia felis URRWXCal2]
Length = 207
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 126/199 (63%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C I
Sbjct: 8 NKTNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCEI 67
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CGN+DT + C IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R P
Sbjct: 68 CGNMDTENICCICSSEYRDKSVIAVVETVAELWAMERSSNFKGLYHVLGHNLSAASRQNP 127
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ + L++R + I+E+I A ++T+EGQTTA++I + L+ KI+RLA GIP+G E
Sbjct: 128 SILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLREHPAKISRLASGIPIGGE 187
Query: 183 LDYLDDGTIFEAIRSRTVL 201
LDYLD+GT+ AI R
Sbjct: 188 LDYLDEGTLSAAINLRQPF 206
>gi|225075251|ref|ZP_03718450.1| hypothetical protein NEIFLAOT_00254 [Neisseria flavescens
NRL30031/H210]
gi|241758800|ref|ZP_04756913.1| recombination protein RecR [Neisseria flavescens SK114]
gi|261380151|ref|ZP_05984724.1| recombination protein RecR [Neisseria subflava NJ9703]
gi|224953426|gb|EEG34635.1| hypothetical protein NEIFLAOT_00254 [Neisseria flavescens
NRL30031/H210]
gi|241321008|gb|EER57221.1| recombination protein RecR [Neisseria flavescens SK114]
gi|284796989|gb|EFC52336.1| recombination protein RecR [Neisseria subflava NJ9703]
Length = 201
Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K LI L +P GP+SA+R L++ K + L +A+ +V C
Sbjct: 1 MSKN--PDAFVRLINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C D C IC D++R+ S +++V AD+ ++E + + LY VL G +SP +
Sbjct: 59 RMCNTFCEGDLCEICADEKREKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGM 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
+ + L+ R++ I E+I A + T EG TA+ + + K + K++RLA GIP+G
Sbjct: 119 DISAVALDKLVARLQASDIEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLG 178
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
E++Y+D GT+ +A+ R +
Sbjct: 179 GEMEYVDAGTLAQAVYDRRNI 199
>gi|282899916|ref|ZP_06307877.1| RecR protein [Cylindrospermopsis raciborskii CS-505]
gi|281195186|gb|EFA70122.1| RecR protein [Cylindrospermopsis raciborskii CS-505]
Length = 171
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 66/171 (38%), Positives = 108/171 (63%), Gaps = 1/171 (0%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
L+++K+ E + LA+ + + +V LC +C ++ C IC + RD+ I VV D
Sbjct: 1 MALYILKRPESEIEALAQTLIDAKKQVGLCQVCYHLTAEPVCEICRNPHRDSQTICVVAD 60
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150
D+ ALE+++ YHVLGG +SP+D IGPE + +Q+L+ R+ +K +E+I AIS ++
Sbjct: 61 SRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTLQALVRRVSQQKPQEVIMAISPSV 120
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
EG+TT YI LK ++TR+A+G+PMG +L+Y D+ T+ +A+ R L
Sbjct: 121 EGETTTLYIAGLLKPF-TRVTRIAFGLPMGGDLEYADEITLAKALEGRREL 170
>gi|294101972|ref|YP_003553830.1| recombination protein RecR [Aminobacterium colombiense DSM 12261]
gi|293616952|gb|ADE57106.1| recombination protein RecR [Aminobacterium colombiense DSM 12261]
Length = 204
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 112/192 (58%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + L+ +L R+PG G +SARR ++++ LA A+ + ++C CS CGN+
Sbjct: 4 PEPLLQLVTLLKRLPGVGEKSARRMAFFIIQQPGSYPEELAIALHGLKERLCECSKCGNI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC+IC D R+ + VVE DL ++E++ N LYHVL G +SPLD
Sbjct: 64 TDVDPCSICTDPLRERQTLCVVETAEDLLSMEQAGIYNGLYHVLKGKISPLDGEDLPPSE 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L ERI +++E+I A + +EG T + + +L+ +DVKI+RLAYG+P+G +++
Sbjct: 124 YERLKERIINTRVKEVIIATNPRVEGDLTFYSLFSELEDLDVKISRLAYGLPVGGSIEFA 183
Query: 187 DDGTIFEAIRSR 198
D T+ A SR
Sbjct: 184 DRITLHAAFESR 195
>gi|157828483|ref|YP_001494725.1| recombination protein RecR [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933201|ref|YP_001649990.1| recombination protein RecR [Rickettsia rickettsii str. Iowa]
gi|166221960|sp|A8GS42|RECR_RICRS RecName: Full=Recombination protein recR
gi|189029369|sp|B0BXK8|RECR_RICRO RecName: Full=Recombination protein recR
gi|157800964|gb|ABV76217.1| recombination protein RecR [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908288|gb|ABY72584.1| recombination protein [Rickettsia rickettsii str. Iowa]
Length = 201
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 124/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 187 EGTVSAAINLRQPF 200
>gi|114778109|ref|ZP_01452996.1| recombination protein RecR [Mariprofundus ferrooxydans PV-1]
gi|114551527|gb|EAU54081.1| recombination protein RecR [Mariprofundus ferrooxydans PV-1]
Length = 204
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ ++++L+ +PG GP++A R L+L+ + LA+A+ ++ +V C +CG
Sbjct: 7 PAPLARVVEMLSSLPGVGPKTAMRMGLNLLTRPAGDAAALAQALECLHEQVGFCPVCGCF 66
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
C C D RDA+ + VVE D+ +ER YHVL G LSP+D +GPE +
Sbjct: 67 SEQGHCHFCDDPSRDAATLCVVEQPVDVLMMERGHGYRGSYHVLLGRLSPVDGVGPEQLR 126
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ SL +R++ I E+I A SAT++G+ TAHY+ ++ + V ++R++ G+P G EL+YL
Sbjct: 127 LASLDQRMKQG-INEIILATSATVDGEATAHYLANRYQHAGVSVSRISRGVPEGGELEYL 185
Query: 187 DDGTIFEAIRSRTV 200
D+ T+ A+ R
Sbjct: 186 DEHTLSRALDQRVS 199
>gi|294670722|ref|ZP_06735597.1| hypothetical protein NEIELOOT_02444 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307610|gb|EFE48853.1| hypothetical protein NEIELOOT_02444 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 201
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 109/193 (56%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
LI L +P GP+SA+R L++ + L EA+ + +V C++C +
Sbjct: 7 AFSRLIHALKILPNVGPKSAQRMAYQLLQYNREGAEELVEALQHALKQVRHCTLCNTLCE 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC + +RD +++V AD+ +E + + LY VL G +SPL + I ++
Sbjct: 67 NELCEICANPERDGKRLMIVHMPADVAGMEAAHCHDGLYFVLMGHISPLQDMDLGHIALE 126
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L+ R++ +I E+I A + T EG TA+ + + LK + K++RLA G+P+G+EL+Y+D
Sbjct: 127 QLVGRLQNSEIEEIIIATNFTAEGDATAYILAELLKNLPYKVSRLARGMPLGAELEYIDA 186
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R L
Sbjct: 187 GTLAQAVYDRKQL 199
>gi|289523017|ref|ZP_06439871.1| recombination protein RecR [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503560|gb|EFD24724.1| recombination protein RecR [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 205
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 116/195 (59%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
K +E+LI++ R PG G +SARR L L+++ + LAE +A + + CS CGN+
Sbjct: 4 AKALEDLIRLFERFPGIGEKSARRMVLFLLQQPKSFSESLAECIAKCNSLLHPCSRCGNI 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC+IC D RD S I +VE V DL +E++ N LY VLG SPLD
Sbjct: 64 TDEDPCSICCDPFRDKSTICIVESVEDLITIEQAGIYNGLYFVLGSLYSPLDDEEIAPQI 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
++ L++R+ ++++E+I A S +EG+ T + I ++ + V ++RL+YG+P+G + +
Sbjct: 124 LERLLKRVSEEEVKEVILAFSPKVEGELTMNLISKIMEPLPVTVSRLSYGLPVGGSVSFA 183
Query: 187 DDGTIFEAIRSRTVL 201
D T+ A+ +RT +
Sbjct: 184 DRTTLHAALEARTYI 198
>gi|46447358|ref|YP_008723.1| recombination protein RecR [Candidatus Protochlamydia amoebophila
UWE25]
gi|73621502|sp|Q6MAF1|RECR_PARUW RecName: Full=Recombination protein recR
gi|46400999|emb|CAF24448.1| probable recombination protein RecR [Candidatus Protochlamydia
amoebophila UWE25]
Length = 198
Score = 247 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 114/196 (58%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + LI IL + PG G +SA R HL+ + L L+E + N +K+ C CG
Sbjct: 3 YPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNCGC 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C C QRD+ +I V D++++E + LYHVLGG LSPL+ GPE +
Sbjct: 63 LTDEAACYFCDINQRDSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPEHL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L RI+ +I+E++ A+ +T+EG TA ++ +L D++I+RLA+G+PMGS LDY
Sbjct: 123 SISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSSLDY 182
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A+ R+
Sbjct: 183 VDGGTLARALAGRSRF 198
>gi|329572902|gb|EGG54523.1| recombination protein RecR [Enterococcus faecalis TX1467]
Length = 164
Score = 247 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 67/164 (40%), Positives = 107/164 (65%)
Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97
KE+ A+A+ ++ + CSICGN+ DPC IC D+ RD S+I+VVE+ D+ A+
Sbjct: 1 MKEEDANAFAKALISVKRDLHFCSICGNITEEDPCEICQDKNRDRSIILVVEEPKDVMAM 60
Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157
E+ + LYH L G LSP++ GPEDI I SLI+R+ +++E+I A +AT EG+ TA
Sbjct: 61 EKMREYQGLYHALHGVLSPMEGTGPEDINIASLIKRLHDDEVKEVIIATNATTEGEATAM 120
Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
Y+ +K + +TRLA+G+ +GS+++Y D+ T+ +A+ R +
Sbjct: 121 YLSRLIKPAGITVTRLAHGLSVGSDIEYADEITLLKAVEGRREI 164
>gi|34580476|ref|ZP_00141956.1| recombination protein RecR [Rickettsia sibirica 246]
gi|229586721|ref|YP_002845222.1| recombination protein RecR [Rickettsia africae ESF-5]
gi|259563704|sp|C3PNG9|RECR_RICAE RecName: Full=Recombination protein recR
gi|28261861|gb|EAA25365.1| recombination protein RecR [Rickettsia sibirica 246]
gi|228021771|gb|ACP53479.1| Recombination protein RecR [Rickettsia africae ESF-5]
Length = 201
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 124/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENMCRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 187 EGTVSAAINLRQPF 200
>gi|238650290|ref|YP_002916142.1| recombination protein RecR [Rickettsia peacockii str. Rustic]
gi|259563705|sp|C4K0J3|RECR_RICPU RecName: Full=Recombination protein recR
gi|238624388|gb|ACR47094.1| recombination protein RecR [Rickettsia peacockii str. Rustic]
Length = 201
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 123/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHV G +LS R P + +
Sbjct: 67 TENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVFGHNLSAASRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSRTVL 201
DGT+ AI R
Sbjct: 187 DGTVSAAINLRQPF 200
>gi|283768645|ref|ZP_06341557.1| recombination protein RecR [Bulleidia extructa W1219]
gi|283105037|gb|EFC06409.1| recombination protein RecR [Bulleidia extructa W1219]
Length = 200
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +LI+++ ++PG G ++A R L + +++ A A+ N+ NKV C ICGN
Sbjct: 3 YPDSLNHLIEMIRQLPGVGEKTAERYAFALYEMEKEEAIEFAHAIVNMKNKVKNCLICGN 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + CAIC +RD + I+VV+ D+ A+E + +YHVL G +S I PE++
Sbjct: 63 MSEEEQCAICSSSKRDHTKILVVQSPKDIIAIENMGEYDGVYHVLNGLISATKGILPENL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSEL 183
I+ LI+R K+ RE+I A SAT++G+TT+ Y+ L + ++ +TR+A+G+P G+ L
Sbjct: 123 KIKELIQR--AKEAREVILATSATLDGETTSLYLTKVLDQEYPNLLVTRIAHGLPSGAML 180
Query: 184 DYLDDGTIFEAIRSRTV 200
DY D+ T+ A+ R
Sbjct: 181 DYADEMTLSHALSERRK 197
>gi|254444294|ref|ZP_05057770.1| recombination protein RecR [Verrucomicrobiae bacterium DG1235]
gi|198258602|gb|EDY82910.1| recombination protein RecR [Verrucomicrobiae bacterium DG1235]
Length = 197
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
E L K L R+PG G RSA R ++L+ +K + L+EA+ V CS+CGNV
Sbjct: 3 PAFEALQKELKRLPGVGFRSAERMAIYLLLEKPEAAERLSEAILRARECVRSCSVCGNVC 62
Query: 68 TTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C+IC D +R+ S + VVE V+DL A+E+S A YHVL G LSP++ +GPE++
Sbjct: 63 EDELCSICADSRREESGSLCVVEHVSDLMAIEKSGAYRGRYHVLHGKLSPINGVGPENLN 122
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ L +RIE + + ELI A+ +EG+ T HY+ + ++ V+++R+ +G+P G+ + Y
Sbjct: 123 LDGLAKRIEEEGVGELILALPNDVEGEATCHYLTELVESDKVEVSRIGFGLPSGASVLYA 182
Query: 187 DDGTIFEAIRSRTV 200
D GT+ A+ +R
Sbjct: 183 DSGTLKSALDARKR 196
>gi|85703836|ref|ZP_01034939.1| recombination protein RecR [Roseovarius sp. 217]
gi|85671156|gb|EAQ26014.1| recombination protein RecR [Roseovarius sp. 217]
Length = 205
Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 103/196 (52%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ +EI+ LI ++AR+PG GPRSARRA LH+++K+ LL PLA M + + C+ CGN
Sbjct: 11 STREIDALIDMMARLPGLGPRSARRAVLHMIRKRALLLAPLARLMQIVADTARECATCGN 70
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TT+ C IC +R I VVEDVADLWA+ER +A YHVLGG+LS LD++GPE +
Sbjct: 71 IGTTEICDICASAKRANGQICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDQVGPEVL 130
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ R+E + I E+I A++AT++GQTTAHYI D+L G V +T LA G+P+G ELDY
Sbjct: 131 RIPDLVARVESEAITEVILALNATVDGQTTAHYIADQLDGK-VTLTSLAQGVPIGGELDY 189
Query: 186 LDDGTIFEAIRSRTVL 201
LDDGTI A+ +R L
Sbjct: 190 LDDGTISAALSARKRL 205
>gi|320451189|ref|YP_004203285.1| recombination protein RecR [Thermus scotoductus SA-01]
gi|320151358|gb|ADW22736.1| recombination protein RecR [Thermus scotoductus SA-01]
Length = 194
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 125/196 (63%), Gaps = 4/196 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ + L + L+R+PG GP++A++ +LHL +E+ E + +C +CGN
Sbjct: 3 YPESLLKLARALSRLPGIGPKTAQKLSLHLAFHREEAEEL--ERALAGLEALGVCRVCGN 60
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC D+ RD SVI VVE V+DL+ALERS + LYHVLGG+L+PL+ +GP ++
Sbjct: 61 LAEGELCPICQDETRDRSVIAVVETVSDLYALERSGEFHGLYHVLGGALNPLEGVGPREL 120
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++SL R+ + E++ A S T+EG+ TA ++ ++LK ++ +RLAYG+P+G L+Y
Sbjct: 121 NLESLWARLS--GVEEVVLATSMTVEGEATALFLAEELKRRGIRASRLAYGLPVGGSLEY 178
Query: 186 LDDGTIFEAIRSRTVL 201
+D+ T+ A+ R L
Sbjct: 179 VDEVTLGRALEGRKPL 194
>gi|15892532|ref|NP_360246.1| recombination protein RecR [Rickettsia conorii str. Malish 7]
gi|20139547|sp|Q92I11|RECR_RICCN RecName: Full=Recombination protein recR
gi|15619693|gb|AAL03147.1| recombination protein RecR [Rickettsia conorii str. Malish 7]
Length = 201
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 124/194 (63%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C ICGN+D
Sbjct: 7 NDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDIRLKSLINNLVEIDKKIVKCEICGNMD 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
T + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R P + +
Sbjct: 67 TENMCRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSATSRQNPSILRL 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD
Sbjct: 127 PELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLD 186
Query: 188 DGTIFEAIRSRTVL 201
+GT+ AI R
Sbjct: 187 EGTVSAAINLRQPF 200
>gi|149197777|ref|ZP_01874826.1| recombination protein RecR [Lentisphaera araneosa HTCC2155]
gi|149138998|gb|EDM27402.1| recombination protein RecR [Lentisphaera araneosa HTCC2155]
Length = 200
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K+ ++ + I+ +A +PG G + A + L L E L A + ++ + + C+ C
Sbjct: 2 KLYPEQFQQAIETIASLPGIGKKGAEKLALALYSWPESKLKHFASLIDSMQHDLHNCAQC 61
Query: 64 GNVDTTD-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
G D C IC D +R I VVE V+ L +E+S + LYHVL G LSP+ IGP
Sbjct: 62 GFFSQKDALCPICSDPKRLNHQICVVEQVSQLPVIEKSGSFKGLYHVLHGKLSPMSGIGP 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+DI I SL++R + + E+I A S IEGQ TA +I L + TR+A GIP+G++
Sbjct: 122 DDINIDSLLQRCKENHVSEVILATSTDIEGQATASFIAKLLNEHGINTTRIAQGIPIGAD 181
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+Y D +I AI SR L
Sbjct: 182 LNYADAASIAMAINSRREL 200
>gi|296840852|ref|ZP_06863600.2| recombination protein RecR [Neisseria polysaccharea ATCC 43768]
gi|296839800|gb|EFH23738.1| recombination protein RecR [Neisseria polysaccharea ATCC 43768]
Length = 206
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 104/201 (51%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL++ K + L +A+ +V C
Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|194098674|ref|YP_002001736.1| recombination protein RecR [Neisseria gonorrhoeae NCCP11945]
gi|240014108|ref|ZP_04721021.1| recombination protein RecR [Neisseria gonorrhoeae DGI18]
gi|240112968|ref|ZP_04727458.1| recombination protein RecR [Neisseria gonorrhoeae MS11]
gi|240121670|ref|ZP_04734632.1| recombination protein RecR [Neisseria gonorrhoeae PID24-1]
gi|240123572|ref|ZP_04736528.1| recombination protein RecR [Neisseria gonorrhoeae PID332]
gi|240128276|ref|ZP_04740937.1| recombination protein RecR [Neisseria gonorrhoeae SK-93-1035]
gi|238690202|sp|B4RLV1|RECR_NEIG2 RecName: Full=Recombination protein recR
gi|193933964|gb|ACF29788.1| putative recombination protein [Neisseria gonorrhoeae NCCP11945]
gi|317164276|gb|ADV07817.1| recombination protein RecR [Neisseria gonorrhoeae TCDC-NG08107]
Length = 206
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 106/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL+++K + L +A+ +V C
Sbjct: 1 MMNSKKQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVRHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|218960784|ref|YP_001740559.1| recombination protein RecR [Candidatus Cloacamonas acidaminovorans]
gi|167729441|emb|CAO80352.1| recombination protein RecR [Candidatus Cloacamonas acidaminovorans]
Length = 199
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 102/194 (52%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +E LI+ R PG G ++A+R +LV + + LAE + CS C
Sbjct: 2 LFSENLEKLIQSFNRFPGIGRKTAQRLAWYLVAQDKNFALNLAETIKTTVESFKTCSQCN 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ +DPC CI R S + VVE+ +D+ LE Y VLG LSPLD GPE
Sbjct: 62 MLSESDPCPFCISPDRSDSYLCVVENSSDIQILEGMNEFKGRYFVLGHLLSPLDGYGPEQ 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I L+ERIE E+I A+ + EG+ T HY+ + LK + ITRL+ GIP G +L+
Sbjct: 122 INTAMLLERIENLHPSEVILALKPSAEGEATIHYLWELLKDKGISITRLSTGIPFGGDLE 181
Query: 185 YLDDGTIFEAIRSR 198
Y + T+ A + R
Sbjct: 182 YSNLNTLANAWKRR 195
>gi|239998982|ref|ZP_04718906.1| recombination protein RecR [Neisseria gonorrhoeae 35/02]
gi|240016543|ref|ZP_04723083.1| recombination protein RecR [Neisseria gonorrhoeae FA6140]
gi|240080667|ref|ZP_04725210.1| recombination protein RecR [Neisseria gonorrhoeae FA19]
gi|240115722|ref|ZP_04729784.1| recombination protein RecR [Neisseria gonorrhoeae PID18]
gi|240118018|ref|ZP_04732080.1| recombination protein RecR [Neisseria gonorrhoeae PID1]
gi|240125754|ref|ZP_04738640.1| recombination protein RecR [Neisseria gonorrhoeae SK-92-679]
gi|254493774|ref|ZP_05106945.1| recombination protein recR [Neisseria gonorrhoeae 1291]
gi|260440466|ref|ZP_05794282.1| recombination protein RecR [Neisseria gonorrhoeae DGI2]
gi|268594830|ref|ZP_06128997.1| recombination protein recR [Neisseria gonorrhoeae 35/02]
gi|268596789|ref|ZP_06130956.1| recombination protein recR [Neisseria gonorrhoeae FA19]
gi|268599049|ref|ZP_06133216.1| recombination protein recR [Neisseria gonorrhoeae MS11]
gi|268601402|ref|ZP_06135569.1| recombination protein recR [Neisseria gonorrhoeae PID18]
gi|268603731|ref|ZP_06137898.1| recombination protein recR [Neisseria gonorrhoeae PID1]
gi|268682202|ref|ZP_06149064.1| recombination protein recR [Neisseria gonorrhoeae PID332]
gi|268684353|ref|ZP_06151215.1| recombination protein recR [Neisseria gonorrhoeae SK-92-679]
gi|268686674|ref|ZP_06153536.1| recombination protein recR [Neisseria gonorrhoeae SK-93-1035]
gi|291043766|ref|ZP_06569482.1| recombination protein recR [Neisseria gonorrhoeae DGI2]
gi|226512814|gb|EEH62159.1| recombination protein recR [Neisseria gonorrhoeae 1291]
gi|268548219|gb|EEZ43637.1| recombination protein recR [Neisseria gonorrhoeae 35/02]
gi|268550577|gb|EEZ45596.1| recombination protein recR [Neisseria gonorrhoeae FA19]
gi|268583180|gb|EEZ47856.1| recombination protein recR [Neisseria gonorrhoeae MS11]
gi|268585533|gb|EEZ50209.1| recombination protein recR [Neisseria gonorrhoeae PID18]
gi|268587862|gb|EEZ52538.1| recombination protein recR [Neisseria gonorrhoeae PID1]
gi|268622486|gb|EEZ54886.1| recombination protein recR [Neisseria gonorrhoeae PID332]
gi|268624637|gb|EEZ57037.1| recombination protein recR [Neisseria gonorrhoeae SK-92-679]
gi|268626958|gb|EEZ59358.1| recombination protein recR [Neisseria gonorrhoeae SK-93-1035]
gi|291012229|gb|EFE04218.1| recombination protein recR [Neisseria gonorrhoeae DGI2]
Length = 205
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 105/193 (54%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL+++K + L +A+ +V C+ C
Sbjct: 8 AFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVRHCARCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|59801182|ref|YP_207894.1| putative recombination protein [Neisseria gonorrhoeae FA 1090]
gi|293399049|ref|ZP_06643214.1| recombination protein RecR [Neisseria gonorrhoeae F62]
gi|73621500|sp|Q5F8K5|RECR_NEIG1 RecName: Full=Recombination protein recR
gi|59718077|gb|AAW89482.1| putative recombination protein [Neisseria gonorrhoeae FA 1090]
gi|291610463|gb|EFF39573.1| recombination protein RecR [Neisseria gonorrhoeae F62]
Length = 205
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 106/193 (54%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL+++K + L +A+ +VC C+ C
Sbjct: 8 AFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVCHCARCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|308389330|gb|ADO31650.1| putative recombination protein [Neisseria meningitidis alpha710]
Length = 206
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 105/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL++ K + L +A+ +V C
Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEVANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|114326923|ref|YP_744080.1| recombination protein RecR [Granulibacter bethesdensis CGDNIH1]
gi|122328092|sp|Q0BVJ5|RECR_GRABC RecName: Full=Recombination protein recR
gi|114315097|gb|ABI61157.1| recombination protein recR [Granulibacter bethesdensis CGDNIH1]
Length = 202
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 93/192 (48%), Positives = 128/192 (66%), Gaps = 5/192 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G E+E LI +LAR+PG GPRSARRA L L+++ E L PLA AM N V C +CG
Sbjct: 1 MGGPELEQLIALLARLPGLGPRSARRAALRLLQQPETRLLPLAAAMQNAARAVKTCRVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+D+ DPC++C D R+ +I VVE V DLWA++R+ LYHVLGG LS L GP+
Sbjct: 61 NLDSADPCSVCTDPSRENGLICVVESVGDLWAMDRAGIYRGLYHVLGGVLSALAGTGPDA 120
Query: 125 IGIQSLIERIE-----VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+ +L+ RIE + E+I A+ AT++G TTAH++ ++L+ + V +TRLA GIP+
Sbjct: 121 LNWPALMRRIESSRPSATPVTEVILALGATVDGATTAHWLAEQLRPMGVSVTRLAQGIPI 180
Query: 180 GSELDYLDDGTI 191
G LD LDDGT+
Sbjct: 181 GGALDVLDDGTL 192
>gi|161870080|ref|YP_001599250.1| recombination protein RecR [Neisseria meningitidis 053442]
gi|226739006|sp|A9LZB7|RECR_NEIM0 RecName: Full=Recombination protein recR
gi|161595633|gb|ABX73293.1| recombination protein [Neisseria meningitidis 053442]
Length = 205
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 104/193 (53%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 8 AFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCAMCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|296120962|ref|YP_003628740.1| recombination protein RecR [Planctomyces limnophilus DSM 3776]
gi|296013302|gb|ADG66541.1| recombination protein RecR [Planctomyces limnophilus DSM 3776]
Length = 207
Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
G+ + L++ LA +PG G +SA R HL+ E+ LA A+ ++ + CS+C N
Sbjct: 12 YGRHVGLLVQQLAALPGIGQKSAERLAQHLLDCSEEEAAALAHAILDVRRTIRRCSVCHN 71
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C IC+D +RD ++ +VE DL ALE + +YHVLGG ++PL +GP+D+
Sbjct: 72 LTEQETCDICLDSRRDQGLVCIVEQPRDLLALEATGTFGGVYHVLGGRIAPLSGVGPDDL 131
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ +LI R++ KIREL+ A + T+EG TA YI++ L VKITRLA GI GS L++
Sbjct: 132 NLATLIRRVKAGKIRELVMATNPTLEGDGTALYIVNLLADEPVKITRLARGIATGSVLEF 191
Query: 186 LDDGTIFEAIRSRTVL 201
+ + +A++ R
Sbjct: 192 ANREMLSDALKGRQSF 207
>gi|325136277|gb|EGC58885.1| recombination protein RecR [Neisseria meningitidis M0579]
gi|325202069|gb|ADY97523.1| recombination protein RecR [Neisseria meningitidis M01-240149]
gi|325208177|gb|ADZ03629.1| recombination protein RecR [Neisseria meningitidis NZ-05/33]
Length = 205
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 104/193 (53%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 8 AFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCAMCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNMEVANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|15677109|ref|NP_274261.1| recombination protein RecR [Neisseria meningitidis MC58]
gi|121634930|ref|YP_975175.1| putative recombination protein [Neisseria meningitidis FAM18]
gi|254805017|ref|YP_003083238.1| recombination protein RecR [Neisseria meningitidis alpha14]
gi|20139759|sp|Q9JZ92|RECR_NEIMB RecName: Full=Recombination protein recR
gi|166221948|sp|A1KU46|RECR_NEIMF RecName: Full=Recombination protein recR
gi|7226477|gb|AAF41618.1| recombination protein RecR [Neisseria meningitidis MC58]
gi|120866636|emb|CAM10387.1| putative recombination protein [Neisseria meningitidis FAM18]
gi|254668559|emb|CBA06030.1| recombination protein RecR [Neisseria meningitidis alpha14]
gi|254670087|emb|CBA04989.1| recombination protein RecR [Neisseria meningitidis alpha153]
gi|325140533|gb|EGC63054.1| recombination protein RecR [Neisseria meningitidis CU385]
gi|325144619|gb|EGC66918.1| recombination protein RecR [Neisseria meningitidis M01-240013]
Length = 206
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 105/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL++ K + L +A+ +V C
Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|269214881|ref|ZP_05987334.2| recombination protein RecR [Neisseria lactamica ATCC 23970]
gi|269208788|gb|EEZ75243.1| recombination protein RecR [Neisseria lactamica ATCC 23970]
gi|319410486|emb|CBY90847.1| recombination protein RecR [Neisseria meningitidis WUE 2594]
Length = 206
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 104/201 (51%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL++ K + L +A+ +V C
Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|187918328|ref|YP_001883891.1| recombination protein RecR [Borrelia hermsii DAH]
gi|119861176|gb|AAX16971.1| recombination protein RecR [Borrelia hermsii DAH]
Length = 194
Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 105/189 (55%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI +++++PG G ++A R ++ K E+ L + ++N+++ + C C N
Sbjct: 3 IQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAEE 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+D R+ +VI VVE DL +E + + Y VL G L PL IGP + +
Sbjct: 63 EFCDICMDLSRNKNVICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNLDK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + + +E+I A +IEG TA+YI LK +D+ +TR+A G+P+G + D
Sbjct: 123 LEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNADKM 182
Query: 190 TIFEAIRSR 198
T A+R R
Sbjct: 183 TTLRALRLR 191
>gi|254671965|emb|CBA04385.1| recombination protein RecR [Neisseria meningitidis alpha275]
Length = 206
Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 105/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL++ K + L +A+ +V C
Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|28895691|ref|NP_802041.1| recombination protein [Streptococcus pyogenes SSI-1]
gi|28810940|dbj|BAC63874.1| putative recombination protein [Streptococcus pyogenes SSI-1]
Length = 164
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 66/164 (40%), Positives = 104/164 (63%)
Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97
+ + A+ + ++ CSICGN+ DPC IC D RD + I+VVED D+ A+
Sbjct: 1 MSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAM 60
Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157
E+ + + YHVL G +SP++ +GP+DI ++SLI R+ K+ E+I A +AT +G+ T+
Sbjct: 61 EKIQEYHGYYHVLHGLISPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSM 120
Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
YI LK +K+TRLA G+ +GS+++Y D+ T+ AI +RT L
Sbjct: 121 YISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL 164
>gi|15604303|ref|NP_220819.1| recombination protein RecR [Rickettsia prowazekii str. Madrid E]
gi|3860995|emb|CAA14895.1| RECOMBINATION PROTEIN RECR (recR) [Rickettsia prowazekii]
Length = 226
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 89/200 (44%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C
Sbjct: 28 MNK---TNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKC 84
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+DT C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R
Sbjct: 85 EICGNLDTKSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQ 144
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P + + L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G
Sbjct: 145 NPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIG 204
Query: 181 SELDYLDDGTIFEAIRSRTV 200
ELDYLD+GT+ AI R
Sbjct: 205 GELDYLDEGTLSAAISLRQP 224
>gi|160946874|ref|ZP_02094077.1| hypothetical protein PEPMIC_00835 [Parvimonas micra ATCC 33270]
gi|158447258|gb|EDP24253.1| hypothetical protein PEPMIC_00835 [Parvimonas micra ATCC 33270]
Length = 202
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K I+ +I L+++P G +SA + L +++ + A+++ N+ C
Sbjct: 1 MNN--YTKSIDEVIHYLSKLPSIGRKSATKMALKILEMDDDFTIEFAKSLINMKKNTHHC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+ + C IC D++RD S+I VVED+ + +LE++K YH+L G ++P + I
Sbjct: 59 KICGNLTEDEICNICADEKRDKSIITVVEDMQGVISLEKTKVYKGTYHILNGLVTPREGI 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
+D+ + SL+ERIE ++E+IFAIS TI+G+ T YI+D LK D+KI+++A GIP+
Sbjct: 119 TLDDLNVDSLLERIEKDNVKEVIFAISQTIDGELTELYIVDLLKNFKDLKISKIANGIPV 178
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G +D D+ T +A+ R +
Sbjct: 179 GRSIDSYDELTFLKALEDRREI 200
>gi|262393660|ref|YP_003285514.1| recombination protein RecR [Vibrio sp. Ex25]
gi|262337254|gb|ACY51049.1| recombination protein RecR [Vibrio sp. Ex25]
Length = 172
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR-DASVIIVVE 89
HL+++ + LA+A++ ++ C+ C + C IC + +R + I VVE
Sbjct: 1 MAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRTFTEEEVCHICTNPKRQENGQICVVE 60
Query: 90 DVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149
AD+ A+E + + Y VL G LSPLD IGP DIG+ L R+ I E+I A + T
Sbjct: 61 SPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDIAEVILATNPT 120
Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+EG+ TAHYI + K V +R+A+G+P+G EL+ +D T+ ++ R +
Sbjct: 121 VEGEATAHYIAELCKEHQVDASRIAHGVPVGGELELVDGTTLSHSLLGRHRI 172
>gi|313205704|ref|YP_004044881.1| recombination protein recr [Riemerella anatipestifer DSM 15868]
gi|312445020|gb|ADQ81375.1| recombination protein RecR [Riemerella anatipestifer DSM 15868]
gi|315022900|gb|EFT35924.1| recombination protein RecR [Riemerella anatipestifer RA-YM]
gi|325336853|gb|ADZ13127.1| Recombinational DNA repair protein (RecF pathway) [Riemerella
anatipestifer RA-GD]
Length = 202
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 119/195 (61%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K +E ++ ++ +PG G +SA R LHL+++ L +A+ N+ ++ C C
Sbjct: 2 NFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N TD C IC D R A ++ VVEDV D+ A+E + Y VLGG +SP++ IGP+
Sbjct: 62 HNFSDTDICEICADDSRHAELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGPQ 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I++L ++E+ +I E+IFA+SAT+EG TT +Y+ K K D+K + +A GI +G EL
Sbjct: 122 QLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKKFKHFDIKFSNIARGISVGDEL 181
Query: 184 DYLDDGTIFEAIRSR 198
+Y D+ ++ +I +R
Sbjct: 182 EYADEVSLGRSILNR 196
>gi|320104517|ref|YP_004180108.1| DNA replication and repair protein RecR [Isosphaera pallida ATCC
43644]
gi|319751799|gb|ADV63559.1| DNA replication and repair protein RecR [Isosphaera pallida ATCC
43644]
Length = 203
Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 2/194 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV--D 67
+E LI L R+PG G ++A R H++K + LAEA+ +V C IC N+
Sbjct: 8 VEKLIAELGRLPGVGAKTAERLAHHILKVPAEEALALAEAIRQAKQRVGYCPICHNLVES 67
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ CAIC D +RD +I VVE DL ALE + +YHVL G L+PL I E + +
Sbjct: 68 DHELCAICRDPRRDHGIICVVEQCRDLMALESAGTYQGVYHVLHGRLAPLQGISAEHLTL 127
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+SL R+ +RE+I A + +EG TA +I L G+ V IT+LA G+ GS L++ +
Sbjct: 128 ESLERRMRSGTVREVILATNPNLEGDGTALWISQHLGGLGVPITKLARGLASGSTLEFAN 187
Query: 188 DGTIFEAIRSRTVL 201
+ +A+ R
Sbjct: 188 KEMLVDALNGRQAF 201
>gi|51473627|ref|YP_067384.1| recombination protein RecR [Rickettsia typhi str. Wilmington]
gi|73621512|sp|Q68WU0|RECR_RICTY RecName: Full=Recombination protein recR
gi|51459939|gb|AAU03902.1| recombination protein RecR [Rickettsia typhi str. Wilmington]
Length = 199
Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 89/200 (44%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C
Sbjct: 1 MNK---TNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+DT + C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R
Sbjct: 58 EICGNMDTKNICHICSSEHRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQ 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P + + L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G
Sbjct: 118 NPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIG 177
Query: 181 SELDYLDDGTIFEAIRSRTV 200
ELDYLD+GT+ AI R
Sbjct: 178 GELDYLDEGTLSAAINLRQP 197
>gi|288574938|ref|ZP_06393295.1| recombination protein RecR [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570679|gb|EFC92236.1| recombination protein RecR [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 203
Score = 242 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
E LI +L R+PG G +SARR + + E LA+A ++ + +C ICGN+
Sbjct: 4 PGPFERLIGLLKRLPGVGEKSARRMAFFVFQAPEGYSIELADAFLSLKKNLSVCEICGNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
PC IC D RD S + VVE + DL ++E++ + LY+VLGG++SPLD +
Sbjct: 64 TDRQPCNICSDPLRDRSTLCVVEGIEDLLSIEQAGVYDGLYYVLGGTVSPLDGEDLPEGS 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDY 185
+ LI IE ++ E+I A + +EG T H ++ LKG+ D+K +RL+YG+P+G +++
Sbjct: 124 LDGLINMIERGRVSEVIVATNPRVEGDMTYHAVLSALKGMSDLKKSRLSYGLPVGGSIEF 183
Query: 186 LDDGTIFEAIRSR 198
D T+ A+ +R
Sbjct: 184 ADRVTLHAAMETR 196
>gi|20141819|sp|Q9ZDA4|RECR_RICPR RecName: Full=Recombination protein recR
gi|292572052|gb|ADE29967.1| Recombination protein RecR [Rickettsia prowazekii Rp22]
Length = 199
Score = 242 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 89/200 (44%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K +I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C
Sbjct: 1 MNK---TNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
ICGN+DT C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R
Sbjct: 58 EICGNLDTKSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQ 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
P + + L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G
Sbjct: 118 NPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIG 177
Query: 181 SELDYLDDGTIFEAIRSRTV 200
ELDYLD+GT+ AI R
Sbjct: 178 GELDYLDEGTLSAAISLRQP 197
>gi|261392501|emb|CAX50052.1| recombination protein RecR [Neisseria meningitidis 8013]
gi|316985096|gb|EFV64049.1| recombination protein RecR [Neisseria meningitidis H44/76]
gi|325128357|gb|EGC51241.1| recombination protein RecR [Neisseria meningitidis N1568]
gi|325132579|gb|EGC55272.1| recombination protein RecR [Neisseria meningitidis M6190]
gi|325134516|gb|EGC57161.1| recombination protein RecR [Neisseria meningitidis M13399]
gi|325138352|gb|EGC60921.1| recombination protein RecR [Neisseria meningitidis ES14902]
gi|325142492|gb|EGC64896.1| recombination protein RecR [Neisseria meningitidis 961-5945]
gi|325198370|gb|ADY93826.1| recombination protein RecR [Neisseria meningitidis G2136]
gi|325200132|gb|ADY95587.1| recombination protein RecR [Neisseria meningitidis H44/76]
gi|325204221|gb|ADY99674.1| recombination protein RecR [Neisseria meningitidis M01-240355]
gi|325205987|gb|ADZ01440.1| recombination protein RecR [Neisseria meningitidis M04-240196]
Length = 205
Score = 242 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 104/193 (53%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 8 AFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHCAMCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|218768239|ref|YP_002342751.1| recombination protein RecR [Neisseria meningitidis Z2491]
gi|20139753|sp|Q9JUB6|RECR_NEIMA RecName: Full=Recombination protein recR
gi|121052247|emb|CAM08572.1| putative recombination protein [Neisseria meningitidis Z2491]
gi|309378620|emb|CBX22798.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 205
Score = 242 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 103/193 (53%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL++ K + L +A+ +V C+ C
Sbjct: 8 AFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCARCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|325130316|gb|EGC53083.1| recombination protein RecR [Neisseria meningitidis OX99.30304]
Length = 205
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 104/193 (53%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ LI L +P GP+SA+R HL++ K + L +A+ +V C++C
Sbjct: 8 AFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCAMCNTFCE 67
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
C IC D+ RD ++VV AD+ +E + + LY VL G ++ + I +
Sbjct: 68 GGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALD 127
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G EL+Y+D
Sbjct: 128 RLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDA 187
Query: 189 GTIFEAIRSRTVL 201
GT+ +A+ R ++
Sbjct: 188 GTLAQAVYERRLI 200
>gi|167041264|gb|ABZ06020.1| putative Toprim domain protein [uncultured marine microorganism
HF4000_005D21]
gi|167045769|gb|ABZ10415.1| putative Toprim domain protein [uncultured marine bacterium
HF4000_APKG3108]
Length = 201
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 85/192 (44%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
KEIE LIKI+A++PG GP+SA+R L L+ +E+L PL +A +Y V C +CGN+
Sbjct: 6 AKEIEELIKIIAKLPGLGPKSAKRIVLKLINNREELAKPLVNTLAQVYKNVIRCKVCGNL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ + C ++ D I VVE++AD+W ++ S YH+LGG+L L+ + +
Sbjct: 66 KSANSNCTCSNKNYDQ--ICVVENIADMWVIQSSGIYKGHYHILGGTLPSLESKKDDGLL 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ SL+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++L
Sbjct: 124 VSSLVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGVPVGGEIEFL 183
Query: 187 DDGTIFEAIRSR 198
DDGT+F A ++R
Sbjct: 184 DDGTLFSAFKNR 195
>gi|225163779|ref|ZP_03726078.1| recombination protein RecR [Opitutaceae bacterium TAV2]
gi|224801609|gb|EEG19906.1| recombination protein RecR [Opitutaceae bacterium TAV2]
Length = 198
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70
E L + L ++PG G RSA R LHL+ +K L L +A+ + V C+ CGN+ TD
Sbjct: 5 ERLQQQLKQLPGLGYRSAERIALHLLVEKPARLPALVQALEDAARTVRRCTRCGNLAETD 64
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C +C D RD +++ VVE V DL A+ERS A YHVL G LSP++ +GP+D+ L
Sbjct: 65 LCPLCADPTRDPAIVCVVEHVPDLVAMERSAAYRGHYHVLHGKLSPINGVGPDDLNYAPL 124
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIPMGSELDYLDD 188
+R++ I ELI A+S +EG+ T H++ +L + +KITR+ +G+P G+ + Y D
Sbjct: 125 ADRVQRGDIHELILALSNDVEGEATCHFLTQQLTTLQPALKITRIGFGLPSGAGVLYADS 184
Query: 189 GTIFEAIRSRTV 200
T+ A+ +RT
Sbjct: 185 VTLKSALEARTS 196
>gi|297182625|gb|ADI18783.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11
cluster bacterium HF4000_37C10]
Length = 201
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 83/192 (43%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
KEIE LIKI++++PG GP+SA+R L L+ +++L PL +A +Y V C +CGN+
Sbjct: 6 AKEIEELIKIISKLPGLGPKSAKRIVLKLINNRDELAKPLVNTLAQVYKNVIRCKVCGNL 65
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ + C ++ D I VVE++AD+W ++ S YH+LGG+L L+ + +
Sbjct: 66 KSANSNCTCSNKNYDQ--ICVVENIADMWVIQSSGIYKGHYHILGGTLPSLESKKDDGLL 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
+ SL+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++L
Sbjct: 124 VSSLVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGLPVGGEIEFL 183
Query: 187 DDGTIFEAIRSR 198
DDGT+F A ++R
Sbjct: 184 DDGTLFSAFKNR 195
>gi|282890065|ref|ZP_06298598.1| hypothetical protein pah_c010o058 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500071|gb|EFB42357.1| hypothetical protein pah_c010o058 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 200
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
+ I LI++L ++PG G RSA R L++ E+ L ++ + K+ CS C
Sbjct: 2 RYPSHLI-KLIQVLKKLPGVGARSAERFAFQLMEWDEEKLREFGTILSQVPEKIQACSAC 60
Query: 64 GNVDTT-DPCAICIDQQRDASVI-IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121
G + C C D R AS I V+ D++++E ++ LYHVLGG LSPLD G
Sbjct: 61 GCLKEEAGGCPFCDDLVRQASQILCVISSPRDVFSIEETREYKGLYHVLGGLLSPLDGFG 120
Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181
PE + + SL RIE+ +I E++ A+ +T+EG TA YI +L + V+++RLAYG+P+GS
Sbjct: 121 PERLSLASLKGRIEIHQIHEVVIALGSTLEGDATALYIKRELGTLPVQVSRLAYGLPVGS 180
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
LDY+D GT+ A R
Sbjct: 181 SLDYVDGGTLARAFSGRASF 200
>gi|189219684|ref|YP_001940325.1| Recombinational DNA repair protein RecR [Methylacidiphilum
infernorum V4]
gi|189186542|gb|ACD83727.1| Recombinational DNA repair protein RecR [Methylacidiphilum
infernorum V4]
Length = 199
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 110/196 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I+NLI L +PG GPRSA R TL+L+++ + LA+++ I K+ CS CG
Sbjct: 4 FPPAIQNLIHSLKELPGIGPRSAERITLYLLEETKGTKQKLAQSINEIGAKIKPCSRCGF 63
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C+IC+D RD +V D+ +ER+ A +YHVLG +SPL+ PED+
Sbjct: 64 YTEETLCSICLDHSRDKQCFCLVIHPIDVIKIERTGAFRGVYHVLGKKISPLEGHVPEDL 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L++RI+ +K RE+I A E + TA YI LK ++++ LA G+P GS L+Y
Sbjct: 124 PLSPLLQRIDEEKPREIILAFGTDAEAEATALYIGQILKKRAIRVSSLAMGLPAGSGLEY 183
Query: 186 LDDGTIFEAIRSRTVL 201
D T+ A+ R L
Sbjct: 184 ADSVTLSYALSGRREL 199
>gi|297183474|gb|ADI19605.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11
cluster bacterium HF0770_37D02]
Length = 201
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE+LIK+++++PG GP+SA+R L L+ +E+L+ PLA +A +Y V C+ICGN+ +
Sbjct: 9 IEDLIKLISKLPGLGPKSAKRIVLKLINNREELIKPLANTLAQVYKNVVRCTICGNLKSV 68
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
A C ++ I VVE++AD+W ++ S YH+LGG+L L+ + + + S
Sbjct: 69 S--ANCTCSNKNYKQICVVENIADMWVIQSSGIYKGHYHILGGTLPALESKKDDGLLVSS 126
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LDDG
Sbjct: 127 LVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGLPVGGEIEFLDDG 186
Query: 190 TIFEAIRSR 198
T+F A ++R
Sbjct: 187 TLFSAFKNR 195
>gi|313680265|ref|YP_004058004.1| DNA replication and repair protein recr [Oceanithermus profundus
DSM 14977]
gi|313152980|gb|ADR36831.1| DNA replication and repair protein RecR [Oceanithermus profundus
DSM 14977]
Length = 197
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 121/195 (62%), Gaps = 3/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI+ LAR+PG GP+SA++ LHL + K + A+A+ + V +C CGN
Sbjct: 3 YPDRLLALIRALARLPGVGPKSAQKLGLHLAQNKAEAAEL-AQALEEVRRHVGVCERCGN 61
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ C +C D RDA VI VVE AD+ A+E+S +YHVLGG+L+PL+ +GPE +
Sbjct: 62 LAEGPLCPVCADPARDAGVIAVVETAADVLAIEKSGEYTGVYHVLGGALNPLEGVGPEQL 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++SL+ER RE+I A S T+EG+ TA Y+ ++L G K++R AYG+P+G L+Y
Sbjct: 122 RVESLLERARSA--REVILATSMTVEGEATAAYLSERLAGGPAKLSRPAYGLPVGGTLEY 179
Query: 186 LDDGTIFEAIRSRTV 200
+D+ T+ A+ R
Sbjct: 180 VDEVTLARALAHRQP 194
>gi|313606312|gb|EFR83260.1| recombination protein RecR [Listeria monocytogenes FSL F2-208]
Length = 144
Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 63/142 (44%), Positives = 96/142 (67%)
Query: 59 LCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
CS+CG++ DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D
Sbjct: 2 FCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMD 61
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
IGPEDI I L++R++ I E+I A + +EG+ TA YI LK +K+TR+A+G+P
Sbjct: 62 GIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLP 121
Query: 179 MGSELDYLDDGTIFEAIRSRTV 200
+G +L+Y D+ T+ +A+ R
Sbjct: 122 VGGDLEYADEVTLSKAMEGRRE 143
>gi|33240548|ref|NP_875490.1| recombinational DNA repair protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238076|gb|AAQ00143.1| Recombinational DNA repair protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 169
Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 70/168 (41%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
+HL+++ E+ + + A+ N KV C C ++ C IC++ +RD S++ VV D
Sbjct: 1 MHLLRQPEEKIKAFSNALLNARTKVGQCKKCFHLTAEIECEICLNPKRDKSLLCVVADSR 60
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
DL ALER++ LYHVLGG +SP+D IGPE + I +L++R+ + E+I A++ ++EG
Sbjct: 61 DLIALERTREYKGLYHVLGGLISPMDGIGPELLNISALVQRVSNESTAEVILALTPSVEG 120
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
TT+ YI LK VK+TR+AYG+P+GSEL+Y D+ T+ AI R
Sbjct: 121 DTTSLYIARLLKVF-VKVTRIAYGLPVGSELEYADEVTLTRAIEGRRE 167
>gi|294053805|ref|YP_003547463.1| recombination protein RecR [Coraliomargarita akajimensis DSM 45221]
gi|293613138|gb|ADE53293.1| recombination protein RecR [Coraliomargarita akajimensis DSM 45221]
Length = 198
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
E L++ ++PG G RSA R + L+ +K + L L ++ V C CGN+
Sbjct: 3 PAFEELLQQFKKLPGLGYRSAERIAMQLLVEKPESLERLLSSLQRAQQVVGRCEQCGNLA 62
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
CA+C D++RD V+ VVE V DL A+ERS A YHVL G LSP+ +GPED+
Sbjct: 63 EEGTCAVCTDERRDPQVLCVVEHVTDLMAIERSAAWKGQYHVLHGKLSPIHGVGPEDLNF 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDYL 186
+L +R+ IRE++ A+S IEGQ T HYI +++ ++++R+ +G+P G + Y
Sbjct: 123 SALEKRLSAGSIREIVLALSNDIEGQATCHYIQEEIVGERAIQVSRIGFGLPSGGGVTYA 182
Query: 187 DDGTIFEAIRSRTV 200
D T+ A+ +R V
Sbjct: 183 DSVTLKSALEARRV 196
>gi|6093947|sp|O30823|RECR_HAEDU RecName: Full=Recombination protein recR
gi|2407232|gb|AAC46216.1| recombinational DNA repair protein [Haemophilus ducreyi]
Length = 174
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD-ASVIIVVE 89
HL+++ LA+A+ + C+ C + C IC + +R + + +VE
Sbjct: 1 MAYHLLQRNRNGGLNLAKALNEAMTHIGHCNACRTFTEEEECTICKNPRRQISGQLCIVE 60
Query: 90 DVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149
D+ A+E++ + Y VL G LSPLD IGP +IG+ L +R+E + E+I A + T
Sbjct: 61 MPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQQRLEQESFHEIILATNPT 120
Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
IEG TA+YI + +VK+TR+A+GIP+G L+ +D T+ + R
Sbjct: 121 IEGDATANYIAEICHLYNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDF 172
>gi|282857784|ref|ZP_06266993.1| recombination protein RecR [Pyramidobacter piscolens W5455]
gi|282584454|gb|EFB89813.1| recombination protein RecR [Pyramidobacter piscolens W5455]
Length = 201
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 117/196 (59%), Gaps = 1/196 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ IE+LI +L + PG G +SARR +++++ E LA ++ + ++ C CGN+
Sbjct: 4 PEPIEHLISLLKKFPGVGEKSARRMAFYVLQEGEGFGTDLARSVGELNRRLTTCEKCGNL 63
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL-DRIGPEDI 125
T PC IC D RD S++ V E + DL ++E+S N LY VLG SLSPL DR +
Sbjct: 64 TETQPCPICSDPLRDRSLLCVTETIEDLVSIEQSGLFNGLYFVLGTSLSPLEDRESLPEG 123
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++SL +R E IRE I A + IEG T + +++ L+ + VK +RLAYG+P+G +++
Sbjct: 124 TVRSLRKRFEEYPIREAIIATNPRIEGDMTFYALLEALRDLPVKKSRLAYGLPVGGSIEF 183
Query: 186 LDDGTIFEAIRSRTVL 201
D T+ A+ SR +
Sbjct: 184 ADRVTLHAALESRQEI 199
>gi|304387501|ref|ZP_07369690.1| recombination protein R [Neisseria meningitidis ATCC 13091]
gi|304338388|gb|EFM04509.1| recombination protein R [Neisseria meningitidis ATCC 13091]
Length = 206
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 60/201 (29%), Positives = 104/201 (51%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+ A+R HL++ K + L +A+ +V C
Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKLAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ +
Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G
Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|162149234|ref|YP_001603695.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5]
gi|209545028|ref|YP_002277257.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5]
gi|161787811|emb|CAP57409.1| putative recombination protein recR [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532705|gb|ACI52642.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5]
Length = 197
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 133/196 (67%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G +IE LI +LAR+PG GPRSARRA L L+++ + + PLA+AM V CS CG
Sbjct: 1 MGGTDIERLIALLARLPGLGPRSARRAALALLRQPQARMLPLAQAMEQAARSVRTCSSCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+DT DPC IC D RD ++ VVE V DLWALER+ +Y VLGG+LS L +GP+D
Sbjct: 61 NLDTHDPCTICADPGRDRGLVCVVETVGDLWALERAGVHRGVYQVLGGTLSALAGMGPDD 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + SL+ RIE +RE+I A+ AT++G TTAH++ D+L DV ++R+ G+PMG LD
Sbjct: 121 LNVASLLARIEQGGVREIILALGATVDGATTAHWLQDRLAAFDVPVSRVGQGVPMGGALD 180
Query: 185 YLDDGTIFEAIRSRTV 200
LDDGT+ A+ +R
Sbjct: 181 VLDDGTLAAALMARRP 196
>gi|218283246|ref|ZP_03489307.1| hypothetical protein EUBIFOR_01895 [Eubacterium biforme DSM 3989]
gi|218216001|gb|EEC89539.1| hypothetical protein EUBIFOR_01895 [Eubacterium biforme DSM 3989]
Length = 195
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 111/196 (56%), Gaps = 2/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K ++LI ++PG G ++A R ++ E + +AE + N+ KV C+ CG
Sbjct: 1 MYPKTFDDLIYEFQKLPGVGAKTAERYAFTVLSWNEDEISEMAETLINLKKKVKKCTCCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ + C C +R+ ++I VV++ D+ +E + N +YHVL G ++ + P+
Sbjct: 61 NLTEDELCEFCKSSKRNQNIICVVQNPKDISVIESMQEFNGVYHVLDGLINTQKGVLPDQ 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I SL++RI E+I A+ T+EG+TTA YI L+G +++RLA+GIP+GS LD
Sbjct: 121 LNIMSLLKRINENT-EEVILALDPTVEGETTALYISKLLEGK-CRVSRLAHGIPVGSHLD 178
Query: 185 YLDDGTIFEAIRSRTV 200
Y D T+ +A R
Sbjct: 179 YTDAMTLLKAFEGRKS 194
>gi|296125711|ref|YP_003632963.1| recombination protein RecR [Brachyspira murdochii DSM 12563]
gi|296017527|gb|ADG70764.1| recombination protein RecR [Brachyspira murdochii DSM 12563]
Length = 203
Score = 237 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 119/196 (60%), Gaps = 2/196 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L +I++R+PG G R+A R L+L E+ L A+ + +++ + LCS C ++
Sbjct: 7 QSLDKLTQIISRLPGIGGRTAMRLALYLFDCDEEYLKEFADTLYTLHDNIKLCSKCYSLS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC + +R+ + I VVE D+ A+E+++ N +YHVLGG ++PL IG DI I
Sbjct: 67 DNDICYICSNDKREHNKICVVETYPDMLAIEKTEEYNGVYHVLGGLIAPLKGIGISDIRI 126
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAYGIPMGSELDY 185
+ LIER+ + I E++ A SA++E TTA YI LK + ++TR+ YGI + S+++
Sbjct: 127 KELIERVNTENIDEIMIAFSASLEADTTAGYIFKLLKDNNYTGRVTRITYGISLSSDIEN 186
Query: 186 LDDGTIFEAIRSRTVL 201
D ++ +I R +
Sbjct: 187 ADSRSLARSILDRVEM 202
>gi|319942673|ref|ZP_08016980.1| hypothetical protein HMPREF9464_02199 [Sutterella wadsworthensis
3_1_45B]
gi|319803756|gb|EFW00691.1| hypothetical protein HMPREF9464_02199 [Sutterella wadsworthensis
3_1_45B]
Length = 208
Score = 237 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 118/208 (56%), Gaps = 8/208 (3%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVK-KKEQLLGPLAEAMANIYNKVCL 59
M ++ + I L+K L +PG+GPRSA+RA L+ K+ L L +A+A+ KV
Sbjct: 1 MPQE-SSPAIAALVKALEALPGYGPRSAQRAAFFLLSPKRRGELQALRQALADAETKVHR 59
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C C IC D RDAS++ VVE V D ALE+S LY +LGG LSP+D
Sbjct: 60 CPRCRTWCEGAVCEICADPSRDASLLCVVETVQDQMALEKSLNWPGLYFILGGRLSPMDD 119
Query: 120 IGPEDIGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRL 173
+GP +IG L+ RIE +RE++ A S T EG TA+Y+M +K ++ITRL
Sbjct: 120 MGPTEIGFPELLVRIEEGLAENGLREIVVATSYTPEGDATAYYLMGAVKKRWPQLRITRL 179
Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A G+P G E++Y D TI AI R +
Sbjct: 180 ARGLPSGLEVEYTDLATIAAAIEDRRQI 207
>gi|58039072|ref|YP_191036.1| recombination protein RecR [Gluconobacter oxydans 621H]
gi|73621489|sp|Q5FTB6|RECR_GLUOX RecName: Full=Recombination protein recR
gi|58001486|gb|AAW60380.1| Recombination protein RecR [Gluconobacter oxydans 621H]
Length = 198
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 98/193 (50%), Positives = 133/193 (68%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+I+ LI +LAR+PG GPRSARRA L L+++ E + PLA M +V CS+CGN+DT
Sbjct: 6 DIDQLITMLARLPGLGPRSARRAALALLRQPESRMLPLAHLMERAATRVKTCSLCGNLDT 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
DPC IC D RD +I VVE V DLWALER+ +Y VLGG+LS L +GP+D+ ++
Sbjct: 66 VDPCHICTDAGRDRGLICVVETVGDLWALERAGVHRGVYQVLGGTLSALAGLGPDDLNVR 125
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L ERIE +RE+I A+SAT+EG TTAH++ ++L V +TR+ +G+PMG LD LDD
Sbjct: 126 PLFERIEEGGVREVILALSATVEGATTAHWLQERLLPTGVTVTRVGHGVPMGGALDVLDD 185
Query: 189 GTIFEAIRSRTVL 201
GT+ A+ +R L
Sbjct: 186 GTLAAALTARRSL 198
>gi|187735818|ref|YP_001877930.1| recombination protein RecR [Akkermansia muciniphila ATCC BAA-835]
gi|187425870|gb|ACD05149.1| recombination protein RecR [Akkermansia muciniphila ATCC BAA-835]
Length = 202
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + L+ L ++PG G R A R L +++ +A + V C
Sbjct: 1 MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPC 60
Query: 61 SICGNV-DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
+CG +PCA C D++RD+ +I VVE D+ +ERS A LYH LGG LSPLD
Sbjct: 61 PVCGFFSTEGEPCAACRDEERDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDD 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
+ PED+ IQSL+ER+ + E+I A + +EG+ TA Y+ LK +D +I+R A G+P
Sbjct: 121 VEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPA 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
GS L + D T+ +A+ RT L
Sbjct: 181 GSGLSHADTLTLMKALEGRTRL 202
>gi|148260990|ref|YP_001235117.1| recombination protein RecR [Acidiphilium cryptum JF-5]
gi|172047773|sp|A5G016|RECR_ACICJ RecName: Full=Recombination protein recR
gi|146402671|gb|ABQ31198.1| recombination protein RecR [Acidiphilium cryptum JF-5]
Length = 196
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 88/186 (47%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+ ++AR+PG GPRSARR L L+ ++EQ L PL A+ +V +C +CG
Sbjct: 1 MMGPEIERLVGLMARLPGLGPRSARRIVLRLMAEREQRLLPLIAALDAACQRVAVCPVCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+D+ PC IC D R+ +I VVE VAD WALER+ YHVLGG LS + GPED
Sbjct: 61 GLDSQQPCMICADAAREP-LICVVETVADQWALERAAVYRGRYHVLGGLLSAIAGHGPED 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ R+ +RE+I A+ AT++GQ TAHY+ ++L V +TRLA G+P+G ++
Sbjct: 120 LGIDRLVARL-DGSVREVILALPATVDGQATAHYLTERLATCGVSVTRLAQGVPVGGSIE 178
Query: 185 YLDDGT 190
LD+GT
Sbjct: 179 ILDEGT 184
>gi|203287906|ref|YP_002222921.1| recombination protein RecR [Borrelia recurrentis A1]
gi|201085126|gb|ACH94700.1| recombination protein RecR [Borrelia recurrentis A1]
Length = 194
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 105/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI++++++PG G ++A R ++ + L + + ++ ++ C C N
Sbjct: 3 IQDLIELVSKLPGIGKKTAARMVYDILYTGKNFSRALGQILIRLHLEIQKCKNCYNFAEE 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + R+ +I VVE DL +E +K + Y VL G L PL IGP+++ +
Sbjct: 63 ELCDICTNLNRNKGIICVVEMPQDLEVIEATKEYDGFYFVLHGHLDPLRNIGPDELNLDK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I++ K E+I A +IEG TA+YI + LK +D+ +TR+A G+P G + D
Sbjct: 123 LENYIKLLKAEEVIIATEFSIEGDVTANYISNLLKDLDINVTRIASGLPAGGSISNADKV 182
Query: 190 TIFEAIRSRTVL 201
T A+R R +
Sbjct: 183 TTLRALRLRLKM 194
>gi|326404390|ref|YP_004284472.1| recombination protein RecR [Acidiphilium multivorum AIU301]
gi|325051252|dbj|BAJ81590.1| recombination protein RecR [Acidiphilium multivorum AIU301]
Length = 196
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 88/186 (47%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G EIE L+ ++AR+PG GPRSARR L L+ ++EQ L PL A+ +V +C CG
Sbjct: 1 MMGPEIERLVGLMARLPGLGPRSARRIVLRLMAEREQRLLPLIAALDAACQRVAVCPTCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+D+ PC IC D R+ +I VVE VAD WALER+ YHVLGG LS + GPED
Sbjct: 61 GLDSQQPCMICADAAREP-LICVVETVADQWALERAAVYRGRYHVLGGLLSAIAGHGPED 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+GI L+ R+ +RE+I A+ AT++GQ TAHY+ ++L V +TRLA G+P+G ++
Sbjct: 120 LGIDRLVARL-DGSVREVILALPATVDGQATAHYLTERLATCGVSVTRLAQGVPVGGSIE 178
Query: 185 YLDDGT 190
LD+GT
Sbjct: 179 ILDEGT 184
>gi|258404641|ref|YP_003197383.1| recombination protein RecR [Desulfohalobium retbaense DSM 5692]
gi|257796868|gb|ACV67805.1| recombination protein RecR [Desulfohalobium retbaense DSM 5692]
Length = 203
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 2/203 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQ + ++ LA++PG GP+SA R L L+K ++ L E++ + +CLC
Sbjct: 1 MQSNKLPAPLRKVVDELAQLPGVGPKSALRMGLTLLKWPQEKAEGLGESIKQLRRTLCLC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C ++ +PCAIC D RD SV+ ++ D L +E + Y VLGG LSPLD +
Sbjct: 61 EQCASLTDQNPCAICADVARDGSVLCLIPDWDSLLVMEEAGFFRGKYFVLGGLLSPLDGV 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178
P+ + + L +R++ +IRE++ A+ T E + T ++ + L K D+++ RLA GIP
Sbjct: 121 NPDQLELDRLEKRLDQGEIREVVLALGTTTEAEATESHLKNLLHRKYPDLRVARLAQGIP 180
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+ L ++D T+ ++++ R L
Sbjct: 181 LGAHLKFMDRETLKQSMQYRQSL 203
>gi|203284372|ref|YP_002222112.1| recombination protein RecR [Borrelia duttonii Ly]
gi|201083815|gb|ACH93406.1| recombination protein RecR [Borrelia duttonii Ly]
Length = 194
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 105/192 (54%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI++++++PG G ++A R ++ E L + + ++ ++ C C N
Sbjct: 3 IQDLIELVSKLPGIGKKTAARMVYDILYTGENFSRTLGQILIRLHLEIQKCKNCYNFAEE 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC + R+ +I VVE DL +E +K + Y VL G L PL IGP+++ +
Sbjct: 63 ELCNICTNLNRNKGIICVVEMPQDLEVIEATKEYDGFYFVLHGHLDPLRNIGPDELNLNK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L I++ K E+I A +IEG TA+YI + LK +D+ +TR+A G+P G + D
Sbjct: 123 LENYIKLLKAEEVIIATEFSIEGDVTANYISNLLKDLDINVTRIASGLPAGGSISNADKV 182
Query: 190 TIFEAIRSRTVL 201
T A+R R +
Sbjct: 183 TTLRALRLRLKM 194
>gi|225619843|ref|YP_002721100.1| recombination protein RecR [Brachyspira hyodysenteriae WA1]
gi|254790754|sp|C0QZV8|RECR_BRAHW RecName: Full=Recombination protein recR
gi|225214662|gb|ACN83396.1| recombination protein RecR [Brachyspira hyodysenteriae WA1]
Length = 201
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 119/196 (60%), Gaps = 2/196 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ ++ L +I++R+PG G R+A R L+L ++ L ++ +++++ + LC +C ++
Sbjct: 5 QSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSDVLSSLHENIKLCQVCYSLS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
D C IC + +R+ + I +VE D+ A+E+++ N +YH+LGG +SPL IG DI I
Sbjct: 65 DNDICDICSNDKREHNKICIVESYPDMLAIEKTEEYNGVYHILGGLISPLKGIGISDIRI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185
+ LIER+ I E++ A SA++E TTA YI LK + +ITR+ YGI + S+++
Sbjct: 125 KELIERVNNNSIEEIMIAFSASLEADTTASYIYKTLKDNNFNGRITRITYGISLASDIEN 184
Query: 186 LDDGTIFEAIRSRTVL 201
D ++ +I R +
Sbjct: 185 ADSRSLARSILDRVDM 200
>gi|116073035|ref|ZP_01470297.1| RecR protein [Synechococcus sp. RS9916]
gi|116068340|gb|EAU74092.1| RecR protein [Synechococcus sp. RS9916]
Length = 167
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADL 94
++++ E+ + AEA+ ++V C C ++ C IC + +R +I VV D DL
Sbjct: 1 MLRQPEEQIQSFAEALLAARSQVGQCQTCFHLSAEPTCEICRNPERSTGMICVVADSRDL 60
Query: 95 WALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQT 154
ALER++ + YHVLGG +SP+D IGP+ + I SL+ R+E + ++E+I A++ ++EG T
Sbjct: 61 LALERTREYSGRYHVLGGLISPMDGIGPDMLQITSLVRRVEQEGVQEVILALTPSVEGDT 120
Query: 155 TAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
T+ Y+ LK V ++R+AYG+P+GSEL+Y DD T+ A+ R
Sbjct: 121 TSLYLARLLKPFTV-VSRIAYGLPVGSELEYADDVTLTRALEGRRA 165
>gi|154484286|ref|ZP_02026734.1| hypothetical protein EUBVEN_01998 [Eubacterium ventriosum ATCC
27560]
gi|149734763|gb|EDM50680.1| hypothetical protein EUBVEN_01998 [Eubacterium ventriosum ATCC
27560]
Length = 163
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97
++ + LA +M + V C C + D C IC ++RD I+VVE D+ A
Sbjct: 1 MPKEQVESLANSMIDAKKNVRYCKCCYTLTDQDICPICSSKERDHKTIMVVETTKDMAAY 60
Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157
E+ +YH+L G+++P+ IG DI ++ L ER++ + E+I A ++++EG+ TA
Sbjct: 61 EKIGEYKGVYHILHGAINPMAGIGQNDIKLKELFERLKD-DVNEVIIATNSSVEGEATAM 119
Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
YI +K + +K+TR+A G+P+G +L+Y+D+ T+ A++ R
Sbjct: 120 YITKVIKPLGIKVTRIASGVPVGGDLEYVDNVTLLRALQGRVT 162
>gi|182414592|ref|YP_001819658.1| recombination protein RecR [Opitutus terrae PB90-1]
gi|177841806|gb|ACB76058.1| recombination protein RecR [Opitutus terrae PB90-1]
Length = 198
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
E L + L ++PG G RS+ R LHL+ +K Q L L A+ V C+ CGN+
Sbjct: 2 PSAFEKLQQQLKQLPGLGYRSSERIALHLLVEKPQRLPALVAALEEAARTVRRCTRCGNL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C IC D++RD S++ VVE+V DL ALERS A +YHVL G LSP+ +GP+D+
Sbjct: 62 AEAELCPICADERRDPSLVCVVEEVPDLVALERSGAYRGVYHVLHGKLSPMHGVGPDDLN 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDY 185
+ SL+ R+E + ELI A+S +EG+ T HY+ ++L KG +ITR+ +G+P G + Y
Sbjct: 122 VASLLARVESGAVGELILALSNDVEGEATCHYLTEQLKKGKAPQITRIGFGLPSGGGVLY 181
Query: 186 LDDGTIFEAIRSRTV 200
D T+ A+ +R
Sbjct: 182 ADSVTLKSALDARRS 196
>gi|294789273|ref|ZP_06754511.1| recombination protein RecR [Simonsiella muelleri ATCC 29453]
gi|294482698|gb|EFG30387.1| recombination protein RecR [Simonsiella muelleri ATCC 29453]
Length = 197
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 5/201 (2%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M T LI L +P G ++A+R L+ L++A+ N ++ C
Sbjct: 1 MSNAYT-----QLIHALKILPNVGNKTAQRMAHTLLHTNRDGAAQLSQAIENALKQIHNC 55
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C + + CAIC + QRDAS +++V+ AD+ A+E ++ + LY VL G ++P +
Sbjct: 56 QLCHDFCEGELCAICANPQRDASRLMIVQMPADIAAMEAARCHDGLYFVLMGQVNPSQEM 115
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I ++ LI R+ + E+I A + T EG TA+ + + K KI+RLA G+P+G
Sbjct: 116 DLRSIALEQLIARLSGSSVEEIIIATAHTAEGDATAYILAELFKNQHYKISRLARGMPLG 175
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SEL+Y+D GT+ +A+ R +L
Sbjct: 176 SELEYVDAGTLAQAVYDRNLL 196
>gi|148284115|ref|YP_001248205.1| recombination protein RecR [Orientia tsutsugamushi str. Boryong]
gi|166918741|sp|A5CCA2|RECR_ORITB RecName: Full=Recombination protein recR
gi|146739554|emb|CAM79283.1| recombination protein [Orientia tsutsugamushi str. Boryong]
Length = 203
Score = 234 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 85/195 (43%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
IE LI A++PG G RSARR L+L++ KE + L + ++ N + C CGN+
Sbjct: 5 SNIIEELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG-PEDI 125
D C IC +RD+S+I +VE VADLWALERSK YHVLG +LS + +
Sbjct: 65 DVVSICNICRHSERDSSIIAIVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAINSL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ RI K++E+I A ++TI+GQ TA +++D LK ++KI++LA GIP+G ELDY
Sbjct: 125 KLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGELDY 184
Query: 186 LDDGTIFEAIRSRTV 200
LD+GT+ A ++R
Sbjct: 185 LDEGTLLAAFKARQS 199
>gi|189184710|ref|YP_001938495.1| recombination protein RecR [Orientia tsutsugamushi str. Ikeda]
gi|238692026|sp|B3CV64|RECR_ORITI RecName: Full=Recombination protein recR
gi|189181481|dbj|BAG41261.1| recombination protein RecR [Orientia tsutsugamushi str. Ikeda]
Length = 203
Score = 234 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 85/195 (43%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
I+ LI A++PG G RSARR L+L++ KE + L + ++ N + C CGN+
Sbjct: 5 SNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG-PEDI 125
D C IC +RD+S I VVE VADLWALERSK YHVLG +LS + +
Sbjct: 65 DIVSICNICKHSERDSSTIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAVNSL 124
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
+ L+ RI K++E+I A ++TI+GQ TA +++D LK ++KI++LA GIP+G ELDY
Sbjct: 125 KLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGELDY 184
Query: 186 LDDGTIFEAIRSRTV 200
LD+GT+ A ++R
Sbjct: 185 LDEGTLLAAFKARQS 199
>gi|297621416|ref|YP_003709553.1| Recombination protein recR [Waddlia chondrophila WSU 86-1044]
gi|297376717|gb|ADI38547.1| Recombination protein recR [Waddlia chondrophila WSU 86-1044]
Length = 204
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 111/196 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + LI+ L R+PG G +SA R +++ + L A+ ++ + K+ C CG
Sbjct: 9 YPKHLLQLIEALKRLPGVGNKSAERFAFQMLEWTPKHLKLTADLISQLPEKLKHCEECGC 68
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + CA C ++ + ++ V+ D++A+E + +Y VLG +SPL+ GPE +
Sbjct: 69 LIGDEQCAFCQPKRMEQEMMCVIASPKDVYAIEETHQFKGVYQVLGFLISPLEGKGPERL 128
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
++ L ERI IRE++ A+ +T+EG T+ Y+ +L+ + V ++RLA G+PMGS LDY
Sbjct: 129 PLEKLNERIRRLGIREVVIALDSTLEGDATSLYLKRELEPLKVNVSRLALGLPMGSSLDY 188
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ A R
Sbjct: 189 VDGGTLARAFSGRAAF 204
>gi|332970689|gb|EGK09670.1| recombination protein R [Kingella kingae ATCC 23330]
Length = 207
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 101/191 (52%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70
NLI L +P G ++A+R L+++ L A+ ++ C +C D
Sbjct: 11 SNLIHALRVLPNVGVKTAQRMAFALLQQNRDGAAQLLSALDLALKQIHNCQLCNTFCQDD 70
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C C D +RD+ +++V AD+ A+E ++ + LY VL G +SP + I + L
Sbjct: 71 LCHTCTDPRRDSRRLMIVHMPADVSAMELARCHDGLYFVLMGQVSPTQDMDLSHIALDKL 130
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
+ RI + E+I A + T EG TA+ + + KI+RLA G+P+GSEL+Y+D GT
Sbjct: 131 VARIAQHPVDEIIIATAFTAEGDATAYVLSELFANQPYKISRLARGMPLGSELEYVDAGT 190
Query: 191 IFEAIRSRTVL 201
+ +A+ R +L
Sbjct: 191 LAQAVYERQLL 201
>gi|330993790|ref|ZP_08317722.1| Recombination protein recR [Gluconacetobacter sp. SXCC-1]
gi|329759058|gb|EGG75570.1| Recombination protein recR [Gluconacetobacter sp. SXCC-1]
Length = 198
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 93/197 (47%), Positives = 134/197 (68%), Gaps = 1/197 (0%)
Query: 5 ITGK-EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
++G+ EI+ L+ +L R+PG GPRSARRA L L+++ + PLA+AM V CS C
Sbjct: 1 MSGRGEIDRLVTLLGRLPGLGPRSARRAALALLRQPHARMLPLAQAMEQAARAVRTCSRC 60
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
GN+DTTDPC IC D RD ++ VVE+V DLWALER+ +Y VLGG+LS L +GP+
Sbjct: 61 GNLDTTDPCGICTDPARDDGLVCVVENVGDLWALERAGVHRGVYQVLGGTLSALSGVGPD 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
D+ +Q L++RI +RE+I A+ T+EG TT H++ ++L DV+++R+ G+P+G L
Sbjct: 121 DLNVQPLLDRIAAGGVREVILALGTTVEGATTMHWLHERLARFDVQVSRVGQGVPVGGAL 180
Query: 184 DYLDDGTIFEAIRSRTV 200
D LDDGT+ AI +R
Sbjct: 181 DVLDDGTLAAAIMARRP 197
>gi|71083215|ref|YP_265934.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91762355|ref|ZP_01264320.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1002]
gi|123647013|sp|Q4FNA8|RECR_PELUB RecName: Full=Recombination protein recR
gi|71062328|gb|AAZ21331.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718157|gb|EAS84807.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 203
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
EIE LIK+++++PG GP+SA+R L L+ +++L+ P+A +A +Y V C CG +
Sbjct: 5 NEIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPMANTLAQVYKNVIRCQSCGTLK 64
Query: 68 TTDP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C + + + I VVED+AD W++E S +H+LGG++S ED+
Sbjct: 65 SNSLGCNNCENSKEKYNKICVVEDIADQWSIENSNIYKGYFHILGGTIS-SAGQRKEDLL 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I SL+ER+ + I E+I A SAT+EGQTTA+YI D LK K+T+LA G+P+G E++ L
Sbjct: 124 INSLVERVSRENIEEVILATSATVEGQTTAYYIEDSLKKTSTKVTKLAQGLPVGGEIESL 183
Query: 187 DDGTIFEAIRSRT 199
DDGT++ A ++RT
Sbjct: 184 DDGTLYSAFKNRT 196
>gi|242279900|ref|YP_002992029.1| recombination protein RecR [Desulfovibrio salexigens DSM 2638]
gi|259563691|sp|C6BXI4|RECR_DESAD RecName: Full=Recombination protein recR
gi|242122794|gb|ACS80490.1| recombination protein RecR [Desulfovibrio salexigens DSM 2638]
Length = 201
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + + + LA++PG GP+SA R L ++K ++ + + +++ ++ K+C+C C ++
Sbjct: 5 PEPLRVVAQELAKLPGLGPKSALRIALTMLKMPKEKVTGIGQSVIDLREKLCICEQCASI 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
T PC IC D +R+ + +V + L A+E Y VLGG LSPLD + P+ +
Sbjct: 65 TDTCPCRICSDPKREHDKLCLVSEWDSLLAIEEMGLYRGYYLVLGGLLSPLDGVTPQHLE 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELD 184
Q L ER+E +++ELI A+ AT++ + TA YI + + K ++++RLA GIP+GSE+
Sbjct: 125 FQKLEERLEKGEVKELILALGATVDAEATASYIKNMVESKYPGIELSRLAQGIPIGSEVK 184
Query: 185 YLDDGTIFEAIRSRTVL 201
Y D T+ +++ R L
Sbjct: 185 YTDKETLRQSLEYRQKL 201
>gi|269213985|ref|ZP_05983321.2| recombination protein RecR [Neisseria cinerea ATCC 14685]
gi|269144904|gb|EEZ71322.1| recombination protein RecR [Neisseria cinerea ATCC 14685]
Length = 206
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 106/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + LI L +P GP+SA+R HL++ K + L +A+ +V C
Sbjct: 1 MMNPKKQDAFQRLIGALKVLPNVGPKSAQRIAYHLLQHKRKEAEELVDALQTALRQVDHC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+C C+IC D RD +++V AD+ +E + + LY VL G ++ +
Sbjct: 61 SMCNTFCEGGLCSICADPSRDVRKLMIVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I + L ER++ ++I E+I A + T EG TA + + K + KI+RL+ GIP+G
Sbjct: 121 DVSAIALDKLAERLKKEEIEEIIIATAFTAEGNATAFVLSEFFKKLPYKISRLSQGIPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+Y+D GT+ +A+ R ++
Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201
>gi|256828011|ref|YP_003156739.1| recombination protein RecR [Desulfomicrobium baculatum DSM 4028]
gi|256577187|gb|ACU88323.1| recombination protein RecR [Desulfomicrobium baculatum DSM 4028]
Length = 201
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ ++ + +PG GP+SA R L L+K E+ + + + + + +CS C +
Sbjct: 5 PAPLQKIVDQFSALPGVGPKSALRMALTLLKWPEESVRSFGRDIEGLRSALHICSRCCGL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+DPC +C D +R + +V + L +E S Y +LGG LSPLD I +
Sbjct: 65 ADSDPCHLCADPKRTPEQLCLVSEWDSLMVMEESGIFKGRYLILGGLLSPLDGIDARSLE 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELD 184
+ L + ++RE+I A+ +T+E + T Y+ + L DV +TRLA GIP+GSEL
Sbjct: 125 MDKLESILREGQVREVILALGSTMEAEATGSYVHNLLTRSFPDVAVTRLAQGIPLGSELK 184
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ ++++ R L
Sbjct: 185 YVDRETLKQSLKHRQSL 201
>gi|162448527|ref|YP_001610894.1| DNA repair and genetic recombination protein [Sorangium cellulosum
'So ce 56']
gi|161159109|emb|CAN90414.1| DNA repair and genetic recombination protein [Sorangium cellulosum
'So ce 56']
Length = 238
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 114/199 (57%), Gaps = 7/199 (3%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+ + ++LAR+PG G ++A+R L LV E L + + + + C CG++
Sbjct: 39 LSRVAQLLARLPGVGEKTAQRFALFLVTAGEDTARDLGGELVELCDHIRPCIRCGHIAEL 98
Query: 70 D-----PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC+D +RD +++ VV V DL A+ERS A+ Y VLG LSPL+ +G E+
Sbjct: 99 DDGGRALCAICLDTRRDGALLCVVARVQDLLAIERSGAMRGRYFVLGRLLSPLEGVGAEE 158
Query: 125 IGIQSLIERIEV--KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ +++L R+ + +RE++ A +++G+ TA + +L + +++TR+A G+P G +
Sbjct: 159 LPLEALRARVRDPEQPVREVLVATPPSVDGEATALLLARELGAMGIQVTRIASGVPHGGD 218
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L++ D T+ AI R
Sbjct: 219 LEFADQVTLGRAIEGRKSF 237
>gi|254456022|ref|ZP_05069451.1| recombination protein RecR [Candidatus Pelagibacter sp. HTCC7211]
gi|207083024|gb|EDZ60450.1| recombination protein RecR [Candidatus Pelagibacter sp. HTCC7211]
Length = 203
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 83/195 (42%), Positives = 128/195 (65%), Gaps = 2/195 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
EIE LIK+++++PG GP+SA+R L L+ +++L+ PLA + +Y V C+ CG++
Sbjct: 5 NEIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPLASTLDQVYKNVTRCNFCGSLK 64
Query: 68 TT-DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C + + + I VVED+AD W++E S +H+LGG++S + ED+
Sbjct: 65 SNLSGCINCENSKEKYNKICVVEDIADQWSIENSNIFQGYFHILGGTISSV-GQRKEDLL 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I SL+ER+ + I E+I A SAT+EGQTTA+YI D LK K+T+LA G+P+G E++ L
Sbjct: 124 INSLVERVNKEGIEEVILATSATVEGQTTAYYIQDSLKNTSAKVTKLAQGLPVGGEIENL 183
Query: 187 DDGTIFEAIRSRTVL 201
DDGT+F A ++R L
Sbjct: 184 DDGTLFSAFKNRANL 198
>gi|323160542|gb|EFZ46488.1| recombination protein RecR [Escherichia coli E128010]
Length = 160
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Query: 45 PLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAV 103
LA+A+ +++ C+ C + C IC + +R + I VVE AD++A+E++
Sbjct: 1 RLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQF 60
Query: 104 NALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ Y VL G LSPLD IGP+DIG+ L +R+ +KI E+I A + T+EG+ TA+YI +
Sbjct: 61 SGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC 120
Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
DV+ +R+A+G+P+G EL+ +D T+ ++ R +
Sbjct: 121 AQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 158
>gi|319790367|ref|YP_004152000.1| recombination protein RecR [Thermovibrio ammonificans HB-1]
gi|317114869|gb|ADU97359.1| recombination protein RecR [Thermovibrio ammonificans HB-1]
Length = 201
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I + +E LI+ LA +PG R+A RA L L + E+ + A + +V C CG
Sbjct: 2 IYPENLELLIEYLAEVPGISERAAERAVLLLSRLPEERRRQVINAFREL-EQVTPCKECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C +C D +R + I VVE D ++E+ LYHVLGG +SPL+ IGPED
Sbjct: 61 LPAAGELCRVCSDPERSRTTICVVEQPRDAISIEKLGEYKGLYHVLGGVISPLEGIGPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ ++SL ERI+ ++E+I A++ T+EG+ TA +++D+L+ + VK+ R+ YGIP G +D
Sbjct: 121 LNVKSLFERIKRLGVKEVIIALNPTVEGEATAKFLVDRLQKLGVKVFRIGYGIPYGGTID 180
Query: 185 YLDDGTIFEAIRSRTVL 201
D+ T+ A + ++
Sbjct: 181 NADELTLKRAFEDKKLI 197
>gi|298528793|ref|ZP_07016197.1| recombination protein RecR [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512445|gb|EFI36347.1| recombination protein RecR [Desulfonatronospira thiodismutans
ASO3-1]
Length = 201
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 4/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
MQK + ++ L+ L+ +PG GP+SA R + L+K E L +++ ++ +++C+C
Sbjct: 1 MQK--LPRSMQLLVDRLSDLPGIGPKSALRMAMTLLKWPEDKTRGLGQSITDLRDQLCIC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C + TDPC+IC D R+ + +V + L +E S Y VLGG LSPLD +
Sbjct: 59 SQCAALADTDPCSICSDAMREQDKLCLVSEWDSLLVMEESGFFKGRYLVLGGLLSPLDGV 118
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178
P+ + + L E ++ + E+I A+ T+E +TT YI + ++ V++TRLA GIP
Sbjct: 119 RPDSLELDKLRENLQSGQTSEIILALGTTLEAETTGSYIKNMVEKEYPHVRVTRLAQGIP 178
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+GS+L ++D T+ +++R R +
Sbjct: 179 LGSDLKFMDKETLKQSMRFRQNI 201
>gi|326388513|ref|ZP_08210107.1| recombination protein RecR [Novosphingobium nitrogenifigens DSM
19370]
gi|326206978|gb|EGD57801.1| recombination protein RecR [Novosphingobium nitrogenifigens DSM
19370]
Length = 171
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 86/169 (50%), Positives = 125/169 (73%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
L L+K++E L L +A+A + +++ C CGNVDTT PC IC D +RDA + VVEDV+
Sbjct: 2 LWLIKRRETALTGLVDALATVRDRLVECPTCGNVDTTSPCGICTDTRRDARSLCVVEDVS 61
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
DLWAL+R++ YHVLGG LS LD + PED+ I LI+R+ I E++ A++AT+EG
Sbjct: 62 DLWALDRARLFTGRYHVLGGRLSALDGVRPEDLNIARLIDRVAGGGIDEVVLAMNATLEG 121
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
QTTAHY+ ++L+G V+IT+LA+G+P+G ELDYLD+GT+ +A+R+R +
Sbjct: 122 QTTAHYLAERLEGYPVRITQLAHGLPVGGELDYLDEGTLAQALRARRPI 170
>gi|206896103|ref|YP_002246821.1| recombination protein RecR [Coprothermobacter proteolyticus DSM
5265]
gi|206738720|gb|ACI17798.1| recombination protein RecR [Coprothermobacter proteolyticus DSM
5265]
Length = 201
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68
+E L K R+PG GPR+A + + + ++ + N ++ LC C N+
Sbjct: 3 LEELSKQFRRLPGVGPRTAEKMAYYWLTLEDDEAERFLRTLENFRRQITLCKRCHNLAVG 62
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+D C IC D +RD + I+VVE D+ +E++ + YHVL G +SP + PE + I
Sbjct: 63 SDLCNICQDNRRDKA-IVVVETPQDVENIEQAGIYHGYYHVLHGLISPRKGVTPEQLFIS 121
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDYL 186
L +RI + I ++I A S T+EG TA Y+ +LK ++ I RL G+P+G EL+Y
Sbjct: 122 DLFDRIVDEGITQVIIATSFTMEGDITADYLAKQLKTLQPNIPIYRLGTGLPVGGELNYA 181
Query: 187 DDGTIFEAIRSRTV 200
D T+ A ++
Sbjct: 182 DKATLRAAFITKQK 195
>gi|302343840|ref|YP_003808369.1| recombination protein RecR [Desulfarculus baarsii DSM 2075]
gi|301640453|gb|ADK85775.1| recombination protein RecR [Desulfarculus baarsii DSM 2075]
Length = 192
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73
+ L R+PG G ++A R LHL + + + LA A+A + +V C+ C N+ DPCA
Sbjct: 1 MGALCRLPGIGRKTAERLALHLARARPEEARALAAAVARVGAEVNTCARCRNLADRDPCA 60
Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133
IC D RD+ ++ VVE ADL A+E + A LY VL G+LSPLD +GP +G+ +L R
Sbjct: 61 ICADPARDSGLLCVVESPADLAAMEAAGAYRGLYFVLSGALSPLDGVGPGQLGLDALTRR 120
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
+RELI A ++T+EG+ TA + L + I+RL YG+P+G +L Y+D TI
Sbjct: 121 AAEG-VRELIIATNSTVEGEATADLVAQSLARPGLLISRLGYGMPVGGDLKYIDGLTIAR 179
Query: 194 AIRSRTV 200
A+ SR
Sbjct: 180 ALESRRR 186
>gi|317153156|ref|YP_004121204.1| recombination protein RecR [Desulfovibrio aespoeensis Aspo-2]
gi|316943407|gb|ADU62458.1| recombination protein RecR [Desulfovibrio aespoeensis Aspo-2]
Length = 201
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ I G + +++ L+ +PG GP+SA R L L+K + + +A+ ++ +CLC
Sbjct: 2 QNIPGP-LREVVEQLSSLPGVGPKSALRMALTLLKMPRERANGVGQAILDLRENLCLCEE 60
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + PCAIC D R+ + VV + L A+E Y VLGG LSPLD + P
Sbjct: 61 CACLAEASPCAICADPSRETDQLCVVPEWDALLAMEDMGVFRGRYLVLGGLLSPLDGVSP 120
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180
++ L + +RELI A+ AT++ + TA +I + + + ++RLA GIPMG
Sbjct: 121 ANLETDRLRRHLRAGHVRELILALGATLDAEATASFIKNMVGADFSGITVSRLAQGIPMG 180
Query: 181 SELDYLDDGTIFEAIRSRTV 200
E+ ++D T+ +++ R
Sbjct: 181 GEVKFMDRETLRQSLVHRQK 200
>gi|332295104|ref|YP_004437027.1| Recombination protein recR [Thermodesulfobium narugense DSM 14796]
gi|332178207|gb|AEE13896.1| Recombination protein recR [Thermodesulfobium narugense DSM 14796]
Length = 203
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
K + +L L+ +PG GP+ A R + ++ E+ L EA+ N+ + CS C
Sbjct: 3 YPKPLSDLSHELSLLPGIGPKLALRLAFFISQRGEEKNLSLIEALQNLK-NIKKCSQCNA 61
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ TDPC IC D R+ ++ VV DV DLW +E +K+ + Y VL + PL+ I PE
Sbjct: 62 LSETDPCEICSDPSRNNEILCVVSDVRDLWKIESTKSYSGRYFVLNSLIVPLEGIDPEKA 121
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK------GIDVKITRLAYGIPM 179
G+ L I KK +E++ A ++EGQTT+ YI ++L G ++TRLA G+ M
Sbjct: 122 GMTELFSLIRAKKPKEIVIAFDFSMEGQTTSLYIKERLSSQRDQLGYIPQLTRLAVGLSM 181
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G L D+ TI +AI R +
Sbjct: 182 GDNLGNTDEFTISQAILHRQKI 203
>gi|218887361|ref|YP_002436682.1| recombination protein RecR [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|259563693|sp|B8DQU5|RECR_DESVM RecName: Full=Recombination protein recR
gi|218758315|gb|ACL09214.1| recombination protein RecR [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 201
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ ++ L++ L+R+PG GP+SA R + L+K L A+ ++ + + LC CG +
Sbjct: 5 PEPLKALVEQLSRLPGLGPKSALRLAMTLLKWPASETRRLGRAVHDLRDNLHLCGRCGAL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPC IC D R + +V + L LE Y +LGG L+PLD + + +
Sbjct: 65 TDVDPCGICTDPARSGETLCLVSEWDSLLTLEEGGFYKGQYLILGGLLAPLDNLHADSLE 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELD 184
+ L +R+ +RE++ A+ T+E + TA YI + + + V++TRLA GIP+GSE+
Sbjct: 125 LDRLTKRMAEGTVREVVMALGTTVEAENTATYIRNMIVRQYPQVRVTRLAQGIPLGSEVK 184
Query: 185 YLDDGTIFEAIRSRTVL 201
++D T+ ++++ R L
Sbjct: 185 FMDRETLRQSMQYRQDL 201
>gi|317486261|ref|ZP_07945094.1| recombination protein RecR [Bilophila wadsworthia 3_1_6]
gi|316922507|gb|EFV43760.1| recombination protein RecR [Bilophila wadsworthia 3_1_6]
Length = 203
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I + ++ L++ LAR+PG GP+SA R + L+K E L + + ++ + + LC
Sbjct: 1 MDHRI-PEPLKALVEQLARLPGLGPKSAMRVAMTLLKWPEAETRRLGKGIHDLRDNLRLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG + TDPC +C D++RD S++ VV + + LE Y +LGG L+PLD +
Sbjct: 60 SRCGALTETDPCNVCSDKERDDSLLCVVAEWDSMLTLEEGAFYKGRYLILGGLLAPLDNL 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178
E + + L +R+E ++RE++ A+ AT+E +TT + + + V +TRLA GIP
Sbjct: 120 SAESLELDRLTKRLEEGQVREVVLALGATVEAETTGALVRSLVNRRFPGVTVTRLAQGIP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+E+ ++D T+ ++++ R +
Sbjct: 180 LGAEVKFMDRETLRQSLQYRQEI 202
>gi|300869960|ref|YP_003784831.1| recombination protein RecR [Brachyspira pilosicoli 95/1000]
gi|300687659|gb|ADK30330.1| recombination protein, RecR [Brachyspira pilosicoli 95/1000]
Length = 202
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 116/196 (59%), Gaps = 3/196 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
++ L +++AR+PG G RSA R L+L ++ L L+ ++ +++ + LC C ++
Sbjct: 6 SLDKLTQMIARLPGIGGRSAMRIALYLFDSDDEYLSELSNSILSLHKNIKLCRECYSLSE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC +RD + + +VE D+ A+E+++ N +YHVLGG + PL IG DI I+
Sbjct: 66 NDICNICASDKRDRTKLCIVESYTDMIAIEKTEEYNGIYHVLGGLIEPLKGIGISDIRIK 125
Query: 129 SLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDY 185
LI+R++ I E+I A A++E TTA YI L+ D KI+R+ YGI + S+++
Sbjct: 126 ELIDRVKDNSSIEEIIIAFGASLEADTTASYINKTLRNNNFDKKISRITYGISLASDIEN 185
Query: 186 LDDGTIFEAIRSRTVL 201
D ++ +I R V+
Sbjct: 186 ADSRSLARSIADRVVM 201
>gi|323697996|ref|ZP_08109908.1| recombination protein RecR [Desulfovibrio sp. ND132]
gi|323457928|gb|EGB13793.1| recombination protein RecR [Desulfovibrio desulfuricans ND132]
Length = 201
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++ ++ L+ +PG GP+SA R L L+K + + +++ ++ ++CLC C +
Sbjct: 5 PGPLKEVVDQLSSLPGIGPKSALRIALTLLKMPRERAAGVGQSILDLRERLCLCEDCACL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ PCAIC D RD + +V + L ALE Y VLGG LSPLD + P +
Sbjct: 65 AESSPCAICADATRDTGQLCLVPEWDALLALEEMGVYRGKYLVLGGLLSPLDGVDPGQLE 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELD 184
I+ L R+ ELI A+ AT++ ++TA Y+ + ++ V +TRLA GIPMG+E+
Sbjct: 125 IERLRRRLASGDFSELILALGATLDAESTASYVKNLVESEFPGVSVTRLAQGIPMGAEVK 184
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D T+ +++ R +
Sbjct: 185 YMDKETLKQSLVHRQKM 201
>gi|119953251|ref|YP_945460.1| recombination protein RecR [Borrelia turicatae 91E135]
gi|119862022|gb|AAX17790.1| recombination protein RecR [Borrelia turicatae 91E135]
Length = 194
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 100/192 (52%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
I++LI +L+++PG G ++A R ++ E+ L + + ++ + C C N+
Sbjct: 3 IQDLIVLLSKLPGIGRKTAVRMVYDILYNGEEYSRALGQILIGFHSSIRKCKNCHNLAEG 62
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC+D R +I +VE DL +E ++ + LY VL G L PL IGP + +
Sbjct: 63 EFCNICMDLSRCKDMICIVEMPQDLEVIESTREYDGLYFVLHGHLDPLRDIGPNRLNLDK 122
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L + +E+I A +IEG TA+YI LK + + +TR+A G+P G + D
Sbjct: 123 LENYVREVGAQEVIIATEFSIEGDVTANYISGILKNLGINVTRIASGLPAGGSISNADKI 182
Query: 190 TIFEAIRSRTVL 201
T A+R R +
Sbjct: 183 TTLRALRLRLKM 194
>gi|15604961|ref|NP_219745.1| recombination protein RecR [Chlamydia trachomatis D/UW-3/CX]
gi|76788962|ref|YP_328048.1| recombination protein RecR [Chlamydia trachomatis A/HAR-13]
gi|237802663|ref|YP_002887857.1| recombination protein RecR [Chlamydia trachomatis B/Jali20/OT]
gi|237804585|ref|YP_002888739.1| recombination protein RecR [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311041|ref|ZP_05353611.1| recombination protein RecR [Chlamydia trachomatis 6276]
gi|255317342|ref|ZP_05358588.1| recombination protein RecR [Chlamydia trachomatis 6276s]
gi|6685837|sp|O84243|RECR_CHLTR RecName: Full=Recombination protein recR
gi|123607037|sp|Q3KMC2|RECR_CHLTA RecName: Full=Recombination protein recR
gi|3328650|gb|AAC67833.1| Recombination Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167492|gb|AAX50500.1| RecR [Chlamydia trachomatis A/HAR-13]
gi|231272885|emb|CAX09796.1| recombination protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273897|emb|CAX10689.1| recombination protein [Chlamydia trachomatis B/Jali20/OT]
gi|296435756|gb|ADH17930.1| recombination protein RecR [Chlamydia trachomatis G/9768]
gi|296436680|gb|ADH18850.1| recombination protein RecR [Chlamydia trachomatis G/11222]
gi|296437616|gb|ADH19777.1| recombination protein RecR [Chlamydia trachomatis G/11074]
gi|297140115|gb|ADH96873.1| recombination protein RecR [Chlamydia trachomatis G/9301]
gi|297748370|gb|ADI50916.1| RecR [Chlamydia trachomatis D-EC]
gi|297749250|gb|ADI51928.1| RecR [Chlamydia trachomatis D-LC]
Length = 200
Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L ++PG G +SA + L++ + +A+A+ CS C
Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMAQALQEFSTSHATCSNCFC 63
Query: 66 V--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ T PC C + RD+S + +V D++ALE+SK Y VLG LSP+
Sbjct: 64 LKISQTSPCNFCS-ESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLS 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G
Sbjct: 123 LEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSF 182
Query: 184 DYLDDGTIFEAIRSRTVL 201
D++D T+ A R
Sbjct: 183 DFVDANTLARAFSGRNCF 200
>gi|163782475|ref|ZP_02177472.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
gi|159882048|gb|EDP75555.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1]
Length = 202
Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 62/199 (31%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+++ K ++ ++ + RIP +G R A R +L+K + + ++ K+ C
Sbjct: 4 EEVFPKSLKLALESVKRIPTYGERGASRLVYNLLKLSPEERELVVSSLTEASEKLKPCKE 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + + CA+C D +R + VVE+ D +++ER + +YHVL G ++PL+ + P
Sbjct: 64 CYLLTEGELCAVCSDPRRSKKFVCVVEESQDAYSIERLERYKGVYHVLQGRIAPLEGVSP 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180
+D+ I L+ERIE ++RE+I A + EG+ TA+Y+M LK VK+TR++YG+ G
Sbjct: 124 QDLTIDRLLERIEKNRVREIIIATNPNAEGEATANYLMKLLKDRFPSVKVTRVSYGLQFG 183
Query: 181 SELDYLDDGTIFEAIRSRT 199
S L+++D+ ++ ++ +R
Sbjct: 184 SLLEFVDELSLEKSFENRK 202
>gi|194246448|ref|YP_002004087.1| Recombinational DNA repair protein [Candidatus Phytoplasma mali]
gi|254790778|sp|B3R068|RECR_PHYMT RecName: Full=Recombination protein recR
gi|193806805|emb|CAP18232.1| Recombinational DNA repair protein [Candidatus Phytoplasma mali]
Length = 206
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 7/201 (3%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKK-EQLLGPLAEAMANIYNKVCLCSICG 64
+E LI+ +PG G ++A R T L+ +K + + L++ + + N + C+ICG
Sbjct: 3 NSPTVEKLIESFTLLPGVGKKTAERYTFFLINQKNKNKILYLSKHLKELVNNIKSCNICG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C C D QRD S I++V D D++ E+ + LYH+LGG + I PE+
Sbjct: 63 YITEKNICNFCSDSQRDHSTIMIVADNRDVYCFEKINHYHGLYHILGGLIDFSRCIKPEN 122
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHY----IMDKLKGIDVKITRLAYGIPMG 180
+ SL +R+ K I+E+I A ++T+EG+ TA Y + LK +KIT+LAYGIP+G
Sbjct: 123 LNFNSLKDRL--KTIKEIIIATNSTLEGEITATYSKKFLKKYLKDEKIKITKLAYGIPIG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
+ +YLD+ T+ AI +R
Sbjct: 181 LDFNYLDEKTLCNAINNRNNF 201
>gi|15618219|ref|NP_224504.1| recombination protein RecR [Chlamydophila pneumoniae CWL029]
gi|15835834|ref|NP_300358.1| recombination protein RecR [Chlamydophila pneumoniae J138]
gi|16752740|ref|NP_445007.1| recombination protein RecR [Chlamydophila pneumoniae AR39]
gi|33241643|ref|NP_876584.1| recombination protein RecR [Chlamydophila pneumoniae TW-183]
gi|6685852|sp|Q9Z8N9|RECR_CHLPN RecName: Full=Recombination protein recR
gi|4376575|gb|AAD18448.1| Recombination Protein [Chlamydophila pneumoniae CWL029]
gi|7189381|gb|AAF38296.1| recombination protein RecR [Chlamydophila pneumoniae AR39]
gi|8978673|dbj|BAA98509.1| recombination protein [Chlamydophila pneumoniae J138]
gi|33236152|gb|AAP98241.1| RecR [Chlamydophila pneumoniae TW-183]
gi|269303174|gb|ACZ33274.1| recombination protein RecR [Chlamydophila pneumoniae LPCoLN]
Length = 200
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI L ++PG G ++A + L+ + L L A N+ ++ C +C
Sbjct: 4 YPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPLCFT 63
Query: 66 VDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C C ++RD + +V D++ LERSK YHVLG LSP+ E
Sbjct: 64 LKESKEADCHFCR-EERDNQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKHIE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ + L RIE +E+I AI AT+EG TA ++ +L+ V I+RLA G+P+G
Sbjct: 123 NERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQELQHFSVNISRLALGLPIGLSF 182
Query: 184 DYLDDGTIFEAIRSR 198
DY+D GT+ A R
Sbjct: 183 DYVDSGTLARAFSGR 197
>gi|329942834|ref|ZP_08291613.1| recombination protein RecR [Chlamydophila psittaci Cal10]
gi|332287427|ref|YP_004422328.1| recombination protein RecR [Chlamydophila psittaci 6BC]
gi|313848007|emb|CBY17004.1| recombination protein [Chlamydophila psittaci RD1]
gi|325506466|gb|ADZ18104.1| recombination protein RecR [Chlamydophila psittaci 6BC]
gi|328815094|gb|EGF85083.1| recombination protein RecR [Chlamydophila psittaci Cal10]
gi|328914675|gb|AEB55508.1| recombination protein RecR [Chlamydophila psittaci 6BC]
Length = 200
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI L ++PG G ++A + L+ + L + +A + + C C
Sbjct: 4 YPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSELSAARSHCPTCFC 63
Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C+ C + RD S++ +V D++ALERS+ Y+VLG LSP+ +
Sbjct: 64 LKSHPESLCSFCQN-NRDTSILCIVATPKDIFALERSQIFKGHYYVLGALLSPITGKHID 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE K +E+I A+ AT+EG TA ++ +L + I+RLA G+P+G
Sbjct: 123 AERMHLLKQRIEFLKPKEIILALDATLEGDATALFLKQELSHSSISISRLALGLPIGLSF 182
Query: 184 DYLDDGTIFEAIRSRTV 200
DY+D GT+ A R
Sbjct: 183 DYIDSGTLARAFSGRNP 199
>gi|303245253|ref|ZP_07331537.1| recombination protein RecR [Desulfovibrio fructosovorans JJ]
gi|302493102|gb|EFL52964.1| recombination protein RecR [Desulfovibrio fructosovorans JJ]
Length = 204
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 3/204 (1%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + T + L++ LAR+PG GP+SA + + L++ L E + + ++CL
Sbjct: 1 MAVQTTLPAPLVELVEQLARLPGLGPKSALKVAMTLLEWPRGRAETLGEGILRLRERLCL 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CS C + T C +C D RD+ + +V + LE + Y VLGG L PLD
Sbjct: 61 CSRCFGLSETPVCPVCADPSRDSRQLCIVAQWDSIMLLEETAQFGGYYLVLGGLLDPLDG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177
+ P ++ + +L R+ I E I A+ AT+ ++TA +I + L +V++TRLA GI
Sbjct: 121 VTPGNLRLDALRARLREGDIAECILALGATLAAESTASHIKNLLAREFPNVRLTRLAQGI 180
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+E+ Y+D T+ +++R R L
Sbjct: 181 PLGTEVKYVDKETLSQSLRYRQDL 204
>gi|171913849|ref|ZP_02929319.1| recombination protein RecR [Verrucomicrobium spinosum DSM 4136]
Length = 202
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M I LI + +PG G RSA R L ++ + LA A+A + +V +C
Sbjct: 1 MPALDYPAPIRELILQMKSLPGIGQRSAERLVLWMMGRGHARAAELARALAQLEQRVGIC 60
Query: 61 SICGNVDTTDP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CG D C +C +R +V+ VVE AD+ LERS A + YHVLGG LSPLD
Sbjct: 61 PECGFFIERDAACGLCQSDKRQTTVVCVVEQAADVLRLERSGAFSGQYHVLGGRLSPLDN 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
I P D+ I+ L R+ E+I A+SA +EG+ TA+Y+ D L+ + VK+TRLA G+P
Sbjct: 121 ITPSDLRIRELAARVPALGAEEVILALSADVEGEATANYLADILRPLGVKVTRLAQGMPA 180
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G LD++D+ T+ A+ R +
Sbjct: 181 GGGLDHVDEMTLHHALSGRRAM 202
>gi|325266073|ref|ZP_08132759.1| recombination protein R [Kingella denitrificans ATCC 33394]
gi|324982711|gb|EGC18337.1| recombination protein R [Kingella denitrificans ATCC 33394]
Length = 207
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 110/201 (54%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K T LI+ L +P G ++A+R L+++ + LA A+ +V C
Sbjct: 1 MTTKKTTNAYTALIQALRILPNVGAKTAQRMAHTLLQENREGAAELAAALDTALKQVSNC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C C IC D+ RD + +++V AD+ A+E ++ + LY VL G +SP +
Sbjct: 61 QSCNTFCEGGTCEICADETRDPTRLMIVHMPADVAAMEAARCHDGLYFVLMGQVSPAQNM 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
I ++ LI R+ + E+I A S T EG TA+ + + LKG KI+RLA G+P+G
Sbjct: 121 DLGSIALEKLIARLAGSPVTEIIIATSFTAEGDATAYILSELLKGQPYKISRLARGMPLG 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
SEL+Y+D GT+ +A+ R++L
Sbjct: 181 SELEYVDAGTLAQAVYERSLL 201
>gi|296438547|gb|ADH20700.1| recombination protein RecR [Chlamydia trachomatis E/11023]
Length = 200
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L ++PG G +SA + L++ + +A A+ CS C
Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMALALQEFSTSHATCSNCFC 63
Query: 66 V--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ T PC C + RD+S + +V D++ALE+SK Y VLG LSP+
Sbjct: 64 LKISQTSPCNFCS-ESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLS 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G
Sbjct: 123 LEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSF 182
Query: 184 DYLDDGTIFEAIRSRTVL 201
D++D T+ A R
Sbjct: 183 DFVDANTLARAFSGRNCF 200
>gi|220905409|ref|YP_002480721.1| recombination protein RecR [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869708|gb|ACL50043.1| recombination protein RecR [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 202
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+I + ++ L++ LAR+PG GP+SA RA + L+K E L + ++ + + LC
Sbjct: 1 MNKRI-PEPLKALVEQLARLPGLGPKSAMRAAMALLKWPEAETRRLGRGIHDLRDNLHLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG + +TDPC +C D +R + +V + + L+ Y +LGG L+PL+R+
Sbjct: 60 SRCGGLASTDPCPVCADAERARDTLCLVTEWDSMLTLDEGGFYRGQYMILGGLLAPLERM 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178
E + L+ R++ ++ ELI A+ AT+E + TA +I + + V+I+RLA GIP
Sbjct: 120 DAEGLDTDRLVRRLDEGEVTELILALGATLEAENTATFIRRLVAGRFPHVRISRLAQGIP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+E+ Y+D T+ ++++ R L
Sbjct: 180 LGAEVKYMDKETLRQSLQYRQDL 202
>gi|166154451|ref|YP_001654569.1| recombination protein RecR [Chlamydia trachomatis 434/Bu]
gi|166155326|ref|YP_001653581.1| recombination protein RecR [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|255348598|ref|ZP_05380605.1| recombination protein RecR [Chlamydia trachomatis 70]
gi|255503138|ref|ZP_05381528.1| recombination protein RecR [Chlamydia trachomatis 70s]
gi|255506816|ref|ZP_05382455.1| recombination protein RecR [Chlamydia trachomatis D(s)2923]
gi|301335710|ref|ZP_07223954.1| recombination protein RecR [Chlamydia trachomatis L2tet1]
gi|229890140|sp|B0B7F6|RECR_CHLT2 RecName: Full=Recombination protein recR
gi|229890142|sp|B0BBM1|RECR_CHLTB RecName: Full=Recombination protein recR
gi|165930439|emb|CAP03932.1| recombination protein [Chlamydia trachomatis 434/Bu]
gi|165931314|emb|CAP06886.1| recombination protein [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|289525279|emb|CBJ14755.1| recombination protein [Chlamydia trachomatis Sweden2]
gi|296434827|gb|ADH17005.1| recombination protein RecR [Chlamydia trachomatis E/150]
Length = 200
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L ++PG G +SA + L++ + +A A+ CS C
Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMALALQEFSTSHATCSNCFC 63
Query: 66 V--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ T PC C + RD+S + +V D++ALE+SK Y VLG LSP+
Sbjct: 64 LKISQTSPCNFCS-ESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLS 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G
Sbjct: 123 LEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSF 182
Query: 184 DYLDDGTIFEAIRSRTVL 201
D++D T+ A R
Sbjct: 183 DFVDANTLARAFSGRNCF 200
>gi|288818833|ref|YP_003433181.1| recombination protein [Hydrogenobacter thermophilus TK-6]
gi|288788233|dbj|BAI69980.1| recombination protein [Hydrogenobacter thermophilus TK-6]
gi|308752420|gb|ADO45903.1| recombination protein RecR [Hydrogenobacter thermophilus TK-6]
Length = 202
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 122/199 (61%), Gaps = 2/199 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ + K ++ I+ + +IP +G R A R +L+K ++ + + N+ + C+
Sbjct: 4 EDVFPKAMKEAIESIIKIPTYGERGASRFIYNLLKLPQEERIIIVNTLQNLAQSIKKCAE 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CG + + C+IC D++R I +VE+ D +A+ER + +YHVLGG ++PL+ I P
Sbjct: 64 CGLLTDREVCSICSDEKRSKKFICIVEESQDAYAIERLERYTGVYHVLGGRIAPLEGISP 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180
+D+ I SLI+RIE K +E+I A + +EG+ TA+Y++ LK ++KITR++YG+ G
Sbjct: 124 QDLSIDSLIQRIERYKPKEVIVATNPNVEGEATANYLIKLLKRRFPNLKITRMSYGLQFG 183
Query: 181 SELDYLDDGTIFEAIRSRT 199
+ +++ D+ ++ ++I +R
Sbjct: 184 TLIEFADELSLEKSIENRK 202
>gi|88800843|ref|ZP_01116398.1| recombination protein RecR [Reinekea sp. MED297]
gi|88776416|gb|EAR07636.1| recombination protein RecR [Reinekea sp. MED297]
Length = 203
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 100/191 (52%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70
E LI+ L +PG G RSA+R L L++++ + L+ A+++ V C C + D
Sbjct: 8 EKLIQALQALPGVGVRSAQRMALQLLEREPETGQRLSSALSDALTLVHKCPQCRTLTEDD 67
Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130
C +C + RDASVI VV D +E S A Y VL G LSP+D IGPE +G+ L
Sbjct: 68 LCGVCANPDRDASVICVVASDVDRAGIEMSAAFQGRYFVLHGVLSPIDGIGPETLGLVEL 127
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT 190
+E ++ E++ A+ +E + T H+I ++ K + +TR+ + LD D
Sbjct: 128 VELARSGEVSEIMLALDDRLESEATVHFIKEQFKESGLTVTRVPFHQMKSGALDQADSRV 187
Query: 191 IFEAIRSRTVL 201
I +A+ + L
Sbjct: 188 IEQALTQKQTL 198
>gi|289549262|ref|YP_003474250.1| recombination protein RecR [Thermocrinis albus DSM 14484]
gi|289182879|gb|ADC90123.1| recombination protein RecR [Thermocrinis albus DSM 14484]
Length = 202
Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 2/199 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
++ ++ +++L IP +G RSA R + +K + + + + + CS
Sbjct: 4 QEYIPPVLKRALEVLTYIPTYGERSASRFVYNFLKLSPEERDEILKTLFELSRSARKCSE 63
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
CG V TDPC IC D +R+ + VVE+ D +A+ER + +YHVLGG ++PL+ I
Sbjct: 64 CGLVSDTDPCRICSDTKRNKRFLCVVEESQDAYAIERLERYTGVYHVLGGRIAPLEGISA 123
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180
ED+ I+ L+ RIE ++E+I A + +EG+ TA+YI+ +K VK++R+++G+ G
Sbjct: 124 EDLNIEGLLRRIENYGVKEVILATNPNVEGEATANYILSLIKKRFPSVKVSRISHGLQFG 183
Query: 181 SELDYLDDGTIFEAIRSRT 199
S ++ DD ++ +I +R
Sbjct: 184 SLIELADDLSLERSIENRR 202
>gi|270285301|ref|ZP_06194695.1| recombination protein RecR [Chlamydia muridarum Nigg]
gi|270289318|ref|ZP_06195620.1| recombination protein RecR [Chlamydia muridarum Weiss]
gi|301336698|ref|ZP_07224900.1| recombination protein RecR [Chlamydia muridarum MopnTet14]
gi|13878697|sp|Q9PKF4|RECR_CHLMU RecName: Full=Recombination protein recR
Length = 200
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L ++PG G +SA + L++ + + AM C C
Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFC 63
Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ T T C C + RD+S + +V D+++ E+SK Y VLG LSP+
Sbjct: 64 LKTSKTSSCDFCS-ESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLS 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G
Sbjct: 123 LEKLNILKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMPVGLSF 182
Query: 184 DYLDDGTIFEAIRSRTVL 201
D++D T+ A R
Sbjct: 183 DFIDSNTLARAFSGRNCF 200
>gi|15835129|ref|NP_296888.1| recombination protein RecR [Chlamydia muridarum Nigg]
gi|7190550|gb|AAF39353.1| recombination protein RecR [Chlamydia muridarum Nigg]
Length = 203
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI L ++PG G +SA + L++ + + AM C C
Sbjct: 7 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFC 66
Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ T T C C + RD+S + +V D+++ E+SK Y VLG LSP+
Sbjct: 67 LKTSKTSSCDFCS-ESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLS 125
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G
Sbjct: 126 LEKLNILKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMPVGLSF 185
Query: 184 DYLDDGTIFEAIRSRTVL 201
D++D T+ A R
Sbjct: 186 DFIDSNTLARAFSGRNCF 203
>gi|239907165|ref|YP_002953906.1| recombination protein RecR [Desulfovibrio magneticus RS-1]
gi|239797031|dbj|BAH76020.1| recombination protein RecR [Desulfovibrio magneticus RS-1]
Length = 204
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 3/204 (1%)
Query: 1 MQKKITGK-EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + T + L+ LA++PG GP+SA + + L++ L EA+ + ++CL
Sbjct: 1 MASQTTLPVPLAELVDQLAKLPGLGPKSALKVAMTLLEWPRPRADGLGEAILRLRERLCL 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C ++ T C +C D R+ + +V + +E + Y VLGG L PL+
Sbjct: 61 CVHCASLSETPVCPVCADPSRNGEQLCLVAQWDAIMQMEETGLYAGRYLVLGGLLDPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177
+ P + + L ++ + E I A+ AT+ +TTA +I + L+ V++TRLA GI
Sbjct: 121 VSPGQLRLDVLRAKLAEGAVTECILALGATLAAETTASHIKNLLEREFPAVRLTRLAQGI 180
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+E+ Y+D T+ +++R R L
Sbjct: 181 PLGAEVKYVDKETLSQSLRYRQDL 204
>gi|46581602|ref|YP_012410.1| recombination protein RecR [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601238|ref|YP_965638.1| recombination protein RecR [Desulfovibrio vulgaris DP4]
gi|46451025|gb|AAS97670.1| recombination protein RecR [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561467|gb|ABM27211.1| DNA replication and repair protein RecR [Desulfovibrio vulgaris
DP4]
gi|311235245|gb|ADP88099.1| recombination protein RecR [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ ++ L+ LA++PG GP+SA R + L+K L + ++ + + LC CG +
Sbjct: 5 PEPLKALVDQLAKLPGLGPKSALRLAMTLLKWPASETRRLGRGIHDLRDNLHLCRRCGAL 64
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPCA+C D R ++ +V + + LE Y +LGG L+PLD + + +
Sbjct: 65 TDCDPCALCTDATRTQDMLCLVSEWDSMLTLEEGGFYRGQYLILGGLLAPLDNVNADSLE 124
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELD 184
++ L R+ ++RE++ A+ T+E + TA +I ++ V++TRLA GIP+G+E+
Sbjct: 125 LERLTRRLAEGQVREVVLALGTTVEAENTATFIRAMVERQYPGVRVTRLAQGIPLGAEVK 184
Query: 185 YLDDGTIFEAIRSRTVL 201
++D T+ ++++ R L
Sbjct: 185 FMDRETLRQSMQYRQEL 201
>gi|303325569|ref|ZP_07356012.1| recombination protein RecR [Desulfovibrio sp. 3_1_syn3]
gi|302863485|gb|EFL86416.1| recombination protein RecR [Desulfovibrio sp. 3_1_syn3]
Length = 202
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/203 (32%), Positives = 119/203 (58%), Gaps = 3/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I + ++ L++ LAR+PG GP+SA RA + L+K E L + ++ + + LC
Sbjct: 1 MHSRI-PEPLKALVEQLARLPGLGPKSAMRAAMTLLKWPEAETRRLGRGIHDLRDNLHLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG + +TDPCA+C D R + +V + + L+ Y +LGG L+PL+R+
Sbjct: 60 SRCGGLSSTDPCAVCADAGRTRETLCLVTEWDSMLTLDEGGFYRGQYMILGGLLAPLERM 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178
E + + L R++ ++ ELI A+ AT+E + TA +I ++ ++++RLA GIP
Sbjct: 120 DSESLDLDRLTRRLDEGEVTELILALGATLEAENTASFIRQMVRKRFPQIRVSRLAQGIP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+E+ Y+D T+ ++++ R +
Sbjct: 180 LGAEVKYMDKETLRQSLQYRQDI 202
>gi|62185098|ref|YP_219883.1| recombination protein RecR [Chlamydophila abortus S26/3]
gi|73621477|sp|Q5L609|RECR_CHLAB RecName: Full=Recombination protein recR
gi|62148165|emb|CAH63922.1| recombination protein [Chlamydophila abortus S26/3]
Length = 200
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI +L ++PG G ++A + L+ + L + +A + + C C
Sbjct: 4 YPDYLSKLISLLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSELSAARSHCPTCFC 63
Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C+ C + RD S++ +V D+++LERS+ Y+VLG LSP+ +
Sbjct: 64 LKSHPESVCSFCQN-NRDTSILCIVATPKDIFSLERSQIFQGHYYVLGALLSPITGRHID 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L +RIE K +E+I A+ AT+EG TA ++ +L ++RLA G+P+G
Sbjct: 123 AERMHLLKQRIEFLKPKEIILALDATLEGDATALFLKQELSHSSASVSRLALGLPIGLSF 182
Query: 184 DYLDDGTIFEAIRSRTV 200
DY+D GT+ A R
Sbjct: 183 DYIDSGTLARAFSGRNP 199
>gi|281358638|ref|ZP_06245116.1| recombination protein RecR [Victivallis vadensis ATCC BAA-548]
gi|281314868|gb|EFA98903.1| recombination protein RecR [Victivallis vadensis ATCC BAA-548]
Length = 210
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
Query: 1 MQKKI-TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + +E LI L ++PG G R A R L ++ + + L L + + + V
Sbjct: 1 MAGNLSYPDAVEELIGALKQLPGIGRRGAERLALSMLGWEPEKLQYLGKLVETLPATVGS 60
Query: 60 CSICGNVD-TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
C CG + + CA+C RD ++ VVE +A ++A+E S YHVLGG LSPLD
Sbjct: 61 CPECGALSNAGELCAVCRLPDRDRQLVCVVETMAQVFAIEASGNFRGRYHVLGGRLSPLD 120
Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
+ ++ LI ++RE+I A+S +EG+ TA Y+ + L+ V++T+ A G+P
Sbjct: 121 AENGAGLNLEKLIGLARSGQVREIILALSPDVEGRATAIYLAELLRDAPVRVTQPALGLP 180
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
G+ L Y D TI A+ RT+L
Sbjct: 181 AGANLSYADGATIAAALSGRTIL 203
>gi|330976059|gb|EGH76125.1| recombination protein RecR [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 161
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 43 LGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKA 102
LA+A+ + V C C + + C C D +RD +++ VVE D++A+E++
Sbjct: 1 GSRLAQALGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG- 59
Query: 103 VNALYHVLGGSLSPLDRIGPEDIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMD 161
Y VL G LSPLD +GPE IGI L+ER+ + E+I A + T+EG+ TAHYI
Sbjct: 60 YRGRYFVLKGHLSPLDGLGPEAIGIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQ 119
Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
L + +R+A+G+P+G ELD +D GT+ + R +
Sbjct: 120 LLHDKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 159
>gi|29840243|ref|NP_829349.1| recombination protein RecR [Chlamydophila caviae GPIC]
gi|33301498|sp|Q823D7|RECR_CHLCV RecName: Full=Recombination protein recR
gi|29834591|gb|AAP05227.1| recombination protein RecR [Chlamydophila caviae GPIC]
Length = 200
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG- 64
+ LI +L ++PG G ++A + L+ + L + +A + + CS C
Sbjct: 4 YPDYLSKLISLLRKLPGIGFKTAEKLAFELLDWDQDQLEAMGQAFSEVSAARSHCSTCFC 63
Query: 65 --NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
N+ ++ C C + RD S + +V D+++LERS+ Y+VLG LSP+
Sbjct: 64 LKNLPESN-CEFCQN-NRDTSTLCIVATPKDIFSLERSQIFKGHYYVLGTLLSPITGKHI 121
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
+ I L +RIE K +E+I A+ AT+EG TA ++ +L I+RLA G+P+G
Sbjct: 122 DVERIGLLKQRIEFLKPQEIILALDATLEGDATALFLKQELAFSSASISRLALGLPIGLS 181
Query: 183 LDYLDDGTIFEAIRSRTV 200
DY+D GT+ A R
Sbjct: 182 FDYVDSGTLARAFSGRNP 199
>gi|301165422|emb|CBW24993.1| recombination protein [Bacteriovorax marinus SJ]
Length = 197
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ + N+I L++IPG G ++A R TL L K L +AM N+ + C CG
Sbjct: 4 PESLLNVIDQLSKIPGVGDKTATRQTLILAKWSADDLNAFGDAMKNLA-NLKACVDCGMY 62
Query: 67 DTTDPCAICIDQQRDASV-IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C IC + +R S + VVE+V D A+ERS LYH+LGG L+PL +GP+++
Sbjct: 63 SDLDYCEICSNSERKESKSVCVVENVTDCLAIERSGNYEGLYHILGGVLNPLMGVGPDEL 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I S ++R+ +++ +I A++ ++EG T YI L DV++ R+ +GIPMG L+Y
Sbjct: 123 KIDSFVKRVRGLEVKNVILAVNPSVEGDATCSYIKQVL-PSDVEVDRIGFGIPMGGSLEY 181
Query: 186 LDDGTIFEAIRSRTVL 201
LD TI +A+ ++ +
Sbjct: 182 LDTMTIAKALENKKKM 197
>gi|325295256|ref|YP_004281770.1| Recombination protein recR [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065704|gb|ADY73711.1| Recombination protein recR [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 201
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I +E LI+ L+ PG R+A RA L L + E + A+ + ++ C CG
Sbjct: 2 IYPDNLELLIRFLSETPGISERAAERAVLSLSRLDEDEKRMITNALREL-ERIKPCVECG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D C +C D +R+ +VI VVE D ++E+ LYHVLGG +SPL+ I PED
Sbjct: 61 LPTEEDLCVVCRDPEREQTVICVVEQPRDAISIEKLGEYKGLYHVLGGVISPLEDISPED 120
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I+SL +RI+ K I+ +I A++ T+EG+ T+ +++D+L+ ++V+I R++YGIP G +D
Sbjct: 121 LRIESLFKRIKEKNIKTVIIALNPTVEGEATSKFLIDRLEKMNVEIYRISYGIPYGGTID 180
Query: 185 YLDDGTIFEAIRSRTVL 201
D+ T+ +A + ++
Sbjct: 181 MADELTLKKAFEDKKLI 197
>gi|297182769|gb|ADI18923.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11
cluster bacterium HF0010_09O16]
Length = 203
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 127/195 (65%), Gaps = 2/195 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
EI++LIKI++++PG GP+SA+R L L+ K++L+ P+A ++ +Y V C++CG++
Sbjct: 5 NEIDDLIKIISKLPGLGPKSAKRIVLKLINNKDELVKPMANSLVQVYKNVTRCNLCGSLK 64
Query: 68 TT-DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C + + + I VVED++D W++E S YH+LGG++ ED+
Sbjct: 65 SNIKGCFNCANVREKFNKICVVEDISDQWSIENSNIFKGYYHILGGTI-ASAGNRKEDLL 123
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186
I SL+ER+ KI E+I A+S T+EGQTTA+YI D LK +V +T+LA G+P+G + L
Sbjct: 124 INSLVERVNKDKIEEVILALSETVEGQTTAYYIRDSLKNSNVSVTKLARGMPIGYSPENL 183
Query: 187 DDGTIFEAIRSRTVL 201
DDGT+ A ++R L
Sbjct: 184 DDGTLLSAFKNRLKL 198
>gi|255322440|ref|ZP_05363585.1| recombination protein RecR [Campylobacter showae RM3277]
gi|255300348|gb|EET79620.1| recombination protein RecR [Campylobacter showae RM3277]
Length = 190
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ R+PG G +SA+R H+ K LA+++ + C ICG +
Sbjct: 6 EKFNELVAAFERLPGVGKKSAQRYAYHVCLKDSFGGLKLAQSIEDAVRFTGKCQICGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD ++ VVE D+ E+S Y VL + I PE
Sbjct: 66 EDEICDICSDETRDKELLAVVESPKDILVFEQSAIYRGRYFVL-------EEITPEQ--T 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L E I + E+IFA++ + +I DKL + VK +++A G+P G L+ +D
Sbjct: 117 EKLREVIRQNGVTEIIFALTPGLSSDAVMVFIEDKLSDLGVKFSKIAQGVPTGVNLENID 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ SRT L
Sbjct: 177 LLSLMKALDSRTEL 190
>gi|94987360|ref|YP_595293.1| recombinational DNA repair protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731609|emb|CAJ54972.1| Recombinational DNA repair protein (RecF pathway)
ref|ZP_00131299.1| 353: Recombinational DNA repair
protein (RecF pathway) [Lawsonia intracellularis
PHE/MN1-00]
Length = 203
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 118/203 (58%), Gaps = 3/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + I + + +I L ++PG GP+SA R + +K E L +++ + +K+ LC
Sbjct: 1 MDQHI-PEILRTVIGQLTKLPGLGPKSAMRIAMTFLKWPESETRSLGKSIYELRDKLGLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG + ++ C +C D +R +++ +V + + LE Y +LGG L+PLD +
Sbjct: 60 SSCGALSDSNLCFVCADSERLDNLLCIVSEWDSMVTLEEVGFFQGRYMILGGLLAPLDNM 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178
G + + I LI+R+ +++E+I A+ +TIE +TTA I + + +++TRLA GIP
Sbjct: 120 GLDKLEIDRLIDRLNKGEVKEVILALGSTIEAETTATMIYSLISKRFPYIRVTRLAQGIP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+G+E+ ++D T+ ++++ R L
Sbjct: 180 LGAEVKFMDRETLRQSLQYRQEL 202
>gi|78355115|ref|YP_386564.1| DNA replication and repair protein RecR [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|78217520|gb|ABB36869.1| DNA replication and repair protein RecR [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 198
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 2/197 (1%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
+ ++ L+ LAR+PG GP+SA R + L+K E L A+A + + + LC CG++
Sbjct: 2 PEPLKALVDRLARLPGLGPKSALRMAMTLLKWPESETRGLGAAIAQLRDNLHLCRRCGSL 61
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
DPCAIC D R + +V + L A+E Y +LGG L+PLD + PE +
Sbjct: 62 TDVDPCAICTDATRGRDTLCLVSEWDSLLAMEDGGFYKGQYMILGGLLAPLDNVNPESLE 121
Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELD 184
++ L R+ ++RE+I + T+E + TA YI + V++TRLA GIP+GSE+
Sbjct: 122 LERLRRRLAEGEVREIILGLGTTLEAENTASYIRSMVNRDFPQVRVTRLAQGIPLGSEVK 181
Query: 185 YLDDGTIFEAIRSRTVL 201
++D T+ ++++ R L
Sbjct: 182 FIDKETLRQSLQFRQDL 198
>gi|118475618|ref|YP_892295.1| recombination protein RecR [Campylobacter fetus subsp. fetus 82-40]
gi|118414844|gb|ABK83264.1| recombination protein RecR [Campylobacter fetus subsp. fetus 82-40]
Length = 189
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + K L+ +IPG G +SA + H+ + LA + + + C
Sbjct: 1 MPNQKLEK-FNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLNLAHTIEDAVRFLKHC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CG + + C IC D RD + +VE D+ +E S + N LY V
Sbjct: 60 SMCGGISENEICDICSDINRDKKTLCIVETPKDILTIEYSNSFNGLYFVFD--------- 110
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
+ + L I+ I+EL+FA++ +I YI DKLK DV T++A GIP G
Sbjct: 111 --DANKLDKLKSNIKENGIKELLFALTPSINSDGMMLYIEDKLKDFDVSFTKIAQGIPTG 168
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
L+ +D ++ +AI+ R L
Sbjct: 169 VSLENVDILSLTKAIKDRRSL 189
>gi|283850681|ref|ZP_06367968.1| recombination protein RecR [Desulfovibrio sp. FW1012B]
gi|283573924|gb|EFC21897.1| recombination protein RecR [Desulfovibrio sp. FW1012B]
Length = 204
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 3/204 (1%)
Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + T + L++ LA++PG GP+SA + + L++ L + + + ++CL
Sbjct: 1 MAAQTTLPAPLVELVEQLAKLPGLGPKSALKVAMTLLEWPRSRADSLGDGILRLRERLCL 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CS C + T C +C D R + +V + LE + Y VLGG L PL+
Sbjct: 61 CSRCAGLSETPVCPVCADPTRRPEELCLVSQWDSVMLLEETAQFGGYYLVLGGLLDPLEG 120
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177
+ P + + +L R+ + E I A+ AT+ ++TA +I + L V++TRLA GI
Sbjct: 121 VTPGQLRLDALRARLAEGAVTECILALGATLAAESTASHIKNLLAREFPGVRLTRLAQGI 180
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+G+E+ Y+D T+ +++R R L
Sbjct: 181 PLGAEVKYVDKETLSQSLRFRQDL 204
>gi|152990929|ref|YP_001356651.1| recombination protein RecR [Nitratiruptor sp. SB155-2]
gi|172048733|sp|A6Q485|RECR_NITSB RecName: Full=Recombination protein recR
gi|151422790|dbj|BAF70294.1| DNA recombination protein RecR [Nitratiruptor sp. SB155-2]
Length = 190
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K+ NL++ L +P G +SA R H+V LA A+ + + + C+ CG +
Sbjct: 6 KKFYNLVEALETLPSIGKKSAGRLAFHMVLHSPMDALKLAHAIEDAVSSIHRCTQCGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD S + +VE D++ +E S + LY V E I +
Sbjct: 66 EDELCYICSDELRDRSSLCLVESARDIYVIEESGEYHGLYFVFESL--------NERI-L 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+L E I+ ++E+IFA + +++ T YI D+L+ + T++A G+P G L+ +D
Sbjct: 117 ANLKEMIKNNGVQEIIFAFTPSMQSDATMLYIEDQLQEFHLHFTKIAQGVPTGVHLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +AI R +
Sbjct: 177 MLSLSKAISERVKI 190
>gi|89898331|ref|YP_515441.1| recombination protein RecR [Chlamydophila felis Fe/C-56]
gi|123483333|sp|Q254J2|RECR_CHLFF RecName: Full=Recombination protein recR
gi|89331703|dbj|BAE81296.1| recombination and repair [Chlamydophila felis Fe/C-56]
Length = 200
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ LI L ++PG G ++A + L+ ++ L L +A + + C C
Sbjct: 4 YPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPCCFC 63
Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ C C + RD S + +V D+++LERS+ Y+VLG LSPL E
Sbjct: 64 LKNFPESQCEFCQN-NRDTSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKHIE 122
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L +RIE +E+I A+ AT+EG TA ++ +L I+RLA G+P+G
Sbjct: 123 EERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQELAYSLASISRLALGLPIGLSF 182
Query: 184 DYLDDGTIFEAIRSRTV 200
DY+D GT+ A R
Sbjct: 183 DYIDSGTLARAFSGRNP 199
>gi|87302304|ref|ZP_01085129.1| RecR protein [Synechococcus sp. WH 5701]
gi|87283229|gb|EAQ75185.1| RecR protein [Synechococcus sp. WH 5701]
Length = 159
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 59/159 (37%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Query: 43 LGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKA 102
+ A+A+ +V CS C ++ C IC +++R + VV D DL ALER++
Sbjct: 1 MQAFADALIAARRQVGQCSRCFHLSADRLCDICRNEERRNGQLCVVADSRDLLALERTRE 60
Query: 103 VNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162
YHVLGG +SP+D IGPE + IQ L+ R++ + + E+I A+ ++EG TT+ Y+
Sbjct: 61 YKGSYHVLGGLISPMDGIGPELLQIQPLVNRVDQETMTEVILALPPSVEGDTTSLYLARL 120
Query: 163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
L+ + ++R+AYG+P+GSEL+Y D+ T+ A+ R +
Sbjct: 121 LRPFCL-VSRIAYGLPVGSELEYADEVTLARALEGRRRM 158
>gi|257484837|ref|ZP_05638878.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 160
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Query: 45 PLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVN 104
LA A+ + V C C + + C C D +RD +++ VVE D++A+E++
Sbjct: 2 RLALALGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YR 60
Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKL 163
Y VL G LSPLD +GPE IGI L+ERI + E+I A + T+EG+ TAHYI L
Sbjct: 61 GRYFVLKGHLSPLDGLGPEAIGIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLL 120
Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+ +R+A+G+P+G ELD +D GT+ + R +
Sbjct: 121 HEKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 158
>gi|222475000|ref|YP_002563415.1| recombination protein (recR) [Anaplasma marginale str. Florida]
gi|222419136|gb|ACM49159.1| recombination protein (recR) [Anaplasma marginale str. Florida]
Length = 170
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 78/169 (46%), Positives = 116/169 (68%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
+HL++ ++ ++ PLA + + C+IC N+DT PC+IC D+ RD S+I VVE++
Sbjct: 1 MHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDTISPCSICSDKGRDQSIICVVEELG 60
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152
DLWA ER + + +YHVLGG+LS L IGPED+ + +++RI ++E+I A S ++G
Sbjct: 61 DLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLGGIVDRIRTHGVKEVIVATSNDMDG 120
Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
Q T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+
Sbjct: 121 QVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 169
>gi|330960249|gb|EGH60509.1| recombination protein RecR [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 170
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 3/170 (1%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92
+ L+++ LA A+ + V C C + + C C D +RD +++ VVE
Sbjct: 1 MQLLERDRSGGSRLALALGQAMDGVGHCRSCRTLTEEEFCPQCADPRRDDTLLCVVEGPT 60
Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERI-EVKKIRELIFAISATIE 151
D++A+E++ Y VL G LSPLD +GP+ IGI L+ERI + E+I A +A +E
Sbjct: 61 DVYAVEQTG-YRGRYFVLKGHLSPLDGLGPDAIGIPQLMERIAQQGTFTEVILATNA-VE 118
Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
G+ TAHYI L + +R+A+G+P+G ELD +D GT+ + R +
Sbjct: 119 GEATAHYIAQLLNDKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 168
>gi|134147639|gb|ABO63960.1| RecR [Bacillus thuringiensis]
gi|134147641|gb|ABO63961.1| RecR [Bacillus thuringiensis]
Length = 152
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 55/146 (37%), Positives = 88/146 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+
Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI
Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122
Query: 126 GIQSLIERIEVKKIRELIFAISATIE 151
I L++R+ + ++E+I A + IE
Sbjct: 123 NIPQLLKRLHDETVQEVILATNPGIE 148
>gi|15606640|ref|NP_214020.1| recombination protein RecR [Aquifex aeolicus VF5]
gi|6093946|sp|O67455|RECR_AQUAE RecName: Full=Recombination protein recR
gi|2983863|gb|AAC07416.1| recombination protein RecR [Aquifex aeolicus VF5]
Length = 211
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ + K ++ ++ + IP +G R A R +L+K +++ + E + + C
Sbjct: 13 EDVFPKSLKEALEGIKEIPTYGERGASRFMYNLLKLEKEKRKEIIEKVLEAVEVLRPCRE 72
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + + C IC D++R I VVE+ D +A+E+ + +YHVL G ++PL+ I
Sbjct: 73 CFLITDREVCPICSDEKRSKKFICVVEESQDAYAIEKLERYKGVYHVLQGHIAPLEGISA 132
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180
ED+ I +L+ERI+ + +E+I A + +EG+ TA+YI + K VKITR AYG G
Sbjct: 133 EDLTIDALMERIKKYQPKEVILATNPNVEGEATANYIAGLIRRKFPAVKITRTAYGFQFG 192
Query: 181 SELDYLDDGTIFEAIRSRT 199
S ++++D+ ++ +++ +R
Sbjct: 193 SLIEFVDEYSLEKSMENRK 211
>gi|283956658|ref|ZP_06374137.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
1336]
gi|283791907|gb|EFC30697.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
1336]
Length = 190
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R HL + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R+ +++ +VE D+ LE S++ N LY VL D + E +
Sbjct: 66 ENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + I I ELIFA++ +I T +I DK K +++ +++A GIP G L+ +D
Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIAQGIPSGVNLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|86150705|ref|ZP_01068921.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
260.94]
gi|121613624|ref|YP_001000939.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926257|ref|ZP_01809942.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|167005850|ref|ZP_02271608.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81-176]
gi|205356281|ref|ZP_03223047.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|315124720|ref|YP_004066724.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|166221929|sp|A1W0P8|RECR_CAMJJ RecName: Full=Recombination protein recR
gi|85841875|gb|EAQ59121.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
260.94]
gi|87249985|gb|EAQ72944.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81-176]
gi|145845428|gb|EDK22521.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|205345886|gb|EDZ32523.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|284926488|gb|ADC28840.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315018442|gb|ADT66535.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 190
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R HL + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R+ +++ +VE D+ LE S++ N LY VL D + E +
Sbjct: 66 ENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D
Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|313682513|ref|YP_004060251.1| DNA replication and repair protein recr [Sulfuricurvum kujiense DSM
16994]
gi|313155373|gb|ADR34051.1| DNA replication and repair protein RecR [Sulfuricurvum kujiense DSM
16994]
Length = 189
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ L +P G +SA R H+V LA A+ N + C CG +
Sbjct: 6 EKFNRLVDALQNLPTVGQKSATRLAYHMVMNDSFGALKLAHAIENAITSLKKCRSCGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C+IC D++R+ V+ +VE+ D+ E + + Y VL E++ I
Sbjct: 66 EDELCSICSDERRNHEVLCIVENAKDILTFEENGLFDGRYFVLDS---------IEELDI 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L I+ I+E+IFA++ +I Q YI DKL DV+ +R+A G+P G L+ +D
Sbjct: 117 AHLRGVIQSG-IKEVIFALTPSIANQGVMLYIEDKLIDCDVRFSRIAQGVPTGVSLENVD 175
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ R +
Sbjct: 176 ILSLTKAMEDRVSI 189
>gi|86150596|ref|ZP_01068819.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596287|ref|ZP_01099524.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562875|ref|YP_002344654.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|20139828|sp|Q9PN35|RECR_CAMJE RecName: Full=Recombination protein recR
gi|85838947|gb|EAQ56213.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88191128|gb|EAQ95100.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360581|emb|CAL35378.1| recombination protein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927111|gb|EFV06462.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929717|gb|EFV08891.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 305]
Length = 190
Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R HL + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R+ +++ +VE D+ LE S++ N LY VL D + E +
Sbjct: 66 ENELCEICSDKERNKNILCIVESPKDILTLEESQSYNGLYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D
Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|330940612|gb|EGH43654.1| recombination protein RecR [Pseudomonas syringae pv. pisi str.
1704B]
Length = 154
Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHV 109
M + V C C + + C C D +RD +++ VVE D++A+E++ Y V
Sbjct: 1 MGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFV 59
Query: 110 LGGSLSPLDRIGPEDIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV 168
L G LSPLD +GPE IGI L+ER+ + E+I A + T+EG+ TAHYI L +
Sbjct: 60 LKGHLSPLDGLGPEAIGIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGL 119
Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+R+A+G+P+G ELD +D GT+ + R +
Sbjct: 120 VASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 152
>gi|86152659|ref|ZP_01070864.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157415527|ref|YP_001482783.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81116]
gi|172047168|sp|A8FMW9|RECR_CAMJ8 RecName: Full=Recombination protein recR
gi|85843544|gb|EAQ60754.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157386491|gb|ABV52806.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni
81116]
gi|307748167|gb|ADN91437.1| Recombination protein recR [Campylobacter jejuni subsp. jejuni M1]
gi|315932412|gb|EFV11355.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 327]
Length = 190
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R HL + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCGQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R+ +++ +VE D+ LE S++ N LY VL D + E +
Sbjct: 66 ENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D
Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|57238135|ref|YP_179385.1| recombination protein RecR [Campylobacter jejuni RM1221]
gi|73621476|sp|Q5HTK0|RECR_CAMJR RecName: Full=Recombination protein recR
gi|57166939|gb|AAW35718.1| recombination protein RecR [Campylobacter jejuni RM1221]
gi|315058696|gb|ADT73025.1| Recombination protein RecR [Campylobacter jejuni subsp. jejuni S3]
Length = 190
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R HL + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R+ +++ +VE D+ LE S++ N LY VL D + E +
Sbjct: 66 ENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D
Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGINLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|153951682|ref|YP_001397647.1| recombination protein RecR [Campylobacter jejuni subsp. doylei
269.97]
gi|171769455|sp|A7H2B7|RECR_CAMJD RecName: Full=Recombination protein recR
gi|152939128|gb|ABS43869.1| recombination protein RecR [Campylobacter jejuni subsp. doylei
269.97]
Length = 190
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R HL + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++R +++ +VE D+ LE S++ N LY VL D + E +
Sbjct: 66 ENELCEICSDEERSKNILCIVESPKDILTLEESQSYNGLYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + + I ELIFA++ +I T +I DK K +++ +++A GIP G L+ +D
Sbjct: 117 EKLKQILLKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIAQGIPSGVNLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|223040226|ref|ZP_03610504.1| recombination protein RecR [Campylobacter rectus RM3267]
gi|222878479|gb|EEF13582.1| recombination protein RecR [Campylobacter rectus RM3267]
Length = 190
Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ R+PG G +SA+R H+ K LA+++ + C ICG +
Sbjct: 6 EKFNELVAAFERLPGVGKKSAQRYAYHVCLKDSFGGLKLAQSIEDAVRFTGKCQICGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD ++ VVE D+ E+S Y L
Sbjct: 66 EDEICDICSDETRDKELLAVVESPKDILVFEQSAIYRGRYFALE---------EITQGQT 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L I + E+IFA++ + +I DKL ++VK +++A G+P G L+ +D
Sbjct: 117 EKLRTVIVQNGVTEIIFALTPGLSSDAVMIFIEDKLSDLNVKFSKIAQGVPTGVNLENID 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ SRT L
Sbjct: 177 ILSLMKALDSRTKL 190
>gi|330444498|ref|YP_004377484.1| recombination protein RecR [Chlamydophila pecorum E58]
gi|328807608|gb|AEB41781.1| recombination protein RecR [Chlamydophila pecorum E58]
Length = 220
Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ L+ L R+PG G ++A + L+ E+ L L CS C
Sbjct: 22 YPSYLSQLVSFLKRLPGIGFKTAEKLAFELLSWDEEQLKALGNVFYETAAARSFCSQCFC 81
Query: 66 VDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ + C C RD S + +V D++ LERSK Y+ LG LSP+
Sbjct: 82 LKESSLTQCEFCSS-TRDTSTLCIVASQKDVFFLERSKVFKGRYYTLGSQLSPMTGQHIP 140
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGS 181
+ +L I+V +E+I A+ AT+EG TA ++ +L+G I+RLA G+P+G
Sbjct: 141 PQRVAALKHYIQVLSPKEIILALDATLEGDATALFLKQELEGASFSGSISRLALGLPVGL 200
Query: 182 ELDYLDDGTIFEAIRSRTV 200
DY+D T+ A R++
Sbjct: 201 SFDYVDVSTLSRAFSGRSL 219
>gi|332704009|ref|ZP_08424097.1| Recombination protein recR [Desulfovibrio africanus str. Walvis
Bay]
gi|332554158|gb|EGJ51202.1| Recombination protein recR [Desulfovibrio africanus str. Walvis
Bay]
Length = 202
Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 3/203 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K+ + + ++ + +AR+PGFGP+SA RA L L+ + L A+ + +C C
Sbjct: 1 MTNKL-PRPLRDVAEQMARLPGFGPKSALRAALALLGMPREQAEGLGRAILTLREHLCFC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S C ++ DPC +C D RD+ +++V D L ALE Y VLGG L+PLD++
Sbjct: 60 SRCNSISEFDPCPVCADPGRDSEQLVLVSDWDSLLALEEGGFFRGQYFVLGGLLAPLDKV 119
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178
PE + L +R+ ++RELI A+ T++ + TA Y+ + ++ +V++TRLA GIP
Sbjct: 120 NPEQLAFDRLRDRLAESEVRELILALGTTMDAEATASYVKNMVERDFPEVRVTRLAQGIP 179
Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201
+GSE+ ++D T+ +++ R L
Sbjct: 180 LGSEVRFVDKETLRQSLLHRQKL 202
>gi|212704317|ref|ZP_03312445.1| hypothetical protein DESPIG_02372 [Desulfovibrio piger ATCC 29098]
gi|212672279|gb|EEB32762.1| hypothetical protein DESPIG_02372 [Desulfovibrio piger ATCC 29098]
Length = 204
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M +I + + L++ LAR+PG GP+SA R + L+K E L + + ++ + + LC
Sbjct: 1 MHSQI-PEPLRALVEQLARLPGLGPKSAMRVAMTLLKWPEAETRRLGKGIHDLRDNLHLC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG + TDPC IC D+ R + +V + + L+ + Y +LGG L+PL +
Sbjct: 60 SRCGGLSATDPCDICKDENRSRDTLCLVNEWDSMLTLDEGGFYHGQYMILGGLLAPLANM 119
Query: 121 --GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYG 176
D+ + LI R+E +IRELI A+ ATI+ + TA +I + ++ ++++RLA G
Sbjct: 120 DSDSLDLDLDRLISRLEEGEIRELILALGATIDAENTASFIRNLVRKRFPHIRVSRLAQG 179
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
IP+G+E+ Y+D T+ ++++ R +
Sbjct: 180 IPLGAEVKYMDRETLRQSLQYRQDI 204
>gi|16124524|ref|NP_419088.1| recombination protein RecR [Caulobacter crescentus CB15]
gi|25398644|pir||D87282 recombination protein RecR [imported] - Caulobacter crescentus
gi|13421404|gb|AAK22256.1| recombination protein RecR [Caulobacter crescentus CB15]
Length = 152
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHV 109
MA KV C CG++D TDPCA+C D RD ++ VVE+V +WA+ER + YHV
Sbjct: 1 MAEAQAKVRTCGTCGSLDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHV 60
Query: 110 LGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVK 169
LGG LS LD IGPE + I L+ R+ + E+I A+ AT++GQTTAHYI D+L +V
Sbjct: 61 LGGLLSALDGIGPEALRIGELVGRVADGSVAEVILALPATVDGQTTAHYIADRLAKTNVP 120
Query: 170 ITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
+T LA G+P+G +LD+LDDGTI +A+R+R
Sbjct: 121 VTMLARGVPVGGDLDWLDDGTIAQALRARRP 151
>gi|283954827|ref|ZP_06372343.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 414]
gi|283793667|gb|EFC32420.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 414]
Length = 190
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R H+ + LA + N + C CG +
Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHICTNNQIDGMKLAHNIENAIRFIKPCEQCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D++RD +++ +VE D+ LE SK+ N Y VL D + E +
Sbjct: 66 ENEFCEICSDKERDKNILCIVESPKDILTLEESKSYNGFYFVL-------DELNEEKL-- 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L + I ELIFA++ +I T +I DK K +++ +++A GIP G L+ +D
Sbjct: 117 EKLKQIILKLNTSELIFALTHSINSDATIFFIEDKFKHLNLSFSKIAQGIPSGVNLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +A+ RT +
Sbjct: 177 LISLNKAMNFRTKI 190
>gi|152993460|ref|YP_001359181.1| recombination protein RecR [Sulfurovum sp. NBC37-1]
gi|151425321|dbj|BAF72824.1| DNA recombination protein RecR [Sulfurovum sp. NBC37-1]
Length = 189
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K + ENL++ P G +SA R H V + LA A+ N + CS
Sbjct: 2 KNYKIEAFENLVEAFGSFPSIGKKSAIRLAYHSVMEDGFAAMKLAHAIETAVNSIHKCSK 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C N+ + C+IC D RD + + +V+ D+ +E S + +Y+V+
Sbjct: 62 CHNMSEDELCSICSDPYRDTAKLCIVQSAKDILTIEESGQFDGVYYVISEV--------- 112
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
D+ L V+ + E+IFA +I T YI DKL+G+ + T++A G+P G E
Sbjct: 113 RDLDEAHLFY--AVEGVEEIIFAFPPSIATDTMILYIEDKLQGLPISFTKIAQGVPTGVE 170
Query: 183 LDYLDDGTIFEAIRSRTVL 201
L+ +D ++ A+ +R +
Sbjct: 171 LENIDIMSLSRALEARVKI 189
>gi|57167625|ref|ZP_00366765.1| recombination protein RecR [Campylobacter coli RM2228]
gi|305433130|ref|ZP_07402286.1| recombination protein R [Campylobacter coli JV20]
gi|57020747|gb|EAL57411.1| recombination protein RecR [Campylobacter coli RM2228]
gi|304443831|gb|EFM36488.1| recombination protein R [Campylobacter coli JV20]
Length = 191
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A++P G ++A R H+ + LA + N + C CG++
Sbjct: 7 EKFNELVESFAKLPTIGKKTAIRLAYHICTGNQLEGMKLAHNIENAIRFIKPCQQCGSLS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D +RD + + +V+ D+ +E SK+ LY VL D + E +
Sbjct: 67 ENELCEICTDDERDKNCLCIVQSPKDVLVIEESKSYGGLYFVL-------DELNDEKL-- 117
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L + I + +ELIFA + + YI D+LK ++++ +++A GIP G L+ +D
Sbjct: 118 AQLRQMILKLQSKELIFAFTHNLNSDAMIFYIEDRLKDLNLQFSKIAQGIPSGVNLENVD 177
Query: 188 DGTIFEAIRSRTV 200
++ +AI RT
Sbjct: 178 FISLNKAINFRTK 190
>gi|224372958|ref|YP_002607330.1| recombination protein RecR [Nautilia profundicola AmH]
gi|223589618|gb|ACM93354.1| recombination protein RecR [Nautilia profundicola AmH]
Length = 187
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
I LI+ +P G +SA R L + K + L A+ ++ + C ICGN
Sbjct: 5 HSINRLIEAFEELPSIGKKSATRLALSIAK-DKFKALKLINAIEDVVANIKECEICGNFS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD + +VE+ D+ +E S + N Y VL +D I
Sbjct: 64 EHEICDICASENRDK-TLAIVENSKDIMIIEESGSYNGYYFVL---------THIDDEVI 113
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q L E I+ K+I+E+IFA ++E + + YI DKLK ++++ T++A G+P G + +D
Sbjct: 114 QKLREIIKDKEIKEVIFAFPPSVESEARSLYIEDKLKDLNIEFTQIAQGVPTGVHFENVD 173
Query: 188 DGTIFEAIRSRTVL 201
++ +AI+ R L
Sbjct: 174 VNSLAKAIKLRFKL 187
>gi|261885550|ref|ZP_06009589.1| recombination protein RecR [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 189
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + K L+ +IPG G +SA + H+ + LA + + + C
Sbjct: 1 MPNQKLEK-FNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLNLAHTIEDAVRFLKHC 59
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S+CG + + C IC D RD + +VE D+ +E S ++N LY V
Sbjct: 60 SMCGGISENEICDICSDINRDKRSLCIVETPKDILPIEYSHSLNGLYFVFD--------- 110
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
+ + L I+ I+EL+FA++ +I YI DKLK DV T++A GIP G
Sbjct: 111 --DANKLDKLKSNIKENGIKELLFALTRSINSDGMMLYIEDKLKDFDVSFTKIAQGIPTG 168
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
L+ +D ++ +AI+ R L
Sbjct: 169 VSLENVDILSLTKAIKDRRSL 189
>gi|254431560|ref|ZP_05045263.1| recombination protein RecR [Cyanobium sp. PCC 7001]
gi|197626013|gb|EDY38572.1| recombination protein RecR [Cyanobium sp. PCC 7001]
Length = 145
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Query: 58 CLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117
C C ++ C IC +++R + VV D DL A+ER++ YHVLGG +SP+
Sbjct: 2 GQCQRCFHLSAEPLCEICRNEERRNGQLCVVADSRDLLAMERTREFRGGYHVLGGLISPM 61
Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
D IGPE + IQ L++R+ + E+I A++ ++EG TT+ Y+ LK ++R+AYG+
Sbjct: 62 DGIGPELLQIQPLVQRVAADGVEEVILALTPSVEGDTTSLYLARLLKPF-TTVSRIAYGL 120
Query: 178 PMGSELDYLDDGTIFEAIRSRTV 200
P+GSEL+Y D+ T+ A R
Sbjct: 121 PVGSELEYADEVTLARAFEGRRQ 143
>gi|255024678|ref|ZP_05296664.1| recombination protein RecR [Listeria monocytogenes FSL J1-208]
Length = 139
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
+ I LI ++PG GP+SA R +++ KE + A+A+ + + CS+CG+
Sbjct: 3 YPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI
Sbjct: 63 ITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122
Query: 126 GIQSLIERIEVKKIREL 142
I L++R++ I E+
Sbjct: 123 NIPDLLKRLQDDTIEEV 139
>gi|13357645|ref|NP_077919.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170762232|ref|YP_001752169.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508466|ref|ZP_02958003.1| recombination protein RecR [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|20139832|sp|Q9PR56|RECR_UREPA RecName: Full=Recombination protein recR
gi|189029381|sp|B1AI75|RECR_UREP2 RecName: Full=Recombination protein recR
gi|11277992|pir||H82935 recombinational DNA repair protein UU089 [imported] - Ureaplasma
urealyticum
gi|6899041|gb|AAF30494.1|AE002108_7 recombinational DNA repair protein [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827809|gb|ACA33071.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675882|gb|EDT87787.1| recombination protein RecR [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 201
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + E E L+ L +PG G ++A + L+++ ++ + L + + + C
Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N D C IC+++ RD + +++V DL +E + N LYH+ G +S +
Sbjct: 58 KYCANFTNKDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNV 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
E I+++ ER+ +E+I A S T +G+ TA YI+ L+ I D++I R+ +GIP+
Sbjct: 118 VIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPL 177
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
S +DY DD T+ +++ ++ +
Sbjct: 178 NSSIDYADDETLKQSLINKRKI 199
>gi|171920181|ref|ZP_02931568.1| recombination protein RecR [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701809|ref|ZP_02971483.1| recombination protein RecR [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|171902557|gb|EDT48846.1| recombination protein RecR [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701095|gb|EDU19377.1| recombination protein RecR [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 201
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + E E L+ L +PG G ++A + L+++ ++ + L + + + C
Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N D C IC+++ RD + +++V DL +E + N LYH+ G +S +
Sbjct: 58 KYCANFTNKDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNV 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
E I+++ ER+ +E+I A S T +G+ TA YI+ L+ I D++I R+ +GIP+
Sbjct: 118 VIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIKMLEDIKDLQIYRIGFGIPL 177
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
S +DY DD T+ +++ ++ +
Sbjct: 178 NSSIDYADDETLKQSLINKRKI 199
>gi|327398752|ref|YP_004339621.1| recombination protein RecR [Hippea maritima DSM 10411]
gi|327181381|gb|AEA33562.1| recombination protein RecR [Hippea maritima DSM 10411]
Length = 201
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 3/195 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K ++ L L IPG G ++A + L + K++ +++ + I KV C +C N+
Sbjct: 7 KLLDELSLYLKNIPGIGEKNASKYAFWLAEHKDK-ANSISKLLKEISEKVKSCRLCYNLT 65
Query: 68 --TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
C IC D+ RD + VVE + +L +E + N LY +LGG +SP+ I
Sbjct: 66 ANENGICDICSDKSRDHETVCVVETIENLLEIETANVYNGLYFILGGVISPIYGIDSIIK 125
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ RI ++ +ELI IS T EG+ T YI +KLK ++KIT++A G+P G++++Y
Sbjct: 126 RIDYLVSRILKEQKKELILVISPTTEGELTMQYIKEKLKPSNIKITKVAIGVPAGADINY 185
Query: 186 LDDGTIFEAIRSRTV 200
++ T+ EA + RTV
Sbjct: 186 INKKTLIEAFKMRTV 200
>gi|218507696|ref|ZP_03505574.1| recombination protein RecR [Rhizobium etli Brasil 5]
Length = 146
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 99/146 (67%), Positives = 119/146 (81%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C
Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I
Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAI 146
GP+D+ I+ LI RI IRELI A+
Sbjct: 121 GPDDLNIRGLIHRIGEGGIRELIIAV 146
>gi|154174630|ref|YP_001407798.1| recombination protein RecR [Campylobacter curvus 525.92]
gi|112802205|gb|EAT99549.1| recombination protein RecR [Campylobacter curvus 525.92]
Length = 190
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ ++PG G +SA R + + LA+ + + + C CG +
Sbjct: 6 EKFNELVDAFGKLPGVGKKSAARFAYFVSMQDSFAGLRLAQCIEDAARFIKRCERCGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD S+I +VE D+ E++ LY VL +D I
Sbjct: 66 ENEICDICADEARDKSMIAIVESPRDILVFEQNGIYEGLYFVLD---------EIDDGAI 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L IE+ K E+IFA + + Y+ DKL ++K +++A G+P G L+ +D
Sbjct: 117 NRLKSMIELNKATEIIFAFTPGLNTDALMLYVEDKLGMSELKFSKIAQGVPTGVSLENVD 176
Query: 188 DGTIFEAIRSRTV 200
++ +A+ SRT
Sbjct: 177 MLSLLKALESRTK 189
>gi|57242137|ref|ZP_00370077.1| recombination protein RecR [Campylobacter upsaliensis RM3195]
gi|57017329|gb|EAL54110.1| recombination protein RecR [Campylobacter upsaliensis RM3195]
Length = 192
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R L++ + L+ + N + C CG +
Sbjct: 7 EKFNELVESFANLPTIGKKTAIRLALYICMQNPLEGMKLSHNIENALRFIKSCKQCGALS 66
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D QRD ++I +VE+ D+ LE S N Y VL + +
Sbjct: 67 ENELCEICTDTQRDENLICLVENAKDILILEESGGYNGFYFVLNEL---------NEEKL 117
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L IE K +ELIFA++ ++ T +I + LK +++K++++A GIP G L+ +D
Sbjct: 118 SKLKAMIEKLKSKELIFALTHSVHSDATIFFIEENLKNLELKLSKIAQGIPSGVNLENVD 177
Query: 188 DGTIFEAIRSRTVL 201
++ A+ RT +
Sbjct: 178 FISLHRAMNFRTKI 191
>gi|315638146|ref|ZP_07893328.1| recombination protein R [Campylobacter upsaliensis JV21]
gi|315481682|gb|EFU72304.1| recombination protein R [Campylobacter upsaliensis JV21]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ A +P G ++A R L++ + L+ + N + C CG +
Sbjct: 24 EKFNELVESFANLPTIGKKTAIRLALYICMQNPLEGMKLSHNIENALRFIKSCKQCGALS 83
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D QRD ++I +VE+ D+ LE S N Y VL + +
Sbjct: 84 ENELCEICTDTQRDENLICLVENAKDILILEESGGYNGFYFVLNEL---------NEEKL 134
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L IE K +ELIFA++ ++ T +I + LK +++K++++A GIP G L+ +D
Sbjct: 135 SKLKAMIEKLKSKELIFALTHSVHSDATIFFIEENLKNLELKLSKIAQGIPSGVNLENVD 194
Query: 188 DGTIFEAIRSRTVL 201
++ A+ RT +
Sbjct: 195 FISLHRAMNFRTKI 208
>gi|171920724|ref|ZP_02931938.1| recombination protein RecR [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|171903469|gb|EDT49758.1| recombination protein RecR [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
Length = 201
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + E E L+ L +PG G ++A++ L+++ ++ + + + + + C
Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNAKKWAFFLLQQDQKYIDDFIKRIKDAKTNIIKC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N D C IC + RD + +++V DL +E + N LYH+ G +S +
Sbjct: 58 KYCSNFGNKDECDICSNDYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEVSLRKNV 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
E I+ + ER+ +E+I A S T +G+ TA YI+ L+ I +++I R+ +GIP+
Sbjct: 118 VIEHTNIKIIKERVLNGSFKEIIIATSYTHDGEVTADYIVKMLEDIKNIQIYRIGFGIPL 177
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
S +DY DD T+ ++I ++ +
Sbjct: 178 NSSIDYADDETLKQSIANKRKI 199
>gi|157164121|ref|YP_001466292.1| recombination protein RecR [Campylobacter concisus 13826]
gi|112800886|gb|EAT98230.1| recombination protein RecR [Campylobacter concisus 13826]
Length = 190
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L + A++PG G +SA R + + LA+ + + + C CG +
Sbjct: 6 EKFNELTESFAKLPGVGKKSAARFAYFVCMQDSFAGLRLAQNIEDAVRFIKRCERCGGLS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD+ VI++VE D+ E++ N LY VL +D I
Sbjct: 66 ENEICDICSDESRDSEVILLVESPKDILVFEQNGIYNGLYFVLD---------EIDDDTI 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L I+ +E++FA + + Y+ DKL ++ +++A G+P G L+ +D
Sbjct: 117 ERLRSAIKQNGSKEVVFAFTPGLNSDALMLYVEDKLGMSEISFSKIAQGVPTGVNLENVD 176
Query: 188 DGTIFEAIRSRTV 200
++ +A SRT
Sbjct: 177 MLSLLKAYESRTK 189
>gi|318040218|ref|ZP_07972174.1| recombination protein RecR [Synechococcus sp. CB0101]
Length = 145
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 57/144 (39%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
Query: 58 CLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117
C C ++ C IC +++R+ V+ VV D DL ALER++ YHVLGG +SP+
Sbjct: 2 GQCQRCYHLSADPLCEICRNEERNTGVLCVVADSRDLLALERTREFRGGYHVLGGLISPM 61
Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177
D +GPE + IQ L+ER++ + E+I A++ ++EG TT+ Y+ LK +++R+AYG+
Sbjct: 62 DGVGPELLQIQPLVERVDRDGVSEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGL 120
Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201
P+GSEL+Y D+ T+ A+ R +
Sbjct: 121 PVGSELEYADEVTLARALEGRRRM 144
>gi|296273166|ref|YP_003655797.1| recombination protein RecR [Arcobacter nitrofigilis DSM 7299]
gi|296097340|gb|ADG93290.1| recombination protein RecR [Arcobacter nitrofigilis DSM 7299]
Length = 190
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +L++ +P G +SA+R H++ +A ++ N + CS CG +
Sbjct: 6 NKFYDLVEAFENLPTIGKKSAQRLAYHIIMNDNYCGIKIAHSIENALKSIRKCSKCGCMS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC+D +R++S I VV+ D++ +E SK N Y V+ ++I +
Sbjct: 66 EHEICEICLDDERESSFICVVQSAKDIFTIEESKQFNGKYFVIS---------HLDEIVL 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
I I+ K+++++FAIS ++ +I DKLK D+ T++A G+P G L+ +D
Sbjct: 117 DQFITYIKTNKVKDILFAISPSLSNDAFILFIEDKLKEFDINFTKIAQGVPTGVSLENVD 176
Query: 188 DGTIFEAIRSRTVL 201
++ +AI+S+ ++
Sbjct: 177 ILSLAKAIQSKVLI 190
>gi|185178817|ref|ZP_02964608.1| recombination protein RecR [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188024394|ref|ZP_02997057.1| recombination protein RecR [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188518705|ref|ZP_03004130.1| recombination protein RecR [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|188524138|ref|ZP_03004210.1| recombination protein RecR [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195867497|ref|ZP_03079501.1| recombination protein RecR [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198273388|ref|ZP_03205924.1| recombination protein RecR [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209554293|ref|YP_002284514.1| recombination protein RecR [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550632|ref|ZP_03771581.1| recombination protein RecR [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551045|ref|ZP_03771991.1| recombination protein RecR [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|238058669|sp|B5ZAS4|RECR_UREU1 RecName: Full=Recombination protein recR
gi|184209448|gb|EDU06491.1| recombination protein RecR [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188018663|gb|EDU56703.1| recombination protein RecR [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188997707|gb|EDU66804.1| recombination protein RecR [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659812|gb|EDX53192.1| recombination protein RecR [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660973|gb|EDX54226.1| recombination protein RecR [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198249908|gb|EDY74688.1| recombination protein RecR [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209541794|gb|ACI60023.1| recombination protein RecR [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378860|gb|EEH01225.1| recombination protein RecR [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379786|gb|EEH02148.1| recombination protein RecR [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 201
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + E E L+ L +PG G ++A++ L+++ ++ + + + + + C
Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNAKKWAFFLLQQDQKYIDDFIKRIKDAKTNIIKC 57
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
C N D C IC + RD + +++V DL +E + N LYH+ G +S +
Sbjct: 58 KYCSNFGNKDECDICSNDYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEVSLRKNV 117
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179
E I+ + ER+ +E+I A S T +G+ TA YI+ L+ I D++I R+ +GIP+
Sbjct: 118 VIEHTNIKIIKERVLNGSFKEIIIATSYTHDGEVTADYIVKMLEDIKDIQIYRIGFGIPL 177
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
S +DY DD T+ ++I ++ +
Sbjct: 178 NSSIDYADDETLKQSIANKRKI 199
>gi|254360628|ref|ZP_04976777.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
gi|153091168|gb|EDN73173.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
Length = 147
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Query: 58 CLCSICGNVDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116
C C + C IC + +R + + VVE D+ A+E++ + Y VL G LSP
Sbjct: 1 GHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSP 60
Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176
+D IGP +IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G
Sbjct: 61 IDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEMCRMYNVKATRIAHG 120
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+P+G L+ +D T+ + R +
Sbjct: 121 VPVGGSLEMVDGTTLSHSFAGRRDI 145
>gi|149193701|ref|ZP_01870799.1| recombination protein RecR [Caminibacter mediatlanticus TB-2]
gi|149135654|gb|EDM24132.1| recombination protein RecR [Caminibacter mediatlanticus TB-2]
Length = 189
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I+NLI+IL +P G +SA R L L K + LA A+ + +KV C CGN
Sbjct: 5 KSIQNLIEILEELPSIGKKSATRLALSLAK-DKFKALKLANAIEEVVSKVSECKECGNFS 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC + RD + +VE D+ +E S N Y VL +D +
Sbjct: 64 EHEICEICDNPNRDK-TLAIVETPKDIMIIEESGVYNGYYFVLN---------HLDDENL 113
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
Q + E I+ K I+E+IFA +IE + Y+ DKLK ++V+ +++A G+P G + +D
Sbjct: 114 QKIREIIKNKNIKEIIFAFPPSIESEARCLYLEDKLKDLEVEFSQIAQGVPTGVHFENVD 173
Query: 188 DGTIFEAIRSRTVL 201
++ +AI+ R +
Sbjct: 174 INSLAKAIKLRFKI 187
>gi|153803673|ref|ZP_01958259.1| recombination protein RecR [Vibrio cholerae MZO-3]
gi|124120792|gb|EAY39535.1| recombination protein RecR [Vibrio cholerae MZO-3]
Length = 143
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C
Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQ 61
Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+
Sbjct: 62 DVCHICRNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121
Query: 129 SLIERIEVKKIRELIFAISAT 149
+L R++ I E+I A + T
Sbjct: 122 TLDYRLQRGDISEVILATNPT 142
>gi|319956222|ref|YP_004167485.1| DNA replication and repair protein recr [Nitratifractor salsuginis
DSM 16511]
gi|319418626|gb|ADV45736.1| DNA replication and repair protein RecR [Nitratifractor salsuginis
DSM 16511]
Length = 189
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
K+ + E L++ +P G ++A R HLV ++ LA+A+ + + + C
Sbjct: 2 KRYRVESFERLVEAFNALPTIGRKTATRLAYHLVTEQGFSGLKLAQAIEDAVSSLRTCRR 61
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + + C IC D RD S + +V+ D++ +E S LY++L
Sbjct: 62 CHAICEDELCGICSDPGRDRSKLCIVQSAKDIFTIEESGQYEGLYYILSS---------I 112
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182
E++ L E + + + E+IFA I T YI D+L + T++A G+P G E
Sbjct: 113 EELDESHLHEIV--EGVEEVIFAFPPGIATDTMILYIEDRLSDRGLVFTKIAQGVPTGVE 170
Query: 183 LDYLDDGTIFEAIRSR 198
LD +D ++ A+ R
Sbjct: 171 LDNIDLLSLSRALEDR 186
>gi|268679206|ref|YP_003303637.1| recombination protein RecR [Sulfurospirillum deleyianum DSM 6946]
gi|268617237|gb|ACZ11602.1| recombination protein RecR [Sulfurospirillum deleyianum DSM 6946]
Length = 189
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L++ ++P G +SA R HLV L L+ + + + C CG +
Sbjct: 6 EKFNKLVEAFEKLPTVGRKSALRFAYHLVLNDTSLAMKLSHTIESAIKSIRKCERCGALS 65
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC+D++RD + + VVE D++ LE K + Y VL ++ +
Sbjct: 66 EHELCDICVDERRDHAKLCVVESAKDIFILEEHKLFDGNYFVLASL---------DEEIL 116
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L RI+ ++E+IFA++ ++ ++ D+LK + T++A G+P G L+ +D
Sbjct: 117 ERLENRIKEG-VQEVIFALTPSLSTDALILFVEDRLKAYALHFTKIAQGVPTGVHLENVD 175
Query: 188 DGTIFEAIRSRTV 200
++ +A+ +RT
Sbjct: 176 MLSLSKALEARTK 188
>gi|157737536|ref|YP_001490219.1| recombination protein RecR [Arcobacter butzleri RM4018]
gi|315637320|ref|ZP_07892538.1| recombination protein R [Arcobacter butzleri JV22]
gi|157699390|gb|ABV67550.1| recombination protein RecR [Arcobacter butzleri RM4018]
gi|315478363|gb|EFU69078.1| recombination protein R [Arcobacter butzleri JV22]
Length = 190
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M K + ++ L++ +P G +SA R H+V +A ++ N + C
Sbjct: 1 MNKGL--EKFYELVEAFESLPTIGKKSALRLAYHIVMNDNYCGIKIAHSIENALKNITKC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
S CG++ + C C+D+ RD + +V+ D++ +E S + Y V+
Sbjct: 59 SRCGSMSEHEICEFCLDENRDNEKLCIVQSAKDIFVIEDSNQFDGRYFVIEEL------- 111
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
+ + SL I ++ ++FAI+ +I +I DKLK D+K T++A G+P G
Sbjct: 112 --DQDVLDSLQRFILNNGVKTILFAITPSIANDAFILFIEDKLKDFDIKFTKIAQGVPTG 169
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
L+ +D ++ +AI+S+ +
Sbjct: 170 VSLENVDILSLSKAIQSKVEI 190
>gi|32267017|ref|NP_861049.1| recombination protein RecR [Helicobacter hepaticus ATCC 51449]
gi|32263069|gb|AAP78115.1| recombination protein RecR [Helicobacter hepaticus ATCC 51449]
Length = 195
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + K + K LI L ++P G +SA++ L + + L +A A+ N V
Sbjct: 1 MNQYKSSLKAFSELISTLEKLPAIGKKSAQKMAYALCMENKFLGLNIAHAIENAALLVQK 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C + ++ C IC+D R+ + +V + D++ LE Y VL
Sbjct: 61 CHKCFGISESEICDICLDSSRENGELCIVANPRDIFTLEDMGEFKGRYFVLDSQ------ 114
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E I L +RI+ + +RE+IFA+S ++ + YI DK+K + + +++A G+P
Sbjct: 115 GDLEQIDFTLLNQRIDTESVREIIFALSPSLANEAIMLYIEDKIK-MPLHFSKIAQGVPT 173
Query: 180 GSELDYLDDGTIFEAIRSRTVL 201
G LD +D ++ A+ R L
Sbjct: 174 GIGLDAIDQLSLSRAMSLRVKL 195
>gi|154148981|ref|YP_001406701.1| recombination protein RecR [Campylobacter hominis ATCC BAA-381]
gi|153804990|gb|ABS51997.1| recombination protein RecR [Campylobacter hominis ATCC BAA-381]
Length = 189
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ + L+ ++PG G +SA R H+ L LA ++ N + C +CG +
Sbjct: 6 KFDELVATFEKLPGVGKKSALRYAYHISINDPFLGLNLANSIENAVRNLRRCEVCGAICE 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C +C D RD I +VE D+ E + + LY VL S + I
Sbjct: 66 DEICEVCCDTSRDREKICIVESPKDILIFEENAIFDGLYFVLDSSGDEI---------IT 116
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L IE+ ++ELIFA++ + Y+ DK+ ++K +++A GIP G +D +D
Sbjct: 117 KLQRMIELNGVKELIFAMTPGVNSDMLMLYVEDKISIPNLKFSKIAQGIPTGVSVDSIDF 176
Query: 189 GTIFEAIRSR 198
++ +A++ R
Sbjct: 177 ISLSKALKDR 186
>gi|15645541|ref|NP_207717.1| recombination protein RecR [Helicobacter pylori 26695]
gi|207091729|ref|ZP_03239516.1| recombination protein RecR [Helicobacter pylori HPKX_438_AG0C1]
gi|210135115|ref|YP_002301554.1| recombination protein RecR [Helicobacter pylori P12]
gi|3024518|sp|P56214|RECR_HELPY RecName: Full=Recombination protein recR
gi|238058665|sp|B6JME6|RECR_HELP2 RecName: Full=Recombination protein recR
gi|2314062|gb|AAD07970.1| recombinational DNA repair protein (recR) [Helicobacter pylori
26695]
gi|210133083|gb|ACJ08074.1| recombinational DNA repair protein [Helicobacter pylori P12]
gi|317009582|gb|ADU80162.1| recombination protein RecR [Helicobacter pylori India7]
gi|317012734|gb|ADU83342.1| recombination protein RecR [Helicobacter pylori Lithuania75]
Length = 193
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CS C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CSSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|317011133|gb|ADU84880.1| recombination protein RecR [Helicobacter pylori SouthAfrica7]
Length = 193
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L L A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPFLALKLTHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K YHVL
Sbjct: 61 CASCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ +KI+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IENVDFNALEKRLVKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCRLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|109947625|ref|YP_664853.1| recombination protein RecR [Helicobacter acinonychis str. Sheeba]
gi|123066196|sp|Q17WX2|RECR_HELAH RecName: Full=Recombination protein recR
gi|109714846|emb|CAJ99854.1| recombination protein [Helicobacter acinonychis str. Sheeba]
Length = 193
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L L A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K YHVL
Sbjct: 61 CTSCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ +KI+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IENVDFNALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPA 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|257459385|ref|ZP_05624496.1| recombination protein RecR [Campylobacter gracilis RM3268]
gi|257443238|gb|EEV18370.1| recombination protein RecR [Campylobacter gracilis RM3268]
Length = 189
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
E L+ ++PG G +SA R ++ + L LA + + C ICG V
Sbjct: 7 FEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRICGAVCEG 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C C D +R++ I +VE+ D++ LE +K N Y VL + ++ I +
Sbjct: 67 EICEYCADDERESDKICIVENPKDIFILESNKIYNGRYFVLDAA---------DEDKIAA 117
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L E + RELIFA++ I Y+ DKL + +K T+LA G+P G LD +D
Sbjct: 118 LREMVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVSLDNVDML 177
Query: 190 TIFEAIRSRTVL 201
++ +AI RT +
Sbjct: 178 SLIKAINGRTDI 189
>gi|254458961|ref|ZP_05072384.1| recombination protein RecR [Campylobacterales bacterium GD 1]
gi|207084232|gb|EDZ61521.1| recombination protein RecR [Campylobacterales bacterium GD 1]
Length = 189
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
+ L+ L +P G +SA R H+V K + ++ + + + C++CG +
Sbjct: 7 KFNRLVDALQELPTIGKKSATRLAYHMVMKDSYVGMKISHTIEDALGSLKKCTVCGGMSE 66
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC D++RD++V+ ++E+ D+ LE + + Y VL E++ I
Sbjct: 67 DELCFICSDERRDSTVLCIIENAKDILLLEENGLFDGRYFVLDSL---------EELSIS 117
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L++ +E + E++FA++ +I YI DKL G + +++A G+P G L+ +D
Sbjct: 118 HLVKIVESG-VNEVLFALTPSISNDAVILYIEDKLSGHKLSFSKIAQGVPTGVSLENIDI 176
Query: 189 GTIFEAIRSRTV 200
++ A+ R
Sbjct: 177 LSLTRALEDRVK 188
>gi|208434828|ref|YP_002266494.1| recombinational DNA repair protein [Helicobacter pylori G27]
gi|238058666|sp|B5Z7S9|RECR_HELPG RecName: Full=Recombination protein recR
gi|208432757|gb|ACI27628.1| recombinational DNA repair protein [Helicobacter pylori G27]
Length = 193
Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
CS C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CSSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQRFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|261839711|gb|ACX99476.1| recombination protein RecR [Helicobacter pylori 52]
gi|317177712|dbj|BAJ55501.1| recombination protein RecR [Helicobacter pylori F16]
gi|317178725|dbj|BAJ56513.1| recombination protein RecR [Helicobacter pylori F30]
Length = 193
Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALRITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|308062241|gb|ADO04129.1| recombination protein RecR [Helicobacter pylori Cuz20]
Length = 193
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKR 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|33322897|gb|AAQ07185.1|AF496493_1 recombination protein M [Lactobacillus delbrueckii subsp. lactis]
Length = 131
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 77/130 (59%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN
Sbjct: 2 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 61
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I
Sbjct: 62 ITEQDPCAICSNPARDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 121
Query: 126 GIQSLIERIE 135
I+SLI R++
Sbjct: 122 NIKSLIVRLQ 131
>gi|188527748|ref|YP_001910435.1| recombination protein RecR [Helicobacter pylori Shi470]
gi|238691933|sp|B2UU73|RECR_HELPS RecName: Full=Recombination protein recR
gi|188143988|gb|ACD48405.1| recombination protein RecR [Helicobacter pylori Shi470]
Length = 193
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKR 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|298736120|ref|YP_003728645.1| recombination protein recr [Helicobacter pylori B8]
gi|298355309|emb|CBI66181.1| Recombination protein recR [Helicobacter pylori B8]
gi|317180227|dbj|BAJ58013.1| recombination protein RecR [Helicobacter pylori F32]
Length = 193
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|78777482|ref|YP_393797.1| recombination protein RecR [Sulfurimonas denitrificans DSM 1251]
gi|78498022|gb|ABB44562.1| DNA replication and repair protein RecR [Sulfurimonas denitrificans
DSM 1251]
Length = 189
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + + ++ L++ +P G +SA R H+V K + +A A+ + C
Sbjct: 1 MSESL--EKFNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEEALGSIKQC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+ CG + + C IC D+ RD +++ +VE+ D+ LE ++ + Y VL
Sbjct: 59 AACGGMSEDELCFICCDESRDETLLCIVENAKDILLLEENRLFDGRYFVLDSL------- 111
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E+ + L + + E++FA++ +I YI DKL + +++A G+P G
Sbjct: 112 --ENFNLSGLES-LVKNGVEEIVFALTPSIANDAVILYIEDKLSDFTINFSKIAQGVPTG 168
Query: 181 SELDYLDDGTIFEAIRSRTV 200
L+ +D ++ A+ R
Sbjct: 169 VSLENIDLLSLSRALIDRVK 188
>gi|217033994|ref|ZP_03439417.1| hypothetical protein HP9810_883g64 [Helicobacter pylori 98-10]
gi|308183077|ref|YP_003927204.1| recombination protein RecR [Helicobacter pylori PeCan4]
gi|216943627|gb|EEC23075.1| hypothetical protein HP9810_883g64 [Helicobacter pylori 98-10]
gi|297380122|gb|ADI35009.1| recombination protein RecR [Helicobacter pylori v225d]
gi|308063754|gb|ADO05641.1| recombination protein RecR [Helicobacter pylori Sat464]
gi|308065262|gb|ADO07154.1| recombination protein RecR [Helicobacter pylori PeCan4]
gi|317182224|dbj|BAJ60008.1| recombination protein RecR [Helicobacter pylori F57]
gi|332673764|gb|AEE70581.1| recombination protein R [Helicobacter pylori 83]
Length = 193
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|315586870|gb|ADU41251.1| recombination protein R [Helicobacter pylori 35A]
Length = 193
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNAISESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIKENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|34557110|ref|NP_906925.1| recombination protein RecR [Wolinella succinogenes DSM 1740]
gi|34482825|emb|CAE09825.1| RECOMBINATION PROTEIN [Wolinella succinogenes]
Length = 190
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M+K + + L++ L ++P G +SA R L +++ LA A+ K+ C
Sbjct: 1 MKKGM--ESFFTLVESLEKLPSVGRKSALRLGYFLAIEEKFSALKLAHAIEEAVVKIKRC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CG + + C IC D+ R + +V D++ LE SK Y V+
Sbjct: 59 ERCGALSEHELCEICSDETRLNGQLCIVTHPKDIFILEESKHFEGRYFVIDSL------- 111
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
ED L I KI E+IFA S ++ + Y+ DKL+ + V +++A G+P G
Sbjct: 112 --EDCDFTLLRSLIVSLKITEVIFAFSPSLSNDSIIFYVEDKLQDLGVSFSKIAQGVPTG 169
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
L+ +D ++ A SR L
Sbjct: 170 VSLENIDQLSLTRAFDSRIKL 190
>gi|254779526|ref|YP_003057632.1| recombination protein RecR [Helicobacter pylori B38]
gi|254001438|emb|CAX29433.1| Recombination protein RecR [Helicobacter pylori B38]
Length = 193
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CVSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|261838299|gb|ACX98065.1| recombinational DNA repair protein [Helicobacter pylori 51]
Length = 193
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALRITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|307721329|ref|YP_003892469.1| DNA replication and repair protein RecR [Sulfurimonas autotrophica
DSM 16294]
gi|306979422|gb|ADN09457.1| DNA replication and repair protein RecR [Sulfurimonas autotrophica
DSM 16294]
Length = 189
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + ++ L++ L +P G +SA R +++ +A A+ + + C
Sbjct: 1 MNNSL--EKFNRLVEALGELPSIGKKSATRLAYYMIMNDTFAGMKIAHAIEDALGSLKKC 58
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
CG + + C IC D+ RDAS++ +VE+ D+ LE + + Y VL
Sbjct: 59 KECGGMSEDELCYICCDEMRDASLLCIVENAKDILLLEENGLFDGKYFVLESL------- 111
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E++ + L E I + E++FA++ +I YI DKL D+ +++A G+P G
Sbjct: 112 --EELSMSHL-ETIVQNGVSEVLFALTPSIANDAVILYIEDKLGIYDLNFSKIAQGVPTG 168
Query: 181 SELDYLDDGTIFEAIRSR 198
L+ +D ++ A+ R
Sbjct: 169 VSLENIDLLSLTRALEDR 186
>gi|15828522|ref|NP_325882.1| recombination protein RecR [Mycoplasma pulmonis UAB CTIP]
gi|20139646|sp|Q98RF8|RECR_MYCPU RecName: Full=Recombination protein recR
gi|14089464|emb|CAC13224.1| RECOMBINATION PROTEIN RECR [Mycoplasma pulmonis]
Length = 191
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + I+NLI L ++PG G + A + + L+K+ E + + ++ ++ + C C
Sbjct: 1 MKNQYIDNLILNLKKLPGVGTKQAEKISFFLLKQNENEVEQIINSIVDLKKNIKECQNCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + + C C+D+ R+ +++ E +D E+ Y ++ + + E
Sbjct: 61 FLQSNNICHFCMDKSRNK-QLMIFETTSDALKFEKLGIYRGKYFIIKNLIENVKN-ANEP 118
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
L+ E+I A++ TIEGQ T++YI L+ + +K+T+LA G+P+ S++D
Sbjct: 119 KWKDKLL--HYASNFEEIIIALNPTIEGQITSNYIKVILEEVALKVTKLAQGLPINSQID 176
Query: 185 YLDDGTIFEAIRSRT 199
Y+D T+ + +R
Sbjct: 177 YIDPITLNLSFENRK 191
>gi|222823521|ref|YP_002575095.1| recombination protein RecR [Campylobacter lari RM2100]
gi|222538743|gb|ACM63844.1| recombination protein RecR [Campylobacter lari RM2100]
Length = 190
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++ L+ + +P G +SA R H+ K L LA + + C+ CG +
Sbjct: 5 EKFNELVSAFSALPTIGKKSALRLAYHVCIKDPLLGSKLAYHIEESIRMIKKCTQCGALS 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C +C + +R+ ++I +V+D D+ LE S + + LY VL + I
Sbjct: 65 ENELCEVCSNIERNHNIICIVQDSKDVLVLEDSGSYDGLYFVLD---------DISEENI 115
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L IE K E+ FA + + ++ +KLK +++ +++A GIP G L+ +D
Sbjct: 116 IKLRSMIEHNKTTEIFFAFTQGLNSDAIVFFVEEKLKDLNLSFSQIAQGIPSGVSLENVD 175
Query: 188 DGTIFEAIRSRTVL 201
++ +AI RT L
Sbjct: 176 FISLHKAINHRTRL 189
>gi|307637615|gb|ADN80065.1| Recombination protein [Helicobacter pylori 908]
gi|325996209|gb|ADZ51614.1| Recombination protein [Helicobacter pylori 2018]
gi|325997803|gb|ADZ50011.1| Recombination protein [Helicobacter pylori 2017]
Length = 193
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CTSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|108563331|ref|YP_627647.1| recombination protein RecR [Helicobacter pylori HPAG1]
gi|122386389|sp|Q1CSU9|RECR_HELPH RecName: Full=Recombination protein recR
gi|107837104|gb|ABF84973.1| recombinational DNA repair protein [Helicobacter pylori HPAG1]
Length = 193
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CTSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|224417864|ref|ZP_03655870.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491]
gi|253827203|ref|ZP_04870088.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491]
gi|313141407|ref|ZP_07803600.1| recombination protein [Helicobacter canadensis MIT 98-5491]
gi|253510609|gb|EES89268.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491]
gi|313130438|gb|EFR48055.1| recombination protein [Helicobacter canadensis MIT 98-5491]
Length = 190
Score = 200 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + L++ L ++P G +SA R L + + +A + + ++ +C C
Sbjct: 2 KSLPESFVKLVESLEKLPSIGKKSAMRLAYFLAFEDKFSALQIAHNIEHCMQELRICEEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ C IC + R+ + ++ D++ LE S + Y V+ E
Sbjct: 62 FGISKEPVCEICSNAMRNNGELCILTSPKDIFLLEESGEFHGKYFVITSL---------E 112
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L +I K+ E+IFA+S +++ + Y+ DKL +D++ T++A G+P G L
Sbjct: 113 ALNLKLLENKIIKDKVTEVIFALSPSLKSDSLMLYLEDKLSHLDLQFTKIAQGVPTGVSL 172
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D +I A++SR +
Sbjct: 173 ENIDQLSIIRALQSRVKI 190
>gi|317014334|gb|ADU81770.1| recombination protein RecR [Helicobacter pylori Gambia94/24]
Length = 193
Score = 200 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLVGENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|224438029|ref|ZP_03658968.1| recombination protein RecR [Helicobacter cinaedi CCUG 18818]
gi|313144474|ref|ZP_07806667.1| recombination protein recR [Helicobacter cinaedi CCUG 18818]
gi|313129505|gb|EFR47122.1| recombination protein recR [Helicobacter cinaedi CCUG 18818]
Length = 199
Score = 200 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + + +LI L ++P G +SA++ L + + L +A A+ N V
Sbjct: 1 MNSYKSSLRAFADLIAALEKLPTIGKKSAQKMAYSLCVENKFLGLNIAHAIENAALVVKK 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC+D R + +V + D++ +E Y VL
Sbjct: 61 CNKCLGLSESEICEICLDDTRQNGELCIVANSRDIFTIEEMGEFQGRYFVLDSQ------ 114
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI---DVKITRLAYG 176
E I L RI+ + I E+IFA++ ++ + YI DK+K ++ +++A G
Sbjct: 115 QDLEQIDFSLLNHRIQAESIHEIIFALTPSLANEAIMLYIEDKIKPPLDTPLQFSKIAQG 174
Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201
+P G LD +D ++ A+ SR L
Sbjct: 175 VPTGIGLDSIDQLSLLAALNSRVKL 199
>gi|237752563|ref|ZP_04583043.1| recombination protein RecR [Helicobacter winghamensis ATCC BAA-430]
gi|229376052|gb|EEO26143.1| recombination protein RecR [Helicobacter winghamensis ATCC BAA-430]
Length = 190
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + L++ L RIP G +SA R L + + +A + ++ C C
Sbjct: 2 KSYPESFAKLVESLERIPSVGRKSAMRLAYFLAFEDKFSALQVAHNIECCVQELRTCEEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + C IC+D R+ + +V + +++ LE S Y VL +
Sbjct: 62 GGITNQAVCEICLDATRNNGELCIVANPREIFLLEESGEFFGKYFVLDSL---------D 112
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ ++ L + I E+IFA S ++ + Y+ DKL+ ++ T++A GIP G L
Sbjct: 113 KLNLEQLERSVTKFGITEIIFAFSPSLGSDSIMLYLEDKLENFGLRFTKIAQGIPTGVSL 172
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D +I A++SR +
Sbjct: 173 ENVDQLSIIRALQSRVKI 190
>gi|308184709|ref|YP_003928842.1| recombination protein RecR [Helicobacter pylori SJM180]
gi|308060629|gb|ADO02525.1| recombination protein RecR [Helicobacter pylori SJM180]
Length = 193
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + ++ C IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
E++ +L +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P
Sbjct: 114 --IEEVDFNALEKRLIGEDIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|260654559|ref|ZP_05860049.1| recombination protein RecR [Jonquetella anthropi E3_33 E1]
gi|260630575|gb|EEX48769.1| recombination protein RecR [Jonquetella anthropi E3_33 E1]
Length = 175
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
++++ + +A+A+ + V CS CGN+ T PC IC D R+ ++ VVE
Sbjct: 1 MAFFVLQQPQSYAKDMADALNALKRDVATCSRCGNLTVTQPCPICSDPMRNRHLLCVVES 60
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLD---RIGPEDIGIQSLIERIEVKKIRELIFAIS 147
+ DL ++E S N LY L S+SP+D I P+ I+ L I + I E+I A +
Sbjct: 61 LEDLTSIELSGLFNGLYFNLATSVSPMDDRENIPPDV--IERLRALIAQEPIEEIIIATN 118
Query: 148 ATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
+EG T + ++D L + V +RLAYG+P+G +++ D T+ A+ SR
Sbjct: 119 PRVEGDMTFYALLDALADLPVTKSRLAYGLPVGGSIEFADRVTLHAALESRRP 171
>gi|294660557|ref|NP_853381.2| Recombination protein RecR [Mycoplasma gallisepticum str. R(low)]
gi|284812220|gb|AAP56949.2| Recombination protein recR [Mycoplasma gallisepticum str. R(low)]
gi|284930877|gb|ADC30816.1| Recombination protein recR [Mycoplasma gallisepticum str. R(high)]
Length = 206
Score = 197 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 106/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M + E NL++ ++ +P + A++ T +L+ K ++ + L + + + +C
Sbjct: 1 MTSDLDLNEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDLIDVLKRAKLSIKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C C+IC D+ R+ + + +V DL +E S+A + Y +L +S ++
Sbjct: 61 EMCQGWSNRSICSICSDESRNNNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKR 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E+I L++ I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P
Sbjct: 121 IIEEINFDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S +DY D ++ A ++ ++
Sbjct: 181 SSIDYADSFSLKGAFENKQLI 201
>gi|284931633|gb|ADC31571.1| Recombination protein recR [Mycoplasma gallisepticum str. F]
Length = 206
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 106/201 (52%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
M I E NL++ ++ +P + A++ T +L+ K ++ + + + + + +C
Sbjct: 1 MASDIDLNEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDMIDVLKRAKLSIKIC 60
Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120
+C C+IC D+ R+ + + +V DL +E S+A + Y +L +S ++
Sbjct: 61 EMCQGWSNRSICSICSDESRNKNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKR 120
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
E+I L++ I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P
Sbjct: 121 IIEEINFDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYN 180
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
S +DY D ++ A ++ ++
Sbjct: 181 SSIDYADSFSLKGAFENKQLI 201
>gi|256004181|ref|ZP_05429165.1| Zinc finger C4-type, RecR [Clostridium thermocellum DSM 2360]
gi|255991929|gb|EEU02027.1| Zinc finger C4-type, RecR [Clostridium thermocellum DSM 2360]
Length = 122
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 72/120 (60%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
I LI+ ++PG G ++A+R +++ ++ + LA A+ K CS+CG
Sbjct: 3 FYAAPIARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSVCG 62
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ TD C +C ++RD+SVI VVED D+ A+E+ + LYHVL G++SP+ IGPED
Sbjct: 63 NLTDTDVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPED 122
>gi|291277441|ref|YP_003517213.1| recombination protein [Helicobacter mustelae 12198]
gi|290964635|emb|CBG40489.1| recombination protein [Helicobacter mustelae 12198]
Length = 193
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ L++ L +IP G +SA + + + + L +A + N + CS+C +
Sbjct: 9 RHFNALLESLEQIPAIGKKSALKIAYAISVENKFLGLKIAHCIENAISHARNCSLCNALS 68
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C IC D+ RD+S + +V D++ +E + LY V+ P+ +
Sbjct: 69 ENELCDICSDENRDSSQLCMVLHSKDIFTIEETGDYKGLYFVI---------QDPKALDF 119
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
L ++I + RE+IFA S T+ YI DKL+ +D+ +++A G+P G LD +D
Sbjct: 120 SRLQKQILDHQTREIIFAFSPTLANDAIMLYIEDKLQHLDLSFSKIAQGVPTGIGLDNVD 179
Query: 188 DGTIFEAIRSRTVL 201
++ +AI RT +
Sbjct: 180 QLSLSKAILWRTKI 193
>gi|256384237|gb|ACU78807.1| DNA repair protein RecM [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256385070|gb|ACU79639.1| DNA repair protein RecM [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455620|gb|ADH21855.1| DNA repair protein RecM [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 196
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +I+ + G +++ R + L+ K++ L + + + C ICG
Sbjct: 1 MLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LDQFIDQLNKAKQLISTCKICG 59
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ D C +C + R+ ++I +V + D +E + +YH+L G ++ I +
Sbjct: 60 YLSENDKCLVCSLENRNQNIICIVSTILDAKNIENTNKYKGVYHILNGEINLNKNITLDK 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I S+ +RI E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LD
Sbjct: 120 LNISSIFKRINDN--TEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLD 177
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D+ T+ A +R
Sbjct: 178 YMDEFTLQSAFLNRKK 193
>gi|331703063|ref|YP_004399750.1| Recombination protein [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328801618|emb|CBW53771.1| Recombination protein [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 199
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K+ + +I+ + G +++ R + L+ K++ L + + + C IC
Sbjct: 3 KMLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LDQFIDQLNKAKQLISTCKIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
G + + C +C R+ + I +V + D +E + +YH+L G ++ I +
Sbjct: 62 GYLSENNKCLVCSLDNRNQNTICIVSTILDAKNIENTNKYKGVYHILNGEINLNKNITFD 121
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ I S+ +RI E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ L
Sbjct: 122 KLNISSIFKRINDN--TEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASL 179
Query: 184 DYLDDGTIFEAIRSRTV 200
DY+D+ T+ A +R
Sbjct: 180 DYMDEFTLQSAFLNRKK 196
>gi|50365492|ref|YP_053917.1| recombination protein [Mesoplasma florum L1]
gi|50364048|gb|AAT76033.1| recombination protein [Mesoplasma florum L1]
Length = 196
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD 81
G +++ R +L+ + L ++ + I + +C IC + C IC D+ R+
Sbjct: 18 GLTKKTSERLVNNLII-DKFALDNFSKQLNFIKDNFSICPICNYYQIKNECLICSDETRN 76
Query: 82 ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRE 141
+VI VV D+ +E+ LYHVLG ++ + P +I +SL+ RIE E
Sbjct: 77 QNVICVVASQLDVNNIEKINKYKGLYHVLGSEINLNKKRSPSEINFESLLSRIEKN--TE 134
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
LI A++AT EG+ T +YI K +++ ITR+A GIPMG LDY+D+ T+ A ++R
Sbjct: 135 LILALNATFEGELTTNYIYQLTKNMNINITRIAKGIPMGGSLDYMDETTLESAFKNRKK 193
>gi|47458910|ref|YP_015772.1| recombination protein RecR [Mycoplasma mobile 163K]
gi|47458238|gb|AAT27561.1| recombination protein [Mycoplasma mobile 163K]
Length = 196
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K ENL+ L +PG + A + + ++++ K+ +L L +A + + C+ C
Sbjct: 1 MNNKTFENLVLSLKELPGISKKQAEKISFYIIQSKKDVLNNLIDAFQKAKSNLVKCNNCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C+ICID+ RD ++VVE ++ E + + Y V+ + D
Sbjct: 61 LISEHQLCSICIDKSRDNK-LMVVESSLEVNKFEDLQIYSGKYFVVDSLIKNFDDKSTYF 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182
+ + + E+I A+S T+EG+ +A YI + + K ++KI++LA G+P+GS+
Sbjct: 120 ETYNKIFKILPNAD--EVILALSPTLEGEVSAIYIKNLINEKFPNLKISQLANGLPVGSQ 177
Query: 183 LDYLDDGTIFEAIRSRT 199
++Y+D T+ A ++R
Sbjct: 178 VEYIDSLTLNFAFKNRK 194
>gi|15611926|ref|NP_223577.1| recombination protein RecR [Helicobacter pylori J99]
gi|6685855|sp|Q9ZKS6|RECR_HELPJ RecName: Full=Recombination protein recR
gi|4155437|gb|AAD06442.1| RECOMBINATION PROTEIN [Helicobacter pylori J99]
Length = 193
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M K + NL+ L +IP G +SA + HL + L + A+ N +
Sbjct: 1 MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALRNALENLKT 60
Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119
C+ C + T+ IC D+ R S + +V D++ LE K Y+VL
Sbjct: 61 CASCNALSETEVSEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS------- 113
Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179
ED+ +L +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P
Sbjct: 114 --IEDVDFNALEKRLIGENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPT 171
Query: 180 GSELDYLDDGTIFEAIRSR 198
G + +D ++ A SR
Sbjct: 172 GVNFENIDSVSLSRAFNSR 190
>gi|289678893|ref|ZP_06499783.1| recombination protein RecR [Pseudomonas syringae pv. syringae FF5]
Length = 138
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
+ + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I
Sbjct: 1 MTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 59
Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
GI L+ER+ + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 60 GIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 119
Query: 185 YLDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 120 LVDGGTLAHSFAGRKPI 136
>gi|313668352|ref|YP_004048636.1| recombination protein [Neisseria lactamica ST-640]
gi|313005814|emb|CBN87268.1| putative recombination protein [Neisseria lactamica 020-06]
Length = 172
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 89/167 (53%)
Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADL 94
+++ K + L +A+ +V C+ C C IC D+ RD ++VV AD+
Sbjct: 1 MLQHKRKEAEKLVDALQTALKQVNHCARCNTFCEGGLCDICADETRDGRRLMVVHMPADV 60
Query: 95 WALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQT 154
+E + + LY VL G ++ + I + L +R+ ++ E+I A + T EG
Sbjct: 61 SNMEAANCHDGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNA 120
Query: 155 TAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
TA+ + + K + K++RL+ GIP+G EL+Y+D GT+ +A+ R ++
Sbjct: 121 TAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLI 167
>gi|330876081|gb|EGH10230.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 137
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126
+ C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IG
Sbjct: 1 TEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAIG 59
Query: 127 IQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD
Sbjct: 60 IPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHGVPLGGELDL 119
Query: 186 LDDGTIFEAIRSRTVL 201
+D GT+ + R +
Sbjct: 120 VDGGTLAHSFAGRKPI 135
>gi|195952624|ref|YP_002120914.1| recombination protein RecR [Hydrogenobaculum sp. Y04AAS1]
gi|195932236|gb|ACG56936.1| recombination protein RecR [Hydrogenobaculum sp. Y04AAS1]
Length = 223
Score = 190 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ + + ++ + IPG+G ++A R +K + + +++ N++ + C
Sbjct: 4 EDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLF-SITTCKE 62
Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122
C + + CAIC + +R I VVE+ D + +E+ + +YH+LGG +SPL+ I P
Sbjct: 63 CNILTDQEVCAICSNPKRSKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAP 122
Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--------------- 167
ED+ I+ L ERI +E+I A + EG+ TA+Y++ +K ++
Sbjct: 123 EDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSMPR 182
Query: 168 ---------VKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
KITR+A I G+ ++Y+DD ++ E+I R
Sbjct: 183 TTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKR 222
>gi|26554261|ref|NP_758195.1| recombination protein RecR [Mycoplasma penetrans HF-2]
gi|26454270|dbj|BAC44599.1| recombinational DNA repair protein RecR [Mycoplasma penetrans HF-2]
Length = 201
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ KE E ++ L +P ++A + ++ E + + ++ + + C C
Sbjct: 1 MKPKEFEYFVEALKSLPTISNKNASKIAYFFLEADEVFYSQFLDRLTSLKSNIKFCLNCN 60
Query: 65 NVDTTDP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ + C IC RD + + +V + DL +E S + + LY VL + D +
Sbjct: 61 NLTSDSLYCDICNTDSRDKNKLCIVSYLEDLEKIEASNSFSGLYFVLNTEIKHKDLKTAK 120
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGS 181
I ++ L I +RE++ + TI+G+ T+ YI + + K ++ + RLA GIPM +
Sbjct: 121 KINLEKLENMINKFHVREILICTNMTIDGELTSSYIKNFIKEKNYNIDLYRLALGIPMNA 180
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
++Y+D ++ +I ++ +
Sbjct: 181 SIEYIDWESLKYSIENKRKI 200
>gi|83319376|ref|YP_424008.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|83283262|gb|ABC01194.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 196
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++ + G +++ R ++L+ K++ L + + + C ICG
Sbjct: 1 MPESIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDK-LDEFINQLNKVNQLISTCKICG 59
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C +C R+ + I +V + D +E + +YH+L G ++ I +
Sbjct: 60 YLSENNKCLVCSLDNRNQNTICIVSTILDAKNIENANKYKGVYHILNGEINLNKNITFDK 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I S+ +RI E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LD
Sbjct: 120 LNISSIFKRINDD--TEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLD 177
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D+ T+ A +R
Sbjct: 178 YMDEFTLQSAFINRKK 193
>gi|227328732|ref|ZP_03832756.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 179
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C
Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62
Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD I P
Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIWPGR 122
Query: 125 IGI 127
Sbjct: 123 YRF 125
>gi|313664898|ref|YP_004046769.1| recombination protein RecR [Mycoplasma leachii PG50]
gi|312950058|gb|ADR24654.1| putative recombination protein RecR [Mycoplasma leachii PG50]
Length = 196
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++ + G +++ R ++L+ K++ L + + + C ICG
Sbjct: 1 MPESIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDK-LNEFINQLNKVSQLISTCKICG 59
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + C +C R+ ++I +V + D +E + +YH+L G ++ I +
Sbjct: 60 YLSENEKCLVCSLDNRNQNIICIVSTILDAKNIETANKYKGVYHILNGEINLNKNITFDK 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ I S+ +R+ E+I A+++T EG+ TA+Y+ L +VKITRLA G+PMG+ LD
Sbjct: 120 LNISSIFKRVNDN--TEIILALNSTFEGELTANYLYKLLSTKNVKITRLAKGMPMGASLD 177
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D+ T+ A +R
Sbjct: 178 YMDEFTLQSAFINRKK 193
>gi|308190300|ref|YP_003923231.1| recombinational DNA repair protein [Mycoplasma fermentans JER]
gi|319777694|ref|YP_004137345.1| recombination protein recr [Mycoplasma fermentans M64]
gi|238810243|dbj|BAH70033.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|307625042|gb|ADN69347.1| recombinational DNA repair protein [Mycoplasma fermentans JER]
gi|318038769|gb|ADV34968.1| Recombination protein RecR [Mycoplasma fermentans M64]
Length = 196
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ IE L ++L IPG + A + + +K+ ++ + L +++ ++ + CSIC +
Sbjct: 4 ETIEKLNQVLTTIPGISKKQADKMSNFFLKQDQEYIDNLVKSINDLKTNISYCSICNFLK 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C +C D+ R + +++VE+ A L ++ N Y+VL + + ++
Sbjct: 64 EGGKCLVCDDKSR-YNFLMIVENAATLRKIDDMNFYNGYYYVLPYLFNLKNNKEIKNYDY 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDYL 186
+ LI I+ KK E+I +S ++EG+ T +++ + +K+TR A G+PMGS L+YL
Sbjct: 123 KELINYIQHKKFDEVIIVLSPSLEGEMTTGHLLKLINSQFKIKVTRAAIGMPMGSNLEYL 182
Query: 187 DDGTIFEAIRSRTV 200
D TI ++I +R
Sbjct: 183 DTFTIKQSIENRNK 196
>gi|146321217|ref|YP_001200928.1| recombinational DNA repair protein (RecF pathway) [Streptococcus
suis 98HAH33]
gi|145692023|gb|ABP92528.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus
suis 98HAH33]
Length = 135
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 79/134 (58%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + ++ ++ A+ + + CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+D
Sbjct: 62 NLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDD 121
Query: 125 IGIQSLIERIEVKK 138
I +++L+ R+ +
Sbjct: 122 INLKTLLTRLMENE 135
>gi|304372904|ref|YP_003856113.1| Recombination protein [Mycoplasma hyorhinis HUB-1]
gi|304309095|gb|ADM21575.1| Recombination protein [Mycoplasma hyorhinis HUB-1]
gi|330723508|gb|AEC45878.1| recombination protein RecR [Mycoplasma hyorhinis MCLD]
Length = 190
Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ GKE E LI PG G + A + L+ K + L++ + + + C C
Sbjct: 1 MFGKEYEELISTFKTFPGVGKKQAEKFFYFLLNKDIEFFQDLSQKIIKLKQNLQPCERCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V C+IC+D R +S I++VE+ +D+ E + Y V + +
Sbjct: 61 FVSLNVVCSICLDPDR-SSQIMLVENSSDVIKFENLRFYEGKYFVFDYK----KGVDNKY 115
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ + R +++ ELI A S IEG A+++M+ +VKI++LA GIP+G++++
Sbjct: 116 LTAKINKLRNLIRENTELIVAFSFNIEGLVLANFVMNHKDLKNVKISKLASGIPLGAQIE 175
Query: 185 YLDDGTIFEAIRSRT 199
Y+D+ T+ EAI++R
Sbjct: 176 YVDELTLKEAIKNRK 190
>gi|294155948|ref|YP_003560332.1| recombination protein RecR [Mycoplasma crocodyli MP145]
gi|291600313|gb|ADE19809.1| recombination protein RecR [Mycoplasma crocodyli MP145]
Length = 193
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I NLI ++ I R A + ++ ++ + L A+ + + CSIC
Sbjct: 1 MENNPINNLISLVKNIDTVSKRQAEKIVSWIINCPKEQINELVSAINLVKTNINKCSICT 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N+ T + C IC + RD ++++VVE+ ++ +E ++ N Y V + P + +D
Sbjct: 61 NLTTNEVCEICTSEDRD-NILMVVENFNNIKKIEENEIFNGKYFVFSELIKP--KKTSQD 117
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I ++ E+I AIS T+EG+ T ++ LK + ++ ++ GIP+G+ +D
Sbjct: 118 IEKKAEELAQFSANFDEVILAISPTLEGEITNEFLRKYLKNRKINVSSISIGIPVGANID 177
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D ++ ++I +R
Sbjct: 178 YIDSISLKQSIINRRK 193
>gi|172041590|ref|YP_001801304.1| recombination protein RecR [Corynebacterium urealyticum DSM 7109]
gi|171852894|emb|CAQ05870.1| recombination protein [Corynebacterium urealyticum DSM 7109]
Length = 273
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKE-QLLGPLAEAMANIYNKVCLCSIC 63
+ ++++I A +PG GP+SA+R LHL++ + + + N+++ V C IC
Sbjct: 1 MFEGPLQDVIDEFASLPGIGPKSAQRIALHLLENATGEDIERFQATLGNLHSGVAFCRIC 60
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
N+ D C IC D RDAS++ VVE+ D+ +ER+ YHVLGG+L PL+ +GP
Sbjct: 61 HNISQEDVCRICADSSRDASLVCVVEEPKDIQVIERTGEYRGRYHVLGGALDPLNGVGPG 120
Query: 124 DIGIQSLIERIE 135
++ + +L++RI
Sbjct: 121 ELNVTALVQRIG 132
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDG 189
+E E +I E+I A EG+ TA Y+ LK + ++RLA GIPMG +L+++D+
Sbjct: 200 VEYREAPEITEVIIATDPNTEGEATASYLGRLLKEFPGLTVSRLASGIPMGGDLEFVDEL 259
Query: 190 TIFEAIRSRTVL 201
T+ A RT L
Sbjct: 260 TLSRAFAGRTQL 271
>gi|237750811|ref|ZP_04581291.1| recombination protein RecR [Helicobacter bilis ATCC 43879]
gi|229373256|gb|EEO23647.1| recombination protein RecR [Helicobacter bilis ATCC 43879]
Length = 178
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
L ++P G +SAR+ L + L +A+A+ + + C +CG + + C IC+
Sbjct: 3 LKKMPTIGKKSARKMAYTLAIENAPLGLQIAQAIHDCIATIEKCKVCGALSHGEICHICL 62
Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136
D R + +V D++ +E + +Y V+ + LI+RI+
Sbjct: 63 DSTRKNGTLCIVSHPKDVFLIEDIGEFHGVYCVIEDY---------KHCDFTDLIQRIKD 113
Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196
+ I E+IFA ++E +I +KL + +K +++A G+P LD +D ++ A
Sbjct: 114 ENIEEVIFAFMPSLESDIVVMFIQEKLADLCLKFSKIAQGVPSNVSLDNIDHFSLARAFN 173
Query: 197 SR 198
+R
Sbjct: 174 AR 175
>gi|309798671|ref|ZP_07692938.1| recombination protein RecR [Streptococcus infantis SK1302]
gi|308117717|gb|EFO55126.1| recombination protein RecR [Streptococcus infantis SK1302]
Length = 133
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 70/125 (56%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ I LI +++PG G ++A R + + + + A+ + ++ CSICG
Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D
Sbjct: 62 RLTDDDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121
Query: 125 IGIQS 129
I ++
Sbjct: 122 INLKK 126
>gi|148377948|ref|YP_001256824.1| recombination protein RecR [Mycoplasma agalactiae PG2]
gi|148291994|emb|CAL59386.1| Recombination protein RecR [Mycoplasma agalactiae PG2]
Length = 195
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K I+ L K L IP + A + +++K + + E + +K+ C C
Sbjct: 1 MNIKTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILETKDKIGFCEKCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ CA C D+ + +IVVE VA + + + N + VL LS + D
Sbjct: 61 FIVENGKCANC-DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVD 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L+ I+ KKI E+I +S TIEGQ T +M + IDVK+TR A G+P+ + ++
Sbjct: 120 FNYEHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKVTRAAVGLPLNANIE 179
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D+ TI +AI +RT
Sbjct: 180 YIDEFTIKQAIENRTK 195
>gi|110003915|emb|CAK98255.1| putative recombination protein recr dna repair [Spiroplasma citri]
Length = 174
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75
L I G G ++A R + + K LL L I N C IC + + C C
Sbjct: 2 ELKTILGVGKKTAERI-FNKLIIKPSLLQTLEHVFNEIKNNYHQCPICSTLMQNNVCLFC 60
Query: 76 IDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIE 135
+ RD + + VV + D+ +E +K N +YHVL G ++ + I P+ + L R+
Sbjct: 61 HNDLRDQTKLCVVSNFFDIIKIEATKVFNGVYHVLNGEINVKNGITPDKMTFPVLESRMN 120
Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178
K I+E+I A+ AT EG+ TA Y+ L+ D+KI+RLA GIP
Sbjct: 121 DKIIKEVIIAVGATFEGEVTAQYLKTFLQSFDIKISRLAQGIP 163
>gi|71894077|ref|YP_278185.1| recombination protein RecR [Mycoplasma synoviae 53]
gi|71850865|gb|AAZ43474.1| putative recombination protein [Mycoplasma synoviae 53]
Length = 194
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
IE I + +IPG + A + ++ K+ + L+ + + + CS C
Sbjct: 7 IEEFITKIRKIPGISRKQAEKIVAWILYSKDDEIYELSNYFKKLKDNISFCSFCNIPQEN 66
Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129
+ C IC D R+ ++ VVE+ + LE+ Y V + + + +
Sbjct: 67 NNCYICNDTSRENKLL-VVENPLIIEKLEKLSLFKGKYFVFKNLVKNEKSLDKFYLDLSK 125
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L++ K E+IF IS T+EG+ T + I + + + ++LA GIP+G+ +DY+D+
Sbjct: 126 LLKYC--KNFEEVIFGISPTLEGEVTTNLIRKEFEKFQINSSQLAIGIPIGASIDYMDEI 183
Query: 190 TIFEAIRSRTV 200
T+ +I++R
Sbjct: 184 TLKFSIKNRQK 194
>gi|83749763|ref|ZP_00946739.1| RecR [Ralstonia solanacearum UW551]
gi|83723583|gb|EAP70785.1| RecR [Ralstonia solanacearum UW551]
Length = 156
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 49/131 (37%), Positives = 70/131 (53%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C
Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 67
Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125
D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP
Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPTGT 127
Query: 126 GIQSLIERIEV 136
++ L+ R
Sbjct: 128 HLEPLLARATD 138
>gi|293364018|ref|ZP_06610754.1| recombination protein RecR [Mycoplasma alligatoris A21JP2]
gi|292552508|gb|EFF41282.1| recombination protein RecR [Mycoplasma alligatoris A21JP2]
Length = 194
Score = 177 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
IE +I++L R+ G + A R +++ + + L ++ + N+V C CGN+
Sbjct: 6 SIEKIIELLKRVDGISKKQAERILSWVIQSDIKDVETLLNSIKTLKNEVKECKRCGNLTA 65
Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128
+ C IC+D+ RD +V++VVE + +E+ + N Y V L+ + +
Sbjct: 66 SGVCNICLDEDRD-NVLLVVEHFNIIKKMEKEEIYNGKYFVFKELLNIKNFNEKIEKYAY 124
Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188
L E K E+I AIS T+EG T Y+ L + T ++ G+P+G+ LDY+D
Sbjct: 125 ELAEY--GKNFEEVILAISPTLEGAITNEYLKKYLTSKKINATSISIGVPVGASLDYIDK 182
Query: 189 GTIFEAIRSRTV 200
TI ++I +R
Sbjct: 183 ITIKQSIENRRK 194
>gi|242308884|ref|ZP_04808039.1| recombination protein RecR [Helicobacter pullorum MIT 98-5489]
gi|239524548|gb|EEQ64414.1| recombination protein RecR [Helicobacter pullorum MIT 98-5489]
Length = 190
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K + L++ L ++P G +SA R L + + +A + + ++ +C C
Sbjct: 2 KSIPESFAKLVESLEKLPSIGKKSAMRLAYFLAFEDKLSALQIAHNIESCMQELRICEEC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123
+ C IC + R+ + ++ +++ LE S N Y V+ E
Sbjct: 62 FGISKEPICEICSNSMRNNGELCIIASPKEIFLLEESGEFNGKYFVITSL---------E 112
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ +++L +I IRE+IFA+S ++ + Y+ DKL +D++ T++A G+P G L
Sbjct: 113 TLDMKALERKIIKNNIREIIFALSPSLSSDSLMLYLEDKLSHLDLQFTKIAQGVPTGVSL 172
Query: 184 DYLDDGTIFEAIRSRTVL 201
+ +D +I A++SR +
Sbjct: 173 ENIDQLSIIRALQSRVKI 190
>gi|291320672|ref|YP_003515937.1| Recombination protein RecR [Mycoplasma agalactiae]
gi|290753008|emb|CBH40984.1| Recombination protein RecR [Mycoplasma agalactiae]
Length = 195
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ K I+ L K L IP + A + +++K + + E + + +K+ C C
Sbjct: 1 MNIKTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILDTKDKIGFCKKCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C C D+ + +IVVE VA + + + N + VL LS + D
Sbjct: 61 FIVENGKCVNC-DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVD 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
+ L+ I+ KKI E+I +S TIEGQ T +M + IDVK TR A G+P+ S ++
Sbjct: 120 FNYEHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKATRAAVGLPLNSNIE 179
Query: 185 YLDDGTIFEAIRSRTV 200
Y+D+ TI +AI +RT
Sbjct: 180 YIDEFTIKQAIENRTK 195
>gi|317052105|ref|YP_004113221.1| Zinc finger C4-type protein RecR [Desulfurispirillum indicum S5]
gi|316947189|gb|ADU66665.1| Zinc finger C4-type, RecR [Desulfurispirillum indicum S5]
Length = 208
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+E L + LA+IPG G ++A R L + + A + N++ C C
Sbjct: 2 YALPSVELLAQGLAQIPGIGQKTAERFALEVAAMAPAKRQAIVRAFEELENRLIACDECH 61
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ + PC +C + R+ + VVE DL A+E + LYHVLGG +SP+ P+D
Sbjct: 62 TLAESSPCPLCRNTSRNRRQLCVVETFHDLVAIENAGVYEGLYHVLGGKVSPVAHCSPQD 121
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182
+ +Q+L +RI + E+I A S T E + T + + + ++T + +P+G+
Sbjct: 122 LFLQTLPQRIRELGVAEVIIAASHTPESRITMELVKRSVLSAKTNTQVTFFSSLLPVGAP 181
Query: 183 LDYLDDGTIFEAIRSRT 199
L + +A +R
Sbjct: 182 LSICAVDILKKAFHARK 198
>gi|240047505|ref|YP_002960893.1| recombination protein RecR [Mycoplasma conjunctivae HRC/581]
gi|239985077|emb|CAT05070.1| Recombination protein [Mycoplasma conjunctivae]
Length = 194
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ G + E L K + +PG G + + + L+ + E + N+ C C
Sbjct: 1 MYGNDFEELAKKIKILPGVGKKQSEKILHFLLDAPIDDINTFIEELYNLKKNFQHCRQCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
V C+IC+D QR+ ++ VVE+ + E S Y VLG + + D
Sbjct: 61 FVSRNRLCSICLDDQRENKIL-VVENSDIVAKFENSGEYKGRYFVLGDF--NIKNLSALD 117
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I L +I ELI IS+T++G YI ++KI++LA GIP G+ +D
Sbjct: 118 DKINQL--KIMANNDSELILGISSTLDGLIVTSYITKHEVVANLKISQLATGIPFGANID 175
Query: 185 YLDDGTIFEAIRSRTV 200
YLD T+ +A+++R
Sbjct: 176 YLDKITLQQALKNRRE 191
>gi|213421304|ref|ZP_03354370.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 113
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C
Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62
Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115
D C IC + +R + I VVE AD++A+E++ + Y VL G LS
Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLS 113
>gi|217033112|ref|ZP_03438575.1| hypothetical protein HPB128_8g3 [Helicobacter pylori B128]
gi|216945155|gb|EEC23848.1| hypothetical protein HPB128_8g3 [Helicobacter pylori B128]
Length = 162
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90
HL + L + A+ N + C+ C + ++ C IC D+ R S + +V
Sbjct: 1 MAYHLGLENPYLALKITHALENALENLKTCASCNALSESEICEICSDESRQNSQLCMVLH 60
Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150
D++ LE K Y+VL E++ +L +R+ + I+E+IFA T+
Sbjct: 61 PRDVFILEDLKDFLGRYYVLNS---------IEEVDFNALEKRLIEENIKEIIFAFPPTL 111
Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198
+ YI DKL+ + T++A G+P G + +D ++ A SR
Sbjct: 112 ANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSR 159
>gi|71893606|ref|YP_279052.1| recombination protein RecR [Mycoplasma hyopneumoniae J]
gi|71851733|gb|AAZ44341.1| recombination protein [Mycoplasma hyopneumoniae J]
Length = 194
Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +NL + L +IPG + A R LV + + A+ ++ C CG
Sbjct: 1 MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAIYDLKKNTQYCEKCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGS-LSPLDRIGPE 123
++T C IC+D QR ++ VVE+ + E + Y V G + L+ +
Sbjct: 61 YLNTNPVCEICLDFQRSFKIL-VVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNAQ 119
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L E+I +S+T+EG A+Y+ +KITRLA GIP G+ +
Sbjct: 120 IKKLADL-----AANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAII 174
Query: 184 DYLDDGTIFEAIRSRTVL 201
DY+D+ T+ +A+++R +
Sbjct: 175 DYIDNITLDQALKNRQEM 192
>gi|322382241|ref|ZP_08056154.1| hypothetical protein PL1_3204 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153822|gb|EFX46190.1| hypothetical protein PL1_3204 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 105
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 72/104 (69%)
Query: 97 LERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTA 156
+ER+K + YHVL G++SP++ IGP+ I I L++R+ +K++ELI A + IEG+ TA
Sbjct: 1 MERTKEFDGYYHVLHGAISPMEGIGPDQIHIAELLKRLGDEKVQELILATNPNIEGEATA 60
Query: 157 HYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
YI +KG +K+TR+A G+P+G +L+Y D+ T+ +A+ R
Sbjct: 61 MYISRLVKGFGLKVTRIARGLPVGGDLEYADEVTLSKALEGRRE 104
>gi|54020351|ref|YP_115635.1| recombination protein RecR [Mycoplasma hyopneumoniae 232]
gi|53987524|gb|AAV27725.1| recombination protein recR [Mycoplasma hyopneumoniae 232]
Length = 194
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 5/197 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +NL + L +IPG + A R LV + + A+ ++ C CG
Sbjct: 1 MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
++T C IC+D QR ++ VVE+ + E + Y V G + + +
Sbjct: 61 YLNTNPVCEICLDFQRSFKIL-VVENTEMIAKFEEYGKYDGQYFVFGK--YDIKNLENHN 117
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184
I+ L + K E+I +S+T+EG A+Y+ +KITRLA GIP G+ +D
Sbjct: 118 TQIKKLADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIID 175
Query: 185 YLDDGTIFEAIRSRTVL 201
Y+D+ T+ +A+++R +
Sbjct: 176 YIDNITLDQALKNRQEM 192
>gi|72080597|ref|YP_287655.1| recombination protein RecR [Mycoplasma hyopneumoniae 7448]
gi|71913721|gb|AAZ53632.1| recombination protein recR [Mycoplasma hyopneumoniae 7448]
gi|312601233|gb|ADQ90488.1| Recombination protein recR [Mycoplasma hyopneumoniae 168]
Length = 194
Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +NL + L +IPG + A R LV + + A+ ++ C CG
Sbjct: 1 MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCG 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGS-LSPLDRIGPE 123
++T C IC+D QR ++ VVE+ + E + Y V G + L+ +
Sbjct: 61 YLNTNPVCEICLDFQRSFKIL-VVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNAQ 119
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183
+ L E+I +S+T+EG A+Y+ +KITRLA GIP G+ +
Sbjct: 120 IKKLADL-----AANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAII 174
Query: 184 DYLDDGTIFEAIRSRTVL 201
DY+D+ T+ +A+++R +
Sbjct: 175 DYIDNITLDQALKNRQEM 192
>gi|313678823|ref|YP_004056563.1| recombination protein RecR [Mycoplasma bovis PG45]
gi|312950566|gb|ADR25161.1| putative recombination protein RecR [Mycoplasma bovis PG45]
Length = 195
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 1/193 (0%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
K I L K L IP + A + + +++K ++ + E + +K+ C C +
Sbjct: 4 KTINELTKKLISIPTITKKQAEKLSDYILKASKEEISSTLEFILEAKDKIGFCEKCNFIV 63
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
C C D+ + +I+VE VA + + + N ++VL LS + + D
Sbjct: 64 ENGKCVNC-DRFNLWNTLIIVESVASVKKIFDTDFYNGYFYVLPYLLSVVPKDAKIDFNY 122
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
+ L++ I++K+I E+I +S TIEGQ T +M + IDVK TR A G+P+ S ++Y+D
Sbjct: 123 EHLVKFIKLKRINEVIIVLSPTIEGQMTTAQLMQICREIDVKATRAAVGLPLNSNIEYID 182
Query: 188 DGTIFEAIRSRTV 200
+ TI +AI +RT
Sbjct: 183 EFTIKQAIENRTK 195
>gi|17232469|ref|NP_489017.1| recombination protein [Nostoc sp. PCC 7120]
gi|17134115|dbj|BAB76676.1| recombination protein [Nostoc sp. PCC 7120]
Length = 108
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
+ ALE+++ YHVLGG +SP+D IGPE + I L+ R+ ++ +E+I AIS ++EG+
Sbjct: 1 MIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQQQPKEVILAISPSVEGE 60
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
TT Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+ R L
Sbjct: 61 TTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYADEITLARALEGRREL 107
>gi|255018815|ref|ZP_05290941.1| recombination protein RecR [Listeria monocytogenes FSL F2-515]
Length = 106
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 66/96 (68%)
Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
LYHVL G++SP+D IGPEDI I L++R++ I E+I A + +EG+ TA YI LK
Sbjct: 10 GLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLK 69
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
+K+TR+A+G+P+G +L+Y D+ T+ +A+ R
Sbjct: 70 PSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRRE 105
>gi|213018575|ref|ZP_03334383.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995526|gb|EEB56166.1| recombination protein RecR [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 118
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIF 144
+ VVE++ DLWA E+ + +YHVLGG LS ++ IGP+++ + ++ +R+ KI E+I
Sbjct: 1 MCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDNIPKRVTEFKIEEVII 60
Query: 145 AISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
AI+ T+EGQ TA YI++ LK +VKI+RLA GIP+G E+DYLD+GT+ A+ SR +
Sbjct: 61 AINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDYLDEGTLKIALTSRQDI 117
>gi|89892381|gb|ABD78970.1| HI0443-like protein [Haemophilus influenzae]
Length = 109
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 68/108 (62%)
Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153
+ A+E++ + Y VL G LSPLD IGP +IG+ L +R+ + E+I A + T+EG
Sbjct: 1 IQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGD 60
Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
TA+YI + + ++K++R+A+GIP+G EL+ +D T+ + R +
Sbjct: 61 ATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQI 108
>gi|269114871|ref|YP_003302634.1| Recombination protein recR [Mycoplasma hominis]
gi|268322496|emb|CAX37231.1| Recombination protein recR [Mycoplasma hominis ATCC 23114]
Length = 196
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ EI+ L ++L + F + +++ ++ K + + + + + N + C+IC
Sbjct: 1 MNNIEIQKLEELLKTVFDFTKKQSQKFIFNIFKSSSEDIDQICNQIKALRNSIKKCNICN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
+ C IC+D R +++V + D+ E Y V ++S +
Sbjct: 61 RYNENTICNICLDTNR-TKQLMLVGNSLDIDKFENIGLYKGKYFVFDQNISLKNEDFIVS 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKIT---RLAYGIPMGS 181
++ LI+ ++ K ELI ++S TIEGQ HYI LK + T +L+ GIP+GS
Sbjct: 120 SLLEKLIDILKDKN--ELILSLSPTIEGQFNMHYIKKFLKNK-INFTNVFQLSTGIPLGS 176
Query: 182 ELDYLDDGTIFEAIRSRTVL 201
++Y+D T+ E++ ++ +
Sbjct: 177 SVEYIDQDTLKESLLNKIKM 196
>gi|193216550|ref|YP_001999792.1| recombination protein RecR [Mycoplasma arthritidis 158L3-1]
gi|193001873|gb|ACF07088.1| recombination protein RecR [Mycoplasma arthritidis 158L3-1]
Length = 196
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + + L L I G + +++ + L +A + I C C
Sbjct: 1 MYDELLNKLTIKLKAIQGLNKKQITAIVEYILNAESGELDDIAMLIKTIKTTYKKCLFCN 60
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124
N + + C IC D R+ ++VVE+ + E ++ Y +L +P +
Sbjct: 61 NFSSQEKCEICSDSTRENK-LMVVENAKTIKQFEVAQIYRGKYFILEALYNPKKPNLLFN 119
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAYGIPMGSE 182
++ L+ + K E++ A+S TIEG T Y+ L+ + + +LA GIP+G
Sbjct: 120 KNLEKLL--LIATKANEVVLALSPTIEGAITMDYLKKSLRDANNMHNVYQLATGIPLGVN 177
Query: 183 LDYLDDGTIFEAIRSRTVL 201
++Y+D T+ ++ +T
Sbjct: 178 VEYIDSETLKQSFLKKTKF 196
>gi|262171931|ref|ZP_06039609.1| recombination protein recR [Vibrio mimicus MB-451]
gi|261893007|gb|EEY38993.1| recombination protein recR [Vibrio mimicus MB-451]
Length = 117
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 64/106 (60%)
Query: 96 ALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTT 155
ALE + + Y VL G LSPLD IG DI + +L R++ K I E+I A + T+EG+ T
Sbjct: 11 ALEATGQFSGRYFVLMGHLSPLDGIGSSDIWLDTLDYRLQRKDISEVILATNPTVEGEAT 70
Query: 156 AHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
A YI + + V +R+A+G+P+G EL+ +D T+ ++ R L
Sbjct: 71 AQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGRHKL 116
>gi|149912023|ref|ZP_01900616.1| recombination protein RecR [Moritella sp. PE36]
gi|149804884|gb|EDM64919.1| recombination protein RecR [Moritella sp. PE36]
Length = 99
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 62/97 (63%)
Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
Y VL G LSPLD IGP++IG+ L E + ELI A + T+EG+ TA+YI + +
Sbjct: 2 GQYFVLMGHLSPLDGIGPDEIGLDKLAELLASGDYEELILATNPTVEGEATAYYIAEIAQ 61
Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
VK +R+A+G+P+G EL+Y+D T+ ++ R ++
Sbjct: 62 EYGVKASRIAHGVPVGGELEYVDGTTLSHSLLGRQLI 98
>gi|238021753|ref|ZP_04602179.1| hypothetical protein GCWU000324_01656 [Kingella oralis ATCC 51147]
gi|237866367|gb|EEP67409.1| hypothetical protein GCWU000324_01656 [Kingella oralis ATCC 51147]
Length = 120
Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 69/112 (61%)
Query: 90 DVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149
AD+ A+E + + LY VL GS++P + + ++ LI R+ ++E+I A S T
Sbjct: 1 MPADVAAMEAAHCHDGLYFVLMGSVNPTQNMDLSHVALEKLIARLADSPVQEIIIATSFT 60
Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
EG TA+ + + LK KI+RLA G+P+GSEL+Y+D GT+ +A+ R +L
Sbjct: 61 AEGDATAYILTELLKEQPYKISRLARGMPLGSELEYVDAGTLAQAVYERQLL 112
>gi|225025708|ref|ZP_03714900.1| hypothetical protein EIKCOROL_02610 [Eikenella corrodens ATCC
23834]
gi|224941489|gb|EEG22698.1| hypothetical protein EIKCOROL_02610 [Eikenella corrodens ATCC
23834]
Length = 124
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 70/115 (60%)
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
++V AD+ +E + + LY VL G +SP + + I + L+ R++ ++ E+I A
Sbjct: 1 MIVHLPADVAGMEAAHCHDGLYFVLMGQISPAQGMDLQHIALDKLVARLQESEVEEVIIA 60
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
+ T EG TA+ + + K + +++RLA G+P+GSEL+Y+D GT+ +++ R +
Sbjct: 61 TAFTPEGNATAYVLAELFKNLPYRVSRLAQGMPLGSELEYIDAGTLAQSVYERRL 115
>gi|56807612|ref|ZP_00365515.1| COG0353: Recombinational DNA repair protein (RecF pathway)
[Streptococcus pyogenes M49 591]
Length = 87
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 61/87 (70%)
Query: 115 SPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174
SP++ +GP+DI ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA
Sbjct: 1 SPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLA 60
Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201
G+ +GS+++Y D+ T+ AI +RT L
Sbjct: 61 RGLAVGSDIEYADEVTLLRAIENRTEL 87
>gi|256004008|ref|ZP_05428993.1| recombination protein RecR [Clostridium thermocellum DSM 2360]
gi|255991931|gb|EEU02028.1| recombination protein RecR [Clostridium thermocellum DSM 2360]
Length = 76
Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185
I+ L++RI+ ++E+I A + IEG+ TA YI +K + VK TR+A+GIP+G +L+Y
Sbjct: 1 KIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLEY 60
Query: 186 LDDGTIFEAIRSRTVL 201
D+ T+ +A+ R +
Sbjct: 61 ADEVTLAKALEGRREI 76
>gi|227328733|ref|ZP_03832757.1| recombination protein RecR [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 86
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180
GP+DIG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G
Sbjct: 4 GPDDIGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVG 63
Query: 181 SELDYLDDGTIFEAIRSRTVL 201
EL+ +D T+ ++ R
Sbjct: 64 GELEMVDGTTLSHSLAGRQPF 84
>gi|270676254|ref|ZP_06222702.1| Recombination protein recR [Haemophilus influenzae HK1212]
gi|270316405|gb|EFA28301.1| Recombination protein recR [Haemophilus influenzae HK1212]
Length = 68
Score = 103 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAI 195
+ E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D T+ +
Sbjct: 2 EESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSF 61
Query: 196 RSRTVL 201
R +
Sbjct: 62 LGRRQI 67
>gi|213422306|ref|ZP_03355372.1| recombination protein RecR [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 72
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191
+R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D T+
Sbjct: 1 QRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELEMVDGTTL 60
Query: 192 FEAIRSRTVL 201
++ R +
Sbjct: 61 SHSLAGRHKI 70
>gi|146321216|ref|YP_001200927.1| recombination protein [Streptococcus suis 98HAH33]
gi|145692022|gb|ABP92527.1| putative recombination protein [Streptococcus suis 98HAH33]
Length = 64
Score = 101 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199
RE+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+ T+ AI +RT
Sbjct: 3 REVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRT 62
Query: 200 VL 201
L
Sbjct: 63 EL 64
>gi|270682533|ref|ZP_06222778.1| Recombination protein recR [Haemophilus influenzae HK1212]
gi|270316297|gb|EFA28230.1| Recombination protein recR [Haemophilus influenzae HK1212]
Length = 61
Score = 99.7 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D T+ + R +
Sbjct: 1 MILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQI 60
>gi|42560607|ref|NP_975058.1| DNA repair protein RecR [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|42492103|emb|CAE76700.1| DNA REPAIR PROTEIN RecR [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
Length = 122
Score = 99.7 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63
K+ + +I+ + G +++ R + L+ K++ L + + + C IC
Sbjct: 3 KMLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LNQFIDQLNKTKQLISTCKIC 61
Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115
G + D C +C + R+ ++I +V + D +E + +YH+L G ++
Sbjct: 62 GYLSENDKCLVCSLENRNQNIICIVSTILDAKNIENANKYKGVYHILNGEIN 113
>gi|301320767|gb|ADK69410.1| recombination protein RecR [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 119
Score = 98.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ + +I+ + G +++ R + L+ K++ L + + + C ICG
Sbjct: 1 MLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LNQFIDQLNKTKQLISTCKICG 59
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118
+ D C +C + R+ ++I +V + D +E + +YH+L G ++
Sbjct: 60 YLSENDKCLVCSLENRNQNIICIVSTILDAKNIENANKYKGVYHILNGEINLNK 113
>gi|308447539|ref|XP_003087455.1| hypothetical protein CRE_13870 [Caenorhabditis remanei]
gi|308255670|gb|EFO99622.1| hypothetical protein CRE_13870 [Caenorhabditis remanei]
Length = 427
Score = 98.1 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69
+++LI R+PG GP+SA+R H+++ + + LAE ++ + KV C +CGN+
Sbjct: 6 VQDLIDEFGRLPGIGPKSAQRIAFHILQTQNFDVSRLAELLSEVREKVRFCEVCGNITEE 65
Query: 70 DPC 72
C
Sbjct: 66 VRC 68
>gi|167002257|ref|ZP_02268047.1| recombination protein RecR [Burkholderia mallei PRL-20]
gi|243062074|gb|EES44260.1| recombination protein RecR [Burkholderia mallei PRL-20]
Length = 59
Score = 96.6 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 143 IFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+ A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D GTI A+ R L
Sbjct: 1 MLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRTL 59
>gi|254360629|ref|ZP_04976778.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
gi|153091169|gb|EDN73174.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213]
Length = 63
Score = 95.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
T +ENL++ L +PG GP+SA+R HL+++ L++A+ + + C C
Sbjct: 3 TSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALSKALNEAMSHIGHCKSCRT 62
Query: 66 V 66
Sbjct: 63 F 63
>gi|530446|emb|CAA83773.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 107
Score = 93.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64
+ +++ + G +++ R ++L+ K++ L + + + C ICG
Sbjct: 1 MPESIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDK-LDEFINQLNKVNQLISTCKICG 59
Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG 112
+ + C +C R+ + I +V + D +E + +YH+L G
Sbjct: 60 YLSENNKCLVCSLDNRNQNTICIVSTILDAKNIENANKYKGVYHILNG 107
>gi|330883532|gb|EGH17681.1| recombination protein RecR [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 67
Score = 90.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65
I LI +PG G ++A+R L L+++ LA A+ + V C C
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62
Query: 66 VDTTD 70
+ +
Sbjct: 63 LTEEE 67
>gi|301629102|ref|XP_002943687.1| PREDICTED: hypothetical protein LOC100490174 [Xenopus (Silurana)
tropicalis]
Length = 1629
Score = 87.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIE-GQTTAHYIMDKLKGIDVKITRLAYG 176
+ I D +Q+L+ + K +S +I+ G+ TAH I + LK + +TRLA G
Sbjct: 1554 EDIVMNDPTVQALVREHDAK-------IVSGSIKPGEATAHAISETLKRRGLHVTRLARG 1606
Query: 177 IPMGSELDYLDDGTIFEAIRSRT 199
+P+GSEL+Y+D GTI A+ R
Sbjct: 1607 VPVGSELEYVDLGTIAHALVDRR 1629
>gi|254994838|ref|ZP_05277028.1| recombination protein RecR [Anaplasma marginale str. Mississippi]
Length = 65
Score = 84.2 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++ A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+
Sbjct: 5 VVVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 64
>gi|255002972|ref|ZP_05277936.1| recombination protein RecR [Anaplasma marginale str. Puerto Rico]
gi|255004100|ref|ZP_05278901.1| recombination protein RecR [Anaplasma marginale str. Virginia]
Length = 67
Score = 83.9 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++ A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+
Sbjct: 7 VVVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 66
>gi|254291481|ref|ZP_04962272.1| recombination protein RecR [Vibrio cholerae AM-19226]
gi|150422545|gb|EDN14501.1| recombination protein RecR [Vibrio cholerae AM-19226]
Length = 53
Score = 81.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+ ++ R L
Sbjct: 1 MEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGRHKL 52
>gi|20502759|gb|AAM22613.1|AF399833_2 RecM [Streptococcus thermophilus]
Length = 59
Score = 79.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 27/58 (46%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
+ I LI +++PG G ++A R + + ++ + A+ + ++ CS+
Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSV 59
>gi|19068176|gb|AAL58978.1| DNA repair and recombination protein [Mycoplasma gallisepticum]
Length = 75
Score = 78.9 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193
I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P S +DY D ++
Sbjct: 3 IKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYADSFSLKG 62
Query: 194 AIRSRTVL 201
A ++ ++
Sbjct: 63 AFENKQLI 70
>gi|255022652|ref|ZP_05294638.1| recombination protein RecR [Listeria monocytogenes FSL J1-208]
Length = 43
Score = 76.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200
LK +K+TR+A+G+P+G +L+Y D+ T+ A+ R
Sbjct: 4 LLKPSGIKVTRIAHGLPVGGDLEYADEVTLSXAMEGRRE 42
>gi|207110116|ref|ZP_03244278.1| recombination protein RecR [Helicobacter pylori HPKX_438_CA4C1]
Length = 67
Score = 73.5 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
NL+ L +IP G +SA + HL + L + A+ N + CS C +
Sbjct: 2 NHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALS 61
Query: 68 TTDPCA 73
++ C
Sbjct: 62 ESEVCE 67
>gi|329898077|ref|ZP_08272287.1| hypothetical protein IMCC3088_285 [gamma proteobacterium IMCC3088]
gi|328920976|gb|EGG28400.1| hypothetical protein IMCC3088_285 [gamma proteobacterium IMCC3088]
Length = 41
Score = 65.4 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201
++ V +RLA G+PMG ELDY+D T+ +A+ R L
Sbjct: 1 MMRSKGVSASRLARGVPMGGELDYVDSSTLAQALSGRRPL 40
>gi|330976058|gb|EGH76124.1| recombination protein RecR [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 40
Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLL 43
I LI +PG G ++A+R L L+++
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGG 40
>gi|330960248|gb|EGH60508.1| recombination protein RecR [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 39
Score = 59.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQL 42
I LI +PG G ++A+R L L+++
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSG 39
>gi|115378513|ref|ZP_01465670.1| recombination protein RecR [Stigmatella aurantiaca DW4/3-1]
gi|115364482|gb|EAU63560.1| recombination protein RecR [Stigmatella aurantiaca DW4/3-1]
Length = 39
Score = 59.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHL 35
+T + L+ LA++PG G ++A+R H+
Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHI 31
>gi|207111381|ref|ZP_03245543.1| recombination protein RecR [Helicobacter pylori HPKX_438_CA4C1]
Length = 52
Score = 55.4 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 75 CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERI 134
C D+ R S + +V D++ LE K Y+VL E++ +L +R+
Sbjct: 2 CSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS---------IEEVDFNALEKRL 52
>gi|289678894|ref|ZP_06499784.1| recombination protein RecR [Pseudomonas syringae pv. syringae
FF5]
Length = 32
Score = 53.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHL 35
I LI +PG G ++A+R L L
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQL 32
>gi|257484838|ref|ZP_05638879.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 31
Score = 51.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATL 33
I LI +PG G ++A+R L
Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMAL 30
>gi|303231814|ref|ZP_07318530.1| Holliday junction DNA helicase RuvA [Veillonella atypica
ACS-049-V-Sch6]
gi|302513521|gb|EFL55547.1| Holliday junction DNA helicase RuvA [Veillonella atypica
ACS-049-V-Sch6]
Length = 202
Score = 43.8 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G +SA R L L
Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127
>gi|303230216|ref|ZP_07316984.1| Holliday junction DNA helicase RuvA [Veillonella atypica
ACS-134-V-Col7a]
gi|302515142|gb|EFL57116.1| Holliday junction DNA helicase RuvA [Veillonella atypica
ACS-134-V-Col7a]
Length = 202
Score = 43.8 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G +SA R L L
Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127
>gi|313894615|ref|ZP_07828178.1| Holliday junction DNA helicase RuvA [Veillonella sp. oral taxon 158
str. F0412]
gi|313440805|gb|EFR59234.1| Holliday junction DNA helicase RuvA [Veillonella sp. oral taxon 158
str. F0412]
Length = 202
Score = 43.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G +SA R L L
Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127
>gi|217077241|ref|YP_002334959.1| holliday junction DNA helicase RuvA [Thermosipho africanus TCF52B]
gi|226725448|sp|B7IHQ4|RUVA_THEAB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|217037096|gb|ACJ75618.1| holliday junction DNA helicase RuvA [Thermosipho africanus TCF52B]
Length = 189
Score = 43.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Query: 10 IENLIKILARIPGFGPRSARRATLHL----------VKKKEQLLGPLAEAMANI 53
I +K L+ +PG GP++A R L L + +K++ + EA+ +
Sbjct: 102 INEDVKALSSLPGIGPKTAERIVLELKDTIKELDVSINEKDRKVLEAIEALVTL 155
>gi|282850099|ref|ZP_06259481.1| Holliday junction DNA helicase RuvA [Veillonella parvula ATCC
17745]
gi|282580288|gb|EFB85689.1| Holliday junction DNA helicase RuvA [Veillonella parvula ATCC
17745]
Length = 202
Score = 43.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G +SA R L L
Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127
>gi|238019731|ref|ZP_04600157.1| hypothetical protein VEIDISOL_01606 [Veillonella dispar ATCC 17748]
gi|237863772|gb|EEP65062.1| hypothetical protein VEIDISOL_01606 [Veillonella dispar ATCC 17748]
Length = 202
Score = 43.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G +SA R L L
Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127
>gi|269797654|ref|YP_003311554.1| Holliday junction DNA helicase RuvA [Veillonella parvula DSM 2008]
gi|269094283|gb|ACZ24274.1| Holliday junction DNA helicase RuvA [Veillonella parvula DSM 2008]
Length = 202
Score = 43.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G +SA R L L
Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127
>gi|212711936|ref|ZP_03320064.1| hypothetical protein PROVALCAL_03011 [Providencia alcalifaciens DSM
30120]
gi|212685458|gb|EEB44986.1| hypothetical protein PROVALCAL_03011 [Providencia alcalifaciens DSM
30120]
Length = 205
Score = 43.0 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAIEQEAISSLVKLPGIGKKTAERLV 125
>gi|261343863|ref|ZP_05971508.1| holliday junction DNA helicase RuvA [Providencia rustigianii DSM
4541]
gi|282568250|gb|EFB73785.1| holliday junction DNA helicase RuvA [Providencia rustigianii DSM
4541]
Length = 205
Score = 42.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAIEQEAISSLVKLPGIGKKTAERLV 125
>gi|320528952|ref|ZP_08030044.1| Holliday junction DNA helicase RuvA [Selenomonas artemidis F0399]
gi|320138582|gb|EFW30472.1| Holliday junction DNA helicase RuvA [Selenomonas artemidis F0399]
Length = 198
Score = 42.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
++T + LI + ++PG G ++A R L L
Sbjct: 90 SEVTPHDFYRLIHKKDVKGITKLPGIGKKTAERLVLEL 127
>gi|313895598|ref|ZP_07829154.1| Holliday junction DNA helicase RuvA [Selenomonas sp. oral taxon 137
str. F0430]
gi|312975724|gb|EFR41183.1| Holliday junction DNA helicase RuvA [Selenomonas sp. oral taxon 137
str. F0430]
Length = 198
Score = 42.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
++T + LI + ++PG G ++A R L L
Sbjct: 90 SEVTPHDFYRLIHKKNVKGITKLPGIGKKTAERLVLEL 127
>gi|332978537|gb|EGK15246.1| crossover junction ATP-dependent DNA helicase RuvA [Psychrobacter
sp. 1501(2011)]
Length = 210
Score = 42.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRA 31
M ++ E++ ++ L R+PG G ++A+R
Sbjct: 89 MMSTMSAPELKQAVETDNDVALTRVPGIGKKTAQRL 124
>gi|310643559|ref|YP_003948317.1| holliday junction ATP-dependent DNA helicase ruva [Paenibacillus
polymyxa SC2]
gi|309248509|gb|ADO58076.1| Holliday junction ATP-dependent DNA helicase ruvA [Paenibacillus
polymyxa SC2]
Length = 204
Score = 42.6 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A+R L L K K +G L A
Sbjct: 105 ITFLTKLPGIGKKTAQRMILDL-KDKLDGIGALGMA 139
>gi|304407532|ref|ZP_07389184.1| Holliday junction DNA helicase RuvA [Paenibacillus curdlanolyticus
YK9]
gi|304343483|gb|EFM09325.1| Holliday junction DNA helicase RuvA [Paenibacillus curdlanolyticus
YK9]
Length = 210
Score = 42.6 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
+ L ++PG G ++A+R L L K + PLA
Sbjct: 105 VTFLTKLPGIGKKTAQRMILDL--KDKLGNAPLA 136
>gi|261405408|ref|YP_003241649.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. Y412MC10]
gi|261281871|gb|ACX63842.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. Y412MC10]
Length = 205
Score = 42.6 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A+R L L + L A
Sbjct: 105 ISFLIKLPGIGKKTAQRMILDL----KDKLEGFGNA 136
>gi|329926780|ref|ZP_08281188.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. HGF5]
gi|328938980|gb|EGG35348.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. HGF5]
Length = 205
Score = 42.3 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A+R L L + L A
Sbjct: 105 ISFLIKLPGIGKKTAQRMILDL----KDKLEGFGNA 136
>gi|268589737|ref|ZP_06123958.1| holliday junction DNA helicase RuvA [Providencia rettgeri DSM 1131]
gi|291314889|gb|EFE55342.1| holliday junction DNA helicase RuvA [Providencia rettgeri DSM 1131]
Length = 205
Score = 42.3 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAIEQEAIASLVKLPGIGKKTAERLV 125
>gi|183599000|ref|ZP_02960493.1| hypothetical protein PROSTU_02444 [Providencia stuartii ATCC 25827]
gi|188021215|gb|EDU59255.1| hypothetical protein PROSTU_02444 [Providencia stuartii ATCC 25827]
Length = 205
Score = 42.3 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAIEQEAISSLVKLPGIGKKTAERLV 125
>gi|311113689|ref|YP_003984911.1| crossover junction ATP-dependent DNA helicase RuvA [Rothia
dentocariosa ATCC 17931]
gi|310945183|gb|ADP41477.1| crossover junction ATP-dependent DNA helicase RuvA [Rothia
dentocariosa ATCC 17931]
Length = 206
Score = 42.3 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 6 TGKEIENLI-----KILARIPGFGPRSARRATLHL-----VKKKEQLLGPLAEAMA 51
T E+E + K ++PG GP+SARR L L + K + A+ +A
Sbjct: 93 TATEVERAVATGDDKAFTKVPGIGPKSARRIVLELAGKLILSKDQAEENAPAQGIA 148
>gi|207108290|ref|ZP_03242452.1| recombination protein RecR [Helicobacter pylori HPKX_438_CA4C1]
Length = 49
Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+ I+E+IFA T+ + YI DKL+ + T++
Sbjct: 2 EENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKI 39
>gi|313892063|ref|ZP_07825661.1| Holliday junction DNA helicase RuvA [Dialister microaerophilus UPII
345-E]
gi|329120927|ref|ZP_08249559.1| crossover junction ATP-dependent DNA helicase RuvA [Dialister
micraerophilus DSM 19965]
gi|313119515|gb|EFR42709.1| Holliday junction DNA helicase RuvA [Dialister microaerophilus UPII
345-E]
gi|327471386|gb|EGF16837.1| crossover junction ATP-dependent DNA helicase RuvA [Dialister
micraerophilus DSM 19965]
Length = 200
Score = 41.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I +L ++PG G ++A R L L
Sbjct: 106 ISVLTKLPGIGKKTAERLVLEL 127
>gi|218441378|ref|YP_002379707.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7424]
gi|226725437|sp|B7K970|RUVA_CYAP7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|218174106|gb|ACK72839.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7424]
Length = 209
Score = 41.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
IE LI L++ PG GP++A R L L
Sbjct: 101 IEALINAIVTNDVKTLSKTPGVGPKTAERIALEL 134
>gi|194366898|ref|YP_002029508.1| Holliday junction DNA helicase RuvA [Stenotrophomonas maltophilia
R551-3]
gi|229560131|sp|B4ST34|RUVA_STRM5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|194349702|gb|ACF52825.1| Holliday junction DNA helicase RuvA [Stenotrophomonas maltophilia
R551-3]
Length = 197
Score = 41.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
I L RIPG G ++A R L L
Sbjct: 107 ITALTRIPGIGKKTAERMVLEL----RDRAAQFGA 137
>gi|308070380|ref|YP_003871985.1| Holliday junction DNA helicase ruvA [Paenibacillus polymyxa E681]
gi|305859659|gb|ADM71447.1| Holliday junction DNA helicase ruvA [Paenibacillus polymyxa E681]
Length = 204
Score = 41.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A+R L L K K +G L A
Sbjct: 105 ITFLTKLPGIGKKTAQRMILDL-KDKLDGIGSLGMA 139
>gi|313888460|ref|ZP_07822127.1| Holliday junction DNA helicase RuvA [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845489|gb|EFR32883.1| Holliday junction DNA helicase RuvA [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 194
Score = 41.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
K L ++PG G ++A+R L L + + LA + ++ + V
Sbjct: 107 KSLTKLPGIGKKTAQRIILEL----KDKVEKLALDLTSMTDDV 145
>gi|190575569|ref|YP_001973414.1| Holliday junction DNA helicase RuvA [Stenotrophomonas maltophilia
K279a]
gi|254522833|ref|ZP_05134888.1| Holliday junction DNA helicase RuvA [Stenotrophomonas sp. SKA14]
gi|229560132|sp|B2FRN6|RUVA_STRMK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|190013491|emb|CAQ47126.1| putative Holliday junction DNA helicase [Stenotrophomonas
maltophilia K279a]
gi|219720424|gb|EED38949.1| Holliday junction DNA helicase RuvA [Stenotrophomonas sp. SKA14]
Length = 197
Score = 41.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
I L RIPG G ++A R L L
Sbjct: 107 ITALTRIPGIGKKTAERMVLEL----RDRAAQFGA 137
>gi|163792864|ref|ZP_02186840.1| DNA topoisomerase I [alpha proteobacterium BAL199]
gi|159181510|gb|EDP66022.1| DNA topoisomerase I [alpha proteobacterium BAL199]
Length = 893
Score = 41.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 25/115 (21%)
Query: 83 SVIIVVEDVADLWALERSKAVNAL-YHVLGGS-----LSPLDRIGPEDIGIQSLIERIEV 136
S ++VVE A + Y+VL L P D D L +
Sbjct: 2 SKVVVVESPAKAKTI---NKYLGDDYYVLASYGHIRDLPPKDGSVDPDQDFAMLWQIDPR 58
Query: 137 ------------KKIRELIFAISATIEGQTTAHYIMDKLKGI----DVKITRLAY 175
K +LI A EG+ + ++ L+ + +TR+A+
Sbjct: 59 AEKQVKAIAEALKGATQLILATDPDREGEAISWHVQKVLEERKALKGIDVTRVAF 113
>gi|292670920|ref|ZP_06604346.1| crossover junction endoribonuclease subunit A [Selenomonas noxia
ATCC 43541]
gi|292647541|gb|EFF65513.1| crossover junction endoribonuclease subunit A [Selenomonas noxia
ATCC 43541]
Length = 200
Score = 41.9 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
IT E LI K + ++PG G ++A R L L
Sbjct: 90 SAITANEFYRLIHQKDVKAITKLPGIGKKTAERIILEL 127
>gi|217967908|ref|YP_002353414.1| DNA topoisomerase I [Dictyoglomus turgidum DSM 6724]
gi|217337007|gb|ACK42800.1| DNA topoisomerase I [Dictyoglomus turgidum DSM 6724]
Length = 696
Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 23/112 (20%)
Query: 81 DASVIIVVEDVADLWALERS--KAVNALYHVLGGSLSPLD------RIGPEDIGIQSLIE 132
D +I+VE A +E+ K VL D + E+ +
Sbjct: 2 DNEKLIIVESPAKAKTIEKILGKEFK----VLASYGHIRDLPEKELGVDIENNFKPKYVL 57
Query: 133 RIEVKKIRELI-----------FAISATIEGQTTAHYIMDKLKGIDVKITRL 173
KKI + I A EG+ A +++++LK K TR+
Sbjct: 58 LPSRKKIIDTIKDLSKKAEKLYLATDPDREGEAIAWHLVEELKLPKEKFTRI 109
>gi|253989949|ref|YP_003041305.1| Holliday junction DNA helicase RuvA [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211639070|emb|CAR67683.1| holliday junction atp-dependent dna helicase ruva (ec 3.6.1.-)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781399|emb|CAQ84562.1| holliday junction ATP-dependent DNA helicase RuvA [Photorhabdus
asymbiotica]
Length = 205
Score = 41.5 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAIEQEAIASLVKLPGVGKKTAERLV 125
>gi|251798377|ref|YP_003013108.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. JDR-2]
gi|247546003|gb|ACT03022.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. JDR-2]
Length = 212
Score = 41.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L R+PG G ++A+R L L
Sbjct: 105 IAFLTRLPGIGKKTAQRMILDL 126
>gi|270307810|ref|YP_003329868.1| Holliday junction DNA helicase [Dehalococcoides sp. VS]
gi|270153702|gb|ACZ61540.1| Holliday junction DNA helicase [Dehalococcoides sp. VS]
Length = 194
Score = 41.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
M + + + + I ++L+ IPG G ++A R L L
Sbjct: 89 MLSAMNAEALASAIISGNTELLSTIPGIGKKTASRIVLEL 128
>gi|162453391|ref|YP_001615758.1| DNA topoisomerase I [Sorangium cellulosum 'So ce 56']
gi|161163973|emb|CAN95278.1| DNA topoisomerase I [Sorangium cellulosum 'So ce 56']
Length = 864
Score = 41.5 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 21/110 (19%)
Query: 82 ASVIIVVEDVADLWALERSKAVNAL-YHVLG--GSLSPLDRIG---------------PE 123
A +++VE A + K Y V G + L + E
Sbjct: 2 AKTLVIVESPAKAKTI---KKYLGNGYEVFASKGHVKDLPKKQNAVDVQNDFAETYEVIE 58
Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+ KK E++ A EG+ A +I +++K +K+ R+
Sbjct: 59 GKEKVLEELKSAAKKADEVLLATDPDREGEAIAFHISEEIKNPKLKVARV 108
>gi|323466642|gb|ADX70329.1| DNA topoisomerase I [Lactobacillus helveticus H10]
Length = 704
Score = 41.5 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQS-- 129
+++VE A +E+ YHV+ + D P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFEDNYKPKYISIRGKG 74
Query: 130 ---LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +E+ A EG+ A +I L
Sbjct: 75 DTIKELKSEAKKAKEVYLASDPDREGEAIAWHIAHAL 111
>gi|260101615|ref|ZP_05751852.1| DNA topoisomerase TopA [Lactobacillus helveticus DSM 20075]
gi|260084578|gb|EEW68698.1| DNA topoisomerase TopA [Lactobacillus helveticus DSM 20075]
gi|328467375|gb|EGF38453.1| DNA topoisomerase I [Lactobacillus helveticus MTCC 5463]
Length = 704
Score = 41.5 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQS-- 129
+++VE A +E+ YHV+ + D P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFEDNYKPKYISIRGKG 74
Query: 130 ---LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +E+ A EG+ A +I L
Sbjct: 75 DTIKELKSEAKKAKEVYLASDPDREGEAIAWHIAHAL 111
>gi|161507472|ref|YP_001577426.1| DNA topoisomerase I [Lactobacillus helveticus DPC 4571]
gi|160348461|gb|ABX27135.1| DNA topoisomerase I [Lactobacillus helveticus DPC 4571]
Length = 704
Score = 41.5 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQS-- 129
+++VE A +E+ YHV+ + D P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFEDNYKPKYISIRGKG 74
Query: 130 ---LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +E+ A EG+ A +I L
Sbjct: 75 DTIKELKSEAKKAKEVYLASDPDREGEAIAWHIAHAL 111
>gi|315645785|ref|ZP_07898906.1| Holliday junction DNA helicase RuvA [Paenibacillus vortex V453]
gi|315278546|gb|EFU41860.1| Holliday junction DNA helicase RuvA [Paenibacillus vortex V453]
Length = 178
Score = 41.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
+ L ++PG G ++A+R L L + L A
Sbjct: 78 VSFLVKLPGIGKKTAQRMILDL----KDKLEGFGNA 109
>gi|271500732|ref|YP_003333757.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech586]
gi|270344287|gb|ACZ77052.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech586]
Length = 205
Score = 41.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
M + +E I L ++PG G ++A R V+ K L + N + + L
Sbjct: 93 MSAQQFVSAVERQEINALVKLPGVGKKTAERLV---VEMK-DRFKGLNGDLFNAASDIAL 148
Query: 60 CSICGNVD-TTDP 71
+ GN TDP
Sbjct: 149 PAATGNTTPETDP 161
>gi|300741595|ref|ZP_07071616.1| holliday junction DNA helicase RuvA [Rothia dentocariosa M567]
gi|300380780|gb|EFJ77342.1| holliday junction DNA helicase RuvA [Rothia dentocariosa M567]
Length = 206
Score = 41.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLI-----KILARIPGFGPRSARRATLHL 35
T E+E + K ++PG GP+SARR L L
Sbjct: 93 TATEVERAVATGDDKAFTKVPGIGPKSARRIVLEL 127
>gi|253574942|ref|ZP_04852282.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. oral taxon
786 str. D14]
gi|251845988|gb|EES73996.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. oral taxon
786 str. D14]
Length = 206
Score = 41.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L ++PG G ++A+R L L
Sbjct: 106 VSFLTKLPGIGKKTAQRMILDL 127
>gi|261855148|ref|YP_003262431.1| Holliday junction DNA helicase RuvA [Halothiobacillus neapolitanus
c2]
gi|261835617|gb|ACX95384.1| Holliday junction DNA helicase RuvA [Halothiobacillus neapolitanus
c2]
Length = 206
Score = 41.1 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPL--AEAMANIYNKVC 58
I L R+PG G ++A R ++ +++L +A K+
Sbjct: 107 IAALIRLPGVGRKTAERLV---IEMRDRLAEGFFDGATLATAAGKMG 150
>gi|57234748|ref|YP_181186.1| Holliday junction DNA helicase RuvA [Dehalococcoides ethenogenes
195]
gi|90134862|sp|Q3Z9B3|RUVA_DEHE1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|57225196|gb|AAW40253.1| Holliday junction DNA helicase RuvA [Dehalococcoides ethenogenes
195]
Length = 194
Score = 41.1 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
M + + + + I ++L+ IPG G ++A R L L
Sbjct: 89 MLSAMNAEALASAIISGNTELLSTIPGVGKKTASRIVLEL 128
>gi|300723091|ref|YP_003712389.1| Holliday junction helicase subunit A [Xenorhabdus nematophila ATCC
19061]
gi|297629606|emb|CBJ90209.1| Holliday junction helicase, subunit A [Xenorhabdus nematophila ATCC
19061]
Length = 205
Score = 41.1 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVTAIEQEAIASLVKLPGVGKKTAERLV 125
>gi|320093778|ref|ZP_08025625.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp.
oral taxon 178 str. F0338]
gi|319979279|gb|EFW10775.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp.
oral taxon 178 str. F0338]
Length = 199
Score = 41.1 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 14 IKILARIPGFGPRSARRATL 33
I L +IPG G +SA+R L
Sbjct: 106 IATLQKIPGVGRKSAQRMAL 125
>gi|293192652|ref|ZP_06609606.1| holliday junction DNA helicase RuvA [Actinomyces odontolyticus
F0309]
gi|292820159|gb|EFF79156.1| holliday junction DNA helicase RuvA [Actinomyces odontolyticus
F0309]
Length = 207
Score = 41.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 15 KILARIPGFGPRSARRATLHL 35
L RIPG G +SA+R L +
Sbjct: 113 SALQRIPGVGKKSAQRMALEI 133
>gi|308048622|ref|YP_003912188.1| DNA-directed DNA polymerase [Ferrimonas balearica DSM 9799]
gi|307630812|gb|ADN75114.1| DNA-directed DNA polymerase [Ferrimonas balearica DSM 9799]
Length = 356
Score = 41.1 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 17 LARIPGFGPRSARRATLHLVK 37
L +IPG GP++A R H ++
Sbjct: 184 LRKIPGVGPKTAERLASHGLQ 204
>gi|319786205|ref|YP_004145680.1| Holliday junction DNA helicase RuvA [Pseudoxanthomonas suwonensis
11-1]
gi|317464717|gb|ADV26449.1| Holliday junction DNA helicase RuvA [Pseudoxanthomonas suwonensis
11-1]
Length = 196
Score = 41.1 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 9/44 (20%)
Query: 9 EIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
E L++ L RIPG G ++A R + L LA
Sbjct: 97 EFARLVQAGDVTALTRIPGIGKKTAERMVVEL----RDRAADLA 136
>gi|84496343|ref|ZP_00995197.1| DNA recombination protein, RuvA [Janibacter sp. HTCC2649]
gi|84383111|gb|EAP98992.1| DNA recombination protein, RuvA [Janibacter sp. HTCC2649]
Length = 201
Score = 40.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 17 LARIPGFGPRSARRATLHLVKK-------KEQLLGPLAEAMANIYNK 56
L +IPG G +SA R L L K + P A ++ +
Sbjct: 109 LTKIPGVGKKSAERLVLELKDKVGMPSGSPGADVTPSAASLGDAKRD 155
>gi|206889338|ref|YP_002248715.1| holliday junction DNA helicase RuvA [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|226698744|sp|B5YKF0|RUVA_THEYD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|206741276|gb|ACI20333.1| holliday junction DNA helicase RuvA [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 190
Score = 40.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK L++IPG G ++A+R L L
Sbjct: 106 IKSLSKIPGIGKKTAQRILLEL 127
>gi|255656790|ref|ZP_05402199.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-23m63]
gi|296452380|ref|ZP_06894081.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium
difficile NAP08]
gi|296877729|ref|ZP_06901756.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium
difficile NAP07]
gi|296258710|gb|EFH05604.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium
difficile NAP08]
gi|296431262|gb|EFH17082.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium
difficile NAP07]
Length = 200
Score = 40.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 23/79 (29%), Gaps = 24/79 (30%)
Query: 14 IKILARIPGFGPRSARRATLH----------------------LVKKKE--QLLGPLAEA 49
I L++ PG G ++A R L L+ + E L L
Sbjct: 106 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 165
Query: 50 MANIYNKVCLCSICGNVDT 68
+A V C G
Sbjct: 166 LAESKEAVQKCKKDGMNTE 184
>gi|290475277|ref|YP_003468165.1| Holliday junction helicase subunit A [Xenorhabdus bovienii SS-2004]
gi|289174598|emb|CBJ81392.1| Holliday junction helicase, subunit A [Xenorhabdus bovienii
SS-2004]
Length = 205
Score = 40.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVTAIEQEAITSLVKLPGVGKKTAERLV 125
>gi|224372976|ref|YP_002607348.1| holliday junction DNA helicase RuvA [Nautilia profundicola AmH]
gi|254767379|sp|B9L9P0|RUVA_NAUPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|223589102|gb|ACM92838.1| holliday junction DNA helicase RuvA [Nautilia profundicola AmH]
Length = 184
Score = 40.7 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLL 43
I L +IPG GP+SA+R L++ E +
Sbjct: 104 INALKKIPGIGPKSAKRI---LMEMGEFEV 130
>gi|37526027|ref|NP_929371.1| Holliday junction DNA helicase motor protein [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|44888380|sp|Q7N548|RUVA_PHOLL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|36785457|emb|CAE14404.1| Holliday junction DNA helicase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 205
Score = 40.7 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIEN-LIKILARIPGFGPRSARRAT 32
M + IE I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAIEREAIVSLVKLPGVGKKTAERLV 125
>gi|126700422|ref|YP_001089319.1| Holliday junction DNA helicase RuvA [Clostridium difficile 630]
Length = 203
Score = 40.7 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 24/79 (30%)
Query: 14 IKILARIPGFGPRSARRATLH----------------------LVKKKE--QLLGPLAEA 49
I L++ PG G ++A R L L+ + E L L
Sbjct: 109 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 168
Query: 50 MANIYNKVCLCSICGNVDT 68
++ V C G
Sbjct: 169 LSESKEAVQKCKKDGMNTE 187
>gi|255101977|ref|ZP_05330954.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-63q42]
gi|255307845|ref|ZP_05352016.1| Holliday junction DNA helicase RuvA [Clostridium difficile ATCC
43255]
gi|328887746|emb|CAJ69694.2| Holliday junction ATP-dependent DNA helicase RuvA [Clostridium
difficile]
Length = 200
Score = 40.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 24/79 (30%)
Query: 14 IKILARIPGFGPRSARRATLH----------------------LVKKKE--QLLGPLAEA 49
I L++ PG G ++A R L L+ + E L L
Sbjct: 106 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 165
Query: 50 MANIYNKVCLCSICGNVDT 68
++ V C G
Sbjct: 166 LSESKEAVQKCKKDGMNTE 184
>gi|254976401|ref|ZP_05272873.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-66c26]
gi|255093787|ref|ZP_05323265.1| Holliday junction DNA helicase RuvA [Clostridium difficile CIP
107932]
gi|255315538|ref|ZP_05357121.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-76w55]
gi|255518201|ref|ZP_05385877.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-97b34]
gi|255651317|ref|ZP_05398219.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-37x79]
gi|260684381|ref|YP_003215666.1| Holliday junction DNA helicase RuvA [Clostridium difficile CD196]
gi|260688040|ref|YP_003219174.1| Holliday junction DNA helicase RuvA [Clostridium difficile R20291]
gi|306521149|ref|ZP_07407496.1| Holliday junction DNA helicase RuvA [Clostridium difficile
QCD-32g58]
gi|260210544|emb|CBA65075.1| holliday junction DNA helicase [Clostridium difficile CD196]
gi|260214057|emb|CBE06222.1| holliday junction DNA helicase [Clostridium difficile R20291]
Length = 200
Score = 40.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 24/79 (30%)
Query: 14 IKILARIPGFGPRSARRATLH----------------------LVKKKE--QLLGPLAEA 49
I L++ PG G ++A R L L+ + E L L
Sbjct: 106 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 165
Query: 50 MANIYNKVCLCSICGNVDT 68
++ V C G
Sbjct: 166 LSESKEAVQKCKKDGMNTE 184
>gi|295426274|ref|ZP_06818934.1| DNA topoisomerase TopA [Lactobacillus amylolyticus DSM 11664]
gi|295064013|gb|EFG54961.1| DNA topoisomerase TopA [Lactobacillus amylolyticus DSM 11664]
Length = 702
Score = 40.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 19/102 (18%)
Query: 79 QRDASVIIVVEDVADLWALERSKAVNALYHVLG--GSLSPL----------DRIGPEDIG 126
++ +++VE A +E+ N YHV+ G + L + P+ I
Sbjct: 12 SKNKKTLVIVESPAKAKTIEKYLGHN--YHVIASKGHIRDLPKSQMGIDFDNNYKPKYIS 69
Query: 127 IQS-----LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
I+ + E KK +++ A EG+ A +I L
Sbjct: 70 IRGKGDTIKELKSEAKKAKDVYLASDPDREGEAIAWHIAHAL 111
>gi|239618103|ref|YP_002941425.1| RuvA domain protein [Kosmotoga olearia TBF 19.5.1]
gi|259495648|sp|C5CFS3|RUVA_KOSOT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|239506934|gb|ACR80421.1| RuvA domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 195
Score = 40.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 1 MQKKI-TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
M +K+ K+ I L+R+PG G ++A R L + + ++++
Sbjct: 97 MLQKMIASKD----ISGLSRLPGLGKKTAERLVSELYDLVKDYAVEFPKELSDVSED 149
>gi|315038211|ref|YP_004031779.1| DNA topoisomerase I [Lactobacillus amylovorus GRL 1112]
gi|325956665|ref|YP_004292077.1| DNA topoisomerase I [Lactobacillus acidophilus 30SC]
gi|312276344|gb|ADQ58984.1| DNA topoisomerase I [Lactobacillus amylovorus GRL 1112]
gi|325333230|gb|ADZ07138.1| DNA topoisomerase I [Lactobacillus acidophilus 30SC]
gi|327183488|gb|AEA31935.1| DNA topoisomerase I [Lactobacillus amylovorus GRL 1118]
Length = 705
Score = 40.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 21/98 (21%)
Query: 84 VIIVVEDVADLWALERSKAVNAL-YHVLG--GSLSPL----------DRIGPEDIGIQS- 129
+++VE A +E+ YHV+ G + L D P+ I I+
Sbjct: 17 TLVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFDDNYKPKYISIRGK 73
Query: 130 ----LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +E+ A EG+ A ++ L
Sbjct: 74 GDTIKELKSEAKKAKEVYLASDPDREGEAIAWHVAHAL 111
>gi|154508894|ref|ZP_02044536.1| hypothetical protein ACTODO_01405 [Actinomyces odontolyticus ATCC
17982]
gi|153798528|gb|EDN80948.1| hypothetical protein ACTODO_01405 [Actinomyces odontolyticus ATCC
17982]
Length = 207
Score = 40.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G +SA+R L +
Sbjct: 115 LQRIPGVGKKSAQRMALEI 133
>gi|94677012|ref|YP_588762.1| Holliday junction DNA helicase RuvA [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
gi|123081488|sp|Q1LTF2|RUVA_BAUCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|94220162|gb|ABF14321.1| Holliday junction DNA helicase RuvA [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
Length = 196
Score = 40.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRATLHLVKKKEQL 42
M +K IE N I +L ++PG G ++A R ++ K++L
Sbjct: 93 MSEKQFLSAIEHNEIHMLTKLPGVGKKTAERLV---IEMKDKL 132
>gi|58337278|ref|YP_193863.1| DNA topoisomerase I [Lactobacillus acidophilus NCFM]
gi|227903864|ref|ZP_04021669.1| DNA topoisomerase I [Lactobacillus acidophilus ATCC 4796]
gi|58254595|gb|AAV42832.1| DNA topoisomerase I [Lactobacillus acidophilus NCFM]
gi|227868255|gb|EEJ75676.1| DNA topoisomerase I [Lactobacillus acidophilus ATCC 4796]
Length = 705
Score = 40.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 21/98 (21%)
Query: 84 VIIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQS- 129
++++VE A +E+ YHV+ + D P+ I I+
Sbjct: 17 ILVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFEDNYKPKYISIRGK 73
Query: 130 ----LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +E+ A EG+ A ++ L
Sbjct: 74 GDTIKELKSEAKKAKEVYLASDPDREGEAIAWHVAHAL 111
>gi|114776334|ref|ZP_01451379.1| putative Holliday junction DNA helicase RuvA [Mariprofundus
ferrooxydans PV-1]
gi|114553164|gb|EAU55562.1| putative Holliday junction DNA helicase RuvA [Mariprofundus
ferrooxydans PV-1]
Length = 188
Score = 40.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 5 ITGKEIENLIKIL--------ARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
+ G IE LI + AR PG G ++A+R L L K + A++N ++
Sbjct: 90 MGGMSIEELIGAIEHADDLAIARTPGIGKKTAQRLILELQGKLGSVAAEGGAAISNKADE 149
Query: 57 VC 58
V
Sbjct: 150 VR 151
>gi|307545151|ref|YP_003897630.1| Holliday junction DNA helicase motor protein [Halomonas elongata
DSM 2581]
gi|307217175|emb|CBV42445.1| Holliday junction DNA helicase motor protein [Halomonas elongata
DSM 2581]
Length = 203
Score = 40.0 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 14 IKILARIPGFGPRSARRAT 32
IK L R+PG G ++A R
Sbjct: 107 IKALTRLPGVGKKTAERLV 125
>gi|332977850|gb|EGK14603.1| crossover junction ATP-dependent DNA helicase RuvA [Desmospora sp.
8437]
Length = 204
Score = 40.0 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 17 LARIPGFGPRSARRATLHL 35
L ++PG G ++A+R L L
Sbjct: 107 LTKLPGVGKKTAQRIVLDL 125
>gi|227825064|ref|ZP_03989896.1| holliday junction DNA helicase ruvA [Acidaminococcus sp. D21]
gi|226905563|gb|EEH91481.1| holliday junction DNA helicase ruvA [Acidaminococcus sp. D21]
Length = 201
Score = 40.0 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L ++PG G ++A R L L
Sbjct: 106 VKFLTKLPGIGKKTAERMLLEL 127
>gi|163846991|ref|YP_001635035.1| Holliday junction DNA helicase RuvA [Chloroflexus aurantiacus
J-10-fl]
gi|222524813|ref|YP_002569284.1| Holliday junction DNA helicase RuvA [Chloroflexus sp. Y-400-fl]
gi|189045746|sp|A9WA87|RUVA_CHLAA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254766952|sp|B9LCT8|RUVA_CHLSY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|163668280|gb|ABY34646.1| Holliday junction DNA helicase RuvA [Chloroflexus aurantiacus
J-10-fl]
gi|222448692|gb|ACM52958.1| Holliday junction DNA helicase RuvA [Chloroflexus sp. Y-400-fl]
Length = 195
Score = 40.0 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHL 35
QK I G +I L AR+PG G ++A R L L
Sbjct: 99 QKSIAGGDIARL----ARVPGIGKKTAERIVLEL 128
>gi|92113970|ref|YP_573898.1| Holliday junction DNA helicase subunit RuvA [Chromohalobacter
salexigens DSM 3043]
gi|91797060|gb|ABE59199.1| Holliday junction DNA helicase subunit RuvA [Chromohalobacter
salexigens DSM 3043]
Length = 206
Score = 40.0 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 14 IKILARIPGFGPRSARRAT 32
IK L R+PG G ++A R
Sbjct: 109 IKALTRLPGVGKKTAERLV 127
>gi|229470526|sp|B4RTT9|RUVA_ALTMD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
Length = 206
Score = 40.0 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
+ LA +PG G ++A R + L + L +A
Sbjct: 107 VSALASLPGIGKKTAERLVVEL----KDRLAKFGKA 138
>gi|160881248|ref|YP_001560216.1| rubrerythrin [Clostridium phytofermentans ISDg]
gi|160429914|gb|ABX43477.1| Rubrerythrin [Clostridium phytofermentans ISDg]
Length = 184
Score = 40.0 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 12/63 (19%)
Query: 24 GPRSARRATLHL-VKKKEQLLGPLAEAMANIYN-------KVCLCSICGN--VDTT-DPC 72
G + A+R + H ++ ++ A+A V +C +CG+ +D D C
Sbjct: 113 GEKGAQR-SFHFALEAEKIHADMFAKAQECAKEGKDMEFTSVHICPVCGHTILDDAPDNC 171
Query: 73 AIC 75
+C
Sbjct: 172 PVC 174
>gi|332712357|ref|ZP_08432284.1| holliday junction DNA helicase subunit RuvA [Lyngbya majuscula 3L]
gi|332348831|gb|EGJ28444.1| holliday junction DNA helicase subunit RuvA [Lyngbya majuscula 3L]
Length = 211
Score = 40.0 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I+ L++ PG G ++A R L L
Sbjct: 114 IRALSKTPGVGSKTAERIALEL 135
>gi|312897339|ref|ZP_07756765.1| Holliday junction DNA helicase RuvA [Megasphaera micronuciformis
F0359]
gi|310621557|gb|EFQ05091.1| Holliday junction DNA helicase RuvA [Megasphaera micronuciformis
F0359]
Length = 199
Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I +L ++PG G ++A R L L
Sbjct: 106 IGLLTKMPGIGKKTAERIVLEL 127
>gi|315604284|ref|ZP_07879350.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp.
oral taxon 180 str. F0310]
gi|315313990|gb|EFU62041.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 201
Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G +SA+R L +
Sbjct: 109 LQRIPGVGKKSAQRMALEI 127
>gi|256832601|ref|YP_003161328.1| Holliday junction DNA helicase RuvA [Jonesia denitrificans DSM
20603]
gi|256686132|gb|ACV09025.1| Holliday junction DNA helicase RuvA [Jonesia denitrificans DSM
20603]
Length = 205
Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK L ++PG GP+ A+R L L
Sbjct: 106 IKALTKVPGIGPKVAQRIVLEL 127
>gi|304440231|ref|ZP_07400121.1| crossover junction ATP-dependent DNA helicase RuvA [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304371280|gb|EFM24896.1| crossover junction ATP-dependent DNA helicase RuvA [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 193
Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
+K L + PG G ++A R +++ K++++ + + ++ V
Sbjct: 106 VKSLTKAPGVGKKTAERI---ILELKDRIVKIFGDFIPDVKESV 146
>gi|317486836|ref|ZP_07945651.1| DNA topoisomerase I [Bilophila wadsworthia 3_1_6]
gi|316921912|gb|EFV43183.1| DNA topoisomerase I [Bilophila wadsworthia 3_1_6]
Length = 755
Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 37/107 (34%), Gaps = 21/107 (19%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGSLS----PLDRIG--------PEDIGIQSLI 131
+I+VE A + + K Y V P IG PE IQ
Sbjct: 5 LIIVESPAKVKTI---KKFLGPGYLVQASVGHIRDLPKSNIGVDEANDFAPEYEIIQGKE 61
Query: 132 E-----RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+ R K+ + A EG+ A ++ + LK + I R+
Sbjct: 62 KVVQSLRDAASKVDTVFLAPDPDREGEAIAWHVAELLKDKNPNIKRI 108
>gi|52841519|ref|YP_095318.1| Holliday junction DNA helicase RuvA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|81377601|sp|Q5ZW00|RUVA_LEGPH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|52628630|gb|AAU27371.1| Holliday junction DNA helicase RuvA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 199
Score = 39.6 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRAT 32
I+ KE I L ++PG G ++A R
Sbjct: 92 SSISPKEFIQCIHQENAALLTKLPGIGKKTAERLV 126
>gi|319938037|ref|ZP_08012437.1| hypothetical protein HMPREF9488_03273 [Coprobacillus sp. 29_1]
gi|319806943|gb|EFW03582.1| hypothetical protein HMPREF9488_03273 [Coprobacillus sp. 29_1]
Length = 718
Score = 39.6 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 15/73 (20%)
Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189
L E ++ K I E+I A EGQ I LK I+V +TR+ ++++
Sbjct: 98 LKELVKRKDIDEIIVATDPDREGQLIWELIARNLK-INVPVTRI-----------WINEW 145
Query: 190 T---IFEAIRSRT 199
T + +A R
Sbjct: 146 TEASLIKAFHGRK 158
>gi|222055417|ref|YP_002537779.1| Holliday junction DNA helicase RuvA [Geobacter sp. FRC-32]
gi|254766963|sp|B9LZC5|RUVA_GEOSF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|221564706|gb|ACM20678.1| Holliday junction DNA helicase RuvA [Geobacter sp. FRC-32]
Length = 199
Score = 39.6 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
LA IPG G ++A R L L + + L
Sbjct: 110 LATIPGIGKKTAERLVLEL----REKVKKLGH 137
>gi|117923791|ref|YP_864408.1| Holliday junction DNA helicase RuvA [Magnetococcus sp. MC-1]
gi|166230563|sp|A0L4V9|RUVA_MAGSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|117607547|gb|ABK43002.1| Holliday junction DNA helicase subunit RuvA [Magnetococcus sp.
MC-1]
Length = 204
Score = 39.6 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 13/54 (24%)
Query: 11 ENLIKILAR--------IPGFGPRSARRATLHLVKKKEQLLGPLAE---AMANI 53
E L+ L+R IPG G ++A+R + L K + P+A A+
Sbjct: 96 EALLTALSREDLTLLCTIPGVGKKTAQRMAMEL--KDKLGALPMAAPTTAIGAA 147
>gi|54294187|ref|YP_126602.1| holliday junction DNA helicase [Legionella pneumophila str. Lens]
gi|54297206|ref|YP_123575.1| Holliday junction DNA helicase RuvA [Legionella pneumophila str.
Paris]
gi|148358830|ref|YP_001250037.1| Holliday junction DNA helicase RuvA [Legionella pneumophila str.
Corby]
gi|296106875|ref|YP_003618575.1| holliday junction DNA helicase RuvA [Legionella pneumophila 2300/99
Alcoy]
gi|81368758|sp|Q5WX47|RUVA_LEGPL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|81370703|sp|Q5X5R9|RUVA_LEGPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230562|sp|A5IBE1|RUVA_LEGPC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|53750991|emb|CAH12402.1| holliday junction DNA helicase [Legionella pneumophila str. Paris]
gi|53754019|emb|CAH15490.1| holliday junction DNA helicase [Legionella pneumophila str. Lens]
gi|148280603|gb|ABQ54691.1| Holliday junction DNA helicase RuvA [Legionella pneumophila str.
Corby]
gi|295648776|gb|ADG24623.1| holliday junction DNA helicase RuvA [Legionella pneumophila 2300/99
Alcoy]
gi|307610000|emb|CBW99532.1| holliday junction DNA helicase [Legionella pneumophila 130b]
Length = 199
Score = 39.6 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRAT 32
I+ KE I L ++PG G ++A R
Sbjct: 92 SSISPKEFIQCIHQENAALLTKLPGIGKKTAERLV 126
>gi|323142288|ref|ZP_08077120.1| Holliday junction DNA helicase RuvA [Phascolarctobacterium sp. YIT
12067]
gi|322413172|gb|EFY04059.1| Holliday junction DNA helicase RuvA [Phascolarctobacterium sp. YIT
12067]
Length = 200
Score = 39.6 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
IK+L ++PG G ++A R L L K + A++
Sbjct: 107 IKVLTKLPGIGKKTAERLLLELKDKVGPVAAESADSFGEAVA 148
>gi|51892298|ref|YP_074989.1| Holliday junction DNA helicase RuvA [Symbiobacterium thermophilum
IAM 14863]
gi|81389173|sp|Q67Q98|RUVA_SYMTH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|51855987|dbj|BAD40145.1| Holliday junction DNA helicase RuvA [Symbiobacterium thermophilum
IAM 14863]
Length = 205
Score = 39.6 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHL 35
E+L + R+PG G ++A+R L L
Sbjct: 103 AFEDL-DAICRVPGIGRKTAQRLVLEL 128
>gi|94264074|ref|ZP_01287873.1| DNA recombination protein, RuvA:Helix-hairpin-helix motif [delta
proteobacterium MLMS-1]
gi|93455490|gb|EAT05680.1| DNA recombination protein, RuvA:Helix-hairpin-helix motif [delta
proteobacterium MLMS-1]
Length = 212
Score = 39.6 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L ++PG G ++A R L L
Sbjct: 107 IAGLKKLPGVGKKTAERLCLEL 128
>gi|303258188|ref|ZP_07344195.1| holliday junction DNA helicase RuvA [Burkholderiales bacterium
1_1_47]
gi|302858941|gb|EFL82025.1| holliday junction DNA helicase RuvA [Burkholderiales bacterium
1_1_47]
Length = 189
Score = 39.6 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M ++ ++I N I +L +PG G ++A R L L
Sbjct: 89 MLSSMSAEDIGNAIANNEIGLLTMVPGIGKKTAERLVLEL 128
>gi|331000258|ref|ZP_08323942.1| Holliday junction DNA helicase RuvA [Parasutterella
excrementihominis YIT 11859]
gi|329572424|gb|EGG54077.1| Holliday junction DNA helicase RuvA [Parasutterella
excrementihominis YIT 11859]
Length = 189
Score = 39.6 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M ++ ++I N I +L +PG G ++A R L L
Sbjct: 89 MLSSMSAEDIGNAIANNEIGLLTMVPGIGKKTAERLVLEL 128
>gi|284007614|emb|CBA73228.1| Holliday junction ATP-dependent DNA helicase [Arsenophonus
nasoniae]
Length = 204
Score = 39.6 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 11 ENLIKILARIPGFGPRSARRAT 32
+ I L ++PG G ++A R
Sbjct: 104 QEAIASLVKLPGVGKKTAERLV 125
>gi|206901797|ref|YP_002251235.1| DNA topoisomerase I [Dictyoglomus thermophilum H-6-12]
gi|206740900|gb|ACI19958.1| DNA topoisomerase I [Dictyoglomus thermophilum H-6-12]
Length = 694
Score = 39.6 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 23/111 (20%)
Query: 82 ASVIIVVEDVADLWALERS--KAVNALYHVLGGSLS----PLDRIGPEDIG-----IQSL 130
+I+VE A +E+ K VL P +G + L
Sbjct: 3 KEKLIIVESPAKAKTIEKILGKDFK----VLASYGHIRDLPEKELGVDIENGFKPKYVLL 58
Query: 131 IER--------IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
R KK+ +L A EG+ A ++++ LK K TR+
Sbjct: 59 PSRKKIIDTIKDLSKKVEKLYLATDPDREGEAIAWHLVETLKLPKDKFTRI 109
>gi|134097687|ref|YP_001103348.1| NADH pyrophosphatase [Saccharopolyspora erythraea NRRL 2338]
gi|291006354|ref|ZP_06564327.1| NADH pyrophosphatase [Saccharopolyspora erythraea NRRL 2338]
gi|133910310|emb|CAM00423.1| NADH pyrophosphatase [Saccharopolyspora erythraea NRRL 2338]
Length = 278
Score = 39.6 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP------CAIC---IDQQRDASVI 85
L+ + L A A+ ++ C+ CG T C C + D S+I
Sbjct: 83 LLNDTDAGLLTTAVALLGWHDNARYCARCGAATTRAQSGWVRRCTGCDREEYPRTDPSMI 142
Query: 86 IVVEDVADLWALERSKAVNA-LYHVLGGSLS 115
+V D AD L R + A Y VL G +
Sbjct: 143 CLVHDGADHVLLARQPSWPADRYSVLAGFVE 173
>gi|270157092|ref|ZP_06185749.1| Holliday junction DNA helicase RuvA [Legionella longbeachae D-4968]
gi|289164497|ref|YP_003454635.1| holliday junction DNA helicase [Legionella longbeachae NSW150]
gi|269989117|gb|EEZ95371.1| Holliday junction DNA helicase RuvA [Legionella longbeachae D-4968]
gi|288857670|emb|CBJ11513.1| holliday junction DNA helicase [Legionella longbeachae NSW150]
Length = 198
Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRAT 32
IT E I+ L ++PG G ++A R
Sbjct: 92 SSITPNEFIECIQQENAVFLMKLPGIGKKTAERLV 126
>gi|285808235|gb|ADC35769.1| Holliday junction DNA helicase RuvA [uncultured bacterium 293]
Length = 198
Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKILA--------RIPGFGPRSARRATLHL 35
++G E + LI+ L RIPG G ++A R L L
Sbjct: 90 LSGIETDELIQALRGGDLARLTRIPGVGRKTAERLVLEL 128
>gi|150020803|ref|YP_001306157.1| Holliday junction DNA helicase RuvA [Thermosipho melanesiensis
BI429]
gi|166231454|sp|A6LLH1|RUVA_THEM4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|149793324|gb|ABR30772.1| Holliday junction DNA helicase RuvA [Thermosipho melanesiensis
BI429]
Length = 189
Score = 39.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query: 14 IKILARIPGFGPRSARRATLHL----------VKKKEQLLGPLAEAMANI 53
+K L+ +PG GP++A R L L + +K++ + EA+ +
Sbjct: 106 VKTLSTLPGIGPKTAERIILELKDSMKEFDVTLTEKDKKILEAIEALVTL 155
>gi|221632653|ref|YP_002521874.1| Holliday junction DNA helicase RuvA [Thermomicrobium roseum DSM
5159]
gi|254767395|sp|B9KYT2|RUVA_THERP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|221156321|gb|ACM05448.1| Holliday junction DNA helicase RuvA [Thermomicrobium roseum DSM
5159]
Length = 191
Score = 39.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I+ LAR PG G ++A R L L
Sbjct: 107 IEELARAPGIGKKTASRIVLEL 128
>gi|21232455|ref|NP_638372.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767461|ref|YP_242223.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990567|ref|YP_001902577.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
campestris str. B100]
gi|325921870|ref|ZP_08183684.1| Holliday junction DNA helicase RuvA [Xanthomonas gardneri ATCC
19865]
gi|24212373|sp|Q8P6E5|RUVA_XANCP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|81306559|sp|Q4UXM0|RUVA_XANC8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560138|sp|B0RPY4|RUVA_XANCB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|21114237|gb|AAM42296.1| holliday junction binding protein, DNA helicase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66572793|gb|AAY48203.1| holliday junction binding protein, DNA helicase [Xanthomonas
campestris pv. campestris str. 8004]
gi|167732327|emb|CAP50519.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
campestris]
gi|325547651|gb|EGD18691.1| Holliday junction DNA helicase RuvA [Xanthomonas gardneri ATCC
19865]
Length = 194
Score = 39.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
+T E LI L RIPG G ++A R + L
Sbjct: 93 VTVDEFARLITSGDITALTRIPGIGKKTAERMVVEL 128
>gi|188586412|ref|YP_001917957.1| Holliday junction DNA helicase RuvA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229560108|sp|B2A5L5|RUVA_NATTJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|179351099|gb|ACB85369.1| Holliday junction DNA helicase RuvA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 214
Score = 39.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHL 35
+ + + + L ++PG G +SA+R L L
Sbjct: 95 PTEFYLSVLNDQVNQLTKVPGIGKKSAQRIILEL 128
>gi|118594338|ref|ZP_01551685.1| Holliday junction DNA helicase RuvA [Methylophilales bacterium
HTCC2181]
gi|118440116|gb|EAV46743.1| Holliday junction DNA helicase RuvA [Methylophilales bacterium
HTCC2181]
Length = 193
Score = 39.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I +L +IPG G ++A R L L
Sbjct: 107 INMLVKIPGIGKKTAERLVLEL 128
>gi|126656681|ref|ZP_01727895.1| Holliday junction DNA helicase motor protein [Cyanothece sp.
CCY0110]
gi|126621901|gb|EAZ92609.1| Holliday junction DNA helicase motor protein [Cyanothece sp.
CCY0110]
Length = 212
Score = 39.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
+E L++ L++ PG G ++A R L L
Sbjct: 101 LEELVQAIVTGNIRILSQTPGIGKKTAERIALEL 134
>gi|166712990|ref|ZP_02244197.1| Holliday junction DNA helicase motor protein [Xanthomonas oryzae
pv. oryzicola BLS256]
gi|289661899|ref|ZP_06483480.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289669612|ref|ZP_06490687.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 194
Score = 39.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
+T E LI L RIPG G ++A R + L
Sbjct: 93 VTVDEFARLITSGDITALTRIPGIGKKTAERMVVEL 128
>gi|227893505|ref|ZP_04011310.1| DNA topoisomerase I [Lactobacillus ultunensis DSM 16047]
gi|227864675|gb|EEJ72096.1| DNA topoisomerase I [Lactobacillus ultunensis DSM 16047]
Length = 705
Score = 39.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLG--GSLSPL----------DRIGPEDIGIQS-- 129
+++VE A +E+ YHV+ G + L D P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFDDNYKPKYISIRGKG 74
Query: 130 ---LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +E+ A EG+ A ++ L
Sbjct: 75 DTIKELKSEAKKAKEVYLASDPDREGEAIAWHVAHAL 111
>gi|307326761|ref|ZP_07605953.1| Holliday junction DNA helicase RuvA [Streptomyces violaceusniger Tu
4113]
gi|306887524|gb|EFN18518.1| Holliday junction DNA helicase RuvA [Streptomyces violaceusniger Tu
4113]
Length = 206
Score = 39.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
K L +PG G + A+R L++ K++L PL A+ + +
Sbjct: 107 KALTAVPGIGKKGAQRL---LLELKDRLGEPLGSAVPSARS 144
>gi|325917782|ref|ZP_08179966.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas
vesicatoria ATCC 35937]
gi|325535998|gb|EGD07810.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas
vesicatoria ATCC 35937]
Length = 194
Score = 39.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L RIPG G ++A R + L
Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128
>gi|149194599|ref|ZP_01871695.1| Holliday junction DNA helicase motor protein [Caminibacter
mediatlanticus TB-2]
gi|149135343|gb|EDM23823.1| Holliday junction DNA helicase motor protein [Caminibacter
mediatlanticus TB-2]
Length = 180
Score = 39.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
I L ++PG GP+SA+R L++ + + + ++ +
Sbjct: 103 INSLKKVPGIGPKSAKRI---LMEMGDFEIENINPIISQAVTAL 143
>gi|226329884|ref|ZP_03805402.1| hypothetical protein PROPEN_03797 [Proteus penneri ATCC 35198]
gi|225200679|gb|EEG83033.1| hypothetical protein PROPEN_03797 [Proteus penneri ATCC 35198]
Length = 206
Score = 39.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIEN-LIKILARIPGFGPRSARRAT 32
M + IEN I L ++PG G ++A R
Sbjct: 94 MSARQFVTAIENESISSLVKLPGVGKKTAERLV 126
>gi|255327194|ref|ZP_05368269.1| holliday junction DNA helicase RuvA [Rothia mucilaginosa ATCC
25296]
gi|255295812|gb|EET75154.1| holliday junction DNA helicase RuvA [Rothia mucilaginosa ATCC
25296]
Length = 206
Score = 39.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 6 TGKEIENLI-----KILARIPGFGPRSARRATLHL-----VKKKEQLLGPLAEAMA 51
T E+E + K ++PG GP+ ARR L L + + PL++ +
Sbjct: 93 TAAEVERAVATGDDKAFTKVPGIGPKGARRIVLELAGKLILSDGQTDELPLSQGIV 148
>gi|197284986|ref|YP_002150858.1| Holliday junction DNA helicase RuvA [Proteus mirabilis HI4320]
gi|227355390|ref|ZP_03839791.1| Holliday junction ATP-dependent DNA helicase [Proteus mirabilis
ATCC 29906]
gi|229560118|sp|B4ETP7|RUVA_PROMH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|194682473|emb|CAR42407.1| Holliday junction ATP-dependent DNA helicase [Proteus mirabilis
HI4320]
gi|227164614|gb|EEI49485.1| Holliday junction ATP-dependent DNA helicase [Proteus mirabilis
ATCC 29906]
Length = 207
Score = 39.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIEN-LIKILARIPGFGPRSARRAT 32
M + IEN I L ++PG G ++A R
Sbjct: 94 MSARQFVTAIENESISSLVKLPGVGKKTAERLV 126
>gi|307130888|ref|YP_003882904.1| component of RuvABC resolvasome, regulatory subunit [Dickeya
dadantii 3937]
gi|306528417|gb|ADM98347.1| component of RuvABC resolvasome, regulatory subunit [Dickeya
dadantii 3937]
Length = 205
Score = 39.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 INALVKLPGVGKKTAERLV 125
>gi|159899035|ref|YP_001545282.1| Holliday junction DNA helicase RuvA [Herpetosiphon aurantiacus ATCC
23779]
gi|229560066|sp|A9AZL0|RUVA_HERA2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|159892074|gb|ABX05154.1| Holliday junction DNA helicase RuvA [Herpetosiphon aurantiacus ATCC
23779]
Length = 197
Score = 39.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
T +E+++ I +L+++PG G ++A R L L
Sbjct: 94 TPEELQHAIAREDITMLSKVPGIGKKTAARLVLEL 128
>gi|291545898|emb|CBL19006.1| Holliday junction resolvasome, DNA-binding subunit [Ruminococcus
sp. SR1/5]
Length = 134
Score = 39.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYN 55
+K +++ PG G ++A++ L L +K ++ LA
Sbjct: 37 VKTISKAPGIGKKTAQKMILELKDKLKLEDAFEMKLAHQQEEAAE 81
>gi|84623202|ref|YP_450574.1| Holliday junction DNA helicase motor protein [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|161899002|ref|YP_200300.2| Holliday junction DNA helicase RuvA [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188577435|ref|YP_001914364.1| Holliday junction DNA helicase RuvA [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|90146231|sp|Q5H2A6|RUVA_XANOR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123725563|sp|Q2P577|RUVA_XANOM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560139|sp|B2STK2|RUVA_XANOP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|84367142|dbj|BAE68300.1| holliday junction binding protein DNA helicase [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188521887|gb|ACD59832.1| holliday junction DNA helicase RuvA [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 194
Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
+T E LI L RIPG G ++A R + L
Sbjct: 93 VTVDEFARLITSGDITALTRIPGIGKKTAERMVVEL 128
>gi|21243875|ref|NP_643457.1| Holliday junction DNA helicase RuvA [Xanthomonas axonopodis pv.
citri str. 306]
gi|294626863|ref|ZP_06705455.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294665404|ref|ZP_06730692.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|24212375|sp|Q8PHV0|RUVA_XANAC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|21109477|gb|AAM37993.1| holliday junction binding protein DNA helicase [Xanthomonas
axonopodis pv. citri str. 306]
gi|292598877|gb|EFF43022.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292604815|gb|EFF48178.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 194
Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L RIPG G ++A R + L
Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128
>gi|226498646|ref|NP_001141776.1| hypothetical protein LOC100273912 [Zea mays]
gi|194705894|gb|ACF87031.1| unknown [Zea mays]
Length = 419
Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKK 39
KE+ ++I+ L +PG GP+ A L + +
Sbjct: 299 KELSDVIEALCTLPGVGPKVAACIALFSLDQN 330
>gi|85059239|ref|YP_454941.1| Holliday junction DNA helicase motor protein [Sodalis glossinidius
str. 'morsitans']
gi|123752615|sp|Q2NTI9|RUVA_SODGM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|84779759|dbj|BAE74536.1| holliday junction DNA helicase RuvA [Sodalis glossinidius str.
'morsitans']
Length = 205
Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 INALVKLPGVGKKTAERLV 125
>gi|58425878|gb|AAW74915.1| holliday junction binding protein, DNA helicase [Xanthomonas oryzae
pv. oryzae KACC10331]
Length = 212
Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
+T E LI L RIPG G ++A R + L
Sbjct: 111 VTVDEFARLITSGDITALTRIPGIGKKTAERMVVEL 146
>gi|330721244|gb|EGG99343.1| Holliday junction DNA helicase RuvA [gamma proteobacterium
IMCC2047]
Length = 197
Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNK 56
+ L ++PG G ++A R + + +K + G L ++ +
Sbjct: 107 VAALTKVPGIGKKTAERLVIEMRDKLKDWPEAPGDLQASLNSAAAD 152
>gi|297569179|ref|YP_003690523.1| Holliday junction DNA helicase RuvA [Desulfurivibrio alkaliphilus
AHT2]
gi|296925094|gb|ADH85904.1| Holliday junction DNA helicase RuvA [Desulfurivibrio alkaliphilus
AHT2]
Length = 215
Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L ++PG G ++A R L L
Sbjct: 107 IVFLKKLPGVGKKTAERLCLEL 128
>gi|114566956|ref|YP_754110.1| Holliday junction resolvasome DNA-binding subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122318040|sp|Q0AX15|RUVA_SYNWW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|114337891|gb|ABI68739.1| Holliday junction DNA helicase subunit RuvA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 199
Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 17 LARIPGFGPRSARRATLHL--------VKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68
L RIPG G ++A+R L + + E+ PL + + +
Sbjct: 110 LVRIPGVGKKTAQRMIFELQDKVPELKLVEVEKEQRPLLDELMEALEILGY-------SR 162
Query: 69 TDPCAICIDQQRDASVIIVVED 90
++ +D R+ + +VE+
Sbjct: 163 SEVLPAIMDLNRNKQLGNIVEE 184
>gi|78048836|ref|YP_365011.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929365|ref|ZP_08190495.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas perforans
91-118]
gi|90146217|sp|Q3BQF2|RUVA_XANC5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|78037266|emb|CAJ25011.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540277|gb|EGD11889.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas perforans
91-118]
Length = 194
Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L RIPG G ++A R + L
Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128
>gi|283457993|ref|YP_003362600.1| holliday junction resolvasome, DNA-binding subunit [Rothia
mucilaginosa DY-18]
gi|283134015|dbj|BAI64780.1| holliday junction resolvasome, DNA-binding subunit [Rothia
mucilaginosa DY-18]
Length = 209
Score = 38.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 6 TGKEIENLI-----KILARIPGFGPRSARRATLHL-----VKKKEQLLGPLAEAMA 51
T E+E + K ++PG GP+ ARR L L + + PL++ +
Sbjct: 96 TAAEVERAVATGDDKAFTKVPGIGPKGARRIVLELAGKLILSDGQTDELPLSQGIV 151
>gi|254281679|ref|ZP_04956647.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR51-B]
gi|219677882|gb|EED34231.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR51-B]
Length = 207
Score = 38.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
M + + ++ + L +PG G ++A R LV+ +++ L E + V
Sbjct: 93 MDAREFSRCLQRDDVASLVALPGVGKKTAERL---LVEMRDKAGKWLGELSPEMATTVG 148
>gi|78043086|ref|YP_359650.1| FdhE domain-containing protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995201|gb|ABB14100.1| fdhE domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 244
Score = 38.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
LH + + ++L L+ A+ N + C CG +
Sbjct: 109 LALHFLILRRKMLRELSNAIQNNQSNHQTCPTCGTL 144
>gi|309789628|ref|ZP_07684209.1| Holliday junction DNA helicase RuvA [Oscillochloris trichoides DG6]
gi|308228364|gb|EFO82011.1| Holliday junction DNA helicase RuvA [Oscillochloris trichoides DG6]
Length = 198
Score = 38.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 16 ILARIPGFGPRSARRATLHL 35
LAR+PG G ++A R L L
Sbjct: 109 ALARVPGIGKKTAERLVLEL 128
>gi|145300090|ref|YP_001142931.1| DNA polymerase IV [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852862|gb|ABO91183.1| DNA polymerase IV [Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 38.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 5 ITGKEIENLIKIL--ARIPGFGPRSARRA 31
I +E++ ++ L A++PG G ++A R
Sbjct: 175 IRPEEVDEFVRQLPLAKLPGIGRKTAERL 203
>gi|90408541|ref|ZP_01216698.1| holliday junction DNA helicase RuvA [Psychromonas sp. CNPT3]
gi|90310360|gb|EAS38488.1| holliday junction DNA helicase RuvA [Psychromonas sp. CNPT3]
Length = 207
Score = 38.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 11 ENLIKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 104 NEAVSQLVKLPGVGKKTAERLV 125
>gi|67922170|ref|ZP_00515685.1| DNA recombination protein, RuvA [Crocosphaera watsonii WH 8501]
gi|67856070|gb|EAM51314.1| DNA recombination protein, RuvA [Crocosphaera watsonii WH 8501]
Length = 210
Score = 38.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
+E L++ L++ PG G ++A R L L
Sbjct: 101 LEELVQAIVTGNIRTLSQTPGVGKKTAERIALEL 134
>gi|170077885|ref|YP_001734523.1| Holliday junction DNA helicase RuvA [Synechococcus sp. PCC 7002]
gi|229560135|sp|B1XL12|RUVA_SYNP2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|169885554|gb|ACA99267.1| Holliday junction DNA helicase RuvA [Synechococcus sp. PCC 7002]
Length = 209
Score = 38.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 15 KILARIPGFGPRSARRATLHL 35
+ LA+ PG G ++A R L L
Sbjct: 114 RQLAKAPGIGKKTAERLALEL 134
>gi|119774975|ref|YP_927715.1| Holliday junction DNA helicase RuvA [Shewanella amazonensis SB2B]
gi|166200259|sp|A1S6N9|RUVA_SHEAM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|119767475|gb|ABM00046.1| Holliday junction DNA helicase RuvA [Shewanella amazonensis SB2B]
Length = 205
Score = 38.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
I L ++PG G ++A R LV+ +++L + +M V
Sbjct: 107 IATLIKLPGVGKKTAERL---LVEMRDKLKSLMEASMGAEREFV 147
>gi|320535373|ref|ZP_08035487.1| DNA topoisomerase I [Treponema phagedenis F0421]
gi|320147775|gb|EFW39277.1| DNA topoisomerase I [Treponema phagedenis F0421]
Length = 716
Score = 38.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 22/108 (20%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVL---GGSLSPL----------DRIGPEDIGIQS-- 129
+++VE A +E+ +V+ G L L + PE I ++
Sbjct: 17 LVIVESPAKAKTIEK---YLGKNYVVKASMGHLIDLPKSRIAIDVENNFEPEYITVRGRA 73
Query: 130 --LIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRL 173
L E + KK ++++ A EG+ A+++ + + D ++R+
Sbjct: 74 KILKELQKDAKKAKQVLLASDNDREGEAIAYHLANSIHNFCDTPVSRI 121
>gi|153003861|ref|YP_001378186.1| Holliday junction DNA helicase RuvA [Anaeromyxobacter sp. Fw109-5]
gi|166229629|sp|A7H906|RUVA_ANADF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|152027434|gb|ABS25202.1| Holliday junction DNA helicase RuvA [Anaeromyxobacter sp. Fw109-5]
Length = 197
Score = 38.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
+ + G ++ L ++PG G ++A R + L ++ L LA A K
Sbjct: 99 AQAVAGSDVARL----TKVPGIGKKTAERLVVEL----KEKLALLARAAGPARAKPG 147
>gi|148653226|ref|YP_001280319.1| Holliday junction DNA helicase RuvA [Psychrobacter sp. PRwf-1]
gi|172048524|sp|A5WFC8|RUVA_PSYWF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|148572310|gb|ABQ94369.1| Holliday junction DNA helicase subunit RuvA [Psychrobacter sp.
PRwf-1]
Length = 210
Score = 38.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRA 31
M + E+++ I L R+PG G ++A+R
Sbjct: 89 MMSTFSATELKHCIDTENDAALTRVPGIGKKTAQRL 124
>gi|254482531|ref|ZP_05095770.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium
HTCC2148]
gi|214037222|gb|EEB77890.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium
HTCC2148]
Length = 204
Score = 38.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
I L +PG G ++A R LV+ +++L L + +
Sbjct: 107 ISSLVALPGVGKKTAERL---LVEMRDKLKDWLGQLDGEL 143
>gi|296129641|ref|YP_003636891.1| Holliday junction DNA helicase RuvA [Cellulomonas flavigena DSM
20109]
gi|296021456|gb|ADG74692.1| Holliday junction DNA helicase RuvA [Cellulomonas flavigena DSM
20109]
Length = 202
Score = 38.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L R+PG G + A+R L L
Sbjct: 106 IAALMRVPGIGRKGAQRIVLEL 127
>gi|71065275|ref|YP_264002.1| Holliday junction DNA helicase RuvA [Psychrobacter arcticus 273-4]
gi|90135656|sp|Q4FTU0|RUVA_PSYA2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|71038260|gb|AAZ18568.1| Holliday junction DNA helicase subunit RuvA [Psychrobacter arcticus
273-4]
Length = 207
Score = 38.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMAN 52
M ++ E++ ++ L RIPG G ++A+R + L +K E L A+
Sbjct: 89 MLSAMSAAELKMHVEQESETALTRIPGIGKKTAQRLLIELKDKLKNIEVDNSNLEFAIQP 148
Query: 53 I 53
Sbjct: 149 A 149
>gi|149910565|ref|ZP_01899204.1| Holliday junction DNA helicase motor protein [Moritella sp. PE36]
gi|149806408|gb|EDM66381.1| Holliday junction DNA helicase motor protein [Moritella sp. PE36]
Length = 206
Score = 38.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
I L ++PG G ++A R LV+ ++
Sbjct: 107 INSLIKLPGVGKKTAERL---LVEMRD 130
>gi|93005514|ref|YP_579951.1| Holliday junction DNA helicase RuvA [Psychrobacter cryohalolentis
K5]
gi|123386742|sp|Q1QCY6|RUVA_PSYCK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|92393192|gb|ABE74467.1| Holliday junction DNA helicase subunit RuvA [Psychrobacter
cryohalolentis K5]
Length = 207
Score = 38.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKEQL 42
M ++ E++ ++ L RIPG G ++A+R L++ K++L
Sbjct: 89 MLSAMSAAELKMHVEQDSEDALTRIPGIGKKTAQRL---LIELKDKL 132
>gi|296270927|ref|YP_003653559.1| NAD(+) diphosphatase [Thermobispora bispora DSM 43833]
gi|296093714|gb|ADG89666.1| NAD(+) diphosphatase [Thermobispora bispora DSM 43833]
Length = 303
Score = 38.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 14/105 (13%)
Query: 24 GPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD------PCAICID 77
G + R L+ ++ L A A+ + C CG C D
Sbjct: 96 GEVTGLRRAAALLDDRDAGLFVYAVALEEWHATHEYCPRCGTRTDVTAAGHVRVCP--KD 153
Query: 78 -----QQRDASVIIVVEDVADLWALERSKAV-NALYHVLGGSLSP 116
+ D +VI++V D D L R + VL G + P
Sbjct: 154 GSQHFPRVDPAVIMLVHDDEDRALLARGPSWPEGRMSVLAGFVEP 198
>gi|289209177|ref|YP_003461243.1| Holliday junction DNA helicase RuvA [Thioalkalivibrio sp. K90mix]
gi|288944808|gb|ADC72507.1| Holliday junction DNA helicase RuvA [Thioalkalivibrio sp. K90mix]
Length = 201
Score = 38.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 12/53 (22%)
Query: 1 MQKKITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
M G E+ LI LA++PG G R+A R L +L LAE
Sbjct: 89 MLSTYAGDELAGLISGGDVTGLAKVPGIGKRTAERVVL-------ELGERLAE 134
>gi|118581082|ref|YP_902332.1| Holliday junction DNA helicase RuvA [Pelobacter propionicus DSM
2379]
gi|166230581|sp|A1ASF4|RUVA_PELPD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|118503792|gb|ABL00275.1| Holliday junction DNA helicase subunit RuvA [Pelobacter propionicus
DSM 2379]
Length = 198
Score = 38.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I++L+ +PG G ++A R L L
Sbjct: 106 IRMLSAVPGIGKKTAERLVLEL 127
>gi|297183449|gb|ADI19581.1| holliday junction resolvasome, DNA-binding subunit [uncultured
Acidobacteria bacterium HF0770_27F21]
Length = 192
Score = 38.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
I L+ IPG G ++A R L L ++ + L
Sbjct: 107 IVRLSTIPGVGKKTAERMALEL----KEKVDDLG 136
>gi|315126271|ref|YP_004068274.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas sp.
SM9913]
gi|315014785|gb|ADT68123.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas sp.
SM9913]
Length = 205
Score = 38.8 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G ++A R L +
Sbjct: 109 ALVKLPGVGKKTAERLVLEM 128
>gi|152990842|ref|YP_001356564.1| Holliday junction DNA helicase RuvA [Nitratiruptor sp. SB155-2]
gi|166230575|sp|A6Q3Z8|RUVA_NITSB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|151422703|dbj|BAF70207.1| holliday junction DNA helicase RuvA [Nitratiruptor sp. SB155-2]
Length = 184
Score = 38.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
+ +L ++PG GP+SA+R + L + + A
Sbjct: 105 VAMLKKVPGIGPKSAQRILVELGEFDISESNVTSSAFQEA 144
>gi|262282240|ref|ZP_06060008.1| DNA topoisomerase I [Streptococcus sp. 2_1_36FAA]
gi|262261531|gb|EEY80229.1| DNA topoisomerase I [Streptococcus sp. 2_1_36FAA]
Length = 697
Score = 38.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI R E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLRKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|157150871|ref|YP_001450484.1| DNA topoisomerase I [Streptococcus gordonii str. Challis substr.
CH1]
gi|157075665|gb|ABV10348.1| DNA topoisomerase I [Streptococcus gordonii str. Challis substr.
CH1]
Length = 697
Score = 38.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI R E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLRKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|326560238|gb|EGE10626.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 7169]
gi|326566444|gb|EGE16594.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis BC1]
Length = 204
Score = 38.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M ++ EI++ I+ L R+PG G ++A+R L L
Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128
>gi|313892539|ref|ZP_07826126.1| DNA topoisomerase I [Dialister microaerophilus UPII 345-E]
gi|313118936|gb|EFR42141.1| DNA topoisomerase I [Dialister microaerophilus UPII 345-E]
Length = 772
Score = 38.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 29/121 (23%)
Query: 78 QQRDASVIIVVEDVADLWALERSKAVNAL-YHVL--GGSLSPL----------DRIGPED 124
+ + ++VVE A +E+ Y VL G L L + PE
Sbjct: 27 PKANGKHLVVVESPAKAKTIEKIL---GKDYKVLASMGHLRDLPQRTLGVDIENGFTPEY 83
Query: 125 IG-------IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVK--ITRLAY 175
+ I+ L R E K +++ A EG+ + ++ + L +++K + R+A+
Sbjct: 84 VNSTERENVIKEL--RKEANKSKDVYLATDPDREGEAISWHLSNLL-DVNIKDNV-RIAF 139
Query: 176 G 176
Sbjct: 140 H 140
>gi|184201011|ref|YP_001855218.1| Holliday junction DNA helicase RuvA [Kocuria rhizophila DC2201]
gi|229560091|sp|B2GIL9|RUVA_KOCRD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|183581241|dbj|BAG29712.1| Holliday junction DNA helicase RuvA [Kocuria rhizophila DC2201]
Length = 213
Score = 38.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 15 KILARIPGFGPRSARRATLHLVKK 38
K +PG GP+SARR L L K
Sbjct: 108 KAFTAVPGIGPKSARRIVLELADK 131
>gi|326575817|gb|EGE25740.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis CO72]
Length = 204
Score = 38.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M ++ EI++ I+ L R+PG G ++A+R L L
Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128
>gi|332664106|ref|YP_004446894.1| UvrABC system protein C [Haliscomenobacter hydrossis DSM 1100]
gi|332332920|gb|AEE50021.1| UvrABC system protein C [Haliscomenobacter hydrossis DSM 1100]
Length = 602
Score = 38.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 16 ILARIPGFGPRSARRATLH---LVKKKEQLLGPLAEAMANIYNKV 57
L IPG G ++A++ H + K +E L L E + KV
Sbjct: 548 ELNNIPGIGEKTAQKLLTHFGSVRKIREALASELIEVLGMAKAKV 592
>gi|327394173|dbj|BAK11595.1| Holliday junction DNA helicase RuvA [Pantoea ananatis AJ13355]
Length = 175
Score = 38.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 78 IAALVKLPGVGKKTAERLV 96
>gi|326562883|gb|EGE13170.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 46P47B1]
gi|326563676|gb|EGE13928.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis
103P14B1]
gi|326565244|gb|EGE15429.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 12P80B1]
gi|326570251|gb|EGE20296.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis BC8]
gi|326570988|gb|EGE21012.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis BC7]
gi|326573284|gb|EGE23252.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis
101P30B1]
gi|326576898|gb|EGE26804.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis O35E]
Length = 204
Score = 38.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M ++ EI++ I+ L R+PG G ++A+R L L
Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128
>gi|317124983|ref|YP_004099095.1| Holliday junction DNA helicase subunit RuvA [Intrasporangium calvum
DSM 43043]
gi|315589071|gb|ADU48368.1| Holliday junction DNA helicase subunit RuvA [Intrasporangium calvum
DSM 43043]
Length = 201
Score = 38.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
I L ++PG G + A R L L LG LA
Sbjct: 106 IAALTKVPGIGKKGAERLVLEL----RDKLGALA 135
>gi|238898994|ref|YP_002924676.1| Holliday junction helicase, subunit A [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|259495647|sp|C4K7I5|RUVA_HAMD5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229466754|gb|ACQ68528.1| Holliday junction helicase, subunit A [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 204
Score = 38.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKE 40
++I NLI ++PG G ++A R LV+ K+
Sbjct: 105 EDISNLI----KLPGVGKKTAERL---LVEMKD 130
>gi|145297804|ref|YP_001140645.1| Holliday junction DNA helicase RuvA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166229628|sp|A4SJ25|RUVA_AERS4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|142850576|gb|ABO88897.1| holliday junction DNA helicase RuvA [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 204
Score = 38.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISSLIKLPGVGKKTAERLV 125
>gi|167629898|ref|YP_001680397.1| holliday junction DNA helicase ruva [Heliobacterium modesticaldum
Ice1]
gi|167592638|gb|ABZ84386.1| holliday junction DNA helicase ruva [Heliobacterium modesticaldum
Ice1]
Length = 274
Score = 38.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 10 IENLIKILARIPGFGPRSARRATLHL 35
I + L RIPG G ++A+R + L
Sbjct: 103 IAEDVLALTRIPGIGRKTAQRLVIEL 128
>gi|117618993|ref|YP_858104.1| Holliday junction DNA helicase RuvA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166229627|sp|A0KPA3|RUVA_AERHH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|117560400|gb|ABK37348.1| Holliday junction DNA helicase RuvA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 204
Score = 38.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISSLVKLPGVGKKTAERLV 125
>gi|330828297|ref|YP_004391249.1| Holliday junction ATP-dependent DNA helicase ruvA [Aeromonas
veronii B565]
gi|328803433|gb|AEB48632.1| Holliday junction ATP-dependent DNA helicase ruvA [Aeromonas
veronii B565]
Length = 229
Score = 38.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 132 ISSLVKLPGVGKKTAERLV 150
>gi|157364836|ref|YP_001471603.1| RuvA domain-containing protein [Thermotoga lettingae TMO]
gi|157315440|gb|ABV34539.1| RuvA domain protein [Thermotoga lettingae TMO]
Length = 186
Score = 38.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 14 IKILARIPGFGPRSARRATLHL----VKKKEQLLGPLAEAMANIYN 55
++ L+R PG G ++A R L + K L++A+ +
Sbjct: 104 VEKLSRFPGIGKKTAERLIAELKDEEFEIKSDYSKELSDAIDALVA 149
>gi|39996178|ref|NP_952129.1| Holliday junction DNA helicase RuvA [Geobacter sulfurreducens PCA]
gi|81702836|sp|Q74E87|RUVA_GEOSL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|39982943|gb|AAR34402.1| Holliday junction DNA helicase RuvA [Geobacter sulfurreducens PCA]
gi|298505192|gb|ADI83915.1| Holliday junction DNA helicase RuvA [Geobacter sulfurreducens
KN400]
Length = 199
Score = 38.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
I +E+ I L+ IPG G ++A R L L
Sbjct: 91 SNIQPEELAAAIVQGNLVRLSSIPGIGKKTAERLVLEL 128
>gi|6685946|sp|Q9WY12|RUVA_THEMA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
Length = 188
Score = 38.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128
>gi|218288865|ref|ZP_03493116.1| Holliday junction DNA helicase RuvA [Alicyclobacillus
acidocaldarius LAA1]
gi|218240954|gb|EED08131.1| Holliday junction DNA helicase RuvA [Alicyclobacillus
acidocaldarius LAA1]
Length = 208
Score = 38.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
++ L+R+PG G + A R + L + L LA
Sbjct: 106 VESLSRLPGIGRKLASRLVVEL----REKLDDLA 135
>gi|109899252|ref|YP_662507.1| Holliday junction DNA helicase RuvA [Pseudoalteromonas atlantica
T6c]
gi|109701533|gb|ABG41453.1| Holliday junction DNA helicase subunit RuvA [Pseudoalteromonas
atlantica T6c]
Length = 209
Score = 38.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 109 ITALVKLPGVGKKTAERLV 127
>gi|332305758|ref|YP_004433609.1| Holliday junction DNA helicase RuvA [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173087|gb|AEE22341.1| Holliday junction DNA helicase RuvA [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 207
Score = 38.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITALVKLPGVGKKTAERLV 125
>gi|296113247|ref|YP_003627185.1| holliday junction DNA helicase RuvA [Moraxella catarrhalis RH4]
gi|295920941|gb|ADG61292.1| holliday junction DNA helicase RuvA [Moraxella catarrhalis RH4]
Length = 204
Score = 38.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M ++ EI++ I+ L R+PG G ++A+R L L
Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128
>gi|50121417|ref|YP_050584.1| Holliday junction DNA helicase RuvA [Pectobacterium atrosepticum
SCRI1043]
gi|81644878|sp|Q6D4A1|RUVA_ERWCT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|49611943|emb|CAG75392.1| holliday junction DNA helicase [Pectobacterium atrosepticum
SCRI1043]
Length = 205
Score = 38.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IGALIKLPGVGKKTAERLV 125
>gi|261821379|ref|YP_003259485.1| Holliday junction DNA helicase RuvA [Pectobacterium wasabiae
WPP163]
gi|261605392|gb|ACX87878.1| Holliday junction DNA helicase RuvA [Pectobacterium wasabiae
WPP163]
Length = 205
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IGALIKLPGVGKKTAERLV 125
>gi|242239574|ref|YP_002987755.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech703]
gi|242131631|gb|ACS85933.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech703]
Length = 204
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IGALVKLPGVGKKTAERLV 125
>gi|227329529|ref|ZP_03833553.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 205
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IGALIKLPGVGKKTAERLV 125
>gi|59802051|ref|YP_208763.1| Holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
FA 1090]
gi|194099623|ref|YP_002002754.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae
NCCP11945]
gi|239999822|ref|ZP_04719746.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae 35/02]
gi|240014978|ref|ZP_04721891.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae DGI18]
gi|240116581|ref|ZP_04730643.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID18]
gi|240118805|ref|ZP_04732867.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID1]
gi|240122047|ref|ZP_04735009.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID24-1]
gi|240124344|ref|ZP_04737300.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID332]
gi|254494604|ref|ZP_05107775.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
1291]
gi|260439658|ref|ZP_05793474.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae DGI2]
gi|268595632|ref|ZP_06129799.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
35/02]
gi|268602250|ref|ZP_06136417.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
PID18]
gi|268604516|ref|ZP_06138683.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
PID1]
gi|268682971|ref|ZP_06149833.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
PID332]
gi|291042899|ref|ZP_06568640.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
DGI2]
gi|293398091|ref|ZP_06642296.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae F62]
gi|75355491|sp|Q5F636|RUVA_NEIG1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560109|sp|B4RPG0|RUVA_NEIG2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|59718946|gb|AAW90351.1| putative Holliday junction DNA helicase [Neisseria gonorrhoeae FA
1090]
gi|193934913|gb|ACF30737.1| Holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
NCCP11945]
gi|226513644|gb|EEH62989.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
1291]
gi|268549021|gb|EEZ44439.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
35/02]
gi|268586381|gb|EEZ51057.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
PID18]
gi|268588647|gb|EEZ53323.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
PID1]
gi|268623255|gb|EEZ55655.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
PID332]
gi|291013333|gb|EFE05299.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
DGI2]
gi|291611354|gb|EFF40424.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae F62]
gi|317165112|gb|ADV08653.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 194
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|325203380|gb|ADY98833.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
M01-240355]
Length = 194
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|297170981|gb|ADI21996.1| holliday junction resolvasome, DNA-binding subunit [uncultured
myxobacterium HF0200_01L06]
Length = 202
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
+K+L +PG GP+ A R + L LA A+ +
Sbjct: 107 VKVLRGVPGIGPKMAERMVVEL----RDAASELAGALGSA 142
>gi|313669264|ref|YP_004049548.1| Holliday junction DNA helicase [Neisseria lactamica ST-640]
gi|313006726|emb|CBN88196.1| Holliday junction DNA helicase [Neisseria lactamica 020-06]
Length = 194
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|281412224|ref|YP_003346303.1| Holliday junction DNA helicase RuvA [Thermotoga naphthophila
RKU-10]
gi|281373327|gb|ADA66889.1| Holliday junction DNA helicase RuvA [Thermotoga naphthophila
RKU-10]
Length = 188
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128
>gi|240017426|ref|ZP_04723966.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae FA6140]
gi|240081568|ref|ZP_04726111.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae FA19]
gi|240113847|ref|ZP_04728337.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae MS11]
gi|240126556|ref|ZP_04739442.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae
SK-92-679]
gi|240129018|ref|ZP_04741679.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae
SK-93-1035]
gi|268597664|ref|ZP_06131831.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
FA19]
gi|268599915|ref|ZP_06134082.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
MS11]
gi|268685136|ref|ZP_06151998.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
SK-92-679]
gi|268687398|ref|ZP_06154260.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
SK-93-1035]
gi|268551452|gb|EEZ46471.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
FA19]
gi|268584046|gb|EEZ48722.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
MS11]
gi|268625420|gb|EEZ57820.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
SK-92-679]
gi|268627682|gb|EEZ60082.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae
SK-93-1035]
Length = 194
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|15642939|ref|NP_227980.1| Holliday junction DNA helicase RuvA [Thermotoga maritima MSB8]
gi|4980659|gb|AAD35258.1|AE001701_11 Holliday junction DNA helicase [Thermotoga maritima MSB8]
Length = 191
Score = 38.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131
>gi|291617754|ref|YP_003520496.1| RuvA [Pantoea ananatis LMG 20103]
gi|291152784|gb|ADD77368.1| RuvA [Pantoea ananatis LMG 20103]
Length = 204
Score = 38.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IAALVKLPGVGKKTAERLV 125
>gi|219669644|ref|YP_002460079.1| Holliday junction DNA helicase RuvA [Desulfitobacterium hafniense
DCB-2]
gi|219539904|gb|ACL21643.1| Holliday junction DNA helicase RuvA [Desulfitobacterium hafniense
DCB-2]
Length = 198
Score = 38.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I +L ++PG G ++A+R L L
Sbjct: 103 ITLLTKVPGIGKKTAQRLILEL 124
>gi|145640257|ref|ZP_01795841.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae R3021]
gi|145274843|gb|EDK14705.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 22.4-21]
Length = 181
Score = 38.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAHAIER--EELSKLTKIPGVGKKTAERL 124
>gi|61657364|emb|CAI44281.1| holliday junction DNA helicase [Thermotoga naphthophila RKU-10]
Length = 191
Score = 38.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131
>gi|89895213|ref|YP_518700.1| hypothetical protein DSY2467 [Desulfitobacterium hafniense Y51]
gi|122997255|sp|Q24UN6|RUVA_DESHY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|89334661|dbj|BAE84256.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 201
Score = 38.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I +L ++PG G ++A+R L L
Sbjct: 106 ITLLTKVPGIGKKTAQRLILEL 127
>gi|190576013|ref|YP_001973858.1| DNA topoisomerase I [Stenotrophomonas maltophilia K279a]
gi|190013935|emb|CAQ47575.1| putative DNA topoisomerase I [Stenotrophomonas maltophilia K279a]
Length = 830
Score = 38.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 21/102 (20%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVL------------GGSLSPLDRIGPEDIGIQSLI 131
+++VE A + Y VL G++ P + I
Sbjct: 5 LLIVESPAKAKTI---NKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKNE 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGIDV 168
+ ++ K +++ A EG+ + +I + LK +
Sbjct: 62 KHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGL 103
>gi|170288580|ref|YP_001738818.1| Holliday junction DNA helicase RuvA [Thermotoga sp. RQ2]
gi|170176083|gb|ACB09135.1| Holliday junction DNA helicase RuvA [Thermotoga sp. RQ2]
Length = 188
Score = 38.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128
>gi|148269895|ref|YP_001244355.1| Holliday junction DNA helicase RuvA [Thermotoga petrophila RKU-1]
gi|166231455|sp|A5IKQ6|RUVA_THEP1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|147735439|gb|ABQ46779.1| Holliday junction DNA helicase subunit RuvA [Thermotoga petrophila
RKU-1]
Length = 188
Score = 38.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128
>gi|255066950|ref|ZP_05318805.1| holliday junction DNA helicase RuvA [Neisseria sicca ATCC 29256]
gi|255048775|gb|EET44239.1| holliday junction DNA helicase RuvA [Neisseria sicca ATCC 29256]
Length = 194
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35
++ E+ + + + R+ PG G ++A R L L
Sbjct: 91 SAMSADELARAVADEDIKRLSSAPGIGKKTAERMVLEL 128
>gi|253688206|ref|YP_003017396.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259495651|sp|C6DFF1|RUVA_PECCP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|251754784|gb|ACT12860.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 205
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IGALIKLPGVGKKTAERLV 125
>gi|326795234|ref|YP_004313054.1| Holliday junction ATP-dependent DNA helicase ruvA [Marinomonas
mediterranea MMB-1]
gi|326545998|gb|ADZ91218.1| Holliday junction ATP-dependent DNA helicase ruvA [Marinomonas
mediterranea MMB-1]
Length = 199
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 6 TGKEIENL----IKILARIPGFGPRSARRA 31
T + IEN+ + L +IPG G ++A R
Sbjct: 95 TSELIENVQESNVDALVKIPGVGKKTAERL 124
>gi|254496522|ref|ZP_05109393.1| holliday junction DNA helicase [Legionella drancourtii LLAP12]
gi|254354261|gb|EET12925.1| holliday junction DNA helicase [Legionella drancourtii LLAP12]
Length = 199
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 9/51 (17%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
IT E IK L ++PG G ++A R + + + +E
Sbjct: 92 SSITPNEFIQCIKQEKAAFLTKLPGIGKKTAERLVIEM----RDSIKQFSE 138
>gi|254410540|ref|ZP_05024319.1| Holliday junction DNA helicase RuvA [Microcoleus chthonoplastes PCC
7420]
gi|196182746|gb|EDX77731.1| Holliday junction DNA helicase RuvA [Microcoleus chthonoplastes PCC
7420]
Length = 210
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
++NL++ LA+ PG G ++A R L L
Sbjct: 101 LQNLVQAIVTGNTRTLAKTPGVGSKTAERIALEL 134
>gi|158320755|ref|YP_001513262.1| Holliday junction DNA helicase RuvA [Alkaliphilus oremlandii
OhILAs]
gi|167012655|sp|A8MHI4|RUVA_ALKOO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|158140954|gb|ABW19266.1| Holliday junction DNA helicase RuvA [Alkaliphilus oremlandii
OhILAs]
Length = 194
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHL 35
K++ + I L++ PG G ++A R L L
Sbjct: 94 PNKLSAYILSKDISALSKAPGVGKKTAERIILEL 127
>gi|77360814|ref|YP_340389.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas
haloplanktis TAC125]
gi|90135604|sp|Q3IIJ1|RUVA_PSEHT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|76875725|emb|CAI86946.1| Holliday junction helicase, subunit A [Pseudoalteromonas
haloplanktis TAC125]
Length = 205
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G ++A R L +
Sbjct: 109 SLVKLPGVGKKTAERLVLEM 128
>gi|15676189|ref|NP_273321.1| Holliday junction DNA helicase motor protein [Neisseria
meningitidis MC58]
gi|20455266|sp|Q9K1A2|RUVA_NEIMB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|7225489|gb|AAF40719.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis MC58]
gi|261391796|emb|CAX49251.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis 8013]
gi|316985194|gb|EFV64146.1| holliday junction DNA helicase RuvA [Neisseria meningitidis H44/76]
gi|325137090|gb|EGC59686.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M0579]
gi|325139154|gb|EGC61700.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
ES14902]
gi|325141101|gb|EGC63604.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis CU385]
gi|325199468|gb|ADY94923.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis H44/76]
gi|325202908|gb|ADY98362.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
M01-240149]
gi|325207293|gb|ADZ02745.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
NZ-05/33]
Length = 194
Score = 38.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|325135068|gb|EGC57696.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M13399]
Length = 194
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|309379780|emb|CBX21556.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 194
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|261365694|ref|ZP_05978577.1| holliday junction DNA helicase RuvA [Neisseria mucosa ATCC 25996]
gi|288565789|gb|EFC87349.1| holliday junction DNA helicase RuvA [Neisseria mucosa ATCC 25996]
Length = 194
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35
++ E+ + + + R+ PG G ++A R L L
Sbjct: 91 SAMSADELARAVADEDIKRLSSAPGIGKKTAERMVLEL 128
>gi|116620084|ref|YP_822240.1| Holliday junction DNA helicase RuvA [Candidatus Solibacter usitatus
Ellin6076]
gi|122255537|sp|Q02AG7|RUVA_SOLUE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|116223246|gb|ABJ81955.1| Holliday junction DNA helicase RuvA [Candidatus Solibacter usitatus
Ellin6076]
Length = 197
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 14 IKILARIPGFGPRSARRATLHLVKK-----KEQLLGPLAEAMANIYNKV 57
++ L ++PG G ++A R L L K E+ P AEA++ I V
Sbjct: 107 VEKLVKVPGVGKKTAERMVLELRDKLPAATGEEPGAPAAEALSPIDQDV 155
>gi|61657382|emb|CAI44298.1| holliday junction DNA helicase [Thermotoga petrophila]
Length = 191
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131
>gi|61657514|emb|CAI44425.1| holliday junction DNA helicase [Thermotoga sp. RQ2]
Length = 191
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L+++PG ++A R + L
Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131
>gi|256847173|ref|ZP_05552619.1| DNA topoisomerase I [Lactobacillus coleohominis 101-4-CHN]
gi|256715837|gb|EEU30812.1| DNA topoisomerase I [Lactobacillus coleohominis 101-4-CHN]
Length = 709
Score = 38.4 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 21/104 (20%)
Query: 79 QRDASVIIVVEDVADLWALERSKAVNAL-YHVLGGSLSPLD------------RIGPEDI 125
R+ +++VE + + Y V+ D P+ I
Sbjct: 21 NRNKKKLVIVESPSKAKTI---GKYLGRTYKVVASLGHVRDLPKSRMGVEIDNNYQPDYI 77
Query: 126 GIQSL-----IERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164
I+ R + + + + A EG+ A ++ + LK
Sbjct: 78 SIRGKGDVIKELRRDARNAKAVYLASDPDREGEAIAWHVSNLLK 121
>gi|254523676|ref|ZP_05135731.1| DNA topoisomerase I [Stenotrophomonas sp. SKA14]
gi|219721267|gb|EED39792.1| DNA topoisomerase I [Stenotrophomonas sp. SKA14]
Length = 825
Score = 38.4 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 21/102 (20%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVL------------GGSLSPLDRIGPEDIGIQSLI 131
+++VE A + Y VL G++ P + I
Sbjct: 5 LLIVESPAKAKTI---NKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKNE 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGIDV 168
+ ++ K +++ A EG+ + +I + LK +
Sbjct: 62 KHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGL 103
>gi|327303066|ref|XP_003236225.1| calcium-transporting ATPase 1 [Trichophyton rubrum CBS 118892]
gi|326461567|gb|EGD87020.1| calcium-transporting ATPase 1 (Golgi Ca(2+)-ATPase) [Trichophyton
rubrum CBS 118892]
Length = 1057
Score = 38.4 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 103 VNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162
L + G + D P + I R+ ++ ++ T + +TTA I K
Sbjct: 646 YTGL--IFSGLVGMND---PPRKDVHKSIRRLMAGGVKVIMI----TGDAETTAVAIAKK 696
Query: 163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
L G+ + + A + G E+D+++ + +AI
Sbjct: 697 L-GMPINSSSAARPVLRGDEIDHMNTEELAQAISG 730
>gi|302665525|ref|XP_003024372.1| hypothetical protein TRV_01438 [Trichophyton verrucosum HKI 0517]
gi|291188424|gb|EFE43761.1| hypothetical protein TRV_01438 [Trichophyton verrucosum HKI 0517]
Length = 1057
Score = 38.4 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 103 VNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162
L + G + D P + I R+ ++ ++ T + +TTA I K
Sbjct: 646 YTGL--IFSGLVGMND---PPRKDVHKSIRRLMAGGVKVIMI----TGDAETTAVAIAKK 696
Query: 163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
L G+ + + A + G E+D+++ + +AI
Sbjct: 697 L-GMPINSSSAARPVLRGDEIDHMNTEELAQAISG 730
>gi|302141786|emb|CBI18989.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 38.4 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 10/64 (15%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQ----------LLGPLAEAMANIYNKVC 58
+++ ++ L+ +PG GP+ A L + + L +A
Sbjct: 74 DLQEVVDALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELAGARLTPK 133
Query: 59 LCSI 62
LCS
Sbjct: 134 LCSR 137
>gi|225459615|ref|XP_002285873.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 399
Score = 38.4 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 10/64 (15%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQ----------LLGPLAEAMANIYNKVC 58
+++ ++ L+ +PG GP+ A L + + L +A
Sbjct: 269 DLQEVVDALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELAGARLTPK 328
Query: 59 LCSI 62
LCS
Sbjct: 329 LCSR 332
>gi|292488538|ref|YP_003531422.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia
amylovora CFBP1430]
gi|292899714|ref|YP_003539083.1| holliday junction DNA helicase [Erwinia amylovora ATCC 49946]
gi|291199562|emb|CBJ46679.1| holliday junction DNA helicase [Erwinia amylovora ATCC 49946]
gi|291553969|emb|CBA21014.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia
amylovora CFBP1430]
gi|312172681|emb|CBX80937.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia
amylovora ATCC BAA-2158]
Length = 204
Score = 38.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IAALVKLPGVGKKTAERLV 125
>gi|259908219|ref|YP_002648575.1| Holliday junction DNA helicase RuvA [Erwinia pyrifoliae Ep1/96]
gi|224963841|emb|CAX55343.1| Holliday junction ATP-dependent DNA helicase [Erwinia pyrifoliae
Ep1/96]
gi|283478149|emb|CAY74065.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia
pyrifoliae DSM 12163]
gi|310767866|gb|ADP12816.1| Holliday junction DNA helicase RuvA [Erwinia sp. Ejp617]
Length = 204
Score = 38.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IAALVKLPGVGKKTAERLV 125
>gi|227111608|ref|ZP_03825264.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 205
Score = 38.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IGALIKLPGVGKKTAERLV 125
>gi|226942024|ref|YP_002797098.1| RuvA [Laribacter hongkongensis HLHK9]
gi|254766965|sp|C1D5S2|RUVA_LARHH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226716951|gb|ACO76089.1| RuvA [Laribacter hongkongensis HLHK9]
Length = 202
Score = 38.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK L+R+PG G ++A R L L
Sbjct: 107 IKTLSRVPGIGKKTAERLILEL 128
>gi|260772519|ref|ZP_05881435.1| holliday junction DNA helicase RuvA [Vibrio metschnikovii CIP
69.14]
gi|260611658|gb|EEX36861.1| holliday junction DNA helicase RuvA [Vibrio metschnikovii CIP
69.14]
Length = 205
Score = 38.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
I L ++PG G ++A R LV+ K+
Sbjct: 107 ISTLIKLPGVGKKTAERL---LVEMKD 130
>gi|188533631|ref|YP_001907428.1| Holliday junction DNA helicase RuvA [Erwinia tasmaniensis Et1/99]
gi|229560030|sp|B2VJ94|RUVA_ERWT9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|188028673|emb|CAO96535.1| Holliday junction ATP-dependent DNA helicase [Erwinia tasmaniensis
Et1/99]
Length = 204
Score = 38.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IAALVKLPGVGKKTAERLV 125
>gi|261400495|ref|ZP_05986620.1| holliday junction DNA helicase RuvA [Neisseria lactamica ATCC
23970]
gi|269209755|gb|EEZ76210.1| holliday junction DNA helicase RuvA [Neisseria lactamica ATCC
23970]
Length = 194
Score = 38.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|119472454|ref|ZP_01614553.1| Holliday junction DNA helicase motor protein [Alteromonadales
bacterium TW-7]
gi|119444891|gb|EAW26190.1| Holliday junction DNA helicase motor protein [Alteromonadales
bacterium TW-7]
Length = 205
Score = 38.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G ++A R L +
Sbjct: 109 SLVKLPGVGKKTAERLVLEM 128
>gi|223933446|ref|ZP_03625431.1| ATP-dependent DNA helicase RecG [Streptococcus suis 89/1591]
gi|330832178|ref|YP_004401003.1| ATP-dependent DNA helicase [Streptococcus suis ST3]
gi|223897884|gb|EEF64260.1| ATP-dependent DNA helicase RecG [Streptococcus suis 89/1591]
gi|329306401|gb|AEB80817.1| ATP-dependent DNA helicase [Streptococcus suis ST3]
Length = 672
Score = 38.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 12 NLIKILARIPGFGPRSARRA 31
L L+ +PG GP+SA +
Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22
>gi|253751213|ref|YP_003024354.1| ATP-dependent DNA helicase [Streptococcus suis SC84]
gi|253753114|ref|YP_003026254.1| ATP-dependent DNA helicase [Streptococcus suis P1/7]
gi|253754936|ref|YP_003028076.1| ATP-dependent DNA helicase [Streptococcus suis BM407]
gi|251815502|emb|CAZ51080.1| ATP-dependent DNA helicase [Streptococcus suis SC84]
gi|251817400|emb|CAZ55136.1| ATP-dependent DNA helicase [Streptococcus suis BM407]
gi|251819359|emb|CAR44751.1| ATP-dependent DNA helicase [Streptococcus suis P1/7]
gi|292557775|gb|ADE30776.1| ATP-dependent DNA helicase RecG [Streptococcus suis GZ1]
gi|319757485|gb|ADV69427.1| ATP-dependent DNA helicase [Streptococcus suis JS14]
Length = 672
Score = 38.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 12 NLIKILARIPGFGPRSARRA 31
L L+ +PG GP+SA +
Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22
>gi|269126344|ref|YP_003299714.1| Holliday junction DNA helicase RuvA [Thermomonospora curvata DSM
43183]
gi|268311302|gb|ACY97676.1| Holliday junction DNA helicase RuvA [Thermomonospora curvata DSM
43183]
Length = 202
Score = 38.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L ++PG G + A+R L L
Sbjct: 106 VAALTKVPGIGKKGAQRIVLEL 127
>gi|146320180|ref|YP_001199891.1| RecG-like helicase [Streptococcus suis 98HAH33]
gi|145690986|gb|ABP91491.1| RecG-like helicase [Streptococcus suis 98HAH33]
Length = 635
Score = 38.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 12 NLIKILARIPGFGPRSARRA 31
L L+ +PG GP+SA +
Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22
>gi|254805692|ref|YP_003083913.1| holliday junction DNA helicase [Neisseria meningitidis alpha14]
gi|254669234|emb|CBA08082.1| holliday junction DNA helicase [Neisseria meningitidis alpha14]
Length = 194
Score = 38.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|262197811|ref|YP_003269020.1| DNA topoisomerase I [Haliangium ochraceum DSM 14365]
gi|262081158|gb|ACY17127.1| DNA topoisomerase I [Haliangium ochraceum DSM 14365]
Length = 894
Score = 38.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
R +++ E+ A EG+ A +I +++K I+ I R+
Sbjct: 202 RKAAERVEEVYLAPDPDREGEAIAWHIAEEIKPINDNIKRI 242
>gi|241741008|ref|XP_002412368.1| conserved hypothetical protein [Ixodes scapularis]
gi|215505685|gb|EEC15179.1| conserved hypothetical protein [Ixodes scapularis]
Length = 719
Score = 38.0 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Query: 32 TLHLVKKKEQLLGP-LAEAMANIYNKVCLCSICGNVDTTDPCAICIDQ 78
L++ L L +A+ V C +C C IC D
Sbjct: 611 AFDLLQVPSGALQRTLEKAIKFARAHVLACQLCAA--KGFVCEICQDP 656
>gi|219849021|ref|YP_002463454.1| Holliday junction DNA helicase RuvA [Chloroflexus aggregans DSM
9485]
gi|254766951|sp|B8GCH4|RUVA_CHLAD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|219543280|gb|ACL25018.1| Holliday junction DNA helicase RuvA [Chloroflexus aggregans DSM
9485]
Length = 195
Score = 38.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
+ LAR+PG G ++A R L L + + LA +
Sbjct: 107 VARLARVPGIGKKTAERIVLEL--RGKIDFRQLAAS 140
>gi|300717084|ref|YP_003741887.1| Holliday junction ATP-dependent DNA helicase [Erwinia billingiae
Eb661]
gi|299062920|emb|CAX60040.1| Holliday junction ATP-dependent DNA helicase [Erwinia billingiae
Eb661]
Length = 205
Score = 38.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IAALVKLPGVGKKTAERLV 125
>gi|296313720|ref|ZP_06863661.1| holliday junction DNA helicase RuvA [Neisseria polysaccharea ATCC
43768]
gi|296839643|gb|EFH23581.1| holliday junction DNA helicase RuvA [Neisseria polysaccharea ATCC
43768]
Length = 194
Score = 38.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|261378519|ref|ZP_05983092.1| holliday junction DNA helicase RuvA [Neisseria cinerea ATCC 14685]
gi|269145069|gb|EEZ71487.1| holliday junction DNA helicase RuvA [Neisseria cinerea ATCC 14685]
Length = 194
Score = 38.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|90417110|ref|ZP_01225038.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium
HTCC2207]
gi|90331126|gb|EAS46382.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium
HTCC2207]
Length = 199
Score = 38.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQ 41
I L ++PG G ++A R L++ +++
Sbjct: 107 IATLVKLPGVGKKTAERL---LIEMRDK 131
>gi|322832435|ref|YP_004212462.1| Holliday junction DNA helicase RuvA [Rahnella sp. Y9602]
gi|321167636|gb|ADW73335.1| Holliday junction DNA helicase RuvA [Rahnella sp. Y9602]
Length = 204
Score = 38.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITALIKLPGVGKKTAERLV 125
>gi|146317997|ref|YP_001197709.1| RecG-like helicase [Streptococcus suis 05ZYH33]
gi|145688803|gb|ABP89309.1| RecG-like helicase [Streptococcus suis 05ZYH33]
Length = 542
Score = 38.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 12 NLIKILARIPGFGPRSARRA 31
L L+ +PG GP+SA +
Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22
>gi|329121224|ref|ZP_08249851.1| DNA topoisomerase TopA [Dialister micraerophilus DSM 19965]
gi|327470158|gb|EGF15621.1| DNA topoisomerase TopA [Dialister micraerophilus DSM 19965]
Length = 470
Score = 38.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 29/121 (23%)
Query: 78 QQRDASVIIVVEDVADLWALERSKAVNAL-YHVL--GGSLSPL----------DRIGPED 124
+ + ++VVE A +E+ Y VL G L L + PE
Sbjct: 38 PKANGKHLVVVESPAKAKTIEKIL---GKDYKVLASMGHLRDLPQRTLGVDIENGFTPEY 94
Query: 125 IG-------IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVK--ITRLAY 175
+ I+ L R E + +++ A EG+ + ++ + L +++K + R+A+
Sbjct: 95 VNSTERENVIKEL--RKEANRSKDVYLATDPDREGEAISWHLSNLL-DVNIKDNV-RIAF 150
Query: 176 G 176
Sbjct: 151 H 151
>gi|308187172|ref|YP_003931303.1| Holliday junction ATP-dependent DNA helicase ruvA [Pantoea vagans
C9-1]
gi|308057682|gb|ADO09854.1| Holliday junction ATP-dependent DNA helicase ruvA [Pantoea vagans
C9-1]
Length = 167
Score = 38.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 70 IASLVKLPGVGKKTAERLV 88
>gi|78221965|ref|YP_383712.1| Holliday junction DNA helicase RuvA [Geobacter metallireducens
GS-15]
gi|123729330|sp|Q39XN7|RUVA_GEOMG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|78193220|gb|ABB30987.1| Holliday junction DNA helicase subunit RuvA [Geobacter
metallireducens GS-15]
Length = 199
Score = 38.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 12 NLIKILARIPGFGPRSARRATLHL 35
NL++ L+ IPG G ++A R L L
Sbjct: 106 NLVR-LSSIPGIGKKTAERLVLEL 128
>gi|285019190|ref|YP_003376901.1| holliday junction resolvasome, DNA-binding subunit protein
[Xanthomonas albilineans GPE PC73]
gi|283474408|emb|CBA16909.1| putative holliday junction resolvasome, dna-binding subunit protein
[Xanthomonas albilineans]
Length = 194
Score = 38.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L RIPG G ++A R + L
Sbjct: 107 VTALTRIPGIGKKTAERMVVEL 128
>gi|241760730|ref|ZP_04758822.1| holliday junction DNA helicase RuvA [Neisseria flavescens SK114]
gi|241318911|gb|EER55437.1| holliday junction DNA helicase RuvA [Neisseria flavescens SK114]
Length = 194
Score = 38.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ E+ I L+ PG G ++A R L L
Sbjct: 91 SAMNADELAQAIAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|114321641|ref|YP_743324.1| Holliday junction DNA helicase RuvA [Alkalilimnicola ehrlichii
MLHE-1]
gi|122310889|sp|Q0A5Q3|RUVA_ALHEH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|114228035|gb|ABI57834.1| Holliday junction DNA helicase subunit RuvA [Alkalilimnicola
ehrlichii MLHE-1]
Length = 208
Score = 38.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRA 31
+ + ++ I+ L R+PG G ++A+R
Sbjct: 93 MNAEGLQRCIEREDVATLTRLPGVGRKTAQRL 124
>gi|261340247|ref|ZP_05968105.1| holliday junction DNA helicase RuvA [Enterobacter cancerogenus ATCC
35316]
gi|288317332|gb|EFC56270.1| holliday junction DNA helicase RuvA [Enterobacter cancerogenus ATCC
35316]
Length = 203
Score = 38.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ + N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAPQFVNAVEREDPAALIKLPGIGKKTAERL---IVEMKD 130
>gi|154707705|ref|YP_001423840.1| Holliday junction DNA helicase RuvA [Coxiella burnetii Dugway
5J108-111]
gi|189045750|sp|A9KF41|RUVA_COXBN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|154356991|gb|ABS78453.1| holliday junction DNA helicase [Coxiella burnetii Dugway 5J108-111]
Length = 200
Score = 38.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L RIPG G ++A R
Sbjct: 107 IDQLVRIPGVGRKTAERLV 125
>gi|329296286|ref|ZP_08253622.1| Holliday junction DNA helicase RuvA [Plautia stali symbiont]
Length = 204
Score = 38.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IASLVKLPGVGKKTAERLV 125
>gi|317402225|gb|EFV82814.1| Holliday junction DNA helicase [Achromobacter xylosoxidans C54]
Length = 190
Score = 38.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
L R+PG G ++A R L++ + +L + +++
Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGATAHAVHDN 146
>gi|284048863|ref|YP_003399202.1| Holliday junction DNA helicase RuvA [Acidaminococcus fermentans DSM
20731]
gi|283953084|gb|ADB47887.1| Holliday junction DNA helicase RuvA [Acidaminococcus fermentans DSM
20731]
Length = 204
Score = 38.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L ++PG G ++A R L L
Sbjct: 109 LTKLPGIGKKTAERLLLEL 127
>gi|332534227|ref|ZP_08410072.1| holliday junction DNA helicase RuvA [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036307|gb|EGI72778.1| holliday junction DNA helicase RuvA [Pseudoalteromonas haloplanktis
ANT/505]
Length = 205
Score = 38.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G ++A R L +
Sbjct: 109 SLVKLPGVGKKTAERLVLEM 128
>gi|300112852|ref|YP_003759427.1| Holliday junction DNA helicase RuvA [Nitrosococcus watsonii C-113]
gi|299538789|gb|ADJ27106.1| Holliday junction DNA helicase RuvA [Nitrosococcus watsonii C-113]
Length = 202
Score = 38.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGP 45
L R+PG G ++A R +++ +++LL
Sbjct: 109 SLTRLPGIGKKTAERL---IIEMRDRLLDR 135
>gi|322382934|ref|ZP_08056766.1| Holliday junction DNA helicase RuvA-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153054|gb|EFX45512.1| Holliday junction DNA helicase RuvA-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 207
Score = 38.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 14 IKILARIPGFGPRSARRA 31
+ L ++PG G ++A+R
Sbjct: 106 VGFLTKLPGIGKKTAQRI 123
>gi|225077350|ref|ZP_03720549.1| hypothetical protein NEIFLAOT_02410 [Neisseria flavescens
NRL30031/H210]
gi|224951342|gb|EEG32551.1| hypothetical protein NEIFLAOT_02410 [Neisseria flavescens
NRL30031/H210]
Length = 194
Score = 38.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ E+ I L+ PG G ++A R L L
Sbjct: 91 SAMNADELAQAIAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|220910036|ref|YP_002485347.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7425]
gi|219866647|gb|ACL46986.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7425]
Length = 207
Score = 38.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 8/37 (21%)
Query: 7 GKEIENLIKI--------LARIPGFGPRSARRATLHL 35
G E+ L++ L+R PG G ++A R L L
Sbjct: 96 GMELAELVQAIVSGNTRTLSRTPGVGSKTAERIALEL 132
>gi|218244912|ref|YP_002370283.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8801]
gi|257057937|ref|YP_003135825.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8802]
gi|226725438|sp|B7JZG7|RUVA_CYAP8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|218165390|gb|ACK64127.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8801]
gi|256588103|gb|ACU98989.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8802]
Length = 210
Score = 38.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
+E L++ L++ PG G ++A R L L
Sbjct: 101 LEELVQAIVNGNIRTLSQTPGVGQKTAERIALEL 134
>gi|29654859|ref|NP_820551.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 493]
gi|153208743|ref|ZP_01946981.1| Holliday junction DNA helicase RuvA [Coxiella burnetii 'MSU Goat
Q177']
gi|161831144|ref|YP_001597405.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 331]
gi|165918688|ref|ZP_02218774.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 334]
gi|212219280|ref|YP_002306067.1| Holliday junction DNA helicase RuvA [Coxiella burnetii CbuK_Q154]
gi|44888458|sp|Q83BE2|RUVA_COXBU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045751|sp|A9N9A2|RUVA_COXBR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698727|sp|B6J505|RUVA_COXB1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|29542128|gb|AAO91065.1| holliday junction DNA helicase [Coxiella burnetii RSA 493]
gi|120575775|gb|EAX32399.1| Holliday junction DNA helicase RuvA [Coxiella burnetii 'MSU Goat
Q177']
gi|161763011|gb|ABX78653.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 331]
gi|165917623|gb|EDR36227.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 334]
gi|212013542|gb|ACJ20922.1| holliday junction DNA helicase [Coxiella burnetii CbuK_Q154]
Length = 200
Score = 38.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L RIPG G ++A R
Sbjct: 107 IDQLVRIPGVGRKTAERLV 125
>gi|325205349|gb|ADZ00802.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
M04-240196]
Length = 194
Score = 38.0 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|304389092|ref|ZP_07371136.1| crossover junction ATP-dependent DNA helicase RuvA [Neisseria
meningitidis ATCC 13091]
gi|304336965|gb|EFM03155.1| crossover junction ATP-dependent DNA helicase RuvA [Neisseria
meningitidis ATCC 13091]
Length = 194
Score = 38.0 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|260598336|ref|YP_003210907.1| Holliday junction DNA helicase RuvA [Cronobacter turicensis z3032]
gi|260217513|emb|CBA31691.1| Holliday junction ATP-dependent DNA helicase ruvA [Cronobacter
turicensis z3032]
Length = 203
Score = 38.0 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRAT 32
++ ++ N ++ L ++PG G ++A R
Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERLV 125
>gi|156933560|ref|YP_001437476.1| Holliday junction DNA helicase RuvA [Cronobacter sakazakii ATCC
BAA-894]
gi|166230549|sp|A7MEA2|RUVA_ENTS8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|156531814|gb|ABU76640.1| hypothetical protein ESA_01380 [Cronobacter sakazakii ATCC BAA-894]
Length = 203
Score = 38.0 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRAT 32
++ ++ N ++ L ++PG G ++A R
Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERLV 125
>gi|119489537|ref|ZP_01622298.1| Holliday junction DNA helicase motor protein [Lyngbya sp. PCC 8106]
gi|119454616|gb|EAW35763.1| Holliday junction DNA helicase motor protein [Lyngbya sp. PCC 8106]
Length = 211
Score = 38.0 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 17 LARIPGFGPRSARRATLHL 35
LA+ PG G ++A+R L L
Sbjct: 115 LAKTPGVGTKTAQRIALEL 133
>gi|212212080|ref|YP_002303016.1| Holliday junction DNA helicase RuvA [Coxiella burnetii CbuG_Q212]
gi|226698728|sp|B6IYU3|RUVA_COXB2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|212010490|gb|ACJ17871.1| holliday junction DNA helicase [Coxiella burnetii CbuG_Q212]
Length = 200
Score = 38.0 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L RIPG G ++A R
Sbjct: 107 IDQLVRIPGVGRKTAERLV 125
>gi|304396235|ref|ZP_07378117.1| Holliday junction DNA helicase RuvA [Pantoea sp. aB]
gi|304356604|gb|EFM20969.1| Holliday junction DNA helicase RuvA [Pantoea sp. aB]
Length = 204
Score = 38.0 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 IASLVKLPGVGKKTAERLV 125
>gi|258514397|ref|YP_003190619.1| Holliday junction DNA helicase RuvA [Desulfotomaculum acetoxidans
DSM 771]
gi|257778102|gb|ACV61996.1| Holliday junction DNA helicase RuvA [Desulfotomaculum acetoxidans
DSM 771]
Length = 203
Score = 38.0 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK + ++PG G ++A+R L L
Sbjct: 107 IKAVMKVPGIGKKTAQRLILEL 128
>gi|169600163|ref|XP_001793504.1| hypothetical protein SNOG_02911 [Phaeosphaeria nodorum SN15]
gi|160705394|gb|EAT89642.2| hypothetical protein SNOG_02911 [Phaeosphaeria nodorum SN15]
Length = 1018
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 102 AVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMD 161
L V G + D P G+ I R+ K++ ++ T + +TTA I
Sbjct: 627 QYRGL--VFAGLVGMSD---PPRKGVAKAIRRLMAGKVKVIMI----TGDAETTAVAIGK 677
Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAI 195
L + + L + G ELD++ D + +AI
Sbjct: 678 SLGMPIIANSALGRSVICGDELDHMSDEELAQAI 711
>gi|121634135|ref|YP_974380.1| Holliday junction DNA helicase motor protein [Neisseria
meningitidis FAM18]
gi|166230574|sp|A1KRU4|RUVA_NEIMF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|120865841|emb|CAM09573.1| Holliday junction DNA helicase [Neisseria meningitidis FAM18]
Length = 194
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|326532252|dbj|BAK05055.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 401
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQ 41
+E+ +I+ L +PG GP+ A L + K +
Sbjct: 280 NRELPEVIEALCTLPGVGPKVAACIALFSLDKNQA 314
>gi|325128974|gb|EGC51825.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis N1568]
Length = 194
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|254674127|emb|CBA09911.1| holliday junction DNA helicase [Neisseria meningitidis alpha275]
gi|325145258|gb|EGC67537.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
M01-240013]
Length = 194
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|254468402|ref|ZP_05081808.1| Holliday junction DNA helicase RuvA [beta proteobacterium KB13]
gi|207087212|gb|EDZ64495.1| Holliday junction DNA helicase RuvA [beta proteobacterium KB13]
Length = 189
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Query: 14 IKILARIPGFGPRSARRATLHL-------VKKKEQLLGPLAEAMANIYNKVCL 59
+ +L +IPG G ++A R + L +++ Q L + + + +
Sbjct: 107 VSLLVKIPGIGRKTAERLIVELKDKQDLKLQQSSQHSKNLTD-IMDALEALGY 158
>gi|161870798|ref|YP_001599971.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis 053442]
gi|189045759|sp|A9M3B7|RUVA_NEIM0 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|161596351|gb|ABX74011.1| Holliday junction DNA helicase [Neisseria meningitidis 053442]
gi|308388484|gb|ADO30804.1| Holliday junction DNA helicase [Neisseria meningitidis alpha710]
gi|325130991|gb|EGC53718.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
OX99.30304]
gi|325131591|gb|EGC54298.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M6190]
gi|325143104|gb|EGC65451.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
961-5945]
gi|325143174|gb|EGC65520.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis
961-5945]
gi|325197549|gb|ADY93005.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis G2136]
Length = 194
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|153827628|ref|ZP_01980295.1| holliday junction ATP-dependent DNA helicase RuvA [Vibrio
cholerae MZO-2]
gi|149737900|gb|EDM52805.1| holliday junction ATP-dependent DNA helicase RuvA [Vibrio
cholerae MZO-2]
Length = 120
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 23 ISTLIKLPGVGKKTAERLV 41
>gi|194367363|ref|YP_002029973.1| DNA topoisomerase I [Stenotrophomonas maltophilia R551-3]
gi|194350167|gb|ACF53290.1| DNA topoisomerase I [Stenotrophomonas maltophilia R551-3]
Length = 824
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 21/102 (20%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVL------------GGSLSPLDRIGPEDIGIQSLI 131
+++VE A + Y VL G++ P + I
Sbjct: 5 LLIVESPAKAKTI---NKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKNE 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGIDV 168
+ ++ K +++ A EG+ + +I + LK +
Sbjct: 62 KHVDAIAKAAKSADDILLATDPDREGEAISWHIAEILKERGL 103
>gi|34499678|ref|NP_903893.1| Holliday junction DNA helicase RuvA [Chromobacterium violaceum ATCC
12472]
gi|44888390|sp|Q7NQB7|RUVA_CHRVO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|34105529|gb|AAQ61883.1| holliday junction DNA helicase [Chromobacterium violaceum ATCC
12472]
Length = 197
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK L+ +PG G ++A R L L
Sbjct: 107 IKRLSAVPGIGKKTAERLVLEL 128
>gi|218768952|ref|YP_002343464.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis Z2491]
gi|20455265|sp|Q9JSM5|RUVA_NEIMA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|121052960|emb|CAM09314.1| Holliday junction DNA helicase [Neisseria meningitidis Z2491]
gi|254671573|emb|CBA09225.1| holliday junction DNA helicase [Neisseria meningitidis alpha153]
gi|319411250|emb|CBY91657.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis WUE
2594]
Length = 194
Score = 37.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+T E+ + L+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|332285258|ref|YP_004417169.1| Holliday junction DNA helicase motor protein [Pusillimonas sp.
T7-7]
gi|330429211|gb|AEC20545.1| Holliday junction DNA helicase motor protein [Pusillimonas sp.
T7-7]
Length = 192
Score = 37.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
++ E+ N I L R+PG G ++A R L++ + +L G LA
Sbjct: 93 MSVDELANAITQQETGLLTRVPGIGKKTAERL---LLELRGKLGGDLAH 138
>gi|297539687|ref|YP_003675456.1| Holliday junction DNA helicase RuvA [Methylotenera sp. 301]
gi|297259034|gb|ADI30879.1| Holliday junction DNA helicase RuvA [Methylotenera sp. 301]
Length = 192
Score = 37.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 10/51 (19%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
++G I++L++ L R+PG G ++A R L L K + + L+
Sbjct: 90 LSGLSIDDLVQAVAMQDTAMLTRVPGVGKKTAERLLLEL--KDKFTVAGLS 138
>gi|295095544|emb|CBK84634.1| Holliday junction DNA helicase subunit RuvA [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 231
Score = 37.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ + N ++ L ++PG G ++A R +V+ K+
Sbjct: 120 MSAPQFVNAVEREDPAALIKLPGIGKKTAERL---IVEMKD 157
>gi|256375012|ref|YP_003098672.1| NUDIX hydrolase [Actinosynnema mirum DSM 43827]
gi|255919315|gb|ACU34826.1| NUDIX hydrolase [Actinosynnema mirum DSM 43827]
Length = 319
Score = 37.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 10/97 (10%)
Query: 30 RATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT------DPCAIC---IDQQR 80
RA L+ L A A+ + + C++CG + C+ C +
Sbjct: 120 RAVGALLDDTGAGLFTSAVALFHWHRSARFCAVCGGATRSVKAGWARECSACGREEYPRT 179
Query: 81 DASVIIVVEDVADLWALERSKAV-NALYHVLGGSLSP 116
DA+VI +V D AD L R + Y VL G +
Sbjct: 180 DAAVICLVHDGADRVLLARGEGWPEGRYSVLAGFVEA 216
>gi|312892324|ref|ZP_07751819.1| Holliday junction DNA helicase subunit RuvA [Mucilaginibacter
paludis DSM 18603]
gi|311295108|gb|EFQ72282.1| Holliday junction DNA helicase subunit RuvA [Mucilaginibacter
paludis DSM 18603]
Length = 194
Score = 37.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL---VKKK 39
IT EI+N I ++ RI G GP+SA+R L L ++K
Sbjct: 90 SSITPAEIQNAIIKGDVPLIQRIKGIGPKSAQRIVLELQDKLRKD 134
>gi|269963130|ref|ZP_06177465.1| Holliday junction DNA helicase motor protein [Vibrio harveyi 1DA3]
gi|269832094|gb|EEZ86218.1| Holliday junction DNA helicase motor protein [Vibrio harveyi 1DA3]
Length = 223
Score = 37.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 126 ISTLVKLPGVGKKTAERLV 144
>gi|254506186|ref|ZP_05118330.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus 16]
gi|219551004|gb|EED27985.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus 16]
Length = 223
Score = 37.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 126 ISTLVKLPGVGKKTAERLV 144
>gi|156973890|ref|YP_001444797.1| Holliday junction DNA helicase motor protein [Vibrio harveyi ATCC
BAA-1116]
gi|156525484|gb|ABU70570.1| hypothetical protein VIBHAR_01600 [Vibrio harveyi ATCC BAA-1116]
Length = 223
Score = 37.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 126 ISTLVKLPGVGKKTAERLV 144
>gi|114563352|ref|YP_750865.1| Holliday junction DNA helicase RuvA [Shewanella frigidimarina NCIMB
400]
gi|122299598|sp|Q081N8|RUVA_SHEFN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|114334645|gb|ABI72027.1| Holliday junction DNA helicase RuvA [Shewanella frigidimarina NCIMB
400]
Length = 205
Score = 37.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R ++ +++L L +
Sbjct: 107 IATLVKLPGVGKKTAERLV---IEMRDKLKSLLEAS 139
>gi|88861319|ref|ZP_01135950.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas
tunicata D2]
gi|88816698|gb|EAR26522.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas
tunicata D2]
Length = 205
Score = 37.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPL 46
L ++PG G ++A R L + + + L
Sbjct: 109 SLVKLPGVGKKTAERLVLEMKDRLKDWGRDL 139
>gi|251789856|ref|YP_003004577.1| Holliday junction DNA helicase RuvA [Dickeya zeae Ech1591]
gi|247538477|gb|ACT07098.1| Holliday junction DNA helicase RuvA [Dickeya zeae Ech1591]
Length = 205
Score = 37.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRAT 32
M + +E I L ++PG G ++A R
Sbjct: 93 MSAQQFVSAVERQEINTLVKLPGVGKKTAERLV 125
>gi|332298112|ref|YP_004440034.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema
brennaborense DSM 12168]
gi|332181215|gb|AEE16903.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema
brennaborense DSM 12168]
Length = 205
Score = 37.6 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 11 ENLIKILARIPGFGPRSARRATLHL 35
E+L L R+PG G ++A++ L L
Sbjct: 105 EDL-SQLERLPGVGKKTAQKMMLTL 128
>gi|313202065|ref|YP_004040723.1| holliday junction DNA helicase ruva [Methylovorus sp. MP688]
gi|312441381|gb|ADQ85487.1| Holliday junction DNA helicase RuvA [Methylovorus sp. MP688]
Length = 192
Score = 37.6 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
+L R+PG G ++A R L L K + + LA +
Sbjct: 109 LLTRVPGIGKKTAERLLLEL--KDKFSVDGLAAPAGQAKS 146
>gi|319939099|ref|ZP_08013463.1| DNA topoisomerase [Streptococcus anginosus 1_2_62CV]
gi|319812149|gb|EFW08415.1| DNA topoisomerase [Streptococcus anginosus 1_2_62CV]
Length = 694
Score = 37.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + PE I I+
Sbjct: 15 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPEYINIRGKG 71
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
SLI + E KK +++ A EG+ + ++ L
Sbjct: 72 SLINDLKKEAKKAKQVYLASDPDREGEAISWHLAHIL 108
>gi|153832528|ref|ZP_01985195.1| holliday junction DNA helicase RuvA [Vibrio harveyi HY01]
gi|148871323|gb|EDL70195.1| holliday junction DNA helicase RuvA [Vibrio harveyi HY01]
Length = 223
Score = 37.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 126 ISTLVKLPGVGKKTAERLV 144
>gi|197335439|ref|YP_002155714.1| holliday junction DNA helicase RuvA [Vibrio fischeri MJ11]
gi|226698745|sp|B5FCQ1|RUVA_VIBFM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|197316929|gb|ACH66376.1| holliday junction DNA helicase RuvA [Vibrio fischeri MJ11]
Length = 207
Score = 37.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|85373789|ref|YP_457851.1| DNA topoisomerase I [Erythrobacter litoralis HTCC2594]
gi|84786872|gb|ABC63054.1| DNA topoisomeraseI [Erythrobacter litoralis HTCC2594]
Length = 845
Score = 37.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 24/111 (21%)
Query: 84 VIIVVEDVADLWALERSKAVNALYH-VLGGS-----LSPLDR--IGPEDIGIQSLIERIE 135
+++VE A +E+ VL L P D ED + + R +
Sbjct: 2 QLVIVESPAKAKTIEK---YLGKDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDK 58
Query: 136 VKKIREL----------IFAISATIEGQTTAHYIMDKL---KGIDVKITRL 173
K+ +E+ + A EG+ + ++ + L K + K+ R+
Sbjct: 59 QKRFKEISDAAKQADRLVLATDPDREGEAISWHVQELLAKRKALPAKVDRV 109
>gi|312127083|ref|YP_003991957.1| helix-hairpin-helix motif protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777102|gb|ADQ06588.1| helix-hairpin-helix motif protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 415
Score = 37.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SARR H + + L + +
Sbjct: 320 EELIRVPGIGIKSARRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361
>gi|294635834|ref|ZP_06714289.1| holliday junction DNA helicase RuvA [Edwardsiella tarda ATCC 23685]
gi|291090806|gb|EFE23367.1| holliday junction DNA helicase RuvA [Edwardsiella tarda ATCC 23685]
Length = 195
Score = 37.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 100 VAALIKLPGVGKKTAERLV 118
>gi|194766770|ref|XP_001965497.1| GF22525 [Drosophila ananassae]
gi|190619488|gb|EDV35012.1| GF22525 [Drosophila ananassae]
Length = 703
Score = 37.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 IKILARIPGFGPRSARRAT 32
+K L ++PG GP++A
Sbjct: 648 VKELKKLPGIGPKTAASLA 666
>gi|225164626|ref|ZP_03726870.1| Holliday junction resolvasome DNA-binding subunit-like protein
[Opitutaceae bacterium TAV2]
gi|224800771|gb|EEG19123.1| Holliday junction resolvasome DNA-binding subunit-like protein
[Opitutaceae bacterium TAV2]
Length = 219
Score = 37.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+++ +E I+ L++ PG G ++A R + L
Sbjct: 92 SRMSLPVLEGAIRAGDISSLSKCPGIGKKTAERLVVEL 129
>gi|15639532|ref|NP_218982.1| Holliday junction DNA helicase (ruvA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025771|ref|YP_001933543.1| Holliday junction DNA helicase, subunit A [Treponema pallidum
subsp. pallidum SS14]
gi|6094206|sp|O83554|RUVA_TREPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560146|sp|B2S3D5|RUVA_TREPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|3322833|gb|AAC65527.1| Holliday junction DNA helicase (ruvA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018346|gb|ACD70964.1| Holliday junction DNA helicase, subunit A [Treponema pallidum
subsp. pallidum SS14]
gi|291059920|gb|ADD72655.1| Holliday junction DNA helicase RuvA [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 227
Score = 37.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L RIPG G ++A+R L L
Sbjct: 109 ALQRIPGIGKKTAQRMLLAL 128
>gi|226945719|ref|YP_002800792.1| Holliday junction DNA helicase RuvA [Azotobacter vinelandii DJ]
gi|226720646|gb|ACO79817.1| holliday junction DNA helicase RuvA [Azotobacter vinelandii DJ]
Length = 204
Score = 37.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENL--------IKILARIPGFGPRSARRA 31
++ E++ L IK L R+PG G ++A R
Sbjct: 93 MSSLELDELVRCVQAGDIKALTRVPGVGKKTAERL 127
>gi|332702395|ref|ZP_08422483.1| DNA topoisomerase I [Desulfovibrio africanus str. Walvis Bay]
gi|332552544|gb|EGJ49588.1| DNA topoisomerase I [Desulfovibrio africanus str. Walvis Bay]
Length = 766
Score = 37.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 21/107 (19%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI----- 139
+I+VE A + + K +++ S+ + + P IG+ K+
Sbjct: 5 LIIVESPAKVKTI---KKFLGRDYMVEASVGHVRDLPPNKIGVDEERGFTPDYKVIPGKQ 61
Query: 140 -------------RELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+ A EG+ A ++ + + +++R+
Sbjct: 62 KVVAKLKAAADQAEHIYLAPDPDREGEAIAWHVAHLIGDKNKQVSRI 108
>gi|170726918|ref|YP_001760944.1| Holliday junction DNA helicase RuvA [Shewanella woodyi ATCC 51908]
gi|229560127|sp|B1KGY0|RUVA_SHEWM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|169812265|gb|ACA86849.1| Holliday junction DNA helicase RuvA [Shewanella woodyi ATCC 51908]
Length = 205
Score = 37.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPL 46
I L ++PG G ++A R LV+ +++L L
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKLKSLL 136
>gi|73540190|ref|YP_294710.1| Holliday junction DNA helicase motor protein [Ralstonia eutropha
JMP134]
gi|90135661|sp|Q475R7|RUVA_RALEJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|72117603|gb|AAZ59866.1| Holliday junction DNA helicase subunit RuvA [Ralstonia eutropha
JMP134]
Length = 193
Score = 37.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
++ E+ I + L R+PG G ++A R +++ K +L L A
Sbjct: 93 MSVSELAQAITLQEAGRLTRVPGIGKKTAERL---MLELKGKLGAELGHA 139
>gi|37199217|dbj|BAC95049.1| holliday junction resolvasome, DNA-binding subunit [Vibrio
vulnificus YJ016]
Length = 206
Score = 37.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 109 ISTLVKLPGVGKKTAERLV 127
>gi|77460629|ref|YP_350136.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens Pf0-1]
gi|90135610|sp|Q3K7V9|RUVA_PSEPF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|77384632|gb|ABA76145.1| holliday junction helicase subunit B [Pseudomonas fluorescens
Pf0-1]
Length = 202
Score = 37.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++ E++ LI+ L ++PG G ++A R
Sbjct: 90 MSSLEVDELIRCVQSQDTSALTKVPGVGKKTAERL 124
>gi|308049716|ref|YP_003913282.1| Holliday junction DNA helicase subunit RuvA [Ferrimonas balearica
DSM 9799]
gi|307631906|gb|ADN76208.1| Holliday junction DNA helicase subunit RuvA [Ferrimonas balearica
DSM 9799]
Length = 207
Score = 37.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITGLTKLPGVGKKTAERLV 125
>gi|239995979|ref|ZP_04716503.1| Holliday junction DNA helicase motor protein [Alteromonas macleodii
ATCC 27126]
Length = 206
Score = 37.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
+ L +PG G ++A R + L + L +A
Sbjct: 107 VSALVSLPGIGKKTAERLVVEL----KDRLAKFGKA 138
>gi|59711558|ref|YP_204334.1| Holliday junction DNA helicase motor protein [Vibrio fischeri
ES114]
gi|71649480|sp|Q5E6A0|RUVA_VIBF1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|59479659|gb|AAW85446.1| component of RuvABC resolvasome, regulatory subunit [Vibrio
fischeri ES114]
Length = 207
Score = 37.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|71909671|ref|YP_287258.1| Holliday junction DNA helicase motor protein [Dechloromonas
aromatica RCB]
gi|90134857|sp|Q478E3|RUVA_DECAR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|71849292|gb|AAZ48788.1| Holliday junction DNA helicase subunit RuvA [Dechloromonas
aromatica RCB]
Length = 192
Score = 37.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
+ +E+ LI +IPG G ++A R L++ K +L ++ +
Sbjct: 99 AAAVAQQELGRLI----KIPGIGKKTAERL---LLELKGKLADATGVSLHPAVDD 146
>gi|157371017|ref|YP_001479006.1| Holliday junction DNA helicase RuvA [Serratia proteamaculans 568]
gi|167012663|sp|A8GFI8|RUVA_SERP5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|157322781|gb|ABV41878.1| Holliday junction DNA helicase RuvA [Serratia proteamaculans 568]
Length = 203
Score = 37.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITSLVKLPGVGKKTAERLV 125
>gi|323186363|gb|EFZ71713.1| holliday junction DNA helicase RuvA [Escherichia coli 1357]
Length = 187
Score = 37.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 77 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 114
>gi|331663357|ref|ZP_08364267.1| holliday junction DNA helicase RuvA [Escherichia coli TA143]
gi|331059156|gb|EGI31133.1| holliday junction DNA helicase RuvA [Escherichia coli TA143]
Length = 188
Score = 37.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 78 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 115
>gi|281601276|gb|ADA74260.1| Holliday junction ATP-dependent DNA helicase ruvA [Shigella
flexneri 2002017]
gi|332766837|gb|EGJ97038.1| holliday junction DNA helicase RuvA [Shigella flexneri 2930-71]
Length = 187
Score = 37.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 77 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 114
>gi|7766817|pdb|1D8L|A Chain A, E. Coli Holliday Junction Binding Protein Ruva Nh2 Region
Lacking Domain Iii
gi|7766818|pdb|1D8L|B Chain B, E. Coli Holliday Junction Binding Protein Ruva Nh2 Region
Lacking Domain Iii
Length = 149
Score = 37.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|323496589|ref|ZP_08101642.1| Holliday junction DNA helicase RuvA [Vibrio sinaloensis DSM 21326]
gi|323318335|gb|EGA71293.1| Holliday junction DNA helicase RuvA [Vibrio sinaloensis DSM 21326]
Length = 205
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|148977429|ref|ZP_01814029.1| Holliday junction DNA helicase motor protein [Vibrionales bacterium
SWAT-3]
gi|145963381|gb|EDK28646.1| Holliday junction DNA helicase motor protein [Vibrionales bacterium
SWAT-3]
Length = 203
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|197119680|ref|YP_002140107.1| Holliday junction DNA helicase RuvA [Geobacter bemidjiensis Bem]
gi|226698732|sp|B5EAH2|RUVA_GEOBB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|197089040|gb|ACH40311.1| Holliday junction DNA helicase RuvA [Geobacter bemidjiensis Bem]
Length = 199
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
L+ IPG G ++A R L L ++ + L A
Sbjct: 110 LSAIPGIGKKTAERLVLEL----KEKMKKLGLAQPQA 142
>gi|27365489|ref|NP_761017.1| Holliday junction DNA helicase RuvA [Vibrio vulnificus CMCP6]
gi|161486619|ref|NP_935078.2| Holliday junction DNA helicase motor protein [Vibrio vulnificus
YJ016]
gi|320155872|ref|YP_004188251.1| Holliday junction DNA helicase RuvA [Vibrio vulnificus MO6-24/O]
gi|29611844|sp|Q8DAN4|RUVA_VIBVU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|44888369|sp|Q7MJ77|RUVA_VIBVY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|27361637|gb|AAO10544.1| Holliday junction DNA helicase RuvA [Vibrio vulnificus CMCP6]
gi|319931184|gb|ADV86048.1| holliday junction DNA helicase RuvA [Vibrio vulnificus MO6-24/O]
Length = 204
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|86146483|ref|ZP_01064806.1| Holliday junction DNA helicase motor protein [Vibrio sp. MED222]
gi|218709101|ref|YP_002416722.1| Holliday junction DNA helicase RuvA [Vibrio splendidus LGP32]
gi|254767400|sp|B7VMI3|RUVA_VIBSL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|85835746|gb|EAQ53881.1| Holliday junction DNA helicase motor protein [Vibrio sp. MED222]
gi|218322120|emb|CAV18233.1| Holliday junction DNA helicase ruvA [Vibrio splendidus LGP32]
Length = 203
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|310831073|ref|YP_003969716.1| putative DNA topoisomerase IA [Cafeteria roenbergensis virus
BV-PW1]
gi|309386257|gb|ADO67117.1| putative DNA topoisomerase IA [Cafeteria roenbergensis virus
BV-PW1]
Length = 747
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 26/112 (23%)
Query: 84 VIIVVEDVADLWALERSKAVNA-LYHV------------------LGGSLSPLDRIGPED 124
+++VE +++ ++ YHV L + +P I P+
Sbjct: 2 KLVIVESPG---KIKKIQSYLGDNYHVEASFGHIRDLDPNGLSVDLDNNFNPTYVISPDK 58
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK---GIDVKITRL 173
I +E K E I A EG+ A+ + + LK + T +
Sbjct: 59 SKIVDKLE-SISNKAEETILAADQDREGEAIAYSLKEVLKLKNPPRIIFTEI 109
>gi|261252501|ref|ZP_05945074.1| holliday junction DNA helicase RuvA [Vibrio orientalis CIP 102891]
gi|260935892|gb|EEX91881.1| holliday junction DNA helicase RuvA [Vibrio orientalis CIP 102891]
Length = 205
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|261379647|ref|ZP_05984220.1| holliday junction DNA helicase RuvA [Neisseria subflava NJ9703]
gi|284798132|gb|EFC53479.1| holliday junction DNA helicase RuvA [Neisseria subflava NJ9703]
Length = 194
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ E+ I L+ PG G ++A R L L
Sbjct: 93 MNADELAQAIAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|209695355|ref|YP_002263284.1| Holliday junction DNA helicase RuvA [Aliivibrio salmonicida
LFI1238]
gi|226698724|sp|B6EGJ3|RUVA_ALISL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|208009307|emb|CAQ79573.1| holliday junction ATP-dependent DNA helicase RuvA [Aliivibrio
salmonicida LFI1238]
Length = 206
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|163802051|ref|ZP_02195947.1| Holliday junction DNA helicase motor protein [Vibrio sp. AND4]
gi|159174192|gb|EDP59000.1| Holliday junction DNA helicase motor protein [Vibrio sp. AND4]
Length = 204
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|84388519|ref|ZP_00991066.1| Holliday junction DNA helicase motor protein [Vibrio splendidus
12B01]
gi|84377068|gb|EAP93939.1| Holliday junction DNA helicase motor protein [Vibrio splendidus
12B01]
Length = 203
Score = 37.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|262171932|ref|ZP_06039610.1| hypothetical protein VII_002757 [Vibrio mimicus MB-451]
gi|261893008|gb|EEY38994.1| hypothetical protein VII_002757 [Vibrio mimicus MB-451]
Length = 37
Score = 37.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 6 TGKEIENLIKILARIPGFGPR-SA 28
T +E+L++ L +PG GP+ SA
Sbjct: 3 TSHMLEHLMEALRCLPGVGPKISA 26
>gi|253699567|ref|YP_003020756.1| Holliday junction DNA helicase RuvA [Geobacter sp. M21]
gi|259495645|sp|C6E1S9|RUVA_GEOSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|251774417|gb|ACT16998.1| Holliday junction DNA helicase RuvA [Geobacter sp. M21]
Length = 199
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
L+ IPG G ++A R L L ++ + L A
Sbjct: 110 LSAIPGIGKKTAERLVLEL----KEKMKKLGLAQPQA 142
>gi|77163677|ref|YP_342202.1| DNA recombination protein, RuvA [Nitrosococcus oceani ATCC 19707]
gi|254435109|ref|ZP_05048616.1| Holliday junction DNA helicase RuvA [Nitrosococcus oceani AFC27]
gi|90135436|sp|Q3JES4|RUVA_NITOC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|76881991|gb|ABA56672.1| Holliday junction DNA helicase subunit RuvA [Nitrosococcus oceani
ATCC 19707]
gi|207088220|gb|EDZ65492.1| Holliday junction DNA helicase RuvA [Nitrosococcus oceani AFC27]
Length = 199
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 16 ILARIPGFGPRSARRATLH----LVKKKEQLL 43
L R+PG G ++A R + L+ E +
Sbjct: 109 SLTRLPGVGKKTAERLIVEMRDRLLDMPESGV 140
>gi|298370450|ref|ZP_06981766.1| holliday junction DNA helicase RuvA [Neisseria sp. oral taxon 014
str. F0314]
gi|298281910|gb|EFI23399.1| holliday junction DNA helicase RuvA [Neisseria sp. oral taxon 014
str. F0314]
Length = 193
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
++ E+ + L+ PG G ++A R L L
Sbjct: 91 SAMSADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|269138790|ref|YP_003295491.1| holliday junction resolvasome, DNA-binding subunit [Edwardsiella
tarda EIB202]
gi|267984451|gb|ACY84280.1| holliday junction resolvasome, DNA-binding subunit [Edwardsiella
tarda EIB202]
gi|304558782|gb|ADM41446.1| Holliday junction DNA helicase RuvA [Edwardsiella tarda FL6-60]
Length = 202
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VAALVKLPGVGKKTAERLV 125
>gi|163783946|ref|ZP_02178915.1| Holliday junction resolvasome DNA-binding subunit [Hydrogenivirga
sp. 128-5-R1-1]
gi|159880781|gb|EDP74316.1| Holliday junction resolvasome DNA-binding subunit [Hydrogenivirga
sp. 128-5-R1-1]
Length = 180
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I +L+ +PG G ++A R L L
Sbjct: 101 IDLLSSVPGIGKKTASRIILEL 122
>gi|315180569|gb|ADT87483.1| Holliday junction DNA helicase motor protein [Vibrio furnissii NCTC
11218]
Length = 205
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|121535579|ref|ZP_01667386.1| Holliday junction DNA helicase RuvA [Thermosinus carboxydivorans
Nor1]
gi|121305819|gb|EAX46754.1| Holliday junction DNA helicase RuvA [Thermosinus carboxydivorans
Nor1]
Length = 201
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ +L +IPG G ++A R L L
Sbjct: 106 VSLLTKIPGIGKKTAERIILEL 127
>gi|312882586|ref|ZP_07742326.1| Holliday junction DNA helicase RuvA [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369746|gb|EFP97258.1| Holliday junction DNA helicase RuvA [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 205
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|260779157|ref|ZP_05888049.1| holliday junction DNA helicase RuvA [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605321|gb|EEX31616.1| holliday junction DNA helicase RuvA [Vibrio coralliilyticus ATCC
BAA-450]
Length = 224
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 126 ISTLVKLPGVGKKTAERLV 144
>gi|254449000|ref|ZP_05062454.1| Holliday junction DNA helicase RuvA [gamma proteobacterium
HTCC5015]
gi|198261394|gb|EDY85685.1| Holliday junction DNA helicase RuvA [gamma proteobacterium
HTCC5015]
Length = 205
Score = 37.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 16 ILARIPGFGPRSARRAT 32
L ++PG G ++A R
Sbjct: 109 ALTKLPGVGKKTAERLV 125
>gi|161502989|ref|YP_001570101.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160864336|gb|ABX20959.1| hypothetical protein SARI_01051 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 228
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 118 MSAQQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 155
>gi|297579365|ref|ZP_06941293.1| Holliday junction DNA helicase RuvA [Vibrio cholerae RC385]
gi|297536959|gb|EFH75792.1| Holliday junction DNA helicase RuvA [Vibrio cholerae RC385]
Length = 204
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|229515226|ref|ZP_04404686.1| holliday junction DNA helicase RuvA [Vibrio cholerae TMA 21]
gi|229347931|gb|EEO12890.1| holliday junction DNA helicase RuvA [Vibrio cholerae TMA 21]
Length = 204
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|153217384|ref|ZP_01951135.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 1587]
gi|153830574|ref|ZP_01983241.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 623-39]
gi|229520306|ref|ZP_04409732.1| holliday junction DNA helicase RuvA [Vibrio cholerae TM 11079-80]
gi|229523864|ref|ZP_04413269.1| holliday junction DNA helicase RuvA [Vibrio cholerae bv. albensis
VL426]
gi|229529131|ref|ZP_04418521.1| holliday junction DNA helicase RuvA [Vibrio cholerae 12129(1)]
gi|124113602|gb|EAY32422.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 1587]
gi|148873936|gb|EDL72071.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 623-39]
gi|229332905|gb|EEN98391.1| holliday junction DNA helicase RuvA [Vibrio cholerae 12129(1)]
gi|229337445|gb|EEO02462.1| holliday junction DNA helicase RuvA [Vibrio cholerae bv. albensis
VL426]
gi|229342672|gb|EEO07664.1| holliday junction DNA helicase RuvA [Vibrio cholerae TM 11079-80]
gi|327484398|gb|AEA78805.1| Holliday junction DNA helicase RuvA [Vibrio cholerae LMA3894-4]
Length = 204
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|15641848|ref|NP_231480.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121591344|ref|ZP_01678632.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 2740-80]
gi|121730273|ref|ZP_01682649.1| Holliday junction DNA helicase RuvA [Vibrio cholerae V52]
gi|147675231|ref|YP_001217380.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O395]
gi|153824054|ref|ZP_01976721.1| Holliday junction DNA helicase RuvA [Vibrio cholerae B33]
gi|227081975|ref|YP_002810526.1| Holliday junction DNA helicase RuvA [Vibrio cholerae M66-2]
gi|229508057|ref|ZP_04397562.1| holliday junction DNA helicase RuvA [Vibrio cholerae BX 330286]
gi|229511704|ref|ZP_04401183.1| holliday junction DNA helicase RuvA [Vibrio cholerae B33]
gi|229518843|ref|ZP_04408286.1| holliday junction DNA helicase RuvA [Vibrio cholerae RC9]
gi|229607618|ref|YP_002878266.1| Holliday junction DNA helicase RuvA [Vibrio cholerae MJ-1236]
gi|254848932|ref|ZP_05238282.1| holliday junction DNA helicase motor protein [Vibrio cholerae MO10]
gi|255745394|ref|ZP_05419343.1| holliday junction DNA helicase RuvA [Vibrio cholera CIRS 101]
gi|298498115|ref|ZP_07007922.1| Holliday junction DNA helicase RuvA [Vibrio cholerae MAK 757]
gi|20455267|sp|Q9KR01|RUVA_VIBCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|172047659|sp|A5F761|RUVA_VIBC3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254767399|sp|C3LNE9|RUVA_VIBCM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|9656374|gb|AAF94994.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121546808|gb|EAX56974.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 2740-80]
gi|121627975|gb|EAX60536.1| Holliday junction DNA helicase RuvA [Vibrio cholerae V52]
gi|126518426|gb|EAZ75649.1| Holliday junction DNA helicase RuvA [Vibrio cholerae B33]
gi|146317114|gb|ABQ21653.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O395]
gi|227009863|gb|ACP06075.1| Holliday junction DNA helicase RuvA [Vibrio cholerae M66-2]
gi|227013744|gb|ACP09954.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O395]
gi|229343532|gb|EEO08507.1| holliday junction DNA helicase RuvA [Vibrio cholerae RC9]
gi|229351669|gb|EEO16610.1| holliday junction DNA helicase RuvA [Vibrio cholerae B33]
gi|229355562|gb|EEO20483.1| holliday junction DNA helicase RuvA [Vibrio cholerae BX 330286]
gi|229370273|gb|ACQ60696.1| holliday junction DNA helicase RuvA [Vibrio cholerae MJ-1236]
gi|254844637|gb|EET23051.1| holliday junction DNA helicase motor protein [Vibrio cholerae MO10]
gi|255737224|gb|EET92620.1| holliday junction DNA helicase RuvA [Vibrio cholera CIRS 101]
gi|297542448|gb|EFH78498.1| Holliday junction DNA helicase RuvA [Vibrio cholerae MAK 757]
Length = 204
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|253997451|ref|YP_003049515.1| Holliday junction DNA helicase RuvA [Methylotenera mobilis JLW8]
gi|253984130|gb|ACT48988.1| Holliday junction DNA helicase RuvA [Methylotenera mobilis JLW8]
Length = 192
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52
++G I++L++ L R+PG G ++A R L++ K++ AM
Sbjct: 90 LSGLSIDDLVQAVALQEPSMLTRVPGVGKKTAERL---LLELKDKFTIDGVAAMNE 142
>gi|255533713|ref|YP_003094085.1| Holliday junction DNA helicase RuvA [Pedobacter heparinus DSM 2366]
gi|255346697|gb|ACU06023.1| Holliday junction DNA helicase RuvA [Pedobacter heparinus DSM 2366]
Length = 194
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKK-KEQLLGPLAEA 49
M IT EI+ I ++ RI G G +SA+R L L K K++ G L A
Sbjct: 88 MLSSITPVEIQTAIVNADLALIQRIKGIGAKSAQRLVLELQDKLKKEGSGSLIAA 142
>gi|218548578|ref|YP_002382369.1| Holliday junction DNA helicase RuvA [Escherichia fergusonii ATCC
35469]
gi|226725445|sp|B7LPI3|RUVA_ESCF3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|218356119|emb|CAQ88736.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
fergusonii ATCC 35469]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|294141122|ref|YP_003557100.1| Holliday junction DNA helicase RuvA [Shewanella violacea DSS12]
gi|293327591|dbj|BAJ02322.1| Holliday junction DNA helicase RuvA [Shewanella violacea DSS12]
Length = 205
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R L++ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LIEM-RDKLKSLMEA 138
>gi|288939916|ref|YP_003442156.1| Holliday junction DNA helicase RuvA [Allochromatium vinosum DSM
180]
gi|288895288|gb|ADC61124.1| Holliday junction DNA helicase RuvA [Allochromatium vinosum DSM
180]
Length = 211
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKE 40
L R+PG G ++A R +++ ++
Sbjct: 109 ALTRLPGIGKKTAERL---IIEMRD 130
>gi|301645623|ref|ZP_07245552.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 146-1]
gi|301076155|gb|EFK90961.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 146-1]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|300951483|ref|ZP_07165318.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 116-1]
gi|300956626|ref|ZP_07168905.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 175-1]
gi|300316608|gb|EFJ66392.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 175-1]
gi|300449233|gb|EFK12853.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 116-1]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|194433948|ref|ZP_03066220.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae 1012]
gi|194417820|gb|EDX33917.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae 1012]
gi|332095232|gb|EGJ00259.1| holliday junction DNA helicase RuvA [Shigella dysenteriae 155-74]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|191168085|ref|ZP_03029884.1| Holliday junction DNA helicase RuvA [Escherichia coli B7A]
gi|256017935|ref|ZP_05431800.1| Holliday junction DNA helicase RuvA [Shigella sp. D9]
gi|260855801|ref|YP_003229692.1| component of RuvABC resolvasome, regulatory subunit RuvA
[Escherichia coli O26:H11 str. 11368]
gi|260868396|ref|YP_003234798.1| component of RuvABC resolvasome, regulatory subunit RuvA
[Escherichia coli O111:H- str. 11128]
gi|300816247|ref|ZP_07096469.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 107-1]
gi|300924950|ref|ZP_07140877.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 182-1]
gi|301327650|ref|ZP_07220858.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 78-1]
gi|307314227|ref|ZP_07593837.1| Holliday junction DNA helicase RuvA [Escherichia coli W]
gi|309794242|ref|ZP_07688666.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 145-7]
gi|332278969|ref|ZP_08391382.1| holliday junction helicase subunit B [Shigella sp. D9]
gi|190901883|gb|EDV61633.1| Holliday junction DNA helicase RuvA [Escherichia coli B7A]
gi|257754450|dbj|BAI25952.1| component of RuvABC resolvasome, regulatory subunit RuvA
[Escherichia coli O26:H11 str. 11368]
gi|257764752|dbj|BAI36247.1| component of RuvABC resolvasome, regulatory subunit RuvA
[Escherichia coli O111:H- str. 11128]
gi|300418886|gb|EFK02197.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 182-1]
gi|300530937|gb|EFK51999.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 107-1]
gi|300845798|gb|EFK73558.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 78-1]
gi|306906196|gb|EFN36714.1| Holliday junction DNA helicase RuvA [Escherichia coli W]
gi|308122147|gb|EFO59409.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 145-7]
gi|315061167|gb|ADT75494.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli W]
gi|320198055|gb|EFW72663.1| Holliday junction DNA helicase RuvA [Escherichia coli EC4100B]
gi|323152650|gb|EFZ38926.1| holliday junction DNA helicase RuvA [Escherichia coli EPECa14]
gi|323180658|gb|EFZ66203.1| holliday junction DNA helicase RuvA [Escherichia coli 1180]
gi|323378256|gb|ADX50524.1| Holliday junction DNA helicase RuvA [Escherichia coli KO11]
gi|324113597|gb|EGC07572.1| Holliday junction DNA helicase RuvA [Escherichia fergusonii B253]
gi|324118921|gb|EGC12810.1| Holliday junction DNA helicase RuvA [Escherichia coli E1167]
gi|332101321|gb|EGJ04667.1| holliday junction helicase subunit B [Shigella sp. D9]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|157161330|ref|YP_001458648.1| Holliday junction DNA helicase RuvA [Escherichia coli HS]
gi|170019794|ref|YP_001724748.1| Holliday junction DNA helicase RuvA [Escherichia coli ATCC 8739]
gi|188494515|ref|ZP_03001785.1| Holliday junction DNA helicase RuvA [Escherichia coli 53638]
gi|193069860|ref|ZP_03050809.1| Holliday junction DNA helicase RuvA [Escherichia coli E110019]
gi|167012659|sp|A8A161|RUVA_ECOHS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045753|sp|B1J0M7|RUVA_ECOLC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|157067010|gb|ABV06265.1| Holliday junction DNA helicase RuvA [Escherichia coli HS]
gi|169754722|gb|ACA77421.1| Holliday junction DNA helicase RuvA [Escherichia coli ATCC 8739]
gi|188489714|gb|EDU64817.1| Holliday junction DNA helicase RuvA [Escherichia coli 53638]
gi|192956760|gb|EDV87214.1| Holliday junction DNA helicase RuvA [Escherichia coli E110019]
gi|309702085|emb|CBJ01399.1| holliday junction ATP-dependent DNA helicase [Escherichia coli ETEC
H10407]
gi|323937119|gb|EGB33399.1| Holliday junction DNA helicase RuvA [Escherichia coli E1520]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|30063272|ref|NP_837443.1| Holliday junction DNA helicase RuvA [Shigella flexneri 2a str.
2457T]
gi|30041524|gb|AAP17252.1| Holliday junction helicase subunit B [Shigella flexneri 2a str.
2457T]
gi|313650643|gb|EFS15045.1| holliday junction DNA helicase RuvA [Shigella flexneri 2a str.
2457T]
gi|332757632|gb|EGJ87965.1| holliday junction DNA helicase RuvA [Shigella flexneri 2747-71]
gi|332758049|gb|EGJ88375.1| holliday junction DNA helicase RuvA [Shigella flexneri K-671]
gi|333004779|gb|EGK24301.1| holliday junction DNA helicase RuvA [Shigella flexneri K-218]
gi|333018630|gb|EGK37924.1| holliday junction DNA helicase RuvA [Shigella flexneri K-304]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|82776447|ref|YP_402796.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae Sd197]
gi|309789257|ref|ZP_07683850.1| holliday junction DNA helicase RuvA [Shigella dysenteriae 1617]
gi|90135814|sp|Q32HA0|RUVA_SHIDS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|81240595|gb|ABB61305.1| Holliday junction helicase subunit B [Shigella dysenteriae Sd197]
gi|308923011|gb|EFP68525.1| holliday junction DNA helicase RuvA [Shigella dysenteriae 1617]
Length = 203
Score = 37.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|194889514|ref|XP_001977101.1| GG18431 [Drosophila erecta]
gi|190648750|gb|EDV46028.1| GG18431 [Drosophila erecta]
Length = 610
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLH 34
++ ++ + L +IPG GP++A ++
Sbjct: 545 RMFLDQLNRNVTELKKIPGIGPKTATSLVIY 575
>gi|320537837|ref|ZP_08037755.1| Holliday junction DNA helicase RuvA [Treponema phagedenis F0421]
gi|320145314|gb|EFW37012.1| Holliday junction DNA helicase RuvA [Treponema phagedenis F0421]
Length = 203
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
IT + +E ++ L IPG G ++A++ L L
Sbjct: 93 ITAENLETALEEGDVHLLQTIPGVGKKTAQKMVLAL 128
>gi|260768875|ref|ZP_05877809.1| holliday junction DNA helicase RuvA [Vibrio furnissii CIP 102972]
gi|260616905|gb|EEX42090.1| holliday junction DNA helicase RuvA [Vibrio furnissii CIP 102972]
Length = 205
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|238919502|ref|YP_002933017.1| Holliday junction DNA helicase RuvA [Edwardsiella ictaluri 93-146]
gi|238869071|gb|ACR68782.1| holliday junction DNA helicase RuvA, putative [Edwardsiella
ictaluri 93-146]
Length = 204
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 109 VAALVKLPGVGKKTAERLV 127
>gi|189424313|ref|YP_001951490.1| Holliday junction DNA helicase RuvA [Geobacter lovleyi SZ]
gi|229560034|sp|B3E790|RUVA_GEOLS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189420572|gb|ACD94970.1| Holliday junction DNA helicase RuvA [Geobacter lovleyi SZ]
Length = 200
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
I ++ ++ L+ IPG G ++A R L L
Sbjct: 90 SNIQPPQLAAALQQGDLHKLSAIPGIGKKTAERLVLEL 127
>gi|114330310|ref|YP_746532.1| Holliday junction DNA helicase RuvA [Nitrosomonas eutropha C91]
gi|122314644|sp|Q0AJA4|RUVA_NITEC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|114307324|gb|ABI58567.1| Holliday junction DNA helicase subunit RuvA [Nitrosomonas eutropha
C91]
Length = 194
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
L +IPG G ++A R L L + K + L+EA + V
Sbjct: 110 LTKIPGIGKKTAERLLLEL-RDKIDPVAILSEA-GAAASNV 148
>gi|330975328|gb|EGH75394.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 202
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|297621995|ref|YP_003710132.1| Holliday junction ATP-dependent DNA helicase ruvA [Waddlia
chondrophila WSU 86-1044]
gi|297377296|gb|ADI39126.1| Holliday junction ATP-dependent DNA helicase ruvA [Waddlia
chondrophila WSU 86-1044]
Length = 202
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ +++++PG G ++A+R + L
Sbjct: 107 VAMISKVPGIGKKTAQRLVIEL 128
>gi|289674670|ref|ZP_06495560.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
syringae FF5]
gi|302187157|ref|ZP_07263830.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
syringae 642]
gi|330950609|gb|EGH50869.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae Cit 7]
Length = 202
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|255658187|ref|ZP_05403596.1| holliday junction DNA helicase RuvA [Mitsuokella multacida DSM
20544]
gi|260849495|gb|EEX69502.1| holliday junction DNA helicase RuvA [Mitsuokella multacida DSM
20544]
Length = 199
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L ++PG G +SA R L L
Sbjct: 109 LTKLPGIGKKSAERLILEL 127
>gi|15802274|ref|NP_288298.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7
EDL933]
gi|15831825|ref|NP_310598.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
Sakai]
gi|16129814|ref|NP_416375.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli str. K-12 substr. MG1655]
gi|26248127|ref|NP_754167.1| Holliday junction DNA helicase RuvA [Escherichia coli CFT073]
gi|82543694|ref|YP_407641.1| Holliday junction DNA helicase RuvA [Shigella boydii Sb227]
gi|89108701|ref|AP_002481.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli str. K-12 substr. W3110]
gi|91211086|ref|YP_541072.1| Holliday junction DNA helicase RuvA [Escherichia coli UTI89]
gi|110641979|ref|YP_669709.1| Holliday junction DNA helicase RuvA [Escherichia coli 536]
gi|117624013|ref|YP_852926.1| Holliday junction DNA helicase motor protein [Escherichia coli APEC
O1]
gi|157159402|ref|YP_001463164.1| Holliday junction DNA helicase RuvA [Escherichia coli E24377A]
gi|168747889|ref|ZP_02772911.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4113]
gi|168757895|ref|ZP_02782902.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4401]
gi|168762345|ref|ZP_02787352.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4501]
gi|168770844|ref|ZP_02795851.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4486]
gi|168776592|ref|ZP_02801599.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4196]
gi|168783161|ref|ZP_02808168.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4076]
gi|168788281|ref|ZP_02813288.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC869]
gi|168801903|ref|ZP_02826910.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC508]
gi|170081517|ref|YP_001730837.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli str. K-12 substr. DH10B]
gi|170683558|ref|YP_001743383.1| Holliday junction DNA helicase RuvA [Escherichia coli SMS-3-5]
gi|187730219|ref|YP_001879638.1| Holliday junction DNA helicase RuvA [Shigella boydii CDC 3083-94]
gi|191173018|ref|ZP_03034552.1| Holliday junction DNA helicase RuvA [Escherichia coli F11]
gi|193066070|ref|ZP_03047127.1| Holliday junction DNA helicase RuvA [Escherichia coli E22]
gi|194429662|ref|ZP_03062180.1| Holliday junction DNA helicase RuvA [Escherichia coli B171]
gi|195940293|ref|ZP_03085675.1| Holliday junction DNA helicase motor protein [Escherichia coli
O157:H7 str. EC4024]
gi|208810719|ref|ZP_03252595.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4206]
gi|208816922|ref|ZP_03258042.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4045]
gi|209396228|ref|YP_002270944.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4115]
gi|209919228|ref|YP_002293312.1| Holliday junction DNA helicase RuvA [Escherichia coli SE11]
gi|215487074|ref|YP_002329505.1| Holliday junction DNA helicase RuvA [Escherichia coli O127:H6 str.
E2348/69]
gi|217328695|ref|ZP_03444776.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
TW14588]
gi|218554449|ref|YP_002387362.1| Holliday junction DNA helicase RuvA [Escherichia coli IAI1]
gi|218558726|ref|YP_002391639.1| Holliday junction DNA helicase RuvA [Escherichia coli S88]
gi|218689799|ref|YP_002398011.1| Holliday junction DNA helicase RuvA [Escherichia coli ED1a]
gi|218695427|ref|YP_002403094.1| Holliday junction DNA helicase RuvA [Escherichia coli 55989]
gi|218699567|ref|YP_002407196.1| Holliday junction DNA helicase RuvA [Escherichia coli IAI39]
gi|218705362|ref|YP_002412881.1| Holliday junction DNA helicase RuvA [Escherichia coli UMN026]
gi|227885711|ref|ZP_04003516.1| Holliday junction DNA helicase motor protein [Escherichia coli
83972]
gi|237705815|ref|ZP_04536296.1| holliday junction helicase subunit B [Escherichia sp. 3_2_53FAA]
gi|238901076|ref|YP_002926872.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli BW2952]
gi|254793485|ref|YP_003078322.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
TW14359]
gi|256022473|ref|ZP_05436338.1| Holliday junction DNA helicase RuvA [Escherichia sp. 4_1_40B]
gi|260844205|ref|YP_003221983.1| component of RuvABC resolvasome, regulatory subunit RuvA
[Escherichia coli O103:H2 str. 12009]
gi|261227638|ref|ZP_05941919.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258196|ref|ZP_05950729.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
FRIK966]
gi|291283043|ref|YP_003499861.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli
O55:H7 str. CB9615]
gi|293405356|ref|ZP_06649348.1| ruvA [Escherichia coli FVEC1412]
gi|293410173|ref|ZP_06653749.1| Holliday junction DNA helicase RuvA [Escherichia coli B354]
gi|293415176|ref|ZP_06657819.1| Holliday junction DNA helicase RuvA [Escherichia coli B185]
gi|293446248|ref|ZP_06662670.1| Holliday junction DNA helicase RuvA [Escherichia coli B088]
gi|298380998|ref|ZP_06990597.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli
FVEC1302]
gi|300824197|ref|ZP_07104315.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 119-7]
gi|300899111|ref|ZP_07117394.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 198-1]
gi|300904745|ref|ZP_07122575.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 84-1]
gi|300917562|ref|ZP_07134217.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 115-1]
gi|300935836|ref|ZP_07150794.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 21-1]
gi|300982165|ref|ZP_07175900.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 200-1]
gi|300994110|ref|ZP_07180693.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 45-1]
gi|301018303|ref|ZP_07182812.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 69-1]
gi|301029311|ref|ZP_07192408.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 196-1]
gi|301050785|ref|ZP_07197642.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 185-1]
gi|301304450|ref|ZP_07210562.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 124-1]
gi|306814309|ref|ZP_07448475.1| Holliday junction DNA helicase RuvA [Escherichia coli NC101]
gi|307138524|ref|ZP_07497880.1| Holliday junction DNA helicase RuvA [Escherichia coli H736]
gi|312967063|ref|ZP_07781281.1| holliday junction DNA helicase RuvA [Escherichia coli 2362-75]
gi|331642475|ref|ZP_08343610.1| holliday junction DNA helicase RuvA [Escherichia coli H736]
gi|331647458|ref|ZP_08348550.1| holliday junction DNA helicase RuvA [Escherichia coli M605]
gi|331653270|ref|ZP_08354275.1| holliday junction DNA helicase RuvA [Escherichia coli M718]
gi|331657910|ref|ZP_08358872.1| holliday junction DNA helicase RuvA [Escherichia coli TA206]
gi|331673391|ref|ZP_08374159.1| holliday junction DNA helicase RuvA [Escherichia coli TA280]
gi|331677742|ref|ZP_08378417.1| holliday junction DNA helicase RuvA [Escherichia coli H591]
gi|331683367|ref|ZP_08383968.1| holliday junction DNA helicase RuvA [Escherichia coli H299]
gi|67472389|sp|P0A809|RUVA_ECOLI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|67472390|sp|P0A810|RUVA_ECOL6 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|67472391|sp|P0A811|RUVA_ECO57 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|90135806|sp|Q322E5|RUVA_SHIBS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123343927|sp|Q0TGX1|RUVA_ECOL5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123387921|sp|Q1RAS3|RUVA_ECOUT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230548|sp|A1AC22|RUVA_ECOK1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|167012658|sp|A7ZMY5|RUVA_ECO24 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698730|sp|B5YR06|RUVA_ECO5E RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698731|sp|B6IBU0|RUVA_ECOSE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725440|sp|B7MBS0|RUVA_ECO45 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725441|sp|B7NS57|RUVA_ECO7I RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725442|sp|B7M2F2|RUVA_ECO8A RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725443|sp|B7NBL2|RUVA_ECOLU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725444|sp|B1LD10|RUVA_ECOSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560029|sp|B1XHC9|RUVA_ECODH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560128|sp|B2TWQ2|RUVA_SHIB3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254766959|sp|B7USN8|RUVA_ECO27 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254766960|sp|B7L7R4|RUVA_ECO55 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254766961|sp|B7MVP7|RUVA_ECO81 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|259495641|sp|C4ZQE5|RUVA_ECOBW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|5107494|pdb|1BDX|A Chain A, E. Coli Dna Helicase Ruva With Bound Dna Holliday
Junction, Alpha Carbons And Phosphate Atoms Only
gi|5107495|pdb|1BDX|B Chain B, E. Coli Dna Helicase Ruva With Bound Dna Holliday
Junction, Alpha Carbons And Phosphate Atoms Only
gi|5107496|pdb|1BDX|C Chain C, E. Coli Dna Helicase Ruva With Bound Dna Holliday
Junction, Alpha Carbons And Phosphate Atoms Only
gi|5107497|pdb|1BDX|D Chain D, E. Coli Dna Helicase Ruva With Bound Dna Holliday
Junction, Alpha Carbons And Phosphate Atoms Only
gi|9955149|pdb|1C7Y|A Chain A, E.Coli Ruva-Holliday Junction Complex
gi|157831340|pdb|1HJP|A Chain A, Holliday Junction Binding Protein Ruva From E. Coli
gi|12515917|gb|AAG56851.1|AE005408_9 Holliday junction helicase subunit B; branch migration; repair
[Escherichia coli O157:H7 str. EDL933]
gi|26108530|gb|AAN80732.1|AE016761_307 Holliday junction DNA helicase ruvA [Escherichia coli CFT073]
gi|147782|gb|AAA24612.1| ruvA protein (gtg start) [Escherichia coli]
gi|1736508|dbj|BAA15672.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli str. K12 substr. W3110]
gi|1788168|gb|AAC74931.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli str. K-12 substr. MG1655]
gi|13362039|dbj|BAB35994.1| Holliday junction helicase subunit B [Escherichia coli O157:H7 str.
Sakai]
gi|81245105|gb|ABB65813.1| Holliday junction helicase subunit B [Shigella boydii Sb227]
gi|91072660|gb|ABE07541.1| RuvA protein, Holliday junction helicase subunit B [Escherichia
coli UTI89]
gi|110343571|gb|ABG69808.1| holliday junction DNA helicase RuvA [Escherichia coli 536]
gi|115513137|gb|ABJ01212.1| Holliday junction DNA helicase motor protein [Escherichia coli APEC
O1]
gi|157081432|gb|ABV21140.1| Holliday junction DNA helicase RuvA [Escherichia coli E24377A]
gi|169889352|gb|ACB03059.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli str. K-12 substr. DH10B]
gi|170521276|gb|ACB19454.1| Holliday junction DNA helicase RuvA [Escherichia coli SMS-3-5]
gi|187427211|gb|ACD06485.1| Holliday junction DNA helicase RuvA [Shigella boydii CDC 3083-94]
gi|187768087|gb|EDU31931.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4196]
gi|188017456|gb|EDU55578.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4113]
gi|188999499|gb|EDU68485.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4076]
gi|189355165|gb|EDU73584.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4401]
gi|189360288|gb|EDU78707.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4486]
gi|189367348|gb|EDU85764.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4501]
gi|189372002|gb|EDU90418.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC869]
gi|189376026|gb|EDU94442.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC508]
gi|190906729|gb|EDV66334.1| Holliday junction DNA helicase RuvA [Escherichia coli F11]
gi|192926307|gb|EDV80944.1| Holliday junction DNA helicase RuvA [Escherichia coli E22]
gi|194412304|gb|EDX28608.1| Holliday junction DNA helicase RuvA [Escherichia coli B171]
gi|195182923|dbj|BAG66491.1| Holliday junction helicase subunit B [Escherichia coli O111:H-]
gi|208725235|gb|EDZ74942.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4206]
gi|208731265|gb|EDZ79954.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4045]
gi|209157628|gb|ACI35061.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC4115]
gi|209767468|gb|ACI82046.1| Holliday junction helicase subunit B [Escherichia coli]
gi|209767470|gb|ACI82047.1| Holliday junction helicase subunit B [Escherichia coli]
gi|209767472|gb|ACI82048.1| Holliday junction helicase subunit B [Escherichia coli]
gi|209767474|gb|ACI82049.1| Holliday junction helicase subunit B [Escherichia coli]
gi|209767476|gb|ACI82050.1| Holliday junction helicase subunit B [Escherichia coli]
gi|209912487|dbj|BAG77561.1| holliday junction helicase subunit RuvA [Escherichia coli SE11]
gi|215265146|emb|CAS09534.1| RuvA component of RuvABC resolvasome, regulatory subunit
[Escherichia coli O127:H6 str. E2348/69]
gi|217318042|gb|EEC26469.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
TW14588]
gi|218352159|emb|CAU97898.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli 55989]
gi|218361217|emb|CAQ98801.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli IAI1]
gi|218365495|emb|CAR03222.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli S88]
gi|218369553|emb|CAR17322.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli IAI39]
gi|218427363|emb|CAR08163.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli ED1a]
gi|218432459|emb|CAR13352.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli UMN026]
gi|222033610|emb|CAP76351.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli
LF82]
gi|226900572|gb|EEH86831.1| holliday junction helicase subunit B [Escherichia sp. 3_2_53FAA]
gi|227837284|gb|EEJ47750.1| Holliday junction DNA helicase motor protein [Escherichia coli
83972]
gi|238860169|gb|ACR62167.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli BW2952]
gi|254592885|gb|ACT72246.1| component of RuvABC resolvasome, regulatory subunit [Escherichia
coli O157:H7 str. TW14359]
gi|257759352|dbj|BAI30849.1| component of RuvABC resolvasome, regulatory subunit RuvA
[Escherichia coli O103:H2 str. 12009]
gi|260449016|gb|ACX39438.1| Holliday junction DNA helicase RuvA [Escherichia coli DH1]
gi|281178931|dbj|BAI55261.1| holliday junction helicase subunit RuvA [Escherichia coli SE15]
gi|284921781|emb|CBG34854.1| holliday junction ATP-dependent DNA helicase [Escherichia coli 042]
gi|290762916|gb|ADD56877.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli
O55:H7 str. CB9615]
gi|291323078|gb|EFE62506.1| Holliday junction DNA helicase RuvA [Escherichia coli B088]
gi|291427564|gb|EFF00591.1| ruvA [Escherichia coli FVEC1412]
gi|291432824|gb|EFF05803.1| Holliday junction DNA helicase RuvA [Escherichia coli B185]
gi|291470641|gb|EFF13125.1| Holliday junction DNA helicase RuvA [Escherichia coli B354]
gi|294493531|gb|ADE92287.1| Holliday junction DNA helicase RuvA [Escherichia coli IHE3034]
gi|298278440|gb|EFI19954.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli
FVEC1302]
gi|299877737|gb|EFI85948.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 196-1]
gi|300297540|gb|EFJ53925.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 185-1]
gi|300307321|gb|EFJ61841.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 200-1]
gi|300357268|gb|EFJ73138.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 198-1]
gi|300399739|gb|EFJ83277.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 69-1]
gi|300403329|gb|EFJ86867.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 84-1]
gi|300406372|gb|EFJ89910.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 45-1]
gi|300415216|gb|EFJ98526.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 115-1]
gi|300458948|gb|EFK22441.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 21-1]
gi|300523268|gb|EFK44337.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 119-7]
gi|300840301|gb|EFK68061.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 124-1]
gi|305852468|gb|EFM52919.1| Holliday junction DNA helicase RuvA [Escherichia coli NC101]
gi|307553880|gb|ADN46655.1| holliday junction ATP-dependent DNA helicase RuvA [Escherichia coli
ABU 83972]
gi|307626656|gb|ADN70960.1| Holliday junction DNA helicase RuvA [Escherichia coli UM146]
gi|312288527|gb|EFR16429.1| holliday junction DNA helicase RuvA [Escherichia coli 2362-75]
gi|312946461|gb|ADR27288.1| Holliday junction DNA helicase RuvA [Escherichia coli O83:H1 str.
NRG 857C]
gi|315136504|dbj|BAJ43663.1| Holliday junction DNA resolvasome [Escherichia coli DH1]
gi|315257307|gb|EFU37275.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 85-1]
gi|315286570|gb|EFU46005.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 110-3]
gi|315290340|gb|EFU49716.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 153-1]
gi|315296552|gb|EFU55849.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 16-3]
gi|320173573|gb|EFW48768.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae CDC
74-1112]
gi|320182601|gb|EFW57490.1| Holliday junction DNA helicase RuvA [Shigella boydii ATCC 9905]
gi|320187795|gb|EFW62469.1| Holliday junction DNA helicase RuvA [Shigella flexneri CDC 796-83]
gi|320188562|gb|EFW63224.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
EC1212]
gi|320194423|gb|EFW69054.1| Holliday junction DNA helicase RuvA [Escherichia coli WV_060327]
gi|320641715|gb|EFX11103.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
G5101]
gi|320647075|gb|EFX15908.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H- str.
493-89]
gi|320652358|gb|EFX20656.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H- str.
H 2687]
gi|320657959|gb|EFX25721.1| Holliday junction DNA helicase RuvA [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320658532|gb|EFX26226.1| Holliday junction DNA helicase RuvA [Escherichia coli O55:H7 str.
USDA 5905]
gi|320668430|gb|EFX35257.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
LSU-61]
gi|323158654|gb|EFZ44668.1| holliday junction DNA helicase RuvA [Escherichia coli E128010]
gi|323174753|gb|EFZ60369.1| holliday junction DNA helicase RuvA [Escherichia coli LT-68]
gi|323186868|gb|EFZ72187.1| holliday junction DNA helicase RuvA [Escherichia coli RN587/1]
gi|323940471|gb|EGB36662.1| Holliday junction DNA helicase RuvA [Escherichia coli E482]
gi|323948253|gb|EGB44241.1| Holliday junction DNA helicase RuvA [Escherichia coli H120]
gi|323952363|gb|EGB48236.1| Holliday junction DNA helicase RuvA [Escherichia coli H252]
gi|323956492|gb|EGB52234.1| Holliday junction DNA helicase RuvA [Escherichia coli H263]
gi|323968281|gb|EGB63688.1| Holliday junction DNA helicase RuvA [Escherichia coli M863]
gi|323977955|gb|EGB73041.1| Holliday junction DNA helicase RuvA [Escherichia coli TW10509]
gi|324007232|gb|EGB76451.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 57-2]
gi|324012870|gb|EGB82089.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 60-1]
gi|324018004|gb|EGB87223.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 117-3]
gi|325496996|gb|EGC94855.1| Holliday junction DNA helicase RuvA [Escherichia fergusonii ECD227]
gi|326342241|gb|EGD66022.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
1044]
gi|326343791|gb|EGD67553.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str.
1125]
gi|327252987|gb|EGE64641.1| holliday junction DNA helicase RuvA [Escherichia coli STEC_7v]
gi|330911671|gb|EGH40181.1| holliday junction DNA helicase RuvA [Escherichia coli AA86]
gi|331039273|gb|EGI11493.1| holliday junction DNA helicase RuvA [Escherichia coli H736]
gi|331043182|gb|EGI15320.1| holliday junction DNA helicase RuvA [Escherichia coli M605]
gi|331049368|gb|EGI21440.1| holliday junction DNA helicase RuvA [Escherichia coli M718]
gi|331056158|gb|EGI28167.1| holliday junction DNA helicase RuvA [Escherichia coli TA206]
gi|331069589|gb|EGI40976.1| holliday junction DNA helicase RuvA [Escherichia coli TA280]
gi|331074202|gb|EGI45522.1| holliday junction DNA helicase RuvA [Escherichia coli H591]
gi|331079582|gb|EGI50779.1| holliday junction DNA helicase RuvA [Escherichia coli H299]
gi|332090038|gb|EGI95138.1| holliday junction DNA helicase RuvA [Shigella boydii 5216-82]
gi|332096672|gb|EGJ01663.1| holliday junction DNA helicase RuvA [Shigella boydii 3594-74]
gi|332343587|gb|AEE56921.1| holliday junction DNA helicase RuvA [Escherichia coli UMNK88]
gi|333003565|gb|EGK23105.1| holliday junction DNA helicase RuvA [Shigella flexneri VA-6]
gi|333004714|gb|EGK24237.1| holliday junction DNA helicase RuvA [Shigella flexneri K-272]
gi|333018434|gb|EGK37732.1| holliday junction DNA helicase RuvA [Shigella flexneri K-227]
Length = 203
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|262171190|ref|ZP_06038868.1| holliday junction DNA helicase RuvA [Vibrio mimicus MB-451]
gi|261892266|gb|EEY38252.1| holliday junction DNA helicase RuvA [Vibrio mimicus MB-451]
Length = 204
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|261211909|ref|ZP_05926196.1| holliday junction DNA helicase RuvA [Vibrio sp. RC341]
gi|260839259|gb|EEX65891.1| holliday junction DNA helicase RuvA [Vibrio sp. RC341]
Length = 204
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|254292161|ref|ZP_04962932.1| Holliday junction DNA helicase RuvA [Vibrio cholerae AM-19226]
gi|150421924|gb|EDN13900.1| Holliday junction DNA helicase RuvA [Vibrio cholerae AM-19226]
Length = 204
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|56751811|ref|YP_172512.1| Holliday junction DNA helicase RuvA [Synechococcus elongatus PCC
6301]
gi|81301107|ref|YP_401315.1| Holliday junction DNA helicase RuvA [Synechococcus elongatus PCC
7942]
gi|81561725|sp|Q5N128|RUVA_SYNP6 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123769196|sp|Q31KU1|RUVA_SYNE7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|56686770|dbj|BAD79992.1| holliday junction DNA helicase RuvA [Synechococcus elongatus PCC
6301]
gi|81169988|gb|ABB58328.1| Holliday junction DNA helicase subunit RuvA [Synechococcus
elongatus PCC 7942]
Length = 207
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 15 KILARIPGFGPRSARRATLH----LVKKKEQLLG---PLAEAMANIYNKV 57
++L+R PG G ++A R L L + +E+ A +A + V
Sbjct: 112 RLLSRTPGVGAKTAERLALELRSKLAEWREEAGLLPSATAAPIAAVQEDV 161
>gi|304312895|ref|YP_003812493.1| Holliday junction resolvasome DNA-binding subunit [gamma
proteobacterium HdN1]
gi|301798628|emb|CBL46860.1| Holliday junction resolvasome DNA-binding subunit [gamma
proteobacterium HdN1]
Length = 208
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
+ L RIPG G ++A R +V+ +++L L ++ + +
Sbjct: 107 VSALIRIPGVGKKTAERL---IVEMQDRLPRTLETSLTALQEE 146
>gi|229597664|pdb|2ZTC|A Chain A, Mtruva Form Ii
gi|229597665|pdb|2ZTC|B Chain B, Mtruva Form Ii
gi|229597666|pdb|2ZTC|C Chain C, Mtruva Form Ii
gi|229597667|pdb|2ZTC|D Chain D, Mtruva Form Ii
gi|229597668|pdb|2ZTD|A Chain A, Mtruva Form Iii
gi|229597669|pdb|2ZTD|B Chain B, Mtruva Form Iii
gi|229597670|pdb|2ZTE|A Chain A, Mtruva Form Iv
Length = 212
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
+ L R+PG G R A R L L + + + A++ + V
Sbjct: 122 VAALTRVPGIGKRGAERMVLEL--RDKVGVAATGGALSTNGHAVR 164
>gi|194439064|ref|ZP_03071147.1| Holliday junction DNA helicase RuvA [Escherichia coli 101-1]
gi|253773182|ref|YP_003036013.1| Holliday junction DNA helicase RuvA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161921|ref|YP_003045029.1| Holliday junction DNA helicase RuvA [Escherichia coli B str.
REL606]
gi|300928892|ref|ZP_07144397.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 187-1]
gi|194422023|gb|EDX38027.1| Holliday junction DNA helicase RuvA [Escherichia coli 101-1]
gi|242377582|emb|CAQ32337.1| branch migration of Holliday structures; repair, subunit of
resolvasome [Escherichia coli BL21(DE3)]
gi|253324226|gb|ACT28828.1| Holliday junction DNA helicase RuvA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973822|gb|ACT39493.1| Holliday junction DNA helicase motor protein [Escherichia coli B
str. REL606]
gi|253978016|gb|ACT43686.1| Holliday junction DNA helicase motor protein [Escherichia coli
BL21(DE3)]
gi|300463120|gb|EFK26613.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 187-1]
gi|323961916|gb|EGB57515.1| Holliday junction DNA helicase RuvA [Escherichia coli H489]
gi|323972631|gb|EGB67834.1| Holliday junction DNA helicase RuvA [Escherichia coli TA007]
Length = 203
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|74311809|ref|YP_310228.1| Holliday junction DNA helicase RuvA [Shigella sonnei Ss046]
gi|90135833|sp|Q3Z2L9|RUVA_SHISS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|73855286|gb|AAZ87993.1| Holliday junction helicase subunit B [Shigella sonnei Ss046]
Length = 203
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|157830735|pdb|1CUK|A Chain A, Escherichia Coli Ruva Protein At Ph 4.9 And Room
Temperature
gi|581226|emb|CAA30119.1| unnamed protein product [Escherichia coli]
Length = 203
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130
>gi|331016439|gb|EGH96495.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|293603639|ref|ZP_06686060.1| crossover junction ATP-dependent DNA helicase RuvA [Achromobacter
piechaudii ATCC 43553]
gi|292818075|gb|EFF77135.1| crossover junction ATP-dependent DNA helicase RuvA [Achromobacter
piechaudii ATCC 43553]
Length = 190
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
L R+PG G ++A R L++ + +L + A
Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGAA 139
>gi|258621408|ref|ZP_05716442.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM573]
gi|258626836|ref|ZP_05721643.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM603]
gi|262165955|ref|ZP_06033692.1| holliday junction DNA helicase RuvA [Vibrio mimicus VM223]
gi|258580883|gb|EEW05825.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM603]
gi|258586796|gb|EEW11511.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM573]
gi|262025671|gb|EEY44339.1| holliday junction DNA helicase RuvA [Vibrio mimicus VM223]
Length = 204
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|163742241|ref|ZP_02149629.1| Holliday junction DNA helicase motor protein [Phaeobacter
gallaeciensis 2.10]
gi|161384571|gb|EDQ08952.1| Holliday junction DNA helicase motor protein [Phaeobacter
gallaeciensis 2.10]
Length = 229
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
G GP++A+R L L K K + + +A+ +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGTIADAMDGPG 150
>gi|66044657|ref|YP_234498.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
syringae B728a]
gi|75502953|sp|Q4ZWL2|RUVA_PSEU2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|63255364|gb|AAY36460.1| DNA recombination protein, RuvA [Pseudomonas syringae pv. syringae
B728a]
gi|330968891|gb|EGH68957.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|330959265|gb|EGH59525.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|192360858|ref|YP_001981526.1| Holliday junction DNA helicase RuvA [Cellvibrio japonicus Ueda107]
gi|229560014|sp|B3PB58|RUVA_CELJU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|190687023|gb|ACE84701.1| Holliday junction DNA helicase RuvA [Cellvibrio japonicus Ueda107]
Length = 205
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK L R+PG G ++A R + L
Sbjct: 107 IKALTRVPGIGQKTAERLVIEL 128
>gi|71734074|ref|YP_275913.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|90135568|sp|Q48FC4|RUVA_PSE14 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|71554627|gb|AAZ33838.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323052|gb|EFW79141.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329676|gb|EFW85665.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330877979|gb|EGH12128.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330892240|gb|EGH24901.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. mori
str. 301020]
gi|330988969|gb|EGH87072.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|242065370|ref|XP_002453974.1| hypothetical protein SORBIDRAFT_04g022540 [Sorghum bicolor]
gi|241933805|gb|EES06950.1| hypothetical protein SORBIDRAFT_04g022540 [Sorghum bicolor]
Length = 413
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKK 39
KE+ +I+ L +PG GP+ A L + +
Sbjct: 293 KELSYVIEALCTLPGVGPKVAACIALFSLDQN 324
>gi|163738342|ref|ZP_02145757.1| Holliday junction DNA helicase motor protein [Phaeobacter
gallaeciensis BS107]
gi|161388263|gb|EDQ12617.1| Holliday junction DNA helicase motor protein [Phaeobacter
gallaeciensis BS107]
Length = 229
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
G GP++A+R L L K K + + +A+ +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGTIADAMDGPG 150
>gi|260905223|ref|ZP_05913545.1| hypothetical protein BlinB_07815 [Brevibacterium linens BL2]
Length = 275
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 53 IYNKVCLCSICGNVDTT---DPCAICIDQQ 79
V +C CG TT D C IC D++
Sbjct: 3 ALTNVTICRTCGVETTTPPPDVCPICSDER 32
>gi|28871123|ref|NP_793742.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213969185|ref|ZP_03397324.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato T1]
gi|301384820|ref|ZP_07233238.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato Max13]
gi|302063526|ref|ZP_07255067.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato K40]
gi|302130610|ref|ZP_07256600.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|37999572|sp|Q87Y34|RUVA_PSESM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|28854373|gb|AAO57437.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213926183|gb|EEB59739.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tomato T1]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|320539865|ref|ZP_08039524.1| component of RuvABC resolvasome, regulatory subunit [Serratia
symbiotica str. Tucson]
gi|320030051|gb|EFW12071.1| component of RuvABC resolvasome, regulatory subunit [Serratia
symbiotica str. Tucson]
Length = 204
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
Query: 8 KEIENLIKILARIPGFGPRSARRAT 32
+EI LI ++PG G ++A R
Sbjct: 105 EEITTLI----KLPGVGKKTAERLV 125
>gi|298488209|ref|ZP_07006245.1| Holliday junction DNA helicase RuvA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157267|gb|EFH98351.1| Holliday junction DNA helicase RuvA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDASALTRIPGVGKKTAERL 124
>gi|289626496|ref|ZP_06459450.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650942|ref|ZP_06482285.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330868612|gb|EGH03321.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|268679680|ref|YP_003304111.1| Holliday junction DNA helicase RuvA [Sulfurospirillum deleyianum
DSM 6946]
gi|268617711|gb|ACZ12076.1| Holliday junction DNA helicase RuvA [Sulfurospirillum deleyianum
DSM 6946]
Length = 186
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 14 IKILARIPGFGPRSARRA 31
I ++PG GP+SA+R
Sbjct: 107 ISAFQKVPGIGPKSAKRI 124
>gi|257487010|ref|ZP_05641051.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331009348|gb|EGH89404.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|330872653|gb|EGH06802.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|237800218|ref|ZP_04588679.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023075|gb|EGI03132.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 202
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|225568715|ref|ZP_03777740.1| hypothetical protein CLOHYLEM_04794 [Clostridium hylemonae DSM
15053]
gi|225162214|gb|EEG74833.1| hypothetical protein CLOHYLEM_04794 [Clostridium hylemonae DSM
15053]
Length = 692
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 85 IIVVEDVADLWALERSKAVNA-LYHVLGGS------------LSPLDRIGPEDIGIQSLI 131
+++VE A + + K Y V + + P + P+ I I+
Sbjct: 5 LVIVESPAKVKTI---KKFLGSNYAVTASNGHVRDLPKSQLGVDPENDYEPKYITIRGKG 61
Query: 132 E-----RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
E R EVKK ++ A EG+ + ++ LK + K+ R+++
Sbjct: 62 EILANLRKEVKKADKIYLATDPDREGEAISWHLKQALKLENKKVYRISF 110
>gi|127513004|ref|YP_001094201.1| Holliday junction DNA helicase RuvA [Shewanella loihica PV-4]
gi|166200262|sp|A3QEP4|RUVA_SHELP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|126638299|gb|ABO23942.1| Holliday junction DNA helicase RuvA [Shewanella loihica PV-4]
Length = 205
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|301060127|ref|ZP_07200994.1| Holliday junction DNA helicase RuvA [delta proteobacterium NaphS2]
gi|300445639|gb|EFK09537.1| Holliday junction DNA helicase RuvA [delta proteobacterium NaphS2]
Length = 200
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ +E+ I L IPG G ++A R L L
Sbjct: 93 MGAEELLRAIAAGDAPRLQAIPGIGRKTAERIALEL 128
>gi|328544243|ref|YP_004304352.1| DNA polymerase [polymorphum gilvum SL003B-26A1]
gi|326413985|gb|ADZ71048.1| DNA polymerase domain protein [Polymorphum gilvum SL003B-26A1]
Length = 303
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 13/51 (25%)
Query: 9 EIENLIKILA------RIPGFGPRSARRAT--LHLVKKKEQLLGPLAEAMA 51
++E L L+ IPG GP+ A R LHL + L L A+
Sbjct: 105 QLERLSGELSPEKLFQTIPGIGPKLAERLAGELHL-----ETLEDLEAALH 150
>gi|149191831|ref|ZP_01870068.1| Holliday junction DNA helicase motor protein [Vibrio shilonii AK1]
gi|148834349|gb|EDL51349.1| Holliday junction DNA helicase motor protein [Vibrio shilonii AK1]
Length = 205
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLVKLPGVGKKTAERLV 125
>gi|312621877|ref|YP_004023490.1| Radical SAM domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202344|gb|ADQ45671.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 415
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SARR H + + L + +
Sbjct: 320 EQLIRVPGIGIKSARRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361
>gi|307826389|ref|ZP_07656591.1| Holliday junction DNA helicase RuvA [Methylobacter tundripaludum
SV96]
gi|307732566|gb|EFO03441.1| Holliday junction DNA helicase RuvA [Methylobacter tundripaludum
SV96]
Length = 203
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPL 46
+ L R+PG G ++A R + + + L
Sbjct: 108 QALVRLPGVGKKTAERLVIEMRDRLPDLTDSF 139
>gi|153810824|ref|ZP_01963492.1| hypothetical protein RUMOBE_01208 [Ruminococcus obeum ATCC 29174]
gi|149833220|gb|EDM88302.1| hypothetical protein RUMOBE_01208 [Ruminococcus obeum ATCC 29174]
Length = 203
Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAE 48
IK +++ PG G ++A++ L L +K ++ LA
Sbjct: 107 IKTISKAPGIGKKTAQKLILELKDKLKLEDAFEKKLAH 144
>gi|326622940|gb|EGE29285.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 187
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 77 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 114
>gi|307244215|ref|ZP_07526330.1| Holliday junction DNA helicase RuvA [Peptostreptococcus stomatis
DSM 17678]
gi|306492365|gb|EFM64403.1| Holliday junction DNA helicase RuvA [Peptostreptococcus stomatis
DSM 17678]
Length = 203
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L++ PG G ++A R L L
Sbjct: 109 LSKAPGVGKKTAERMVLEL 127
>gi|330964824|gb|EGH65084.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 202
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124
>gi|262404190|ref|ZP_06080745.1| holliday junction DNA helicase RuvA [Vibrio sp. RC586]
gi|262349222|gb|EEY98360.1| holliday junction DNA helicase RuvA [Vibrio sp. RC586]
Length = 204
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ISTLIKLPGVGKKTAERLV 125
>gi|213163229|ref|ZP_03348939.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
Length = 174
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 64 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 101
>gi|56477680|ref|YP_159269.1| Holliday junction DNA helicase RuvA [Aromatoleum aromaticum EbN1]
gi|81357290|sp|Q5P2U6|RUVA_AZOSE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|56313723|emb|CAI08368.1| Holliday junction DNA helicase [Aromatoleum aromaticum EbN1]
Length = 199
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46
L +IPG G ++A R L++ +++L L
Sbjct: 110 LVKIPGIGKKTAERL---LLELRDKLGRAL 136
>gi|319941758|ref|ZP_08016080.1| Holliday junction DNA helicase RuvA [Sutterella wadsworthensis
3_1_45B]
gi|319804691|gb|EFW01558.1| Holliday junction DNA helicase RuvA [Sutterella wadsworthensis
3_1_45B]
Length = 193
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 16 ILARIPGFGPRSARRATLHL 35
+L ++PG G ++A R L L
Sbjct: 109 LLTKVPGIGKKTAERLVLEL 128
>gi|317121767|ref|YP_004101770.1| ATP-dependent DNA helicase RecG [Thermaerobacter marianensis DSM
12885]
gi|315591747|gb|ADU51043.1| ATP-dependent DNA helicase RecG [Thermaerobacter marianensis DSM
12885]
Length = 924
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 17 LARIPGFGPRSARRAT 32
L+R+PG G R A+R
Sbjct: 235 LSRLPGVGRRQAQRLA 250
>gi|157962184|ref|YP_001502218.1| Holliday junction DNA helicase RuvA [Shewanella pealeana ATCC
700345]
gi|189045771|sp|A8H546|RUVA_SHEPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|157847184|gb|ABV87683.1| Holliday junction DNA helicase RuvA [Shewanella pealeana ATCC
700345]
Length = 205
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|119025560|ref|YP_909405.1| primosome assembly protein PriA [Bifidobacterium adolescentis ATCC
15703]
gi|118765144|dbj|BAF39323.1| probable primosomal protein N' [Bifidobacterium adolescentis ATCC
15703]
Length = 743
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 34/130 (26%)
Query: 15 KILARI--PGFGPR---SARRA---TLH----LVKKKEQLL-GPLAEA------------ 49
LAR+ P G R +A R L L+ + + L+ +
Sbjct: 396 DELARLADPTIGARVPHTAVRILSKALETGPVLLSIPQDGITEALSCSKCHRQVRCARCT 455
Query: 50 --MANIYNKVCLCSICGNVDTTDPCAICIDQQ-RDASVIIVVEDVADLWALERSKAVNAL 106
+ + + C CG C C +++ R VV A A+E ++ +
Sbjct: 456 GPLERLADGTIRCRWCGAATVQWSCPTCHNERMR------VVRVGAAGTAMELARLFRGV 509
Query: 107 YHVLGGSLSP 116
VL P
Sbjct: 510 PMVLSTPSQP 519
>gi|312135650|ref|YP_004002988.1| Radical SAM domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775701|gb|ADQ05188.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
Length = 415
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SARR H + + L + +
Sbjct: 320 EELIRVPGVGIKSARRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361
>gi|295109923|emb|CBL23876.1| Holliday junction DNA helicase subunit RuvA [Ruminococcus obeum
A2-162]
Length = 203
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAE 48
IK ++R PG G ++A++ L L +K ++ LA
Sbjct: 107 IKTISRAPGIGKKTAQKLILELKDKLKLEDAFEKKLAH 144
>gi|296270037|ref|YP_003652669.1| Holliday junction DNA helicase RuvA [Thermobispora bispora DSM
43833]
gi|296092824|gb|ADG88776.1| Holliday junction DNA helicase RuvA [Thermobispora bispora DSM
43833]
Length = 206
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L +PG GP+SA+R L L
Sbjct: 106 VKALTMVPGIGPKSAQRIMLEL 127
>gi|237654483|ref|YP_002890797.1| Holliday junction DNA helicase RuvA [Thauera sp. MZ1T]
gi|237625730|gb|ACR02420.1| Holliday junction DNA helicase RuvA [Thauera sp. MZ1T]
Length = 200
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46
L +IPG G ++A R L++ +++L L
Sbjct: 110 LVKIPGIGKKTAERL---LLELRDKLGKAL 136
>gi|154487017|ref|ZP_02028424.1| hypothetical protein BIFADO_00855 [Bifidobacterium adolescentis
L2-32]
gi|154084880|gb|EDN83925.1| hypothetical protein BIFADO_00855 [Bifidobacterium adolescentis
L2-32]
Length = 743
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 34/130 (26%)
Query: 15 KILARI--PGFGPR---SARRA---TLH----LVKKKEQLL-GPLAEA------------ 49
LAR+ P G R +A R L L+ + + L+ +
Sbjct: 396 DELARLADPTIGARVPHTAVRILSKALETGPVLLSIPQDGITEALSCSKCHRQVRCARCT 455
Query: 50 --MANIYNKVCLCSICGNVDTTDPCAICIDQQ-RDASVIIVVEDVADLWALERSKAVNAL 106
+ + + C CG C C +++ R VV A A+E ++ +
Sbjct: 456 GPLERLADGTIRCRWCGAATVQWSCPTCHNERMR------VVRVGAAGTAMELARLFRGV 509
Query: 107 YHVLGGSLSP 116
VL P
Sbjct: 510 PMVLSTPSQP 519
>gi|297616928|ref|YP_003702087.1| Holliday junction DNA helicase RuvA [Syntrophothermus lipocalidus
DSM 12680]
gi|297144765|gb|ADI01522.1| Holliday junction DNA helicase RuvA [Syntrophothermus lipocalidus
DSM 12680]
Length = 201
Score = 37.3 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
+T +E+ + K L +PG G ++A+R L
Sbjct: 91 SSMTTEELYRAVLAQDEKSLTSVPGIGRKTAQRLIFEL 128
>gi|296101800|ref|YP_003611946.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056259|gb|ADF60997.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 204
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 130
>gi|213649641|ref|ZP_03379694.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
Length = 203
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|11498919|ref|NP_070150.1| hypothetical protein AF1321 [Archaeoglobus fulgidus DSM 4304]
gi|2649255|gb|AAB89924.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 287
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNK---VCLCSICGNVDTTDPCAICIDQQR 80
+ ++K + + + C ICG V + D CA C ++R
Sbjct: 233 IVYDIERRKPGFVKNFVRGLVRPAEEFEETKYCKICGEVSSGDVCAFCRLRER 285
>gi|327458866|gb|EGF05214.1| DNA helicase RecG [Streptococcus sanguinis SK1057]
Length = 671
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQSLTVLPGVGPKSAEKFA 22
>gi|165918186|ref|ZP_02218272.1| DNA topoisomerase I [Coxiella burnetii RSA 334]
gi|165918046|gb|EDR36650.1| DNA topoisomerase I [Coxiella burnetii RSA 334]
Length = 765
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 25/111 (22%)
Query: 85 IIVVEDVADLWALERSKAVNAL-------Y-HVLG-----GSLSPLDRIGPEDIGIQSLI 131
++VVE A +E+ Y HV G++ P D I+ I
Sbjct: 5 LVVVESPAKAKTIEK---YLGKDFKVMASYGHVRDLIPKEGAVDPEDHFKMHYQAIERNI 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGID----VKITRL 173
++ K L A EG+ A ++ L+ + K +R+
Sbjct: 62 RHMDAIAKALKPCHNLYLATDPDREGEAIAWHVKQMLESRNGLKDKKFSRV 112
>gi|153206875|ref|ZP_01945693.1| DNA topoisomerase I [Coxiella burnetii 'MSU Goat Q177']
gi|154707151|ref|YP_001425405.1| DNA topoisomerase I [Coxiella burnetii Dugway 5J108-111]
gi|212219507|ref|YP_002306294.1| DNA topoisomerase I [Coxiella burnetii CbuK_Q154]
gi|120576948|gb|EAX33572.1| DNA topoisomerase I [Coxiella burnetii 'MSU Goat Q177']
gi|154356437|gb|ABS77899.1| DNA topoisomerase I [Coxiella burnetii Dugway 5J108-111]
gi|212013769|gb|ACJ21149.1| DNA topoisomerase I [Coxiella burnetii CbuK_Q154]
Length = 765
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 25/111 (22%)
Query: 85 IIVVEDVADLWALERSKAVNAL-------Y-HVLG-----GSLSPLDRIGPEDIGIQSLI 131
++VVE A +E+ Y HV G++ P D I+ I
Sbjct: 5 LVVVESPAKAKTIEK---YLGKDFKVMASYGHVRDLIPKEGAVDPEDHFKMHYQAIERNI 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGID----VKITRL 173
++ K L A EG+ A ++ L+ + K +R+
Sbjct: 62 RHMDAIAKALKPCHNLYLATDPDREGEAIAWHVKQMLESRNGLKDKKFSRV 112
>gi|326799497|ref|YP_004317316.1| Holliday junction ATP-dependent DNA helicase ruvA [Sphingobacterium
sp. 21]
gi|326550261|gb|ADZ78646.1| Holliday junction ATP-dependent DNA helicase ruvA [Sphingobacterium
sp. 21]
Length = 194
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKK-KEQLLGPLA 47
IT EI+ I K + RI G GP+SA+R L L K K++ L
Sbjct: 90 SSITPTEIQTAIVQGDVKQIQRIKGIGPKSAQRIILELQDKLKKEGADTLI 140
>gi|158316901|ref|YP_001509409.1| DNA recombination protein RuvA [Frankia sp. EAN1pec]
gi|158112306|gb|ABW14503.1| DNA recombination protein RuvA domain I [Frankia sp. EAN1pec]
Length = 239
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 17 LARIPGFGPRSARRATLHL 35
L ++PG G +SA+R L L
Sbjct: 109 LTKVPGIGRKSAQRIVLDL 127
>gi|15609730|ref|NP_217109.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
H37Rv]
gi|15842133|ref|NP_337170.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
CDC1551]
gi|31793777|ref|NP_856270.1| Holliday junction DNA helicase RuvA [Mycobacterium bovis AF2122/97]
gi|121638478|ref|YP_978702.1| Holliday junction DNA helicase RuvA [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662432|ref|YP_001283955.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
H37Ra]
gi|148823788|ref|YP_001288542.1| Holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis F11]
gi|167967067|ref|ZP_02549344.1| Holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis H37Ra]
gi|215404543|ref|ZP_03416724.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
02_1987]
gi|215412369|ref|ZP_03421129.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
94_M4241A]
gi|215431548|ref|ZP_03429467.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
EAS054]
gi|215446844|ref|ZP_03433596.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
T85]
gi|218754331|ref|ZP_03533127.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis GM
1503]
gi|219558597|ref|ZP_03537673.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
T17]
gi|224990972|ref|YP_002645659.1| Holliday junction DNA helicase motor protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253798325|ref|YP_003031326.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN
1435]
gi|254232711|ref|ZP_04926038.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis C]
gi|254365262|ref|ZP_04981307.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
str. Haarlem]
gi|254551644|ref|ZP_05142091.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260187606|ref|ZP_05765080.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
CPHL_A]
gi|260201721|ref|ZP_05769212.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
T46]
gi|260205915|ref|ZP_05773406.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
K85]
gi|289444132|ref|ZP_06433876.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
T46]
gi|289448243|ref|ZP_06437987.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
CPHL_A]
gi|289553618|ref|ZP_06442828.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN
605]
gi|289570764|ref|ZP_06450991.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
T17]
gi|289575303|ref|ZP_06455530.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
K85]
gi|289746386|ref|ZP_06505764.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
02_1987]
gi|289754712|ref|ZP_06514090.1| holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis EAS054]
gi|289758724|ref|ZP_06518102.1| holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis T85]
gi|289762766|ref|ZP_06522144.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis GM
1503]
gi|294994298|ref|ZP_06799989.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
210]
gi|297635203|ref|ZP_06952983.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis KZN
4207]
gi|297732196|ref|ZP_06961314.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis KZN
R506]
gi|298526068|ref|ZP_07013477.1| holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
94_M4241A]
gi|306776867|ref|ZP_07415204.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu001]
gi|306780631|ref|ZP_07418968.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu002]
gi|306785395|ref|ZP_07423717.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu003]
gi|306789995|ref|ZP_07428317.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu004]
gi|306794076|ref|ZP_07432378.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu005]
gi|306798490|ref|ZP_07436792.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu006]
gi|306804353|ref|ZP_07441021.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu008]
gi|306807607|ref|ZP_07444275.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu007]
gi|306969809|ref|ZP_07482470.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu009]
gi|306972982|ref|ZP_07485643.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu010]
gi|307080692|ref|ZP_07489862.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu011]
gi|307085281|ref|ZP_07494394.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu012]
gi|313659531|ref|ZP_07816411.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis KZN
V2475]
gi|54039572|sp|P66745|RUVA_MYCBO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|54042201|sp|P66744|RUVA_MYCTU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230567|sp|A1KLU1|RUVA_MYCBP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230571|sp|A5U5U3|RUVA_MYCTA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254767377|sp|C1AF62|RUVA_MYCBT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|114794219|pdb|2H5X|A Chain A, Ruva From Mycobacterium Tuberculosis
gi|114794220|pdb|2H5X|B Chain B, Ruva From Mycobacterium Tuberculosis
gi|114794221|pdb|2H5X|C Chain C, Ruva From Mycobacterium Tuberculosis
gi|114794222|pdb|2H5X|D Chain D, Ruva From Mycobacterium Tuberculosis
gi|1478219|emb|CAB01282.1| PROBABLE HOLLIDAY JUNCTION DNA HELICASE RUVA [Mycobacterium
tuberculosis H37Rv]
gi|13882417|gb|AAK46984.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
CDC1551]
gi|31619371|emb|CAD94809.1| PROBABLE HOLLIDAY JUNCTION DNA HELICASE RUVA [Mycobacterium bovis
AF2122/97]
gi|121494126|emb|CAL72604.1| Probable holliday junction DNA helicase ruvA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124601770|gb|EAY60780.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis C]
gi|134150775|gb|EBA42820.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
str. Haarlem]
gi|148506584|gb|ABQ74393.1| Holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis H37Ra]
gi|148722315|gb|ABR06940.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
F11]
gi|224774085|dbj|BAH26891.1| Holliday junction DNA helicase motor protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319828|gb|ACT24431.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN
1435]
gi|289417051|gb|EFD14291.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
T46]
gi|289421201|gb|EFD18402.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
CPHL_A]
gi|289438250|gb|EFD20743.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN
605]
gi|289539734|gb|EFD44312.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
K85]
gi|289544518|gb|EFD48166.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
T17]
gi|289686914|gb|EFD54402.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
02_1987]
gi|289695299|gb|EFD62728.1| holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis EAS054]
gi|289710272|gb|EFD74288.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis GM
1503]
gi|289714288|gb|EFD78300.1| holliday junction DNA helicase motor protein [Mycobacterium
tuberculosis T85]
gi|298495862|gb|EFI31156.1| holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
94_M4241A]
gi|308214722|gb|EFO74121.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu001]
gi|308326462|gb|EFP15313.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu002]
gi|308329914|gb|EFP18765.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu003]
gi|308333529|gb|EFP22380.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu004]
gi|308337556|gb|EFP26407.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu005]
gi|308341223|gb|EFP30074.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu006]
gi|308346003|gb|EFP34854.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu007]
gi|308349030|gb|EFP37881.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu008]
gi|308352726|gb|EFP41577.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu009]
gi|308357598|gb|EFP46449.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu010]
gi|308361540|gb|EFP50391.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu011]
gi|308365151|gb|EFP54002.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
SUMu012]
gi|323718789|gb|EGB27946.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
CDC1551A]
gi|326904206|gb|EGE51139.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
W-148]
gi|328458095|gb|AEB03518.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN
4207]
Length = 196
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
+ L R+PG G R A R L L + + + A++ + V
Sbjct: 106 VAALTRVPGIGKRGAERMVLEL--RDKVGVAATGGALSTNGHAVR 148
>gi|283785600|ref|YP_003365465.1| holliday junction ATP-dependent DNA helicase [Citrobacter rodentium
ICC168]
gi|282949054|emb|CBG88657.1| holliday junction ATP-dependent DNA helicase [Citrobacter rodentium
ICC168]
Length = 203
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 130
>gi|212635161|ref|YP_002311686.1| Holliday junction DNA helicase RuvA [Shewanella piezotolerans WP3]
gi|226725447|sp|B8CNY0|RUVA_SHEPW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|212556645|gb|ACJ29099.1| DNA recombination protein, RuvA [Shewanella piezotolerans WP3]
Length = 205
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|167623851|ref|YP_001674145.1| Holliday junction DNA helicase RuvA [Shewanella halifaxensis
HAW-EB4]
gi|189045770|sp|B0TSA6|RUVA_SHEHH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|167353873|gb|ABZ76486.1| Holliday junction DNA helicase RuvA [Shewanella halifaxensis
HAW-EB4]
Length = 205
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|86608038|ref|YP_476800.1| Holliday junction DNA helicase RuvA [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123738043|sp|Q2JNW8|RUVA_SYNJB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|86556580|gb|ABD01537.1| Holliday junction DNA helicase RuvA [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 204
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+++L+ PG G ++A+R L L
Sbjct: 110 VRLLSLTPGVGHKTAQRLALEL 131
>gi|331091325|ref|ZP_08340165.1| DNA topoisomerase I [Lachnospiraceae bacterium 2_1_46FAA]
gi|330404486|gb|EGG84030.1| DNA topoisomerase I [Lachnospiraceae bacterium 2_1_46FAA]
Length = 688
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 21/109 (19%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVLGGS-------------LSPLDRIGPEDIGIQSLI 131
+++VE A + + K +V+ S + + P+ I I+
Sbjct: 5 LVIVESPAKVKTI---KKFLGSSYVVMASNGHVRDFPKSQFGIDVENDFEPKYITIRGKG 61
Query: 132 E-----RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
E R EVKK ++ A EG+ A ++ LK K+ R+++
Sbjct: 62 EILANLRKEVKKADKVYLATDPDREGEAIAWHLYVALKLEGKKVYRISF 110
>gi|212213459|ref|YP_002304395.1| DNA topoisomerase I [Coxiella burnetii CbuG_Q212]
gi|212011869|gb|ACJ19250.1| DNA topoisomerase I [Coxiella burnetii CbuG_Q212]
Length = 765
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 25/111 (22%)
Query: 85 IIVVEDVADLWALERSKAVNAL-------Y-HVLG-----GSLSPLDRIGPEDIGIQSLI 131
++VVE A +E+ Y HV G++ P D I+ I
Sbjct: 5 LVVVESPAKAKTIEK---YLGKDFKVMASYGHVRDLIPKEGAVDPEDHFKMHYQAIERNI 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGID----VKITRL 173
++ K L A EG+ A ++ L+ + K +R+
Sbjct: 62 RHMDAIAKALKPCHNLYLATDPDREGEAIAWHVKQMLESRNGLKDKKFSRV 112
>gi|29655283|ref|NP_820975.1| DNA topoisomerase I [Coxiella burnetii RSA 493]
gi|29542555|gb|AAO91489.1| DNA topoisomerase I [Coxiella burnetii RSA 493]
Length = 765
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 25/111 (22%)
Query: 85 IIVVEDVADLWALERSKAVNAL-------Y-HVLG-----GSLSPLDRIGPEDIGIQSLI 131
++VVE A +E+ Y HV G++ P D I+ I
Sbjct: 5 LVVVESPAKAKTIEK---YLGKDFKVMASYGHVRDLIPKEGAVDPEDHFKMHYQAIERNI 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGID----VKITRL 173
++ K L A EG+ A ++ L+ + K +R+
Sbjct: 62 RHMDAIAKALKPCHNLYLATDPDREGEAIAWHVKQMLESRNGLKDKKFSRV 112
>gi|161830529|ref|YP_001595977.1| DNA topoisomerase I [Coxiella burnetii RSA 331]
gi|161762396|gb|ABX78038.1| DNA topoisomerase I [Coxiella burnetii RSA 331]
Length = 765
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 25/111 (22%)
Query: 85 IIVVEDVADLWALERSKAVNAL-------Y-HVLG-----GSLSPLDRIGPEDIGIQSLI 131
++VVE A +E+ Y HV G++ P D I+ I
Sbjct: 5 LVVVESPAKAKTIEK---YLGKDFKVMASYGHVRDLIPKEGAVDPEDHFKMHYQAIERNI 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGID----VKITRL 173
++ K L A EG+ A ++ L+ + K +R+
Sbjct: 62 RHMDAIAKALKPCHNLYLATDPDREGEAIAWHVKQMLESRNGLKDKKFSRV 112
>gi|157145359|ref|YP_001452679.1| Holliday junction DNA helicase RuvA [Citrobacter koseri ATCC
BAA-895]
gi|166230539|sp|A8AFI0|RUVA_CITK8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|157082564|gb|ABV12242.1| hypothetical protein CKO_01099 [Citrobacter koseri ATCC BAA-895]
Length = 203
Score = 37.3 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERL---IVEMKD 130
>gi|297520077|ref|ZP_06938463.1| Holliday junction DNA helicase RuvA [Escherichia coli OP50]
Length = 108
Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
+ L ++PG G ++A R +V+ K+
Sbjct: 12 VGALVKLPGIGKKTAERL---IVEMKD 35
>gi|291280036|ref|YP_003496871.1| Holliday junction DNA helicase RuvA [Deferribacter desulfuricans
SSM1]
gi|290754738|dbj|BAI81115.1| Holliday junction DNA helicase RuvA [Deferribacter desulfuricans
SSM1]
Length = 191
Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
LA IPG G ++A R L L
Sbjct: 110 LASIPGIGKKTAERIVLEL 128
>gi|215427996|ref|ZP_03425915.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis
T92]
gi|289751217|ref|ZP_06510595.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
T92]
gi|289691804|gb|EFD59233.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis
T92]
Length = 196
Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
+ L R+PG G R A R L L + + + A++ + V
Sbjct: 106 VAALTRVPGIGKRGAERMVLEL--RDKVGVAATGGALSTNGHAVR 148
>gi|167552471|ref|ZP_02346224.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205322886|gb|EDZ10725.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 203
Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|222099496|ref|YP_002534064.1| Holliday junction DNA helicase [Thermotoga neapolitana DSM 4359]
gi|61657322|emb|CAI44241.1| holliday junction DNA helicase [Thermotoga neapolitana]
gi|221571886|gb|ACM22698.1| Holliday junction DNA helicase [Thermotoga neapolitana DSM 4359]
Length = 191
Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRATLHL 35
++ ++++ LI + L++IPG ++A R + L
Sbjct: 93 LSSEDVDTLISMINSQDVEGLSKIPGISRKTAERIVMEL 131
>gi|300868186|ref|ZP_07112818.1| Holliday junction ATP-dependent DNA helicase ruvA [Oscillatoria sp.
PCC 6506]
gi|300333810|emb|CBN58002.1| Holliday junction ATP-dependent DNA helicase ruvA [Oscillatoria sp.
PCC 6506]
Length = 207
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
+++L++ LA+ PG G ++A R L L
Sbjct: 99 LQDLVQAIVGGNTRILAKTPGVGNKTAERLVLEL 132
>gi|224827243|ref|ZP_03700337.1| Holliday junction DNA helicase RuvA [Lutiella nitroferrum 2002]
gi|224600532|gb|EEG06721.1| Holliday junction DNA helicase RuvA [Lutiella nitroferrum 2002]
Length = 197
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHL 35
+ ++++ L + +PG G ++A R L L
Sbjct: 102 VASEDLKRL----SSVPGIGKKTAERLVLEL 128
>gi|168238525|ref|ZP_02663583.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194736016|ref|YP_002114930.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|204930984|ref|ZP_03221810.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|229560126|sp|B4TYR8|RUVA_SALSV RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|194711518|gb|ACF90739.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197288628|gb|EDY28003.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204320028|gb|EDZ05233.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322616895|gb|EFY13803.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618133|gb|EFY15025.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625804|gb|EFY22623.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626256|gb|EFY23066.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632670|gb|EFY29415.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322639014|gb|EFY35707.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640454|gb|EFY37107.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644219|gb|EFY40764.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649542|gb|EFY45974.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655449|gb|EFY51757.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660228|gb|EFY56466.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662909|gb|EFY59116.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668094|gb|EFY64253.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674146|gb|EFY70240.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675500|gb|EFY71574.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683086|gb|EFY79102.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686780|gb|EFY82758.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195329|gb|EFZ80509.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199221|gb|EFZ84316.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204054|gb|EFZ89069.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207477|gb|EFZ92425.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210663|gb|EFZ95541.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217461|gb|EGA02180.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221952|gb|EGA06342.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224438|gb|EGA08726.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231483|gb|EGA15596.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235925|gb|EGA20004.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240495|gb|EGA24538.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245387|gb|EGA29387.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247807|gb|EGA31745.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253606|gb|EGA37434.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255035|gb|EGA38823.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260268|gb|EGA43889.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266859|gb|EGA50345.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269065|gb|EGA52521.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 203
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|62180473|ref|YP_216890.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161613551|ref|YP_001587516.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|224583600|ref|YP_002637398.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|75482773|sp|Q57NA2|RUVA_SALCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045767|sp|A9MUX3|RUVA_SALPB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254767385|sp|C0Q2F4|RUVA_SALPC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|62128106|gb|AAX65809.1| Holliday junction helicase subunit A [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161362915|gb|ABX66683.1| hypothetical protein SPAB_01271 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|224468127|gb|ACN45957.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|322714948|gb|EFZ06519.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 203
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|332366886|gb|EGJ44627.1| DNA topoisomerase TopA [Streptococcus sanguinis SK1059]
Length = 697
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 HLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|269837708|ref|YP_003319936.1| Holliday junction DNA helicase RuvA [Sphaerobacter thermophilus DSM
20745]
gi|269786971|gb|ACZ39114.1| Holliday junction DNA helicase RuvA [Sphaerobacter thermophilus DSM
20745]
Length = 193
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L+R+PG G ++A R L L
Sbjct: 107 IAALSRVPGIGKKTASRIILEL 128
>gi|157375170|ref|YP_001473770.1| Holliday junction DNA helicase RuvA [Shewanella sediminis HAW-EB3]
gi|189045772|sp|A8FUW9|RUVA_SHESH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|157317544|gb|ABV36642.1| Holliday junction DNA helicase RuvA [Shewanella sediminis HAW-EB3]
Length = 205
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|16760845|ref|NP_456462.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16765237|ref|NP_460852.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29141463|ref|NP_804805.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56413186|ref|YP_150261.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|167994196|ref|ZP_02575288.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234044|ref|ZP_02659102.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168241523|ref|ZP_02666455.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168259832|ref|ZP_02681805.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168462574|ref|ZP_02696505.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168820718|ref|ZP_02832718.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446097|ref|YP_002041160.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451798|ref|YP_002045948.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194471309|ref|ZP_03077293.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197247981|ref|YP_002146128.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197263523|ref|ZP_03163597.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362112|ref|YP_002141749.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198242475|ref|YP_002215191.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389612|ref|ZP_03216223.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205352399|ref|YP_002226200.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207856584|ref|YP_002243235.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213426405|ref|ZP_03359155.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213580455|ref|ZP_03362281.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
gi|213609154|ref|ZP_03368980.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
gi|213859991|ref|ZP_03385695.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|238912045|ref|ZP_04655882.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289824023|ref|ZP_06543621.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|54039573|sp|P66747|RUVA_SALTI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|54042202|sp|P66746|RUVA_SALTY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|81361945|sp|Q5PN01|RUVA_SALPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698738|sp|B5F3J6|RUVA_SALA4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698739|sp|B5FSN7|RUVA_SALDC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698740|sp|B5R1V8|RUVA_SALEP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698741|sp|B5R8E2|RUVA_SALG2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560123|sp|B4T7Z3|RUVA_SALHS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560124|sp|B4SVE5|RUVA_SALNS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560125|sp|B5BH60|RUVA_SALPK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|25299990|pir||AC0743 Holliday junction DNA helicase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16420431|gb|AAL20811.1| Holliday junction helicase subunit A [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16503142|emb|CAD05646.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137090|gb|AAO68654.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127443|gb|AAV76949.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194404760|gb|ACF64982.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194410102|gb|ACF70321.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457673|gb|EDX46512.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|195634327|gb|EDX52679.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197093589|emb|CAR59052.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197211684|gb|ACH49081.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241778|gb|EDY24398.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197936991|gb|ACH74324.1| holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602057|gb|EDZ00603.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205272180|emb|CAR37038.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205327892|gb|EDZ14656.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331994|gb|EDZ18758.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339435|gb|EDZ26199.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205342743|gb|EDZ29507.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205350710|gb|EDZ37341.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708387|emb|CAR32691.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261247066|emb|CBG24885.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993877|gb|ACY88762.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301158416|emb|CBW17923.1| Holliday junction DNA helicase ruvA [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912889|dbj|BAJ36863.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320085488|emb|CBY95269.1| Holliday junction ATP-dependent DNA helicase ruvA [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321224538|gb|EFX49601.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130179|gb|ADX17609.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326627451|gb|EGE33794.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332988789|gb|AEF07772.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 203
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|313682066|ref|YP_004059804.1| holliday junction DNA helicase subunit ruva [Sulfuricurvum kujiense
DSM 16994]
gi|313154926|gb|ADR33604.1| Holliday junction DNA helicase subunit RuvA [Sulfuricurvum kujiense
DSM 16994]
Length = 187
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 14 IKILARIPGFGPRSARRA 31
I L ++PG GP+SA R
Sbjct: 105 INALKKVPGIGPKSAGRI 122
>gi|163751784|ref|ZP_02159001.1| Holliday junction DNA helicase RuvA [Shewanella benthica KT99]
gi|161328348|gb|EDP99508.1| Holliday junction DNA helicase RuvA [Shewanella benthica KT99]
Length = 205
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IATLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|154249403|ref|YP_001410228.1| radical SAM domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153339|gb|ABS60571.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 535
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 9 EIENL-IKILARIPGFGPRSARRA 31
E+ L I+ L IPG G ++A R
Sbjct: 486 ELNKLTIEELESIPGIGKKNALRI 509
>gi|77918021|ref|YP_355836.1| DNA topoisomerase I [Pelobacter carbinolicus DSM 2380]
gi|77544104|gb|ABA87666.1| DNA topoisomerase I [Pelobacter carbinolicus DSM 2380]
Length = 841
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 23/98 (23%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------------LSPLDRIGPEDI 125
+++VE A +E+ Y VL SPL + PE
Sbjct: 5 LVIVESPAKAKTIEK---FLGPGYKVLASYGHVRALPSKQGSVDVEHNFSPLYHVLPESQ 61
Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
L+++ E KK RELI A EG+ A ++++ L
Sbjct: 62 KHIELLKK-EAKKSRELILATDPDREGEAIAWHLLEAL 98
>gi|304413290|ref|ZP_07394763.1| DNA-binding subunit of Holliday junction resolvasome [Candidatus
Regiella insecticola LSR1]
gi|304284133|gb|EFL92526.1| DNA-binding subunit of Holliday junction resolvasome [Candidatus
Regiella insecticola LSR1]
Length = 202
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
Query: 8 KEIENLIKILARIPGFGPRSARRAT 32
+EI LI ++PG G ++A R
Sbjct: 105 EEISTLI----KLPGVGKKTAERLV 125
>gi|170769415|ref|ZP_02903868.1| Holliday junction DNA helicase RuvA [Escherichia albertii TW07627]
gi|170121739|gb|EDS90670.1| Holliday junction DNA helicase RuvA [Escherichia albertii TW07627]
Length = 203
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERL---IVEMKD 130
>gi|315050208|ref|XP_003174478.1| calcium-transporting ATPase 1 [Arthroderma gypseum CBS 118893]
gi|311339793|gb|EFQ98995.1| calcium-transporting ATPase 1 [Arthroderma gypseum CBS 118893]
Length = 1058
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 103 VNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162
L + G + D P + I R+ ++ ++ T + +TTA I K
Sbjct: 647 YTGL--IFSGLVGMND---PPRKDVHKSIRRLMAGGVKVIMI----TGDAETTAVAIAKK 697
Query: 163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
L G+ + + A + G E+D+++ + EAI
Sbjct: 698 L-GMPINSSSAARPVLRGDEIDHMNTEELAEAISG 731
>gi|309811443|ref|ZP_07705229.1| Holliday junction DNA helicase RuvA [Dermacoccus sp. Ellin185]
gi|308434590|gb|EFP58436.1| Holliday junction DNA helicase RuvA [Dermacoccus sp. Ellin185]
Length = 201
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
++ L ++PG G + A R L L
Sbjct: 106 VRALTKVPGIGKKGAERIVLEL 127
>gi|297559814|ref|YP_003678788.1| Holliday junction DNA helicase RuvA [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296844262|gb|ADH66282.1| Holliday junction DNA helicase RuvA [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 206
Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L R+PG G + A+R L L
Sbjct: 108 ALTRVPGIGKKGAQRIVLEL 127
>gi|226311452|ref|YP_002771346.1| Holliday junction ATP-dependent DNA helicase [Brevibacillus brevis
NBRC 100599]
gi|254766947|sp|C0ZAN3|RUVA_BREBN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226094400|dbj|BAH42842.1| Holliday junction ATP-dependent DNA helicase [Brevibacillus brevis
NBRC 100599]
Length = 205
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
L + PG G ++A+R ++ K++L+G A+ +
Sbjct: 109 LTKFPGIGKKTAQRI---ILDLKDKLVGYTPSAILTVAA 144
>gi|332993889|gb|AEF03944.1| Holliday junction DNA helicase motor protein [Alteromonas sp. SN2]
Length = 206
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L +PG G ++A R + L
Sbjct: 107 VSALVSLPGIGKKTAERLVVEL 128
>gi|319638740|ref|ZP_07993499.1| Holliday junction ATP-dependent DNA helicase ruvA [Neisseria mucosa
C102]
gi|317399981|gb|EFV80643.1| Holliday junction ATP-dependent DNA helicase ruvA [Neisseria mucosa
C102]
Length = 194
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ E+ + L+ PG G ++A R L L
Sbjct: 91 SAMNADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128
>gi|237731899|ref|ZP_04562380.1| holliday junction helicase subunit B [Citrobacter sp. 30_2]
gi|226907438|gb|EEH93356.1| holliday junction helicase subunit B [Citrobacter sp. 30_2]
Length = 203
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|332290325|ref|YP_004421177.1| Holliday junction DNA helicase RuvA [Gallibacterium anatis UMN179]
gi|330433221|gb|AEC18280.1| Holliday junction DNA helicase RuvA [Gallibacterium anatis UMN179]
Length = 202
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+++ PG G ++A R
Sbjct: 93 MSVSEFSYAIER--EELSKLVKIPGVGKKTAERL 124
>gi|283832740|ref|ZP_06352481.1| holliday junction DNA helicase RuvA [Citrobacter youngae ATCC
29220]
gi|291072423|gb|EFE10532.1| holliday junction DNA helicase RuvA [Citrobacter youngae ATCC
29220]
Length = 203
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130
>gi|188585553|ref|YP_001917098.1| helix-hairpin-helix motif [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350240|gb|ACB84510.1| helix-hairpin-helix motif [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 425
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 4 KITGKEIENLIK-ILARIPGFGPRSARRATLHLVKKKE------QLLGPLAEAMANIY 54
+ +EI K +L RIPG GP+SARR +K ++ + L + +
Sbjct: 333 HLFPQEINQASKKMLLRIPGIGPKSARRI----LKARKHFQLGFEDLKRMGIVLKRAK 386
>gi|323702066|ref|ZP_08113734.1| Holliday junction DNA helicase RuvA [Desulfotomaculum nigrificans
DSM 574]
gi|323532948|gb|EGB22819.1| Holliday junction DNA helicase RuvA [Desulfotomaculum nigrificans
DSM 574]
Length = 199
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L ++PG G ++A+R L L
Sbjct: 105 VNQLVKVPGVGKKTAQRIMLEL 126
>gi|119896893|ref|YP_932106.1| Holliday junction DNA helicase RuvA [Azoarcus sp. BH72]
gi|166230515|sp|A1K314|RUVA_AZOSB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|119669306|emb|CAL93219.1| holliday junction DNA helicase [Azoarcus sp. BH72]
Length = 199
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46
L +IPG G ++A R L++ +++L L
Sbjct: 110 LVKIPGIGKKTAERL---LLELRDKLGKAL 136
>gi|134299518|ref|YP_001113014.1| Holliday junction DNA helicase RuvA [Desulfotomaculum reducens
MI-1]
gi|172044284|sp|A4J536|RUVA_DESRM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|134052218|gb|ABO50189.1| Holliday junction DNA helicase subunit RuvA [Desulfotomaculum
reducens MI-1]
Length = 199
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHL 35
IE+ + L ++PG G ++A+R L L
Sbjct: 101 AIED-VNQLVKVPGVGKKTAQRILLEL 126
>gi|152970923|ref|YP_001336032.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206580323|ref|YP_002237747.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae 342]
gi|238895438|ref|YP_002920173.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae
NTUH-K2044]
gi|262041978|ref|ZP_06015160.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288934605|ref|YP_003438664.1| Holliday junction DNA helicase RuvA [Klebsiella variicola At-22]
gi|290508806|ref|ZP_06548177.1| Holliday junction DNA helicase RuvA [Klebsiella sp. 1_1_55]
gi|330001163|ref|ZP_08303909.1| Holliday junction DNA helicase RuvA [Klebsiella sp. MS 92-3]
gi|166230560|sp|A6TB31|RUVA_KLEP7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226698734|sp|B5XQ04|RUVA_KLEP3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|150955772|gb|ABR77802.1| Holliday junction DNA helicase motor protein [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206569381|gb|ACI11157.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae 342]
gi|238547755|dbj|BAH64106.1| Holliday junction DNA helicase motor protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259040676|gb|EEW41765.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288889314|gb|ADC57632.1| Holliday junction DNA helicase RuvA [Klebsiella variicola At-22]
gi|289778200|gb|EFD86197.1| Holliday junction DNA helicase RuvA [Klebsiella sp. 1_1_55]
gi|328537774|gb|EGF63974.1| Holliday junction DNA helicase RuvA [Klebsiella sp. MS 92-3]
Length = 203
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKE 40
M + +E + L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVASLVKLPGIGKKTAERL---IVEMKD 130
>gi|86605208|ref|YP_473971.1| Holliday junction DNA helicase RuvA [Synechococcus sp. JA-3-3Ab]
gi|123765632|sp|Q2JWZ2|RUVA_SYNJA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|86553750|gb|ABC98708.1| Holliday junction DNA helicase RuvA [Synechococcus sp. JA-3-3Ab]
Length = 204
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+++L+ PG G ++A+R L L
Sbjct: 110 VRLLSLTPGVGHKTAQRLALEL 131
>gi|319778457|ref|YP_004129370.1| Holliday junction DNA helicase RuvA [Taylorella equigenitalis MCE9]
gi|317108481|gb|ADU91227.1| Holliday junction DNA helicase RuvA [Taylorella equigenitalis MCE9]
Length = 191
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
++ + N I+ L R+PG G ++A R L L K K + L +N+ N
Sbjct: 93 MSPDALYNAIEEQDSSQLERVPGIGKKTAARIILEL-KGKLPEISTLNNTTSNLKNH 148
>gi|123966300|ref|YP_001011381.1| helix-hairpin-helix DNA-binding motif-containing protein
[Prochlorococcus marinus str. MIT 9515]
gi|123200666|gb|ABM72274.1| Helix-hairpin-helix DNA-binding motif class 1 [Prochlorococcus
marinus str. MIT 9515]
Length = 110
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Query: 12 NLIKILARIPGFGPRSARRATLH 34
LI+ L IPG G +SA +
Sbjct: 54 KLIEALKAIPGVGAKSAE--AFY 74
>gi|269967685|ref|ZP_06181735.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus
40B]
gi|269827772|gb|EEZ82056.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus
40B]
Length = 234
Score = 36.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 138 VSTLVKLPGVGKKTAERLV 156
>gi|307105926|gb|EFN54173.1| hypothetical protein CHLNCDRAFT_16754 [Chlorella variabilis]
Length = 291
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQ 41
E ++ L +PG GP+ A L + K E
Sbjct: 203 PYEEAVEELCTLPGIGPKVAACIALFSLDKHEA 235
>gi|322420882|ref|YP_004200105.1| Holliday junction DNA helicase RuvA [Geobacter sp. M18]
gi|320127269|gb|ADW14829.1| Holliday junction DNA helicase RuvA [Geobacter sp. M18]
Length = 199
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L+ IPG G ++A R L L
Sbjct: 110 LSAIPGIGKKTAERLVLEL 128
>gi|146312076|ref|YP_001177150.1| Holliday junction DNA helicase RuvA [Enterobacter sp. 638]
gi|167012660|sp|A4WBL9|RUVA_ENT38 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|145318952|gb|ABP61099.1| Holliday junction DNA helicase subunit RuvA [Enterobacter sp. 638]
Length = 203
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ + N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAHQFVNAVEREDPAALIKLPGIGKKTAERL---IVEMKD 130
>gi|317491787|ref|ZP_07950222.1| Holliday junction DNA helicase RuvA [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920221|gb|EFV41545.1| Holliday junction DNA helicase RuvA [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 204
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRAT 32
M + IE + L ++PG G ++A R
Sbjct: 93 MSAQQFVTAIEREEVSTLVKLPGVGKKTAERLV 125
>gi|315222962|ref|ZP_07864841.1| DNA topoisomerase I [Streptococcus anginosus F0211]
gi|315187912|gb|EFU21648.1| DNA topoisomerase I [Streptococcus anginosus F0211]
Length = 697
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + PE I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPEYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVYLASDPDREGEAISWHLAHIL 111
>gi|257095744|ref|YP_003169385.1| Holliday junction DNA helicase RuvA [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048268|gb|ACV37456.1| Holliday junction DNA helicase RuvA [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 191
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
+ L ++PG G ++A R L++ K +L L ++A
Sbjct: 107 VGRLTKVPGIGTKTAERL---LLELKGKLADALPASIAPA 143
>gi|257063440|ref|YP_003143112.1| Holliday junction DNA helicase, RuvA subunit [Slackia
heliotrinireducens DSM 20476]
gi|256791093|gb|ACV21763.1| Holliday junction DNA helicase, RuvA subunit [Slackia
heliotrinireducens DSM 20476]
Length = 197
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
+E+ N I K ++ IPG G ++A+R L L
Sbjct: 93 YKPEELANAIAAGDVKAVSMIPGVGKKTAQRMILEL 128
>gi|220935403|ref|YP_002514302.1| DNA recombination protein, RuvA [Thioalkalivibrio sp. HL-EbGR7]
gi|254767396|sp|B8GUJ5|RUVA_THISH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|219996713|gb|ACL73315.1| DNA recombination protein, RuvA [Thioalkalivibrio sp. HL-EbGR7]
Length = 201
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L R+PG G ++A R
Sbjct: 107 VASLVRLPGIGRKTAERLV 125
>gi|229918406|ref|YP_002887052.1| Holliday junction DNA helicase RuvA [Exiguobacterium sp. AT1b]
gi|259495643|sp|C4L522|RUVA_EXISA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229469835|gb|ACQ71607.1| Holliday junction DNA helicase RuvA [Exiguobacterium sp. AT1b]
Length = 195
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
+ +I+ LI L + PG G ++A++ L L
Sbjct: 88 VASGDIDALIDAIETENEKYLTKFPGVGKKTAKQMALDL 126
>gi|182415003|ref|YP_001820069.1| Holliday junction DNA helicase RuvA [Opitutus terrae PB90-1]
gi|229560110|sp|B1ZN17|RUVA_OPITP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|177842217|gb|ACB76469.1| Holliday junction DNA helicase RuvA [Opitutus terrae PB90-1]
Length = 200
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
++ +E+ I+ LA+ PG G ++A R + L
Sbjct: 92 SRLALPSLESAIRMGDVASLAKCPGIGKKTAERLVVEL 129
>gi|317048520|ref|YP_004116168.1| Holliday junction DNA helicase RuvA [Pantoea sp. At-9b]
gi|316950137|gb|ADU69612.1| Holliday junction DNA helicase RuvA [Pantoea sp. At-9b]
Length = 204
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 IKILARIPGFGPRSARRAT 32
I +L ++PG G ++A R
Sbjct: 107 IAVLVKLPGVGKKTAERLV 125
>gi|257455268|ref|ZP_05620503.1| holliday junction DNA helicase RuvA [Enhydrobacter aerosaccus SK60]
gi|257447230|gb|EEV22238.1| holliday junction DNA helicase RuvA [Enhydrobacter aerosaccus SK60]
Length = 206
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 18/44 (40%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
L RIPG G ++A+R + + +K+
Sbjct: 109 ALTRIPGVGKKTAQRL------------------IVELKDKIKH 134
>gi|256825358|ref|YP_003149318.1| Holliday junction DNA helicase subunit RuvA [Kytococcus sedentarius
DSM 20547]
gi|256688751|gb|ACV06553.1| Holliday junction DNA helicase subunit RuvA [Kytococcus sedentarius
DSM 20547]
Length = 209
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKK 38
++ E+ + L +PG G + A+R L LV K
Sbjct: 92 LSPAELSRAVHTEDLAALTSVPGIGKKGAQRLVLELVGK 130
>gi|148263482|ref|YP_001230188.1| Holliday junction DNA helicase RuvA [Geobacter uraniireducens Rf4]
gi|146396982|gb|ABQ25615.1| Holliday junction DNA helicase subunit RuvA [Geobacter
uraniireducens Rf4]
Length = 199
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L+ IPG G ++A R L L
Sbjct: 110 LSAIPGIGKKTAERLVLEL 128
>gi|238916873|ref|YP_002930390.1| Holliday junction DNA helicase RuvA [Eubacterium eligens ATCC
27750]
gi|259495642|sp|C4Z030|RUVA_EUBE2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|238872233|gb|ACR71943.1| Holliday junction DNA helicase RuvA [Eubacterium eligens ATCC
27750]
Length = 207
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAE 48
+ + +PG GP++A++ + L +K E L++
Sbjct: 107 VAAIKALPGIGPKTAQKIIIELKDKLKLDEVFESALSK 144
>gi|256823080|ref|YP_003147043.1| Holliday junction DNA helicase RuvA [Kangiella koreensis DSM 16069]
gi|256796619|gb|ACV27275.1| Holliday junction DNA helicase RuvA [Kangiella koreensis DSM 16069]
Length = 205
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
+ L ++PG G ++A R LV+ +
Sbjct: 108 VDRLVKLPGVGKKTAERL---LVEMSD 131
>gi|254360614|ref|ZP_04976763.1| crossover junction endonuclease RuvA [Mannheimia haemolytica
PHL213]
gi|153091154|gb|EDN73159.1| crossover junction endonuclease RuvA [Mannheimia haemolytica
PHL213]
Length = 201
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IEN + LA++ PG G ++A R
Sbjct: 93 MSVSQFATAIEN--EELAKLTKIPGIGRKTAERL 124
>gi|78044333|ref|YP_360355.1| Holliday junction DNA helicase RuvA [Carboxydothermus
hydrogenoformans Z-2901]
gi|90134706|sp|Q3ABX9|RUVA_CARHZ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|77996448|gb|ABB15347.1| Holliday junction DNA helicase RuvA [Carboxydothermus
hydrogenoformans Z-2901]
Length = 195
Score = 36.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
+ T +++ +I K L ++PG G ++A+R L L
Sbjct: 90 NEFTPEKLNWVIANKDEKALTKVPGVGKKNAQRLFLEL 127
>gi|289812335|ref|ZP_06542964.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 47
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 1 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 38
>gi|290968891|ref|ZP_06560428.1| DNA topoisomerase [Megasphaera genomosp. type_1 str. 28L]
gi|290781187|gb|EFD93778.1| DNA topoisomerase [Megasphaera genomosp. type_1 str. 28L]
Length = 753
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 21/105 (20%)
Query: 78 QQRDASVIIVVEDVADLWALERSKAVNAL-YHVLG--GSLSPL----------DRIGPED 124
++A +++VE A +ER Y VL G L L D P
Sbjct: 48 PPKNAKNLVIVESPAKAKTIER---FLGADYKVLASRGHLRDLPRNQLGVKIEDGFTPTY 104
Query: 125 IGI---QSLIERIEVKKI--RELIFAISATIEGQTTAHYIMDKLK 164
+ + LIE ++ + + + + A EG+ + ++ L+
Sbjct: 105 TNMWDKRKLIEELQKEYVKSKNVFLATDPDREGEAISWHLAHLLE 149
>gi|261493369|ref|ZP_05989895.1| crossover junction endonuclease RuvA [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261496635|ref|ZP_05993015.1| crossover junction endonuclease RuvA [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261307838|gb|EEY09161.1| crossover junction endonuclease RuvA [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311013|gb|EEY12190.1| crossover junction endonuclease RuvA [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 201
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IEN + LA++ PG G ++A R
Sbjct: 93 MSVSQFATAIEN--EELAKLTKIPGIGRKTAERL 124
>gi|167770542|ref|ZP_02442595.1| hypothetical protein ANACOL_01888 [Anaerotruncus colihominis DSM
17241]
gi|167667137|gb|EDS11267.1| hypothetical protein ANACOL_01888 [Anaerotruncus colihominis DSM
17241]
Length = 172
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVK-KKEQLLGPLAEAMANIYNK 56
+T ++ I K L PG GP++A+R +++ K L+ M+ + ++
Sbjct: 63 SDMTPDKLALCIAAGDSKSLRAAPGIGPKAAQRI---ILECKDRIGASELSGEMSEVASQ 119
Query: 57 VCL 59
+
Sbjct: 120 LRH 122
>gi|229592301|ref|YP_002874420.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens SBW25]
gi|312962759|ref|ZP_07777247.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas
fluorescens WH6]
gi|259495652|sp|C3JYS8|RUVA_PSEFS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229364167|emb|CAY51821.1| holliday junction helicase subunit B [Pseudomonas fluorescens
SBW25]
gi|311282976|gb|EFQ61569.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas
fluorescens WH6]
Length = 203
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRA 31
++ E++ L++ L ++PG G ++A R
Sbjct: 90 MSSLEVDELVRAVSAQDTSALTKVPGVGKKTAERL 124
>gi|227495489|ref|ZP_03925805.1| possible crossover junction endodeoxyribonuclease [Actinomyces
coleocanis DSM 15436]
gi|226831036|gb|EEH63419.1| possible crossover junction endodeoxyribonuclease [Actinomyces
coleocanis DSM 15436]
Length = 195
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 17 LARIPGFGPRSARRA 31
L RIPG G +SA+R
Sbjct: 109 LQRIPGIGKKSAQRM 123
>gi|237809451|ref|YP_002893891.1| Holliday junction DNA helicase RuvA [Tolumonas auensis DSM 9187]
gi|259495658|sp|C4LBN1|RUVA_TOLAT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|237501712|gb|ACQ94305.1| Holliday junction DNA helicase RuvA [Tolumonas auensis DSM 9187]
Length = 206
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
+ L ++PG G ++A R +V+ K+
Sbjct: 107 VSSLVKLPGVGKKTAERL---IVEMKD 130
>gi|206889566|ref|YP_002248893.1| DNA topoisomerase I [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741504|gb|ACI20561.1| DNA topoisomerase I [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 777
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 118 DRIGPEDIGIQSLIE-----RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITR 172
P+ I I + + K +++ A EG+ A++I +++K + K+ R
Sbjct: 51 KGFQPDYIIIPGKEKIVKELKDSAKNAQKIFIATDPDREGEAIAYHIAEEIKVPENKVYR 110
>gi|330836553|ref|YP_004411194.1| Holliday junction ATP-dependent DNA helicase ruvA [Spirochaeta
coccoides DSM 17374]
gi|329748456|gb|AEC01812.1| Holliday junction ATP-dependent DNA helicase ruvA [Spirochaeta
coccoides DSM 17374]
Length = 209
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L+RIPG G ++A+R L L
Sbjct: 111 VKTLSRIPGVGSKTAQRLILAL 132
>gi|85712318|ref|ZP_01043369.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina
baltica OS145]
gi|85693945|gb|EAQ31892.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina
baltica OS145]
Length = 206
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSRLVKLPGVGKKTAERLV 125
>gi|322437324|ref|YP_004219536.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX9]
gi|321165051|gb|ADW70756.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX9]
Length = 196
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
L +IPG G ++A R L L + L +A A
Sbjct: 108 DTLVKIPGIGKKTAERVVLEL----KDKLDDMATAPVAAVQSHGP 148
>gi|329117951|ref|ZP_08246664.1| toprim domain protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465839|gb|EGF12111.1| toprim domain protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 791
Score = 36.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 11 ENLIKILARIPGFGPRSARRATL-----HLVKKKEQLLGPLAEAMAN 52
E +I+ ++ +P GP++A + +L + E + + M
Sbjct: 281 ERVIQAISALPTIGPKTAAKLVQTYGESYLAEILENNVQAFSNLMDE 327
>gi|332670539|ref|YP_004453547.1| Holliday junction DNA helicase RuvA [Cellulomonas fimi ATCC 484]
gi|332339577|gb|AEE46160.1| Holliday junction DNA helicase RuvA [Cellulomonas fimi ATCC 484]
Length = 204
Score = 36.9 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L R+PG G + A+R L L
Sbjct: 108 ALMRVPGIGRKGAQRIVLEL 127
>gi|256827686|ref|YP_003151645.1| Holliday junction DNA helicase, RuvA subunit [Cryptobacterium
curtum DSM 15641]
gi|256583829|gb|ACU94963.1| Holliday junction DNA helicase, RuvA subunit [Cryptobacterium
curtum DSM 15641]
Length = 194
Score = 36.9 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 18 ARIPGFGPRSARRATLHL 35
+RIPG G ++A+R L L
Sbjct: 111 SRIPGIGKKTAQRIILEL 128
>gi|145632564|ref|ZP_01788298.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 3655]
gi|229845014|ref|ZP_04465151.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 6P18H1]
gi|144986759|gb|EDJ93311.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 3655]
gi|229812148|gb|EEP47840.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 6P18H1]
Length = 204
Score = 36.9 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|72162493|ref|YP_290150.1| Holliday junction DNA helicase subunit RuvA [Thermobifida fusca YX]
gi|90136068|sp|Q47N42|RUVA_THEFY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|71916225|gb|AAZ56127.1| Holliday junction DNA helicase subunit RuvA [Thermobifida fusca YX]
Length = 202
Score = 36.9 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M T + I L R+PG G + A+R L L
Sbjct: 88 MLSVHTPDALRRAIATEDTAALTRVPGIGKKGAQRIVLEL 127
>gi|119944489|ref|YP_942169.1| Holliday junction DNA helicase RuvA [Psychromonas ingrahamii 37]
gi|166230588|sp|A1SSV5|RUVA_PSYIN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|119863093|gb|ABM02570.1| Holliday junction DNA helicase subunit RuvA [Psychromonas
ingrahamii 37]
Length = 207
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 11 ENLIKILARIPGFGPRSARRAT 32
+ + L ++PG G ++A R
Sbjct: 104 NDAVTTLVKLPGVGKKTAERLV 125
>gi|332829079|gb|EGK01743.1| hypothetical protein HMPREF9455_01891 [Dysgonomonas gadei ATCC
BAA-286]
Length = 234
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 149 TIEGQT----TAHYIMDKLKGIDVKITRLAYGIP 178
T EG T +YI + L ++ ++R+A G+P
Sbjct: 100 TAEGDAGFYSTIYYISEYLTQENIPVSRIA-GVP 132
>gi|329893679|ref|ZP_08269813.1| Holliday junction DNA helicase RuvA [gamma proteobacterium
IMCC3088]
gi|328923606|gb|EGG30918.1| Holliday junction DNA helicase RuvA [gamma proteobacterium
IMCC3088]
Length = 205
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
+ L +PG G ++A R +V+ +++L L++
Sbjct: 107 VSALVALPGVGKKTAERL---IVEMRDRLGDWLSQ 138
>gi|255325096|ref|ZP_05366202.1| holliday junction DNA helicase RuvA [Corynebacterium
tuberculostearicum SK141]
gi|255297661|gb|EET76972.1| holliday junction DNA helicase RuvA [Corynebacterium
tuberculostearicum SK141]
Length = 205
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L IPG G R A+R L L
Sbjct: 106 VKALQSIPGVGKRMAQRLALEL 127
>gi|238788520|ref|ZP_04632313.1| Holliday junction DNA helicase RuvA [Yersinia frederiksenii ATCC
33641]
gi|238723433|gb|EEQ15080.1| Holliday junction DNA helicase RuvA [Yersinia frederiksenii ATCC
33641]
Length = 194
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 98 ITTLVKLPGVGKKTAERLV 116
>gi|307153472|ref|YP_003888856.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7822]
gi|306983700|gb|ADN15581.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7822]
Length = 209
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
+E L++ LA+ PG GP++A R L L
Sbjct: 101 LEELVRAIMSNNGRTLAKSPGIGPKTAERILLEL 134
>gi|70732089|ref|YP_261845.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens Pf-5]
gi|90135592|sp|Q4K7D8|RUVA_PSEF5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|68346388|gb|AAY93994.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens Pf-5]
Length = 202
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++ E++ L++ L ++PG G ++A R
Sbjct: 90 MSSLEVDELVRCVQAQDTSALTKVPGVGKKTAERL 124
>gi|311104199|ref|YP_003977052.1| holliday junction DNA helicase RuvA [Achromobacter xylosoxidans A8]
gi|310758888|gb|ADP14337.1| holliday junction DNA helicase RuvA [Achromobacter xylosoxidans A8]
Length = 190
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
L R+PG G ++A R L++ + +L + + +
Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGASPHAAPDN 146
>gi|308125357|ref|ZP_05774780.2| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus K5030]
gi|308113231|gb|EFO50771.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus K5030]
Length = 223
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 126 VSTLVKLPGVGKKTAERLV 144
>gi|262394694|ref|YP_003286548.1| holliday junction DNA helicase RuvA [Vibrio sp. Ex25]
gi|262338288|gb|ACY52083.1| holliday junction DNA helicase RuvA [Vibrio sp. Ex25]
Length = 203
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|307299266|ref|ZP_07579067.1| Holliday junction DNA helicase RuvA [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306915062|gb|EFN45448.1| Holliday junction DNA helicase RuvA [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 197
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 ILARIPGFGPRSARRA 31
L+ +PG G ++A R
Sbjct: 109 ELSSLPGIGKKTAERM 124
>gi|270262223|ref|ZP_06190495.1| holliday junction ATP-dependent DNA helicase RuvA [Serratia
odorifera 4Rx13]
gi|270044099|gb|EFA17191.1| holliday junction ATP-dependent DNA helicase RuvA [Serratia
odorifera 4Rx13]
Length = 204
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|262170575|ref|ZP_06038253.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio mimicus MB-451]
gi|261891651|gb|EEY37637.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio mimicus MB-451]
Length = 194
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
+ LI + +P SA+R L+L E PL E + +V
Sbjct: 29 QQLIHTFSTLPDI--ASAQRIALYLANDGELNTQPLIEWLWQQSKQV 73
>gi|311739557|ref|ZP_07713392.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311305373|gb|EFQ81441.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 205
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L IPG G R A+R L L
Sbjct: 106 VKALQSIPGVGKRMAQRLALEL 127
>gi|154249486|ref|YP_001410311.1| Holliday junction DNA helicase RuvA [Fervidobacterium nodosum
Rt17-B1]
gi|171769439|sp|A7HL71|RUVA_FERNB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|154153422|gb|ABS60654.1| Holliday junction DNA helicase RuvA [Fervidobacterium nodosum
Rt17-B1]
Length = 188
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 14 IKILARIPGFGPRSARRA 31
++ L+ IPG G ++A R
Sbjct: 106 VEKLSSIPGIGRKTAERM 123
>gi|90022179|ref|YP_528006.1| Holliday junction DNA helicase subunit RuvA [Saccharophagus
degradans 2-40]
gi|122996073|sp|Q21HN5|RUVA_SACD2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|89951779|gb|ABD81794.1| Holliday junction DNA helicase subunit RuvA [Saccharophagus
degradans 2-40]
Length = 207
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPL 46
L ++PG G ++A R LV + L
Sbjct: 108 ALVKLPGVGKKTAERL---LVDM-RDRVKAL 134
>gi|302872363|ref|YP_003840999.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575222|gb|ADL43013.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 415
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SARR H ++ + L + +
Sbjct: 320 EELIRVPGIGIKSARRIIKNRVFHSLE--FEDLKKMGVVLKRAK 361
>gi|262282056|ref|ZP_06059825.1| ATP-dependent DNA helicase RecG [Streptococcus sp. 2_1_36FAA]
gi|262262510|gb|EEY81207.1| ATP-dependent DNA helicase RecG [Streptococcus sp. 2_1_36FAA]
Length = 671
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L+ +PG GP+SA +
Sbjct: 2 NLHQPLSVLPGVGPKSAEKFA 22
>gi|238792583|ref|ZP_04636216.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia
intermedia ATCC 29909]
gi|238728218|gb|EEQ19739.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia
intermedia ATCC 29909]
Length = 188
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 91 ITTLVKLPGVGKKTAERLV 109
>gi|91227614|ref|ZP_01261918.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus
12G01]
gi|91188507|gb|EAS74800.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus
12G01]
Length = 203
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|227879129|ref|ZP_03997013.1| DNA topoisomerase [Lactobacillus crispatus JV-V01]
gi|256843162|ref|ZP_05548650.1| DNA topoisomerase I [Lactobacillus crispatus 125-2-CHN]
gi|256850239|ref|ZP_05555668.1| DNA topoisomerase I [Lactobacillus crispatus MV-1A-US]
gi|262046369|ref|ZP_06019331.1| DNA topoisomerase I [Lactobacillus crispatus MV-3A-US]
gi|293380238|ref|ZP_06626319.1| DNA topoisomerase I [Lactobacillus crispatus 214-1]
gi|295692917|ref|YP_003601527.1| DNA topoisomerase [Lactobacillus crispatus ST1]
gi|312977297|ref|ZP_07789045.1| DNA topoisomerase [Lactobacillus crispatus CTV-05]
gi|227861286|gb|EEJ68921.1| DNA topoisomerase [Lactobacillus crispatus JV-V01]
gi|256614582|gb|EEU19783.1| DNA topoisomerase I [Lactobacillus crispatus 125-2-CHN]
gi|256712876|gb|EEU27868.1| DNA topoisomerase I [Lactobacillus crispatus MV-1A-US]
gi|260573240|gb|EEX29798.1| DNA topoisomerase I [Lactobacillus crispatus MV-3A-US]
gi|290923205|gb|EFE00127.1| DNA topoisomerase I [Lactobacillus crispatus 214-1]
gi|295031023|emb|CBL50502.1| DNA topoisomerase [Lactobacillus crispatus ST1]
gi|310895728|gb|EFQ44794.1| DNA topoisomerase [Lactobacillus crispatus CTV-05]
Length = 703
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQS-- 129
+++VE A +E+ YHV+ + D P+ I I+
Sbjct: 17 LVIVESPAKAKTIEK---YLGRNYHVIASKGHIRDLPKSQMGIDFEDDYKPKYISIRGKG 73
Query: 130 ---LIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
+ E KK +++ A EG+ A ++ L
Sbjct: 74 DTIKELKSEAKKAKDVYLASDPDREGEAIAWHVAHAL 110
>gi|221134420|ref|ZP_03560725.1| Holliday junction DNA helicase RuvA [Glaciecola sp. HTCC2999]
Length = 207
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
++G +++LI+ L +IPG G ++A R + L
Sbjct: 90 LSGMSVQDLIRAVGYEDVSSLVKIPGVGKKTAERLVVEL 128
>gi|302671008|ref|YP_003830968.1| holliday junction DNA helicase RuvA [Butyrivibrio proteoclasticus
B316]
gi|302395481|gb|ADL34386.1| holliday junction DNA helicase RuvA [Butyrivibrio proteoclasticus
B316]
Length = 207
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 15 KILARIPGFGPRSARRATLHL---VKKKEQLL 43
K L++ PG G ++A R TL L +K E L
Sbjct: 108 KSLSKAPGIGKKTAERITLELRDKLKLSEDEL 139
>gi|238796296|ref|ZP_04639805.1| Holliday junction DNA helicase RuvA [Yersinia mollaretii ATCC
43969]
gi|238719741|gb|EEQ11548.1| Holliday junction DNA helicase RuvA [Yersinia mollaretii ATCC
43969]
Length = 196
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 98 ITTLVKLPGVGKKTAERLV 116
>gi|291286413|ref|YP_003503229.1| Holliday junction DNA helicase RuvA [Denitrovibrio acetiphilus DSM
12809]
gi|290883573|gb|ADD67273.1| Holliday junction DNA helicase RuvA [Denitrovibrio acetiphilus DSM
12809]
Length = 192
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHL 35
M + + I +++ IPG G ++A R + L
Sbjct: 99 MNAVMNSE-----IGLISTIPGIGKKTAERIVVEL 128
>gi|212638555|ref|YP_002315075.1| Holliday junction DNA helicase RuvA [Anoxybacillus flavithermus
WK1]
gi|226725432|sp|B7GFM6|RUVA_ANOFW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|212560035|gb|ACJ33090.1| Holliday junction resolvasome, DNA-binding subunit [Anoxybacillus
flavithermus WK1]
Length = 197
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 23/74 (31%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRA--------------TL-HLVKKKEQ 41
+ ++E L++ L + PG G ++AR+ +L + +
Sbjct: 89 LAAGQLEQLVEAIEAENDQFLCKFPGVGKKTARQMILDLKGKLQAIVPDAFPNLFTEPLE 148
Query: 42 LLGPLAEAMANIYN 55
L+EA+ +
Sbjct: 149 ETNALSEAIEALKA 162
>gi|157150698|ref|YP_001449735.1| ATP-dependent DNA helicase RecG [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075492|gb|ABV10175.1| ATP-dependent DNA helicase RecG [Streptococcus gordonii str.
Challis substr. CH1]
Length = 671
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L+ +PG GP+SA +
Sbjct: 2 NLHQPLSVLPGVGPKSAEKFA 22
>gi|145355751|ref|XP_001422114.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582354|gb|ABP00431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1394
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 2 QKKITGKEIENLI--KILARIPGFGPRSARRATL-HLVKKKEQLLGPLAEAMANIYNKVC 58
+ K IE LI + ++++P RS R HL+ ++ +G L A+A I +
Sbjct: 1272 ESPFAQKRIE-LIFAEAISKLP---RRSVLRTAFLHLIDDADKRVGRLGHALA-IRGAIR 1326
Query: 59 LCSI 62
C++
Sbjct: 1327 FCAV 1330
>gi|323495172|ref|ZP_08100257.1| Holliday junction DNA helicase RuvA [Vibrio brasiliensis LMG 20546]
gi|323310612|gb|EGA63791.1| Holliday junction DNA helicase RuvA [Vibrio brasiliensis LMG 20546]
Length = 205
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|328473203|gb|EGF44051.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus 10329]
Length = 204
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|304436498|ref|ZP_07396472.1| crossover junction ATP-dependent DNA helicase RuvA [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304370544|gb|EFM24195.1| crossover junction ATP-dependent DNA helicase RuvA [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 199
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K + ++PG G ++A R L L
Sbjct: 106 VKGITKLPGIGKKTAERILLEL 127
>gi|145636553|ref|ZP_01792221.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittHH]
gi|145270378|gb|EDK10313.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittHH]
Length = 204
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|28897825|ref|NP_797430.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus RIMD
2210633]
gi|260876984|ref|ZP_05889339.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
AN-5034]
gi|260901352|ref|ZP_05909747.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
AQ4037]
gi|31076902|sp|Q87QU8|RUVA_VIBPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|28806038|dbj|BAC59314.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus RIMD
2210633]
gi|308093747|gb|EFO43442.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
AN-5034]
gi|308109588|gb|EFO47128.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
AQ4037]
Length = 204
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|294054968|ref|YP_003548626.1| Holliday junction DNA helicase RuvA [Coraliomargarita akajimensis
DSM 45221]
gi|293614301|gb|ADE54456.1| Holliday junction DNA helicase RuvA [Coraliomargarita akajimensis
DSM 45221]
Length = 199
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+++ ++ I L++ PG G ++A R + L
Sbjct: 92 SRMSVNVLQAAIASSDVALLSKCPGIGKKTAERLVIEL 129
>gi|238756969|ref|ZP_04618157.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia aldovae
ATCC 35236]
gi|238704799|gb|EEP97328.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia aldovae
ATCC 35236]
Length = 205
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|238762969|ref|ZP_04623936.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia
kristensenii ATCC 33638]
gi|238698727|gb|EEP91477.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia
kristensenii ATCC 33638]
Length = 189
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 91 ITTLVKLPGVGKKTAERLV 109
>gi|146296053|ref|YP_001179824.1| radical SAM domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409629|gb|ABP66633.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 415
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SARR H + L + +
Sbjct: 319 EELIRVPGIGIKSARRIIKNRVFHSL--DFDDLKKIGVVLKRAK 360
>gi|166031218|ref|ZP_02234047.1| hypothetical protein DORFOR_00905 [Dorea formicigenerans ATCC
27755]
gi|166029065|gb|EDR47822.1| hypothetical protein DORFOR_00905 [Dorea formicigenerans ATCC
27755]
Length = 693
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 21/109 (19%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVL---GGSLSPL----------DRIGPEDIGIQSLI 131
+++VE A + + K +V+ G + L + P+ I I+
Sbjct: 5 LVIVESPAKVKTI---KKFLGSNYVVAASNGHVRDLPKSQLGVDVENDYEPKYITIRGKG 61
Query: 132 E-----RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
E R EVKK ++ A EG+ + ++ LK D K+ R+++
Sbjct: 62 EILANLRKEVKKADKVYLATDPDREGEAISWHLSKALKLEDKKVYRISF 110
>gi|164687538|ref|ZP_02211566.1| hypothetical protein CLOBAR_01179 [Clostridium bartlettii DSM
16795]
gi|164603312|gb|EDQ96777.1| hypothetical protein CLOBAR_01179 [Clostridium bartlettii DSM
16795]
Length = 197
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54
I L++ PG G ++A R L L K ++ + N
Sbjct: 106 IAKLSKCPGVGKKTAERIILELKDKVDKESAEFEATLFNQA 146
>gi|160942099|ref|ZP_02089414.1| hypothetical protein CLOBOL_06987 [Clostridium bolteae ATCC
BAA-613]
gi|158434990|gb|EDP12757.1| hypothetical protein CLOBOL_06987 [Clostridium bolteae ATCC
BAA-613]
Length = 209
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K LA+ PG G ++A+R L L
Sbjct: 107 VKALAKAPGIGNKTAQRLILDL 128
>gi|78485238|ref|YP_391163.1| Holliday junction DNA helicase RuvA [Thiomicrospira crunogena
XCL-2]
gi|123755243|sp|Q31H84|RUVA_THICR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|78363524|gb|ABB41489.1| Holliday junction DNA helicase subunit RuvA [Thiomicrospira
crunogena XCL-2]
Length = 200
Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRAT 32
++ + L+ L +IPG G ++A R
Sbjct: 91 SAMSVNDFVGLVDVGDAPALTKIPGVGKKTAERLV 125
>gi|330811393|ref|YP_004355855.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379501|gb|AEA70851.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 202
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++ E++ L++ L ++PG G ++A R
Sbjct: 90 MSSLEVDELVRCVQSQDTSALTKVPGVGKKTAERL 124
>gi|139438977|ref|ZP_01772437.1| Hypothetical protein COLAER_01443 [Collinsella aerofaciens ATCC
25986]
gi|133775688|gb|EBA39508.1| Hypothetical protein COLAER_01443 [Collinsella aerofaciens ATCC
25986]
Length = 206
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 17 LARIPGFGPRSARRATLHL 35
+A++PG G ++A+R L L
Sbjct: 110 MAKVPGVGKKTAQRLILEL 128
>gi|225410073|ref|ZP_03761262.1| hypothetical protein CLOSTASPAR_05294 [Clostridium asparagiforme
DSM 15981]
gi|225042421|gb|EEG52667.1| hypothetical protein CLOSTASPAR_05294 [Clostridium asparagiforme
DSM 15981]
Length = 207
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
+T ++ I K ++R PG GP++A+R L L
Sbjct: 93 MTPDDLRMAIVTGDAKAISRAPGIGPKTAQRLILDL 128
>gi|119383447|ref|YP_914503.1| Holliday junction DNA helicase motor protein [Paracoccus
denitrificans PD1222]
gi|166230580|sp|A1AZW3|RUVA_PARDP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|119373214|gb|ABL68807.1| Holliday junction DNA helicase RuvA [Paracoccus denitrificans
PD1222]
Length = 223
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMA 51
L + PG GP+ A+R + L K K + L A+
Sbjct: 108 SALRKAPGVGPKLAQRVVMEL-KDKAPAVMALGGALT 143
>gi|260898721|ref|ZP_05907217.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
Peru-466]
gi|308089527|gb|EFO39222.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
Peru-466]
Length = 147
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|251793066|ref|YP_003007792.1| Holliday junction DNA helicase RuvA [Aggregatibacter aphrophilus
NJ8700]
gi|247534459|gb|ACS97705.1| holliday junction DNA helicase RuvA [Aggregatibacter aphrophilus
NJ8700]
Length = 204
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+R+ PG G ++A R
Sbjct: 93 MSVDEFAYAIER--EELSRLVKIPGIGKKTAERL 124
>gi|24641330|ref|NP_511125.2| no distributive disjunction [Drosophila melanogaster]
gi|128497|sp|P18105|NOD_DROME RecName: Full=Kinesin-like protein Nod
gi|157780|gb|AAA28653.1| kinesin-like protein (nod) [Drosophila melanogaster]
gi|157974|gb|AAC14452.1| kinesin-like protein [Drosophila melanogaster]
gi|15150427|gb|AAK84937.1| SD02282p [Drosophila melanogaster]
gi|22833096|gb|AAF48064.2| no distributive disjunction [Drosophila melanogaster]
Length = 666
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 14 IKILARIPGFGPRSARRATLH 34
+K L IPG GP+SA LH
Sbjct: 611 VKQLQEIPGIGPKSAFSLALH 631
>gi|108807436|ref|YP_651352.1| Holliday junction DNA helicase RuvA [Yersinia pestis Antiqua]
gi|108811697|ref|YP_647464.1| Holliday junction DNA helicase RuvA [Yersinia pestis Nepal516]
gi|145598360|ref|YP_001162436.1| Holliday junction DNA helicase RuvA [Yersinia pestis Pestoides F]
gi|21959100|gb|AAM85813.1|AE013828_4 Holliday junction helicase subunit B [Yersinia pestis KIM 10]
gi|45436564|gb|AAS62118.1| Holliday junction helicase subunit B [Yersinia pestis biovar
Microtus str. 91001]
gi|51589648|emb|CAH21278.1| Holliday junction DNA helicase [Yersinia pseudotuberculosis IP
32953]
gi|108775345|gb|ABG17864.1| Holliday junction DNA helicase subunit RuvA [Yersinia pestis
Nepal516]
gi|108779349|gb|ABG13407.1| Holliday junction DNA helicase subunit RuvA [Yersinia pestis
Antiqua]
gi|145210056|gb|ABP39463.1| Holliday junction DNA helicase subunit RuvA [Yersinia pestis
Pestoides F]
Length = 226
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 129 ITTLVKLPGVGKKTAERLV 147
>gi|195566235|ref|XP_002106692.1| GD17033 [Drosophila simulans]
gi|194204078|gb|EDX17654.1| GD17033 [Drosophila simulans]
Length = 213
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 14 IKILARIPGFGPRSARRATLH 34
+K L IPG GP+SA LH
Sbjct: 158 VKQLQEIPGIGPKSAFSLALH 178
>gi|152979457|ref|YP_001345086.1| Holliday junction DNA helicase motor protein [Actinobacillus
succinogenes 130Z]
gi|171704337|sp|A6VQA4|RUVA_ACTSZ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|150841180|gb|ABR75151.1| Holliday junction DNA helicase RuvA [Actinobacillus succinogenes
130Z]
Length = 204
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 11/54 (20%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRATLHL------VKKKEQLLGP 45
M IE + L+++ PG G ++A R + L +++ + +
Sbjct: 93 MSVHEFAYAIER--EELSKLVKIPGVGKKTAERLLVELKGKFKGLRQPDFFVES 144
>gi|153839740|ref|ZP_01992407.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
AQ3810]
gi|149746738|gb|EDM57726.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus
AQ3810]
Length = 204
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VSTLVKLPGVGKKTAERLV 125
>gi|149366014|ref|ZP_01888049.1| Holliday junction DNA helicase [Yersinia pestis CA88-4125]
gi|153949523|ref|YP_001401004.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis IP
31758]
gi|161484795|ref|NP_669562.2| Holliday junction DNA helicase RuvA [Yersinia pestis KIM 10]
gi|161511391|ref|NP_993241.2| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Microtus str. 91001]
gi|161760577|ref|YP_070557.2| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis IP
32953]
gi|162420589|ref|YP_001606843.1| Holliday junction DNA helicase RuvA [Yersinia pestis Angola]
gi|165928362|ref|ZP_02224194.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938889|ref|ZP_02227443.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Orientalis str. IP275]
gi|166009183|ref|ZP_02230081.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166210491|ref|ZP_02236526.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401440|ref|ZP_02306937.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420007|ref|ZP_02311760.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424505|ref|ZP_02316258.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470862|ref|ZP_02335566.1| Holliday junction DNA helicase motor protein [Yersinia pestis FV-1]
gi|170024378|ref|YP_001720883.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis
YPIII]
gi|186895407|ref|YP_001872519.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis
PB1/+]
gi|218929164|ref|YP_002347039.1| Holliday junction DNA helicase RuvA [Yersinia pestis CO92]
gi|229894771|ref|ZP_04509951.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis Pestoides A]
gi|229897474|ref|ZP_04512630.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229898120|ref|ZP_04513269.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901979|ref|ZP_04517100.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis Nepal516]
gi|270490837|ref|ZP_06207911.1| Holliday junction DNA helicase RuvA [Yersinia pestis KIM D27]
gi|294503877|ref|YP_003567939.1| Holliday junction DNA helicase motor protein [Yersinia pestis
Z176003]
gi|20455249|sp|Q8ZEU6|RUVA_YERPE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|90146256|sp|Q66AU0|RUVA_YERPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|167012664|sp|A7FIC6|RUVA_YERP3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560143|sp|B2K323|RUVA_YERPB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560144|sp|A9QYX3|RUVA_YERPG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|229560145|sp|B1JLL1|RUVA_YERPY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|115347775|emb|CAL20692.1| Holliday junction DNA helicase [Yersinia pestis CO92]
gi|149292427|gb|EDM42501.1| Holliday junction DNA helicase [Yersinia pestis CA88-4125]
gi|152961018|gb|ABS48479.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis IP
31758]
gi|162353404|gb|ABX87352.1| Holliday junction DNA helicase RuvA [Yersinia pestis Angola]
gi|165913252|gb|EDR31875.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Orientalis str. IP275]
gi|165919645|gb|EDR36978.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165991738|gb|EDR44039.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207671|gb|EDR52151.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961702|gb|EDR57723.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049136|gb|EDR60544.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167056387|gb|EDR66156.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169750912|gb|ACA68430.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis
YPIII]
gi|186698433|gb|ACC89062.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis
PB1/+]
gi|229680875|gb|EEO76970.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis Nepal516]
gi|229688836|gb|EEO80903.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis biovar Orientalis str. India 195]
gi|229693811|gb|EEO83860.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229702244|gb|EEO90263.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis Pestoides A]
gi|262362004|gb|ACY58725.1| Holliday junction DNA helicase motor protein [Yersinia pestis
D106004]
gi|262365859|gb|ACY62416.1| Holliday junction DNA helicase motor protein [Yersinia pestis
D182038]
gi|270339341|gb|EFA50118.1| Holliday junction DNA helicase RuvA [Yersinia pestis KIM D27]
gi|294354336|gb|ADE64677.1| Holliday junction DNA helicase motor protein [Yersinia pestis
Z176003]
gi|320015265|gb|ADV98836.1| component of RuvABC resolvasome, regulatory subunit [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 204
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|238786430|ref|ZP_04630350.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia
bercovieri ATCC 43970]
gi|238712664|gb|EEQ04756.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia
bercovieri ATCC 43970]
Length = 196
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 98 ITTLVKLPGVGKKTAERLV 116
>gi|238754860|ref|ZP_04616210.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia ruckeri
ATCC 29473]
gi|238706871|gb|EEP99238.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia ruckeri
ATCC 29473]
Length = 204
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|123442635|ref|YP_001006612.1| Holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166231457|sp|A1JRJ9|RUVA_YERE8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|122089596|emb|CAL12445.1| Holliday junction DNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 205
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|160896673|ref|YP_001562255.1| Holliday junction DNA helicase RuvA [Delftia acidovorans SPH-1]
gi|229560027|sp|A9BUG7|RUVA_DELAS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|160362257|gb|ABX33870.1| Holliday junction DNA helicase RuvA [Delftia acidovorans SPH-1]
Length = 190
Score = 36.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHL 35
+ +T +E+ L+ ++PG G ++A R L L
Sbjct: 99 AQAVTLQEVGRLV----KVPGIGKKTAERLLLEL 128
>gi|238751590|ref|ZP_04613080.1| Holliday junction DNA helicase RuvA [Yersinia rohdei ATCC 43380]
gi|238710152|gb|EEQ02380.1| Holliday junction DNA helicase RuvA [Yersinia rohdei ATCC 43380]
Length = 204
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLIKLPGVGKKTAERLV 125
>gi|330444140|ref|YP_004377126.1| Holliday junction DNA helicase RuvA [Chlamydophila pecorum E58]
gi|328807250|gb|AEB41423.1| Holliday junction DNA helicase RuvA [Chlamydophila pecorum E58]
Length = 207
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
+K L+ IPG G ++A + L L K+K + PL
Sbjct: 108 VKALSSIPGIGKKTAEKLMLDL-KQKLPSVLPLG 140
>gi|238926806|ref|ZP_04658566.1| crossover junction endodeoxyribonuclease [Selenomonas flueggei ATCC
43531]
gi|238885338|gb|EEQ48976.1| crossover junction endodeoxyribonuclease [Selenomonas flueggei ATCC
43531]
Length = 199
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K + ++PG G ++A R L L
Sbjct: 106 VKGITKLPGIGKKTAERILLEL 127
>gi|94971750|ref|YP_593798.1| Holliday junction DNA helicase RuvA [Candidatus Koribacter
versatilis Ellin345]
gi|94553800|gb|ABF43724.1| Holliday junction DNA helicase subunit RuvA [Candidatus Koribacter
versatilis Ellin345]
Length = 202
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L +IPG G ++A R L L
Sbjct: 118 LTKIPGVGKKTAERMILEL 136
>gi|294011702|ref|YP_003545162.1| DNA topoisomerase I [Sphingobium japonicum UT26S]
gi|292675032|dbj|BAI96550.1| DNA topoisomerase I [Sphingobium japonicum UT26S]
Length = 862
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 22/110 (20%)
Query: 84 VIIVVEDVADLWALERSKAVNALYHVLGGS-----LSPLDR-IGPEDIGIQSLIER---- 133
+++VE A +E+ +HVL L P D + P++ S
Sbjct: 2 QLVIVESPAKAKTIEKYLG--GDFHVLASYGHIRDLPPKDGSVDPDNGFAMSWENYGDKG 59
Query: 134 -------IEVKKIRELIFAISATIEGQTTAHYIMDKL---KGIDVKITRL 173
E KK LI A EG+ + ++ + L K + K+ R+
Sbjct: 60 KQLKAIADEAKKATRLILATDPDREGEAISWHVQEVLRAKKALPQKVDRV 109
>gi|91793239|ref|YP_562890.1| Holliday junction DNA helicase RuvA [Shewanella denitrificans
OS217]
gi|122968746|sp|Q12N09|RUVA_SHEDO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|91715241|gb|ABE55167.1| Holliday junction DNA helicase RuvA [Shewanella denitrificans
OS217]
Length = 203
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
I L ++PG G ++A R V+ +++L L ++ N
Sbjct: 107 IVTLVKLPGVGKKTAERLV---VEMRDKLKSLLEASVGNERE 145
>gi|239628227|ref|ZP_04671258.1| holliday junction DNA helicase RuvA [Clostridiales bacterium
1_7_47_FAA]
gi|239518373|gb|EEQ58239.1| holliday junction DNA helicase RuvA [Clostridiales bacterium
1_7_47FAA]
Length = 209
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K LA+ PG G ++A+R L L
Sbjct: 107 VKALAKAPGIGNKTAQRLILDL 128
>gi|332361197|gb|EGJ39001.1| DNA topoisomerase TopA [Streptococcus sanguinis SK1056]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|332360879|gb|EGJ38685.1| DNA topoisomerase TopA [Streptococcus sanguinis SK49]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|332360456|gb|EGJ38267.1| DNA topoisomerase TopA [Streptococcus sanguinis SK355]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|328946302|gb|EGG40446.1| DNA topoisomerase TopA [Streptococcus sanguinis SK1087]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|327474222|gb|EGF19629.1| DNA topoisomerase TopA [Streptococcus sanguinis SK408]
gi|327489689|gb|EGF21480.1| DNA topoisomerase TopA [Streptococcus sanguinis SK1058]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|327470030|gb|EGF15494.1| DNA topoisomerase TopA [Streptococcus sanguinis SK330]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|327462202|gb|EGF08529.1| DNA topoisomerase TopA [Streptococcus sanguinis SK1]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|327460349|gb|EGF06686.1| DNA topoisomerase TopA [Streptococcus sanguinis SK1057]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|325696510|gb|EGD38400.1| DNA topoisomerase TopA [Streptococcus sanguinis SK160]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|325694497|gb|EGD36406.1| DNA topoisomerase TopA [Streptococcus sanguinis SK150]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|325689698|gb|EGD31702.1| DNA topoisomerase TopA [Streptococcus sanguinis SK115]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|325687466|gb|EGD29487.1| DNA topoisomerase TopA [Streptococcus sanguinis SK72]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|324994467|gb|EGC26380.1| DNA topoisomerase TopA [Streptococcus sanguinis SK678]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|324992896|gb|EGC24816.1| DNA topoisomerase TopA [Streptococcus sanguinis SK405]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|324991146|gb|EGC23080.1| DNA topoisomerase TopA [Streptococcus sanguinis SK353]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|323351565|ref|ZP_08087219.1| DNA topoisomerase TopA [Streptococcus sanguinis VMC66]
gi|322122051|gb|EFX93777.1| DNA topoisomerase TopA [Streptococcus sanguinis VMC66]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|322385532|ref|ZP_08059176.1| DNA topoisomerase TopA [Streptococcus cristatus ATCC 51100]
gi|321270270|gb|EFX53186.1| DNA topoisomerase TopA [Streptococcus cristatus ATCC 51100]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|318605500|emb|CBY26998.1| holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 205
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|145631439|ref|ZP_01787209.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae R3021]
gi|144982976|gb|EDJ90485.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae R3021]
Length = 204
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|125718006|ref|YP_001035139.1| DNA topoisomerase I [Streptococcus sanguinis SK36]
gi|125497923|gb|ABN44589.1| DNA topoisomerase I, putative [Streptococcus sanguinis SK36]
Length = 697
Score = 36.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQ--- 128
+++VE A +E+ Y VL + + P+ I I+
Sbjct: 18 LVIVESPAKAKTIEK---YLGRNYKVLASVGHIRDLKKSTMSIDFENNYEPQYINIRGKG 74
Query: 129 SLIE--RIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
LI + E KK +++ A EG+ + ++ L
Sbjct: 75 PLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHIL 111
>gi|71279553|ref|YP_268842.1| Holliday junction DNA helicase RuvA [Colwellia psychrerythraea 34H]
gi|90134812|sp|Q483C5|RUVA_COLP3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|71145293|gb|AAZ25766.1| Holliday junction DNA helicase RuvA [Colwellia psychrerythraea 34H]
Length = 211
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
I + +IPG G ++A R L++ ++
Sbjct: 107 ISAIVKIPGVGKKTAERL---LIEMRD 130
>gi|16272267|ref|NP_438479.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae Rd
KW20]
gi|260581219|ref|ZP_05849038.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae RdAW]
gi|1173330|sp|P44632|RUVA_HAEIN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|1573280|gb|AAC21976.1| Holliday junction DNA helicase (ruvA) [Haemophilus influenzae Rd
KW20]
gi|260092144|gb|EEW76088.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae RdAW]
Length = 204
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|309972527|gb|ADO95728.1| Holliday junction resolvasome, DNA-binding subunit [Haemophilus
influenzae R2846]
Length = 204
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|296132699|ref|YP_003639946.1| Holliday junction DNA helicase RuvA [Thermincola sp. JR]
gi|296031277|gb|ADG82045.1| Holliday junction DNA helicase RuvA [Thermincola potens JR]
Length = 200
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ +L ++PG G ++A+R L L
Sbjct: 108 VGVLTQVPGIGKKTAQRMILEL 129
>gi|114047572|ref|YP_738122.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-7]
gi|117920401|ref|YP_869593.1| Holliday junction DNA helicase RuvA [Shewanella sp. ANA-3]
gi|123326531|sp|Q0HUZ0|RUVA_SHESR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166200264|sp|A0KWL8|RUVA_SHESA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|113889014|gb|ABI43065.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-7]
gi|117612733|gb|ABK48187.1| Holliday junction DNA helicase RuvA [Shewanella sp. ANA-3]
Length = 205
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|46143844|ref|ZP_00133975.2| COG0632: Holliday junction resolvasome, DNA-binding subunit
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207771|ref|YP_001052996.1| Holliday junction DNA helicase RuvA [Actinobacillus
pleuropneumoniae L20]
gi|303252521|ref|ZP_07338684.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307247270|ref|ZP_07529319.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249498|ref|ZP_07531486.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307256311|ref|ZP_07538094.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307260744|ref|ZP_07542433.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166229626|sp|A3MZ05|RUVA_ACTP2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|126096563|gb|ABN73391.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|302648489|gb|EFL78682.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306856243|gb|EFM88397.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858491|gb|EFM90559.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306865137|gb|EFM97037.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306869583|gb|EFN01371.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 201
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M +EN + LA++ PG G ++A R
Sbjct: 93 MSVSQFANAVEN--EELAKLTKIPGIGRKTAERL 124
>gi|332161518|ref|YP_004298095.1| Holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665748|gb|ADZ42392.1| Holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860793|emb|CBX71080.1| holliday junction ATP-dependent DNA helicase ruvA [Yersinia
enterocolitica W22703]
Length = 205
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L ++PG G ++A R
Sbjct: 107 ITTLVKLPGVGKKTAERLV 125
>gi|284929265|ref|YP_003421787.1| Holliday junction DNA helicase subunit RuvA [cyanobacterium UCYN-A]
gi|284809709|gb|ADB95406.1| Holliday junction DNA helicase, RuvA subunit [cyanobacterium
UCYN-A]
Length = 213
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 13/58 (22%)
Query: 11 ENLIKI--------LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60
E LIK L+ PG G ++A R L L L L EA I ++ C
Sbjct: 102 EKLIKAVCSGNVKMLSESPGVGKKTAERIILEL----NSKLLKLIEAF-EIKVELHSC 154
>gi|113970239|ref|YP_734032.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-4]
gi|123029678|sp|Q0HIZ2|RUVA_SHESM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|113884923|gb|ABI38975.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-4]
Length = 205
Score = 36.5 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|237746839|ref|ZP_04577319.1| holliday junction DNA helicase subunit RuvA [Oxalobacter formigenes
HOxBLS]
gi|229378190|gb|EEO28281.1| holliday junction DNA helicase subunit RuvA [Oxalobacter formigenes
HOxBLS]
Length = 193
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHL 35
M + + ++ L RIPG G ++A R L L
Sbjct: 98 MAQAVALQDATRL----TRIPGIGKKTAERLLLEL 128
>gi|24373977|ref|NP_718020.1| Holliday junction DNA helicase RuvA [Shewanella oneidensis MR-1]
gi|38372487|sp|Q8EEF2|RUVA_SHEON RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|24348428|gb|AAN55464.1|AE015684_1 Holliday junction DNA helicase RuvA [Shewanella oneidensis MR-1]
Length = 205
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|293390518|ref|ZP_06634852.1| holliday junction DNA helicase RuvA [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951052|gb|EFE01171.1| holliday junction DNA helicase RuvA [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 204
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+R+ PG G ++A R
Sbjct: 93 MSVDEFAYAIER--EELSRLVKIPGIGKKTAERL 124
>gi|319775819|ref|YP_004138307.1| holliday junction DNA helicase RuvA [Haemophilus influenzae F3047]
gi|317450410|emb|CBY86626.1| holliday junction DNA helicase RuvA [Haemophilus influenzae F3047]
Length = 204
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|261868502|ref|YP_003256424.1| Holliday junction DNA helicase RuvA [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413834|gb|ACX83205.1| holliday junction DNA helicase RuvA [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 204
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+R+ PG G ++A R
Sbjct: 93 MSVDEFAYAIER--EELSRLVKIPGIGKKTAERL 124
>gi|148825408|ref|YP_001290161.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae PittEE]
gi|229846401|ref|ZP_04466509.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 7P49H1]
gi|166230556|sp|A5UAH7|RUVA_HAEIE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|148715568|gb|ABQ97778.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittEE]
gi|229810494|gb|EEP46212.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae 7P49H1]
Length = 204
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|187479251|ref|YP_787276.1| Holliday junction DNA helicase RuvA [Bordetella avium 197N]
gi|123765963|sp|Q2KVY6|RUVA_BORA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|115423838|emb|CAJ50389.1| holliday junction DNA helicase [Bordetella avium 197N]
Length = 190
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
++ E+ I + L R+PG G ++A R L++ + +L +
Sbjct: 93 MSVAELAQAITLQESGRLTRVPGIGKKTAERL---LLEMRGKLGADIGAT 139
>gi|15602842|ref|NP_245914.1| Holliday junction DNA helicase motor protein [Pasteurella multocida
subsp. multocida str. Pm70]
gi|13431841|sp|P57893|RUVA_PASMU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|12721303|gb|AAK03061.1| RuvA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 204
Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEEFAYAIER--EELSKLVKIPGVGKKTAERL 124
>gi|325579043|ref|ZP_08148999.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus
parainfluenzae ATCC 33392]
gi|325159278|gb|EGC71412.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus
parainfluenzae ATCC 33392]
Length = 203
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLVKIPGVGKKTAERL 124
>gi|305662582|ref|YP_003858870.1| RNA-binding protein Nop10p [Ignisphaera aggregans DSM 17230]
gi|304377151|gb|ADM26990.1| RNA-binding protein Nop10p [Ignisphaera aggregans DSM 17230]
Length = 57
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 8/23 (34%)
Query: 58 CLCSICGNVDTTDPCAICIDQQR 80
C IC D C IC R
Sbjct: 6 RKCPICNRYTLKDLCPICKAPTR 28
>gi|313901534|ref|ZP_07834979.1| ATP-dependent DNA helicase RecG [Thermaerobacter subterraneus DSM
13965]
gi|313468195|gb|EFR63664.1| ATP-dependent DNA helicase RecG [Thermaerobacter subterraneus DSM
13965]
Length = 930
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 17 LARIPGFGPRSARRAT 32
L R+PG G R A+R
Sbjct: 219 LGRLPGVGRRQAQRLA 234
>gi|294651065|ref|ZP_06728403.1| crossover junction crossover junction ATP-dependent DNA helicase
RuvA [Acinetobacter haemolyticus ATCC 19194]
gi|292823044|gb|EFF81909.1| crossover junction crossover junction ATP-dependent DNA helicase
RuvA [Acinetobacter haemolyticus ATCC 19194]
Length = 201
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59
I L ++PG G ++A R + L + + L ++
Sbjct: 106 INTLIKVPGVGKKTAERLMIELRDRFKALAHSTGSTTNAAAAQIQF 151
>gi|145634688|ref|ZP_01790397.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittAA]
gi|145638774|ref|ZP_01794383.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittII]
gi|148827465|ref|YP_001292218.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae PittGG]
gi|260582589|ref|ZP_05850379.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae NT127]
gi|166230557|sp|A5UGC9|RUVA_HAEIG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|145268233|gb|EDK08228.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittAA]
gi|145272369|gb|EDK12277.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittII]
gi|148718707|gb|ABQ99834.1| Holliday junction DNA helicase motor protein [Haemophilus
influenzae PittGG]
gi|260094400|gb|EEW78298.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae NT127]
gi|301169022|emb|CBW28619.1| component of RuvABC resolvasome, regulatory subunit [Haemophilus
influenzae 10810]
gi|309750264|gb|ADO80248.1| Holliday junction resolvasome, DNA-binding subunit [Haemophilus
influenzae R2866]
Length = 204
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|331694279|ref|YP_004330518.1| DNA topoisomerase I [Pseudonocardia dioxanivorans CB1190]
gi|326948968|gb|AEA22665.1| DNA topoisomerase I [Pseudonocardia dioxanivorans CB1190]
Length = 952
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 111 GGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG 165
PL + PE G S + R +K + EL+ A EG+ A +++D LK
Sbjct: 97 DNEFQPLYIVTPEKKGKVSEL-RDALKSVDELLLATDPDREGEAIAWHLLDTLKP 150
>gi|312136604|ref|YP_004003941.1| toprim domain protein [Methanothermus fervidus DSM 2088]
gi|311224323|gb|ADP77179.1| TOPRIM domain protein [Methanothermus fervidus DSM 2088]
Length = 273
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 86 IVVEDVADLWALERSKAVNAL---YHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIREL 142
I+VE +D+ + ++ + +L YHV S+ P + + +R +
Sbjct: 11 IIVEGASDVETISKALQMISLGSEYHVTISSIIPTTSV--------EIAQRAVEGADI-V 61
Query: 143 IFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197
+ A G+ A LK + R+ +P G +++Y+D + + I++
Sbjct: 62 LIATDVDPTGRELAKKFEKSLKDHVGHVERIK--LPYGHDVEYIDSDLLKKEIKN 114
>gi|257456050|ref|ZP_05621253.1| holliday junction DNA helicase RuvA [Treponema vincentii ATCC
35580]
gi|257446508|gb|EEV21548.1| holliday junction DNA helicase RuvA [Treponema vincentii ATCC
35580]
Length = 202
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L IPG G ++A++ L L
Sbjct: 107 VARLQSIPGIGKKTAQKMVLAL 128
>gi|256810699|ref|YP_003128068.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
gi|256793899|gb|ACV24568.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
Length = 303
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 51 ANIYNKVCLCSICGNVDTTDPCAICI 76
++ +V C ICG + D C +C
Sbjct: 270 IDVKEEVKKCKICGYPCSGDICKVCS 295
>gi|117928551|ref|YP_873102.1| Holliday junction DNA helicase subunit RuvA [Acidothermus
cellulolyticus 11B]
gi|166229623|sp|A0LUK6|RUVA_ACIC1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|117649014|gb|ABK53116.1| Holliday junction DNA helicase subunit RuvA [Acidothermus
cellulolyticus 11B]
Length = 196
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
+K LA +PG G ++A+R L L K A A
Sbjct: 106 VKALALVPGIGRKTAQRIILEL--KDRLGTPSTAAA 139
>gi|126174263|ref|YP_001050412.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS155]
gi|153000824|ref|YP_001366505.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS185]
gi|160875532|ref|YP_001554848.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS195]
gi|217973219|ref|YP_002357970.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS223]
gi|304408864|ref|ZP_07390485.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS183]
gi|307302867|ref|ZP_07582622.1| Holliday junction DNA helicase RuvA [Shewanella baltica BA175]
gi|166200260|sp|A3D480|RUVA_SHEB5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166200261|sp|A6WNQ3|RUVA_SHEB8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045769|sp|A9L3H8|RUVA_SHEB9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254767386|sp|B8EA74|RUVA_SHEB2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|125997468|gb|ABN61543.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS155]
gi|151365442|gb|ABS08442.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS185]
gi|160861054|gb|ABX49588.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS195]
gi|217498354|gb|ACK46547.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS223]
gi|304352685|gb|EFM17082.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS183]
gi|306913227|gb|EFN43649.1| Holliday junction DNA helicase RuvA [Shewanella baltica BA175]
gi|315267720|gb|ADT94573.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS678]
Length = 205
Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|120598878|ref|YP_963452.1| Holliday junction DNA helicase RuvA [Shewanella sp. W3-18-1]
gi|146293036|ref|YP_001183460.1| Holliday junction DNA helicase RuvA [Shewanella putrefaciens CN-32]
gi|166200263|sp|A4Y6S8|RUVA_SHEPC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166200265|sp|A1RJQ3|RUVA_SHESW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|120558971|gb|ABM24898.1| Holliday junction DNA helicase RuvA [Shewanella sp. W3-18-1]
gi|145564726|gb|ABP75661.1| Holliday junction DNA helicase RuvA [Shewanella putrefaciens CN-32]
gi|319426434|gb|ADV54508.1| Holliday junction DNA helicase RuvA [Shewanella putrefaciens 200]
Length = 205
Score = 36.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R LV+ L L EA
Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEM-RDKLKSLMEA 138
>gi|329123663|ref|ZP_08252223.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus
aegyptius ATCC 11116]
gi|327469862|gb|EGF15327.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus
aegyptius ATCC 11116]
Length = 204
Score = 36.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|319896645|ref|YP_004134838.1| holliday junction DNA helicase ruva [Haemophilus influenzae F3031]
gi|317432147|emb|CBY80498.1| holliday junction DNA helicase RuvA [Haemophilus influenzae F3031]
Length = 204
Score = 36.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|68248920|ref|YP_248032.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae
86-028NP]
gi|81336669|sp|Q4QNM5|RUVA_HAEI8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|68057119|gb|AAX87372.1| holliday junction DNA helicase RuvA [Haemophilus influenzae
86-028NP]
Length = 204
Score = 36.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M + IE + L+++ PG G ++A R
Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124
>gi|150401058|ref|YP_001324824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
gi|150013761|gb|ABR56212.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
Length = 357
Score = 36.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M K +I N I L ++PG G ++A
Sbjct: 102 MVKNNYNGKIPNDINELVKLPGVGRKTA 129
>gi|332685820|ref|YP_004455594.1| holliday junction DNA helicase RuvA [Melissococcus plutonius ATCC
35311]
gi|332369829|dbj|BAK20785.1| holliday junction DNA helicase RuvA [Melissococcus plutonius ATCC
35311]
Length = 201
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 14/56 (25%)
Query: 17 LARIPGFGPRSARRATLHL------VKKKEQLLGPLA--------EAMANIYNKVC 58
L + PG G ++A++ L L ++ + + +A+ +C
Sbjct: 109 LTKFPGVGKKTAQQMVLDLKGKLDELEMTPTAVKAMTNQPKVKTNQALNEALEALC 164
>gi|307822050|ref|ZP_07652282.1| helix-hairpin-helix DNA-binding, class 1 [Methylobacter
tundripaludum SV96]
gi|307736616|gb|EFO07461.1| helix-hairpin-helix DNA-binding, class 1 [Methylobacter
tundripaludum SV96]
Length = 297
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 13/56 (23%)
Query: 1 MQKKITGKEIENL------IKILARIPGFGPRSARRA--TLHLVKKKEQLLGPLAE 48
M +++ +E+L I + +IPG GPRSA R TLH+ LA
Sbjct: 76 MTGRMS--RLESLQSGHDPIALFEQIPGIGPRSAHRIIETLHI---DTLEALELAA 126
>gi|282855630|ref|ZP_06264944.1| holliday junction ATP-dependent DNA helicase RuvA [Pyramidobacter
piscolens W5455]
gi|282586560|gb|EFB91814.1| holliday junction ATP-dependent DNA helicase RuvA [Pyramidobacter
piscolens W5455]
Length = 203
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I++L +PG G ++A R L
Sbjct: 106 IRLLTSVPGIGKKTAERICFEL 127
>gi|254431586|ref|ZP_05045289.1| Holliday junction DNA helicase RuvA [Cyanobium sp. PCC 7001]
gi|197626039|gb|EDY38598.1| Holliday junction DNA helicase RuvA [Cyanobium sp. PCC 7001]
Length = 214
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Query: 9 EIENLIKI-----LARI---PGFGPRSARRATLHL 35
E+E L++ L R+ PG G R+A R + L
Sbjct: 98 EMEELVQAIVQPDLRRLCQAPGVGKRTAERLAVEL 132
>gi|311279238|ref|YP_003941469.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae SCF1]
gi|308748433|gb|ADO48185.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae SCF1]
Length = 203
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40
++ + N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAAQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 130
>gi|227875448|ref|ZP_03993589.1| Holliday junction DNA helicase motor protein [Mobiluncus mulieris
ATCC 35243]
gi|269977300|ref|ZP_06184273.1| holliday junction DNA helicase RuvA [Mobiluncus mulieris 28-1]
gi|306818760|ref|ZP_07452482.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
mulieris ATCC 35239]
gi|307701010|ref|ZP_07638035.1| Holliday junction DNA helicase RuvA [Mobiluncus mulieris FB024-16]
gi|227844002|gb|EEJ54170.1| Holliday junction DNA helicase motor protein [Mobiluncus mulieris
ATCC 35243]
gi|269934603|gb|EEZ91164.1| holliday junction DNA helicase RuvA [Mobiluncus mulieris 28-1]
gi|304648446|gb|EFM45749.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
mulieris ATCC 35239]
gi|307614005|gb|EFN93249.1| Holliday junction DNA helicase RuvA [Mobiluncus mulieris FB024-16]
Length = 193
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G +SA R +L +
Sbjct: 109 LQRIPGVGKKSAERMSLEI 127
>gi|119477229|ref|ZP_01617465.1| Holliday junction DNA helicase motor protein [marine gamma
proteobacterium HTCC2143]
gi|119449592|gb|EAW30830.1| Holliday junction DNA helicase motor protein [marine gamma
proteobacterium HTCC2143]
Length = 202
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKE 40
L R+PG G ++A R LV+ K+
Sbjct: 109 SLVRLPGVGKKTAERL---LVEMKD 130
>gi|77919931|ref|YP_357746.1| Holliday junction DNA helicase RuvA [Pelobacter carbinolicus DSM
2380]
gi|90135490|sp|Q3A231|RUVA_PELCD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|77546014|gb|ABA89576.1| Holliday junction DNA helicase subunit RuvA [Pelobacter
carbinolicus DSM 2380]
Length = 197
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 15 KILARIPGFGPRSARRATLHL 35
K LA +PG G ++A R L L
Sbjct: 107 KHLATVPGIGKKTAERLVLEL 127
>gi|22298075|ref|NP_681322.1| Holliday junction DNA helicase motor protein [Thermosynechococcus
elongatus BP-1]
gi|34222868|sp|Q8DLG1|RUVA_THEEB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|22294253|dbj|BAC08084.1| Holliday junction DNA helicase [Thermosynechococcus elongatus BP-1]
Length = 210
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 8/35 (22%)
Query: 9 EIENLIKI--------LARIPGFGPRSARRATLHL 35
+ L++ L+R PG G ++A R L L
Sbjct: 99 PLPELVQAIVSGNTRRLSRAPGVGHKTAERIALEL 133
>gi|328947934|ref|YP_004365271.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema
succinifaciens DSM 2489]
gi|328448258|gb|AEB13974.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema
succinifaciens DSM 2489]
Length = 206
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L ++PG GP++A + L L
Sbjct: 107 VDALKKVPGVGPKTAGKIILSL 128
>gi|315634723|ref|ZP_07890007.1| crossover junction ATP-dependent DNA helicase RuvA [Aggregatibacter
segnis ATCC 33393]
gi|315476671|gb|EFU67419.1| crossover junction ATP-dependent DNA helicase RuvA [Aggregatibacter
segnis ATCC 33393]
Length = 204
Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+++ PG G ++A R
Sbjct: 93 MSVDEFAYAIER--EELSKLVKIPGVGKKTAERL 124
>gi|319946374|ref|ZP_08020612.1| DNA helicase RecG [Streptococcus australis ATCC 700641]
gi|319747527|gb|EFV99782.1| DNA helicase RecG [Streptococcus australis ATCC 700641]
Length = 671
Score = 36.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 12 NLIKILARIPGFGPRSARRA 31
NL + L+ +PG GP+SA +
Sbjct: 2 NLHQSLSVLPGIGPKSAEKY 21
>gi|254490165|ref|ZP_05103356.1| Holliday junction DNA helicase RuvA [Methylophaga thiooxidans
DMS010]
gi|224464651|gb|EEF80909.1| Holliday junction DNA helicase RuvA [Methylophaga thiooxydans
DMS010]
Length = 198
Score = 36.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50
L R+PG G ++A R +V+ L ++ AM
Sbjct: 109 SLTRLPGVGKKTAERL---IVEM-RDRLKEVSSAM 139
>gi|30248236|ref|NP_840306.1| Holliday junction DNA helicase subunit [Nitrosomonas europaea ATCC
19718]
gi|44888448|sp|Q820S3|RUVA_NITEU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|30180121|emb|CAD84123.1| probable Holliday junction DNA helicase subunit [Nitrosomonas
europaea ATCC 19718]
Length = 195
Score = 36.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G ++A R L L
Sbjct: 110 LTRIPGIGKKTAERLLLEL 128
>gi|161506974|ref|YP_001576928.1| Holliday junction DNA helicase RuvA [Lactobacillus helveticus DPC
4571]
gi|172048184|sp|A8YTI1|RUVA_LACH4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|160347963|gb|ABX26637.1| Holliday junction DNA helicase [Lactobacillus helveticus DPC 4571]
Length = 196
Score = 36.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 15/62 (24%)
Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL----------VKKKEQLLGPLAEAMA 51
+ I+ L R PG G ++A + L L + ++++ G ++ A+
Sbjct: 92 ANSLAEAIEQGEVKYLTRFPGVGKKTASQIVLDLKGKLRDYVARLDRQDEEQGNISPALN 151
Query: 52 NI 53
+
Sbjct: 152 DA 153
>gi|34556867|ref|NP_906682.1| Holliday junction DNA helicase RuvA [Wolinella succinogenes DSM
1740]
gi|44888365|sp|Q7MA70|RUVA_WOLSU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|34482582|emb|CAE09582.1| PUTATIVE HOLLIDAY JUNCTION DNA HELICASE [Wolinella succinogenes]
Length = 189
Score = 36.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRA 31
T +I+ L R+PG GP+SA R
Sbjct: 91 YTPPTFAQIIQAQDVKALQRVPGIGPKSAGRI 122
>gi|94499176|ref|ZP_01305714.1| DNA polymerase IV [Oceanobacter sp. RED65]
gi|94428808|gb|EAT13780.1| DNA polymerase IV [Oceanobacter sp. RED65]
Length = 366
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 7 GKEIENLIKIL--ARIPGFGPRSARRAT 32
+ + ++ L +IPG GP+SA +
Sbjct: 163 PQALNEFVRTLPVGKIPGVGPKSAEKLA 190
>gi|291165807|gb|EFE27855.1| holliday junction DNA helicase RuvA [Filifactor alocis ATCC 35896]
Length = 198
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I+ L+++ G G ++A R L L
Sbjct: 106 IEKLSKVSGVGKKTAERIVLEL 127
>gi|289641361|ref|ZP_06473526.1| Holliday junction DNA helicase RuvA [Frankia symbiont of Datisca
glomerata]
gi|289508823|gb|EFD29757.1| Holliday junction DNA helicase RuvA [Frankia symbiont of Datisca
glomerata]
Length = 264
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G + A+R L L
Sbjct: 108 ALTKVPGIGRKGAQRIVLDL 127
>gi|195171953|ref|XP_002026766.1| GL26998 [Drosophila persimilis]
gi|194111705|gb|EDW33748.1| GL26998 [Drosophila persimilis]
Length = 728
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLL--GPLAE 48
++ L ++PG GP++A LV ++ +L LA+
Sbjct: 673 VRELQKLPGIGPKTA----FALVMQRSRLGGFQSLAQ 705
>gi|302866772|ref|YP_003835409.1| Holliday junction DNA helicase RuvA [Micromonospora aurantiaca ATCC
27029]
gi|315503187|ref|YP_004082074.1| holliday junction DNA helicase ruva [Micromonospora sp. L5]
gi|302569631|gb|ADL45833.1| Holliday junction DNA helicase RuvA [Micromonospora aurantiaca ATCC
27029]
gi|315409806|gb|ADU07923.1| Holliday junction DNA helicase RuvA [Micromonospora sp. L5]
Length = 200
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L R+PG G + A R L L
Sbjct: 108 ALTRVPGIGKKGAERLVLEL 127
>gi|240949538|ref|ZP_04753878.1| Holliday junction DNA helicase RuvA [Actinobacillus minor NM305]
gi|240296111|gb|EER46772.1| Holliday junction DNA helicase RuvA [Actinobacillus minor NM305]
Length = 200
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M +EN + LA++ PG G ++A R
Sbjct: 93 MSVSQFANAVEN--EELAKLTKIPGIGRKTAERL 124
>gi|269103018|ref|ZP_06155715.1| holliday junction DNA helicase RuvA [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162916|gb|EEZ41412.1| holliday junction DNA helicase RuvA [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 187
Score = 36.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40
I L +IPG G ++A R LV+ K+
Sbjct: 87 ITTLVKIPGVGKKTAERL---LVEMKD 110
>gi|153854394|ref|ZP_01995672.1| hypothetical protein DORLON_01667 [Dorea longicatena DSM 13814]
gi|149752920|gb|EDM62851.1| hypothetical protein DORLON_01667 [Dorea longicatena DSM 13814]
Length = 673
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 21/109 (19%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVL---GGSLSPLD----RIGPEDIGIQSLIERIEVK 137
+++VE A + + K +V+ G + + I E+ I
Sbjct: 9 LVIVESPAKVKTI---KKFLGSNYVVTASNGHVRDMPKSQMGIDIENDYEPKYITIRGKG 65
Query: 138 KI-----------RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
+I ++ A EG+ + ++ LK D K R+++
Sbjct: 66 EILAKLRKEVKKADKIYLATDPDREGEAISWHLSKALKLEDKKFYRISF 114
>gi|317488242|ref|ZP_07946810.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325830754|ref|ZP_08164138.1| endonuclease III [Eggerthella sp. HGA1]
gi|316912654|gb|EFV34195.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325487161|gb|EGC89604.1| endonuclease III [Eggerthella sp. HGA1]
Length = 220
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M G EI I L ++PG G ++A
Sbjct: 103 MVVADYGGEIPRDIDELQKLPGVGRKTA 130
>gi|257791041|ref|YP_003181647.1| endonuclease III [Eggerthella lenta DSM 2243]
gi|257474938|gb|ACV55258.1| endonuclease III [Eggerthella lenta DSM 2243]
Length = 220
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M G EI I L ++PG G ++A
Sbjct: 103 MVVADYGGEIPRDIDELQKLPGVGRKTA 130
>gi|146095595|ref|XP_001467619.1| mutt/nudix family protein-like protein [Leishmania infantum JPCM5]
gi|134071984|emb|CAM70683.1| mutt/nudix family protein-like protein [Leishmania infantum JPCM5]
Length = 325
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 25/90 (27%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKK--KEQLLGPLAEAMANIYNKVC 58
M + G+ + LI ++ G H+++ EQ LA ++ +
Sbjct: 96 MADNLAGRRLSQLIWAPSK-DG-----------HVLEMARPEQAAYGLAMSLVRWHASNR 143
Query: 59 LCSICGNVDTTDPCAICIDQQRD--ASVII 86
C+ CG D RD S +
Sbjct: 144 FCANCGTAT---------DPTRDVGFSRLC 164
>gi|33152771|ref|NP_874124.1| Holliday junction DNA helicase motor protein [Haemophilus ducreyi
35000HP]
gi|38372436|sp|Q7VKV4|RUVA_HAEDU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|33148995|gb|AAP96513.1| Holliday junction DNA helicase RuvA [Haemophilus ducreyi 35000HP]
Length = 201
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Query: 11 ENLIKILARIPGFGPRSARRA 31
E L+K L +IPG G ++A R
Sbjct: 105 EELVK-LTKIPGVGRKTAERL 124
>gi|295107016|emb|CBL04559.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Gordonibacter pamelaeae 7-10-1-b]
Length = 220
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 6 TGKEIENLIKILARIPGFGPRSA 28
G EI I L ++PG G ++A
Sbjct: 108 YGGEIPRDIDELQKLPGVGRKTA 130
>gi|210610053|ref|ZP_03288232.1| hypothetical protein CLONEX_00418 [Clostridium nexile DSM 1787]
gi|210152664|gb|EEA83670.1| hypothetical protein CLONEX_00418 [Clostridium nexile DSM 1787]
Length = 694
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 21/109 (19%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVL---GGSLSPLD----RIGPEDIGIQSLIERIEVK 137
+++VE A + + K +V+ G + L I E I
Sbjct: 5 LVIVESPAKVKTI---KKFLGSNYVVTASNGHVRDLPKSQLGIDVEHDFEPKYITIRGKG 61
Query: 138 KI-----------RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
I ++ A EG+ A ++ LK D K+ R+++
Sbjct: 62 DILANLRKEVKKADKVYLATDPDREGEAIAWHLSKALKLEDKKMYRISF 110
>gi|198467365|ref|XP_001354375.2| GA14585 [Drosophila pseudoobscura pseudoobscura]
gi|198149210|gb|EAL31428.2| GA14585 [Drosophila pseudoobscura pseudoobscura]
Length = 748
Score = 36.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLL--GPLAE 48
++ L ++PG GP++A LV ++ +L LA+
Sbjct: 693 VRELQKLPGIGPKTA----FALVMQRSRLGGFQSLAQ 725
>gi|146306303|ref|YP_001186768.1| Holliday junction DNA helicase motor protein [Pseudomonas mendocina
ymp]
gi|145574504|gb|ABP84036.1| Holliday junction DNA helicase subunit RuvA [Pseudomonas mendocina
ymp]
Length = 202
Score = 36.1 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L ++PG G ++A R
Sbjct: 91 MSGLEVDELVRCVQAQDTAALTKVPGVGKKTAERL 125
>gi|82703833|ref|YP_413399.1| Holliday junction DNA helicase RuvA [Nitrosospira multiformis ATCC
25196]
gi|123740585|sp|Q2Y5G4|RUVA_NITMU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|82411898|gb|ABB76007.1| Holliday junction DNA helicase subunit RuvA [Nitrosospira
multiformis ATCC 25196]
Length = 197
Score = 36.1 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHL 35
+ ++ ++ LI RIPG G ++A R L L
Sbjct: 100 QTVSNQDPARLI----RIPGIGKKTAERLLLEL 128
>gi|320352803|ref|YP_004194142.1| Holliday junction DNA helicase RuvA [Desulfobulbus propionicus DSM
2032]
gi|320121305|gb|ADW16851.1| Holliday junction DNA helicase RuvA [Desulfobulbus propionicus DSM
2032]
Length = 208
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRA 31
IT K++ L +PG G ++A+R
Sbjct: 102 ITAKDLSQLTA----LPGVGKKTAQRL 124
>gi|53804471|ref|YP_113686.1| Holliday junction DNA helicase RuvA [Methylococcus capsulatus str.
Bath]
gi|81682299|sp|Q609L1|RUVA_METCA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|53758232|gb|AAU92523.1| Holliday junction DNA helicase RuvA [Methylococcus capsulatus str.
Bath]
Length = 201
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
L R+PG G ++A R + L + + + LA A
Sbjct: 110 LVRLPGIGKKTAERLIIELRDRLDIGVPSLAPA 142
>gi|325267123|ref|ZP_08133791.1| crossover junction ATP-dependent DNA helicase RuvA [Kingella
denitrificans ATCC 33394]
gi|324981361|gb|EGC17005.1| crossover junction ATP-dependent DNA helicase RuvA [Kingella
denitrificans ATCC 33394]
Length = 194
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
++ E+ + L+ +PG G ++A R L L
Sbjct: 91 SALSSDELAQAVAQEDVKRLSSVPGIGKKTAERMILEL 128
>gi|312877002|ref|ZP_07736976.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796233|gb|EFR12588.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 303
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 54 YNKVCLCSICGNVDTTDPCAICI 76
++ CSICG V TT+ C+ C
Sbjct: 270 KLELRECSICGQVTTTEVCSFCR 292
>gi|289523150|ref|ZP_06440004.1| holliday junction DNA helicase RuvA [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503693|gb|EFD24857.1| holliday junction DNA helicase RuvA [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 196
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 11 ENLIKILARIPGFGPRSARRATLHL 35
E ++ L ++PG G ++A R L
Sbjct: 103 EKNLEKLEKVPGVGRKTAERICFEL 127
>gi|259417974|ref|ZP_05741893.1| holliday junction DNA helicase RuvA [Silicibacter sp. TrichCH4B]
gi|259346880|gb|EEW58694.1| holliday junction DNA helicase RuvA [Silicibacter sp. TrichCH4B]
Length = 229
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
G GP++A+R L L K K + + +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPSVMAMGGTITEALE 147
>gi|198413061|ref|XP_002124717.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 183
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M K+ G +I ++ L ++PG GP+ A
Sbjct: 69 MMKEEFGGDIPKCVESLVKLPGVGPKMA 96
>gi|85859217|ref|YP_461419.1| DNA topoisomerase I [Syntrophus aciditrophicus SB]
gi|85722308|gb|ABC77251.1| DNA topoisomerase I [Syntrophus aciditrophicus SB]
Length = 769
Score = 35.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 21/107 (19%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGS------------LSPLDRIGPEDIGIQSLI 131
+I+VE + L K Y VL + P + P I
Sbjct: 5 LIIVESPTKVKTL---KKYLGADYEVLASKGHIKDLPKKTLGIDPQNEFQPTYSVIDDKK 61
Query: 132 ERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+ I K + + A EG+ A +I +++K + +I R+
Sbjct: 62 KVIADLKKAAKNVSRIFLAPDPDREGEAIAWHIAEEIKAKNKEIYRV 108
>gi|317050666|ref|YP_004111782.1| putative transposase [Desulfurispirillum indicum S5]
gi|316945750|gb|ADU65226.1| putative transposase [Desulfurispirillum indicum S5]
Length = 343
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66
++I+ LI + PG G + R + L+ + LA N+ ++ C N
Sbjct: 137 PQDIQELINPVH--PGLGRFT-PRLSYFLLDEGRVSAEELAGEDTNLVRELIKLEFCSNP 193
Query: 67 DTTDPC 72
C
Sbjct: 194 AEIRQC 199
>gi|255263783|ref|ZP_05343125.1| holliday junction DNA helicase RuvA [Thalassiobium sp. R2A62]
gi|255106118|gb|EET48792.1| holliday junction DNA helicase RuvA [Thalassiobium sp. R2A62]
Length = 220
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
G GP++A+RA L L K K + + +A +V
Sbjct: 115 GVGPKTAQRAVLDL-KNKAHAVMAMGGTLAEAQGEV 149
>gi|284032305|ref|YP_003382236.1| Holliday junction DNA helicase RuvA [Kribbella flavida DSM 17836]
gi|283811598|gb|ADB33437.1| Holliday junction DNA helicase RuvA [Kribbella flavida DSM 17836]
Length = 199
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHL 35
+ + +++ L+ ++PG G + A+R L L
Sbjct: 99 QAVASEDLAMLV----KVPGIGKKGAQRVVLEL 127
>gi|226952125|ref|ZP_03822589.1| Holliday junction helicase, subunit A [Acinetobacter sp. ATCC
27244]
gi|226837134|gb|EEH69517.1| Holliday junction helicase, subunit A [Acinetobacter sp. ATCC
27244]
Length = 201
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R + L LA +
Sbjct: 106 INTLIKVPGVGKKTAERLMIEL----RDRFKALANS 137
>gi|302879788|ref|YP_003848352.1| Holliday junction DNA helicase RuvA [Gallionella capsiferriformans
ES-2]
gi|302582577|gb|ADL56588.1| Holliday junction DNA helicase RuvA [Gallionella capsiferriformans
ES-2]
Length = 193
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
++G + +L L +IPG G ++A R L L
Sbjct: 90 LSGLSLNDLADAVANKEAGRLTKIPGVGKKTAERLLLEL 128
>gi|157164589|ref|YP_001466908.1| holliday junction DNA helicase RuvA [Campylobacter concisus 13826]
gi|166230532|sp|A7ZDQ0|RUVA_CAMC1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|112800289|gb|EAT97633.1| holliday junction DNA helicase RuvA [Campylobacter concisus 13826]
Length = 184
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRA 31
++ + N I +PG GP++ARR
Sbjct: 91 SSLSSQAFTNAIISGDADTFKSVPGIGPKTARRI 124
>gi|87118957|ref|ZP_01074855.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MED121]
gi|86165348|gb|EAQ66615.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MED121]
Length = 199
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 14 IKILARIPGFGPRSARRA 31
+ L RIPG G ++A R
Sbjct: 107 VTALTRIPGVGKKTAERL 124
>gi|238063870|ref|ZP_04608579.1| Holliday junction DNA helicase subunit ruvA [Micromonospora sp.
ATCC 39149]
gi|237885681|gb|EEP74509.1| Holliday junction DNA helicase subunit ruvA [Micromonospora sp.
ATCC 39149]
Length = 200
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L R+PG G + A R L L
Sbjct: 108 ALTRVPGIGKKGAERLVLEL 127
>gi|313904087|ref|ZP_07837467.1| Holliday junction DNA helicase RuvA [Eubacterium cellulosolvens 6]
gi|313471236|gb|EFR66558.1| Holliday junction DNA helicase RuvA [Eubacterium cellulosolvens 6]
Length = 203
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 16 ILARIPGFGPRSARRATLHL---VKKKEQLLGPLAE 48
+A+ PG G ++A++A L L K + LA
Sbjct: 109 AIAKAPGIGKKTAQKAVLELKDKFKLDDAFEKKLAH 144
>gi|330466911|ref|YP_004404654.1| Holliday junction DNA helicase RuvA [Verrucosispora maris
AB-18-032]
gi|328809882|gb|AEB44054.1| Holliday junction DNA helicase RuvA [Verrucosispora maris
AB-18-032]
Length = 200
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L R+PG G + A R L L
Sbjct: 108 ALTRVPGIGKKGAERLVLEL 127
>gi|330506959|ref|YP_004383387.1| DNA topoisomerase I [Methanosaeta concilii GP-6]
gi|328927767|gb|AEB67569.1| DNA topoisomerase I [Methanosaeta concilii GP-6]
Length = 766
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52
LAR+PG GP++ + +K +L G A+++A
Sbjct: 709 DGLARLPGIGPKTLEKLASAGIKTSGELAGANAKSLAA 746
>gi|312792431|ref|YP_004025354.1| PP-loop domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179571|gb|ADQ39741.1| PP-loop domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 303
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 54 YNKVCLCSICGNVDTTDPCAICI 76
++ CSICG V TT+ C+ C
Sbjct: 270 KLELRECSICGQVTTTEVCSFCR 292
>gi|312134203|ref|YP_004001541.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
gi|311774254|gb|ADQ03741.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
Length = 303
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 54 YNKVCLCSICGNVDTTDPCAICI 76
++ CSICG V TTD C+ C
Sbjct: 270 KVELKECSICGQVTTTDVCSFCR 292
>gi|225181939|ref|ZP_03735373.1| Holliday junction DNA helicase RuvA [Dethiobacter alkaliphilus AHT
1]
gi|225167379|gb|EEG76196.1| Holliday junction DNA helicase RuvA [Dethiobacter alkaliphilus AHT
1]
Length = 200
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 14 IKILARIPGFGPRSARRA 31
+K L R+PG GP+SA+R
Sbjct: 107 VKALTRVPGVGPKSAKRL 124
>gi|225572217|ref|ZP_03781081.1| hypothetical protein RUMHYD_00511 [Blautia hydrogenotrophica DSM
10507]
gi|225040279|gb|EEG50525.1| hypothetical protein RUMHYD_00511 [Blautia hydrogenotrophica DSM
10507]
Length = 201
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
IK +++ PG G ++A++ L L
Sbjct: 107 IKTISKAPGIGRKTAQKLVLEL 128
>gi|219871499|ref|YP_002475874.1| holliday junction DNA helicase motor protein [Haemophilus
parasuis SH0165]
gi|219691703|gb|ACL32926.1| holliday junction DNA helicase motor protein [Haemophilus
parasuis SH0165]
Length = 171
Score = 35.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 8 KEIENLIKILARIPGFGPRSARRA 31
+E+ LI +IPG G ++A R
Sbjct: 74 EELAKLI----KIPGIGRKTAERL 93
>gi|312128625|ref|YP_003993499.1| PP-loop domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311778644|gb|ADQ08130.1| PP-loop domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 303
Score = 35.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 54 YNKVCLCSICGNVDTTDPCAICI 76
++ CSICG V TT+ C+ C
Sbjct: 270 KLELKECSICGQVTTTEVCSFCR 292
>gi|302870896|ref|YP_003839532.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302573755|gb|ADL41546.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 303
Score = 35.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 54 YNKVCLCSICGNVDTTDPCAICI 76
++ CSICG V TTD C+ C
Sbjct: 270 KVELKECSICGQVTTTDVCSFCR 292
>gi|299135919|ref|ZP_07029103.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX8]
gi|298602043|gb|EFI58197.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX8]
Length = 198
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 8/33 (24%)
Query: 11 ENLIKI--------LARIPGFGPRSARRATLHL 35
E L+ L +IPG G ++A R L L
Sbjct: 96 ERLVGAIRAGDHATLTKIPGIGKKTAERVVLEL 128
>gi|296132584|ref|YP_003639831.1| DEAD/DEAH box helicase domain protein [Thermincola sp. JR]
gi|296031162|gb|ADG81930.1| DEAD/DEAH box helicase domain protein [Thermincola potens JR]
Length = 856
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 41 QLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80
L A + YN V CS C N + C C+D R
Sbjct: 680 AALDNFARLLELTYNTVANCSNCNNNPEQNGCINCVDANR 719
>gi|264680422|ref|YP_003280332.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni CNB-2]
gi|262210938|gb|ACY35036.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni CNB-2]
Length = 191
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
++G I++L L ++PG G ++A R L L
Sbjct: 90 LSGMSIDDLADAVSQQQAGRLVKVPGIGKKTAERLLLEL 128
>gi|189211409|ref|XP_001942035.1| calcium-transporting ATPase 1 (Golgi Ca(2+)-ATPase) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978128|gb|EDU44754.1| calcium-transporting ATPase 1 (Golgi Ca(2+)-ATPase) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 924
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 102 AVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMD 161
L V G + D P G++ I R+ K++ ++ T + +TTA I
Sbjct: 651 QYRGL--VFAGLVGMND---PPRKGVERAIRRLMAGKVKVIMI----TGDAETTAVAIGK 701
Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAI 195
L + + + G ELD + + + +AI
Sbjct: 702 SLGMPITANSAIGRSVIRGDELDRMSEEELAQAI 735
>gi|282892421|ref|ZP_06300771.1| hypothetical protein pah_c253o048 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281497823|gb|EFB40184.1| hypothetical protein pah_c253o048 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 200
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 14 IKILARIPGFGPRSARRA 31
I L+++PG G ++A R
Sbjct: 107 ITTLSKVPGVGKKTAERL 124
>gi|56460194|ref|YP_155475.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina
loihiensis L2TR]
gi|81363131|sp|Q5QYU4|RUVA_IDILO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|56179204|gb|AAV81926.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina
loihiensis L2TR]
Length = 205
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L ++PG G ++A R
Sbjct: 107 VTRLVKLPGVGKKTAERLV 125
>gi|269956459|ref|YP_003326248.1| Holliday junction DNA helicase RuvA [Xylanimonas cellulosilytica
DSM 15894]
gi|269305140|gb|ACZ30690.1| Holliday junction DNA helicase RuvA [Xylanimonas cellulosilytica
DSM 15894]
Length = 207
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L R+PG GP+ A+R L L
Sbjct: 106 VKALTRVPGIGPKVAQRILLEL 127
>gi|147920839|ref|YP_685354.1| putative DNA-directed RNA polymerase, subunit E2 [uncultured
methanogenic archaeon RC-I]
gi|110620750|emb|CAJ36028.1| putative DNA-directed RNA polymerase, subunit E2 [uncultured
methanogenic archaeon RC-I]
Length = 75
Score = 35.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 51 ANIYNKVCLCSICGNVDTTDPCAICID 77
+ + C C N+ D C +C
Sbjct: 11 RKAGSNLKACRQCHNLLEGDVCPVCQS 37
>gi|326335639|ref|ZP_08201826.1| DNA topoisomerase TopA [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692405|gb|EGD34357.1| DNA topoisomerase TopA [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 839
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 21/107 (19%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGSLSPLD------------RIGPEDI---GIQ 128
+++VE A +E+ Y VL D P + +
Sbjct: 5 LVIVESPAKAKTIEK---FLGNDYKVLSSYGHIADLPDKELGVDVQHGFKPHYLISSDKK 61
Query: 129 SLIERIEVK--KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+L++ ++ + K+ + A EG+ A ++ ++LK K R+
Sbjct: 62 TLVKTLKEEVKKVDTVWLASDEDREGEAIAWHLAEELKLPKEKTKRI 108
>gi|301155728|emb|CBW15196.1| component of RuvABC resolvasome, regulatory subunit [Haemophilus
parainfluenzae T3T1]
Length = 203
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+++ PG G ++A R
Sbjct: 93 MSVDQFAYAIER--EELSKLVKIPGVGKKTAERL 124
>gi|256811229|ref|YP_003128598.1| TOPRIM domain protein [Methanocaldococcus fervens AG86]
gi|256794429|gb|ACV25098.1| TOPRIM domain protein [Methanocaldococcus fervens AG86]
Length = 128
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
I+VE D+ +LE+ + V+ P + L+ K I+E+I
Sbjct: 26 IIVEGKRDVESLEKLGI-EGTFIVI--------SKTPVYLIADELVR----KGIKEVILL 72
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKI-TRLAY 175
G+ A I+++ + +K+ T+L +
Sbjct: 73 TDFDRRGRLLAKAIVEEFRHRGIKVNTKLRH 103
>gi|167856020|ref|ZP_02478765.1| holliday junction ATP-dependent DNA helicase RuvA [Haemophilus
parasuis 29755]
gi|167852859|gb|EDS24128.1| holliday junction ATP-dependent DNA helicase RuvA [Haemophilus
parasuis 29755]
Length = 202
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 8 KEIENLIKILARIPGFGPRSARRA 31
+E+ LI +IPG G ++A R
Sbjct: 105 EELAKLI----KIPGIGRKTAERL 124
>gi|291612984|ref|YP_003523141.1| Holliday junction DNA helicase RuvA [Sideroxydans lithotrophicus
ES-1]
gi|291583096|gb|ADE10754.1| Holliday junction DNA helicase RuvA [Sideroxydans lithotrophicus
ES-1]
Length = 192
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G ++A R L L
Sbjct: 110 LTRIPGVGKKTAERLLLEL 128
>gi|291301298|ref|YP_003512576.1| Holliday junction DNA helicase RuvA [Stackebrandtia nassauensis DSM
44728]
gi|290570518|gb|ADD43483.1| Holliday junction DNA helicase RuvA [Stackebrandtia nassauensis DSM
44728]
Length = 200
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G + A R L L
Sbjct: 109 LTRIPGVGKKGAERLVLEL 127
>gi|299533018|ref|ZP_07046405.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni S44]
gi|298719242|gb|EFI60212.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni S44]
Length = 191
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
++G I++L L ++PG G ++A R L L
Sbjct: 90 LSGMSIDDLADAVSQQQAGRLVKVPGIGKKTAERLLLEL 128
>gi|300770096|ref|ZP_07079975.1| crossover junction ATP-dependent DNA helicase RuvA
[Sphingobacterium spiritivorum ATCC 33861]
gi|300762572|gb|EFK59389.1| crossover junction ATP-dependent DNA helicase RuvA
[Sphingobacterium spiritivorum ATCC 33861]
Length = 194
Score = 35.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
IT +EI++ I ++ +I G GP++A+R L L
Sbjct: 90 SSITPEEIQSAIINGQVAVIQKIKGIGPKTAQRLILEL 127
>gi|330907286|ref|XP_003295773.1| hypothetical protein PTT_02780 [Pyrenophora teres f. teres 0-1]
gi|311332666|gb|EFQ96133.1| hypothetical protein PTT_02780 [Pyrenophora teres f. teres 0-1]
Length = 992
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 102 AVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMD 161
L V G + D P G++ I R+ K++ ++ T + +TTA I
Sbjct: 651 QYRGL--VFAGLVGMND---PPRKGVERAIRRLMAGKVKVIMI----TGDAETTAVAIGK 701
Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAI 195
L + + + G ELD + + + +AI
Sbjct: 702 SLGMPITANSAIGRSVIRGDELDRMSEEELAQAI 735
>gi|221064959|ref|ZP_03541064.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni KF-1]
gi|220709982|gb|EED65350.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni KF-1]
Length = 191
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
++G I++L L ++PG G ++A R L L
Sbjct: 90 LSGMSIDDLADAVSQQQAGRLVKVPGIGKKTAERLLLEL 128
>gi|159027980|emb|CAO87940.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 209
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 10 IENLI--------KILARIPGFGPRSARRATLHL 35
IE L+ KIL++ PG G ++A R L L
Sbjct: 101 IEELVVAIVTGNTKILSKTPGVGLKTAERIALEL 134
>gi|309355547|emb|CAP38612.2| hypothetical protein CBG_21956 [Caenorhabditis briggsae AF16]
Length = 579
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 19/115 (16%)
Query: 76 IDQQRDASVI---IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132
+ R S+I + V V + A+ER VL GS+ + +
Sbjct: 57 ANDSRQKSIIFAQLAVLSVNSIRAVERVWDYRGEMFVLHGSIRNNRKKITVRVFEDGKER 116
Query: 133 RIEVKKIRELIFAIS---ATIEGQ---TTA---------HYIMDKLKGIDVKITR 172
+ K++ + A + I G TTA HYI + ++ I ITR
Sbjct: 117 FVMNKELVDAFIASGFPCSPIGGDYCYTTAMRDVYREYKHYIQN-IEFIRYPITR 170
>gi|81427980|ref|YP_394979.1| Holliday junction DNA helicase RuvA [Lactobacillus sakei subsp.
sakei 23K]
gi|90135183|sp|Q38YR0|RUVA_LACSS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|78609621|emb|CAI54667.1| Holliday junction DNA helicase RuvA [Lactobacillus sakei subsp.
sakei 23K]
Length = 203
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L + PG G ++A++ L L
Sbjct: 106 IGYLTKFPGVGKKTAQQIALDL 127
>gi|89094837|ref|ZP_01167770.1| Holliday junction DNA helicase RuvA [Oceanospirillum sp. MED92]
gi|89080892|gb|EAR60131.1| Holliday junction DNA helicase RuvA [Oceanospirillum sp. MED92]
Length = 210
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQ 41
L ++PG G ++A R +V+ K++
Sbjct: 109 SLIKLPGVGKKTAERL---IVEMKDK 131
>gi|295101169|emb|CBK98714.1| Predicted DNA-binding protein with the Helix-hairpin-helix motif
[Faecalibacterium prausnitzii L2-6]
Length = 452
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLA----EAMANIYNKVCLCSICGNVD 67
++L R+PG GP+SARR + + L L + + + + C
Sbjct: 334 EMLLRVPGIGPKSARRI------RDARRLSALGLDELKRIGVVLKRAQYFITCRGFS 384
>gi|283769122|ref|ZP_06342027.1| Holliday junction DNA helicase RuvA [Bulleidia extructa W1219]
gi|283104308|gb|EFC05686.1| Holliday junction DNA helicase RuvA [Bulleidia extructa W1219]
Length = 192
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
M +K I I L ++PG G +SA + L L
Sbjct: 86 MLQKSGYALITEAISKGDVAALKKLPGIGAKSASQIVLDL 125
>gi|158336024|ref|YP_001517198.1| Holliday junction DNA helicase RuvA [Acaryochloris marina
MBIC11017]
gi|189045739|sp|B0CAE7|RUVA_ACAM1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|158306265|gb|ABW27882.1| holliday junction DNA helicase RuvA [Acaryochloris marina
MBIC11017]
Length = 208
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 8/34 (23%)
Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35
+++L++ L + PG G ++A R L L
Sbjct: 100 LQDLVQAIVNSNTKMLVKTPGVGAKTAERIALEL 133
>gi|83647602|ref|YP_436037.1| Holliday junction DNA helicase RuvA [Hahella chejuensis KCTC 2396]
gi|123739873|sp|Q2SCL2|RUVA_HAHCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|83635645|gb|ABC31612.1| Holliday junction DNA helicase RuvA [Hahella chejuensis KCTC 2396]
Length = 204
Score = 35.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 10/44 (22%)
Query: 3 KKITGKEI------ENLIKILARIPGFGPRSARRATLHLVKKKE 40
++ E +NL + L ++PG G ++A R L++ ++
Sbjct: 91 SHMSPNEFVECVRGDNLTR-LTKMPGVGKKTAERL---LIEMRD 130
>gi|283853683|ref|ZP_06370914.1| Holliday junction DNA helicase RuvA [Desulfovibrio sp. FW1012B]
gi|283570924|gb|EFC18953.1| Holliday junction DNA helicase RuvA [Desulfovibrio sp. FW1012B]
Length = 201
Score = 35.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRA 31
+ T +++ ++ L R+PG G +SA+R
Sbjct: 92 SRFTTEDLLRIVATGDADALVRVPGIGKKSAQRI 125
>gi|289548999|ref|YP_003473987.1| DNA topoisomerase I [Thermocrinis albus DSM 14484]
gi|289182616|gb|ADC89860.1| DNA topoisomerase I [Thermocrinis albus DSM 14484]
Length = 539
Score = 35.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173
+K + EG+ A+++ + LK + K+ R+
Sbjct: 69 AQKCESIYIGTDPDREGEAIAYFLWNLLKPLGKKLYRV 106
>gi|288923988|ref|ZP_06418058.1| DNA recombination protein RuvA domain I [Frankia sp. EUN1f]
gi|288344666|gb|EFC79125.1| DNA recombination protein RuvA domain I [Frankia sp. EUN1f]
Length = 217
Score = 35.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G + A+R L L
Sbjct: 108 ALTKVPGIGRKGAQRIVLDL 127
>gi|160902900|ref|YP_001568481.1| helix-hairpin-helix DNA-binding motif-containing protein [Petrotoga
mobilis SJ95]
gi|254767380|sp|A9BIJ5|RUVA_PETMO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|160360544|gb|ABX32158.1| helix-hairpin-helix motif [Petrotoga mobilis SJ95]
Length = 190
Score = 35.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 16 ILARIPGFGPRSARRA 31
+L+ +PG G ++A R
Sbjct: 108 LLSSLPGIGKKTAERL 123
>gi|213421561|ref|ZP_03354627.1| Holliday junction DNA helicase motor protein [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 105
Score = 35.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKE 40
E L L ++PG G ++A R +V+ K+
Sbjct: 7 EEL-GALVKLPGIGKKTAERL---IVEMKD 32
>gi|167629941|ref|YP_001680440.1| transposase, is116/is110/is902 family, putative [Heliobacterium
modesticaldum Ice1]
gi|167592681|gb|ABZ84429.1| transposase, is116/is110/is902 family, putative [Heliobacterium
modesticaldum Ice1]
Length = 338
Score = 35.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
E LI++L IPG G R+A HL+ + + +A
Sbjct: 175 EELIQLLDTIPGVGRRTAE----HLLGEVGLDMSRFPDA 209
>gi|42527369|ref|NP_972467.1| Holliday junction DNA helicase RuvA [Treponema denticola ATCC
35405]
gi|81411982|sp|Q73LJ9|RUVA_TREDE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|41817954|gb|AAS12378.1| Holliday junction DNA helicase RuvA [Treponema denticola ATCC
35405]
Length = 201
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ +E ++ L + PG G ++A++ L L
Sbjct: 93 LNSSSLEKALEEGDLDTLQKAPGVGKKTAQKMILAL 128
>gi|300088237|ref|YP_003758759.1| Holliday junction DNA helicase RuvA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527970|gb|ADJ26438.1| Holliday junction DNA helicase RuvA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 195
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
+++ N+I +L +PG G ++A R L L K+++ + A
Sbjct: 92 FKPEDLANIIATGNADMLCTVPGVGKKTASRIVLEL---KDKVARNWSAA 138
>gi|284041624|ref|YP_003391964.1| NAD(+) diphosphatase [Conexibacter woesei DSM 14684]
gi|283945845|gb|ADB48589.1| NAD(+) diphosphatase [Conexibacter woesei DSM 14684]
Length = 307
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
Query: 14 IKILARI-PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP- 71
I L + PG P S R L+ L A A+ N + C+ CG V
Sbjct: 89 IHALRPLAPGARPLS-LREAGALLPHHLGGLAAYASALLNWHRVHGHCARCGAVTDVAEG 147
Query: 72 -----CAICI---DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116
C +C + D VI++V D + ++ Y L G +
Sbjct: 148 GHMRRCPVCGAEHHPRTDPVVIMLVLDGERVLLGRQAAWPAGRYSALAGFVEA 200
>gi|227538550|ref|ZP_03968599.1| crossover junction endodeoxyribonuclease [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241469|gb|EEI91484.1| crossover junction endodeoxyribonuclease [Sphingobacterium
spiritivorum ATCC 33300]
Length = 194
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
IT +EI++ I ++ +I G GP++A+R L L
Sbjct: 90 SSITPEEIQSAIINGQVAVIQKIKGIGPKTAQRLILEL 127
>gi|169824416|ref|YP_001692027.1| endonuclease III [Finegoldia magna ATCC 29328]
gi|302380577|ref|ZP_07269042.1| endonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|167831221|dbj|BAG08137.1| endonuclease III [Finegoldia magna ATCC 29328]
gi|302311520|gb|EFK93536.1| endonuclease III [Finegoldia magna ACS-171-V-Col3]
Length = 208
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 14 IKILARIPGFGPRSA 28
I+ L ++PG G ++A
Sbjct: 108 IEELMKLPGVGRKTA 122
>gi|117618729|ref|YP_855686.1| DNA polymerase IV [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|189027655|sp|A0KHD5|DPO4_AERHH RecName: Full=DNA polymerase IV; Short=Pol IV
gi|117560136|gb|ABK37084.1| DNA polymerase IV [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 350
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 5 ITGKEIENLIKIL--ARIPGFGPRSARRA 31
I +E++ ++ L ++PG G ++A R
Sbjct: 164 IRPQEVDEFVRQLPLGKLPGIGRKTADRL 192
>gi|149277483|ref|ZP_01883624.1| Holliday junction DNA helicase [Pedobacter sp. BAL39]
gi|149231716|gb|EDM37094.1| Holliday junction DNA helicase [Pedobacter sp. BAL39]
Length = 194
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKK-KEQLLGPLAEA 49
M IT EI+ I ++ RI G G +SA+R L L K K++ G L A
Sbjct: 88 MLSSITPIEIQTAIVNGDLPLIQRIKGIGAKSAQRLVLELQDKLKKEGSGSLIAA 142
>gi|83594686|ref|YP_428438.1| transcriptional regulator Ada / DNA-3-methyladenine glycosylase II
/ DNA-O6-methylguanine--protein-cysteine
S-methyltransferase [Rhodospirillum rubrum ATCC 11170]
gi|83577600|gb|ABC24151.1| Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II
/ DNA-O6-methylguanine--protein-cysteine
S-methyltransferase [Rhodospirillum rubrum ATCC 11170]
Length = 486
Score = 35.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 6 TGKEIENLIKILARIPGFGPRSARRATL 33
G ++++ + L R+PG GP +A+ L
Sbjct: 405 PGPDLDSAVARLCRLPGIGPWTAQYIAL 432
>gi|303233806|ref|ZP_07320460.1| endonuclease III [Finegoldia magna BVS033A4]
gi|302495240|gb|EFL54992.1| endonuclease III [Finegoldia magna BVS033A4]
Length = 208
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 14 IKILARIPGFGPRSA 28
I+ L ++PG G ++A
Sbjct: 108 IEELMKLPGVGRKTA 122
>gi|52306819|gb|AAU37319.1| RuvA protein [Mannheimia succiniciproducens MBEL55E]
Length = 215
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE+ + L+++ PG G ++A R
Sbjct: 104 MSVNEFAYAIEH--EELSKLVKIPGVGKKTAERL 135
>gi|240173173|ref|ZP_04751831.1| Holliday junction DNA helicase RuvA [Mycobacterium kansasii ATCC
12478]
Length = 195
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VAALTRVPGIGKRGAERMVLEL 127
>gi|298529992|ref|ZP_07017394.1| Holliday junction DNA helicase RuvA [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509366|gb|EFI33270.1| Holliday junction DNA helicase RuvA [Desulfonatronospira
thiodismutans ASO3-1]
Length = 203
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35
+ +I+ +I L ++PG G ++ARR L L
Sbjct: 94 FSPSQIQKIINTEDEAALTQVPGIGSKTARRLILDL 129
>gi|159044059|ref|YP_001532853.1| ATP-dependent DNA helicase RecG [Dinoroseobacter shibae DFL 12]
gi|157911819|gb|ABV93252.1| ATP-dependent DNA helicase [Dinoroseobacter shibae DFL 12]
Length = 696
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 13 LIKILARIPGFGPRSARRATLHL-VKKKEQLLGPL 46
L L +PG G ++A+ H+ + + L+ L
Sbjct: 11 LFAELETLPGIGKKTAQTLA-HMDIARPRDLIFTL 44
>gi|33594301|ref|NP_881945.1| Holliday junction DNA helicase motor protein [Bordetella pertussis
Tohama I]
gi|33602977|ref|NP_890537.1| Holliday junction DNA helicase motor protein [Bordetella
bronchiseptica RB50]
gi|44888431|sp|Q7VTT9|RUVA_BORPE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|44888438|sp|Q7WGB6|RUVA_BORBR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|33564376|emb|CAE43681.1| holliday junction DNA helicase [Bordetella pertussis Tohama I]
gi|33568608|emb|CAE34366.1| holliday junction DNA helicase [Bordetella bronchiseptica RB50]
gi|332383712|gb|AEE68559.1| Holliday junction DNA helicase RuvA [Bordetella pertussis CS]
Length = 190
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
L R+PG G ++A R L++ + +L +
Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGAT 139
>gi|312792987|ref|YP_004025910.1| Radical SAM domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180127|gb|ADQ40297.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 415
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SA+R H + + L + +
Sbjct: 320 EELIRVPGIGIKSAKRIIKNRVFHSL--DFEDLKKIGVVLKRAK 361
>gi|295399354|ref|ZP_06809336.1| Holliday junction DNA helicase RuvA [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110086|ref|YP_003988402.1| Holliday junction DNA helicase RuvA [Geobacillus sp. Y4.1MC1]
gi|294978820|gb|EFG54416.1| Holliday junction DNA helicase RuvA [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215187|gb|ADP73791.1| Holliday junction DNA helicase RuvA [Geobacillus sp. Y4.1MC1]
Length = 199
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 23/70 (32%)
Query: 11 ENLIKI--------LARIPGFGPRSARRATLHL--------------VKKKEQLLGPLAE 48
E L++ L + PG G ++AR+ L L + E+ L+
Sbjct: 95 EQLVEAIEQENETFLCKFPGVGKKTARQMILDLKGKLTAVAARTYPDLFHPEEEPSHLS- 153
Query: 49 AMANIYNKVC 58
A+ +
Sbjct: 154 ALEEAIEALK 163
>gi|163815611|ref|ZP_02206984.1| hypothetical protein COPEUT_01786 [Coprococcus eutactus ATCC 27759]
gi|158449248|gb|EDP26243.1| hypothetical protein COPEUT_01786 [Coprococcus eutactus ATCC 27759]
Length = 516
Score = 35.7 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 15 KILARIPGFGPRSARRAT 32
+L RIPG GP+SA R
Sbjct: 417 DLLLRIPGIGPKSAARIV 434
>gi|166363769|ref|YP_001656042.1| Holliday junction DNA helicase RuvA [Microcystis aeruginosa
NIES-843]
gi|189045757|sp|B0JRV0|RUVA_MICAN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166086142|dbj|BAG00850.1| holliday junction DNA helicase [Microcystis aeruginosa NIES-843]
Length = 209
Score = 35.7 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 10 IENLI--------KILARIPGFGPRSARRATLHL 35
IE L+ KIL++ PG G ++A R L L
Sbjct: 101 IEELVVAIVTGNTKILSKTPGVGLKTAERIALEL 134
>gi|258645438|ref|ZP_05732907.1| holliday junction DNA helicase RuvA [Dialister invisus DSM 15470]
gi|260402789|gb|EEW96336.1| holliday junction DNA helicase RuvA [Dialister invisus DSM 15470]
Length = 201
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 17 LARIPGFGPRSARRA 31
L ++PG G ++A R
Sbjct: 109 LTKLPGVGKKTAERL 123
>gi|16330186|ref|NP_440914.1| Holliday junction DNA helicase RuvA [Synechocystis sp. PCC 6803]
gi|3122847|sp|P73554|RUVA_SYNY3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|1652674|dbj|BAA17594.1| Holliday junction DNA helicase; RuvA [Synechocystis sp. PCC 6803]
Length = 211
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L + PG G + A R L L
Sbjct: 113 VKQLCQTPGVGKKGAERLALEL 134
>gi|260912903|ref|ZP_05919388.1| crossover junction endoribonuclease subunit A [Pasteurella dagmatis
ATCC 43325]
gi|260632893|gb|EEX51059.1| crossover junction endoribonuclease subunit A [Pasteurella dagmatis
ATCC 43325]
Length = 204
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE + L+++ PG G ++A R
Sbjct: 93 MSVNEFVYAIER--EELSKLVKIPGVGKKTAERL 124
>gi|256375340|ref|YP_003099000.1| competence protein ComEA helix-hairpin-helix repeat protein
[Actinosynnema mirum DSM 43827]
gi|255919643|gb|ACU35154.1| competence protein ComEA helix-hairpin-helix repeat protein
[Actinosynnema mirum DSM 43827]
Length = 242
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 14 IKILARIPGFGPRSARRATLH 34
++ L +PG GP +A+R H
Sbjct: 189 VEQLDALPGVGPVTAQRIVDH 209
>gi|222087212|ref|YP_002545747.1| endonuclease III [Agrobacterium radiobacter K84]
gi|221724660|gb|ACM27816.1| endonuclease III [Agrobacterium radiobacter K84]
Length = 259
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 34/126 (26%), Gaps = 45/126 (35%)
Query: 15 KILARIPGFGPRSAR-------------------RATLHLV----KKKEQLLGPLAEAMA 51
+ L +PG G ++A R L+ K +++ L + +
Sbjct: 138 EELMTLPGVGRKTANVVMSMAFGHATLAVDTHVFRIANRLLLAPGKTPDEVEQRLMKVIP 197
Query: 52 NIYNKVCL----------CSICGNVDTTDPCAIC--IDQQRDASVII-----VVEDVADL 94
+ Y C C C D R I +VE +
Sbjct: 198 DQYLYHAHHWLILHGRYVCK-----ARKPECERCVIADLCRSPEKICDVPAPLVELPQQM 252
Query: 95 WALERS 100
A E +
Sbjct: 253 IAAETA 258
>gi|218262453|ref|ZP_03476919.1| hypothetical protein PRABACTJOHN_02597 [Parabacteroides johnsonii
DSM 18315]
gi|218223383|gb|EEC96033.1| hypothetical protein PRABACTJOHN_02597 [Parabacteroides johnsonii
DSM 18315]
Length = 214
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 IKILARIPGFGPRSA 28
I L ++PG G ++A
Sbjct: 109 IDELQKLPGVGRKTA 123
>gi|154493703|ref|ZP_02033023.1| hypothetical protein PARMER_03044 [Parabacteroides merdae ATCC
43184]
gi|154086913|gb|EDN85958.1| hypothetical protein PARMER_03044 [Parabacteroides merdae ATCC
43184]
Length = 214
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 IKILARIPGFGPRSA 28
I L ++PG G ++A
Sbjct: 109 IDELQKLPGVGRKTA 123
>gi|111222763|ref|YP_713557.1| putative Fe4-S4 ferredoxin [Frankia alni ACN14a]
gi|111150295|emb|CAJ61992.1| putative Fe4-S4 ferredoxin [Frankia alni ACN14a]
Length = 526
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
PG GP+ HLV L +A+ CS C NV
Sbjct: 295 PGDGPK-----AFHLVLLDNGRTAALGDAVGRDALHCIRCSACLNVC 336
>gi|15838502|ref|NP_299190.1| Holliday junction DNA helicase RuvA [Xylella fastidiosa 9a5c]
gi|20455272|sp|Q9PC77|RUVA_XYLFA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|9106999|gb|AAF84710.1|AE004010_7 holliday junction binding protein, DNA helicase [Xylella fastidiosa
9a5c]
Length = 194
Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 14 IKILARIPGFGPRSARRA 31
+ L IPG G ++A R
Sbjct: 107 VNALTVIPGIGKKTAERM 124
>gi|319795920|ref|YP_004157560.1| holliday junction DNA helicase ruva [Variovorax paradoxus EPS]
gi|315598383|gb|ADU39449.1| Holliday junction DNA helicase RuvA [Variovorax paradoxus EPS]
Length = 190
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARR 30
+ IT +E+ L+ +IPG G ++A R
Sbjct: 99 SQAITTQELGRLV----KIPGIGKKTAER 123
>gi|222529905|ref|YP_002573787.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456752|gb|ACM61014.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 415
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G +SA+R H + + L + +
Sbjct: 320 EQLIRVPGIGIKSAKRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361
>gi|161510997|ref|YP_087904.2| Holliday junction DNA helicase motor protein [Mannheimia
succiniciproducens MBEL55E]
gi|88941980|sp|Q65UP1|RUVA_MANSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
Length = 204
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M IE+ + L+++ PG G ++A R
Sbjct: 93 MSVNEFAYAIEH--EELSKLVKIPGVGKKTAERL 124
>gi|254000106|ref|YP_003052169.1| Holliday junction DNA helicase RuvA [Methylovorus sp. SIP3-4]
gi|253986785|gb|ACT51642.1| Holliday junction DNA helicase RuvA [Methylovorus sp. SIP3-4]
Length = 192
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
+L R+PG G ++A R L L K + + L
Sbjct: 109 LLTRVPGIGKKTAERLLLEL--KDKFSVDGLTA 139
>gi|253578705|ref|ZP_04855976.1| Holliday junction DNA helicase RuvA [Ruminococcus sp. 5_1_39B_FAA]
gi|251849648|gb|EES77607.1| Holliday junction DNA helicase RuvA [Ruminococcus sp. 5_1_39BFAA]
Length = 202
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 14 IKILARIPGFGPRSARRATLHLV-KKKEQLLGPL 46
+K L++ PG G ++A++ L L K K + L
Sbjct: 106 VKTLSKAPGIGKKTAQKLILELKDKMKLEDAFEL 139
>gi|239907719|ref|YP_002954460.1| holliday junction DNA helicase RuvA [Desulfovibrio magneticus RS-1]
gi|259495640|sp|C4XIJ9|RUVA_DESMR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|239797585|dbj|BAH76574.1| holliday junction DNA helicase RuvA [Desulfovibrio magneticus RS-1]
Length = 202
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 15 KILARIPGFGPRSARRA 31
+ L R+PG G +SA+R
Sbjct: 109 EALVRVPGIGKKSAQRI 125
>gi|239817626|ref|YP_002946536.1| Holliday junction DNA helicase RuvA [Variovorax paradoxus S110]
gi|259495659|sp|C5CM11|RUVA_VARPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|239804203|gb|ACS21270.1| Holliday junction DNA helicase RuvA [Variovorax paradoxus S110]
Length = 190
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARR 30
+ IT +E+ L+ +IPG G ++A R
Sbjct: 99 SQAITTQELGRLV----KIPGIGKKTAER 123
>gi|86139156|ref|ZP_01057726.1| Holliday junction DNA helicase RuvA [Roseobacter sp. MED193]
gi|85824000|gb|EAQ44205.1| Holliday junction DNA helicase RuvA [Roseobacter sp. MED193]
Length = 229
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
G GP++A+R L L K K + + ++ +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGSLPDAIE 147
>gi|257465001|ref|ZP_05629372.1| Holliday junction DNA helicase RuvA [Actinobacillus minor 202]
gi|257450661|gb|EEV24704.1| Holliday junction DNA helicase RuvA [Actinobacillus minor 202]
Length = 200
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M +EN + LA++ PG G ++A R
Sbjct: 93 MSVSQFASAVEN--EELAKLTKIPGIGRKTAERL 124
>gi|33598084|ref|NP_885727.1| Holliday junction DNA helicase motor protein [Bordetella
parapertussis 12822]
gi|44888435|sp|Q7W4T9|RUVA_BORPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|33566642|emb|CAE38852.1| holliday junction DNA helicase [Bordetella parapertussis]
Length = 190
Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
L R+PG G ++A R L++ + +L +
Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGAT 139
>gi|332968271|gb|EGK07345.1| crossover junction ATP-dependent DNA helicase RuvA [Kingella kingae
ATCC 23330]
Length = 188
Score = 35.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35
+T E+ I + + R+ PG G ++A R L L
Sbjct: 84 SAMTTDELAQAIANEDVKRLSSAPGIGKKTAERMILEL 121
>gi|292490335|ref|YP_003525774.1| Holliday junction DNA helicase RuvA [Nitrosococcus halophilus Nc4]
gi|291578930|gb|ADE13387.1| Holliday junction DNA helicase RuvA [Nitrosococcus halophilus Nc4]
Length = 199
Score = 35.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 16 ILARIPGFGPRSARRA 31
L R+PG G ++A R
Sbjct: 109 SLTRLPGVGKKTAERL 124
>gi|225023395|ref|ZP_03712587.1| hypothetical protein EIKCOROL_00253 [Eikenella corrodens ATCC
23834]
gi|224943873|gb|EEG25082.1| hypothetical protein EIKCOROL_00253 [Eikenella corrodens ATCC
23834]
Length = 193
Score = 35.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 17 LARIPGFGPRSARRATLHL 35
L+ PG G ++A R L L
Sbjct: 110 LSSAPGIGKKTAERMVLEL 128
>gi|152996211|ref|YP_001341046.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MWYL1]
gi|189045756|sp|A6VXD2|RUVA_MARMS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|150837135|gb|ABR71111.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MWYL1]
Length = 200
Score = 35.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 3 KKITGKEI-----ENLIKILARIPGFGPRSARRA 31
++ +E+ E+ + L RIPG G ++A R
Sbjct: 91 SSMSSEELITNVQESDVTALTRIPGVGKKTAERL 124
>gi|310824622|ref|YP_003956980.1| Competence protein comEA [Stigmatella aurantiaca DW4/3-1]
gi|309397694|gb|ADO75153.1| Competence protein comEA [Stigmatella aurantiaca DW4/3-1]
Length = 112
Score = 35.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 15 KILARIPGFGPRSARRA 31
+ L R+PG G ++A+R
Sbjct: 39 EELDRLPGVGRKAAQRI 55
>gi|218961233|ref|YP_001741008.1| Holliday junction DNA helicase RuvA [Candidatus Cloacamonas
acidaminovorans]
gi|167729890|emb|CAO80802.1| Holliday junction DNA helicase RuvA [Candidatus Cloacamonas
acidaminovorans]
Length = 202
Score = 35.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52
+L R+PG G +SA+R + L + + L +
Sbjct: 112 LLTRVPGIGKKSAQRLIVEL----KDDVHKLLNHIDQ 144
>gi|226324652|ref|ZP_03800170.1| hypothetical protein COPCOM_02437 [Coprococcus comes ATCC 27758]
gi|225207100|gb|EEG89454.1| hypothetical protein COPCOM_02437 [Coprococcus comes ATCC 27758]
Length = 689
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 85 IIVVEDVADLWALERSKAVNALYHVLG---GSLSPLDR----------IGPEDIGIQSLI 131
+++VE + + K +V+ G + L + P+ I I+
Sbjct: 5 LVIVESPTKVKTI---KKFLGSNYVVMASNGHVRDLPKSQMGVDLEHDFEPKYITIRGKG 61
Query: 132 E-----RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175
E R EVKK ++ A EG+ + ++M LK K+ R+++
Sbjct: 62 EILAGLRKEVKKADKIYLATDPDREGEAISWHLMKALKLEGKKVYRISF 110
>gi|73748284|ref|YP_307523.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. CBDB1]
gi|289432333|ref|YP_003462206.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. GT]
gi|90134867|sp|Q3ZZK6|RUVA_DEHSC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|73660000|emb|CAI82607.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. CBDB1]
gi|288946053|gb|ADC73750.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. GT]
Length = 194
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
M + + + + I ++L+ IPG G +++ R L L
Sbjct: 89 MLSVMNAEALASAIISGNAELLSTIPGIGKKTSSRIILEL 128
>gi|294669790|ref|ZP_06734856.1| hypothetical protein NEIELOOT_01690 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308356|gb|EFE49599.1| hypothetical protein NEIELOOT_01690 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 194
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35
+T E+ + + + R+ PG G ++A R L L
Sbjct: 91 SAMTADELAQAVAQEDVKRLSSAPGIGKKTAERMILEL 128
>gi|257440048|ref|ZP_05615803.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
gi|257197400|gb|EEU95684.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
Length = 465
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
++L R+PG GP+SARR H K+ L L + M + + C
Sbjct: 347 EMLLRVPGIGPKSARRI-WHARKQAALGLDEL-KRMGVVLKRAQYFITCRGFA 397
>gi|126737218|ref|ZP_01752953.1| Holliday junction DNA helicase motor protein [Roseobacter sp.
SK209-2-6]
gi|126721803|gb|EBA18506.1| Holliday junction DNA helicase motor protein [Roseobacter sp.
SK209-2-6]
Length = 228
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
G GP++A+R L L K K + + ++A+ +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPAVMAMGGSVADAMDGPG 150
>gi|147669064|ref|YP_001213882.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. BAV1]
gi|146270012|gb|ABQ17004.1| Holliday junction DNA helicase subunit RuvA [Dehalococcoides sp.
BAV1]
Length = 194
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
M + + + + I ++L+ IPG G +++ R L L
Sbjct: 89 MLSVMNAEALASAIISGNAELLSTIPGIGKKTSSRIILEL 128
>gi|257125212|ref|YP_003163326.1| endonuclease III [Leptotrichia buccalis C-1013-b]
gi|257049151|gb|ACV38335.1| endonuclease III [Leptotrichia buccalis C-1013-b]
Length = 219
Score = 35.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28
K I K++E LI+ +PG G ++A
Sbjct: 102 KDIIPKKLEELIE----LPGVGRKTA 123
>gi|300783078|ref|YP_003763369.1| NAD+ diphosphatase [Amycolatopsis mediterranei U32]
gi|299792592|gb|ADJ42967.1| NAD+ diphosphatase [Amycolatopsis mediterranei U32]
Length = 339
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 14/96 (14%)
Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT------TDPCAIC---IDQQRDASVI 85
L+ L A+A+ C+ CG+ C C + D +VI
Sbjct: 128 LLDDTSAGLFTTAQALRFWRRGAKFCTRCGSATELIQFGWASKCTGCGREEYPRTDPAVI 187
Query: 86 IVVEDVADL----WALERSKAVN-ALYHVLGGSLSP 116
+V + L R Y VL G +
Sbjct: 188 CLVHSTEGVNGSHVLLARQPIWPAGRYSVLAGFVEA 223
>gi|291531143|emb|CBK96728.1| endonuclease III [Eubacterium siraeum 70/3]
Length = 212
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M + G EI + I+ L ++PG G ++A
Sbjct: 96 MLRDDFGGEIPDTIEELVKLPGVGRKTA 123
>gi|241895534|ref|ZP_04782830.1| Holliday junction DNA helicase RuvA [Weissella paramesenteroides
ATCC 33313]
gi|241871112|gb|EER74863.1| Holliday junction DNA helicase RuvA [Weissella paramesenteroides
ATCC 33313]
Length = 196
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L + PG G ++A++ L L
Sbjct: 104 IGFLTKFPGIGKKTAQQIVLDL 125
>gi|297588394|ref|ZP_06947037.1| DNA-(apurinic or apyrimidinic site) lyase [Finegoldia magna ATCC
53516]
gi|297573767|gb|EFH92488.1| DNA-(apurinic or apyrimidinic site) lyase [Finegoldia magna ATCC
53516]
Length = 208
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 IKILARIPGFGPRSA 28
I L ++PG G ++A
Sbjct: 108 IDELMKLPGVGRKTA 122
>gi|5263323|gb|AAD41425.1|AC007727_14 Similar to gb|U96710 8-oxoguanine DNA-glycosylase from Homo sapiens
[Arabidopsis thaliana]
Length = 391
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKK 38
E++ + L +PG GP+ A L + +
Sbjct: 244 ELQEAVAALCTLPGVGPKVAACIALFSLDQ 273
>gi|15219068|ref|NP_173590.1| OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1); oxidized purine base lesion
DNA N-glycosylase [Arabidopsis thaliana]
gi|11967657|emb|CAC19363.1| 8-oxoguanine DNA glycosylase [Arabidopsis thaliana]
gi|16074117|emb|CAC83625.1| 8-oxoguanine-DNA glycosylase [Arabidopsis thaliana]
gi|51971190|dbj|BAD44287.1| 8-oxoguanine DNA glycosylase-like protein [Arabidopsis thaliana]
gi|94442429|gb|ABF19002.1| At1g21710 [Arabidopsis thaliana]
gi|332192024|gb|AEE30145.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis thaliana]
Length = 365
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKK 38
E++ + L +PG GP+ A L + +
Sbjct: 244 ELQEAVAALCTLPGVGPKVAACIALFSLDQ 273
>gi|149375111|ref|ZP_01892883.1| Holliday junction DNA helicase motor protein [Marinobacter algicola
DG893]
gi|149360475|gb|EDM48927.1| Holliday junction DNA helicase motor protein [Marinobacter algicola
DG893]
Length = 210
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Query: 15 KILARIPGFGPRSARRATLHLVKK 38
L ++PG G ++A R L++
Sbjct: 108 NALVKLPGVGKKTAERL---LIEM 128
>gi|24113211|ref|NP_707721.1| Holliday junction DNA helicase RuvA [Shigella flexneri 2a str. 301]
gi|110805805|ref|YP_689325.1| Holliday junction DNA helicase RuvA [Shigella flexneri 5 str. 8401]
gi|44888467|sp|Q83KR4|RUVA_SHIFL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123342783|sp|Q0T3U5|RUVA_SHIF8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|24052207|gb|AAN43428.1| Holliday junction helicase subunit B [Shigella flexneri 2a str.
301]
gi|110615353|gb|ABF04020.1| Holliday junction helicase [Shigella flexneri 5 str. 8401]
Length = 203
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKE 40
++ ++ N ++ L ++PG G ++A R +V+ K+
Sbjct: 93 MSAQQFVNAVEREEVGPLVKLPGIGKKTAERL---IVEMKD 130
>gi|88800180|ref|ZP_01115748.1| Holliday junction DNA helicase motor protein [Reinekea sp. MED297]
gi|88777026|gb|EAR08233.1| Holliday junction DNA helicase motor protein [Reinekea sp. MED297]
Length = 201
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLG 44
L +IPG G ++A R +V+ K++L
Sbjct: 109 ALVKIPGVGKKTAERL---IVEMKDKLAQ 134
>gi|307245098|ref|ZP_07527191.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254053|ref|ZP_07535900.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258509|ref|ZP_07540246.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853987|gb|EFM86199.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862978|gb|EFM94925.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867413|gb|EFM99264.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 201
Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M +E+ + LA++ PG G ++A R
Sbjct: 93 MSVSQFANAVEH--EELAKLTKIPGIGRKTAERL 124
>gi|190149554|ref|YP_001968079.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303249558|ref|ZP_07335765.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307251815|ref|ZP_07533717.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307262875|ref|ZP_07544499.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|229470525|sp|B3H0C5|RUVA_ACTP7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189914685|gb|ACE60937.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302651632|gb|EFL81781.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306860722|gb|EFM92733.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306871780|gb|EFN03500.1| Holliday junction DNA helicase motor protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 201
Score = 35.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31
M +E+ + LA++ PG G ++A R
Sbjct: 93 MSVSQFANAVEH--EELAKLTKIPGIGRKTAERL 124
>gi|302386617|ref|YP_003822439.1| Holliday junction DNA helicase RuvA [Clostridium saccharolyticum
WM1]
gi|302197245|gb|ADL04816.1| Holliday junction DNA helicase RuvA [Clostridium saccharolyticum
WM1]
Length = 202
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
+ +E+ I K +++ PG G ++A+R L L K K L L +KV
Sbjct: 91 SALRPEELRRAIISGDAKAISKAPGVGAKTAQRIILDL-KDKIDLAEILPSGFTESADKV 149
>gi|218133570|ref|ZP_03462374.1| hypothetical protein BACPEC_01437 [Bacteroides pectinophilus ATCC
43243]
gi|217990945|gb|EEC56951.1| hypothetical protein BACPEC_01437 [Bacteroides pectinophilus ATCC
43243]
Length = 203
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAE 48
+K ++R PG G ++A+R + L +K +E L+
Sbjct: 108 VKAISRAPGIGAKTAQRMIIELKDKLKLEEAFEIRLSH 145
>gi|111221574|ref|YP_712368.1| Holliday junction DNA helicase RuvA [Frankia alni ACN14a]
gi|111149106|emb|CAJ60789.1| Holliday junction DNA helicase RuvA [Frankia alni ACN14a]
Length = 252
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L ++PG G + A+R L L
Sbjct: 108 ALTKVPGIGRKGAQRIVLDL 127
>gi|325105978|ref|YP_004275632.1| Holliday junction DNA helicase subunit RuvA [Pedobacter saltans DSM
12145]
gi|324974826|gb|ADY53810.1| Holliday junction DNA helicase subunit RuvA [Pedobacter saltans DSM
12145]
Length = 194
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRA 31
M I+ EIE I ++ I G GP++A+R
Sbjct: 88 MLSSISPIEIEQAIIKGEVGLIKSIKGIGPKTAQRL 123
>gi|323342039|ref|ZP_08082272.1| crossover junction ATP-dependent DNA helicase RuvA [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464464|gb|EFY09657.1| crossover junction ATP-dependent DNA helicase RuvA [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 195
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
+ +G +I I L ++PG GP+ A + L L
Sbjct: 88 SRFSGDDIVRAIDQEDMAFLKKLPGVGPKMASQMMLDL 125
>gi|255013506|ref|ZP_05285632.1| endonuclease III [Bacteroides sp. 2_1_7]
gi|262381706|ref|ZP_06074844.1| endonuclease III [Bacteroides sp. 2_1_33B]
gi|262296883|gb|EEY84813.1| endonuclease III [Bacteroides sp. 2_1_33B]
Length = 212
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 IKILARIPGFGPRSA 28
I L ++PG G ++A
Sbjct: 109 IDELQKLPGVGRKTA 123
>gi|108799233|ref|YP_639430.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. MCS]
gi|119868349|ref|YP_938301.1| Holliday junction DNA helicase motor protein [Mycobacterium sp.
KMS]
gi|126434891|ref|YP_001070582.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. JLS]
gi|123369347|sp|Q1B9R0|RUVA_MYCSS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230569|sp|A3PYW4|RUVA_MYCSJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230570|sp|A1UFA3|RUVA_MYCSK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|108769652|gb|ABG08374.1| Holliday junction DNA helicase subunit RuvA [Mycobacterium sp. MCS]
gi|119694438|gb|ABL91511.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. KMS]
gi|126234691|gb|ABN98091.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. JLS]
Length = 196
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VTALTRVPGIGKRGAERMVLEL 127
>gi|300856546|ref|YP_003781530.1| Holliday junction DNA helicase [Clostridium ljungdahlii DSM 13528]
gi|300436661|gb|ADK16428.1| Holliday junction DNA helicase [Clostridium ljungdahlii DSM 13528]
Length = 198
Score = 35.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I ++ +NL++ PG G ++A+R L L K + +G L +
Sbjct: 102 IISEDEKNLVRA----PGIGKKTAQRIILEL--KDKIDVGELTNS 140
>gi|255320811|ref|ZP_05361986.1| holliday junction DNA helicase RuvA [Acinetobacter radioresistens
SK82]
gi|262379413|ref|ZP_06072569.1| Holliday junction DNA helicase RuvA [Acinetobacter radioresistens
SH164]
gi|255302188|gb|EET81430.1| holliday junction DNA helicase RuvA [Acinetobacter radioresistens
SK82]
gi|262298870|gb|EEY86783.1| Holliday junction DNA helicase RuvA [Acinetobacter radioresistens
SH164]
Length = 200
Score = 35.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
L +IPG G ++A R + L LA+A
Sbjct: 109 LVKIPGVGKKTAERLMIEL----RDRFKTLAQA 137
>gi|86740076|ref|YP_480476.1| Holliday junction DNA helicase subunit RuvA [Frankia sp. CcI3]
gi|86566938|gb|ABD10747.1| Holliday junction DNA helicase subunit RuvA [Frankia sp. CcI3]
Length = 247
Score = 35.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 17 LARIPGFGPRSARRATLHLVKK--KEQLLGPL 46
L ++PG G + A+R L L + PL
Sbjct: 109 LTKVPGIGRKGAQRIVLDLRDRLGPPGDGAPL 140
>gi|120554625|ref|YP_958976.1| Holliday junction DNA helicase RuvA [Marinobacter aquaeolei VT8]
gi|166230564|sp|A1U1C0|RUVA_MARAV RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|120324474|gb|ABM18789.1| Holliday junction DNA helicase subunit RuvA [Marinobacter aquaeolei
VT8]
Length = 209
Score = 35.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Query: 15 KILARIPGFGPRSARRATLHLVKK 38
L ++PG G ++A R L++
Sbjct: 108 NSLVKLPGVGKKTAERL---LIEM 128
>gi|296170845|ref|ZP_06852406.1| crossover junction ATP-dependent DNA helicase RuvA [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894501|gb|EFG74242.1| crossover junction ATP-dependent DNA helicase RuvA [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 197
Score = 35.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VTALTRVPGIGKRGAERMVLEL 127
>gi|41407135|ref|NP_959971.1| Holliday junction DNA helicase motor protein [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|118465009|ref|YP_882656.1| Holliday junction DNA helicase RuvA [Mycobacterium avium 104]
gi|81414560|sp|Q741Q1|RUVA_MYCPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230566|sp|A0QIB8|RUVA_MYCA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|41395486|gb|AAS03354.1| RuvA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118166296|gb|ABK67193.1| holliday junction DNA helicase RuvA [Mycobacterium avium 104]
Length = 199
Score = 35.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VAALTRVPGIGKRGAERMVLEL 127
>gi|228475171|ref|ZP_04059897.1| holliday junction DNA helicase RuvA [Staphylococcus hominis SK119]
gi|314936245|ref|ZP_07843592.1| holliday junction DNA helicase RuvA [Staphylococcus hominis subsp.
hominis C80]
gi|228270782|gb|EEK12184.1| holliday junction DNA helicase RuvA [Staphylococcus hominis SK119]
gi|313654864|gb|EFS18609.1| holliday junction DNA helicase RuvA [Staphylococcus hominis subsp.
hominis C80]
Length = 201
Score = 35.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
T E++ I+ L + PG G ++AR+ L L K K ++ +E + + +V
Sbjct: 94 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL-KGKVKITEETSETLLQVEGQV 149
>gi|305663585|ref|YP_003859873.1| hypothetical protein Igag_1187 [Ignisphaera aggregans DSM 17230]
gi|304378154|gb|ADM27993.1| hypothetical protein Igag_1187 [Ignisphaera aggregans DSM 17230]
Length = 296
Score = 35.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 55 NKVCLCSICGNVDTTDPCAICI 76
+K C CG+ +D C IC
Sbjct: 262 SKATRCKYCGSYSDSDLCEICS 283
>gi|71275803|ref|ZP_00652087.1| DNA recombination protein, RuvA [Xylella fastidiosa Dixon]
gi|71900402|ref|ZP_00682535.1| DNA recombination protein, RuvA [Xylella fastidiosa Ann-1]
gi|170730217|ref|YP_001775650.1| Holliday junction DNA helicase RuvA [Xylella fastidiosa M12]
gi|229560142|sp|B0U2E1|RUVA_XYLFM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|71163381|gb|EAO13099.1| DNA recombination protein, RuvA [Xylella fastidiosa Dixon]
gi|71729834|gb|EAO31932.1| DNA recombination protein, RuvA [Xylella fastidiosa Ann-1]
gi|167965010|gb|ACA12020.1| holliday junction binding protein, DNA helicase [Xylella fastidiosa
M12]
Length = 194
Score = 35.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 14 IKILARIPGFGPRSARRA 31
+ L IPG G ++A R
Sbjct: 107 VNALTVIPGIGKKTAERM 124
>gi|332363341|gb|EGJ41126.1| DNA helicase RecG [Streptococcus sanguinis SK49]
Length = 671
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|330830784|ref|YP_004393736.1| DNA polymerase IV [Aeromonas veronii B565]
gi|328805920|gb|AEB51119.1| DNA polymerase IV [Aeromonas veronii B565]
Length = 359
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 17 LARIPGFGPRSARRA 31
L ++PG G ++A R
Sbjct: 186 LGKLPGVGRKTAERL 200
>gi|271967390|ref|YP_003341586.1| Holliday junction DNA helicase subunit RuvA [Streptosporangium
roseum DSM 43021]
gi|270510565|gb|ACZ88843.1| Holliday junction DNA helicase subunit RuvA [Streptosporangium
roseum DSM 43021]
Length = 206
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 14 IKILARIPGFGPRSARRA 31
+K L R+PG GP+ A+R
Sbjct: 106 VKALTRVPGVGPKGAQRI 123
>gi|114776899|ref|ZP_01451942.1| DNA topoisomerase I [Mariprofundus ferrooxydans PV-1]
gi|114552985|gb|EAU55416.1| DNA topoisomerase I [Mariprofundus ferrooxydans PV-1]
Length = 756
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 21/103 (20%)
Query: 83 SVIIVVEDVADLWALERSKAVNAL-YHVL------------GGSLSPLDRIGPEDIGIQS 129
S ++VVE A +E+ Y VL GS+ P + I
Sbjct: 2 SAVVVVESPAKAKTIEK---YLGKGYKVLASYGHVRAFPKKDGSVDPEQDFAIKYEVIPD 58
Query: 130 LIERIEV-----KKIRELIFAISATIEGQTTAHYIMDKLKGID 167
+R++ K LI A EG+ A ++ + L+
Sbjct: 59 KKKRLDAIDKALKSADTLILASDLDREGEAIAWHVAEVLRERG 101
>gi|254516709|ref|ZP_05128768.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR5-3]
gi|219675132|gb|EED31499.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR5-3]
Length = 203
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 8/41 (19%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKE 40
+ ++ L +PG G ++A R L++ ++
Sbjct: 93 MDSDSFARAVQADDLTALVALPGVGKKTAERL---LIEMRD 130
>gi|325688114|gb|EGD30133.1| DNA helicase RecG [Streptococcus sanguinis SK72]
Length = 671
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|288561408|ref|YP_003424894.1| radical SAM domain-containing protein [Methanobrevibacter
ruminantium M1]
gi|288544118|gb|ADC48002.1| radical SAM domain-containing protein [Methanobrevibacter
ruminantium M1]
Length = 371
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 15 KILARIPGFGPRSARRA 31
+ L R+PG GP+SARR
Sbjct: 313 RELIRVPGIGPKSARRI 329
>gi|225374901|ref|ZP_03752122.1| hypothetical protein ROSEINA2194_00524 [Roseburia inulinivorans DSM
16841]
gi|225213284|gb|EEG95638.1| hypothetical protein ROSEINA2194_00524 [Roseburia inulinivorans DSM
16841]
Length = 203
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 15 KILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNKVC 58
K +A+ PG G ++A+R L L + ++ LA+ + NK
Sbjct: 108 KAIAKAPGVGAKTAQRLILELKDKLSLEDAFEQKLAKNDNPVQNKAK 154
>gi|150007785|ref|YP_001302528.1| endonuclease III [Parabacteroides distasonis ATCC 8503]
gi|256840051|ref|ZP_05545560.1| endonuclease III [Parabacteroides sp. D13]
gi|298376845|ref|ZP_06986800.1| endonuclease III [Bacteroides sp. 3_1_19]
gi|301310179|ref|ZP_07216118.1| endonuclease III [Bacteroides sp. 20_3]
gi|149936209|gb|ABR42906.1| endonuclease III [Parabacteroides distasonis ATCC 8503]
gi|256738981|gb|EEU52306.1| endonuclease III [Parabacteroides sp. D13]
gi|298266723|gb|EFI08381.1| endonuclease III [Bacteroides sp. 3_1_19]
gi|300831753|gb|EFK62384.1| endonuclease III [Bacteroides sp. 20_3]
Length = 221
Score = 35.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 IKILARIPGFGPRSA 28
I L ++PG G ++A
Sbjct: 118 IDELQKLPGVGRKTA 132
>gi|332363900|gb|EGJ41679.1| DNA helicase RecG [Streptococcus sanguinis SK355]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|327489060|gb|EGF20855.1| DNA helicase RecG [Streptococcus sanguinis SK1058]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|325696972|gb|EGD38859.1| DNA helicase RecG [Streptococcus sanguinis SK160]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|324995182|gb|EGC27094.1| DNA helicase RecG [Streptococcus sanguinis SK678]
gi|327469130|gb|EGF14602.1| DNA helicase RecG [Streptococcus sanguinis SK330]
gi|327473512|gb|EGF18932.1| DNA helicase RecG [Streptococcus sanguinis SK408]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|324993503|gb|EGC25423.1| DNA helicase RecG [Streptococcus sanguinis SK405]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|324990137|gb|EGC22075.1| DNA helicase RecG [Streptococcus sanguinis SK353]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|323353284|ref|ZP_08087817.1| DNA helicase RecG [Streptococcus sanguinis VMC66]
gi|322121230|gb|EFX92993.1| DNA helicase RecG [Streptococcus sanguinis VMC66]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|191638299|ref|YP_001987465.1| Exodeoxyribonuclease V, alpha subunit [Lactobacillus casei BL23]
gi|190712601|emb|CAQ66607.1| Exodeoxyribonuclease V, alpha subunit [Lactobacillus casei BL23]
gi|327382327|gb|AEA53803.1| Exodeoxyribonuclease V alpha chain [Lactobacillus casei LC2W]
gi|327385527|gb|AEA57001.1| Exodeoxyribonuclease V alpha chain [Lactobacillus casei BD-II]
Length = 822
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 13 LIKILA--RIPGFGPRSARRATLHL 35
L+ L+ + PG GP++A + HL
Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114
>gi|126668399|ref|ZP_01739356.1| Holliday junction DNA helicase motor protein [Marinobacter sp.
ELB17]
gi|126627108|gb|EAZ97748.1| Holliday junction DNA helicase motor protein [Marinobacter sp.
ELB17]
Length = 209
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Query: 15 KILARIPGFGPRSARRATLHLVKK 38
L ++PG G ++A R L++
Sbjct: 108 SALVKLPGVGKKTAERL---LIEM 128
>gi|332360531|gb|EGJ38341.1| DNA helicase RecG [Streptococcus sanguinis SK1056]
Length = 671
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|227535214|ref|ZP_03965263.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227187098|gb|EEI67165.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 822
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 13 LIKILA--RIPGFGPRSARRATLHL 35
L+ L+ + PG GP++A + HL
Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114
>gi|126725530|ref|ZP_01741372.1| Holliday junction DNA helicase motor protein [Rhodobacterales
bacterium HTCC2150]
gi|126704734|gb|EBA03825.1| Holliday junction DNA helicase motor protein [Rhodobacterales
bacterium HTCC2150]
Length = 221
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57
PG GP+ A+R L L K K + L ++ V
Sbjct: 114 PGVGPKIAQRVVLEL-KNKAPAIMALGGSLDEATGSV 149
>gi|116494786|ref|YP_806520.1| exonuclease V subunit alpha [Lactobacillus casei ATCC 334]
gi|116104936|gb|ABJ70078.1| ATP-dependent DNA helicase, RecD/TraA family [Lactobacillus casei
ATCC 334]
Length = 822
Score = 35.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 13 LIKILA--RIPGFGPRSARRATLHL 35
L+ L+ + PG GP++A + HL
Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114
>gi|301066351|ref|YP_003788374.1| ATP-dependent exoDNAse [Lactobacillus casei str. Zhang]
gi|300438758|gb|ADK18524.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase
superfamily I member [Lactobacillus casei str. Zhang]
Length = 822
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 13 LIKILA--RIPGFGPRSARRATLHL 35
L+ L+ + PG GP++A + HL
Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114
>gi|291533989|emb|CBL07102.1| Holliday junction DNA helicase subunit RuvA [Megamonas hypermegale
ART12/1]
Length = 161
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ +L PG G ++A R L L
Sbjct: 106 VSLLTNAPGIGKKTAERIVLEL 127
>gi|238021644|ref|ZP_04602070.1| hypothetical protein GCWU000324_01546 [Kingella oralis ATCC 51147]
gi|237866258|gb|EEP67300.1| hypothetical protein GCWU000324_01546 [Kingella oralis ATCC 51147]
Length = 195
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35
+ E+ I + + R+ PG G ++A R L L
Sbjct: 91 SAFSADELAAAIAQEDIKRLSAAPGIGKKTAERMILEL 128
>gi|254465910|ref|ZP_05079321.1| peroxisomal NADH pyrophosphatase nudt12 [Rhodobacterales bacterium
Y4I]
gi|206686818|gb|EDZ47300.1| peroxisomal NADH pyrophosphatase nudt12 [Rhodobacterales bacterium
Y4I]
Length = 328
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 11/87 (12%)
Query: 40 EQLLGPLAEAMANIYNKVCLCSICGNVDT------TDPCAICID---QQRDASVIIVVED 90
E L A+AM + C+ CG C C + D VI++V
Sbjct: 142 EAELASTAKAMLAWHRSHRFCACCGAPSHVAQAGWQRICPACKAPHFPRTDPVVIMLVTH 201
Query: 91 VADLWALERSKAV-NALYHVLGGSLSP 116
D + RS +Y +L G + P
Sbjct: 202 -EDSVLMGRSPGWPEGMYSLLAGFVEP 227
>gi|125717410|ref|YP_001034543.1| ATP-dependent DNA helicase RecG [Streptococcus sanguinis SK36]
gi|125497327|gb|ABN43993.1| ATP-dependent DNA helicase recG, transcription-repair coupling
factor, putative [Streptococcus sanguinis SK36]
Length = 671
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|325690294|gb|EGD32298.1| DNA helicase RecG [Streptococcus sanguinis SK115]
Length = 671
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 NLIKILARIPGFGPRSARRAT 32
NL + L +PG GP+SA +
Sbjct: 2 NLHQPLTVLPGVGPKSAEKFA 22
>gi|313114613|ref|ZP_07800121.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623077|gb|EFQ06524.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 468
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 15 KILARIPGFGPRSARRA 31
++L R+PG GP+SARR
Sbjct: 350 EMLLRVPGIGPKSARRI 366
>gi|258653556|ref|YP_003202712.1| Holliday junction DNA helicase RuvA [Nakamurella multipartita DSM
44233]
gi|258556781|gb|ACV79723.1| Holliday junction DNA helicase RuvA [Nakamurella multipartita DSM
44233]
Length = 207
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 17 LARIPGFGPRSARRATLHL 35
L R PG G +SA R L L
Sbjct: 109 LCRAPGIGKKSAERLVLEL 127
>gi|146276574|ref|YP_001166733.1| NUDIX hydrolase [Rhodobacter sphaeroides ATCC 17025]
gi|145554815|gb|ABP69428.1| NUDIX hydrolase [Rhodobacter sphaeroides ATCC 17025]
Length = 317
Score = 35.3 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 9/62 (14%)
Query: 36 VKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT------TDPCAICID---QQRDASVII 86
+ +E L A+A+ + CS CG C +C + D VI+
Sbjct: 127 LSPREAELAATAKALVQWHRSHRFCSACGAPSAPTEGGWHRRCTVCAAQHFPRTDPVVIM 186
Query: 87 VV 88
+V
Sbjct: 187 LV 188
>gi|254787341|ref|YP_003074770.1| Holliday junction DNA helicase RuvA [Teredinibacter turnerae T7901]
gi|259495657|sp|C5BQT5|RUVA_TERTT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|237687527|gb|ACR14791.1| Holliday junction DNA helicase RuvA [Teredinibacter turnerae T7901]
Length = 206
Score = 35.3 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQL 42
+E+ + L ++PG G ++A R +++ +++L
Sbjct: 102 LEDNLNALVKVPGVGKKTAERL---IIEMRDKL 131
>gi|260431115|ref|ZP_05785086.1| holliday junction DNA helicase RuvA [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414943|gb|EEX08202.1| holliday junction DNA helicase RuvA [Silicibacter lacuscaerulensis
ITI-1157]
Length = 223
Score = 35.3 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
G GP++A+R L L K K + + + +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGTVTEAMD 147
>gi|269795058|ref|YP_003314513.1| Holliday junction DNA helicase subunit RuvA [Sanguibacter keddieii
DSM 10542]
gi|269097243|gb|ACZ21679.1| Holliday junction DNA helicase subunit RuvA [Sanguibacter keddieii
DSM 10542]
Length = 206
Score = 35.3 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L R+PG G + A+R L L
Sbjct: 106 VKALTRVPGIGAKGAQRLILEL 127
>gi|163855209|ref|YP_001629507.1| Holliday junction DNA helicase RuvA [Bordetella petrii DSM 12804]
gi|229560006|sp|A9I8F2|RUVA_BORPD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|163258937|emb|CAP41236.1| holliday junction DNA helicase [Bordetella petrii]
Length = 190
Score = 35.3 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
L R+PG G ++A R L++ + +L +
Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGAT 139
>gi|239631616|ref|ZP_04674647.1| ATP-dependent exoDNAse [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|239526081|gb|EEQ65082.1| ATP-dependent exoDNAse [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 843
Score = 35.3 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 13 LIKILA--RIPGFGPRSARRATLHL 35
L+ L+ + PG GP++A + HL
Sbjct: 111 LVDYLSSDKFPGIGPKTATKIIDHL 135
>gi|118467715|ref|YP_887263.1| Holliday junction DNA helicase RuvA [Mycobacterium smegmatis str.
MC2 155]
gi|166230568|sp|A0QWH5|RUVA_MYCS2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|118169002|gb|ABK69898.1| holliday junction DNA helicase RuvA [Mycobacterium smegmatis str.
MC2 155]
Length = 195
Score = 35.3 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VTALTRVPGIGKRGAERMVLEL 127
>gi|169629967|ref|YP_001703616.1| Holliday junction DNA helicase RuvA [Mycobacterium abscessus ATCC
19977]
gi|229560105|sp|B1MCJ1|RUVA_MYCA9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|169241934|emb|CAM62962.1| Holliday junction DNA helicase RuvA [Mycobacterium abscessus]
Length = 202
Score = 34.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VAALTRVPGIGKRGAERLVLEL 127
>gi|319947801|ref|ZP_08021995.1| Holliday junction DNA helicase RuvA [Dietzia cinnamea P4]
gi|319438525|gb|EFV93451.1| Holliday junction DNA helicase RuvA [Dietzia cinnamea P4]
Length = 199
Score = 34.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+K L +PG G R+A R L L
Sbjct: 106 VKALTLVPGVGKRTAERMVLEL 127
>gi|297845148|ref|XP_002890455.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297336297|gb|EFH66714.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 366
Score = 34.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKK 38
+++ + L +PG GP+ A L + +
Sbjct: 245 DLQEAVSALCTLPGVGPKVAACIALFSLDQ 274
>gi|288818057|ref|YP_003432405.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|288787457|dbj|BAI69204.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308751658|gb|ADO45141.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
Length = 209
Score = 34.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M + G E+ I+ L R+PG G ++A
Sbjct: 95 MIIEDYGGEVPKSIEELTRLPGVGRKTA 122
>gi|223986042|ref|ZP_03636071.1| hypothetical protein HOLDEFILI_03377 [Holdemania filiformis DSM
12042]
gi|223961992|gb|EEF66475.1| hypothetical protein HOLDEFILI_03377 [Holdemania filiformis DSM
12042]
Length = 193
Score = 34.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNKVC 58
+ L ++PG G ++A + L L + ++E G ++A+ + +
Sbjct: 104 VAALKKMPGIGAKTASQIILDLKGKLVREETAEGKSSQAIEDALEALK 151
>gi|221141089|ref|ZP_03565582.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|302751470|gb|ADL65647.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus
subsp. aureus str. JKD6008]
Length = 200
Score = 34.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|306836241|ref|ZP_07469223.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium
accolens ATCC 49726]
gi|304567833|gb|EFM43416.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium
accolens ATCC 49726]
Length = 202
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
+K L IPG G R A+R TL L + + A
Sbjct: 106 VKALQSIPGVGKRMAQRLTLEL----KDKVKRFA 135
>gi|295103877|emb|CBL01421.1| Predicted DNA-binding protein with the Helix-hairpin-helix motif
[Faecalibacterium prausnitzii SL3/3]
Length = 452
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 15 KILARIPGFGPRSARRA 31
++L R+PG GP+SARR
Sbjct: 334 EMLLRVPGIGPKSARRI 350
>gi|227503511|ref|ZP_03933560.1| Holliday junction DNA helicase motor protein [Corynebacterium
accolens ATCC 49725]
gi|227076014|gb|EEI13977.1| Holliday junction DNA helicase motor protein [Corynebacterium
accolens ATCC 49725]
Length = 202
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
+K L IPG G R A+R TL L + + A
Sbjct: 106 VKALQSIPGVGKRMAQRLTLEL----KDKVKRFA 135
>gi|254511523|ref|ZP_05123590.1| Holliday junction DNA helicase RuvA [Rhodobacteraceae bacterium
KLH11]
gi|221535234|gb|EEE38222.1| Holliday junction DNA helicase RuvA [Rhodobacteraceae bacterium
KLH11]
Length = 225
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55
G GP++A+R L L K K + + + +
Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGTVTEAMD 147
>gi|160942796|ref|ZP_02090037.1| hypothetical protein FAEPRAM212_00273 [Faecalibacterium prausnitzii
M21/2]
gi|158445961|gb|EDP22964.1| hypothetical protein FAEPRAM212_00273 [Faecalibacterium prausnitzii
M21/2]
Length = 452
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 15 KILARIPGFGPRSARRA 31
++L R+PG GP+SARR
Sbjct: 334 EMLLRVPGIGPKSARRI 350
>gi|85859218|ref|YP_461420.1| SMF family protein involved in DNA uptake [Syntrophus
aciditrophicus SB]
gi|85722309|gb|ABC77252.1| SMF family protein involved in DNA uptake [Syntrophus
aciditrophicus SB]
Length = 394
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Query: 15 KILARIPGFGPRSARRA-TLH 34
+ L +PG GP++A R H
Sbjct: 42 QDLMSVPGIGPKTASRIKAFH 62
>gi|282916910|ref|ZP_06324668.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus D139]
gi|283770716|ref|ZP_06343608.1| Holliday junction ATP-dependent DNA helicase ruvA [Staphylococcus
aureus subsp. aureus H19]
gi|282319397|gb|EFB49749.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus D139]
gi|283460863|gb|EFC07953.1| Holliday junction ATP-dependent DNA helicase ruvA [Staphylococcus
aureus subsp. aureus H19]
Length = 200
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|227504981|ref|ZP_03935030.1| Holliday junction DNA helicase motor protein [Corynebacterium
striatum ATCC 6940]
gi|227198431|gb|EEI78479.1| Holliday junction DNA helicase motor protein [Corynebacterium
striatum ATCC 6940]
Length = 194
Score = 34.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 16/48 (33%), Gaps = 9/48 (18%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
+ ++ I L IPG G R A R L L + A
Sbjct: 84 MGPSQLAQAISSGDAKTLQTIPGVGKRMAERLALEL----RDKVSAFA 127
>gi|323143601|ref|ZP_08078278.1| Holliday junction DNA helicase RuvA [Succinatimonas hippei YIT
12066]
gi|322416664|gb|EFY07321.1| Holliday junction DNA helicase RuvA [Succinatimonas hippei YIT
12066]
Length = 207
Score = 34.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53
L ++PG G ++A R + L K PL++ ++
Sbjct: 108 ALTQVPGVGKKTAERLMVEL--KDRLDKLPLSDTVSTA 143
>gi|258545752|ref|ZP_05705986.1| Holliday junction DNA helicase RuvA [Cardiobacterium hominis ATCC
15826]
gi|258518997|gb|EEV87856.1| Holliday junction DNA helicase RuvA [Cardiobacterium hominis ATCC
15826]
Length = 197
Score = 34.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 ILARIPGFGPRSARRA 31
L ++PG G ++A R
Sbjct: 108 ALVKLPGVGKKTAERL 123
>gi|198282210|ref|YP_002218531.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665092|ref|YP_002424575.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|226698723|sp|B5EJL8|RUVA_ACIF5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725431|sp|B7J3G2|RUVA_ACIF2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|198246731|gb|ACH82324.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218517305|gb|ACK77891.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 193
Score = 34.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L IPG GP++A R + L
Sbjct: 109 QLTAIPGIGPKTAERLVVEL 128
>gi|126664759|ref|ZP_01735743.1| hypothetical protein MELB17_02935 [Marinobacter sp. ELB17]
gi|126631085|gb|EBA01699.1| hypothetical protein MELB17_02935 [Marinobacter sp. ELB17]
Length = 220
Score = 34.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL-DYLDDGTIFEAIRSRTVL 201
G AH++ +L+ VK +R A M S L +YL + T A+ R L
Sbjct: 131 GDVPAHFLAKRLRN-GVKWSRDARH-SMASNLEEYLHEET--GALPGRREL 177
>gi|312196177|ref|YP_004016238.1| Holliday junction DNA helicase RuvA [Frankia sp. EuI1c]
gi|311227513|gb|ADP80368.1| Holliday junction DNA helicase RuvA [Frankia sp. EuI1c]
Length = 205
Score = 34.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 16 ILARIPGFGPRSARRATLHL 35
L R+PG G + A+R L L
Sbjct: 108 ALTRVPGVGRKGAQRIVLDL 127
>gi|258512078|ref|YP_003185512.1| Holliday junction DNA helicase RuvA [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478804|gb|ACV59123.1| Holliday junction DNA helicase RuvA [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 208
Score = 34.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 15 KILARIPGFGPRSARRATLHL 35
+ L+R+PG G + A R + L
Sbjct: 107 ESLSRLPGIGRKLASRLVVEL 127
>gi|171915820|ref|ZP_02931290.1| Holliday junction DNA helicase motor protein [Verrucomicrobium
spinosum DSM 4136]
Length = 203
Score = 34.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L+RI G G ++A R L L
Sbjct: 108 VTALSRISGVGKKTAERIVLEL 129
>gi|37522453|ref|NP_925830.1| Holliday junction DNA helicase RuvA [Gloeobacter violaceus PCC
7421]
gi|44888383|sp|Q7NCU2|RUVA_GLOVI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|35213454|dbj|BAC90825.1| holliday junction DNA helicase [Gloeobacter violaceus PCC 7421]
Length = 206
Score = 34.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 15 KILARIPGFGPRSARRATLHL 35
+ LA PG G ++A+R L L
Sbjct: 112 RALALAPGVGAKTAQRLALEL 132
>gi|330683931|gb|EGG95698.1| Holliday junction DNA helicase RuvA [Staphylococcus epidermidis
VCU121]
Length = 200
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMAN 52
T E++ I+ L + PG G ++AR+ L L V+ E+ L M
Sbjct: 93 TPNEVKQAIENENDAYLTKFPGIGKKTARQIVLDLKGKVQITEENTDTLLNVMNE 147
>gi|322801300|gb|EFZ21987.1| hypothetical protein SINV_11621 [Solenopsis invicta]
Length = 972
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 32 TLH---LVKKKEQLLGPLAEAMANIYNKV---CLCSICGNVDTTDPCAIC 75
LH L+ + Q+L L+ + ++ V C ICG + CA C
Sbjct: 863 ALHRWELLDARAQVLKHLSASSFDVQKDVELQNECRICGKISPGPQCANC 912
>gi|253732298|ref|ZP_04866463.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724087|gb|EES92816.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 200
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|224369369|ref|YP_002603533.1| FdhB6 [Desulfobacterium autotrophicum HRM2]
gi|223692086|gb|ACN15369.1| FdhB6 [Desulfobacterium autotrophicum HRM2]
Length = 375
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 72 CAICIDQQRDASVIIV--VEDVADLWALERSKAVNALYHVLGGSL---SPLDRIGPEDIG 126
C IC + + I + V+ D + + +L G PL + E +
Sbjct: 162 CTICTSPFPENADICITLVDQPDDTLGVF-AGTDRGQ-QLLMGLALGERPLPKTRKERLK 219
Query: 127 IQSLIERIEVKKIRELIFAISATIEG 152
KK+ E + A ++T+EG
Sbjct: 220 AVLAQRVSVEKKVFEDLTATTSTLEG 245
>gi|46912737|emb|CAG19527.1| Putative holliday junction DNA helicase RuvA [Photobacterium
profundum SS9]
Length = 228
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L +IPG G ++A R
Sbjct: 129 ITTLVKIPGVGKKTAERLV 147
>gi|291557374|emb|CBL34491.1| endonuclease III [Eubacterium siraeum V10Sc8a]
Length = 212
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M + G EI + I+ L ++PG G ++A
Sbjct: 96 MLRDDFGGEIPDTIEQLVKLPGVGRKTA 123
>gi|39998418|ref|NP_954369.1| radical SAM domain-containing protein [Geobacter sulfurreducens
PCA]
gi|39985365|gb|AAR36719.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
gi|298507363|gb|ADI86086.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter sulfurreducens KN400]
Length = 431
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 8/45 (17%)
Query: 15 KILARIPGFGPRSARRATL-----HLVKKKEQLLGPLAEAMANIY 54
+ L R+PG G RSA+R L HL L L M
Sbjct: 334 EALLRVPGIGVRSAQRIVLARRGSHL---SLDDLPRLGVVMKRAR 375
>gi|150392119|ref|YP_001322168.1| rubrerythrin [Alkaliphilus metalliredigens QYMF]
gi|149951981|gb|ABR50509.1| Rubrerythrin [Alkaliphilus metalliredigens QYMF]
Length = 186
Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 10/61 (16%)
Query: 25 PRSARRATLHLVKKKEQLLGPLAEAMANIYN-------KVCLCSICGNVDTT---DPCAI 74
+ A RA + ++ ++ EA + +C ICG+ T D C I
Sbjct: 114 EKGAERAFHYALEAEKIHAKLFKEAQEAAKQGKDYDIGGIYVCEICGHTATNERPDRCPI 173
Query: 75 C 75
C
Sbjct: 174 C 174
>gi|255558622|ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
gi|223540555|gb|EEF42122.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
Length = 412
Score = 34.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 10/64 (15%)
Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQ----------LLGPLAEAMANIYNKVC 58
+++ +I L +PG GP+ A L + + L +A
Sbjct: 253 DLQVVIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRHLLPELAGARLTPK 312
Query: 59 LCSI 62
LCS
Sbjct: 313 LCSR 316
>gi|159037423|ref|YP_001536676.1| Holliday junction DNA helicase RuvA [Salinispora arenicola CNS-205]
gi|189045766|sp|A8LXW8|RUVA_SALAI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|157916258|gb|ABV97685.1| Holliday junction DNA helicase RuvA [Salinispora arenicola CNS-205]
Length = 200
Score = 34.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 17 LARIPGFGPRSARRATLHL 35
L R+PG G + A R L L
Sbjct: 109 LTRVPGIGKKGAERLVLEL 127
>gi|57650523|ref|YP_186536.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus COL]
gi|82751240|ref|YP_416981.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus RF122]
gi|87160146|ref|YP_494293.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195453|ref|YP_500257.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221756|ref|YP_001332578.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509868|ref|YP_001575527.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253733107|ref|ZP_04867272.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus TCH130]
gi|258450532|ref|ZP_05698594.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5948]
gi|262048631|ref|ZP_06021514.1| holliday junction DNA helicase [Staphylococcus aureus D30]
gi|262051292|ref|ZP_06023516.1| holliday junction DNA helicase [Staphylococcus aureus 930918-3]
gi|282920191|ref|ZP_06327916.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9765]
gi|284024698|ref|ZP_06379096.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 132]
gi|304380761|ref|ZP_07363429.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|71153735|sp|Q5HFC1|RUVA_STAAC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123098028|sp|Q2FXT3|RUVA_STAA8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123740965|sp|Q2YT88|RUVA_STAAB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|123763287|sp|Q2FG85|RUVA_STAA3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|172048928|sp|A6QHI4|RUVA_STAAE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045775|sp|A8Z2H0|RUVA_STAAT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|57284709|gb|AAW36803.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus COL]
gi|82656771|emb|CAI81200.1| Holliday junction DNA helicase [Staphylococcus aureus RF122]
gi|87126120|gb|ABD20634.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203011|gb|ABD30821.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374556|dbj|BAF67816.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368677|gb|ABX29648.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253728863|gb|EES97592.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus TCH130]
gi|257861690|gb|EEV84489.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5948]
gi|259160929|gb|EEW45949.1| holliday junction DNA helicase [Staphylococcus aureus 930918-3]
gi|259163278|gb|EEW47837.1| holliday junction DNA helicase [Staphylococcus aureus D30]
gi|282594539|gb|EFB99524.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9765]
gi|283470918|emb|CAQ50129.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus ST398]
gi|298694921|gb|ADI98143.1| Holliday junction DNA helicase [Staphylococcus aureus subsp. aureus
ED133]
gi|302333315|gb|ADL23508.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus
subsp. aureus JKD6159]
gi|304340698|gb|EFM06630.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|315198657|gb|EFU28985.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus
subsp. aureus CGS01]
gi|320140471|gb|EFW32325.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144010|gb|EFW35779.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323440805|gb|EGA98514.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus O11]
gi|323442846|gb|EGB00471.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus O46]
gi|329314316|gb|AEB88729.1| Holliday junction ATP-dependent DNA helicase ruvA [Staphylococcus
aureus subsp. aureus T0131]
gi|329728425|gb|EGG64862.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 21189]
gi|329733154|gb|EGG69491.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 21193]
Length = 200
Score = 34.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|269941127|emb|CBI49513.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus TW20]
Length = 200
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|258424067|ref|ZP_05686949.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9635]
gi|294848671|ref|ZP_06789417.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9754]
gi|257845688|gb|EEV69720.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9635]
gi|294824697|gb|EFG41120.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9754]
Length = 203
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 96 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 130
>gi|167750867|ref|ZP_02422994.1| hypothetical protein EUBSIR_01851 [Eubacterium siraeum DSM 15702]
gi|167656046|gb|EDS00176.1| hypothetical protein EUBSIR_01851 [Eubacterium siraeum DSM 15702]
Length = 212
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M + G EI + I+ L ++PG G ++A
Sbjct: 96 MLRDDFGGEIPDTIEQLVKLPGVGRKTA 123
>gi|148926965|ref|ZP_01810642.1| putative Holliday junction DNA helicase [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145845049|gb|EDK22146.1| putative Holliday junction DNA helicase [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 183
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 17 LARIPGFGPRSARRATLHLVKKK-------EQLLGPLAEAMA 51
L ++PG GP+SA+R + L K + LA +
Sbjct: 110 LKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLT 151
>gi|90411664|ref|ZP_01219674.1| Holliday junction DNA helicase motor protein [Photobacterium
profundum 3TCK]
gi|90327554|gb|EAS43907.1| Holliday junction DNA helicase motor protein [Photobacterium
profundum 3TCK]
Length = 206
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L +IPG G ++A R
Sbjct: 107 ITTLVKIPGVGKKTAERLV 125
>gi|49483886|ref|YP_041110.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257425766|ref|ZP_05602190.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428426|ref|ZP_05604824.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|282904222|ref|ZP_06312110.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus C160]
gi|282906048|ref|ZP_06313903.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908961|ref|ZP_06316779.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282911278|ref|ZP_06319080.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914447|ref|ZP_06322233.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M899]
gi|282919416|ref|ZP_06327151.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus C427]
gi|282924793|ref|ZP_06332459.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus C101]
gi|283958402|ref|ZP_06375853.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293503520|ref|ZP_06667367.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510539|ref|ZP_06669244.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M809]
gi|293537082|ref|ZP_06671762.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M1015]
gi|295428217|ref|ZP_06820849.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590815|ref|ZP_06949453.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus MN8]
gi|56749557|sp|Q6GG62|RUVA_STAAR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|49242015|emb|CAG40713.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271460|gb|EEV03606.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275267|gb|EEV06754.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|282313159|gb|EFB43555.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus C101]
gi|282317226|gb|EFB47600.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus C427]
gi|282321628|gb|EFB51953.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M899]
gi|282324973|gb|EFB55283.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327225|gb|EFB57520.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331340|gb|EFB60854.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595840|gb|EFC00804.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus C160]
gi|283790551|gb|EFC29368.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919927|gb|EFD96995.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M1015]
gi|291095186|gb|EFE25451.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466430|gb|EFF08951.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M809]
gi|295128575|gb|EFG58209.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575701|gb|EFH94417.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus MN8]
gi|312437891|gb|ADQ76962.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus TCH60]
gi|315195545|gb|EFU25932.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus CGS00]
Length = 200
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|86150190|ref|ZP_01068417.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597606|ref|ZP_01100840.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218562427|ref|YP_002344206.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|20455273|sp|Q9PPC1|RUVA_CAMJE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|85839306|gb|EAQ56568.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190198|gb|EAQ94173.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360133|emb|CAL34927.1| putative Holliday junction ATP-dependent DNA helicase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926045|gb|ADC28397.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315928270|gb|EFV07586.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929355|gb|EFV08561.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 305]
Length = 183
Score = 34.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 17 LARIPGFGPRSARRATLHLVKKK-------EQLLGPLAEAMA 51
L ++PG GP+SA+R + L K + LA +
Sbjct: 110 LKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLT 151
>gi|297627092|ref|YP_003688855.1| endonuclease III [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922857|emb|CBL57437.1| Putative endonuclease III [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 252
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 14 IKILARIPGFGPRSAR 29
I L +PG G ++A+
Sbjct: 137 IDQLTSLPGVGRKTAQ 152
>gi|257793715|ref|ZP_05642694.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9781]
gi|258410986|ref|ZP_05681266.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9763]
gi|258420213|ref|ZP_05683168.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9719]
gi|258438215|ref|ZP_05689499.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus
A9299]
gi|258443678|ref|ZP_05692017.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8115]
gi|258446885|ref|ZP_05695039.1| Holliday junction DNA helicase [Staphylococcus aureus A6300]
gi|258448799|ref|ZP_05696911.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus
A6224]
gi|295406763|ref|ZP_06816568.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8819]
gi|297245654|ref|ZP_06929519.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8796]
gi|257787687|gb|EEV26027.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9781]
gi|257840136|gb|EEV64600.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9763]
gi|257843924|gb|EEV68318.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9719]
gi|257848259|gb|EEV72250.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus
A9299]
gi|257851084|gb|EEV75027.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8115]
gi|257854460|gb|EEV77409.1| Holliday junction DNA helicase [Staphylococcus aureus A6300]
gi|257858077|gb|EEV80966.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus
A6224]
gi|294968510|gb|EFG44534.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8819]
gi|297177305|gb|EFH36557.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8796]
Length = 203
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 96 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 130
>gi|257431064|ref|ZP_05607443.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433750|ref|ZP_05610108.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus E1410]
gi|257436665|ref|ZP_05612709.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M876]
gi|257278267|gb|EEV08909.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281843|gb|EEV11980.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus E1410]
gi|257284016|gb|EEV14139.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus M876]
Length = 203
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 96 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 130
>gi|242280346|ref|YP_002992475.1| Holliday junction DNA helicase RuvA [Desulfovibrio salexigens DSM
2638]
gi|259495638|sp|C6C065|RUVA_DESAD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|242123240|gb|ACS80936.1| Holliday junction DNA helicase RuvA [Desulfovibrio salexigens DSM
2638]
Length = 203
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGP 45
+ K++++L+ K L+ +PG GP+SAR+ L +K K + L
Sbjct: 92 SQFGPKDLQDLVFREDVKTLSIVPGIGPKSARQI-LWSLKDKMETLKS 138
>gi|145594353|ref|YP_001158650.1| Holliday junction DNA helicase RuvA [Salinispora tropica CNB-440]
gi|189045768|sp|A4X5X2|RUVA_SALTO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|145303690|gb|ABP54272.1| Holliday junction DNA helicase subunit RuvA [Salinispora tropica
CNB-440]
Length = 200
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 17 LARIPGFGPRSARRATLHL 35
L R+PG G + A R L L
Sbjct: 109 LTRVPGIGKKGAERLVLEL 127
>gi|15924632|ref|NP_372166.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927222|ref|NP_374755.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus N315]
gi|21283321|ref|NP_646409.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MW2]
gi|49486475|ref|YP_043696.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MSSA476]
gi|148268122|ref|YP_001247065.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus JH9]
gi|150394190|ref|YP_001316865.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus JH1]
gi|156979960|ref|YP_001442219.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus Mu3]
gi|253317207|ref|ZP_04840420.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006427|ref|ZP_05145028.2| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|258453755|ref|ZP_05701730.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5937]
gi|269203267|ref|YP_003282536.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus ED98]
gi|282893146|ref|ZP_06301380.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8117]
gi|282928277|ref|ZP_06335882.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A10102]
gi|296275927|ref|ZP_06858434.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MR1]
gi|297207637|ref|ZP_06924072.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300911720|ref|ZP_07129163.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus TCH70]
gi|54039574|sp|P66749|RUVA_STAAN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|54039575|sp|P66750|RUVA_STAAW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|54042203|sp|P66748|RUVA_STAAM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|56749510|sp|Q6G8S7|RUVA_STAAS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166200268|sp|A7X358|RUVA_STAA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045773|sp|A6U2B0|RUVA_STAA2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045774|sp|A5ITG6|RUVA_STAA9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|13701440|dbj|BAB42734.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus
N315]
gi|14247414|dbj|BAB57804.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus
Mu50]
gi|21204761|dbj|BAB95457.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus
MW2]
gi|49244918|emb|CAG43379.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus MSSA476]
gi|147741191|gb|ABQ49489.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus
subsp. aureus JH9]
gi|149946642|gb|ABR52578.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus JH1]
gi|156722095|dbj|BAF78512.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus
Mu3]
gi|257864075|gb|EEV86828.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5937]
gi|262075557|gb|ACY11530.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus ED98]
gi|282590084|gb|EFB95166.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A10102]
gi|282764464|gb|EFC04590.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8117]
gi|285817324|gb|ADC37811.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus
04-02981]
gi|296887654|gb|EFH26552.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300885966|gb|EFK81168.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus
aureus subsp. aureus TCH70]
gi|312830028|emb|CBX34870.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129927|gb|EFT85917.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727620|gb|EGG64076.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp.
aureus 21172]
Length = 200
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
T E++ I+ L + PG G ++AR+ L L
Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127
>gi|332638256|ref|ZP_08417119.1| Holliday junction DNA helicase RuvA [Weissella cibaria KACC 11862]
Length = 199
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L + PG G ++A++ L L
Sbjct: 104 ITFLTKFPGIGKKTAQQIVLDL 125
>gi|322386106|ref|ZP_08059743.1| DNA helicase RecG [Streptococcus cristatus ATCC 51100]
gi|321269875|gb|EFX52798.1| DNA helicase RecG [Streptococcus cristatus ATCC 51100]
Length = 671
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 7/40 (17%)
Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMA 51
NL + L +PG GP+SA + K+ L L + +
Sbjct: 2 NLHQALTALPGVGPKSAEKF-------KKLGLESLQDLLL 34
>gi|296390675|ref|ZP_06880150.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAb1]
Length = 201
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRA 31
++G E++ L++ L +IPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERL 124
>gi|95931133|ref|ZP_01313858.1| Holliday junction DNA helicase RuvA [Desulfuromonas acetoxidans DSM
684]
gi|95132823|gb|EAT14497.1| Holliday junction DNA helicase RuvA [Desulfuromonas acetoxidans DSM
684]
Length = 199
Score = 34.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46
LA +PG G ++A R L L + + L
Sbjct: 109 LATLPGIGKKTADRLILEL----REKVRKL 134
>gi|26987951|ref|NP_743376.1| Holliday junction DNA helicase RuvA [Pseudomonas putida KT2440]
gi|148546488|ref|YP_001266590.1| Holliday junction DNA helicase RuvA [Pseudomonas putida F1]
gi|37999646|sp|Q88NJ1|RUVA_PSEPK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230586|sp|A5VZU6|RUVA_PSEP1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|24982663|gb|AAN66840.1|AE016312_11 Holliday junction DNA helicase RuvA [Pseudomonas putida KT2440]
gi|148510546|gb|ABQ77406.1| Holliday junction DNA helicase subunit RuvA [Pseudomonas putida F1]
gi|313497567|gb|ADR58933.1| RuvA [Pseudomonas putida BIRD-1]
Length = 205
Score = 34.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L R+PG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALVRVPGVGKKTAERL 124
>gi|239637553|ref|ZP_04678525.1| holliday junction DNA helicase RuvA [Staphylococcus warneri L37603]
gi|239596771|gb|EEQ79296.1| holliday junction DNA helicase RuvA [Staphylococcus warneri L37603]
Length = 200
Score = 34.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
T E++ I+ L + PG G ++AR+ L L K K Q+ ++ + N+ N
Sbjct: 93 TPNEVKQAIENENDTYLTKFPGIGKKTARQIVLDL-KGKVQITEENSDTLLNVMND 147
>gi|76800945|ref|YP_325953.1| DNA mismatch repair protein MutS-like protein [Natronomonas
pharaonis DSM 2160]
gi|76556810|emb|CAI48384.1| DNA mismatch repair protein MutS homolog [Natronomonas pharaonis
DSM 2160]
Length = 667
Score = 34.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 15 KILARIPGFGPRSARRAT 32
+ L IPG G ++A R
Sbjct: 4 EELEAIPGVGEKTAERLA 21
>gi|86152153|ref|ZP_01070365.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315124320|ref|YP_004066324.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840938|gb|EAQ58188.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315018042|gb|ADT66135.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 183
Score = 34.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 17 LARIPGFGPRSARRATLHLVKKK-------EQLLGPLAEAMA 51
L ++PG GP+SA+R + L K + LA +
Sbjct: 110 LKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLT 151
>gi|160871606|ref|ZP_02061738.1| holliday junction DNA helicase RuvA [Rickettsiella grylli]
gi|159120405|gb|EDP45743.1| holliday junction DNA helicase RuvA [Rickettsiella grylli]
Length = 199
Score = 34.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK 56
+ L +PG G ++A R +++ L L+ I +K
Sbjct: 108 VNSLQAVPGIGKKTAERL---IIEM-RDRLRNLSHNQPEILDK 146
>gi|57237644|ref|YP_178892.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni RM1221]
gi|86153371|ref|ZP_01071575.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|121613230|ref|YP_001000488.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 81-176]
gi|157415070|ref|YP_001482326.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 81116]
gi|205356769|ref|ZP_03223528.1| putative Holliday junction DNA helicase [Campylobacter jejuni
subsp. jejuni CG8421]
gi|73621848|sp|Q5HUZ3|RUVA_CAMJR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230537|sp|A1VZE7|RUVA_CAMJJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|172047113|sp|A8FLL2|RUVA_CAMJ8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|57166448|gb|AAW35227.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni RM1221]
gi|85843097|gb|EAQ60308.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87249483|gb|EAQ72443.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 81-176]
gi|157386034|gb|ABV52349.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 81116]
gi|205345336|gb|EDZ31980.1| putative Holliday junction DNA helicase [Campylobacter jejuni
subsp. jejuni CG8421]
gi|307747711|gb|ADN90981.1| Holliday junction ATP-dependent DNA helicase ruvA [Campylobacter
jejuni subsp. jejuni M1]
gi|315058253|gb|ADT72582.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni S3]
gi|315931217|gb|EFV10189.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
jejuni 327]
Length = 183
Score = 34.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 17 LARIPGFGPRSARRATLHLVKKK-------EQLLGPLAEAMA 51
L ++PG GP+SA+R + L K + LA +
Sbjct: 110 LKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLT 151
>gi|167035195|ref|YP_001670426.1| Holliday junction DNA helicase RuvA [Pseudomonas putida GB-1]
gi|189045762|sp|B0KTJ3|RUVA_PSEPG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166861683|gb|ABZ00091.1| Holliday junction DNA helicase RuvA [Pseudomonas putida GB-1]
Length = 205
Score = 34.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L R+PG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALVRVPGVGKKTAERL 124
>gi|49082750|gb|AAT50775.1| PA0966 [synthetic construct]
Length = 202
Score = 34.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRA 31
++G E++ L++ L +IPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERL 124
>gi|302389101|ref|YP_003824922.1| CRISPR-associated protein, Csm1 family [Thermosediminibacter oceani
DSM 16646]
gi|302199729|gb|ADL07299.1| CRISPR-associated protein, Csm1 family [Thermosediminibacter oceani
DSM 16646]
Length = 788
Score = 34.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Query: 54 YNKVCLCSICGNVDTTDPCAICIDQQRDASVII----VVEDVA 92
K C CGN D C C +R +I +VE+
Sbjct: 406 KEKGEPCPHCGNPVKEDECPFCRSFERLGENLIKKKFLVEEWK 448
>gi|150390102|ref|YP_001320151.1| Holliday junction DNA helicase RuvA [Alkaliphilus metalliredigens
QYMF]
gi|167012654|sp|A6TQM4|RUVA_ALKMQ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|149949964|gb|ABR48492.1| Holliday junction DNA helicase RuvA [Alkaliphilus metalliredigens
QYMF]
Length = 194
Score = 34.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 15 KILARIPGFGPRSARRATLHL 35
+ +A+ PG G ++A R L L
Sbjct: 107 QAIAKSPGVGKKTAERMILEL 127
>gi|226311476|ref|YP_002771370.1| histidyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|226094424|dbj|BAH42866.1| histidyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 424
Score = 34.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 101 KAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELI------FAISATIEGQT 154
N L LGG + IG + I+ L+ +E + ++ I F + T E +T
Sbjct: 287 GRYNGLVAELGG--DDMPGIG-FALSIERLLLALEKQGVQLPISGGIDCFVVVQTPEAKT 343
Query: 155 TAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGT---IFEA--IRSR 198
TA ++D+L+ + +ELDYLD + +A +++R
Sbjct: 344 TAFVLVDQLRQAGIA-----------AELDYLDRKMKAQLKQADRLQAR 381
>gi|325274574|ref|ZP_08140632.1| Holliday junction DNA helicase RuvA [Pseudomonas sp. TJI-51]
gi|324100301|gb|EGB98089.1| Holliday junction DNA helicase RuvA [Pseudomonas sp. TJI-51]
Length = 205
Score = 34.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L R+PG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSALVRVPGVGKKTAERL 124
>gi|284161871|ref|YP_003400494.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
gi|284011868|gb|ADB57821.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
Length = 290
Score = 34.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 42 LLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75
+ LA+++ +V C ICG V + C+ C
Sbjct: 246 GIVKLAKSVKAEEWEVKHCKICGEVSNFEICSFC 279
>gi|193076712|gb|ABO11417.2| multifunctional protein [Acinetobacter baumannii ATCC 17978]
Length = 186
Score = 34.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 109 VLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162
+LG S+S I PE +Q L +R++ + ++ ++A++ G+TT+ +
Sbjct: 10 ILGDSISAGYGIDPEQGWVQLLQKRLDQQYPKQHKV-VNASVSGETTSGALARL 62
>gi|126641035|ref|YP_001084019.1| multifunctional protein [Acinetobacter baumannii ATCC 17978]
Length = 189
Score = 34.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 109 VLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162
+LG S+S I PE +Q L +R++ + ++ ++A++ G+TT+ +
Sbjct: 13 ILGDSISAGYGIDPEQGWVQLLQKRLDQQYPKQHKV-VNASVSGETTSGALARL 65
>gi|161936318|ref|YP_129329.2| Holliday junction DNA helicase RuvA [Photobacterium profundum SS9]
gi|90135510|sp|Q6LT49|RUVA_PHOPR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
Length = 206
Score = 34.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
I L +IPG G ++A R
Sbjct: 107 ITTLVKIPGVGKKTAERLV 125
>gi|187931869|ref|YP_001891854.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp.
mediasiatica FSC147]
gi|229560033|sp|B2SH67|RUVA_FRATM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|187712778|gb|ACD31075.1| holliday junction DNA helicase, subunit A [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 216
Score = 34.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLH----LVKKKEQ 41
+ K + + I+ +LA +PG G ++A R + L+K +
Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVIEIYDKLLKMANE 138
>gi|90580117|ref|ZP_01235925.1| Holliday junction DNA helicase motor protein [Vibrio angustum S14]
gi|90439002|gb|EAS64185.1| Holliday junction DNA helicase motor protein [Vibrio angustum S14]
Length = 207
Score = 34.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKE-----QLLGPLAEAMANIYNK 56
+ + E+E+ + L +IPG G ++A R V+ K+ A+ +
Sbjct: 96 SQFVRSVELED-VTTLVKIPGVGKKTAERLV---VEMKDRLKGWGEGDLFTPALDTAASN 151
>gi|330502219|ref|YP_004379088.1| Holliday junction DNA helicase RuvA [Pseudomonas mendocina NK-01]
gi|328916505|gb|AEB57336.1| Holliday junction DNA helicase RuvA [Pseudomonas mendocina NK-01]
Length = 202
Score = 34.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31
++G E++ L++ L ++PG G ++A R
Sbjct: 91 MSGLEVDELVRCVQAQDTAALVKVPGVGKKTAERL 125
>gi|147919262|ref|YP_687002.1| holliday junction resolvasome, DNA-binding subunit [uncultured
methanogenic archaeon RC-I]
gi|110622398|emb|CAJ37676.1| holliday junction resolvasome, DNA-binding subunit [uncultured
methanogenic archaeon RC-I]
Length = 201
Score = 34.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 8 KEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
+EI I K L R+ G G ++A+R L L + + L M + +V
Sbjct: 99 EEIAEAIVTEDLKTLTRMNGVGKKTAQRLVLEL----KDKVAKL-RIMHHAKKQVK 149
>gi|15596163|ref|NP_249657.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1]
gi|107100423|ref|ZP_01364341.1| hypothetical protein PaerPA_01001448 [Pseudomonas aeruginosa PACS2]
gi|116048891|ref|YP_792308.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152985106|ref|YP_001349891.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PA7]
gi|218893063|ref|YP_002441932.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa LESB58]
gi|254239314|ref|ZP_04932637.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa C3719]
gi|254245249|ref|ZP_04938571.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa 2192]
gi|313105853|ref|ZP_07792116.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa 39016]
gi|2498872|sp|Q51425|RUVA_PSEAE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|122257998|sp|Q02IC8|RUVA_PSEAB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|166230585|sp|A6VA06|RUVA_PSEA7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|226725446|sp|B7UXW6|RUVA_PSEA8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|9946873|gb|AAG04355.1|AE004530_8 Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1]
gi|1183841|dbj|BAA11818.1| Holliday junction binding protein [Pseudomonas aeruginosa]
gi|115584112|gb|ABJ10127.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126171245|gb|EAZ56756.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa C3719]
gi|126198627|gb|EAZ62690.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa 2192]
gi|150960264|gb|ABR82289.1| holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PA7]
gi|218773291|emb|CAW29103.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa LESB58]
gi|310878618|gb|EFQ37212.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa 39016]
Length = 201
Score = 34.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRA 31
++G E++ L++ L +IPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERL 124
>gi|197119744|ref|YP_002140171.1| cytochrome c [Geobacter bemidjiensis Bem]
gi|197089104|gb|ACH40375.1| cytochrome c [Geobacter bemidjiensis Bem]
Length = 231
Score = 34.9 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 25 PRSARRATLHLVK--KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75
P+ + R HL+ +Q L E + C C D C C
Sbjct: 143 PKGSLRIKSHLMLGPNNQQYAPALGEHAIEARRNLQSCQTCH--PEGDVCIQC 193
>gi|327475176|gb|AEA77183.1| holliday junction DNA helicase [Exiguobacterium sp. EPVM]
Length = 195
Score = 34.9 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35
+ +++ LI L + PG G ++A++ L L
Sbjct: 88 VASGDMDALIDAIETENEKYLTKFPGVGKKTAKQMALDL 126
>gi|224418856|ref|ZP_03656862.1| Holliday junction DNA helicase RuvA [Helicobacter canadensis MIT
98-5491]
gi|253828156|ref|ZP_04871041.1| Holliday junction DNA helicase motor protein [Helicobacter
canadensis MIT 98-5491]
gi|313142373|ref|ZP_07804566.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter
canadensis MIT 98-5491]
gi|253511562|gb|EES90221.1| Holliday junction DNA helicase motor protein [Helicobacter
canadensis MIT 98-5491]
gi|313131404|gb|EFR49021.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter
canadensis MIT 98-5491]
Length = 191
Score = 34.9 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRA 31
T + +++ + R+PG GP+SA R
Sbjct: 94 YTPQTFAKVVEGNDIKSMQRVPGIGPKSAGRI 125
>gi|171185906|ref|YP_001794825.1| PP-loop domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170935118|gb|ACB40379.1| PP-loop domain protein [Thermoproteus neutrophilus V24Sta]
Length = 329
Score = 34.9 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 43 LGPLAEAMAN--IYNKVCLCSICGNVDTTDPCAIC 75
L+ A+ + C CG V D C +C
Sbjct: 273 GEKLSNALREPQGAKSLRRCKYCGAVSPRDICRVC 307
>gi|150400428|ref|YP_001324195.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
gi|150013131|gb|ABR55583.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
Length = 356
Score = 34.9 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28
+K K I N I L ++PG G ++A
Sbjct: 107 EKYNSK-IPNSIDELVKLPGVGRKTA 131
>gi|113866527|ref|YP_725016.1| Holliday junction DNA helicase RuvA [Ralstonia eutropha H16]
gi|123033276|sp|Q0KEC3|RUVA_RALEH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|113525303|emb|CAJ91648.1| holliday junction resolvasome, DNA-binding subunit RuvA [Ralstonia
eutropha H16]
Length = 193
Score = 34.9 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30
++ E+ I + L RIPG G ++A R
Sbjct: 93 MSVPELAQAITLQEAGRLTRIPGIGKKTAER 123
>gi|262373115|ref|ZP_06066394.1| Holliday junction DNA helicase RuvA [Acinetobacter junii SH205]
gi|262313140|gb|EEY94225.1| Holliday junction DNA helicase RuvA [Acinetobacter junii SH205]
Length = 201
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
I L ++PG G ++A R + L L+++
Sbjct: 106 INTLIKVPGVGKKTAERLMIEL----RDRFKALSQS 137
>gi|238921830|ref|YP_002935344.1| hypothetical protein EUBELI_20063 [Eubacterium eligens ATCC 27750]
gi|238873502|gb|ACR73210.1| Hypothetical protein EUBELI_20063 [Eubacterium eligens ATCC 27750]
Length = 485
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 15 KILARIPGFGPRSARRAT 32
+L RIPG GP+SA+R
Sbjct: 396 DMLLRIPGVGPKSAKRIV 413
>gi|237807578|ref|YP_002892018.1| DNA-directed DNA polymerase [Tolumonas auensis DSM 9187]
gi|237499839|gb|ACQ92432.1| DNA-directed DNA polymerase [Tolumonas auensis DSM 9187]
Length = 351
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 16 ILARIPGFGPRSARRAT 32
L++IPG G ++A R
Sbjct: 177 ALSKIPGIGGKTAERLV 193
>gi|149927724|ref|ZP_01915976.1| Holliday junction DNA helicase motor protein [Limnobacter sp.
MED105]
gi|149823550|gb|EDM82780.1| Holliday junction DNA helicase motor protein [Limnobacter sp.
MED105]
Length = 196
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 7 GKEIENLIKILARIPGFGPRSARRATLHL 35
+E L+ +IPG G ++A R L L
Sbjct: 104 SQETARLV----KIPGIGKKTAERLLLEL 128
>gi|91776705|ref|YP_546461.1| Holliday junction DNA helicase RuvA [Methylobacillus flagellatus
KT]
gi|123253965|sp|Q1GYR7|RUVA_METFK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|91710692|gb|ABE50620.1| Holliday junction DNA helicase RuvA [Methylobacillus flagellatus
KT]
Length = 194
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMA 51
+L ++PG G ++A R L++ K++ A+A
Sbjct: 109 LLIKVPGIGKKTAERL---LLELKDKFAIDGGTALA 141
>gi|242780797|ref|XP_002479670.1| HhH-GPD family base excision DNA repair protein [Talaromyces
stipitatus ATCC 10500]
gi|218719817|gb|EED19236.1| HhH-GPD family base excision DNA repair protein [Talaromyces
stipitatus ATCC 10500]
Length = 407
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKK 39
E + L + PG GP++A L +++
Sbjct: 315 EEAMLELIKFPGIGPKTAACVVLFCLQRP 343
>gi|145590058|ref|YP_001156655.1| Holliday junction DNA helicase RuvA [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|189045760|sp|A4T027|RUVA_POLSQ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|145048464|gb|ABP35091.1| Holliday junction DNA helicase RuvA [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 193
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35
++ E+ I + L ++PG G ++A R L L
Sbjct: 93 MSVNELAQAIALQEAGRLTQVPGIGKKTAERLCLEL 128
>gi|58336747|ref|YP_193332.1| Holliday junction DNA helicase RuvA [Lactobacillus acidophilus
NCFM]
gi|227903308|ref|ZP_04021113.1| helicase Holliday junction [Lactobacillus acidophilus ATCC 4796]
gi|75358012|sp|Q5FLX3|RUVA_LACAC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|58254064|gb|AAV42301.1| helicase Holliday junction [Lactobacillus acidophilus NCFM]
gi|227868937|gb|EEJ76358.1| helicase Holliday junction [Lactobacillus acidophilus ATCC 4796]
Length = 195
Score = 34.9 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 16/62 (25%)
Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL----------VKKKEQLLGPLAEAMA 51
+ I+ L R PG G ++A + L L + K E ++ A+
Sbjct: 92 SNSLAEAIEQGEVKYLTRFPGVGKKTASQIVLDLKGKLGDYVARLDKPENG-EEISPALN 150
Query: 52 NI 53
+
Sbjct: 151 DA 152
>gi|330445532|ref|ZP_08309184.1| Holliday junction DNA helicase RuvA [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489723|dbj|GAA03681.1| Holliday junction DNA helicase RuvA [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 207
Score = 34.6 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKE-----QLLGPLAEAMANIYNK 56
+ + E+E+ + L +IPG G ++A R V+ K+ A+ +
Sbjct: 96 SQFVRSVELED-VTTLVKIPGVGKKTAERLV---VEMKDRLKGWGEGDLFTPALDTAASN 151
>gi|154174555|ref|YP_001408214.1| Holliday junction DNA helicase RuvA [Campylobacter curvus 525.92]
gi|166230533|sp|A7GYC2|RUVA_CAMC5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|112802462|gb|EAT99806.1| holliday junction DNA helicase RuvA [Campylobacter curvus 525.92]
Length = 184
Score = 34.6 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 5/34 (14%)
Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRA 31
++ N + +PG GP++ARR
Sbjct: 91 SSLSPNAFSNAVINGDADTFKSVPGIGPKTARRI 124
>gi|313888293|ref|ZP_07821964.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845696|gb|EFR33086.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 180
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 12/57 (21%)
Query: 28 ARRATLHLVKKKEQLLGPLAEAMANI-------YNKVCLCSICGNVD--TTDPCAIC 75
A R +E A A + + LC +CG + D C IC
Sbjct: 117 AMRFA---TAAEEVHAKRFATAKEAVDAGKDLDVENIYLCPVCGYISFEEEDKCPIC 170
>gi|162448567|ref|YP_001610934.1| holliday junction DNA helicase [Sorangium cellulosum 'So ce 56']
gi|161159149|emb|CAN90454.1| holliday junction DNA helicase [Sorangium cellulosum 'So ce 56']
Length = 244
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 17 LARIPGFGPRSARRATLHL 35
L IPG G ++A R L L
Sbjct: 154 LTAIPGVGKKTAERLVLEL 172
>gi|88811437|ref|ZP_01126692.1| Holliday junction DNA helicase motor protein [Nitrococcus mobilis
Nb-231]
gi|88791326|gb|EAR22438.1| Holliday junction DNA helicase motor protein [Nitrococcus mobilis
Nb-231]
Length = 203
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 16 ILARIPGFGPRSARRA 31
L R+PG G ++A R
Sbjct: 109 ALIRLPGVGKKTAERL 124
>gi|315656670|ref|ZP_07909557.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|315492625|gb|EFU82229.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 194
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L IPG G +SA R L +
Sbjct: 106 VAALQGIPGVGKKSAERMILEI 127
>gi|315655417|ref|ZP_07908317.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
curtisii ATCC 51333]
gi|315490357|gb|EFU79982.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
curtisii ATCC 51333]
Length = 194
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L IPG G +SA R L +
Sbjct: 106 VAALQGIPGVGKKSAERMILEI 127
>gi|298346872|ref|YP_003719559.1| Holliday junction DNA helicase motor protein [Mobiluncus curtisii
ATCC 43063]
gi|304389423|ref|ZP_07371386.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|298236933|gb|ADI68065.1| Holliday junction DNA helicase motor protein [Mobiluncus curtisii
ATCC 43063]
gi|304327233|gb|EFL94468.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 194
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L IPG G +SA R L +
Sbjct: 106 VAALQGIPGVGKKSAERMILEI 127
>gi|188591242|ref|YP_001795842.1| holliday junction DNA helicase ruva [Cupriavidus taiwanensis LMG
19424]
gi|229560026|sp|B2AH73|RUVA_CUPTR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|170938136|emb|CAP63122.1| subunit A of RuvABC Holliday junction resolvasome, regulatory
subunit [Cupriavidus taiwanensis LMG 19424]
Length = 193
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30
++ E+ I + L RIPG G ++A R
Sbjct: 93 MSVPELAQAITLQEAGRLTRIPGIGKKTAER 123
>gi|113460415|ref|YP_718477.1| Holliday junction DNA helicase RuvA [Haemophilus somnus 129PT]
gi|170717663|ref|YP_001783495.1| Holliday junction DNA helicase RuvA [Haemophilus somnus 2336]
gi|123131938|sp|Q0I1M4|RUVA_HAES1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|189045755|sp|B0UVK3|RUVA_HAES2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|112822458|gb|ABI24547.1| Holliday junction DNA helicase subunit RuvA [Haemophilus somnus
129PT]
gi|168825792|gb|ACA31163.1| Holliday junction DNA helicase RuvA [Haemophilus somnus 2336]
Length = 204
Score = 34.6 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 8 KEIENLIKILARIPGFGPRSARRA 31
+E+ L+ +IPG G ++A R
Sbjct: 105 EELSKLV----KIPGVGKKTAERL 124
>gi|312143984|ref|YP_003995430.1| Holliday junction DNA helicase RuvA [Halanaerobium sp.
'sapolanicus']
gi|311904635|gb|ADQ15076.1| Holliday junction DNA helicase RuvA [Halanaerobium sp.
'sapolanicus']
Length = 200
Score = 34.6 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 11 ENLIKILARIPGFGPRSARRATLHL 35
L+ L +I G GP++A+R L L
Sbjct: 104 NELV--LKKISGIGPKTAQRLILEL 126
>gi|119358442|ref|YP_913086.1| FtsH-2 peptidase [Chlorobium phaeobacteroides DSM 266]
gi|119355791|gb|ABL66662.1| membrane protease FtsH catalytic subunit [Chlorobium
phaeobacteroides DSM 266]
Length = 694
Score = 34.6 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 28 ARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62
ARR ++ + L LA + + C I
Sbjct: 595 ARRMVFEMLTANREKLERLATELL-AREMLQYCQI 628
>gi|6729740|pdb|1BVS|A Chain A, Ruva Complexed To A Holliday Junction.
gi|6729741|pdb|1BVS|B Chain B, Ruva Complexed To A Holliday Junction.
gi|6729742|pdb|1BVS|C Chain C, Ruva Complexed To A Holliday Junction.
gi|6729743|pdb|1BVS|D Chain D, Ruva Complexed To A Holliday Junction.
gi|6729744|pdb|1BVS|E Chain E, Ruva Complexed To A Holliday Junction.
gi|6729745|pdb|1BVS|F Chain F, Ruva Complexed To A Holliday Junction.
gi|6729746|pdb|1BVS|G Chain G, Ruva Complexed To A Holliday Junction.
gi|6729747|pdb|1BVS|H Chain H, Ruva Complexed To A Holliday Junction
Length = 203
Score = 34.6 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 14 IKILARIPGFGPRSARRATLHLVKK 38
+ L R+PG G R A R L L K
Sbjct: 106 VASLTRVPGIGRRGAERIVLELADK 130
>gi|312143800|ref|YP_003995246.1| PHP domain protein [Halanaerobium sp. 'sapolanicus']
gi|311904451|gb|ADQ14892.1| PHP domain protein [Halanaerobium sp. 'sapolanicus']
Length = 575
Score = 34.6 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54
+ IPG GP++A R L + L L A+
Sbjct: 95 EMTNIPGLGPKTAHRFYYEL---GIEDLISLENALKEAK 130
>gi|311694932|gb|ADP97805.1| Holliday junction ATP-dependent DNA helicase RuvA [marine bacterium
HP15]
Length = 209
Score = 34.6 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 16 ILARIPGFGPRSARRATLHLVKK 38
L ++PG G ++A R L++
Sbjct: 109 SLVKLPGVGKKTAERL---LIEM 128
>gi|218295957|ref|ZP_03496737.1| protein of unknown function DUF721 [Thermus aquaticus Y51MC23]
gi|218243695|gb|EED10223.1| protein of unknown function DUF721 [Thermus aquaticus Y51MC23]
Length = 252
Score = 34.6 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 28 ARRATLHLVKK-KEQLLGPLAEAMANI--YNKVCLCSICGNVDTTDPCAICI 76
A R L L +K ++ +A A + + C IC T PC C
Sbjct: 114 AGRKALELAQKAPPEMREAVARAALALFGRQRGSPCPICQTPSETHPCPTCR 165
>gi|331697370|ref|YP_004333609.1| Holliday junction ATP-dependent DNA helicase ruvA [Pseudonocardia
dioxanivorans CB1190]
gi|326952059|gb|AEA25756.1| Holliday junction ATP-dependent DNA helicase ruvA [Pseudonocardia
dioxanivorans CB1190]
Length = 199
Score = 34.6 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L RIPG G +SA R + L
Sbjct: 109 LTRIPGVGRKSAERLVVEL 127
>gi|146283144|ref|YP_001173297.1| Holliday junction DNA helicase RuvA [Pseudomonas stutzeri A1501]
gi|166230587|sp|A4VNA4|RUVA_PSEU5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|145571349|gb|ABP80455.1| Holliday junction DNA helicase RuvA [Pseudomonas stutzeri A1501]
gi|327481497|gb|AEA84807.1| Holliday junction DNA helicase RuvA [Pseudomonas stutzeri DSM 4166]
Length = 201
Score = 34.6 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRA 31
++G E++ L++ L RIPG G ++A R
Sbjct: 90 MSGLEVDELVRCVQAQDTSVLVRIPGVGKKTAERL 124
>gi|89075787|ref|ZP_01162175.1| Holliday junction DNA helicase motor protein [Photobacterium sp.
SKA34]
gi|89048519|gb|EAR54094.1| Holliday junction DNA helicase motor protein [Photobacterium sp.
SKA34]
Length = 207
Score = 34.6 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRAT 32
+ + E+E+ + L +IPG G ++A R
Sbjct: 96 SQFVRSVELED-VTTLVKIPGVGKKTAERLV 125
>gi|167769432|ref|ZP_02441485.1| hypothetical protein ANACOL_00762 [Anaerotruncus colihominis DSM
17241]
gi|167668400|gb|EDS12530.1| hypothetical protein ANACOL_00762 [Anaerotruncus colihominis DSM
17241]
Length = 214
Score = 34.6 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M + E+ + ++ L ++PG G ++A
Sbjct: 96 MLMEKYNGELPDTVEELTKLPGIGRKTA 123
>gi|315037644|ref|YP_004031212.1| Holliday junction DNA helicase RuvA [Lactobacillus amylovorus GRL
1112]
gi|325956129|ref|YP_004286739.1| Holliday junction DNA helicase RuvA [Lactobacillus acidophilus
30SC]
gi|312275777|gb|ADQ58417.1| Holliday junction DNA helicase RuvA [Lactobacillus amylovorus GRL
1112]
gi|325332694|gb|ADZ06602.1| Holliday junction DNA helicase RuvA [Lactobacillus acidophilus
30SC]
gi|327182937|gb|AEA31384.1| Holliday junction DNA helicase RuvA [Lactobacillus amylovorus GRL
1118]
Length = 195
Score = 34.6 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 16/62 (25%)
Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL----------VKKKEQLLGPLAEAMA 51
+ I+ L R PG G ++A + L L + +K+ ++ A+
Sbjct: 92 SNSLAEAIEQGEVKYLTRFPGVGKKTASQIVLDLKGKLGDYVARLDRKDND-EEISPALN 150
Query: 52 NI 53
+
Sbjct: 151 DA 152
>gi|91785164|ref|YP_560370.1| Holliday junction DNA helicase motor protein [Burkholderia
xenovorans LB400]
gi|296157351|ref|ZP_06840187.1| Holliday junction DNA helicase RuvA [Burkholderia sp. Ch1-1]
gi|123358465|sp|Q13UC1|RUVA_BURXL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|91689118|gb|ABE32318.1| DNA recombination protein, RuvA [Burkholderia xenovorans LB400]
gi|295892687|gb|EFG72469.1| Holliday junction DNA helicase RuvA [Burkholderia sp. Ch1-1]
Length = 193
Score = 34.6 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L R+PG G ++A R L L
Sbjct: 110 LTRVPGIGKKTAERLLLEL 128
>gi|294101862|ref|YP_003553720.1| Holliday junction DNA helicase RuvA [Aminobacterium colombiense DSM
12261]
gi|293616842|gb|ADE56996.1| Holliday junction DNA helicase RuvA [Aminobacterium colombiense DSM
12261]
Length = 201
Score = 34.6 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 15 KILARIPGFGPRSARRATLHLVKK-KEQLLGPLAE 48
++PG G ++A R L + E++L AE
Sbjct: 107 DTFLQVPGVGKKTAERLCFELKRHLSEEMLAEFAE 141
>gi|187925318|ref|YP_001896960.1| Holliday junction DNA helicase RuvA [Burkholderia phytofirmans
PsJN]
gi|229560013|sp|B2SYK1|RUVA_BURPP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|187716512|gb|ACD17736.1| Holliday junction DNA helicase RuvA [Burkholderia phytofirmans
PsJN]
Length = 193
Score = 34.6 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L R+PG G ++A R L L
Sbjct: 110 LTRVPGIGKKTAERLLLEL 128
>gi|15669347|ref|NP_248152.1| hypothetical protein MJ_1157 [Methanocaldococcus jannaschii DSM
2661]
gi|2501587|sp|Q58558|Y1157_METJA RecName: Full=CTU1/ATPBD3 family protein MJ1157
gi|1592323|gb|AAB99161.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 341
Score = 34.6 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 51 ANIYNKVCLCSICGNVDTTDPCAICI 76
N+ ++ C ICG + + C +C
Sbjct: 307 LNVKEEIRRCEICGFPCSGNICKVCS 332
>gi|15669820|ref|NP_248634.1| hypothetical protein MJ_1624 [Methanocaldococcus jannaschii DSM
2661]
gi|1592338|gb|AAB99642.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 139
Score = 34.6 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
I+VE D+ +LE+ + ++ P + L+ K+++E+I
Sbjct: 37 IIVEGKRDVESLEKLGV-EGTFIIIA--------KTPIYLIADELVR----KRVKEVILL 83
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKI-TRLAY 175
G+ A I+++ + +K+ T++ +
Sbjct: 84 TDFDRRGRMLAKAIIEEFRHRGIKVNTKIRH 114
>gi|285019624|ref|YP_003377335.1| DNA topoisomerase [Xanthomonas albilineans GPE PC73]
gi|283474842|emb|CBA17341.1| putative dna topoisomerase protein [Xanthomonas albilineans]
Length = 831
Score = 34.6 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 31/102 (30%), Gaps = 21/102 (20%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVL------------GGSLSPLDRIGPEDIGIQSLI 131
+++VE A + +HVL G++ P D I
Sbjct: 5 LLIVESPAKAKTI---NKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIDKNE 61
Query: 132 ERIEVKKIREL-----IFAISATIEGQTTAHYIMDKLKGIDV 168
+ ++ A EG+ + +I + L+ +
Sbjct: 62 KHVDAIAKAAKAADDIYLATDPDREGEAISWHIAEILQERGL 103
>gi|212550403|ref|YP_002308720.1| endonuclease III [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548641|dbj|BAG83309.1| endonuclease III [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 217
Score = 34.6 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 14 IKILARIPGFGPRSA 28
IK L ++PG G ++A
Sbjct: 109 IKELMKLPGVGRKTA 123
>gi|293402068|ref|ZP_06646207.1| stress response protein NST1 [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304460|gb|EFE45710.1| stress response protein NST1 [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 338
Score = 34.6 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 9/53 (16%)
Query: 58 CLCSICGNVDTTDPCAIC------IDQQRDASVIIVVEDVADLWALERSKAVN 104
C CG C IC I ++ + +VED D+ + E +
Sbjct: 6 RYCPSCGAKTNDAVCEICGRHTKPISERYHEKNLYIVED--DIASNEE-RQYR 55
>gi|260102901|ref|ZP_05753138.1| crossover junction endoribonuclease subunit A [Lactobacillus
helveticus DSM 20075]
gi|260083290|gb|EEW67410.1| crossover junction endoribonuclease subunit A [Lactobacillus
helveticus DSM 20075]
Length = 196
Score = 34.6 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPL 46
+ I+ L R PG G ++A + L L K + L
Sbjct: 92 ANSLAEAIEQGEVKYLTRFPGVGKKTASQIVLDLKGKLRDYVARL 136
>gi|329945621|ref|ZP_08293354.1| Holliday junction DNA helicase RuvA, N terminal domain protein
[Actinomyces sp. oral taxon 170 str. F0386]
gi|328528624|gb|EGF55589.1| Holliday junction DNA helicase RuvA, N terminal domain protein
[Actinomyces sp. oral taxon 170 str. F0386]
Length = 218
Score = 34.6 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 14 IKILARIPGFGPRSARRATLHLVKK-------KEQLLGPLAEAMAN 52
+ L R+PG GP+ A+R L + K P A+A+ +
Sbjct: 106 VAALTRVPGLGPKGAQRVILDVADKLGPVTGDDADTAMPAAKAIGD 151
>gi|239945712|ref|ZP_04697649.1| putative iron-sulfur protein [Streptomyces roseosporus NRRL 15998]
gi|239992182|ref|ZP_04712846.1| putative iron-sulfur protein [Streptomyces roseosporus NRRL 11379]
gi|291449171|ref|ZP_06588561.1| iron-sulfur cluster binding protein [Streptomyces roseosporus NRRL
15998]
gi|291352118|gb|EFE79022.1| iron-sulfur cluster binding protein [Streptomyces roseosporus NRRL
15998]
Length = 516
Score = 34.6 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
HLV LA+A+ CS C NV
Sbjct: 306 FHLVLLDNGRTAALADAIGRAALNCIRCSACLNVC 340
>gi|326791465|ref|YP_004309286.1| Holliday junction DNA helicase RuvA [Clostridium lentocellum DSM
5427]
gi|326542229|gb|ADZ84088.1| Holliday junction DNA helicase RuvA [Clostridium lentocellum DSM
5427]
Length = 197
Score = 34.6 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35
+ +E+ +I K L+++ G GP++A+R L L
Sbjct: 93 YSSQEVIEIILNQDSKALSKVSGIGPKTAQRIILEL 128
>gi|282600689|ref|ZP_05979453.2| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
gi|282571389|gb|EFB76924.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
Length = 470
Score = 34.6 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 16 ILARIPGFGPRSARRAT 32
L R+PG GP+SA R
Sbjct: 349 ELLRVPGIGPKSATRIV 365
>gi|148263061|ref|YP_001229767.1| hypothetical protein Gura_0988 [Geobacter uraniireducens Rf4]
gi|146396561|gb|ABQ25194.1| hypothetical protein Gura_0988 [Geobacter uraniireducens Rf4]
Length = 233
Score = 34.6 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 4/57 (7%)
Query: 25 PRSARRATLHLVKKKEQLLGPLA--EAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79
P+ R HL+ + + A E + C C D C C +
Sbjct: 143 PKGKLRIKSHLMSGPDHQVYRFAVNEHATEARRNLQSCQTCH--PDGDVCIQCHSAK 197
>gi|294782267|ref|ZP_06747593.1| LOW QUALITY PROTEIN: DNA topoisomerase [Fusobacterium sp.
1_1_41FAA]
gi|294480908|gb|EFG28683.1| LOW QUALITY PROTEIN: DNA topoisomerase [Fusobacterium sp.
1_1_41FAA]
Length = 756
Score = 34.6 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 19/101 (18%)
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL------------DRIGPEDIGIQ 128
D + +++VE A +E+ + + Y V+ + D P + I+
Sbjct: 9 DKNKLVIVESPAKAKTIEK--ILGSSYKVISSYGHIIDLPKTKIGVDVKDNFKPSYLTIK 66
Query: 129 SLIERIEVKKIR-----ELIFAISATIEGQTTAHYIMDKLK 164
E I+ K E+ A EG++ A +I + LK
Sbjct: 67 GKGEVIKKLKEAAKKADEIYLASDPDREGESIAWHIANTLK 107
>gi|262276112|ref|ZP_06053921.1| holliday junction DNA helicase RuvA [Grimontia hollisae CIP 101886]
gi|262219920|gb|EEY71236.1| holliday junction DNA helicase RuvA [Grimontia hollisae CIP 101886]
Length = 209
Score = 34.6 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 14 IKILARIPGFGPRSARRAT 32
+ L +IPG G ++A R
Sbjct: 107 VSTLVKIPGVGKKTAERLV 125
>gi|260913921|ref|ZP_05920395.1| DNA-directed DNA polymerase IV [Pasteurella dagmatis ATCC 43325]
gi|260632008|gb|EEX50185.1| DNA-directed DNA polymerase IV [Pasteurella dagmatis ATCC 43325]
Length = 357
Score = 34.6 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 5 ITGKEIENLIKIL--ARIPGFGPRSARRAT 32
I +E+ + IK L +IPG G +A+R
Sbjct: 166 IKPEEVTDFIKKLPLKKIPGVGKVTAQRLA 195
>gi|262278158|ref|ZP_06055943.1| Holliday junction helicase subunit A [Acinetobacter calcoaceticus
RUH2202]
gi|262258509|gb|EEY77242.1| Holliday junction helicase subunit A [Acinetobacter calcoaceticus
RUH2202]
Length = 199
Score = 34.6 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
I L ++PG G ++A R + L LA+
Sbjct: 106 INTLIKVPGVGKKTAERLMIEL----RDRFKTLAQ 136
>gi|260892910|ref|YP_003239007.1| DNA polymerase I [Ammonifex degensii KC4]
gi|260865051|gb|ACX52157.1| DNA polymerase I [Ammonifex degensii KC4]
Length = 868
Score = 34.6 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 20 IPGFGPRSARRATLH-------LVKKKEQLLGPLAEAMANIYNK 56
+PG GP++A R L L++ KE L L E + +
Sbjct: 194 LPGIGPKTASRL-LQSHQSLEKLLESKESLPAKLRETLERHKEE 236
>gi|299769122|ref|YP_003731148.1| Holliday junction DNA helicase RuvA [Acinetobacter sp. DR1]
gi|298699210|gb|ADI89775.1| Holliday junction DNA helicase RuvA [Acinetobacter sp. DR1]
Length = 199
Score = 34.6 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
I L ++PG G ++A R + L LA+
Sbjct: 106 INTLIKVPGVGKKTAERLMIEL----RDRFKTLAQ 136
>gi|242310193|ref|ZP_04809348.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter
pullorum MIT 98-5489]
gi|239523490|gb|EEQ63356.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter
pullorum MIT 98-5489]
Length = 192
Score = 34.6 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRA 31
T + +++ + R+PG GP+SA R
Sbjct: 94 YTPQTFAKVVESNDIKSMQRVPGIGPKSAGRI 125
>gi|84489432|ref|YP_447664.1| hypothetical protein Msp_0623 [Methanosphaera stadtmanae DSM 3091]
gi|84372751|gb|ABC57021.1| RpoE2 [Methanosphaera stadtmanae DSM 3091]
Length = 61
Score = 34.6 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 58 CLCSICGNVDTTDPCAIC-IDQQRDASVIIVVEDV--ADLWALERSKAVNALY 107
C C V C +C + D + +IVV + +DL E + + Y
Sbjct: 4 RACPRCRCVTFDKVCPLCKTETSSDWTGLIVVLNPDESDLAK-ELNISFPGRY 55
>gi|325479490|gb|EGC82586.1| endonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 34.6 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 14 IKILARIPGFGPRSA 28
IK L ++PG G ++A
Sbjct: 94 IKELMKLPGVGRKTA 108
>gi|325981222|ref|YP_004293624.1| Holliday junction ATP-dependent DNA helicase ruvA [Nitrosomonas sp.
AL212]
gi|325530741|gb|ADZ25462.1| Holliday junction ATP-dependent DNA helicase ruvA [Nitrosomonas sp.
AL212]
Length = 193
Score = 34.6 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47
L ++PG G ++A R L L + + L L+
Sbjct: 110 LVKVPGIGKKTAERLLLEL--RDKLDLALLS 138
>gi|159904747|ref|YP_001548409.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
gi|159886240|gb|ABX01177.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
Length = 356
Score = 34.6 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28
+K K I N I+ L ++PG G ++A
Sbjct: 107 EKYDSK-IPNSIEELIKLPGVGRKTA 131
>gi|293609857|ref|ZP_06692159.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828309|gb|EFF86672.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123084|gb|ADY82607.1| holliday junction helicase subunit A [Acinetobacter calcoaceticus
PHEA-2]
Length = 199
Score = 34.6 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48
I L ++PG G ++A R + L LA+
Sbjct: 106 INTLVKVPGVGKKTAERLMIEL----RDRFKTLAQ 136
>gi|237740652|ref|ZP_04571133.1| DNA topoisomerase I [Fusobacterium sp. 2_1_31]
gi|229422669|gb|EEO37716.1| DNA topoisomerase I [Fusobacterium sp. 2_1_31]
Length = 756
Score = 34.6 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 19/101 (18%)
Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL------------DRIGPEDIGIQ 128
D + +++VE A +E+ + + Y V+ + D P + I+
Sbjct: 9 DKNKLVIVESPAKAKTIEK--ILGSSYKVISSYGHIIDLPKTKIGVDVKDNFKPSYLTIK 66
Query: 129 SLIERIEVKKIR-----ELIFAISATIEGQTTAHYIMDKLK 164
E I+ K E+ A EG++ A +I + LK
Sbjct: 67 GKGEVIKKLKEAAKKADEIYLASDPDREGESIAWHIANTLK 107
>gi|153952036|ref|YP_001398280.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
doylei 269.97]
gi|166230536|sp|A7H450|RUVA_CAMJD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|152939482|gb|ABS44223.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp.
doylei 269.97]
Length = 183
Score = 34.6 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 17 LARIPGFGPRSARRATLHLVKKK-------EQLLGPLAEAMA 51
L ++PG GP+SA+R + L + + LA +
Sbjct: 110 LKKVPGIGPKSAKRIIVELSDTRTKLENVSDDKSEALAALLT 151
>gi|315923964|ref|ZP_07920192.1| crossover junction ATP-dependent DNA helicase RuvA
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622804|gb|EFV02757.1| crossover junction ATP-dependent DNA helicase RuvA
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 231
Score = 34.6 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49
K +AR PG G ++A R L L + + ++ +A
Sbjct: 135 KAIARAPGIGKKTAERIILELKDRYKDVVAEEGDA 169
>gi|332029603|gb|EGI69492.1| WD repeat-containing protein 59 [Acromyrmex echinatior]
Length = 949
Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 32 TLH---LVKKKEQLLGPLAEAMANIYNKV---CLCSICGNVDTTDPCAIC 75
LH L+ + +L L+ + N+ V C ICG + CA C
Sbjct: 839 ALHRWELLDARAHVLKHLSASSNNVQKDVELQNECRICGKISPGPQCANC 888
>gi|289192268|ref|YP_003458209.1| PP-loop domain protein [Methanocaldococcus sp. FS406-22]
gi|288938718|gb|ADC69473.1| PP-loop domain protein [Methanocaldococcus sp. FS406-22]
Length = 311
Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 51 ANIYNKVCLCSICGNVDTTDPCAICI 76
N+ ++ C ICG + + C +C
Sbjct: 270 LNVKEEIRRCKICGFPCSGNLCKVCS 295
>gi|153855299|ref|ZP_01996465.1| hypothetical protein DORLON_02479 [Dorea longicatena DSM 13814]
gi|149752298|gb|EDM62229.1| hypothetical protein DORLON_02479 [Dorea longicatena DSM 13814]
Length = 204
Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58
PG G ++A + L L + L +A+ N N V
Sbjct: 114 PGIGKKTAEKLILEL-----KDKLKLEDALENAANAVQ 146
>gi|222823639|ref|YP_002575213.1| Holliday junction DNA helicase, DNA-binding subunit [Campylobacter
lari RM2100]
gi|254766949|sp|B9KFX7|RUVA_CAMLR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|222538861|gb|ACM63962.1| Holliday junction DNA helicase, DNA-binding subunit [Campylobacter
lari RM2100]
Length = 183
Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 17 LARIPGFGPRSARRA 31
++PG GP+SA+R
Sbjct: 110 FKKVPGIGPKSAKRI 124
>gi|55980234|ref|YP_143531.1| hypothetical protein TTHA0265 [Thermus thermophilus HB8]
gi|55771647|dbj|BAD70088.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 261
Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 28 ARRATLHLVKK-KEQLLGPLAEAMANIYNKVC--LCSICGNVDTTDPCAICIDQQRDASV 84
A R L L +K +L +A A ++ + C +C T PC C D V
Sbjct: 123 AGRKALALAEKAPPELRERVARAALALFQRQRGDPCPVCQTPSETHPCPTCRRHLEDPGV 182
>gi|261403320|ref|YP_003247544.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
gi|261370313|gb|ACX73062.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
Length = 305
Score = 34.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 44 GPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76
L + + + C ICG++ + + C +C
Sbjct: 265 ESLLKLIEYREGNLKKCKICGSLCSGELCKVCS 297
>gi|134098596|ref|YP_001104257.1| Holliday junction DNA helicase RuvA [Saccharopolyspora erythraea
NRRL 2338]
gi|291008207|ref|ZP_06566180.1| Holliday junction DNA helicase RuvA [Saccharopolyspora erythraea
NRRL 2338]
gi|166200258|sp|A4FBA7|RUVA_SACEN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|133911219|emb|CAM01332.1| Holliday junction DNA helicase [Saccharopolyspora erythraea NRRL
2338]
Length = 200
Score = 34.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
I L ++PG G +SA R L L
Sbjct: 106 ITTLTQVPGVGKKSAERLILEL 127
>gi|330815560|ref|YP_004359265.1| Holliday junction resolvasome, DNA-binding subunit [Burkholderia
gladioli BSR3]
gi|327367953|gb|AEA59309.1| Holliday junction resolvasome, DNA-binding subunit [Burkholderia
gladioli BSR3]
Length = 193
Score = 34.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30
++ +E+ ++ + L R+PG G ++A R
Sbjct: 93 MSVQELSQVVTLQDSARLTRLPGIGKKTAER 123
>gi|289192134|ref|YP_003458075.1| TOPRIM domain protein [Methanocaldococcus sp. FS406-22]
gi|288938584|gb|ADC69339.1| TOPRIM domain protein [Methanocaldococcus sp. FS406-22]
Length = 128
Score = 34.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145
I+VE D+ +LE+ + ++ P + L+ K+++E+I
Sbjct: 26 IIVEGKRDVESLEKLGV-EGTFIIIA--------KTPIYLIADELVR----KRVKEVILL 72
Query: 146 ISATIEGQTTAHYIMDKLKGIDVKI-TRLAY 175
G+ A I+++ + +K+ T++ +
Sbjct: 73 TDFDRRGRMLAKAIVEEFRHRGIKVNTKIRH 103
>gi|260893478|ref|YP_003239575.1| Holliday junction DNA helicase RuvA [Ammonifex degensii KC4]
gi|260865619|gb|ACX52725.1| Holliday junction DNA helicase RuvA [Ammonifex degensii KC4]
Length = 193
Score = 34.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGP 45
+ I +++E L +PG G ++ARR L++ KE+ P
Sbjct: 100 EAIRSEDLEKL----TVVPGVGKKTARRL---LLELKEEKGAP 135
>gi|46200022|ref|YP_005689.1| hypothetical protein TTC1720 [Thermus thermophilus HB27]
gi|46197649|gb|AAS82062.1| hypothetical conserved protein [Thermus thermophilus HB27]
Length = 261
Score = 34.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 28 ARRATLHLVKK-KEQLLGPLAEAMANIYNKVC--LCSICGNVDTTDPCAICIDQQRDASV 84
A R L L +K +L +A A ++ + C +C T PC C D V
Sbjct: 123 AGRKALALAEKAPPELRERVARAALALFQRQRGDPCPVCQTPSETHPCPTCRRHLEDPGV 182
>gi|319943009|ref|ZP_08017292.1| crossover junction ATP-dependent DNA helicase RuvA [Lautropia
mirabilis ATCC 51599]
gi|319743551|gb|EFV95955.1| crossover junction ATP-dependent DNA helicase RuvA [Lautropia
mirabilis ATCC 51599]
Length = 195
Score = 34.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 17 LARIPGFGPRSARRATLHL 35
L R+PG G ++A R L L
Sbjct: 110 LTRVPGVGKKTAERLLLEL 128
>gi|15827159|ref|NP_301422.1| Holliday junction DNA helicase RuvA [Mycobacterium leprae TN]
gi|221229637|ref|YP_002503053.1| Holliday junction DNA helicase RuvA [Mycobacterium leprae Br4923]
gi|730695|sp|P40832|RUVA_MYCLE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|254767378|sp|B8ZUI1|RUVA_MYCLB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA
gi|466820|gb|AAA17095.1| ruvA [Mycobacterium leprae]
gi|13092707|emb|CAC29990.1| Holliday junction DNA helicase component [Mycobacterium leprae]
gi|219932744|emb|CAR70575.1| Holliday junction DNA helicase component [Mycobacterium leprae
Br4923]
Length = 203
Score = 34.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 IKILARIPGFGPRSARRATLHL 35
+ L R+PG G R A R L L
Sbjct: 106 VASLTRVPGIGKRGAERIVLEL 127
>gi|304439856|ref|ZP_07399750.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371595|gb|EFM25207.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 210
Score = 34.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28
M G E+ N I+ L ++PG G ++A
Sbjct: 98 MIIDEYGGEVPNTIEELVKLPGVGKKTA 125
>gi|325686016|gb|EGD28075.1| DNA topoisomerase TopA [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 724
Score = 34.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 25/99 (25%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGSLSPLD------RIGPED------------- 124
+++VE A +E+ YHV+ D + E
Sbjct: 35 LVIVESPAKAHTIEK---YLGRKYHVIASKGHIRDLPKSQMGVDIEHDYQPKYISIRGKG 91
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
I+ L + E KK ++ A EG+ A ++ L
Sbjct: 92 DTIKEL--KAEAKKANKVYLASDPDREGEAIAWHVAHVL 128
>gi|313123913|ref|YP_004034172.1| DNA topoisomerase i [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280476|gb|ADQ61195.1| DNA topoisomerase I [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 724
Score = 34.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 25/99 (25%)
Query: 85 IIVVEDVADLWALERSKAVNAL-YHVLGGSLSPLD------RIGPED------------- 124
+++VE A +E+ YHV+ D + E
Sbjct: 35 LVIVESPAKAHTIEK---YLGRKYHVIASKGHIRDLPKSQMGVDIEHDYQPKYISIRGKG 91
Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163
I+ L + E KK ++ A EG+ A ++ L
Sbjct: 92 DTIKEL--KAEAKKANKVYLASDPDREGEAIAWHVAHVL 128
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.187 0.665
Lambda K H
0.267 0.0573 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,992,703,268
Number of Sequences: 14124377
Number of extensions: 261827670
Number of successful extensions: 648564
Number of sequences better than 10.0: 2985
Number of HSP's better than 10.0 without gapping: 4487
Number of HSP's successfully gapped in prelim test: 355
Number of HSP's that attempted gapping in prelim test: 641815
Number of HSP's gapped (non-prelim): 5001
length of query: 201
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 69
effective length of database: 2,978,375,866
effective search space: 205507934754
effective search space used: 205507934754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 79 (34.6 bits)