BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780762|ref|YP_003065175.1| recombination protein RecR [Candidatus Liberibacter asiaticus str. psy62] (201 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|289422930|ref|ZP_06424753.1| recombination protein RecR [Peptostreptococcus anaerobius 653-L] gi|289156653|gb|EFD05295.1| recombination protein RecR [Peptostreptococcus anaerobius 653-L] Length = 199 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 129/201 (64%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + I+ LI +++PG G ++A+R H++ E + LA+A+ ++ ++ C Sbjct: 1 MEN--YSEPIDRLINEFSKLPGVGRKTAQRLAFHVINMNENDVKGLAKALVDVKQEIKYC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N+ +D C IC + RDAS I VVED D+ A+ER+K N YHVL G +SPLD + Sbjct: 59 SVCCNISDSDVCPICSNSHRDASTICVVEDPRDVAAMERTKDYNGKYHVLNGVISPLDGV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I+ LI R+ +++ELI A + TIEG+ TA YI +K + VK+TR+A+G+P+G Sbjct: 119 GPEMLNIKELISRLGDGQVKELIMATNPTIEGEATAMYISRLVKPMGVKVTRIAHGLPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y DD TI +A+ R + Sbjct: 179 GDLEYADDVTISKALEGRREI 199 >gi|153007368|ref|YP_001368583.1| recombination protein RecR [Ochrobactrum anthropi ATCC 49188] gi|166221949|sp|A6WUV0|RECR_OCHA4 RecName: Full=Recombination protein recR gi|151559256|gb|ABS12754.1| recombination protein RecR [Ochrobactrum anthropi ATCC 49188] Length = 201 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 160/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDERRDPTTLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ +I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVSTGEIKEVILAVNATVEGQTTAHYITDQLSSFDVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|189023296|ref|YP_001934064.1| recombination protein RecR [Brucella abortus S19] gi|225626581|ref|ZP_03784620.1| recombination protein RecR [Brucella ceti str. Cudo] gi|237814507|ref|ZP_04593505.1| recombination protein RecR [Brucella abortus str. 2308 A] gi|297247439|ref|ZP_06931157.1| recombination protein RecR [Brucella abortus bv. 5 str. B3196] gi|189018868|gb|ACD71590.1| recombination protein RecR [Brucella abortus S19] gi|225618238|gb|EEH15281.1| recombination protein RecR [Brucella ceti str. Cudo] gi|237789344|gb|EEP63554.1| recombination protein RecR [Brucella abortus str. 2308 A] gi|297174608|gb|EFH33955.1| recombination protein RecR [Brucella abortus bv. 5 str. B3196] Length = 232 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 92 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 152 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 211 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 212 GELDYLDEGTLAAALRARTTL 232 >gi|254718253|ref|ZP_05180064.1| recombination protein RecR [Brucella sp. 83/13] gi|265983213|ref|ZP_06095948.1| recombination protein recR [Brucella sp. 83/13] gi|306839995|ref|ZP_07472789.1| recombination protein RecR [Brucella sp. NF 2653] gi|306842675|ref|ZP_07475319.1| recombination protein RecR [Brucella sp. BO2] gi|264661805|gb|EEZ32066.1| recombination protein recR [Brucella sp. 83/13] gi|306287184|gb|EFM58683.1| recombination protein RecR [Brucella sp. BO2] gi|306404959|gb|EFM61244.1| recombination protein RecR [Brucella sp. NF 2653] Length = 201 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 126/201 (62%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC DQ+RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDQRRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVAGGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|325291537|ref|YP_004277401.1| recombination protein RecR [Agrobacterium sp. H13-3] gi|325059390|gb|ADY63081.1| recombination protein RecR [Agrobacterium sp. H13-3] Length = 201 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 130/201 (64%), Positives = 163/201 (81%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKKEQLLGPL AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D +RD SVIIVVEDV+DLWALER+ A+N YHVLGG+LSPLD + Sbjct: 61 SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I+ LI+R+ IRELI A++AT+EGQ TAHYI D L + +KITRLA+G+P+G Sbjct: 121 GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDHLADLGIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT + Sbjct: 181 GELDYLDEGTLTAALRARTTI 201 >gi|148560476|ref|YP_001258079.1| recombination protein RecR [Brucella ovis ATCC 25840] gi|148371733|gb|ABQ61712.1| recombination protein RecR [Brucella ovis ATCC 25840] Length = 232 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 124/201 (61%), Positives = 158/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++R + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 92 SCCGNVDTSDPCTICTDERRAPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 152 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 211 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 212 GELDYLDEGTLAAALRARTTL 232 >gi|306843632|ref|ZP_07476233.1| recombination protein RecR [Brucella sp. BO1] gi|306276323|gb|EFM58023.1| recombination protein RecR [Brucella sp. BO1] Length = 201 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVAGGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|209551645|ref|YP_002283562.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226726306|sp|B5ZW36|RECR_RHILW RecName: Full=Recombination protein recR gi|209537401|gb|ACI57336.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 201 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 135/201 (67%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD S+IIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSIIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLNVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|23500947|ref|NP_697074.1| recombination protein RecR [Brucella suis 1330] gi|62289020|ref|YP_220813.1| recombination protein RecR [Brucella abortus bv. 1 str. 9-941] gi|82698958|ref|YP_413532.1| recombination protein RecR [Brucella melitensis biovar Abortus 2308] gi|161618022|ref|YP_001591909.1| recombination protein RecR [Brucella canis ATCC 23365] gi|163842308|ref|YP_001626712.1| recombination protein RecR [Brucella suis ATCC 23445] gi|254690346|ref|ZP_05153600.1| recombination protein RecR [Brucella abortus bv. 6 str. 870] gi|254694835|ref|ZP_05156663.1| recombination protein RecR [Brucella abortus bv. 3 str. Tulya] gi|254696464|ref|ZP_05158292.1| recombination protein RecR [Brucella abortus bv. 2 str. 86/8/59] gi|254700847|ref|ZP_05162675.1| recombination protein RecR [Brucella suis bv. 5 str. 513] gi|254705214|ref|ZP_05167042.1| recombination protein RecR [Brucella suis bv. 3 str. 686] gi|254707266|ref|ZP_05169094.1| recombination protein RecR [Brucella pinnipedialis M163/99/10] gi|254709192|ref|ZP_05171003.1| recombination protein RecR [Brucella pinnipedialis B2/94] gi|254713383|ref|ZP_05175194.1| recombination protein RecR [Brucella ceti M644/93/1] gi|254716259|ref|ZP_05178070.1| recombination protein RecR [Brucella ceti M13/05/1] gi|254731376|ref|ZP_05189954.1| recombination protein RecR [Brucella abortus bv. 4 str. 292] gi|256030716|ref|ZP_05444330.1| recombination protein RecR [Brucella pinnipedialis M292/94/1] gi|256060175|ref|ZP_05450355.1| recombination protein RecR [Brucella neotomae 5K33] gi|256158722|ref|ZP_05456597.1| recombination protein RecR [Brucella ceti M490/95/1] gi|256254120|ref|ZP_05459656.1| recombination protein RecR [Brucella ceti B1/94] gi|256258600|ref|ZP_05464136.1| recombination protein RecR [Brucella abortus bv. 9 str. C68] gi|256368499|ref|YP_003106005.1| recombination protein RecR [Brucella microti CCM 4915] gi|260169619|ref|ZP_05756430.1| recombination protein RecR [Brucella sp. F5/99] gi|260546314|ref|ZP_05822054.1| recombination protein recR [Brucella abortus NCTC 8038] gi|260567319|ref|ZP_05837789.1| recombination protein recR [Brucella suis bv. 4 str. 40] gi|260755888|ref|ZP_05868236.1| recombination protein recR [Brucella abortus bv. 6 str. 870] gi|260759112|ref|ZP_05871460.1| recombination protein recR [Brucella abortus bv. 4 str. 292] gi|260760837|ref|ZP_05873180.1| recombination protein recR [Brucella abortus bv. 2 str. 86/8/59] gi|260884912|ref|ZP_05896526.1| recombination protein recR [Brucella abortus bv. 9 str. C68] gi|261215163|ref|ZP_05929444.1| recombination protein recR [Brucella abortus bv. 3 str. Tulya] gi|261218035|ref|ZP_05932316.1| recombination protein recR [Brucella ceti M13/05/1] gi|261221262|ref|ZP_05935543.1| recombination protein recR [Brucella ceti B1/94] gi|261314749|ref|ZP_05953946.1| recombination protein recR [Brucella pinnipedialis M163/99/10] gi|261316692|ref|ZP_05955889.1| recombination protein recR [Brucella pinnipedialis B2/94] gi|261321115|ref|ZP_05960312.1| recombination protein recR [Brucella ceti M644/93/1] gi|261324152|ref|ZP_05963349.1| recombination protein recR [Brucella neotomae 5K33] gi|261751357|ref|ZP_05995066.1| recombination protein recR [Brucella suis bv. 5 str. 513] gi|261755922|ref|ZP_05999631.1| recombination protein recR [Brucella suis bv. 3 str. 686] gi|261759148|ref|ZP_06002857.1| recombination protein recR [Brucella sp. F5/99] gi|265987762|ref|ZP_06100319.1| recombination protein recR [Brucella pinnipedialis M292/94/1] gi|265997223|ref|ZP_06109780.1| recombination protein recR [Brucella ceti M490/95/1] gi|294851441|ref|ZP_06792114.1| recombination protein RecR [Brucella sp. NVSL 07-0026] gi|38258603|sp|Q8G3B7|RECR_BRUSU RecName: Full=Recombination protein recR gi|73621473|sp|Q57FY2|RECR_BRUAB RecName: Full=Recombination protein recR gi|123546965|sp|Q2YPN0|RECR_BRUA2 RecName: Full=Recombination protein recR gi|189029354|sp|A9M6N7|RECR_BRUC2 RecName: Full=Recombination protein recR gi|189029355|sp|B0CI52|RECR_BRUSI RecName: Full=Recombination protein recR gi|23346803|gb|AAN28989.1| recombination protein RecR [Brucella suis 1330] gi|62195152|gb|AAX73452.1| RecR, recombination protein [Brucella abortus bv. 1 str. 9-941] gi|82615059|emb|CAJ09985.1| RecR protein:Toprim sub-domain:TOPRIM [Brucella melitensis biovar Abortus 2308] gi|161334833|gb|ABX61138.1| recombination protein RecR [Brucella canis ATCC 23365] gi|163673031|gb|ABY37142.1| recombination protein RecR [Brucella suis ATCC 23445] gi|255998657|gb|ACU47056.1| recombination protein RecR [Brucella microti CCM 4915] gi|260096421|gb|EEW80297.1| recombination protein recR [Brucella abortus NCTC 8038] gi|260156837|gb|EEW91917.1| recombination protein recR [Brucella suis bv. 4 str. 40] gi|260669430|gb|EEX56370.1| recombination protein recR [Brucella abortus bv. 4 str. 292] gi|260671269|gb|EEX58090.1| recombination protein recR [Brucella abortus bv. 2 str. 86/8/59] gi|260675996|gb|EEX62817.1| recombination protein recR [Brucella abortus bv. 6 str. 870] gi|260874440|gb|EEX81509.1| recombination protein recR [Brucella abortus bv. 9 str. C68] gi|260916770|gb|EEX83631.1| recombination protein recR [Brucella abortus bv. 3 str. Tulya] gi|260919846|gb|EEX86499.1| recombination protein recR [Brucella ceti B1/94] gi|260923124|gb|EEX89692.1| recombination protein recR [Brucella ceti M13/05/1] gi|261293805|gb|EEX97301.1| recombination protein recR [Brucella ceti M644/93/1] gi|261295915|gb|EEX99411.1| recombination protein recR [Brucella pinnipedialis B2/94] gi|261300132|gb|EEY03629.1| recombination protein recR [Brucella neotomae 5K33] gi|261303775|gb|EEY07272.1| recombination protein recR [Brucella pinnipedialis M163/99/10] gi|261739132|gb|EEY27128.1| recombination protein recR [Brucella sp. F5/99] gi|261741110|gb|EEY29036.1| recombination protein recR [Brucella suis bv. 5 str. 513] gi|261745675|gb|EEY33601.1| recombination protein recR [Brucella suis bv. 3 str. 686] gi|262551691|gb|EEZ07681.1| recombination protein recR [Brucella ceti M490/95/1] gi|264659959|gb|EEZ30220.1| recombination protein recR [Brucella pinnipedialis M292/94/1] gi|294820030|gb|EFG37029.1| recombination protein RecR [Brucella sp. NVSL 07-0026] Length = 201 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|15887447|ref|NP_353128.1| recombination protein RecR [Agrobacterium tumefaciens str. C58] gi|21759386|sp|Q8UJ45|RECR_AGRT5 RecName: Full=Recombination protein recR gi|15154962|gb|AAK85913.1| Recombination protein [Agrobacterium tumefaciens str. C58] Length = 201 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 131/201 (65%), Positives = 165/201 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKKEQLLGPL AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D +RD SVIIVVEDV+DLWALER+ A+N YHVLGG+LSPLD + Sbjct: 61 SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I+ LI+R+ IRELI A++AT+EGQ TAHYI D+L G+ +KITRLA+G+P+G Sbjct: 121 GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDRLSGLGIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT + Sbjct: 181 GELDYLDEGTLTAALRARTTI 201 >gi|172048304|sp|A5VMY2|RECR_BRUO2 RecName: Full=Recombination protein recR Length = 201 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 124/201 (61%), Positives = 158/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++R + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDERRAPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|297543596|ref|YP_003675898.1| recombination protein RecR [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841371|gb|ADH59887.1| recombination protein RecR [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 199 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + LI+ L+++PG GP++A+R ++ + + L++++ + K+ C I Sbjct: 1 MGYYSASLAKLIEELSKLPGIGPKTAQRLAFFIINMPTEEVKSLSQSIIDAKEKIKYCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ IGP Sbjct: 61 CYNITDTEVCNICSDEERDNSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L++R++ ++E+I A + IEG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGVKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R L Sbjct: 181 LEYTDVVTLSRALEGRREL 199 >gi|13474593|ref|NP_106162.1| recombination protein RecR [Mesorhizobium loti MAFF303099] gi|20139628|sp|Q98BM4|RECR_RHILO RecName: Full=Recombination protein recR gi|14025347|dbj|BAB51948.1| recombination protein; RecR [Mesorhizobium loti MAFF303099] Length = 201 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 128/199 (64%), Positives = 164/199 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AM+ +KV +C Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMSEAADKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC IC D +RDA IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD I Sbjct: 61 STCGNVDTADPCMICTDPRRDAGTIIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + I+SLI+R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G Sbjct: 121 GPDQLNIRSLIDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+RSRT Sbjct: 181 GELDYLDEGTLAAALRSRT 199 >gi|190889792|ref|YP_001976334.1| DNA recombination protein [Rhizobium etli CIAT 652] gi|229470340|sp|B3PXF0|RECR_RHIE6 RecName: Full=Recombination protein recR gi|190695071|gb|ACE89156.1| DNA recombination protein [Rhizobium etli CIAT 652] gi|327190228|gb|EGE57331.1| DNA recombination protein [Rhizobium etli CNPAF512] Length = 201 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 137/201 (68%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|164686924|ref|ZP_02210952.1| hypothetical protein CLOBAR_00524 [Clostridium bartlettii DSM 16795] gi|164604027|gb|EDQ97492.1| hypothetical protein CLOBAR_00524 [Clostridium bartlettii DSM 16795] Length = 199 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 127/199 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSI Sbjct: 1 MQYYTEPISRLIEEFSKLPGIGKKTAQRLAFHVINMNNNDVEALSKAILDAKKEIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC++C + RD+SVI VVED D+ A+E+ + YHVL G +SP+D IGP Sbjct: 61 CCNITDKDPCSMCSNPNRDSSVICVVEDPRDVAAMEKIREFKGQYHVLNGVISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I I+ LI+R+ + ++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G + Sbjct: 121 DMINIKELIQRLGNQDVKEIIMATNPTIEGEATAMYIARLIKPMGIKVTRIAHGLPIGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ TI +A+ R + Sbjct: 181 LEYADEVTISKALEGRREI 199 >gi|17988193|ref|NP_540827.1| recombination protein RecR [Brucella melitensis bv. 1 str. 16M] gi|17983955|gb|AAL53091.1| recombination protein recr [Brucella melitensis bv. 1 str. 16M] Length = 224 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 24 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 83 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 84 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 143 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 144 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 203 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 204 GELDYLDEGTLAAALRARTTL 224 >gi|308066976|ref|YP_003868581.1| Recombination protein recR [Paenibacillus polymyxa E681] gi|305856255|gb|ADM68043.1| Recombination protein recR [Paenibacillus polymyxa E681] Length = 199 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 84/197 (42%), Positives = 130/197 (65%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI R+PG GP++A R H++K KE + A+A+ N+ + CS+CG Sbjct: 2 YYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TDPC IC D+ RD SVI VV+D DL A+ER+K N YHVL G++SP++ IGPED Sbjct: 62 NITDTDPCRICQDKTRDTSVICVVQDSKDLVAMERTKEFNGFYHVLHGAISPMEGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++ L+ R+ ++++ELI A + IEG+ TA YI ++ ++K+TR+A+G+P+G +L+ Sbjct: 122 IKLKELLNRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKALEGRREL 198 >gi|86355783|ref|YP_467675.1| recombination protein RecR [Rhizobium etli CFN 42] gi|123513433|sp|Q2KDY8|RECR_RHIEC RecName: Full=Recombination protein recR gi|86279885|gb|ABC88948.1| DNA recombination protein [Rhizobium etli CFN 42] Length = 201 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 136/201 (67%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+R+ IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|239830867|ref|ZP_04679196.1| recombination protein RecR [Ochrobactrum intermedium LMG 3301] gi|239823134|gb|EEQ94702.1| recombination protein RecR [Ochrobactrum intermedium LMG 3301] Length = 232 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 126/201 (62%), Positives = 160/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 32 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 91 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 92 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERAGTMNVRYHVLGGRLSPLDGI 151 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ +IRE+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 152 GPDDLNIKGLVERVAAGEIREVILAVNATVEGQTTAHYITDQLSSFDVRVTRLAHGVPVG 211 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 212 GELDYLDEGTLAAALRARTTL 232 >gi|218514436|ref|ZP_03511276.1| recombination protein RecR [Rhizobium etli 8C-3] Length = 201 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 138/201 (68%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+RI IRELI A++ATIEGQTTAHYI D+L+G+DVKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATIEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|260462015|ref|ZP_05810260.1| recombination protein RecR [Mesorhizobium opportunistum WSM2075] gi|259032262|gb|EEW33528.1| recombination protein RecR [Mesorhizobium opportunistum WSM2075] Length = 201 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 126/199 (63%), Positives = 165/199 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AM +KV +C Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMGEAADKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D +RDA+ +IVVEDV+DLWALER+ A+N YHVLGG+LSPLD + Sbjct: 61 STCGNVDTSDPCMICTDPRRDATTLIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + I+SLI+R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G Sbjct: 121 GPDQLNIRSLIDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+RSRT Sbjct: 181 GELDYLDEGTLAAALRSRT 199 >gi|210623908|ref|ZP_03294117.1| hypothetical protein CLOHIR_02068 [Clostridium hiranonis DSM 13275] gi|210153272|gb|EEA84278.1| hypothetical protein CLOHIR_02068 [Clostridium hiranonis DSM 13275] Length = 200 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 131/200 (65%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + I LI+ +++PG G ++A+R H+V + LA+A+ + ++ CS Sbjct: 1 MMQVYTEPITRLIEEFSKLPGVGRKTAQRLAFHVVNMNNNDVEALAKAIVDAKREIRYCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 IC N+ TDPC++C ++ RD SVI VVED D+ A+ER+K N LYHVL G +SP+D +G Sbjct: 61 ICCNITDTDPCSMCSNKNRDKSVICVVEDPRDVAAMERTKDYNGLYHVLHGVISPMDGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+ I I+ L+ R+ + ++E+I A + T+EG+ TA YI +K + +K+TR+A+G+P+G Sbjct: 121 PDMIKIKELLVRLSNQDVKEIIMATNPTVEGEATAMYIARLVKPMGIKVTRIAHGLPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ TI +A+ R + Sbjct: 181 DLEYADEVTISKALEGRREI 200 >gi|125974629|ref|YP_001038539.1| recombination protein RecR [Clostridium thermocellum ATCC 27405] gi|281419177|ref|ZP_06250194.1| recombination protein RecR [Clostridium thermocellum JW20] gi|171769989|sp|A3DHB7|RECR_CLOTH RecName: Full=Recombination protein recR gi|125714854|gb|ABN53346.1| recombination protein RecR [Clostridium thermocellum ATCC 27405] gi|281407326|gb|EFB37587.1| recombination protein RecR [Clostridium thermocellum JW20] gi|316941747|gb|ADU75781.1| recombination protein RecR [Clostridium thermocellum DSM 1313] Length = 199 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 124/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ ++PG G ++A+R +++ ++ + LA A+ K CS+ Sbjct: 1 MSFYAAPIARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ TD C +C ++RD+SVI VVED D+ A+E+ + LYHVL G++SP+ IGP Sbjct: 61 CGNLTDTDVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L++RI+ ++E+I A + IEG+ TA YI +K + VK TR+A+GIP+G + Sbjct: 121 EDIKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLAKALEGRREI 199 >gi|218679359|ref|ZP_03527256.1| recombination protein RecR [Rhizobium etli CIAT 894] Length = 201 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 136/201 (67%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDTQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLEVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|256045823|ref|ZP_05448699.1| recombination protein RecR [Brucella melitensis bv. 1 str. Rev.1] gi|256112540|ref|ZP_05453461.1| recombination protein RecR [Brucella melitensis bv. 3 str. Ether] gi|260563114|ref|ZP_05833600.1| recombination protein recR [Brucella melitensis bv. 1 str. 16M] gi|265992236|ref|ZP_06104793.1| recombination protein recR [Brucella melitensis bv. 1 str. Rev.1] gi|265993979|ref|ZP_06106536.1| recombination protein recR [Brucella melitensis bv. 3 str. Ether] gi|20139475|sp|Q8YEG8|RECR_BRUME RecName: Full=Recombination protein recR gi|260153130|gb|EEW88222.1| recombination protein recR [Brucella melitensis bv. 1 str. 16M] gi|262764960|gb|EEZ10881.1| recombination protein recR [Brucella melitensis bv. 3 str. Ether] gi|263003302|gb|EEZ15595.1| recombination protein recR [Brucella melitensis bv. 1 str. Rev.1] Length = 201 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L DV++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|167038709|ref|YP_001661694.1| recombination protein RecR [Thermoanaerobacter sp. X514] gi|256751421|ref|ZP_05492299.1| recombination protein RecR [Thermoanaerobacter ethanolicus CCSD1] gi|300913732|ref|ZP_07131049.1| recombination protein RecR [Thermoanaerobacter sp. X561] gi|307723252|ref|YP_003903003.1| recombination protein RecR [Thermoanaerobacter sp. X513] gi|229470345|sp|B0K101|RECR_THEPX RecName: Full=Recombination protein recR gi|166852949|gb|ABY91358.1| recombination protein RecR [Thermoanaerobacter sp. X514] gi|256749640|gb|EEU62666.1| recombination protein RecR [Thermoanaerobacter ethanolicus CCSD1] gi|300890417|gb|EFK85562.1| recombination protein RecR [Thermoanaerobacter sp. X561] gi|307580313|gb|ADN53712.1| recombination protein RecR [Thermoanaerobacter sp. X513] Length = 199 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ L+++PG GP++A+R ++ + + L++A+ + K+ C I Sbjct: 1 MNYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GP Sbjct: 61 CYNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L++R++ ++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G + Sbjct: 121 EDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R L Sbjct: 181 LEYTDVVTLSRALEGRREL 199 >gi|167038578|ref|YP_001666156.1| recombination protein RecR [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116973|ref|YP_004187132.1| recombination protein RecR [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326390314|ref|ZP_08211873.1| recombination protein RecR [Thermoanaerobacter ethanolicus JW 200] gi|229470344|sp|B0K800|RECR_THEP3 RecName: Full=Recombination protein recR gi|166857412|gb|ABY95820.1| recombination protein RecR [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319930064|gb|ADV80749.1| recombination protein RecR [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325993591|gb|EGD52024.1| recombination protein RecR [Thermoanaerobacter ethanolicus JW 200] Length = 199 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ L+++PG GP++A+R ++ + + L++A+ + K+ C I Sbjct: 1 MNYYSTSIAKLIEELSKLPGIGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GP Sbjct: 61 CYNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L++R++ ++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G + Sbjct: 121 EDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R L Sbjct: 181 LEYTDVVTLSRALEGRREL 199 >gi|241207075|ref|YP_002978171.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860965|gb|ACS58632.1| recombination protein RecR [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 201 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 134/201 (66%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD + Sbjct: 61 SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+R+ +RELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRVGEGGMRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|116249898|ref|YP_765736.1| recombination protein RecR [Rhizobium leguminosarum bv. viciae 3841] gi|123082100|sp|Q1MN32|RECR_RHIL3 RecName: Full=Recombination protein recR gi|115254546|emb|CAK05620.1| putative recombination protein [Rhizobium leguminosarum bv. viciae 3841] Length = 201 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 135/201 (67%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD + Sbjct: 61 SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+R+ IRELI A++AT+EGQTTAHYI D+L+G+DVKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|15963986|ref|NP_384339.1| recombination protein RecR [Sinorhizobium meliloti 1021] gi|307306398|ref|ZP_07586142.1| recombination protein RecR [Sinorhizobium meliloti BL225C] gi|307319285|ref|ZP_07598714.1| recombination protein RecR [Sinorhizobium meliloti AK83] gi|20139570|sp|Q92SW9|RECR_RHIME RecName: Full=Recombination protein recR gi|15073162|emb|CAC41670.1| Probable recombination protein [Sinorhizobium meliloti 1021] gi|306895121|gb|EFN25878.1| recombination protein RecR [Sinorhizobium meliloti AK83] gi|306902240|gb|EFN32837.1| recombination protein RecR [Sinorhizobium meliloti BL225C] Length = 201 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 136/201 (67%), Positives = 172/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D++RD +VIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SCCGNVDTIDPCTVCTDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I+ LI+R+ +RELI A++AT+EGQTTAHYI D+L+G++V+ITRLA+G+P+G Sbjct: 121 GPEDLNIRGLIDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RTV+ Sbjct: 181 GELDYLDEGTLAAALRARTVI 201 >gi|222147139|ref|YP_002548096.1| recombination protein RecR [Agrobacterium vitis S4] gi|254790746|sp|B9JYJ6|RECR_AGRVS RecName: Full=Recombination protein recR gi|221734129|gb|ACM35092.1| DNA recombination protein [Agrobacterium vitis S4] Length = 201 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 126/201 (62%), Positives = 166/201 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KK+EQL+GPLA AM + KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKREQLMGPLALAMGEAHAKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D++RD S+IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD + Sbjct: 61 SCCGNVDTIDPCTVCTDERRDQSMIIVVEDVSDLWALERAGAMNVAYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+R+ +RE+I A++AT+EGQTTAHYI D L G+ VK TRLA+G+P+G Sbjct: 121 GPDDLNIKGLIDRVAKGGVREIIIAVNATVEGQTTAHYITDHLAGLGVKTTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT++ Sbjct: 181 GELDYLDEGTLSAALRARTLI 201 >gi|289577300|ref|YP_003475927.1| recombination protein RecR [Thermoanaerobacter italicus Ab9] gi|289527013|gb|ADD01365.1| recombination protein RecR [Thermoanaerobacter italicus Ab9] Length = 199 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + LI+ L+++PG GP++A+R ++ + + L++++ + K+ C I Sbjct: 1 MSYYSASLAKLIEELSKLPGIGPKTAQRLAFFIINMPIEEVKSLSQSIIDAKEKIKYCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ IGP Sbjct: 61 CYNITDTEVCNICNDEERDNSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L++R++ ++E+I A + IEG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKSLGVKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R L Sbjct: 181 LEYTDVVTLSRALEGRREL 199 >gi|304315583|ref|YP_003850728.1| recombination protein RecR [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777085|gb|ADL67644.1| recombination protein RecR [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 199 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 120/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI L+R+PG G ++A+R +++ + + L+ A+ N + C+ Sbjct: 1 MNVYSRSLSRLIDELSRLPGIGRKTAQRLAFYILDMPKDDVINLSNAILEAKNNLKYCNK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N +D C IC D+ RD+S I VV D D+ A+E+++ LYHVL G +SP+D IGP Sbjct: 61 CYNFTDSDLCNICSDETRDSSTICVVSDPKDVVAMEKTREYRGLYHVLHGVISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L+ERI I+E+I A + IEG+ TA YI +K +K+TR+A+G+P+G + Sbjct: 121 EDIKIKELLERINNNDIKEIILATNPDIEGEATAMYIAKLIKPFGIKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYTDSVTLSRALEGRREM 199 >gi|307243767|ref|ZP_07525904.1| recombination protein RecR [Peptostreptococcus stomatis DSM 17678] gi|306492866|gb|EFM64882.1| recombination protein RecR [Peptostreptococcus stomatis DSM 17678] Length = 199 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 128/201 (63%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + I+ LI +++PG G ++A+R H++ + + L++A+ ++ N++ C Sbjct: 1 MEN--YSEPIDRLINEFSKLPGIGRKTAQRLAFHVINMDIKDVTGLSKALVDVKNEIKYC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N+ T+ C IC + RD S I VVED D+ A+ER+K + YHVL G +SP+D I Sbjct: 59 SVCCNISDTEVCPICANSHRDPSTICVVEDPRDVAAMERTKDYSGRYHVLNGVISPMDGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + I+ LI R+ ++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G Sbjct: 119 GPDMLNIKELISRLGDGSVKEIIMATNPTIEGEATAMYISRLVKPMGIKVTRIAHGLPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y DD TI +A+ R + Sbjct: 179 GDLEYADDVTISKALEGRREI 199 >gi|299820911|ref|ZP_07052800.1| recombination protein R [Listeria grayi DSM 20601] gi|299817932|gb|EFI85167.1| recombination protein R [Listeria grayi DSM 20601] Length = 204 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 125/201 (62%), Gaps = 1/201 (0%) Query: 2 QKKI-TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 K+ + I L+ ++PG GP+SA R +++ KE + A+A+ + + C Sbjct: 4 SNKMHYPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLGFAKALVDAKRNLSFC 63 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CG++ DPC IC D RD V+ VVE+ D+ A+E+ + + LYHVL G++SP+D I Sbjct: 64 SVCGHITEQDPCYICADTTRDQHVVCVVEEPRDVIAMEKMRDYHGLYHVLHGTISPMDGI 123 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDI I LI+R++ I+E+I A + +EG+ TA YI +K +K+TR+A+G+P+G Sbjct: 124 GPEDINIPDLIKRLQDDTIQEVILATNPNVEGEATAMYISRLIKPSGIKVTRIAHGLPVG 183 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ +A+ R L Sbjct: 184 GDLEYADEVTLSKALEGRREL 204 >gi|332980767|ref|YP_004462208.1| DNA replication and repair protein RecR [Mahella australiensis 50-1 BON] gi|332698445|gb|AEE95386.1| DNA replication and repair protein RecR [Mahella australiensis 50-1 BON] Length = 199 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 127/199 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI L+++PG GP++A+R +++ + + LA+++ + +K+ CSI Sbjct: 1 MNYYAEPISRLINELSKLPGIGPKTAQRLAFYMLHMPKDAVHTLAQSINDARDKIIYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ DPCAIC RD S I VVE D+ A+E+++ N LYHVL G++SP+D +GP Sbjct: 61 CGNLTDVDPCAICSSSTRDNSTICVVESPTDVVAMEKTRGYNGLYHVLHGAISPIDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R+ +++E+I A + ++EG+ TA YI LK + K+TR+A GIP+G + Sbjct: 121 DDIRIKELLTRLRDSQVKEVILATNPSVEGEATALYISRMLKPMGFKVTRIANGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ TI A+ R + Sbjct: 181 LEYADEVTITRALEGRREM 199 >gi|255304955|ref|ZP_05349129.1| recombination protein [Clostridium difficile ATCC 43255] Length = 199 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 131/199 (65%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSI Sbjct: 1 MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKKEIRYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ TDPC++C ++ RD+SVI VVED D+ A+ER++ YHVL G +SP+D IGP Sbjct: 61 CCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + I+ LI+R+ ++++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G + Sbjct: 121 DMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ TI +A+ R + Sbjct: 181 LEYADEVTISKALEGRREI 199 >gi|126697584|ref|YP_001086481.1| recombination protein [Clostridium difficile 630] gi|254973668|ref|ZP_05270140.1| recombination protein [Clostridium difficile QCD-66c26] gi|255091059|ref|ZP_05320537.1| recombination protein [Clostridium difficile CIP 107932] gi|255099175|ref|ZP_05328152.1| recombination protein [Clostridium difficile QCD-63q42] gi|255312713|ref|ZP_05354296.1| recombination protein [Clostridium difficile QCD-76w55] gi|255515473|ref|ZP_05383149.1| recombination protein [Clostridium difficile QCD-97b34] gi|255648565|ref|ZP_05395467.1| recombination protein [Clostridium difficile QCD-37x79] gi|255654100|ref|ZP_05399509.1| recombination protein [Clostridium difficile QCD-23m63] gi|260681787|ref|YP_003213072.1| recombination protein [Clostridium difficile CD196] gi|260685384|ref|YP_003216517.1| recombination protein [Clostridium difficile R20291] gi|296452475|ref|ZP_06894174.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP08] gi|296878243|ref|ZP_06902253.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP07] gi|306518694|ref|ZP_07405041.1| recombination protein RecR [Clostridium difficile QCD-32g58] gi|123067140|sp|Q18CA2|RECR_CLOD6 RecName: Full=Recombination protein recR gi|115249021|emb|CAJ66832.1| DNA repair and recombination protein [Clostridium difficile] gi|260207950|emb|CBA60073.1| recombination protein [Clostridium difficile CD196] gi|260211400|emb|CBE01475.1| recombination protein [Clostridium difficile R20291] gi|296258681|gb|EFH05577.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP08] gi|296430751|gb|EFH16588.1| exodeoxyribonuclease V alpha subunit [Clostridium difficile NAP07] Length = 199 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 131/199 (65%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ I LI+ +++PG G ++A+R H++ + L++A+ + ++ CSI Sbjct: 1 MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ TDPC++C ++ RD+SVI VVED D+ A+ER++ YHVL G +SP+D IGP Sbjct: 61 CCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + I+ LI+R+ ++++E+I A + TIEG+ TA YI +K + +K+TR+A+G+P+G + Sbjct: 121 DMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ TI +A+ R + Sbjct: 181 LEYADEVTISKALEGRREI 199 >gi|288554628|ref|YP_003426563.1| recombination protein RecR [Bacillus pseudofirmus OF4] gi|288545788|gb|ADC49671.1| recombination protein RecR [Bacillus pseudofirmus OF4] Length = 198 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG GP++A R ++ KE + A+A+ N + CS+C N Sbjct: 3 YPEPIAKLIEGFMKLPGIGPKTASRLAFFVLDMKEDDVLDFAKALVNAKRNLTYCSVCHN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D+ RD S++ VV++ D+ A+E+ K YHVL G++SP+D IGPED+ Sbjct: 63 ITDTDPCRICEDKHRDDSMVCVVQEAKDVIAMEKMKEYRGHYHVLHGAISPMDGIGPEDV 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I+E+I A + TIEG+ TA YI +K +K+TR+A+G+P+G +L+Y Sbjct: 123 KIPELLKRLQDDTIQEVIIATNPTIEGEATAMYISRLVKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI R L Sbjct: 183 ADEVTLSRAIEGRREL 198 >gi|20806579|ref|NP_621750.1| recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] gi|24212232|sp|Q8RDI4|RECR_THETN RecName: Full=Recombination protein recR gi|20515021|gb|AAM23354.1| Recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] Length = 199 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 116/198 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + LI+ L+++PG GP++A+R ++ + L++A+ K+ C I Sbjct: 1 MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC D+ RD S I VV D+ A+E+ K +YHVL G +SP++ +GP Sbjct: 61 CFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L+ER+ ++E+I A + IEG+ TA YI LK VK+TR+A+GIP+G + Sbjct: 121 EDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D T+ +A+ R Sbjct: 181 LEYTDVVTLSKALEGRRE 198 >gi|117929222|ref|YP_873773.1| recombination protein RecR [Acidothermus cellulolyticus 11B] gi|171460820|sp|A0LWH7|RECR_ACIC1 RecName: Full=Recombination protein recR gi|117649685|gb|ABK53787.1| DNA replication and repair protein RecR [Acidothermus cellulolyticus 11B] Length = 199 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 127/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L ++PG GP+SA+R H++ + LAE + ++ ++ C+ICG Sbjct: 1 MYEGVIQDLIDELGKLPGIGPKSAQRIAFHILGADPSQVRRLAEVLLDVKERIRFCAICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +V+ VVE+ D+ A+E+++ + YHVLGG++SP+D IGP+D Sbjct: 61 NVAEHEQCRICADPRRDPTVLCVVEEPKDVVAIEKTREFHGRYHVLGGAISPIDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ ++ELI A +EG+ TA Y+ +K + V++TRLA G+P+G +L+ Sbjct: 121 LRIRELLQRLADGTVKELILATDPNLEGEATATYLARLVKPLGVRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 181 YADEVTLGRALEGRRQL 197 >gi|28209847|ref|NP_780791.1| recombination protein RecR [Clostridium tetani E88] gi|73621479|sp|Q899U3|RECR_CLOTE RecName: Full=Recombination protein recR gi|28202282|gb|AAO34728.1| recombination protein recR [Clostridium tetani E88] Length = 198 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++PG G ++A+R TL+++ + + A A+ + CS+ Sbjct: 1 MEFYPIAIEKLIEEFAKLPGIGKKTAQRLTLYVLNLPREEVEEFANALIKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPCAIC + RD + I VVE D+ +E+ + N +YHVL G++SP+ GP Sbjct: 61 CGNFTDKDPCAICSNPNRDKNTICVVEHPKDIMTMEKVREYNGMYHVLHGTISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ LI RI +I+E+I A + +EG+ TA YI LK + K+TR+A+GIP+G + Sbjct: 121 NDIKLKELISRI-NGEIKEVIVATNPNVEGEATAMYISKILKPLGAKVTRIAHGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLAKALEGRKEI 198 >gi|227824063|ref|YP_002828036.1| recombination protein RecR [Sinorhizobium fredii NGR234] gi|254790779|sp|C3MC58|RECR_RHISN RecName: Full=Recombination protein recR gi|227343065|gb|ACP27283.1| recombination protein, RecR [Sinorhizobium fredii NGR234] Length = 201 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 134/201 (66%), Positives = 171/201 (85%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D++RD SVIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SCCGNVDTIDPCTVCTDERRDRSVIIVVEDVADLWALERAAALNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L++R+ +REL+ A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G Sbjct: 121 GPDDLNIKGLVDRVAKGGVRELVIAVNATVEGQTTAHYITDQLEGMEVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT + Sbjct: 181 GELDYLDEGTLTAALRARTTI 201 >gi|225851575|ref|YP_002731808.1| recombination protein RecR [Brucella melitensis ATCC 23457] gi|256264913|ref|ZP_05467445.1| recombination protein recR [Brucella melitensis bv. 2 str. 63/9] gi|254790756|sp|C0RG96|RECR_BRUMB RecName: Full=Recombination protein recR gi|225639940|gb|ACN99853.1| recombination protein RecR [Brucella melitensis ATCC 23457] gi|263095398|gb|EEZ18999.1| recombination protein recR [Brucella melitensis bv. 2 str. 63/9] gi|326408044|gb|ADZ65109.1| recombination protein RecR [Brucella melitensis M28] gi|326537761|gb|ADZ85976.1| recombination protein RecR [Brucella melitensis M5-90] Length = 201 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 124/201 (61%), Positives = 159/201 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LAR+PG GPRSARRA LHL+KKKE LL PL AM KV +C Sbjct: 1 MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAMQEAAEKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D++RD + +IVVEDV+DLWALER+ +N YHVLGG LSPLD I Sbjct: 61 SCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERADTMNVRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ I+E+I A++AT+EGQTTAHYI D+L D+++TRLA+G+P+G Sbjct: 121 GPDDLNIKGLVERVASGAIKEVILAVNATVEGQTTAHYITDQLSNFDMRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT L Sbjct: 181 GELDYLDEGTLAAALRARTTL 201 >gi|302872972|ref|YP_003841605.1| recombination protein RecR [Clostridium cellulovorans 743B] gi|307686513|ref|ZP_07628959.1| recombination protein RecR [Clostridium cellulovorans 743B] gi|302575829|gb|ADL49841.1| recombination protein RecR [Clostridium cellulovorans 743B] Length = 198 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++PG G ++A+R TLH++ ++ + AEA+ + CSI Sbjct: 1 MEFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPKEEVSEFAEALVKARGTIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN TDPC+IC + R+ S+I VVE+ D+ A+E+ + N YHVL G++SP+ GP Sbjct: 61 CGNYTDTDPCSICSNPNRENSIICVVEEPKDIMAVEKVRDFNGTYHVLHGTISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R I+E+I A +A +EG+ TA YI LK DVK+TR+A+G+PMG + Sbjct: 121 NDINLKQLVSR-MKDNIKEIIVATNANVEGEATAMYISKILKPFDVKVTRIAHGLPMGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEITLAKALEGRKEI 198 >gi|254478345|ref|ZP_05091724.1| recombination protein RecR [Carboxydibrachium pacificum DSM 12653] gi|214035703|gb|EEB76398.1| recombination protein RecR [Carboxydibrachium pacificum DSM 12653] Length = 199 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 116/198 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + LI+ L+++PG GP++A+R ++ + L++A+ K+ C I Sbjct: 1 MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC D+ RD S I VV D+ A+E+ K +YHVL G +SP++ +GP Sbjct: 61 CFNIADKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L+ER+ ++E+I A + IEG+ TA YI LK VK+TR+A+GIP+G + Sbjct: 121 EDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D T+ +A+ R Sbjct: 181 LEYTDVVTLSKALEGRRE 198 >gi|167629259|ref|YP_001679758.1| recombination protein recr [Heliobacterium modesticaldum Ice1] gi|229890152|sp|B0TB20|RECR_HELMI RecName: Full=Recombination protein recR gi|167591999|gb|ABZ83747.1| recombination protein recr [Heliobacterium modesticaldum Ice1] Length = 199 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 124/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI+ L+++PG GP++A+R HL+ LA+A+ ++K CS+ Sbjct: 1 MRYYAEPVGRLIEELSKLPGVGPKTAQRLAFHLLHVPRNEAVALAKAIVEAHDKTLYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC IC D RD +VI VVE+ D+ A+E+++ YHVL G+LSP++ +GP Sbjct: 61 CTNLTDRDPCRICSDANRDRAVICVVEEPRDVVAVEKTREYRGHYHVLHGALSPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I L+ R+ +++E+I A + T+EG+ TA Y+ +K + VK+TR+A+G+P+G + Sbjct: 121 EQLRISQLMARLADPELKEVIVATNPTVEGEATAAYLARLIKPMGVKVTRIAHGLPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R L Sbjct: 181 LEYADQVTLLRAMEGRREL 199 >gi|319408025|emb|CBI81679.1| recombination protein RecR [Bartonella schoenbuchensis R1] Length = 201 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 128/201 (63%), Positives = 156/201 (77%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ NKV +C Sbjct: 1 MSQHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKEILLEPLGAAIQEAVNKVSIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGNVDTTDPC IC D +RD + IIVVED++DLWALER+ + A YHVLGG LSPLD I Sbjct: 61 SICGNVDTTDPCLICTDPRRDNTTIIVVEDISDLWALERAGILPARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G Sbjct: 121 GPDELNITSLINRVINDSITEVILAVNATVEGQTTAHYITDQLSNFSIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+R+RT L Sbjct: 181 GELDYLDDGTLAAALRARTNL 201 >gi|310657424|ref|YP_003935145.1| gap repair protein [Clostridium sticklandii DSM 519] gi|308824202|emb|CBH20240.1| gap repair protein [Clostridium sticklandii] Length = 200 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ A++PG G ++A+R H++ + + LA A+ N + CS Sbjct: 1 MDYYSGPISRLIEEFAKLPGVGRKTAQRLAFHVINMDKDQVKALAHAIVEAKNNITYCST 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ +PC+IC R + +I VVED D+ A+ER+K + YHVL G++SP+D I P Sbjct: 61 CCNIADKNPCSICDSPNRTSDIICVVEDPRDVAAMERTKEFHGKYHVLHGTISPMDSITP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + I+ L+ R+ +++E+I A + TIEG+ TA YI +K ++K+TR+A+G+P+G++ Sbjct: 121 DMLKIKELVGRMANPELKEVILATNPTIEGEATAMYIARLIKPFNIKVTRIAHGLPVGAD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 ++Y D+ TI +A+ R + Sbjct: 181 IEYADEVTITKALEGRREI 199 >gi|150392455|ref|YP_001322504.1| recombination protein RecR [Alkaliphilus metalliredigens QYMF] gi|166918734|sp|A6TXC7|RECR_ALKMQ RecName: Full=Recombination protein recR gi|149952317|gb|ABR50845.1| recombination protein RecR [Alkaliphilus metalliredigens QYMF] Length = 199 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 117/199 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI +++PG G ++A+R H++ + L+ ++ + C I Sbjct: 1 MNYYSAPIAKLIDEFSKLPGIGRKTAQRLAFHVISMGYEDAEKLSNSIIEAKKSIKYCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC D R SVI V+ED D+ A+ER++ YHVL G++SPL+ IGP Sbjct: 61 CTNLTDKEVCNICSDPNRKKSVICVIEDPRDVVAMERTREFKGQYHVLHGAISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E+I I+ L+ R++ + E+I A++ IEG+ TA YI LK I +K++R+A+GIP+G + Sbjct: 121 EEINIKELLIRLQEHPVEEVILAMNPNIEGEATAMYIGKLLKPIGIKVSRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLSKALEGRREI 199 >gi|222084331|ref|YP_002542860.1| DNA recombination protein [Agrobacterium radiobacter K84] gi|254790745|sp|B9JGT9|RECR_AGRRK RecName: Full=Recombination protein recR gi|221721779|gb|ACM24935.1| DNA recombination protein [Agrobacterium radiobacter K84] Length = 201 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 131/201 (65%), Positives = 167/201 (83%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D RD SVIIVVEDVADLWALER+ A+NA YHVLGG LSPLD + Sbjct: 61 SRCGNVDTVDPCTVCTDGHRDQSVIIVVEDVADLWALERAAAMNAAYHVLGGVLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+R+ +RE+I A++AT+EGQTTAHYI D+L G++VKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIQRVGEGGVREIIIAVNATVEGQTTAHYITDQLAGLEVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+R+RT + Sbjct: 181 GELDYLDEGTLTAALRARTAI 201 >gi|212637868|ref|YP_002314388.1| recombination protein RecR [Anoxybacillus flavithermus WK1] gi|226737870|sp|B7GFF3|RECR_ANOFW RecName: Full=Recombination protein recR gi|212559348|gb|ACJ32403.1| Recombinational DNA repair protein RecR [Anoxybacillus flavithermus WK1] Length = 198 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG GP++A R ++ KE ++ A+A+ N + CS CG Sbjct: 2 YYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLNMKEDVVLDFAKALVNAKRNLTYCSSCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ DPC IC D +RD S+I VV+D D+ A+E+ K N LYHVL G++SP++ IGPED Sbjct: 62 HITDKDPCYICEDDKRDRSIICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I L+ R++ + ++E+I A + IEG+ TA YI LK VKITR+A+G+P+G +L+ Sbjct: 122 IKIAELLRRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGVKITRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKALEGRREL 198 >gi|168187926|ref|ZP_02622561.1| recombination protein RecR [Clostridium botulinum C str. Eklund] gi|169294228|gb|EDS76361.1| recombination protein RecR [Clostridium botulinum C str. Eklund] Length = 198 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+ Sbjct: 1 MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GP Sbjct: 61 CGNYTDSDPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDINLKGLIRRI-NENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 180 LEYADEVTLSKALEGRVEL 198 >gi|16804739|ref|NP_466224.1| recombination protein RecR [Listeria monocytogenes EGD-e] gi|46908881|ref|YP_015270.1| recombination protein RecR [Listeria monocytogenes serotype 4b str. F2365] gi|47095509|ref|ZP_00233118.1| recombination protein RecR [Listeria monocytogenes str. 1/2a F6854] gi|217966100|ref|YP_002351778.1| recombination protein RecR [Listeria monocytogenes HCC23] gi|224499377|ref|ZP_03667726.1| recombination protein RecR [Listeria monocytogenes Finland 1988] gi|224502888|ref|ZP_03671195.1| recombination protein RecR [Listeria monocytogenes FSL R2-561] gi|226225254|ref|YP_002759361.1| recombination protein recR [Listeria monocytogenes Clip81459] gi|254824933|ref|ZP_05229934.1| recombination protein RecR [Listeria monocytogenes FSL J1-194] gi|254827267|ref|ZP_05231954.1| recombination protein RecR [Listeria monocytogenes FSL N3-165] gi|254830862|ref|ZP_05235517.1| recombination protein RecR [Listeria monocytogenes 10403S] gi|254851993|ref|ZP_05241341.1| recombination protein RecR [Listeria monocytogenes FSL R2-503] gi|254899841|ref|ZP_05259765.1| recombination protein RecR [Listeria monocytogenes J0161] gi|254912953|ref|ZP_05262965.1| recombination protein RecR [Listeria monocytogenes J2818] gi|254931026|ref|ZP_05264385.1| recombination protein RecR [Listeria monocytogenes HPB2262] gi|254937334|ref|ZP_05269031.1| recombination protein RecR [Listeria monocytogenes F6900] gi|254993824|ref|ZP_05276014.1| recombination protein RecR [Listeria monocytogenes FSL J2-064] gi|255025784|ref|ZP_05297770.1| recombination protein RecR [Listeria monocytogenes FSL J2-003] gi|255520361|ref|ZP_05387598.1| recombination protein RecR [Listeria monocytogenes FSL J1-175] gi|284800412|ref|YP_003412277.1| recombination protein RecR [Listeria monocytogenes 08-5578] gi|284993598|ref|YP_003415366.1| recombination protein RecR [Listeria monocytogenes 08-5923] gi|290891884|ref|ZP_06554881.1| recombination protein RecR [Listeria monocytogenes FSL J2-071] gi|300763538|ref|ZP_07073536.1| recombination protein RecR [Listeria monocytogenes FSL N1-017] gi|315283984|ref|ZP_07871984.1| recombination protein RecR [Listeria marthii FSL S4-120] gi|20139467|sp|Q8Y3X7|RECR_LISMO RecName: Full=Recombination protein recR gi|67461443|sp|Q71W69|RECR_LISMF RecName: Full=Recombination protein recR gi|254790773|sp|B8DAT9|RECR_LISMH RecName: Full=Recombination protein recR gi|259563700|sp|C1KZQ7|RECR_LISMC RecName: Full=Recombination protein recR gi|16412202|emb|CAD00915.1| recR [Listeria monocytogenes EGD-e] gi|46882154|gb|AAT05447.1| recombination protein RecR [Listeria monocytogenes serotype 4b str. F2365] gi|47016119|gb|EAL07043.1| recombination protein RecR [Listeria monocytogenes str. 1/2a F6854] gi|217335370|gb|ACK41164.1| recombination protein RecR [Listeria monocytogenes HCC23] gi|225877716|emb|CAS06430.1| Putative recombination protein recR [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599649|gb|EEW12974.1| recombination protein RecR [Listeria monocytogenes FSL N3-165] gi|258605291|gb|EEW17899.1| recombination protein RecR [Listeria monocytogenes FSL R2-503] gi|258609940|gb|EEW22548.1| recombination protein RecR [Listeria monocytogenes F6900] gi|284055974|gb|ADB66915.1| recombination protein RecR [Listeria monocytogenes 08-5578] gi|284059065|gb|ADB70004.1| recombination protein RecR [Listeria monocytogenes 08-5923] gi|290558478|gb|EFD91995.1| recombination protein RecR [Listeria monocytogenes FSL J2-071] gi|293582572|gb|EFF94604.1| recombination protein RecR [Listeria monocytogenes HPB2262] gi|293590954|gb|EFF99288.1| recombination protein RecR [Listeria monocytogenes J2818] gi|293594173|gb|EFG01934.1| recombination protein RecR [Listeria monocytogenes FSL J1-194] gi|300515815|gb|EFK42864.1| recombination protein RecR [Listeria monocytogenes FSL N1-017] gi|307572290|emb|CAR85469.1| recombination protein [Listeria monocytogenes L99] gi|313612374|gb|EFR86516.1| recombination protein RecR [Listeria marthii FSL S4-120] gi|328468182|gb|EGF39188.1| recombination protein RecR [Listeria monocytogenes 1816] gi|328469562|gb|EGF40503.1| recombination protein RecR [Listeria monocytogenes 220] gi|332313133|gb|EGJ26228.1| Recombination protein recR [Listeria monocytogenes str. Scott A] Length = 198 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 122/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP+SA R +++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I E+I A + +EG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKAMEGRRE 197 >gi|228989234|ref|ZP_04149228.1| hypothetical protein bpmyx0001_140 [Bacillus pseudomycoides DSM 12442] gi|228995417|ref|ZP_04155088.1| hypothetical protein bmyco0003_230 [Bacillus mycoides Rock3-17] gi|229003031|ref|ZP_04160889.1| hypothetical protein bmyco0002_240 [Bacillus mycoides Rock1-4] gi|228758231|gb|EEM07418.1| hypothetical protein bmyco0002_240 [Bacillus mycoides Rock1-4] gi|228764343|gb|EEM13219.1| hypothetical protein bmyco0003_230 [Bacillus mycoides Rock3-17] gi|228770509|gb|EEM19079.1| hypothetical protein bpmyx0001_140 [Bacillus pseudomycoides DSM 12442] Length = 198 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+++ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICDDSHRDQSVVCVVQEAKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREI 198 >gi|296131620|ref|YP_003638867.1| recombination protein RecR [Thermincola sp. JR] gi|296030198|gb|ADG80966.1| recombination protein RecR [Thermincola potens JR] Length = 198 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI+ A++PG GP++A+R H++ + LA+A+ N K+ CSIC Sbjct: 2 YYAEPVARLIEEFAKLPGIGPKTAQRLAFHILNSDAESAHGLAKALINAKQKIRYCSICS 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TDPC +C D RD + I VVE D+ A+ER++ LYHVL G++SP+D IGPE Sbjct: 62 NLTDTDPCKLCQDSTRDRNTICVVEQARDVVAIERTREYKGLYHVLHGAISPMDGIGPEQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ER++ ++E+I A + IEG+ TA Y+ LK + V++TR+A+G+P+G +L+ Sbjct: 122 LKIKELLERLQKNSVQEIILATNPNIEGEATAMYLARLLKPMGVRVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A R + Sbjct: 182 YADEVTLSKAFEGRREM 198 >gi|172044114|sp|A0Q3R3|RECR_CLONN RecName: Full=Recombination protein recR Length = 198 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TLH++ + A A+ + CSI Sbjct: 1 MDFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPCAIC + RD S+I V+E D+ +LE+ + N YHVL G +SP+ GP Sbjct: 61 CGNYTDSDPCAICSNPNRDESIICVIEQPKDIMSLEKIREYNGTYHVLHGVISPMSGKGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDINLKGLIRRI-NENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 180 LEYADEVTLSKALEGRVEL 198 >gi|331270684|ref|YP_004397176.1| recombination protein RecR [Clostridium botulinum BKT015925] gi|329127234|gb|AEB77179.1| recombination protein RecR [Clostridium botulinum BKT015925] Length = 201 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 2/202 (0%) Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M IE LI+ A++PG G ++A+R TLH++ + A A+ + Sbjct: 1 MNNLDFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPNDEVREFANALVKARGTIRY 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS+CGN +DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ Sbjct: 61 CSVCGNYTDSDPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 GPEDI ++ LI RI +++E+I A + +EG+ TA YI LK + VK+TR+A+GIP+ Sbjct: 121 KGPEDINLKGLITRI-KGEVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGIPV 179 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L+Y D+ T+ +A+ R L Sbjct: 180 GGDLEYADEVTLSKALEGRVEL 201 >gi|15612599|ref|NP_240902.1| recombination protein RecR [Bacillus halodurans C-125] gi|20139779|sp|Q9KGM3|RECR_BACHD RecName: Full=Recombination protein recR gi|10172648|dbj|BAB03755.1| DNA repair and genetic recombination [Bacillus halodurans C-125] Length = 198 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 128/196 (65%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ R+PG GP++A R +++ KE + A+A+ N+ K+ CS+C N Sbjct: 3 YPEPIAKLIEGFMRLPGIGPKTASRLAFFVLEMKEDDVLDFAKALVNVKRKLTYCSVCHN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D +RD SVI VV+D D+ A+E+ K + YHVL G++SP+D IGPEDI Sbjct: 63 ITDTDPCRICEDSKRDESVICVVQDAKDVIAMEKMKEYHGKYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI+R++ I+E+I A + TIEG+ TA YI +K +K+TR+A+G+P+G +L+Y Sbjct: 123 KIPELIKRLQDDTIQEVIVATNPTIEGEATAMYISRLVKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKAMEGRREL 198 >gi|310639623|ref|YP_003944381.1| recombination protein recr [Paenibacillus polymyxa SC2] gi|309244573|gb|ADO54140.1| Recombination protein RecR [Paenibacillus polymyxa SC2] Length = 199 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 85/196 (43%), Positives = 131/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG GP++A R H++K KE + A+A+ N+ + CS+CGN Sbjct: 3 YPEPIAKLIDAFTRLPGVGPKTAARLAFHVLKMKEDDVIDFAKALVNVKRNLHFCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D+ RDASVI VV+D DL A+ER+K LYHVL G++SP++ IGPEDI Sbjct: 63 ITDTDPCRICQDKTRDASVICVVQDAKDLVAMERTKEFEGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L+ R+ ++++ELI A + IEG+ TA YI ++ ++K+TR+A+G+P+G +L+Y Sbjct: 123 KLKELLTRLSDERVKELILATNPNIEGEATAMYISRLVRPFEIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|307267450|ref|ZP_07548938.1| recombination protein RecR [Thermoanaerobacter wiegelii Rt8.B1] gi|306917531|gb|EFN47817.1| recombination protein RecR [Thermoanaerobacter wiegelii Rt8.B1] Length = 199 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + LI+ L+++PG G ++A+R ++ + + L++A+ + K+ C I Sbjct: 1 MNYYSASLAKLIEELSKLPGIGLKTAQRLAFFIINMPPEEVKSLSQAIIDAKEKIKYCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC D++RD S+I VV D+ A+E+ + +YHVL G +SP++ +GP Sbjct: 61 CYNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L++R++ I+E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G + Sbjct: 121 EDIKIKELLDRVKNGNIKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R L Sbjct: 181 LEYTDIVTLSRALEGRREL 199 >gi|224475613|ref|YP_002633219.1| recombination protein RecR [Staphylococcus carnosus subsp. carnosus TM300] gi|254790783|sp|B9DLF7|RECR_STACT RecName: Full=Recombination protein recR gi|222420220|emb|CAL27034.1| putative recombination protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 198 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 85/196 (43%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL G++SP+D IGPEDI Sbjct: 63 ITEEDPCYICNDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLIER++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPSLIERLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI RT + Sbjct: 183 ADEVTLSRAIEGRTEM 198 >gi|152973873|ref|YP_001373390.1| recombination protein RecR [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189029352|sp|A7GJT7|RECR_BACCN RecName: Full=Recombination protein recR gi|152022625|gb|ABS20395.1| recombination protein RecR [Bacillus cytotoxicus NVH 391-98] Length = 198 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 122/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+++ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICDDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|154684540|ref|YP_001419701.1| recombination protein RecR [Bacillus amyloliquefaciens FZB42] gi|308171913|ref|YP_003918618.1| DNA repair and recombination protein [Bacillus amyloliquefaciens DSM 7] gi|166221921|sp|A7Z0E4|RECR_BACA2 RecName: Full=Recombination protein recR gi|154350391|gb|ABS72470.1| RecR [Bacillus amyloliquefaciens FZB42] gi|307604777|emb|CBI41148.1| DNA repair and recombination protein [Bacillus amyloliquefaciens DSM 7] gi|328551722|gb|AEB22214.1| recombination protein RecR [Bacillus amyloliquefaciens TA208] gi|328909982|gb|AEB61578.1| Recombination protein recR [Bacillus amyloliquefaciens LL3] Length = 198 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CSICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD SVI VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|260589050|ref|ZP_05854963.1| recombination protein RecR [Blautia hansenii DSM 20583] gi|331083244|ref|ZP_08332357.1| recombination protein recR [Lachnospiraceae bacterium 6_1_63FAA] gi|260540829|gb|EEX21398.1| recombination protein RecR [Blautia hansenii DSM 20583] gi|330404325|gb|EGG83870.1| recombination protein recR [Lachnospiraceae bacterium 6_1_63FAA] Length = 199 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ +R+PG G +SA+R H++ ++ + LA A+ N V C Sbjct: 1 MEYYSSHINKLIEEFSRLPGIGAKSAQRLAFHVLNMPKEQVEQLAGAITNAKANVQYCKC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +R+ VI+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CYTLTDQEICPICKNPKRNHQVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L++RI I E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 DDIKLKELMQRISQNDIEEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLLRALEGRVEL 199 >gi|23097486|ref|NP_690952.1| recombination protein RecR [Oceanobacillus iheyensis HTE831] gi|33301529|sp|Q8EU58|RECR_OCEIH RecName: Full=Recombination protein recR gi|22775709|dbj|BAC11987.1| recombination protein (DNA repair and genetic recombination) [Oceanobacillus iheyensis HTE831] Length = 198 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 122/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG GP++A R ++ KE + A A+ + ++ CS+CG Sbjct: 2 YYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ DPCAIC D RD S+I VV+D D+ A+E+ K + YHVL G++SP+D IGPED Sbjct: 62 HITDQDPCAICTDTSRDGSLICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I + LI R++ +++ ELI A + IEG+ TA YI +K ++ TR+A+G+P+G +L+ Sbjct: 122 INVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ +A+ R Sbjct: 182 YADEVTLSKALEGRR 196 >gi|16077089|ref|NP_387902.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str. 168] gi|221307830|ref|ZP_03589677.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str. 168] gi|221312152|ref|ZP_03593957.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317085|ref|ZP_03598379.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str. JH642] gi|221321348|ref|ZP_03602642.1| recombination protein RecR [Bacillus subtilis subsp. subtilis str. SMY] gi|296332938|ref|ZP_06875396.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672719|ref|YP_003864390.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii str. W23] gi|321313689|ref|YP_004205976.1| recombination protein RecR [Bacillus subtilis BSn5] gi|585801|sp|P24277|RECR_BACSU RecName: Full=Recombination protein recR gi|453239|emb|CAA34879.1| recR [Bacillus subtilis] gi|467411|dbj|BAA05257.1| recombination protein [Bacillus subtilis] gi|2632288|emb|CAB11797.1| DNA repair and recombination protein [Bacillus subtilis subsp. subtilis str. 168] gi|291482391|dbj|BAI83466.1| recombination protein RecR [Bacillus subtilis subsp. natto BEST195] gi|296149902|gb|EFG90793.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410962|gb|ADM36080.1| recombination protein RecR [Bacillus subtilis subsp. spizizenii str. W23] gi|320019963|gb|ADV94949.1| recombination protein RecR [Bacillus subtilis BSn5] Length = 198 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE ++ A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD SVI VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|83588903|ref|YP_428912.1| DNA replication and repair protein RecR [Moorella thermoacetica ATCC 39073] gi|123525295|sp|Q2RMH0|RECR_MOOTA RecName: Full=Recombination protein recR gi|83571817|gb|ABC18369.1| DNA replication and repair protein RecR [Moorella thermoacetica ATCC 39073] Length = 199 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 83/197 (42%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI L R+PG GP++A+R HL+K LA A+ K CSICG Sbjct: 2 YYPEPLNKLITALGRLPGIGPKTAQRLAFHLLKVPASEARDLAAAILEARQKTIYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N DPC +C D +RD S I VVE+ D+ ALE+++ LYHVL G++SP+D IGPE Sbjct: 62 NFTDRDPCRLCSDPERDHSCICVVEEARDIIALEKTRQYRGLYHVLQGAISPVDGIGPEQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ K++E+I A +A +EG++TA Y+ LK + VK+TRLAYG+P+G +L+ Sbjct: 122 LRVKELLARLHDGKVKEVILATNADVEGESTALYLDKLLKTLGVKVTRLAYGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 182 YADEVTLARAFAGRHEL 198 >gi|118445158|ref|YP_879265.1| recombination protein RecR [Clostridium novyi NT] gi|118135614|gb|ABK62658.1| recombination protein RecR [Clostridium novyi NT] Length = 201 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 2/202 (0%) Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + IE LI+ A++PG G ++A+R TLH++ + A A+ + Sbjct: 1 MNELDFYPVAIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPSDEVREFANALVKARGTIKY 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CSICGN +DPCAIC + RD S+I V+E D+ +LE+ + N YHVL G +SP+ Sbjct: 61 CSICGNYTDSDPCAICSNPNRDESIICVIEQPKDIMSLEKIREYNGTYHVLHGVISPMSG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 GPEDI ++ LI RI + ++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+ Sbjct: 121 KGPEDINLKGLIRRI-NENVKEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPV 179 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L+Y D+ T+ +A+ R L Sbjct: 180 GGDLEYADEVTLSKALEGRVEL 201 >gi|163938033|ref|YP_001642917.1| recombination protein RecR [Bacillus weihenstephanensis KBAB4] gi|229009535|ref|ZP_04166764.1| hypothetical protein bmyco0001_140 [Bacillus mycoides DSM 2048] gi|229053871|ref|ZP_04195308.1| hypothetical protein bcere0026_140 [Bacillus cereus AH603] gi|229131032|ref|ZP_04259947.1| hypothetical protein bcere0014_130 [Bacillus cereus BDRD-ST196] gi|229165014|ref|ZP_04292812.1| hypothetical protein bcere0007_140 [Bacillus cereus AH621] gi|229890127|sp|A9VN38|RECR_BACWK RecName: Full=Recombination protein recR gi|163860230|gb|ABY41289.1| recombination protein RecR [Bacillus weihenstephanensis KBAB4] gi|228618466|gb|EEK75493.1| hypothetical protein bcere0007_140 [Bacillus cereus AH621] gi|228652427|gb|EEL08349.1| hypothetical protein bcere0014_130 [Bacillus cereus BDRD-ST196] gi|228721481|gb|EEL72998.1| hypothetical protein bcere0026_140 [Bacillus cereus AH603] gi|228751746|gb|EEM01543.1| hypothetical protein bmyco0001_140 [Bacillus mycoides DSM 2048] Length = 198 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICDDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREI 198 >gi|49475042|ref|YP_033083.1| recombination protein RecR [Bartonella henselae str. Houston-1] gi|73621465|sp|Q6G4V2|RECR_BARHE RecName: Full=Recombination protein recR gi|49237847|emb|CAF27042.1| Recombination protein recR [Bartonella henselae str. Houston-1] Length = 201 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 127/201 (63%), Positives = 157/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ KVC+C Sbjct: 1 MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLEPLGAAIQAAVQKVCIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I Sbjct: 61 SVCGNVDTIDPCSICTDPRRDDATIIVVEDIADLWALERAKTLAARYHVLGGKLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I LI+R+ I E+I A++AT+EGQTTAHYI D+L VK+TRLA+G+P+G Sbjct: 121 GPDELNIAPLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFSVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+++RT L Sbjct: 181 GELDYLDDGTLAAALQARTNL 201 >gi|205371941|ref|ZP_03224760.1| recombination protein RecR [Bacillus coahuilensis m4-4] gi|205372025|ref|ZP_03224843.1| recombination protein RecR [Bacillus coahuilensis m4-4] Length = 198 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPITKLIDSFMKLPGIGPKTAARLAFFVLNMKEDTVLEFAKALVNAKRNLGYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RDAS+I VV+D D+ A+E+ K YHVL G++SP++ IGPEDI Sbjct: 63 ITDQDPCYICQDDKRDASIICVVQDPKDVIAMEKMKEFRGKYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R++ ++++E+I A + IEG+ TA YI LK ++ITR+A+G+P+G +L+Y Sbjct: 123 NVPDLLKRLQNEEVQEVILATNPNIEGEATAMYISRLLKPAGIRITRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRRDI 198 >gi|158321872|ref|YP_001514379.1| recombination protein RecR [Alkaliphilus oremlandii OhILAs] gi|166918735|sp|A8MKQ1|RECR_ALKOO RecName: Full=Recombination protein recR gi|158142071|gb|ABW20383.1| recombination protein RecR [Alkaliphilus oremlandii OhILAs] Length = 199 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 118/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ ++PG G ++A+R H++ Q LA+A+ + C + Sbjct: 1 MNYYSASISQLIEEFTKLPGIGRKTAQRLAFHVINMPIQDAHNLADAIVKAKENIKYCKV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC D++RD +I VVED D+ A+ER+K YHVL G++SPL+ IGP Sbjct: 61 CTNLTDQEVCNICSDERRDPLLICVVEDPRDVVAMERTKEFKGYYHVLHGAISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L+ R+ + E+I A + IEG+ TA Y+ LK + +K++R+A+GIP+G + Sbjct: 121 EDIKIKELLVRLSAQSADEVIIATNPNIEGEATAMYLSKLLKPMGIKVSRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLTKALEGRREI 199 >gi|296271479|ref|YP_003654111.1| recombination protein RecR [Thermobispora bispora DSM 43833] gi|296094266|gb|ADG90218.1| recombination protein RecR [Thermobispora bispora DSM 43833] Length = 199 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R H++ + LA+A+ + K+ C ICG Sbjct: 1 MYEGVLQNLIDELGRLPGIGPKSAQRIAFHILGADPVDVKRLAQALLEVKEKIHFCRICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV T D C IC D +RD VI VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D Sbjct: 61 NVATEDECLICRDPRRDDQVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELMARLADGQVNELILATDPNLEGEATATYLARLVKPLGIKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|294496895|ref|YP_003560595.1| recombination protein RecR [Bacillus megaterium QM B1551] gi|295702262|ref|YP_003595337.1| recombination protein RecR [Bacillus megaterium DSM 319] gi|294346832|gb|ADE67161.1| recombination protein RecR [Bacillus megaterium QM B1551] gi|294799921|gb|ADF36987.1| recombination protein RecR [Bacillus megaterium DSM 319] Length = 198 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 78/195 (40%), Positives = 125/195 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMKEDTVLDFAKALVNAKRNLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC DQ+R+ +V+ VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI Sbjct: 63 ITDQDPCYICQDQRRERNVVCVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R++ +I+E+I A + IEG+ TA YI LK +KITR+A+G+P+G +L+Y Sbjct: 123 KVPELLKRLQDDEIQEVILATNPNIEGEATAMYISRLLKPTGIKITRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|90419788|ref|ZP_01227697.1| recombination protein recR [Aurantimonas manganoxydans SI85-9A1] gi|90335829|gb|EAS49577.1| recombination protein recR [Aurantimonas manganoxydans SI85-9A1] Length = 201 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 128/201 (63%), Positives = 166/201 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI++LA++PG GPRSARRA LHLVK++EQLL PL+ AM +KV +C Sbjct: 1 MAKPIAGPEIERLIQLLAKLPGLGPRSARRAALHLVKRREQLLAPLSAAMGEALDKVTIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGN+DT DPC IC D RD S++IVVEDV+DLWALER+KA+NA YHVLGG LSPLD I Sbjct: 61 SVCGNIDTFDPCTICTDGSRDQSIVIVVEDVSDLWALERAKALNAAYHVLGGVLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ER+ ++ELI A++AT+EGQTTAHY+MD+L+G +V++TRLA+G+P+G Sbjct: 121 GPDDLTIRQLVERVHKGGVKELILAVNATVEGQTTAHYLMDQLEGFEVRVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+RSRT L Sbjct: 181 GELDYLDEGTLSAAMRSRTGL 201 >gi|300853307|ref|YP_003778291.1| putative recombination protein RecR [Clostridium ljungdahlii DSM 13528] gi|300433422|gb|ADK13189.1| predicted recombination protein RecR [Clostridium ljungdahlii DSM 13528] Length = 198 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TL+++ + A+A+ N + CS+ Sbjct: 1 MDFYPAAIEKLIEEFAKLPGIGYKTAQRLTLYILNLPGDEVKEFAKALVNARGTIRYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPCAIC + RD SVI VVE D+ A+ER K N +YHVL G++SP+ GP Sbjct: 61 CGNFTDSDPCAICSNPNRDKSVICVVEQPKDIMAMERIKEYNGVYHVLHGNISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ LI RI ++E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G Sbjct: 121 NDIKLKELITRI-NGNVKEVIVATNPNVEGEATAMYISKILKHLGVKVTRIAHGIPVGGN 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEITLSKALEGRVEI 198 >gi|315644461|ref|ZP_07897594.1| recombination protein RecR [Paenibacillus vortex V453] gi|315280211|gb|EFU43504.1| recombination protein RecR [Paenibacillus vortex V453] Length = 199 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 128/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI R+PG GP++A R H++ KE + A+A+ ++ + CS+C Sbjct: 2 YYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSVCC 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TDPC +C D+ RD S I VV+D DL A+ER+K + YHVL G++SP++ IGP++ Sbjct: 62 NITDTDPCRVCQDKTRDPSTICVVQDAKDLVAMERTKEFDGYYHVLHGAISPMEGIGPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++ L+ R+ ++++ELI A +A IEG+ TA YI ++ D+K+TR+A+G+P+G +L+ Sbjct: 122 IRLKELLTRLSDERVKELILATNANIEGEATAMYISRLVRPFDIKVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKALEGRREL 198 >gi|253682739|ref|ZP_04863535.1| recombination protein RecR [Clostridium botulinum D str. 1873] gi|253561061|gb|EES90514.1| recombination protein RecR [Clostridium botulinum D str. 1873] Length = 198 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TLH++ + A A+ + CS+ Sbjct: 1 MDFYPVVIEKLIEEFAKLPGIGYKTAQRLTLHVLNLPNDEVREFANALVKARGTIRYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPCAIC + RD S+I VVE D+ +LE+ + N YHVL G +SP+ GP Sbjct: 61 CGNYTDSDPCAICSNPNRDESIICVVEQPKDIISLEKIREYNGTYHVLHGVISPMSGKGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI +++E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDINLKGLITRI-KGEVKEIIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 180 LEYADEVTLSKALEGRVEL 198 >gi|269836976|ref|YP_003319204.1| recombination protein RecR [Sphaerobacter thermophilus DSM 20745] gi|269786239|gb|ACZ38382.1| recombination protein RecR [Sphaerobacter thermophilus DSM 20745] Length = 201 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 122/201 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ ++T + + LI ++PG GP++A R H+++ + LAEA+ + ++ LC Sbjct: 1 MRSRVTAEPVAKLIDEFGKLPGVGPKTASRLAYHILRSDREEAVALAEAILEVKERIVLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N+ DPC IC D+QRD I VVE+ D+ AL+R+ N LYHVL G LSP+D I Sbjct: 61 STCFNITEHDPCPICSDEQRDRRTICVVEEPLDVVALDRTGEYNGLYHVLHGVLSPVDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + I+ L+ R++ E+I A++ IEG TA YI +L + V +TR A G+P+G Sbjct: 121 GPDRLRIRELVARVQADPPDEVILALNPNIEGDATAMYIARQLLPLGVTVTRPASGLPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 181 GDLEYADEVTLGRALAGRRAL 201 >gi|229083337|ref|ZP_04215697.1| hypothetical protein bcere0022_210 [Bacillus cereus Rock3-44] gi|228699984|gb|EEL52609.1| hypothetical protein bcere0022_210 [Bacillus cereus Rock3-44] Length = 198 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 122/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+++ N + CSICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLDFAKSLVNAKRNLTYCSICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SVI VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICDDSHRDQSVICVVQEAKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|319891432|ref|YP_004148307.1| Recombination protein RecR [Staphylococcus pseudintermedius HKU10-03] gi|317161128|gb|ADV04671.1| Recombination protein RecR [Staphylococcus pseudintermedius HKU10-03] gi|323465398|gb|ADX77551.1| recombination protein RecR [Staphylococcus pseudintermedius ED99] Length = 198 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 82/196 (41%), Positives = 131/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPQPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD S+I VVED D+ A+E+ K LYHVL G++SP+D IGPEDI Sbjct: 63 ITEQDPCYICEDKQRDRSMICVVEDDKDVIAMEKMKEYKGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL+ER++ + ++ELI A++ +EG++TA YI +K + +++TRLA G+ +G +L+Y Sbjct: 123 NIPSLVERLKDEGVKELILAMNPNLEGESTAMYISRLVKPLGIRVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI RT + Sbjct: 183 ADEVTLSRAISGRTEM 198 >gi|15893423|ref|NP_346772.1| recombination protein RecR [Clostridium acetobutylicum ATCC 824] gi|20139611|sp|Q97MR4|RECR_CLOAB RecName: Full=Recombination protein recR gi|15022954|gb|AAK78112.1|AE007525_6 Recombination protein (recR) [Clostridium acetobutylicum ATCC 824] gi|325507535|gb|ADZ19171.1| recombination protein RecR [Clostridium acetobutylicum EA 2018] Length = 198 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++PG G ++A+R T+H++ ++ + A+A+ + CS+ Sbjct: 1 MEFYPVAIEKLIEEFAKLPGVGYKTAQRLTMHVLNLPKEEVEGFADALKKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN TDPCAIC + RD S++ VVE+ D+ ++E+ + N +YHVL G +SP+ GP Sbjct: 61 CGNYTDTDPCAICSNPNRDKSLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I ++ L+ R K++E+I A + ++G+ TA YI LK + VK+TR+A+GIP+G + Sbjct: 121 DSIKLRELVSR-MNGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLAKALEGRREI 198 >gi|121601748|ref|YP_989489.1| recombination protein RecR [Bartonella bacilliformis KC583] gi|166221924|sp|A1UU36|RECR_BARBK RecName: Full=Recombination protein recR gi|120613925|gb|ABM44526.1| recombination protein RecR [Bartonella bacilliformis KC583] Length = 201 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 127/199 (63%), Positives = 156/199 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K ITG EIE LI +LARIPG GPRSARRA LHL+KKKE LL PL A+ + +KV +C Sbjct: 1 MAKHITGPEIERLIHLLARIPGLGPRSARRAALHLIKKKEALLEPLGTAIRDAVDKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGN+DTTDPC+IC D +RD IIVVED++DLWALER+ + A YHVLGG LSPLD I Sbjct: 61 SVCGNIDTTDPCSICTDPRRDNGTIIVVEDISDLWALERAGTLLARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SLI R+ I E+I A++ATIEGQTTAHYI D+L +KITRLA+G+P+G Sbjct: 121 GPDELNITSLINRVIKDPITEIILAVNATIEGQTTAHYITDQLSNFSIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGT+ A+R+RT Sbjct: 181 GELDYLDDGTLAAALRART 199 >gi|319898352|ref|YP_004158445.1| recombination protein RecR [Bartonella clarridgeiae 73] gi|319402316|emb|CBI75855.1| recombination protein RecR [Bartonella clarridgeiae 73] Length = 201 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 130/201 (64%), Positives = 158/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI++LARIPG GPRSARRA LHL+KKKE LL PL A+ NKV +C Sbjct: 1 MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLEPLGSALQETANKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDT DPC+ICID +RD S+IIVVED++DLWALER+K + YHVLGG LSPLD I Sbjct: 61 SVCGNVDTKDPCSICIDPRRDKSIIIVVEDISDLWALERAKILPTRYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G Sbjct: 121 GPDELNITSLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+R+RT L Sbjct: 181 GELDYLDDGTLAAALRARTNL 201 >gi|49473884|ref|YP_031926.1| recombination protein RecR [Bartonella quintana str. Toulouse] gi|73621466|sp|Q6G0M8|RECR_BARQU RecName: Full=Recombination protein recR gi|49239387|emb|CAF25721.1| Recombination protein recR [Bartonella quintana str. Toulouse] Length = 201 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 129/201 (64%), Positives = 161/201 (80%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI++LARIPGFGPRSARRA L+L+KKKE LL PL A+ +KVC+C Sbjct: 1 MSKHIAGPEIERLIQLLARIPGFGPRSARRAALYLIKKKETLLEPLGAAIQAAVDKVCIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDTTDPC+IC D +RD + IIVVEDVADLWALER++ + A YHVLGG LSPLD I Sbjct: 61 SVCGNVDTTDPCSICRDPRRDDTTIIVVEDVADLWALERARTLAARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SL++R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G Sbjct: 121 GPDELNITSLVQRVVQNPIMEIILAVNATVEGQTTAHYITDQLSNFSVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+++RT L Sbjct: 181 GELDYLDDGTLAAALQARTNL 201 >gi|30260215|ref|NP_842592.1| recombination protein RecR [Bacillus anthracis str. Ames] gi|47525276|ref|YP_016625.1| recombination protein RecR [Bacillus anthracis str. 'Ames Ancestor'] gi|49183059|ref|YP_026311.1| recombination protein RecR [Bacillus anthracis str. Sterne] gi|65317487|ref|ZP_00390446.1| COG0353: Recombinational DNA repair protein (RecF pathway) [Bacillus anthracis str. A2012] gi|165873224|ref|ZP_02217835.1| recombination protein RecR [Bacillus anthracis str. A0488] gi|167642054|ref|ZP_02400281.1| recombination protein RecR [Bacillus anthracis str. A0193] gi|170707503|ref|ZP_02897956.1| recombination protein RecR [Bacillus anthracis str. A0389] gi|177655675|ref|ZP_02937000.1| recombination protein RecR [Bacillus anthracis str. A0174] gi|190569334|ref|ZP_03022226.1| recombination protein RecR [Bacillus anthracis Tsiankovskii-I] gi|227812698|ref|YP_002812707.1| recombination protein RecR [Bacillus anthracis str. CDC 684] gi|229603389|ref|YP_002864676.1| recombination protein RecR [Bacillus anthracis str. A0248] gi|254736999|ref|ZP_05194704.1| recombination protein RecR [Bacillus anthracis str. Western North America USA6153] gi|254751188|ref|ZP_05203227.1| recombination protein RecR [Bacillus anthracis str. Vollum] gi|254761658|ref|ZP_05213676.1| recombination protein RecR [Bacillus anthracis str. Australia 94] gi|33301485|sp|Q81W16|RECR_BACAN RecName: Full=Recombination protein recR gi|254790747|sp|C3P9H0|RECR_BACAA RecName: Full=Recombination protein recR gi|254790748|sp|C3LIZ7|RECR_BACAC RecName: Full=Recombination protein recR gi|30253536|gb|AAP24078.1| recombination protein RecR [Bacillus anthracis str. Ames] gi|47500424|gb|AAT29100.1| recombination protein RecR [Bacillus anthracis str. 'Ames Ancestor'] gi|49176986|gb|AAT52362.1| recombination protein RecR [Bacillus anthracis str. Sterne] gi|164711022|gb|EDR16588.1| recombination protein RecR [Bacillus anthracis str. A0488] gi|167509988|gb|EDR85407.1| recombination protein RecR [Bacillus anthracis str. A0193] gi|170127499|gb|EDS96373.1| recombination protein RecR [Bacillus anthracis str. A0389] gi|172080015|gb|EDT65115.1| recombination protein RecR [Bacillus anthracis str. A0174] gi|190559556|gb|EDV13549.1| recombination protein RecR [Bacillus anthracis Tsiankovskii-I] gi|227003148|gb|ACP12891.1| recombination protein RecR [Bacillus anthracis str. CDC 684] gi|229267797|gb|ACQ49434.1| recombination protein RecR [Bacillus anthracis str. A0248] Length = 198 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 120/195 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP+ IGPEDI Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|311070668|ref|YP_003975591.1| recombination protein RecR [Bacillus atrophaeus 1942] gi|310871185|gb|ADP34660.1| recombination protein RecR [Bacillus atrophaeus 1942] Length = 198 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE ++ A+A+ N + CSICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD S+I VV+D D+ A+E+ K N YHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDTRRDKSIICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREM 198 >gi|229542241|ref|ZP_04431301.1| recombination protein RecR [Bacillus coagulans 36D1] gi|229326661|gb|EEN92336.1| recombination protein RecR [Bacillus coagulans 36D1] Length = 198 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 126/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L++ ++PG GP++A R ++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLMESFMKLPGIGPKTAARLAFFVLDMKEDSVLAFAKALVDAKRDLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D +RD SVI VVE+ D+ A+E+ K N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDTDPCYICADPRRDRSVICVVEEPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 SVPDLLKRLRDETVQEVILATNPNIEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREI 198 >gi|30018297|ref|NP_829928.1| recombination protein RecR [Bacillus cereus ATCC 14579] gi|42779103|ref|NP_976350.1| recombination protein RecR [Bacillus cereus ATCC 10987] gi|49478186|ref|YP_034380.1| recombination protein RecR [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145190|ref|YP_081639.1| recombination protein RecR [Bacillus cereus E33L] gi|118475798|ref|YP_892949.1| recombination protein RecR [Bacillus thuringiensis str. Al Hakam] gi|167635028|ref|ZP_02393345.1| recombination protein RecR [Bacillus anthracis str. A0442] gi|170688899|ref|ZP_02880101.1| recombination protein RecR [Bacillus anthracis str. A0465] gi|196036401|ref|ZP_03103798.1| recombination protein RecR [Bacillus cereus W] gi|196041952|ref|ZP_03109239.1| recombination protein RecR [Bacillus cereus NVH0597-99] gi|196047692|ref|ZP_03114896.1| recombination protein RecR [Bacillus cereus 03BB108] gi|206972673|ref|ZP_03233613.1| recombination protein RecR [Bacillus cereus AH1134] gi|206978342|ref|ZP_03239216.1| recombination protein RecR [Bacillus cereus H3081.97] gi|217957601|ref|YP_002336143.1| recombination protein RecR [Bacillus cereus AH187] gi|218235723|ref|YP_002364875.1| recombination protein RecR [Bacillus cereus B4264] gi|218895161|ref|YP_002443572.1| recombination protein RecR [Bacillus cereus G9842] gi|218901226|ref|YP_002449060.1| recombination protein RecR [Bacillus cereus AH820] gi|222093795|ref|YP_002527843.1| recombination protein recr [Bacillus cereus Q1] gi|225862077|ref|YP_002747455.1| recombination protein RecR [Bacillus cereus 03BB102] gi|228898778|ref|ZP_04063062.1| hypothetical protein bthur0014_140 [Bacillus thuringiensis IBL 4222] gi|228905821|ref|ZP_04069720.1| hypothetical protein bthur0013_140 [Bacillus thuringiensis IBL 200] gi|228912763|ref|ZP_04076412.1| hypothetical protein bthur0012_140 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228918975|ref|ZP_04082356.1| hypothetical protein bthur0011_130 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228925278|ref|ZP_04088376.1| hypothetical protein bthur0010_140 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931527|ref|ZP_04094435.1| hypothetical protein bthur0009_220 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228937327|ref|ZP_04099975.1| hypothetical protein bthur0008_140 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228943831|ref|ZP_04106218.1| hypothetical protein bthur0007_140 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228950572|ref|ZP_04112708.1| hypothetical protein bthur0006_140 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956465|ref|ZP_04118263.1| hypothetical protein bthur0005_130 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228963122|ref|ZP_04124293.1| hypothetical protein bthur0004_150 [Bacillus thuringiensis serovar sotto str. T04001] gi|228970213|ref|ZP_04130874.1| hypothetical protein bthur0003_130 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976783|ref|ZP_04137197.1| hypothetical protein bthur0002_130 [Bacillus thuringiensis Bt407] gi|228983280|ref|ZP_04143495.1| hypothetical protein bthur0001_130 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229039929|ref|ZP_04189695.1| hypothetical protein bcere0027_130 [Bacillus cereus AH676] gi|229067788|ref|ZP_04201107.1| hypothetical protein bcere0025_140 [Bacillus cereus F65185] gi|229077297|ref|ZP_04209980.1| hypothetical protein bcere0023_230 [Bacillus cereus Rock4-2] gi|229089157|ref|ZP_04220440.1| hypothetical protein bcere0021_140 [Bacillus cereus Rock3-42] gi|229107710|ref|ZP_04237348.1| hypothetical protein bcere0018_130 [Bacillus cereus Rock1-15] gi|229119687|ref|ZP_04248950.1| hypothetical protein bcere0016_140 [Bacillus cereus 95/8201] gi|229125541|ref|ZP_04254575.1| hypothetical protein bcere0015_130 [Bacillus cereus BDRD-Cer4] gi|229136869|ref|ZP_04265498.1| hypothetical protein bcere0013_150 [Bacillus cereus BDRD-ST26] gi|229142830|ref|ZP_04271274.1| hypothetical protein bcere0012_130 [Bacillus cereus BDRD-ST24] gi|229148433|ref|ZP_04276691.1| hypothetical protein bcere0011_130 [Bacillus cereus m1550] gi|229153804|ref|ZP_04281936.1| hypothetical protein bcere0010_130 [Bacillus cereus ATCC 4342] gi|229159199|ref|ZP_04287225.1| hypothetical protein bcere0009_140 [Bacillus cereus R309803] gi|229176624|ref|ZP_04304030.1| hypothetical protein bcere0005_130 [Bacillus cereus 172560W] gi|229182419|ref|ZP_04309672.1| hypothetical protein bcere0004_140 [Bacillus cereus BGSC 6E1] gi|229188309|ref|ZP_04315360.1| hypothetical protein bcere0002_140 [Bacillus cereus ATCC 10876] gi|229194415|ref|ZP_04321220.1| hypothetical protein bcere0001_130 [Bacillus cereus m1293] gi|254686613|ref|ZP_05150472.1| recombination protein RecR [Bacillus anthracis str. CNEVA-9066] gi|254724166|ref|ZP_05185951.1| recombination protein RecR [Bacillus anthracis str. A1055] gi|254744197|ref|ZP_05201878.1| recombination protein RecR [Bacillus anthracis str. Kruger B] gi|296500858|ref|YP_003662558.1| recombination protein RecR [Bacillus thuringiensis BMB171] gi|301051761|ref|YP_003789972.1| recombination protein R [Bacillus anthracis CI] gi|33301482|sp|Q81JB9|RECR_BACCR RecName: Full=Recombination protein recR gi|73621457|sp|Q73FI4|RECR_BACC1 RecName: Full=Recombination protein recR gi|73621458|sp|Q63HE8|RECR_BACCZ RecName: Full=Recombination protein recR gi|73621461|sp|Q6HPZ0|RECR_BACHK RecName: Full=Recombination protein recR gi|166221922|sp|A0R899|RECR_BACAH RecName: Full=Recombination protein recR gi|226737886|sp|B7JJD6|RECR_BACC0 RecName: Full=Recombination protein recR gi|226738994|sp|B7IS39|RECR_BACC2 RecName: Full=Recombination protein recR gi|226738995|sp|B7HIJ3|RECR_BACC4 RecName: Full=Recombination protein recR gi|226738996|sp|B7HPT6|RECR_BACC7 RecName: Full=Recombination protein recR gi|254790749|sp|C1ES27|RECR_BACC3 RecName: Full=Recombination protein recR gi|254790750|sp|B9IYI9|RECR_BACCQ RecName: Full=Recombination protein recR gi|29893837|gb|AAP07129.1| Recombination protein recR [Bacillus cereus ATCC 14579] gi|42735018|gb|AAS38958.1| recombination protein RecR [Bacillus cereus ATCC 10987] gi|49329742|gb|AAT60388.1| recombination protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978659|gb|AAU20209.1| recombination protein [Bacillus cereus E33L] gi|118415023|gb|ABK83442.1| DNA replication and repair protein RecR [Bacillus thuringiensis str. Al Hakam] gi|167529502|gb|EDR92252.1| recombination protein RecR [Bacillus anthracis str. A0442] gi|170667123|gb|EDT17884.1| recombination protein RecR [Bacillus anthracis str. A0465] gi|195991031|gb|EDX55002.1| recombination protein RecR [Bacillus cereus W] gi|196021477|gb|EDX60180.1| recombination protein RecR [Bacillus cereus 03BB108] gi|196027207|gb|EDX65827.1| recombination protein RecR [Bacillus cereus NVH0597-99] gi|206732393|gb|EDZ49575.1| recombination protein RecR [Bacillus cereus AH1134] gi|206743434|gb|EDZ54867.1| recombination protein RecR [Bacillus cereus H3081.97] gi|217065707|gb|ACJ79957.1| recombination protein RecR [Bacillus cereus AH187] gi|218163680|gb|ACK63672.1| recombination protein RecR [Bacillus cereus B4264] gi|218536247|gb|ACK88645.1| recombination protein RecR [Bacillus cereus AH820] gi|218543855|gb|ACK96249.1| recombination protein RecR [Bacillus cereus G9842] gi|221237841|gb|ACM10551.1| recombination protein [Bacillus cereus Q1] gi|225788575|gb|ACO28792.1| recombination protein RecR [Bacillus cereus 03BB102] gi|228589071|gb|EEK47084.1| hypothetical protein bcere0001_130 [Bacillus cereus m1293] gi|228595177|gb|EEK52945.1| hypothetical protein bcere0002_140 [Bacillus cereus ATCC 10876] gi|228601065|gb|EEK58632.1| hypothetical protein bcere0004_140 [Bacillus cereus BGSC 6E1] gi|228606854|gb|EEK64269.1| hypothetical protein bcere0005_130 [Bacillus cereus 172560W] gi|228624280|gb|EEK81080.1| hypothetical protein bcere0009_140 [Bacillus cereus R309803] gi|228629673|gb|EEK86368.1| hypothetical protein bcere0010_130 [Bacillus cereus ATCC 4342] gi|228635042|gb|EEK91613.1| hypothetical protein bcere0011_130 [Bacillus cereus m1550] gi|228640644|gb|EEK97030.1| hypothetical protein bcere0012_130 [Bacillus cereus BDRD-ST24] gi|228646604|gb|EEL02809.1| hypothetical protein bcere0013_150 [Bacillus cereus BDRD-ST26] gi|228657925|gb|EEL13729.1| hypothetical protein bcere0015_130 [Bacillus cereus BDRD-Cer4] gi|228663778|gb|EEL19355.1| hypothetical protein bcere0016_140 [Bacillus cereus 95/8201] gi|228675750|gb|EEL30956.1| hypothetical protein bcere0018_130 [Bacillus cereus Rock1-15] gi|228694180|gb|EEL47860.1| hypothetical protein bcere0021_140 [Bacillus cereus Rock3-42] gi|228706020|gb|EEL58325.1| hypothetical protein bcere0023_230 [Bacillus cereus Rock4-2] gi|228715341|gb|EEL67198.1| hypothetical protein bcere0025_140 [Bacillus cereus F65185] gi|228727419|gb|EEL78610.1| hypothetical protein bcere0027_130 [Bacillus cereus AH676] gi|228776460|gb|EEM24811.1| hypothetical protein bthur0001_130 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228782945|gb|EEM31109.1| hypothetical protein bthur0002_130 [Bacillus thuringiensis Bt407] gi|228789514|gb|EEM37432.1| hypothetical protein bthur0003_130 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228796578|gb|EEM44015.1| hypothetical protein bthur0004_150 [Bacillus thuringiensis serovar sotto str. T04001] gi|228803222|gb|EEM50042.1| hypothetical protein bthur0005_130 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809115|gb|EEM55598.1| hypothetical protein bthur0006_140 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228815855|gb|EEM62089.1| hypothetical protein bthur0007_140 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822352|gb|EEM68332.1| hypothetical protein bthur0008_140 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228828145|gb|EEM73871.1| hypothetical protein bthur0009_220 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834392|gb|EEM79931.1| hypothetical protein bthur0010_140 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228840690|gb|EEM85950.1| hypothetical protein bthur0011_130 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846890|gb|EEM91893.1| hypothetical protein bthur0012_140 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228853829|gb|EEM98587.1| hypothetical protein bthur0013_140 [Bacillus thuringiensis IBL 200] gi|228860870|gb|EEN05246.1| hypothetical protein bthur0014_140 [Bacillus thuringiensis IBL 4222] gi|296321910|gb|ADH04838.1| recombination protein RecR [Bacillus thuringiensis BMB171] gi|300373930|gb|ADK02834.1| recombination protein R [Bacillus cereus biovar anthracis str. CI] gi|324324014|gb|ADY19274.1| recombination protein RecR [Bacillus thuringiensis serovar finitimus YBT-020] gi|326937817|gb|AEA13713.1| recombination protein RecR [Bacillus thuringiensis serovar chinensis CT-43] Length = 198 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 121/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|226309653|ref|YP_002769547.1| recombination protein RecR [Brevibacillus brevis NBRC 100599] gi|254790755|sp|C0ZHA2|RECR_BREBN RecName: Full=Recombination protein recR gi|226092601|dbj|BAH41043.1| recombination protein RecR [Brevibacillus brevis NBRC 100599] Length = 198 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI ++PG GP++A R ++ KE + LA+A+ N ++ CS+C Sbjct: 2 FYPEPVSKLIDGFMKLPGIGPKTAGRLAFFVLNMKEDDVLDLAKALVNAKRQLHYCSVCN 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D++RD S+I VV++ D+ A+E+++ YHVL G++SP+D IGPED Sbjct: 62 NITDLDPCHICRDKRRDGSIICVVQEPRDVVAMEKTREFEGYYHVLHGAISPMDGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I L++R+ ++++E+I A + IEG+ TA YI +K +++TR+A+G+P+G +L+ Sbjct: 122 IRIPDLLKRLGDEQVKEVILATNPNIEGEATAMYISRLIKPFGIRVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLTKALEGRRDL 198 >gi|167772014|ref|ZP_02444067.1| hypothetical protein ANACOL_03388 [Anaerotruncus colihominis DSM 17241] gi|167665812|gb|EDS09942.1| hypothetical protein ANACOL_03388 [Anaerotruncus colihominis DSM 17241] Length = 199 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 81/193 (41%), Positives = 120/193 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ R+PG G +SA+R +++ A+A+ ++K+ CSIC ++ Sbjct: 7 PLVKLIEQFERLPGIGRKSAQRLAFYVLNLPRDKAQQFADAIVEAHDKIKKCSICQSLTE 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 T+ C IC DQ RDAS I VVE+ D+ A ER++ LYHVL G +SP+D IGPE + I+ Sbjct: 67 TEVCPICSDQSRDASTICVVENSQDVLAFERTREYKGLYHVLHGLISPMDGIGPEQLHIK 126 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ RI + E+I A + T+EG+ TA YI LK + V++TRLAYGIP+G L+Y D+ Sbjct: 127 ELLARISAGGVDEVIMATNPTVEGEATAMYIARLLKPMGVRVTRLAYGIPVGGNLEYADE 186 Query: 189 GTIFEAIRSRTVL 201 T+F A+ R+ L Sbjct: 187 VTLFRALEGRSEL 199 >gi|218671154|ref|ZP_03520825.1| recombination protein RecR [Rhizobium etli GR56] Length = 211 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 133/199 (66%), Positives = 167/199 (83%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ LI+RI IRELI A++AT+EGQTTAHYI D+L+G++VKITRLA+G+P+G Sbjct: 121 GPDDLNIRGLIDRIGEGGIRELIIAVNATVEGQTTAHYITDQLQGLEVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAI-RSR 198 ELDYLD+GT+ A+ + R Sbjct: 181 GELDYLDEGTLAAALRQGR 199 >gi|254520805|ref|ZP_05132861.1| recombination protein RecR [Clostridium sp. 7_2_43FAA] gi|226914554|gb|EEH99755.1| recombination protein RecR [Clostridium sp. 7_2_43FAA] Length = 198 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++P G ++A+R LH++ E + A+A+ + CSI Sbjct: 1 MDFYPVAIEKLIEEFAKLPSVGQKTAQRLALHVLNLPEDEVKEFADALVKARGTIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPC+IC + RD +I VVE D+ +E+ K N YHVL G+LSP+ GP Sbjct: 61 CGNFTDKDPCSICSNPSRDKDIICVVEQPKDIMTMEKVKEYNGAYHVLHGNLSPMQGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R ++E+I A + IEG+ TA YI LK +D+K+TR+A GIP+G + Sbjct: 121 QDIRIRELVAR-MSADVKEVIIATNPNIEGEATAMYISRILKPLDIKVTRIASGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLSKALEGRKEI 198 >gi|229027872|ref|ZP_04184029.1| hypothetical protein bcere0028_140 [Bacillus cereus AH1271] gi|228733448|gb|EEL84273.1| hypothetical protein bcere0028_140 [Bacillus cereus AH1271] Length = 198 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 121/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ +GPEDI Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGVGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|291562957|emb|CBL41773.1| recombination protein RecR [butyrate-producing bacterium SS3/4] Length = 199 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 125/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G ++A+R H++ E+ + L+ ++ + + V C Sbjct: 1 MDYYSSQISKLIEELSKLPGIGNKTAQRLAFHIINMPEEQVERLSSSIRDAKHNVHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC Q RD SVI+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDQELCPICRSQTRDHSVIMVVENPRDLAAYEKTGKFDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R++ ++++E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 GDIKLKELMMRLQTEEVKEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLLRALEGRVEL 199 >gi|229170874|ref|ZP_04298479.1| hypothetical protein bcere0006_140 [Bacillus cereus MM3] gi|228612609|gb|EEK69826.1| hypothetical protein bcere0006_140 [Bacillus cereus MM3] Length = 198 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 121/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD S++ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICNDSHRDQSIVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|319779803|ref|YP_004139279.1| recombination protein RecR [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165691|gb|ADV09229.1| recombination protein RecR [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 201 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 128/199 (64%), Positives = 165/199 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLA AMA +KV +C Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLLSPLAAAMAEAADKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT+DPC IC D +RDA IIVVEDV+DLWALER+ A+N YHVLGG+LSPLD I Sbjct: 61 STCGNVDTSDPCMICTDPRRDAGTIIVVEDVSDLWALERAAAMNVRYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + ++SL++R+ +++E+I A++AT+EGQTTAHY+ D+L G D+K+TRLA+G+P+G Sbjct: 121 GPEQLNMRSLVDRVAGGEVKEIILAVNATVEGQTTAHYLTDQLSGFDIKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+RSRT Sbjct: 181 GELDYLDEGTLAAALRSRT 199 >gi|221632238|ref|YP_002521459.1| recombination protein RecR [Thermomicrobium roseum DSM 5159] gi|221157067|gb|ACM06194.1| recombination protein RecR [Thermomicrobium roseum DSM 5159] Length = 201 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 123/201 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + + I LI+ A++PG GP++A R HL++ + LA+A+ + +V LC Sbjct: 1 MRARGPAEPIARLIEEFAKLPGIGPKTASRLAYHLLRCSREDALALAQAIIEVKERVQLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N+ DPC IC D RD I VVED D+ ALER+ A + +YHVL G +SP+D I Sbjct: 61 SRCFNLTDVDPCPICADPSRDQRTICVVEDPLDVLALERTGAYHGVYHVLHGVISPVDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I+ L+ R++ ++ E+I A++ IEG TA YI +L + V +TR A G+P+G Sbjct: 121 GPERLRIRELVHRVQQEQPNEVILALNPNIEGDATAMYIARQLIPLGVTVTRPASGLPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 181 GDLEYADEITLGRALAGRRAL 201 >gi|126652953|ref|ZP_01725095.1| recombination protein RecR [Bacillus sp. B14905] gi|126590283|gb|EAZ84405.1| recombination protein RecR [Bacillus sp. B14905] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 127/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG GP++A R ++ KE+ + ++A+ + + CS+CG Sbjct: 2 YYPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEEDVLSFSKALVDAKRNLSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPED Sbjct: 62 NITDVDPCHICTDKQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I + SL+ R+ + ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+ Sbjct: 122 INVASLLVRLHDESVQELILATNSTIEGEATAMYISRLVKPSGIRATRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKAMEGRREL 198 >gi|326329508|ref|ZP_08195831.1| recombination protein RecR [Nocardioidaceae bacterium Broad-1] gi|325952675|gb|EGD44692.1| recombination protein RecR [Nocardioidaceae bacterium Broad-1] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 120/195 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL++ + LA + + KV CS+C Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLQADPADVHRLASILNEVKAKVKFCSVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +R+ SV+ VVE+ D+ A+ER++ YHVLGG++SP+D IGP+ Sbjct: 61 NVSEEETCRICRDPRREQSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGIGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ I E+I A +EG+ TA Y+ +L + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELVQRLNDPGITEVILATDPNLEGEATATYLTRQLSPLGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFAGRR 195 >gi|89100951|ref|ZP_01173797.1| recombination protein RecR [Bacillus sp. NRRL B-14911] gi|89084322|gb|EAR63477.1| recombination protein RecR [Bacillus sp. NRRL B-14911] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 81/195 (41%), Positives = 124/195 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLSYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC DQ+RD SVI V++D D+ A+E+ K N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDQRRDRSVICVLQDPKDVIAMEKMKEFNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + + E+I A + IEG+ TA YI LK +KITR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDETVEEVILATNPNIEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|163867526|ref|YP_001608725.1| recombination protein RecR [Bartonella tribocorum CIP 105476] gi|189029353|sp|A9IMX8|RECR_BART1 RecName: Full=Recombination protein recR gi|161017172|emb|CAK00730.1| recombination protein RecR [Bartonella tribocorum CIP 105476] Length = 201 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 127/201 (63%), Positives = 157/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI+ILAR+PG GPRSARRA LHL+KKKE LL PL A+ KV +C Sbjct: 1 MSKYIAGPEIERLIQILARLPGLGPRSARRAALHLIKKKETLLEPLGAAVQAAIEKVGIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I Sbjct: 61 SVCGNVDTIDPCSICTDSRRDDTTIIVVEDIADLWALERAKTLAARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I +LI+R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G Sbjct: 121 GPDELNIATLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFPVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+++RT L Sbjct: 181 GELDYLDDGTLAAAVQARTNL 201 >gi|269129056|ref|YP_003302426.1| recombination protein RecR [Thermomonospora curvata DSM 43183] gi|268314014|gb|ACZ00389.1| recombination protein RecR [Thermomonospora curvata DSM 43183] Length = 199 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R HL+ + LA+A+ + +KV C +CG Sbjct: 1 MYEGVVQNLIDELGRLPGIGPKSAQRIAFHLLAADPADVDRLAKALKEVKDKVRFCRVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+E+++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEEEECRICRDPRRDPAVICVVEESKDVVAIEKTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ + ELI A +EG+ TA Y+ +K +++K+TRLA G+P+G +L+ Sbjct: 121 LRIRELMQRLADGTVTELILATDPNLEGEATATYLARLVKPLNLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|52078516|ref|YP_077307.1| recombination protein RecR [Bacillus licheniformis ATCC 14580] gi|52783879|ref|YP_089708.1| recombination protein RecR [Bacillus licheniformis ATCC 14580] gi|319648544|ref|ZP_08002759.1| recombination protein recR [Bacillus sp. BT1B_CT2] gi|73621462|sp|Q65PJ9|RECR_BACLD RecName: Full=Recombination protein recR gi|52001727|gb|AAU21669.1| DNA repair protein RecR [Bacillus licheniformis ATCC 14580] gi|52346381|gb|AAU39015.1| RecR [Bacillus licheniformis ATCC 14580] gi|317389392|gb|EFV70204.1| recombination protein recR [Bacillus sp. BT1B_CT2] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE ++ A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMKEDVVLDFAKALVNAKRNLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y Sbjct: 123 KIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREM 198 >gi|323136738|ref|ZP_08071819.1| recombination protein RecR [Methylocystis sp. ATCC 49242] gi|322398055|gb|EFY00576.1| recombination protein RecR [Methylocystis sp. ATCC 49242] Length = 201 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 116/200 (58%), Positives = 158/200 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +++ G EIE L+++LAR+PG GPRSARRA LHL++K+E+LL PL++AM ++ C Sbjct: 1 MAERVAGPEIERLVQLLARLPGLGPRSARRAALHLIRKREELLAPLSDAMRVAQERIVSC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGN+DT+DPC IC D +RD S+++VVE VADLWALER+ +NA YHVLGG LSPLD + Sbjct: 61 SVCGNIDTSDPCTICRDARRDPSILVVVETVADLWALERAGLLNARYHVLGGVLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I SLIER+ +IRE++ A++AT++GQTTAHYI D L VK+TRLA+G+P+G Sbjct: 121 GPDDLTIASLIERVRAGEIREIVLAVNATVDGQTTAHYIADLLSPFGVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ A+ RT Sbjct: 181 GELDYLDEGTLAAALERRTS 200 >gi|289551724|ref|YP_003472628.1| Recombination protein RecR [Staphylococcus lugdunensis HKU09-01] gi|315660108|ref|ZP_07912966.1| recombination protein R [Staphylococcus lugdunensis M23590] gi|289181255|gb|ADC88500.1| Recombination protein RecR [Staphylococcus lugdunensis HKU09-01] gi|315495009|gb|EFU83346.1| recombination protein R [Staphylococcus lugdunensis M23590] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 85/196 (43%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLNMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD +VI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRTVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLIER++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPSLIERLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|242372723|ref|ZP_04818297.1| recombination protein RecR [Staphylococcus epidermidis M23864:W1] gi|242349640|gb|EES41241.1| recombination protein RecR [Staphylococcus epidermidis M23864:W1] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 82/196 (41%), Positives = 131/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+++ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKSLVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SV+ VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVVCVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPALVERLKSDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|302390661|ref|YP_003826482.1| DNA replication and repair protein RecR [Thermosediminibacter oceani DSM 16646] gi|302201289|gb|ADL08859.1| DNA replication and repair protein RecR [Thermosediminibacter oceani DSM 16646] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 124/199 (62%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ L+R+PG GP++A+R +++K L +A+A + CS+ Sbjct: 1 MGYYAEPIARLIEELSRLPGIGPKTAQRLAFYILKMPADRAARLVQAIAGARESIVYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPC+IC RD + I+VVED D+ A+E+++ LYHVL G +SPL+ IGP Sbjct: 61 CGNFTDVDPCSICNAPHRDRNTIMVVEDPKDVVAIEKTRDYKGLYHVLHGVISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R+ ++E+I A + +EG+ TA YI LK + +K+TR+A+GIPMG + Sbjct: 121 DDIRIKELLARV-ASGVKEVIIATNPDVEGEATALYIARLLKPLGLKVTRIAHGIPMGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 LDY D+ T+ +A+ R L Sbjct: 180 LDYADEITLAKALEGRREL 198 >gi|229015427|ref|ZP_04172430.1| hypothetical protein bcere0030_250 [Bacillus cereus AH1273] gi|229021632|ref|ZP_04178220.1| hypothetical protein bcere0029_140 [Bacillus cereus AH1272] gi|229074085|ref|ZP_04207134.1| hypothetical protein bcere0024_140 [Bacillus cereus Rock4-18] gi|229094745|ref|ZP_04225753.1| hypothetical protein bcere0020_140 [Bacillus cereus Rock3-29] gi|229100811|ref|ZP_04231629.1| hypothetical protein bcere0019_230 [Bacillus cereus Rock3-28] gi|229113699|ref|ZP_04243136.1| hypothetical protein bcere0017_140 [Bacillus cereus Rock1-3] gi|228669765|gb|EEL25170.1| hypothetical protein bcere0017_140 [Bacillus cereus Rock1-3] gi|228682618|gb|EEL36677.1| hypothetical protein bcere0019_230 [Bacillus cereus Rock3-28] gi|228688683|gb|EEL42553.1| hypothetical protein bcere0020_140 [Bacillus cereus Rock3-29] gi|228709048|gb|EEL61172.1| hypothetical protein bcere0024_140 [Bacillus cereus Rock4-18] gi|228739678|gb|EEL90086.1| hypothetical protein bcere0029_140 [Bacillus cereus AH1272] gi|228745869|gb|EEL95868.1| hypothetical protein bcere0030_250 [Bacillus cereus AH1273] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 121/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD +V+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICDDSHRDQTVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|223043449|ref|ZP_03613495.1| recombination protein RecR [Staphylococcus capitis SK14] gi|314935110|ref|ZP_07842469.1| recombination protein RecR [Staphylococcus caprae C87] gi|222443238|gb|EEE49337.1| recombination protein RecR [Staphylococcus capitis SK14] gi|313653040|gb|EFS16803.1| recombination protein RecR [Staphylococcus caprae C87] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 131/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICQDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPALVERLKSDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|51891153|ref|YP_073844.1| recombination protein RecR [Symbiobacterium thermophilum IAM 14863] gi|73621522|sp|Q67TJ3|RECR_SYMTH RecName: Full=Recombination protein recR gi|51854842|dbj|BAD39000.1| recombination protein [Symbiobacterium thermophilum IAM 14863] Length = 198 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ L ++PG GP++A+R H++ + ++ +A + KV CS+C Sbjct: 2 YYAEPIARLIEELTKLPGIGPKTAQRLAFHILHMEPSVVEGIARTLVEARAKVKYCSVCC 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD S I VV++ D+ A+E+++ + +YHVL G+L+P++ IG +D Sbjct: 62 NLTDQDPCQICADDGRDHSTICVVQEPRDVVAMEKTREYHGVYHVLHGALNPMEGIGIDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++ L+ R+ +++E+I + EG+TTA YI +K + VK+TR+A G+PMG +L+ Sbjct: 122 IRVKELVARLGDGRVQEVILCTNPNTEGETTAMYIARYIKPLGVKVTRIARGLPMGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R + Sbjct: 182 YADEVTLAKALEGRREI 198 >gi|261404009|ref|YP_003240250.1| recombination protein RecR [Paenibacillus sp. Y412MC10] gi|329930213|ref|ZP_08283826.1| recombination protein RecR [Paenibacillus sp. HGF5] gi|261280472|gb|ACX62443.1| recombination protein RecR [Paenibacillus sp. Y412MC10] gi|328935235|gb|EGG31716.1| recombination protein RecR [Paenibacillus sp. HGF5] Length = 199 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 129/197 (65%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI R+PG GP++A R H++ KE + A+A+ ++ + CS+C Sbjct: 2 YYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNLHYCSVCC 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TDPC +C D+ RDAS+I VV+D DL A+ER+K YHVL G++SP++ IGP++ Sbjct: 62 NITDTDPCRVCQDKTRDASIICVVQDAKDLVAMERTKEFEGYYHVLHGAISPMEGIGPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++ L+ R+ ++++ELI A +A IEG+ TA YI ++ D+K+TR+A+G+P+G +L+ Sbjct: 122 IRLKELLTRLSDERVKELILATNANIEGEATAMYISRLVRPFDIKVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKALEGRREL 198 >gi|118590528|ref|ZP_01547930.1| recombination protein RecR [Stappia aggregata IAM 12614] gi|118436991|gb|EAV43630.1| recombination protein RecR [Stappia aggregata IAM 12614] Length = 202 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 126/200 (63%), Positives = 163/200 (81%), Gaps = 1/200 (0%) Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M +K + G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PLAEAM ++ + Sbjct: 1 MAQKSVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLAEAMGIAVREIGI 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS CG VDT+DPC IC D +RD SV++VVEDVADLWALER+ AVNA YHVLGG+LSPLD Sbjct: 61 CSTCGTVDTSDPCTICSDPKRDQSVLVVVEDVADLWALERAGAVNARYHVLGGNLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGP+D+ + SLI+R + E+I AI+AT+EGQTTAHYIMD+L ++V +TRLA+G+P+ Sbjct: 121 IGPDDLNLASLIDRCGSEGFSEVILAINATVEGQTTAHYIMDQLSHLEVNVTRLAHGVPV 180 Query: 180 GSELDYLDDGTIFEAIRSRT 199 G ELDYLD+GT+ +A+R+RT Sbjct: 181 GGELDYLDEGTLAQALRART 200 >gi|297193078|ref|ZP_06910476.1| recombination protein recR [Streptomyces pristinaespiralis ATCC 25486] gi|197719792|gb|EDY63700.1| recombination protein recR [Streptomyces pristinaespiralis ATCC 25486] Length = 199 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLAHALLEVKDKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQQEQCNICRDPRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|220927702|ref|YP_002504611.1| recombination protein RecR [Clostridium cellulolyticum H10] gi|254790761|sp|B8I551|RECR_CLOCE RecName: Full=Recombination protein recR gi|219998030|gb|ACL74631.1| recombination protein RecR [Clostridium cellulolyticum H10] Length = 199 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 120/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I L++ ++PG G +SA+R H++ + + L+E++ K CS+ Sbjct: 1 MEYYAVPIAKLVEEFQKLPGIGHKSAQRLAFHVINLPMEKVQKLSESILEAKQKTRYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC +C RD +VI VV+D D+ A+ER++ LYHVL G++SP+ IGP Sbjct: 61 CSNLTDIDPCPLCSGTSRDKTVICVVQDPRDVVAMERTREFKGLYHVLHGAISPMQGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E+I I+ LI R+ ++E+I A + +EG+ TA YI +K + VK TR+A+GIP+G + Sbjct: 121 EEIRIKELITRLGSGDVKEVILATNPNVEGEATAMYISKLIKPLGVKATRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLAKALEGRREI 199 >gi|323705218|ref|ZP_08116794.1| recombination protein RecR [Thermoanaerobacterium xylanolyticum LX-11] gi|323535644|gb|EGB25419.1| recombination protein RecR [Thermoanaerobacterium xylanolyticum LX-11] Length = 199 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 119/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI L+R+PG G ++A+R +++ + L+ A+ N + C Sbjct: 1 MNVYSRSLSRLIDELSRLPGIGRKTAQRLAFYILDMPLDDVVNLSNAILEAKNNLRYCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N ++ C+IC D+ RD I VV D D+ A+E+++ LYHVL G++SP+D IGP Sbjct: 61 CYNFTDSELCSICSDETRDTHTICVVSDPKDVVAMEKTREYRGLYHVLHGAISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L+ERI+ +I E+I A + IEG+ TA YI +K +K+TR+A+G+P+G + Sbjct: 121 EDIKIKELLERIKDAEINEIILATNPDIEGEATAMYIAKLIKPFGIKVTRIAHGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYTDSVTLSRALEGRREM 199 >gi|315305096|ref|ZP_07875119.1| recombination protein RecR [Listeria ivanovii FSL F6-596] gi|313626537|gb|EFR95647.1| recombination protein RecR [Listeria ivanovii FSL F6-596] Length = 198 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 122/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD S+I VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDKDPCYICADTSRDQSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I E+I A + +EG+ TA YI LK +KITR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKAMEGRRE 197 >gi|295402710|ref|ZP_06812652.1| recombination protein RecR [Geobacillus thermoglucosidasius C56-YS93] gi|312109171|ref|YP_003987487.1| recombination protein RecR [Geobacillus sp. Y4.1MC1] gi|294975241|gb|EFG50877.1| recombination protein RecR [Geobacillus thermoglucosidasius C56-YS93] gi|311214272|gb|ADP72876.1| recombination protein RecR [Geobacillus sp. Y4.1MC1] Length = 198 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 126/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ + + C+ICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLTMKEDTVLEFAKALVDAKRNIRYCTICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D++RD + I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 KIAELLKRLQDEAVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|56418554|ref|YP_145872.1| recombination protein RecR [Geobacillus kaustophilus HTA426] gi|297528394|ref|YP_003669669.1| recombination protein RecR [Geobacillus sp. C56-T3] gi|73621486|sp|Q5L3X4|RECR_GEOKA RecName: Full=Recombination protein recR gi|56378396|dbj|BAD74304.1| DNA repair and genetic recombination protein [Geobacillus kaustophilus HTA426] gi|297251646|gb|ADI25092.1| recombination protein RecR [Geobacillus sp. C56-T3] Length = 198 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 126/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG+ Sbjct: 3 YPEPLSKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D++RD + I VV+D D+ A+ER K N LYHVL G++SP++ IGPEDI Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMERMKEYNGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R++ + ++E+I A IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 KIAELLTRLQDETVQEVILATDPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|326203228|ref|ZP_08193093.1| recombination protein RecR [Clostridium papyrosolvens DSM 2782] gi|325986486|gb|EGD47317.1| recombination protein RecR [Clostridium papyrosolvens DSM 2782] Length = 199 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 120/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + L++ ++PG G +SA+R H++ + + L+E++ K CS+ Sbjct: 1 MEYYAVPVAKLVEEFQKLPGIGHKSAQRLAFHVINMPMEKVQKLSESILEAKQKTRYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC +C RD +VI VV+D D+ A+ER++ LYHVL G++SP+ IGP Sbjct: 61 CSNLTDVDPCPLCSGTSRDKTVICVVQDPRDVVAMERTREFKGLYHVLHGAISPMQGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E+I I+ LI R+ ++ E+I A + +EG+ TA YI +K + VK TR+A+GIP+G + Sbjct: 121 EEIRIKELIARLGSGEVTEVILATNPNVEGEATAMYISKLIKPLGVKATRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLAKALEGRREI 199 >gi|255527110|ref|ZP_05393998.1| recombination protein RecR [Clostridium carboxidivorans P7] gi|296187899|ref|ZP_06856292.1| recombination protein RecR [Clostridium carboxidivorans P7] gi|255509212|gb|EET85564.1| recombination protein RecR [Clostridium carboxidivorans P7] gi|296047520|gb|EFG86961.1| recombination protein RecR [Clostridium carboxidivorans P7] Length = 198 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R T+H++ + + AEA+ + CSI Sbjct: 1 MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTIHVLNLPGEEVKEFAEALIKARGTIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPCA+C + RD S I VVE D+ A+E+ K N +YHVL G++SP+ GP Sbjct: 61 CGNFTDSDPCAVCSNPNRDKSTICVVEQPKDIIAIEKVKEFNGVYHVLHGNISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI +++E+I A + IEG+ TA YI LK ++VK+TR+A+GIP+G + Sbjct: 121 EDIKLKELIRRI-NGEVKEVIVATNPNIEGEATAMYISKVLKPLEVKVTRIAHGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +AI R + Sbjct: 180 LEYADEVTLAKAIEGRKEI 198 >gi|251794182|ref|YP_003008913.1| recombination protein RecR [Paenibacillus sp. JDR-2] gi|247541808|gb|ACS98826.1| recombination protein RecR [Paenibacillus sp. JDR-2] Length = 199 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI R+PG GP++A R H+++ KE + A+A+ ++ + CS+C Sbjct: 2 FYPEPIAKLIDAFTRLPGVGPKTAARLAFHVLRMKEDDVIDFAKALVSVKRNLTYCSVCC 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TDPC IC D+ RD SVI VV++ DL A+ER+K YHVL G++SP++ IGP+ Sbjct: 62 NITDTDPCRICQDKTRDNSVICVVQESKDLVAMERTKEFQGFYHVLQGAISPIEGIGPDQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I L+ R+ ++++ELI A + IEG+ TA YI +K +++TR+A+G+P+G +L+ Sbjct: 122 IKIAELLRRLSDERVQELILATNPNIEGEATAMYISRLVKPFGIRVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKALEGRREL 198 >gi|299542066|ref|ZP_07052382.1| recombination protein RecR [Lysinibacillus fusiformis ZC1] gi|298725381|gb|EFI66029.1| recombination protein RecR [Lysinibacillus fusiformis ZC1] Length = 198 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 127/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG GP++A R ++ KE + ++A+ + + CS+CG Sbjct: 2 YYPEPISKLIDSFMKLPGIGPKTAARLAFFVLTMKEDDVLSFSKALIDAKRNLSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPED Sbjct: 62 NITDVDPCHICTDKQRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I + SL+ R++ + ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+ Sbjct: 122 INVASLLVRLQNESVQELILATNSTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKAMEGRREL 198 >gi|116874069|ref|YP_850850.1| recombination protein RecR [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461474|sp|A0AM39|RECR_LISW6 RecName: Full=Recombination protein recR gi|116742947|emb|CAK22071.1| recombination protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 198 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 122/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDKDPCYICSDTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I E+I A + +EG+ TA YI L+ +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKAMEGRRE 197 >gi|239825605|ref|YP_002948229.1| recombination protein RecR [Geobacillus sp. WCH70] gi|259563698|sp|C5D347|RECR_GEOSW RecName: Full=Recombination protein recR gi|239805898|gb|ACS22963.1| recombination protein RecR [Geobacillus sp. WCH70] Length = 198 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 127/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+++ ++ + C++CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAIRLAFFVLTMKEDTVLEFAKSLVDVKRNIRYCTVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D++RD + I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 KIAELLKRLQDEAVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|323487367|ref|ZP_08092666.1| hypothetical protein HMPREF9474_04417 [Clostridium symbiosum WAL-14163] gi|323694198|ref|ZP_08108374.1| recombination protein RecR [Clostridium symbiosum WAL-14673] gi|323399328|gb|EGA91727.1| hypothetical protein HMPREF9474_04417 [Clostridium symbiosum WAL-14163] gi|323501671|gb|EGB17557.1| recombination protein RecR [Clostridium symbiosum WAL-14673] Length = 199 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ + + L+ AM + + V CS Sbjct: 1 MDYYSNQITKLIEELSKLPGIGSKSAQRLAFHIINMPSEQVERLSSAMVDAKHNVRYCSE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +RD I+VVE+ DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CFTLTDKELCPICSSDRRDHGTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R++ ++E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 NDIRLKELMTRLQKDDVKEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 181 LEYIDEVTLLRALDGRTEL 199 >gi|311028954|ref|ZP_07707044.1| recombination protein RecR [Bacillus sp. m3-13] Length = 198 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLNMKEDTVLDFAKALVNAKRNLSYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD ++I VV++ D+ A+E+ + N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDRDPCYICEDNRRDRTIICVVQETKDVIAMEKMRDYNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI+R++ +++ELI A + IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 KIPELIKRLQDDEVQELILATNPNIEGEATAMYISRLLKPSGIKMTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREI 198 >gi|16801910|ref|NP_472178.1| recombination protein RecR [Listeria innocua Clip11262] gi|20139521|sp|Q927D9|RECR_LISIN RecName: Full=Recombination protein recR gi|16415385|emb|CAC98076.1| recR [Listeria innocua Clip11262] gi|313616686|gb|EFR89470.1| recombination protein RecR [Listeria innocua FSL S4-378] Length = 198 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 122/195 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDKDPCYICSDTSRDRSVLCVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I E+I A + +EG+ TA YI L+ +K+TR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKAMEGRRE 197 >gi|261417518|ref|YP_003251200.1| recombination protein RecR [Geobacillus sp. Y412MC61] gi|319765176|ref|YP_004130677.1| recombination protein RecR [Geobacillus sp. Y412MC52] gi|261373975|gb|ACX76718.1| recombination protein RecR [Geobacillus sp. Y412MC61] gi|317110042|gb|ADU92534.1| recombination protein RecR [Geobacillus sp. Y412MC52] Length = 198 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 126/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG+ Sbjct: 3 YPEPLSKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D++RD + I VV+D D+ A+ER K N LYHVL G++SP++ IGPEDI Sbjct: 63 ITDTDPCYICKDERRDRTTICVVQDPKDVIAMERMKEYNGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R++ + I+E+I A IEG+ TA YI LK +K+TR+A+G+P+G +L+Y Sbjct: 123 KIAELLTRLQDETIQEVILATDPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|27469223|ref|NP_765860.1| recombination protein RecR [Staphylococcus epidermidis ATCC 12228] gi|57866112|ref|YP_187712.1| recombination protein RecR [Staphylococcus epidermidis RP62A] gi|242243367|ref|ZP_04797812.1| recombination protein RecR [Staphylococcus epidermidis W23144] gi|251811245|ref|ZP_04825718.1| recombination protein RecR [Staphylococcus epidermidis BCM-HMP0060] gi|282874601|ref|ZP_06283483.1| recombination protein RecR [Staphylococcus epidermidis SK135] gi|293367697|ref|ZP_06614349.1| recombination protein R [Staphylococcus epidermidis M23864:W2(grey)] gi|33301520|sp|Q8CMS3|RECR_STAES RecName: Full=Recombination protein recR gi|71152040|sp|Q5HRS7|RECR_STAEQ RecName: Full=Recombination protein recR gi|27316772|gb|AAO05947.1|AE016751_242 recombination protein [Staphylococcus epidermidis ATCC 12228] gi|57636770|gb|AAW53558.1| recombination protein RecR [Staphylococcus epidermidis RP62A] gi|242233316|gb|EES35628.1| recombination protein RecR [Staphylococcus epidermidis W23144] gi|251805206|gb|EES57863.1| recombination protein RecR [Staphylococcus epidermidis BCM-HMP0060] gi|281296525|gb|EFA89037.1| recombination protein RecR [Staphylococcus epidermidis SK135] gi|291318267|gb|EFE58661.1| recombination protein R [Staphylococcus epidermidis M23864:W2(grey)] gi|319399735|gb|EFV87983.1| recombination protein RecR [Staphylococcus epidermidis FRI909] gi|329727986|gb|EGG64433.1| recombination protein RecR [Staphylococcus epidermidis VCU144] gi|329734389|gb|EGG70703.1| recombination protein RecR [Staphylococcus epidermidis VCU028] gi|329736120|gb|EGG72393.1| recombination protein RecR [Staphylococcus epidermidis VCU045] Length = 198 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 131/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVKFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPALVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|21222034|ref|NP_627813.1| recombination protein RecR [Streptomyces coelicolor A3(2)] gi|256786880|ref|ZP_05525311.1| recombination protein RecR [Streptomyces lividans TK24] gi|289770774|ref|ZP_06530152.1| recombination protein RecR [Streptomyces lividans TK24] gi|6685844|sp|Q9XAI4|RECR_STRCO RecName: Full=Recombination protein recR gi|5748805|gb|AAD34032.2|AF151381_2 recombination protein RecR [Streptomyces coelicolor A3(2)] gi|5123893|emb|CAB45485.1| putative recomination protein [Streptomyces coelicolor A3(2)] gi|289700973|gb|EFD68402.1| recombination protein RecR [Streptomyces lividans TK24] Length = 199 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C+ CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPVDVRRLAQALMEVKAKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D Sbjct: 61 NVAQEEQCNICRDTRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|307942777|ref|ZP_07658122.1| recombination protein RecR [Roseibium sp. TrichSKD4] gi|307773573|gb|EFO32789.1| recombination protein RecR [Roseibium sp. TrichSKD4] Length = 202 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 125/201 (62%), Positives = 164/201 (81%), Gaps = 1/201 (0%) Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M +K + G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PLAEAM +K+ + Sbjct: 1 MAQKRVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLAEAMGIAVDKIGI 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS CG VDT+DPCAIC D +RD +++VVEDVADLWALER+ A+NA YHVLGG+LSPLD Sbjct: 61 CSKCGTVDTSDPCAICSDPRRDPKLLVVVEDVADLWALERAGAINACYHVLGGTLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGPED+ + SL+ R E ++ E+I AI+AT+EGQTTAHY+MD+L + V +TRLA+G+P+ Sbjct: 121 IGPEDLNLASLVTRCEDPELEEVILAINATVEGQTTAHYVMDQLAHLSVNVTRLAHGVPV 180 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 G ELDYLD+GT+ +A+R+RT Sbjct: 181 GGELDYLDEGTLAQALRARTQ 201 >gi|163757649|ref|ZP_02164738.1| DNA recombination protein [Hoeflea phototrophica DFL-43] gi|162285151|gb|EDQ35433.1| DNA recombination protein [Hoeflea phototrophica DFL-43] Length = 201 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 128/199 (64%), Positives = 165/199 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQK++TG EIE LI++LAR+PG GPRSARRA LHL+KKK+QL+GPLA AM ++KV +C Sbjct: 1 MQKRVTGPEIERLIQLLARVPGLGPRSARRAALHLIKKKDQLMGPLALAMNEAHDKVQIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGN DT DPC +C D RD SVIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD + Sbjct: 61 STCGNADTVDPCTVCTDPARDQSVIIVVEDVADLWALERAAAMNAGYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I L++R+ +RE++ A++AT+EGQTTAHYI ++L G D+K+TRLA+G+P+G Sbjct: 121 GPDDLSIAGLVDRVARGGVREILIAVNATVEGQTTAHYITEQLSGFDLKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIR+RT Sbjct: 181 GELDYLDEGTLAAAIRART 199 >gi|70727531|ref|YP_254447.1| recombination protein RecR [Staphylococcus haemolyticus JCSC1435] gi|123659170|sp|Q4L3D6|RECR_STAHJ RecName: Full=Recombination protein recR gi|68448257|dbj|BAE05841.1| recombination protein [Staphylococcus haemolyticus JCSC1435] Length = 198 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|253577377|ref|ZP_04854694.1| recombination protein RecR [Paenibacillus sp. oral taxon 786 str. D14] gi|251843277|gb|EES71308.1| recombination protein RecR [Paenibacillus sp. oral taxon 786 str. D14] Length = 202 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 131/202 (64%), Gaps = 3/202 (1%) Query: 1 MQKK---ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57 M++K + I LI +PG GP++A R H++ KE + A+A+ ++ + Sbjct: 1 MKEKAPLYYPEPIAKLIDAFTHLPGIGPKTAARLAFHVLNMKEDDVIDFAKALVSVKRNL 60 Query: 58 CLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117 CSIC N+ TDPC IC D+ RDASVI VV++ DL A+ER+K + YHVL G++SP+ Sbjct: 61 HYCSICCNITDTDPCRICQDKTRDASVICVVQESKDLVAMERTKEFDGYYHVLQGAISPM 120 Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 + +GP+DI ++ L+ R+ ++++ELI A + IEG+ TA YI +K D+++TR+A+G+ Sbjct: 121 EGLGPDDIRLKELLNRLSDERVKELILATNPNIEGEATAMYISRLVKPFDIRVTRIAHGL 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 P+G +L+Y D+ T+ +A+ R Sbjct: 181 PVGGDLEYADEVTLSKALEGRR 202 >gi|157691311|ref|YP_001485773.1| recombination protein RecR [Bacillus pumilus SAFR-032] gi|194018063|ref|ZP_03056668.1| recombination protein RecR [Bacillus pumilus ATCC 7061] gi|166918736|sp|A8FAE6|RECR_BACP2 RecName: Full=Recombination protein recR gi|157680069|gb|ABV61213.1| recombination protein RecR [Bacillus pumilus SAFR-032] gi|194010255|gb|EDW19832.1| recombination protein RecR [Bacillus pumilus ATCC 7061] Length = 198 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ +E ++ A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMQEDVVLDFAKALVNAKRNLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDTRRDQSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++ E+I A + IEG+ TA YI LK +K++R+A+G+P+G +L+Y Sbjct: 123 KIPDLLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEVTLSKALEGRREM 198 >gi|240849895|ref|YP_002971284.1| recombination protein RecR [Bartonella grahamii as4aup] gi|240267018|gb|ACS50606.1| recombination protein RecR [Bartonella grahamii as4aup] Length = 201 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 127/201 (63%), Positives = 157/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI+IL+RIPG GPRSARRA LHL+KKKE LL PL A+ KV +C Sbjct: 1 MSKYIAGPEIERLIQILSRIPGLGPRSARRAALHLIKKKETLLEPLGAAIQAAIEKVGIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDT DPC+IC D +RD + IIVVED+ADLWALER+K + A YHVLGG LSPLD I Sbjct: 61 SVCGNVDTIDPCSICTDLRRDDTTIIVVEDIADLWALERAKTLAARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I +LI+R+ I E+I A++AT+EGQTTAHYI D+L VKITRLA+G+P+G Sbjct: 121 GPDELNIATLIQRVVQNPITEIILAVNATVEGQTTAHYITDQLSNFSVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+++RT L Sbjct: 181 GELDYLDDGTLAAAVQARTNL 201 >gi|289435977|ref|YP_003465849.1| Recombination protein recR [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172221|emb|CBH28767.1| Recombination protein recR [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 198 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 123/195 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG GP+SA R +++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC+D RD S+I VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDKDPCYICVDTSRDRSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I E+I A + +EG+ TA YI LK +KITR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKAMEGRRE 197 >gi|18309029|ref|NP_560963.1| recombination protein RecR [Clostridium perfringens str. 13] gi|110801227|ref|YP_694520.1| recombination protein RecR [Clostridium perfringens ATCC 13124] gi|110802201|ref|YP_697399.1| recombination protein RecR [Clostridium perfringens SM101] gi|168206161|ref|ZP_02632166.1| recombination protein RecR [Clostridium perfringens E str. JGS1987] gi|168210524|ref|ZP_02636149.1| recombination protein RecR [Clostridium perfringens B str. ATCC 3626] gi|168213990|ref|ZP_02639615.1| recombination protein RecR [Clostridium perfringens CPE str. F4969] gi|168217759|ref|ZP_02643384.1| recombination protein RecR [Clostridium perfringens NCTC 8239] gi|169343382|ref|ZP_02864386.1| recombination protein RecR [Clostridium perfringens C str. JGS1495] gi|182625381|ref|ZP_02953154.1| recombination protein RecR [Clostridium perfringens D str. JGS1721] gi|20139456|sp|Q8XPB8|RECR_CLOPE RecName: Full=Recombination protein recR gi|122959143|sp|Q0TV20|RECR_CLOP1 RecName: Full=Recombination protein recR gi|123047626|sp|Q0SWS6|RECR_CLOPS RecName: Full=Recombination protein recR gi|18143704|dbj|BAB79753.1| DNA repair and genetic recombination protein [Clostridium perfringens str. 13] gi|110675874|gb|ABG84861.1| recombination protein RecR [Clostridium perfringens ATCC 13124] gi|110682702|gb|ABG86072.1| recombination protein RecR [Clostridium perfringens SM101] gi|169298468|gb|EDS80554.1| recombination protein RecR [Clostridium perfringens C str. JGS1495] gi|170662331|gb|EDT15014.1| recombination protein RecR [Clostridium perfringens E str. JGS1987] gi|170711405|gb|EDT23587.1| recombination protein RecR [Clostridium perfringens B str. ATCC 3626] gi|170714502|gb|EDT26684.1| recombination protein RecR [Clostridium perfringens CPE str. F4969] gi|177909378|gb|EDT71830.1| recombination protein RecR [Clostridium perfringens D str. JGS1721] gi|182380222|gb|EDT77701.1| recombination protein RecR [Clostridium perfringens NCTC 8239] Length = 198 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++P G +SA+R TLH++ + + A A+ + CS+ Sbjct: 1 MEFYPVAIEKLIEEFAKLPSIGKKSAQRLTLHILNLPKDEVEEFANALVKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN TDPCAIC + R+ +I VVE D+ +E+ K N LYHVL G++SP+ GP Sbjct: 61 CGNFTDTDPCAICSNPNREKDIICVVEQPKDIMTMEKVKEFNGLYHVLHGTISPMQGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R ++E+I A + TIEG+ TA YI LK +DVK+TR+A GIP+G + Sbjct: 121 QDIRIRELVAR-MSGDVKEVIVATNPTIEGEATAMYISKILKPLDVKVTRIAAGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ RTV+ Sbjct: 180 LEYADEVTLSKALEGRTVI 198 >gi|188588858|ref|YP_001922589.1| recombination protein RecR [Clostridium botulinum E3 str. Alaska E43] gi|251781258|ref|ZP_04824174.1| recombination protein RecR [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|229890143|sp|B2V0W0|RECR_CLOBA RecName: Full=Recombination protein recR gi|188499139|gb|ACD52275.1| recombination protein RecR [Clostridium botulinum E3 str. Alaska E43] gi|243081705|gb|EES47766.1| recombination protein RecR [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 198 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++P G ++A+R TLH++ + + A+A+ + CS Sbjct: 1 MEFYPVAIEKLIEEFAKLPSIGKKTAQRLTLHILNLPDDEVREFAKALVKAKGTIKYCST 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN TDPCA+C + RD S I VVE D+ +E+ K N LYHVL G++SP+ GP Sbjct: 61 CGNFTDTDPCALCSNPNRDKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R ++++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G + Sbjct: 121 QDIKIRELVAR-MNEEVKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLSKALEGRKEI 198 >gi|184199928|ref|YP_001854135.1| recombination protein RecR [Kocuria rhizophila DC2201] gi|183580158|dbj|BAG28629.1| recombination protein RecR [Kocuria rhizophila DC2201] Length = 201 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 125/195 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + + L +A++ + V C ICG Sbjct: 1 MYEGPVQDLIDELGRLPGVGPKSAQRIAFHLLDADKDEVQQLVDAISTVKTSVSFCVICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + CAIC D +RD SVI VVE+ D+ A+ER+++ LYHVLGG++SPL +GP+ Sbjct: 61 NVTEQEECAICRDARRDRSVICVVEESKDVMAIERTRSYRGLYHVLGGAISPLQGVGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ++E++ A +EG+ TA Y+ LK + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELMTRLSDETVQEIVLATDPNLEGEATATYLSRLLKTLGIRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A RT Sbjct: 181 YADEVTLGRAFEGRT 195 >gi|152964435|ref|YP_001360219.1| recombination protein RecR [Kineococcus radiotolerans SRS30216] gi|151358952|gb|ABS01955.1| recombination protein RecR [Kineococcus radiotolerans SRS30216] Length = 199 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + LA+ + + +KV C +CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLAADAVDVKRLADVLTEVKSKVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C +C D +RDASVI VVE+ D+ A+ER++ YHVLGG++SP++ IGP+D Sbjct: 61 NVAQERLCRVCRDPRRDASVICVVEESKDVVAIERTREFRGRYHVLGGAISPMEGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ ++ E I A +EG+ TA Y+ LK + +++TRLA G+P+G +L+ Sbjct: 121 LRMRELLARLSDGQVTEAIIATDPNLEGEATATYLARLLKPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 181 YADEVTLGRAFAGRRSL 197 >gi|260905314|ref|ZP_05913636.1| recombination protein RecR [Brevibacterium linens BL2] Length = 201 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 123/200 (61%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +++L++ ++PG GP+SA+R H+++ + + LA+A+ + +V C Sbjct: 1 MSAVYEGALQDLVEEFGKLPGIGPKSAQRLAFHILQSESADVSSLAQALTEVKKRVRFCD 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGNV C +C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++ P+ +G Sbjct: 61 ICGNVSEEAECTVCQDPRRDRSMICVVEEPKDVVAIERTREYRGLYHVLGGAIDPMAGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+++ I+ L+ R++ +++E + A +EG+ TA Y++ L + V +TRLA G+P+G Sbjct: 121 PDNLRIKELMPRLQNGEVKECVIATDPNLEGEATATYLVRLLNSLGVTVTRLASGLPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A R + Sbjct: 181 DLEYADEVTLGRAFSGRREM 200 >gi|330684677|gb|EGG96379.1| recombination protein RecR [Staphylococcus epidermidis VCU121] Length = 198 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 131/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITEKDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREFKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPALVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|220932909|ref|YP_002509817.1| recombination protein RecR [Halothermothrix orenii H 168] gi|254790771|sp|B8CZX0|RECR_HALOH RecName: Full=Recombination protein recR gi|219994219|gb|ACL70822.1| recombination protein RecR [Halothermothrix orenii H 168] Length = 198 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI L+R+PG GP++A+R ++++ + L+++M + K CS+ Sbjct: 1 MRYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC C +RD ++I VVE D+ A+ER+ LYHVL GS+SP+D IGP Sbjct: 61 CNNLTEKDPCDFCSSPERDHNLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I++L+ R+ + ++E+I A EG TA Y+ +K + VK+TR+A+G+P+G + Sbjct: 121 EDIKIRNLLPRL-KEGVKEVIVATDPNAEGDATAMYLARLIKPLGVKVTRIAHGLPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLSKALEGRREM 198 >gi|225181515|ref|ZP_03734957.1| recombination protein RecR [Dethiobacter alkaliphilus AHT 1] gi|225167763|gb|EEG76572.1| recombination protein RecR [Dethiobacter alkaliphilus AHT 1] Length = 198 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 126/195 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I + I LI+ L ++PG GP++A+R L L+ + +A +M + +K C ICG Sbjct: 2 IYPEPISRLIESLQKLPGVGPKTAQRFALFLLSLPRDQVVAIARSMVDARDKTRYCRICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N + C +C D++RD +VI VV+D D+ A+ER++ LYHVLGG++SP+D IGPE Sbjct: 62 NFSDDETCTVCRDKRRDNTVICVVQDSRDVLAMERTREYKGLYHVLGGAISPMDGIGPEQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ERI+ + RE+I A + +EG+ TA Y+ LK + +K+TR+A+G+P+G +L+ Sbjct: 122 LRMRELLERIKKGRAREVILATNPNVEGEATALYVARVLKPLGLKVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A+ R Sbjct: 182 YADEVTLSRALEGRR 196 >gi|304407304|ref|ZP_07388957.1| recombination protein RecR [Paenibacillus curdlanolyticus YK9] gi|304343745|gb|EFM09586.1| recombination protein RecR [Paenibacillus curdlanolyticus YK9] Length = 199 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI R+PG GP++A R H+++ +E + A+A+ ++ + CS+C Sbjct: 2 YYPEPIAKLIDAFTRLPGIGPKTAARLAFHVLRMQEDDVIDFAKALVSVKRNLHYCSVCC 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD +VI VV++ DL A+ER+K + YHVL G++SP++ IGP+ Sbjct: 62 NITDVDPCRICQDKNRDHAVICVVQESKDLVAMERTKEFSGYYHVLQGAISPMEGIGPDQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I + L++R+ ++++ELI A + IEG+ TA Y+ +K +++TR+A+G+P+G +L+ Sbjct: 122 IRVAELLQRLSDERVQELIMATNPNIEGEATAMYLSRLVKPFGIRVTRIAHGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ R L Sbjct: 182 YADEVTLSKALEGRREL 198 >gi|187935036|ref|YP_001887619.1| recombination protein RecR [Clostridium botulinum B str. Eklund 17B] gi|229890144|sp|B2TR53|RECR_CLOBB RecName: Full=Recombination protein recR gi|187723189|gb|ACD24410.1| recombination protein RecR [Clostridium botulinum B str. Eklund 17B] Length = 198 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++P G ++A+R LH++ + A A+ + CS Sbjct: 1 MEFYPVAIEKLIEEFAKLPSIGKKTAQRLALHILNLPNDEVREFATALVKARGTIKYCST 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN TDPCA+C + RD S I VVE D+ +E+ K N LYHVL G++SP+ GP Sbjct: 61 CGNFTDTDPCALCSNPNRDKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R ++ +E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G + Sbjct: 121 QDIKIRELVAR-MNEEAKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLSKALEGRKEI 198 >gi|160933399|ref|ZP_02080787.1| hypothetical protein CLOLEP_02244 [Clostridium leptum DSM 753] gi|156867276|gb|EDO60648.1| hypothetical protein CLOLEP_02244 [Clostridium leptum DSM 753] Length = 200 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 120/192 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L++ R+PG G ++A+R H+++ ++ A+A+ + + K+ CS+C N+ Sbjct: 8 PLSRLVEQFERLPGIGRKTAQRLAYHVLQLPKKEAENFAQAILDAHEKIHYCSVCCNLTD 67 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C++C ++ R+ VI VVED D+ A ER+ + YHVL G +SPL IGP+ + I+ Sbjct: 68 QELCSVCRNEAREKGVICVVEDPRDVAAFERTHEYSGAYHVLHGVISPLGGIGPDQLKIK 127 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++R+ ++E+I A + T+EG+ TA Y+ LK + +K+TRLAYGIP+G +L+Y D+ Sbjct: 128 ELLDRVNRGGVKEVIMATNPTVEGEATAMYLSRLLKPLGIKVTRLAYGIPVGGDLEYADE 187 Query: 189 GTIFEAIRSRTV 200 T+ A+ R Sbjct: 188 VTLSRALAGRQE 199 >gi|21282164|ref|NP_645252.1| recombination protein RecR [Staphylococcus aureus subsp. aureus MW2] gi|49485344|ref|YP_042565.1| recombination protein RecR [Staphylococcus aureus subsp. aureus MSSA476] gi|57651361|ref|YP_185410.1| recombination protein RecR [Staphylococcus aureus subsp. aureus COL] gi|82750187|ref|YP_415928.1| recombination protein RecR [Staphylococcus aureus RF122] gi|87159968|ref|YP_493166.1| recombination protein RecR [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194235|ref|YP_499027.1| recombination protein RecR [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220656|ref|YP_001331478.1| recombination protein RecR [Staphylococcus aureus subsp. aureus str. Newman] gi|161508725|ref|YP_001574384.1| recombination protein RecR [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142545|ref|ZP_03567038.1| recombination protein RecR [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253730828|ref|ZP_04864993.1| recombination protein RecR [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253735212|ref|ZP_04869377.1| recombination protein RecR [Staphylococcus aureus subsp. aureus TCH130] gi|257424590|ref|ZP_05601019.1| recombination protein recR [Staphylococcus aureus subsp. aureus 55/2053] gi|257427256|ref|ZP_05603658.1| recombination protein recR [Staphylococcus aureus subsp. aureus 65-1322] gi|257429892|ref|ZP_05606279.1| recombination protein recR [Staphylococcus aureus subsp. aureus 68-397] gi|257432595|ref|ZP_05608958.1| recombination protein recR [Staphylococcus aureus subsp. aureus E1410] gi|257435500|ref|ZP_05611551.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M876] gi|258424487|ref|ZP_05687364.1| recombination protein RecR [Staphylococcus aureus A9635] gi|258452486|ref|ZP_05700494.1| recombination protein recR [Staphylococcus aureus A5948] gi|262049734|ref|ZP_06022600.1| recombination protein RecR [Staphylococcus aureus D30] gi|262051992|ref|ZP_06024204.1| recombination protein RecR [Staphylococcus aureus 930918-3] gi|282912685|ref|ZP_06320481.1| recombination protein RecR [Staphylococcus aureus subsp. aureus WBG10049] gi|282913305|ref|ZP_06321097.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M899] gi|282915796|ref|ZP_06323565.1| recombination protein RecR [Staphylococcus aureus subsp. aureus D139] gi|282918259|ref|ZP_06326000.1| recombination protein RecR [Staphylococcus aureus subsp. aureus C427] gi|282922933|ref|ZP_06330623.1| recombination protein RecR [Staphylococcus aureus subsp. aureus C101] gi|282924530|ref|ZP_06332200.1| recombination protein RecR [Staphylococcus aureus A9765] gi|283768196|ref|ZP_06341110.1| recombination protein recR [Staphylococcus aureus subsp. aureus H19] gi|284023489|ref|ZP_06377887.1| recombination protein RecR [Staphylococcus aureus subsp. aureus 132] gi|293498352|ref|ZP_06666206.1| recombination protein RecR [Staphylococcus aureus subsp. aureus 58-424] gi|293509293|ref|ZP_06668010.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M809] gi|293550560|ref|ZP_06673232.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M1015] gi|294850660|ref|ZP_06791383.1| recombination protein RecR [Staphylococcus aureus A9754] gi|297209023|ref|ZP_06925423.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911026|ref|ZP_07128475.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH70] gi|304380494|ref|ZP_07363172.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|24212225|sp|Q8NY07|RECR_STAAW RecName: Full=Recombination protein recR gi|56749540|sp|Q6GC08|RECR_STAAS RecName: Full=Recombination protein recR gi|71152039|sp|Q5HIJ7|RECR_STAAC RecName: Full=Recombination protein recR gi|122540160|sp|Q2G0T3|RECR_STAA8 RecName: Full=Recombination protein recR gi|123487161|sp|Q2FJG2|RECR_STAA3 RecName: Full=Recombination protein recR gi|123548602|sp|Q2YVW5|RECR_STAAB RecName: Full=Recombination protein recR gi|172048764|sp|A6QED4|RECR_STAAE RecName: Full=Recombination protein recR gi|189029379|sp|A8Z0X4|RECR_STAAT RecName: Full=Recombination protein recR gi|21203600|dbj|BAB94300.1| recombination protein [Staphylococcus aureus subsp. aureus MW2] gi|49243787|emb|CAG42212.1| putative recombination protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285547|gb|AAW37641.1| recombination protein RecR [Staphylococcus aureus subsp. aureus COL] gi|82655718|emb|CAI80117.1| recombination protein [Staphylococcus aureus RF122] gi|87125942|gb|ABD20456.1| recombination protein RecR [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201793|gb|ABD29603.1| recombination protein RecR [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373456|dbj|BAF66716.1| recombination protein RecR [Staphylococcus aureus subsp. aureus str. Newman] gi|160367534|gb|ABX28505.1| recombination protein RecR [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725440|gb|EES94169.1| recombination protein RecR [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726876|gb|EES95605.1| recombination protein RecR [Staphylococcus aureus subsp. aureus TCH130] gi|257273608|gb|EEV05710.1| recombination protein recR [Staphylococcus aureus subsp. aureus 55/2053] gi|257276887|gb|EEV08338.1| recombination protein recR [Staphylococcus aureus subsp. aureus 65-1322] gi|257280373|gb|EEV10960.1| recombination protein recR [Staphylococcus aureus subsp. aureus 68-397] gi|257283474|gb|EEV13606.1| recombination protein recR [Staphylococcus aureus subsp. aureus E1410] gi|257286096|gb|EEV16212.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M876] gi|257845082|gb|EEV69119.1| recombination protein RecR [Staphylococcus aureus A9635] gi|257859886|gb|EEV82726.1| recombination protein recR [Staphylococcus aureus A5948] gi|259160121|gb|EEW45153.1| recombination protein RecR [Staphylococcus aureus 930918-3] gi|259162196|gb|EEW46772.1| recombination protein RecR [Staphylococcus aureus D30] gi|269940051|emb|CBI48427.1| putative recombination protein [Staphylococcus aureus subsp. aureus TW20] gi|282315154|gb|EFB45540.1| recombination protein RecR [Staphylococcus aureus subsp. aureus C101] gi|282317956|gb|EFB48324.1| recombination protein RecR [Staphylococcus aureus subsp. aureus C427] gi|282320334|gb|EFB50675.1| recombination protein RecR [Staphylococcus aureus subsp. aureus D139] gi|282323405|gb|EFB53724.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M899] gi|282324381|gb|EFB54697.1| recombination protein RecR [Staphylococcus aureus subsp. aureus WBG10049] gi|282592839|gb|EFB97844.1| recombination protein RecR [Staphylococcus aureus A9765] gi|283461141|gb|EFC08226.1| recombination protein recR [Staphylococcus aureus subsp. aureus H19] gi|283469772|emb|CAQ48983.1| recombination protein RecR [Staphylococcus aureus subsp. aureus ST398] gi|290919607|gb|EFD96683.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M1015] gi|291097283|gb|EFE27541.1| recombination protein RecR [Staphylococcus aureus subsp. aureus 58-424] gi|291467932|gb|EFF10441.1| recombination protein RecR [Staphylococcus aureus subsp. aureus M809] gi|294822497|gb|EFG38943.1| recombination protein RecR [Staphylococcus aureus A9754] gi|296886294|gb|EFH25227.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298693809|gb|ADI97031.1| recombination protein RecR [Staphylococcus aureus subsp. aureus ED133] gi|300887205|gb|EFK82401.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH70] gi|302332193|gb|ADL22386.1| putative recombination protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302750370|gb|ADL64547.1| putative recombination protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341012|gb|EFM06934.1| recombination protein R [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436433|gb|ADQ75504.1| recombination protein R [Staphylococcus aureus subsp. aureus TCH60] gi|315196726|gb|EFU27072.1| recombination protein RecR [Staphylococcus aureus subsp. aureus CGS01] gi|320139231|gb|EFW31110.1| recombination protein RecR [Staphylococcus aureus subsp. aureus MRSA131] gi|320142045|gb|EFW33870.1| recombination protein RecR [Staphylococcus aureus subsp. aureus MRSA177] gi|323438497|gb|EGA96248.1| recombination protein RecR [Staphylococcus aureus O11] gi|323441333|gb|EGA98996.1| recombination protein RecR [Staphylococcus aureus O46] gi|329313198|gb|AEB87611.1| Recombination protein recR [Staphylococcus aureus subsp. aureus T0131] gi|329725116|gb|EGG61609.1| recombination protein RecR [Staphylococcus aureus subsp. aureus 21189] Length = 198 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 86/196 (43%), Positives = 130/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|182418718|ref|ZP_02949991.1| recombination protein RecR [Clostridium butyricum 5521] gi|237669751|ref|ZP_04529728.1| recombination protein RecR [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377412|gb|EDT74968.1| recombination protein RecR [Clostridium butyricum 5521] gi|237654825|gb|EEP52388.1| recombination protein RecR [Clostridium butyricum E4 str. BoNT E BL5262] Length = 198 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE LI+ A++P G ++A+R TLH++ E + A A+ + CSI Sbjct: 1 MEFYPVAIEKLIEEFAKLPSIGKKTAQRLTLHVLNLPEDEVREFANALVKARGTIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPC++C + RD +I VVE D+ +E+ K N +YHVL G++SP+ GP Sbjct: 61 CGNFTDSDPCSLCSNPNRDKGMICVVEQPKDIMTMEKVKEYNGVYHVLHGNISPMQGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ R ++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G + Sbjct: 121 QDIRIRELVAR-MSADVKEVILATNPNIEGEATAMYISKVLKPLDVKVTRIAAGIPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLSKALEGRKEI 198 >gi|332800255|ref|YP_004461754.1| Recombination protein recR [Tepidanaerobacter sp. Re1] gi|332697990|gb|AEE92447.1| Recombination protein recR [Tepidanaerobacter sp. Re1] Length = 198 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 129/199 (64%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + ++ LI L+R+PG GP++A+R +++K + + LA+A+ + CSI Sbjct: 1 MAYYAEPLDRLIGELSRLPGIGPKTAQRLAFYILKMSKDRVESLADAILQAKELITYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPC+IC RD + I+VVED D+ A+E+++ LYHVL G++SPL+ IGP Sbjct: 61 CGNFTDVDPCSICQTPYRDKNTIMVVEDPKDIVAMEKTRDYKGLYHVLHGAISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI I+ L+ RI +I+E+I A + +EG+ TA Y+ LK +DVK+TR+AYGIPMG + Sbjct: 121 DDIKIKELLARI-TPEIKEIILATNPNVEGEATAMYLAKLLKPLDVKVTRIAYGIPMGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 180 LEYADEVTLTKALEGRQKI 198 >gi|297563730|ref|YP_003682704.1| recombination protein RecR [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848178|gb|ADH70198.1| recombination protein RecR [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 199 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R HL+ + + L A+ + KV CS+CG Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHLLSAEHADVKRLVSALVEVKEKVRFCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV D C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEEDQCRICRDVRRDPAIICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIKELMTRLADGQVTELILATDPNLEGEATATYLARLVKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 181 YADEVTLGRAFEGRRSL 197 >gi|150019757|ref|YP_001312011.1| recombination protein RecR [Clostridium beijerinckii NCIMB 8052] gi|149906222|gb|ABR37055.1| recombination protein RecR [Clostridium beijerinckii NCIMB 8052] Length = 199 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + IE LI+ A++P G ++A+R TLH++ + + A+A+ V CS Sbjct: 1 MMEFYPVAIEKLIEEFAKLPSIGQKTAQRLTLHILNLPDDEVKEFADALVKAKGTVKYCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +CGN DPCA+C + RD I VVE D+ +E+ K N +YHVL G++SP+ G Sbjct: 61 VCGNFTDKDPCALCGNPNRDKGTICVVEQPKDIMTMEKVKEYNGVYHVLHGNISPMQGRG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+DI I+ L+ R + ++E+I A + IEG+ TA YI LK +DVK+TR+A GIP+G Sbjct: 121 PQDIRIRELVSR-MNEDVKEVILATNPNIEGEATAMYISKILKPLDVKVTRIASGIPVGG 179 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +LDY D+ T+ +A+ R + Sbjct: 180 DLDYADEVTLSKALEGRKEI 199 >gi|15923470|ref|NP_371004.1| recombination protein RecR [Staphylococcus aureus subsp. aureus Mu50] gi|156978808|ref|YP_001441067.1| recombination protein RecR [Staphylococcus aureus subsp. aureus Mu3] gi|255005273|ref|ZP_05143874.2| recombination protein RecR [Staphylococcus aureus subsp. aureus Mu50-omega] gi|20139575|sp|Q932G3|RECR_STAAM RecName: Full=Recombination protein recR gi|166221970|sp|A7WYM0|RECR_STAA1 RecName: Full=Recombination protein recR gi|14246248|dbj|BAB56642.1| recombination protein [Staphylococcus aureus subsp. aureus Mu50] gi|156720943|dbj|BAF77360.1| recombination protein [Staphylococcus aureus subsp. aureus Mu3] Length = 198 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 86/196 (43%), Positives = 130/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPSLIERLKSDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAITGRTEM 198 >gi|15926157|ref|NP_373690.1| recombination protein RecR [Staphylococcus aureus subsp. aureus N315] gi|148266938|ref|YP_001245881.1| recombination protein RecR [Staphylococcus aureus subsp. aureus JH9] gi|150392984|ref|YP_001315659.1| recombination protein RecR [Staphylococcus aureus subsp. aureus JH1] gi|253315724|ref|ZP_04838937.1| recombination protein RecR [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|257795399|ref|ZP_05644378.1| recombination protein RecR [Staphylococcus aureus A9781] gi|258413425|ref|ZP_05681700.1| recombination protein RecR [Staphylococcus aureus A9763] gi|258421453|ref|ZP_05684380.1| recombination protein RecR [Staphylococcus aureus A9719] gi|258436848|ref|ZP_05689188.1| recombination protein recR [Staphylococcus aureus A9299] gi|258444433|ref|ZP_05692767.1| recombination protein recR [Staphylococcus aureus A8115] gi|258445645|ref|ZP_05693825.1| recombination protein recR [Staphylococcus aureus A6300] gi|258448177|ref|ZP_05696306.1| recombination protein recR [Staphylococcus aureus A6224] gi|258456011|ref|ZP_05703966.1| recombination protein recR [Staphylococcus aureus A5937] gi|269202099|ref|YP_003281368.1| recombination protein RecR [Staphylococcus aureus subsp. aureus ED98] gi|282893619|ref|ZP_06301852.1| recombination protein RecR [Staphylococcus aureus A8117] gi|282927513|ref|ZP_06335131.1| recombination protein RecR [Staphylococcus aureus A10102] gi|295405728|ref|ZP_06815538.1| recombination protein RecR [Staphylococcus aureus A8819] gi|296276915|ref|ZP_06859422.1| recombination protein RecR [Staphylococcus aureus subsp. aureus MR1] gi|297245637|ref|ZP_06929505.1| recombination protein RecR [Staphylococcus aureus A8796] gi|20139661|sp|Q99WC3|RECR_STAAN RecName: Full=Recombination protein recR gi|189029377|sp|A6TYV4|RECR_STAA2 RecName: Full=Recombination protein recR gi|189029378|sp|A5IQ32|RECR_STAA9 RecName: Full=Recombination protein recR gi|13700370|dbj|BAB41668.1| recombination protein [Staphylococcus aureus subsp. aureus N315] gi|147740007|gb|ABQ48305.1| DNA replication and repair protein RecR [Staphylococcus aureus subsp. aureus JH9] gi|149945436|gb|ABR51372.1| recombination protein RecR [Staphylococcus aureus subsp. aureus JH1] gi|257789371|gb|EEV27711.1| recombination protein RecR [Staphylococcus aureus A9781] gi|257839672|gb|EEV64141.1| recombination protein RecR [Staphylococcus aureus A9763] gi|257842877|gb|EEV67299.1| recombination protein RecR [Staphylococcus aureus A9719] gi|257848639|gb|EEV72626.1| recombination protein recR [Staphylococcus aureus A9299] gi|257850692|gb|EEV74640.1| recombination protein recR [Staphylococcus aureus A8115] gi|257855595|gb|EEV78530.1| recombination protein recR [Staphylococcus aureus A6300] gi|257858692|gb|EEV81566.1| recombination protein recR [Staphylococcus aureus A6224] gi|257862223|gb|EEV84996.1| recombination protein recR [Staphylococcus aureus A5937] gi|262074389|gb|ACY10362.1| recombination protein RecR [Staphylococcus aureus subsp. aureus ED98] gi|282590837|gb|EFB95913.1| recombination protein RecR [Staphylococcus aureus A10102] gi|282764305|gb|EFC04432.1| recombination protein RecR [Staphylococcus aureus A8117] gi|285816179|gb|ADC36666.1| Recombination protein RecR [Staphylococcus aureus 04-02981] gi|294969803|gb|EFG45822.1| recombination protein RecR [Staphylococcus aureus A8819] gi|297177623|gb|EFH36874.1| recombination protein RecR [Staphylococcus aureus A8796] gi|312828975|emb|CBX33817.1| recombination protein RecR [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130110|gb|EFT86099.1| recombination protein RecR [Staphylococcus aureus subsp. aureus CGS03] gi|329725651|gb|EGG62130.1| recombination protein RecR [Staphylococcus aureus subsp. aureus 21172] gi|329730673|gb|EGG67054.1| recombination protein RecR [Staphylococcus aureus subsp. aureus 21193] Length = 198 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 86/196 (43%), Positives = 130/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPSLIERLKSDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|306821329|ref|ZP_07454938.1| recombination protein R [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550616|gb|EFM38598.1| recombination protein R [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 200 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K IENLI+ L+++PG G ++A+R H++ +++ L+ ++ K+ C Sbjct: 1 MSN--FSKPIENLIRQLSKLPGIGQKTAQRLAFHIINMEDEDAKALSSSILEAKEKIQFC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SIC N+ ++PC IC +R VI VVE ++ A+E+SK N YHVL G++SP + I Sbjct: 59 SICQNIADSNPCEICSSTERSGEVICVVESPREVIAMEKSKEFNGKYHVLHGTISPSNSI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P+ + I+ L+ER+ I+E+I A + TI+G+ TA YI LK +KITR+A G+PMG Sbjct: 119 TPDMLKIRELVERLASDDIKEVILATNPTIDGEATAMYIARLLKPFGIKITRIARGLPMG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ++++Y D+ TI +A+ +R + Sbjct: 179 ADIEYADEVTITKALENRVEI 199 >gi|73663585|ref|YP_302366.1| recombination protein RecR [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123641631|sp|Q49UY9|RECR_STAS1 RecName: Full=Recombination protein recR gi|72496100|dbj|BAE19421.1| recombinational DNA repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 198 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 130/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H++ KE + A+A+ ++ ++ CS CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFAKALVDVKRELTYCSECGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITEQDPCYICQDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI R++ ++++ELI A++ +EG++TA YI +K I + +TRLA G+ +G +L+Y Sbjct: 123 NIPSLINRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGITVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIMGRTEM 198 >gi|319403644|emb|CBI77229.1| recombination protein RecR [Bartonella rochalimae ATCC BAA-1498] Length = 201 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 126/199 (63%), Positives = 159/199 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE+LI++LARIPG GPRSARRA L+L+KKKE LL PL A+ NKV +C Sbjct: 1 MSKHIAGPEIEHLIQLLARIPGLGPRSARRAALYLIKKKETLLEPLGSAIQETANKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDTT+PC+IC D RD S+IIVVED++DLWALER+K ++A YHVLGG LSPLD I Sbjct: 61 SVCGNVDTTNPCSICTDPHRDESIIIVVEDISDLWALERAKFLSARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G Sbjct: 121 GPDELNIASLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGT+ A+++RT Sbjct: 181 GELDYLDDGTLAAALQART 199 >gi|319655050|ref|ZP_08009120.1| recombination protein RecR [Bacillus sp. 2_A_57_CT2] gi|317393274|gb|EFV74042.1| recombination protein RecR [Bacillus sp. 2_A_57_CT2] Length = 198 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 124/195 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLSYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC DQ+RD SVI VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDQRRDRSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++E+I A + IEG+ TA YI +K +K TR+A+G+P+G +L+Y Sbjct: 123 NIPDLLKRLQDETVQEIILATNPNIEGEATAMYISRLIKPSGIKATRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRRE 197 >gi|239929913|ref|ZP_04686866.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672] gi|291438248|ref|ZP_06577638.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672] gi|291341143|gb|EFE68099.1| recombination protein RecR [Streptomyces ghanaensis ATCC 14672] Length = 199 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALMEVKAKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C+IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D Sbjct: 61 NVAQEEQCSICRDARRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|56961821|ref|YP_173543.1| recombination protein RecR [Bacillus clausii KSM-K16] gi|73621463|sp|Q5WLZ3|RECR_BACSK RecName: Full=Recombination protein recR gi|56908055|dbj|BAD62582.1| recombinational DNA repair protein RecR [Bacillus clausii KSM-K16] Length = 199 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 82/197 (41%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ R+PG GP++A R H++ KE + A+A+ + + CS C N Sbjct: 3 YPRPIAKLIEGFTRLPGIGPKTASRLAFHVLDMKEDDVLEFAKALVHAKRDLTYCSQCHN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D+ RD + I VV++ DL A+E+ + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDTDPCQICEDKHRDRTTICVVQESRDLIAMEKMREYTGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I LI+R++ + +E+I A + TIEG+ TA YI +K +K+TRLA+G+P+G +L+ Sbjct: 123 KIAELIKRLQDDESVKEVIVATNPTIEGEATAMYISRLIKPTGIKVTRLAHGLPVGGDLE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +AI R L Sbjct: 183 YADEVTLSKAIEGRREL 199 >gi|302559463|ref|ZP_07311805.1| recombination protein RecR [Streptomyces griseoflavus Tu4000] gi|302477081|gb|EFL40174.1| recombination protein RecR [Streptomyces griseoflavus Tu4000] Length = 199 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALMEVKAKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D Sbjct: 61 NVAQEEQCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|148378040|ref|YP_001252581.1| recombination protein recR [Clostridium botulinum A str. ATCC 3502] gi|153932718|ref|YP_001382439.1| recombination protein RecR [Clostridium botulinum A str. ATCC 19397] gi|153937733|ref|YP_001385992.1| recombination protein RecR [Clostridium botulinum A str. Hall] gi|153938661|ref|YP_001389395.1| recombination protein RecR [Clostridium botulinum F str. Langeland] gi|168181145|ref|ZP_02615809.1| recombination protein recR [Clostridium botulinum NCTC 2916] gi|170756536|ref|YP_001779656.1| recombination protein RecR [Clostridium botulinum B1 str. Okra] gi|170758489|ref|YP_001785359.1| recombination protein RecR [Clostridium botulinum A3 str. Loch Maree] gi|226947246|ref|YP_002802337.1| recombination protein RecR [Clostridium botulinum A2 str. Kyoto] gi|237793344|ref|YP_002860896.1| recombination protein RecR [Clostridium botulinum Ba4 str. 657] gi|166221932|sp|A7FQ67|RECR_CLOB1 RecName: Full=Recombination protein recR gi|166221933|sp|A5HXS8|RECR_CLOBH RecName: Full=Recombination protein recR gi|166221934|sp|A7G9D5|RECR_CLOBL RecName: Full=Recombination protein recR gi|229890145|sp|B1IDW8|RECR_CLOBK RecName: Full=Recombination protein recR gi|229890146|sp|B1KRT7|RECR_CLOBM RecName: Full=Recombination protein recR gi|254790760|sp|C1FPJ6|RECR_CLOBJ RecName: Full=Recombination protein recR gi|259563688|sp|C3KXT0|RECR_CLOB6 RecName: Full=Recombination protein recR gi|148287524|emb|CAL81586.1| recombination protein [Clostridium botulinum A str. ATCC 3502] gi|152928762|gb|ABS34262.1| recombination protein RecR [Clostridium botulinum A str. ATCC 19397] gi|152933647|gb|ABS39146.1| recombination protein RecR [Clostridium botulinum A str. Hall] gi|152934557|gb|ABS40055.1| recombination protein RecR [Clostridium botulinum F str. Langeland] gi|169121748|gb|ACA45584.1| recombination protein RecR [Clostridium botulinum B1 str. Okra] gi|169405478|gb|ACA53889.1| recombination protein RecR [Clostridium botulinum A3 str. Loch Maree] gi|182668013|gb|EDT79992.1| recombination protein recR [Clostridium botulinum NCTC 2916] gi|226843381|gb|ACO86047.1| recombination protein RecR [Clostridium botulinum A2 str. Kyoto] gi|229261177|gb|ACQ52210.1| recombination protein RecR [Clostridium botulinum Ba4 str. 657] gi|295317503|gb|ADF97880.1| recombination protein RecR [Clostridium botulinum F str. 230613] Length = 198 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+ Sbjct: 1 MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GP Sbjct: 61 CGNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDIKLKELIRRI-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 180 LEYADEVTLAKALEGRIEL 198 >gi|239943047|ref|ZP_04694984.1| recombination protein RecR [Streptomyces roseosporus NRRL 15998] gi|239989505|ref|ZP_04710169.1| recombination protein RecR [Streptomyces roseosporus NRRL 11379] gi|291446523|ref|ZP_06585913.1| recombination protein recR [Streptomyces roseosporus NRRL 15998] gi|291349470|gb|EFE76374.1| recombination protein recR [Streptomyces roseosporus NRRL 15998] Length = 199 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C +CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQQERCGICRDARRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGSITELILATDPNLEGEATATYLARMVKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|72160448|ref|YP_288105.1| recombination protein RecR [Thermobifida fusca YX] gi|123747302|sp|Q47TY2|RECR_THEFY RecName: Full=Recombination protein recR gi|71914180|gb|AAZ54082.1| DNA replication and repair protein RecR [Thermobifida fusca YX] Length = 199 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R HL+ + + L A+ + +V C++CG Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHLLAAETADVHRLVNALVAVKERVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NIAEETQCRICRDPRRDDTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ ++ E+I A +EG+ TA Y+ LK + +K+TRLA G+P+G +L+ Sbjct: 121 LRVKELMARLSEGRVTEVILATDPNLEGEATATYLARLLKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 181 YADEVTLGRAFEGRRAL 197 >gi|255284260|ref|ZP_05348815.1| recombination protein RecR [Bryantella formatexigens DSM 14469] gi|255265213|gb|EET58418.1| recombination protein RecR [Bryantella formatexigens DSM 14469] Length = 198 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 124/199 (62%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + ++I LI+ +++PG G +SA+R H++ + E+ + LA+A+ + V C Sbjct: 1 MEYYSRQISRLIEEFSKLPGIGAKSAQRMAFHIINRPEEEVKALAQAILDAKENVRYCKQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + ++ C IC + +RDA I+VVE+ DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CFTLTDSELCPICSNPKRDAKTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 NDIRLKELMQRL-QGDVNEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D T+ A+ RT L Sbjct: 180 LEYIDQVTLLRALEGRTEL 198 >gi|296130955|ref|YP_003638205.1| recombination protein RecR [Cellulomonas flavigena DSM 20109] gi|296022770|gb|ADG76006.1| recombination protein RecR [Cellulomonas flavigena DSM 20109] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++L+ L R+PG GP+SA+R H++ + LA+A+ + +V C +CG Sbjct: 1 MYEGAIQDLVDELGRLPGVGPKSAQRIAFHILAADPADVRRLADALTEVKARVQFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +R + I VVE+ D+ A+ER++ YHVLGG+++P+ IGP+D Sbjct: 61 NVAQEPQCRICRDPRRLPTTICVVEEAKDVVAIERTREFRGRYHVLGGAINPIAGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ + E+I A +EG+ TA Y+ L + + ++RLA G+P+G +L+ Sbjct: 121 LRIAQLMTRLADGTVTEVILATDPNVEGEATATYLARLLVPMGLTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 181 YADEVTLGRAFEGRRRL 197 >gi|269793813|ref|YP_003313268.1| DNA replication and repair protein RecR [Sanguibacter keddieii DSM 10542] gi|269095998|gb|ACZ20434.1| DNA replication and repair protein RecR [Sanguibacter keddieii DSM 10542] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 122/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + LAEA+ + KV C ICG Sbjct: 1 MYEGAVQDLIDELGRLPGIGPKSAQRIAFHLLAADAEDARRLAEALTEVKLKVRFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +R +VI VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D Sbjct: 61 NVAESEQCRICQDPRRSVAVICVVEEAKDVVAIERTREFRGKYHVLGGAINPIDNVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++E+I A+ +EG+ TA Y+ L + +++TRLA G+P+G +L+ Sbjct: 121 LRIKELLTRLADGAVQEVILAMDPNVEGEATATYLARMLGPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|222152176|ref|YP_002561336.1| recombination protein RecR [Macrococcus caseolyticus JCSC5402] gi|254790774|sp|B9E8X2|RECR_MACCJ RecName: Full=Recombination protein recR gi|222121305|dbj|BAH18640.1| recombination protein RecR [Macrococcus caseolyticus JCSC5402] Length = 198 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 81/196 (41%), Positives = 129/196 (65%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG GP++A R H++ KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPAPISKLIDSFMKLPGIGPKTASRLAFHVLDMKEDDVVGFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D+ RD S+I VVE+ D+ A+E+ + LYHVL G++SP++ +GPEDI Sbjct: 63 ITDTDPCYICEDKTRDQSMICVVEETKDVIAMEKMREYKGLYHVLHGAISPMEGVGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + SL+ R+ + I+ELI A + IEG++TA YI +K I +K+TRLA+G+P+G +L+Y Sbjct: 123 NVPSLLTRLRDEHIQELILATNPNIEGESTAMYIARLVKPIGIKVTRLAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAITGRTEI 198 >gi|303239745|ref|ZP_07326269.1| recombination protein RecR [Acetivibrio cellulolyticus CD2] gi|302592682|gb|EFL62406.1| recombination protein RecR [Acetivibrio cellulolyticus CD2] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 125/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + LI+ ++PG G ++A+R H++ + + LA ++++ K CS+ Sbjct: 1 MSVYAAPVARLIEEFEKLPGIGHKTAQRLAFHVLNMPIEKVERLASSISDAKLKTKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ ++ C++C RD SVI VVED D+ A+ER K LYHVL G++SP++ IGP Sbjct: 61 CGNLTDSEICSLCSSNTRDESVICVVEDARDVAAMERIKEFKGLYHVLHGAISPMEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI I+ L+ RI+ K I+E+I A + IEG+ TA YI LK I +K TR+A+GIP+G + Sbjct: 121 EDIKIKELLLRIQDKDIKEVIIATNPNIEGEATAMYISKLLKPIGIKATRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLAKALEGRREI 199 >gi|322804302|emb|CBZ01852.1| recombination protein RecR [Clostridium botulinum H04402 065] Length = 198 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+ Sbjct: 1 MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALIKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GP Sbjct: 61 CGNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDIKLRELIRRI-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 180 LEYADEVTLAKALEGRIEL 198 >gi|284028401|ref|YP_003378332.1| recombination protein RecR [Kribbella flavida DSM 17836] gi|283807694|gb|ADB29533.1| recombination protein RecR [Kribbella flavida DSM 17836] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ E + LA + + KV C ICG Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLSADETDVRRLAHVLVQVKEKVKFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ IGP++ Sbjct: 61 NVAEETMCRICRDPRRDLALICVVEEAKDVVAIERTREFRGRYHVLGGAISPIEGIGPDE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ ++ E+I A +EG+ TA Y+ L+ + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELMQRLASGEVTEIILATDPNLEGEATATYLSRLLRPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R + Sbjct: 181 YADEVTLGRAFEGRRSI 197 >gi|119476223|ref|ZP_01616574.1| recombination protein RecR [marine gamma proteobacterium HTCC2143] gi|119450087|gb|EAW31322.1| recombination protein RecR [marine gamma proteobacterium HTCC2143] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 124/194 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I+ L++ L +PG GP+SA+R HL+++ + LAE + + V CS C Sbjct: 3 FSPLIDQLVEALRCLPGVGPKSAQRMAFHLLERDREGGLKLAEQLDTAMHGVARCSSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C+IC + +RD + I VVE AD++A E+S LY VL G LSP+D IGP +I Sbjct: 63 LTEQPRCSICDNFKRDRTTICVVETPADVFAFEQSGIYRGLYFVLMGHLSPIDGIGPAEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L++R++ ++I+E+I A + T+EG+ TA+YI +++K + K++R+A+G+P+G EL+Y Sbjct: 123 GVSDLLQRLQEEEIQEVILATNPTVEGEATAYYITEQVKSMGAKVSRIAHGVPLGGELEY 182 Query: 186 LDDGTIFEAIRSRT 199 +D GT+ A+ R Sbjct: 183 VDSGTLAHALNGRR 196 >gi|84495158|ref|ZP_00994277.1| recombination protein RecR [Janibacter sp. HTCC2649] gi|84384651|gb|EAQ00531.1| recombination protein RecR [Janibacter sp. HTCC2649] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + + L +A+ + KV C C Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLTQDAVDVQRLVDALTQVKVKVRFCVTCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ ++ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D Sbjct: 61 NIAESEQCRICADPRRDLTSICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + L+ R+ + E+I A +EG+ TA Y+ LKG+D+K+TRLA G+P+G +L+ Sbjct: 121 LTFRELMTRLASSDVTEIIIATDPNLEGEATASYLARFLKGMDIKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|302544192|ref|ZP_07296534.1| recombination protein RecR [Streptomyces hygroscopicus ATCC 53653] gi|302461810|gb|EFL24903.1| recombination protein RecR [Streptomyces himastatinicus ATCC 53653] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTEVKEKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C +C D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEAEQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|295694721|ref|YP_003587959.1| recombination protein RecR [Bacillus tusciae DSM 2912] gi|295410323|gb|ADG04815.1| recombination protein RecR [Bacillus tusciae DSM 2912] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 127/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H+++ ++ + L++A+ + + C IC N Sbjct: 4 FPEPISQLIDGFMKLPGIGPKTAQRLAFHVLRMPDEDVLHLSQALVAVKKDLRYCRICCN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC +C D+ RD VI VV+D D+ A+ER++ + +YHVL G++SP++ IGPEDI Sbjct: 64 ITDVDPCTLCRDELRDHRVICVVQDPRDVAAMERTREYHGVYHVLHGAISPMEGIGPEDI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L+ER++ +ELI A + T+EG+ TA ++ +K + VK+TR+A G+PMG +L+Y Sbjct: 124 RVKELLERMKNDLPKELILATNPTVEGEATAMFLTRLVKPLGVKVTRIARGLPMGGDLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 184 ADELTLSQALEGRREI 199 >gi|254385607|ref|ZP_05000932.1| recombination protein recR [Streptomyces sp. Mg1] gi|194344477|gb|EDX25443.1| recombination protein recR [Streptomyces sp. Mg1] Length = 199 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEERCTICRDPRRDTTVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGVVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|49482705|ref|YP_039929.1| recombination protein RecR [Staphylococcus aureus subsp. aureus MRSA252] gi|282903063|ref|ZP_06310956.1| recombination protein RecR [Staphylococcus aureus subsp. aureus C160] gi|282907452|ref|ZP_06315300.1| recombination protein recR [Staphylococcus aureus subsp. aureus Btn1260] gi|282907800|ref|ZP_06315640.1| recombination protein RecR [Staphylococcus aureus subsp. aureus WW2703/97] gi|283959908|ref|ZP_06377349.1| recombination protein RecR [Staphylococcus aureus subsp. aureus A017934/97] gi|295427011|ref|ZP_06819650.1| recombination protein RecR [Staphylococcus aureus subsp. aureus EMRSA16] gi|297588777|ref|ZP_06947418.1| recombination protein R [Staphylococcus aureus subsp. aureus MN8] gi|56749587|sp|Q6GJJ3|RECR_STAAR RecName: Full=Recombination protein recR gi|49240834|emb|CAG39501.1| putative recombination protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282328364|gb|EFB58637.1| recombination protein RecR [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330351|gb|EFB59872.1| recombination protein recR [Staphylococcus aureus subsp. aureus Btn1260] gi|282597522|gb|EFC02481.1| recombination protein RecR [Staphylococcus aureus subsp. aureus C160] gi|283789500|gb|EFC28327.1| recombination protein RecR [Staphylococcus aureus subsp. aureus A017934/97] gi|295129463|gb|EFG59090.1| recombination protein RecR [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577288|gb|EFH96001.1| recombination protein R [Staphylococcus aureus subsp. aureus MN8] gi|315193218|gb|EFU23617.1| recombination protein RecR [Staphylococcus aureus subsp. aureus CGS00] Length = 198 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 86/196 (43%), Positives = 130/196 (66%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLINSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLIER++ ++ ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|134297923|ref|YP_001111419.1| recombination protein RecR [Desulfotomaculum reducens MI-1] gi|172044204|sp|A4J0J1|RECR_DESRM RecName: Full=Recombination protein recR gi|134050623|gb|ABO48594.1| DNA replication and repair protein RecR [Desulfotomaculum reducens MI-1] Length = 200 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 126/194 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + L+ A++PG GP++A+R H++ +L LA+A+ + + CS+C Sbjct: 3 YYSGPVARLVDEFAKLPGIGPKTAQRLAFHVLNSPPELAQGLAKALVEVRQSIKRCSLCC 62 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC D R+++++ VVE+ D+ A+E+++ YHVL G++SP++ I PED Sbjct: 63 NLTDEDPCSICQDTTRNSNLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPED 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R++ I+E+I A ++ +EG+TTA Y+ LK + VK+TR+A+GIP+GS+L+ Sbjct: 123 LTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLE 182 Query: 185 YLDDGTIFEAIRSR 198 Y D T+ +A+ R Sbjct: 183 YADAMTLNKALEGR 196 >gi|138893697|ref|YP_001124150.1| recombination protein RecR [Geobacillus thermodenitrificans NG80-2] gi|196251183|ref|ZP_03149858.1| recombination protein RecR [Geobacillus sp. G11MC16] gi|166221942|sp|A4IJA1|RECR_GEOTN RecName: Full=Recombination protein recR gi|134265210|gb|ABO65405.1| RecR [Geobacillus thermodenitrificans NG80-2] gi|196209309|gb|EDY04093.1| recombination protein RecR [Geobacillus sp. G11MC16] Length = 198 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 127/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R H++ KE + A+A+ ++ + C+ICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D++RD ++I VV+D D+ A+E+ K N LYHVL G++SP++ IGPEDI Sbjct: 63 ITDTDPCYICKDERRDRTMICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R++ + I+E+I A IEG+ TA Y+ LK +KITR+A+G+P+G +L+Y Sbjct: 123 KIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLLKPTGIKITRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|172037739|ref|YP_001804240.1| recombination protein RecR [Cyanothece sp. ATCC 51142] gi|171699193|gb|ACB52174.1| recombination protein [Cyanothece sp. ATCC 51142] Length = 202 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 124/200 (62%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + I + LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V LC Sbjct: 3 KSPIYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGLCK 62 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C + C IC + RD+ + VV D D+ ALE+++ YHVLGG +SP+D IG Sbjct: 63 VCFHFSEQPVCDICRNPNRDSQTVCVVADSRDVIALEKTREYRGKYHVLGGVMSPMDGIG 122 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 PE + IQ L+ R+ + ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG Sbjct: 123 PEQLYIQPLVRRVTQEGVKEIILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGG 181 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 182 DLEYADEVTLARALEGRREL 201 >gi|218246033|ref|YP_002371404.1| recombination protein RecR [Cyanothece sp. PCC 8801] gi|254790764|sp|B7K2B2|RECR_CYAP8 RecName: Full=Recombination protein recR gi|218166511|gb|ACK65248.1| recombination protein RecR [Cyanothece sp. PCC 8801] Length = 197 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI+ L R+PG GP++A+R LH++K+ E + LA A+ KV LC++C Sbjct: 1 MYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPENEIQALASALIEAKKKVGLCNVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + RD I VV D D+ ALE+++ YHVLGG +SP+D IGPE Sbjct: 61 HFSADPICEICRNPNRDKQTICVVADSRDVIALEKTREYKGRYHVLGGVMSPMDGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + IQ L+ R+ ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+ Sbjct: 121 LYIQPLVRRVTQDGVKEVILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLE 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 180 YADEVTLARALEGRREL 196 >gi|153956409|ref|YP_001397174.1| recombination protein RecR [Clostridium kluyveri DSM 555] gi|219856721|ref|YP_002473843.1| hypothetical protein CKR_3378 [Clostridium kluyveri NBRC 12016] gi|189029357|sp|A5N3V7|RECR_CLOK5 RecName: Full=Recombination protein recR gi|254790762|sp|B9DXI6|RECR_CLOK1 RecName: Full=Recombination protein recR gi|146349267|gb|EDK35803.1| RecR [Clostridium kluyveri DSM 555] gi|219570445|dbj|BAH08429.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 198 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TLH++ + A+A+ + CSI Sbjct: 1 MDFYPVAIEKLIEEFAKLPGIGRKTAQRLTLHVLNLPADEVREFAKALVKARGTIKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN +DPCAIC + RD S+I V+E+ D+ ++ER K N +YHVL G++SP+ GP Sbjct: 61 CGNFTDSDPCAICSNPNRDKSIICVIEEPKDIMSMERIKEYNGVYHVLHGNISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+GIP+G Sbjct: 121 EDIKLRELIRRI-NGDVNEVIVATNPNVEGEATAMYISKILKHLGVKVTRIAHGIPVGGN 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ RT + Sbjct: 180 LEYADEVTLLKALEGRTEI 198 >gi|313764792|gb|EFS36156.1| recombination protein RecR [Propionibacterium acnes HL013PA1] gi|313815377|gb|EFS53091.1| recombination protein RecR [Propionibacterium acnes HL059PA1] gi|314916441|gb|EFS80272.1| recombination protein RecR [Propionibacterium acnes HL005PA4] gi|314917282|gb|EFS81113.1| recombination protein RecR [Propionibacterium acnes HL050PA1] gi|314921657|gb|EFS85488.1| recombination protein RecR [Propionibacterium acnes HL050PA3] gi|314930697|gb|EFS94528.1| recombination protein RecR [Propionibacterium acnes HL067PA1] gi|314955186|gb|EFS99591.1| recombination protein RecR [Propionibacterium acnes HL027PA1] gi|314959379|gb|EFT03481.1| recombination protein RecR [Propionibacterium acnes HL002PA1] gi|315099546|gb|EFT71522.1| recombination protein RecR [Propionibacterium acnes HL059PA2] gi|315102224|gb|EFT74200.1| recombination protein RecR [Propionibacterium acnes HL046PA1] gi|327454473|gb|EGF01128.1| recombination protein RecR [Propionibacterium acnes HL087PA3] gi|327456542|gb|EGF03197.1| recombination protein RecR [Propionibacterium acnes HL083PA2] gi|328756236|gb|EGF69852.1| recombination protein RecR [Propionibacterium acnes HL087PA1] gi|328759441|gb|EGF73057.1| recombination protein RecR [Propionibacterium acnes HL025PA2] Length = 201 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 118/194 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L+R+PG GP+ A+R H++ E+ LA+A+ + K C IC Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPEEEANELADALREVKEKAKFCKICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+ Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGR 194 >gi|29831100|ref|NP_825734.1| recombination protein RecR [Streptomyces avermitilis MA-4680] gi|297201258|ref|ZP_06918655.1| recombination protein RecR [Streptomyces sviceus ATCC 29083] gi|73621518|sp|Q82EQ7|RECR_STRAW RecName: Full=Recombination protein recR gi|29608214|dbj|BAC72269.1| putative recombination and repair protein [Streptomyces avermitilis MA-4680] gi|197712880|gb|EDY56914.1| recombination protein RecR [Streptomyces sviceus ATCC 29083] Length = 199 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA+ + + KV C+ CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQCLMEVKAKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEELCNICRDPRRDLSVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|294630548|ref|ZP_06709108.1| recombination protein RecR [Streptomyces sp. e14] gi|292833881|gb|EFF92230.1| recombination protein RecR [Streptomyces sp. e14] Length = 199 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEELCGICRDSRRDQSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|254393634|ref|ZP_05008763.1| recombination protein recR [Streptomyces clavuligerus ATCC 27064] gi|294813446|ref|ZP_06772089.1| Recombination protein recR [Streptomyces clavuligerus ATCC 27064] gi|326441841|ref|ZP_08216575.1| recombination protein RecR [Streptomyces clavuligerus ATCC 27064] gi|197707250|gb|EDY53062.1| recombination protein recR [Streptomyces clavuligerus ATCC 27064] gi|294326045|gb|EFG07688.1| Recombination protein recR [Streptomyces clavuligerus ATCC 27064] Length = 199 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEEQCGICRDPRRDLAVICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|218437593|ref|YP_002375922.1| recombination protein RecR [Cyanothece sp. PCC 7424] gi|259563689|sp|B7KEM9|RECR_CYAP7 RecName: Full=Recombination protein recR gi|218170321|gb|ACK69054.1| recombination protein RecR [Cyanothece sp. PCC 7424] Length = 199 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI+ L R+PG GP++A+R LH++K+ E+ + LA+A+ +V LC +C Sbjct: 1 MFTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPEEEVNTLAKAIVEAKKQVGLCQVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + RD + VV D D+ ALE+++ YHVLGG +SP+D IGPE Sbjct: 61 HLSAESTCEICRNPNRDNQTLCVVADSRDVIALEKTREYQGKYHVLGGVISPMDGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ +I+E+I AIS ++EG+TT Y+ LK K+TR+A+G+PMG +L+ Sbjct: 121 LNISPLVRRVSQHQIKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPMGGDLE 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 180 YADEVTLARALEGRREL 196 >gi|257059083|ref|YP_003136971.1| recombination protein RecR [Cyanothece sp. PCC 8802] gi|256589249|gb|ACV00136.1| recombination protein RecR [Cyanothece sp. PCC 8802] Length = 197 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI+ L R+PG GP++A+R LH++K+ E + LA A+ KV LC++C Sbjct: 1 MYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPENEIQALATALIEAKKKVGLCNVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + RD I VV D D+ ALE+++ YHVLGG +SP+D IGPE Sbjct: 61 HFSADPICEICRNPNRDKQTICVVADSRDVIALEKTREYKGRYHVLGGVMSPMDGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + IQ L+ R+ ++E+I AIS T+EG+TT YI LK K+TR+A+G+PMG +L+ Sbjct: 121 LYIQPLVRRVTQDGVKEVILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGGDLE 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 180 YADEVTLARALEGRREL 196 >gi|21263932|sp|Q8YMF7|RECR_ANASP RecName: Full=Recombination protein recR Length = 197 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG GP++A+R LH++K+ E + LA+A+ ++ LCS+C Sbjct: 1 MYARPLARLIEQLQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC + R+ + I VV D D+ ALE+++ YHVLGG +SP+D IGPE Sbjct: 61 HLSSEPVCEICRNPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ ++ +E+I AIS ++EG+TT Y+ LK K+TR+A+G+P+G +L+ Sbjct: 121 LTITPLLRRVSQQQPKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPVGGDLE 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 180 YADEITLARALEGRREL 196 >gi|307332253|ref|ZP_07611333.1| recombination protein RecR [Streptomyces violaceusniger Tu 4113] gi|306882114|gb|EFN13220.1| recombination protein RecR [Streptomyces violaceusniger Tu 4113] Length = 199 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTQVKEKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C +C D +RD ++I VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEAEQCRVCQDPRRDRAIICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLGRLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|291523177|emb|CBK81470.1| recombination protein RecR [Coprococcus catus GD/7] Length = 198 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ + + LA + + K+ CS Sbjct: 1 MDAYSNQINKLIEELSKLPGIGAKSAQRLAFHIINMPKDQVQNLAGTIVSAREKIRYCSC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ ++ C IC + +RD VI+VVE DL A E+++ +YHVL G++SP+ IGP Sbjct: 61 CWNLTDSELCPICANPKRDHHVIMVVETPRDLAAYEKTQKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R+ + E+I A ++T+EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 SDIRLKELMTRL-QGDVTEVIIATNSTLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|149182695|ref|ZP_01861162.1| recombination protein RecR [Bacillus sp. SG-1] gi|148849605|gb|EDL63788.1| recombination protein RecR [Bacillus sp. SG-1] Length = 198 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 123/194 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N K+ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAARLAFFVLGMKEDTVLEFAKALVNAKRKLTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D +RD S++ VV+D D+ A+E+ K N LYHVL G++SP+D IGPEDI Sbjct: 63 ITDQDPCYICEDTRRDRSIVCVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R++ + + E+I A + IEG+ TA YI LK ++ TR+A+G+P+G +L+Y Sbjct: 123 NVPDLLKRLQDEGVEEVILATNPNIEGEATAMYISRLLKPSGIRTTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRT 199 D+ T+ +A+ R Sbjct: 183 ADEVTLSKALEGRR 196 >gi|147676388|ref|YP_001210603.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum SI] gi|229470332|sp|A5D6B3|RECR_PELTS RecName: Full=Recombination protein recR gi|146272485|dbj|BAF58234.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum SI] Length = 200 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 128/199 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + LI+ LAR+PG GP++A+R +L+ ++ LA A+ V CS+ Sbjct: 1 MDYYAKPVARLIEQLARLPGIGPKTAQRLAFYLLNAPLEVALNLARAVEEARQAVRYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ TDPC IC D +R ++ VVE D+ ALE+++ LYHVL GS+SP++ IGP Sbjct: 61 CGNLTDTDPCFICGDDRRRRDLLCVVERPRDVVALEKARVFKGLYHVLHGSISPVEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I+ L++R+E +RE+I A + T+EG+TTA Y+ +K + V +TR+A+G+P+G++ Sbjct: 121 EQLRIRELLKRLEGGTVREVILATNPTVEGETTALYLAGLIKPLGVSVTRIAHGLPVGAD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEMTLSKALEGRREM 199 >gi|327438118|dbj|BAK14483.1| recombinational DNA repair protein [Solibacillus silvestris StLB046] Length = 198 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R H++ KE + A+A+ + + CS CG+ Sbjct: 3 YPEPISRLIDSFMKLPGIGPKTAARLAFHVLTMKEDTVSTFAKALVDAKRNLMYCSQCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD S I VV+D D+ A+E+ + LYHVL G++SP+D +GPEDI Sbjct: 63 ITDIDPCHICSDKQRDVSTICVVQDPKDVIAMEKMRDYQGLYHVLHGAISPMDGVGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + SL+ R+ ++++ELI A + TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y Sbjct: 123 NVASLLGRLHDERVQELILATNPTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|328883421|emb|CCA56660.1| Recombination protein RecR [Streptomyces venezuelae ATCC 10712] Length = 204 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 124/192 (64%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV Sbjct: 11 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCAVCGNVAQQ 70 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+ Sbjct: 71 EQCNICRDPRRDLTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 130 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+ Sbjct: 131 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 190 Query: 190 TIFEAIRSRTVL 201 T+ A R +L Sbjct: 191 TLGRAFEGRRLL 202 >gi|225575491|ref|ZP_03784101.1| hypothetical protein RUMHYD_03581 [Blautia hydrogenotrophica DSM 10507] gi|225037288|gb|EEG47534.1| hypothetical protein RUMHYD_03581 [Blautia hydrogenotrophica DSM 10507] Length = 201 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 122/201 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M I LI+ L+ +PG G +SA+R H++ + L +A+ + V C Sbjct: 1 MGVDYYSSYISRLIEQLSSLPGIGNKSAQRLAFHIMNMPGDQVEQLVQAIHDAKEHVQYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + + C IC + +RD S I+VVE+ DL A E++ +YHVL G++SP+ I Sbjct: 61 KCCYTLTDKELCPICGNPKRDHSTIMVVENTRDLAAYEKTGKFEGVYHVLHGAISPMLGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+DI ++ L++R++ ++++E+I A ++++EG+TTA YI +K +K++R+A G+P+G Sbjct: 121 GPDDIKLKELMQRLQSEEVKEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y+D+ T+ A+ R L Sbjct: 181 GDLEYIDEVTLLRALEGRVEL 201 >gi|297158533|gb|ADI08245.1| recombination protein RecR [Streptomyces bingchenggensis BCW-1] Length = 199 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPADVRRLAHALTEVKDKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C +C D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEAEQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLTRLADGTVTELILATDPNLEGEATATYLARMVKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|126656915|ref|ZP_01728093.1| recombination protein RecR [Cyanothece sp. CCY0110] gi|126621753|gb|EAZ92462.1| recombination protein RecR [Cyanothece sp. CCY0110] Length = 202 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + I + LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V LC Sbjct: 3 KSPIYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGLCK 62 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C + C IC + RD+ + VV D D+ ALE+++ YHVLGG +SP+D IG Sbjct: 63 VCFHFSEQPICDICRNPNRDSQTVCVVADSRDVIALEKTREYRGKYHVLGGVMSPMDGIG 122 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 PE + IQ+L+ R+ + I+E+I AIS T+EG+TT YI LK K+TR+A+G+PMG Sbjct: 123 PEQLYIQALVRRVTQEGIKEIILAISPTVEGETTTLYIGQLLKPF-TKVTRIAFGLPMGG 181 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 182 DLEYADEVTLARALEGRREL 201 >gi|302553016|ref|ZP_07305358.1| recombination protein RecR [Streptomyces viridochromogenes DSM 40736] gi|302470634|gb|EFL33727.1| recombination protein RecR [Streptomyces viridochromogenes DSM 40736] Length = 199 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA+A+ + KV C+ CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP+D +GP+D Sbjct: 61 NVAQEELCNICRDTRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|302520196|ref|ZP_07272538.1| recombination protein RecR [Streptomyces sp. SPB78] gi|318061709|ref|ZP_07980430.1| recombination protein RecR [Streptomyces sp. SA3_actG] gi|318078458|ref|ZP_07985790.1| recombination protein RecR [Streptomyces sp. SA3_actF] gi|302429091|gb|EFL00907.1| recombination protein RecR [Streptomyces sp. SPB78] Length = 199 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEEHCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|163842076|ref|YP_001626481.1| recombination protein RecR [Renibacterium salmoninarum ATCC 33209] gi|162955552|gb|ABY25067.1| recombination protein [Renibacterium salmoninarum ATCC 33209] Length = 199 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 123/195 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + L ++ + +V CSICG Sbjct: 1 MYEGAVQDLIDELGRLPGIGPKSAQRLAFHILEADPEDMKRLVTSIVTVKERVKFCSICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV D C+IC D +RD ++I VVE+ D+ A+ER+++ LYHVLGG+++P+ +GP+ Sbjct: 61 NVAEQDTCSICRDPRRDPTIICVVEESKDVIAVERTRSFRGLYHVLGGAINPIAGVGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ +I E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+ Sbjct: 121 LRIRELLNRLSDSQIEEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGRR 195 >gi|182437170|ref|YP_001824889.1| recombination protein RecR [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777796|ref|ZP_08237061.1| Recombination protein recR [Streptomyces cf. griseus XylebKG-1] gi|178465686|dbj|BAG20206.1| putative recombination and repair protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658129|gb|EGE42975.1| Recombination protein recR [Streptomyces cf. griseus XylebKG-1] Length = 199 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA ++ + +KV C +CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHSLLEVKDKVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEEQCGICRDARRDRSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGSITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|168184983|ref|ZP_02619647.1| recombination protein RecR [Clostridium botulinum Bf] gi|182671960|gb|EDT83921.1| recombination protein RecR [Clostridium botulinum Bf] Length = 198 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+ Sbjct: 1 MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN DPCAIC + R+ S+I V+E D+ ++E+ + N +YHVL G++SP+ GP Sbjct: 61 CGNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LI RI + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G + Sbjct: 121 EDIKLKELIRRI-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPIGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 180 LEYADEVTLAKALEGRIEL 198 >gi|320009950|gb|ADW04800.1| recombination protein RecR [Streptomyces flavogriseus ATCC 33331] Length = 199 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C ICG Sbjct: 1 MYEGVVQELIDELGRLPGVGPKSAQRIAFHVLQAEPTDVRRLAHALLEVKDKVRFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQQEQCGICRDARRDRSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGSITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|67921773|ref|ZP_00515290.1| RecR protein [Crocosphaera watsonii WH 8501] gi|67856365|gb|EAM51607.1| RecR protein [Crocosphaera watsonii WH 8501] Length = 202 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 127/202 (62%), Gaps = 2/202 (0%) Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M+K I + LI+ L R+PG GP++A+R LH++K+ + + LA+A+ + +V L Sbjct: 1 MEKSLIYTPPLARLIEQLQRLPGVGPKTAQRLALHILKRPDNEIQALAKALIDAKKRVGL 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C +C + C IC + RD+ I VV D D+ ALE+++ YHVLGG +SP+D Sbjct: 61 CKVCFHFSEQPICDICRNPNRDSQTICVVADARDVIALEKTREYRGKYHVLGGVMSPMDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGPE + IQ L+ R+ + ++E+I AIS T+EG+TT+ YI LK K+TR+A+G+PM Sbjct: 121 IGPEQLYIQPLVRRVTQEGVKEVILAISPTVEGETTSLYIGQLLKPF-TKVTRIAFGLPM 179 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L+Y D+ T+ A+ R L Sbjct: 180 GGDLEYADEVTLARALEGRQEL 201 >gi|323701678|ref|ZP_08113350.1| recombination protein RecR [Desulfotomaculum nigrificans DSM 574] gi|323533451|gb|EGB23318.1| recombination protein RecR [Desulfotomaculum nigrificans DSM 574] Length = 200 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 123/194 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + L+ A++PG GP++A+R H++ + LA A+ + + CSIC Sbjct: 3 YYSGPVARLVDEFAKLPGIGPKTAQRLAFHILNAPPEAAQNLARALIEVRQSIKRCSICC 62 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D R+ ++ VVE+ D+ A+E+++ LYHVL G++SP++ +GP++ Sbjct: 63 NLTDEDPCHICRDTTRNPKILCVVEEPRDVVAMEKARGYRGLYHVLHGAISPIEGVGPDN 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R++ ++ E+I A ++ +EG+TTA Y+ LK + VK+TR+A+GIP+GS+L+ Sbjct: 123 LTIKELLNRLQTGEVEEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLE 182 Query: 185 YLDDGTIFEAIRSR 198 Y D T+ +A+ R Sbjct: 183 YADAMTLNKALEGR 196 >gi|302535333|ref|ZP_07287675.1| recombination protein RecR [Streptomyces sp. C] gi|302444228|gb|EFL16044.1| recombination protein RecR [Streptomyces sp. C] Length = 199 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKEKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEELCGICRDPRRDTAVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGAVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|332654895|ref|ZP_08420637.1| recombination protein RecR [Ruminococcaceae bacterium D16] gi|332516238|gb|EGJ45846.1| recombination protein RecR [Ruminococcaceae bacterium D16] Length = 200 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +ENL++ A++PG G +SA+R H++ E A+A+ + + C + Sbjct: 1 MQYFPPALENLVEQFAKLPGVGVKSAQRLAFHVLSMPEDEAAAFAQAILTAKSTIHCCPV 60 Query: 63 CGNVDT-TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C N+ PC+IC +RDAS I VV D D+ A+ERS+ LYHVL G +SP++ +G Sbjct: 61 CQNLTQGEGPCSICSSPRRDASTICVVADPKDVVAMERSREYQGLYHVLHGVISPMNHVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+D+ I+SL+ER+ + E+I A + EG+ TA Y+ L+ VK+TRLAYGIP+GS Sbjct: 121 PDDLHIKSLVERVSAGGVDEVIMATNPDTEGEATAMYLSRLLRPFGVKVTRLAYGIPVGS 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 L+Y DD T+ A+ R + Sbjct: 181 HLEYADDATLMRALEGRREM 200 >gi|290958616|ref|YP_003489798.1| DNA modification/recombination protein [Streptomyces scabiei 87.22] gi|260648142|emb|CBG71250.1| putative DNA modification/recombination protein [Streptomyces scabiei 87.22] Length = 199 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C+ CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEELCGICRDSRRDVTVICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGRVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|89094007|ref|ZP_01166951.1| recombination protein RecR [Oceanospirillum sp. MED92] gi|89081681|gb|EAR60909.1| recombination protein RecR [Oceanospirillum sp. MED92] Length = 199 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I+ LI L +PG GP+SA+R HL+++ LAEA+ +++ C +C Sbjct: 3 FSPLIQQLITSLRCLPGVGPKSAQRMAFHLLERDPDGALALAEALQKSVSEIGHCKLCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T+ C IC RD+SV+ ++E D+ A+E++ N LY VL G LSP+D IGPED+ Sbjct: 63 LSETEICDICSATDRDSSVLCILESPIDVLAVEQTGGFNGLYFVLSGHLSPIDGIGPEDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ER++ I+ELI A + T+EG+ TAHYI ++K + VK++R+A+G+P+G EL++ Sbjct: 123 GIDKLLERVQSSDIKELILATNPTVEGEATAHYIAAQVKDLGVKVSRIAHGVPVGGELEF 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R L Sbjct: 183 VDGGTLAHALAGRRSL 198 >gi|291532774|emb|CBL05887.1| recombination protein RecR [Megamonas hypermegale ART12/1] Length = 198 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 121/194 (62%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + + LI+ +PG G ++A R H++ + LA+A+ K+ CS C N+ Sbjct: 5 EPMAKLIEHFRTLPGIGSKTAVRLAYHILDMEPAQAKALAQAIIEAKEKIGFCSCCFNLS 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 TDPCAIC RD S+I VVE D+ A+ER + +YHVL G+LSP++ +GPEDI I Sbjct: 65 DTDPCAICTSSNRDHSIICVVEHPKDVVAMERMRDYKGVYHVLHGALSPIEGVGPEDIHI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R+ K++E+I A + IEG+ TA YI LK + +K+TR+A+G+P+G +L+Y D Sbjct: 125 KELLNRLYDDKVKEVIMATNPNIEGEATAMYIAKLLKPLGIKVTRIAHGLPVGGDLEYAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+ +AI +R + Sbjct: 185 EVTLAKAIENRREM 198 >gi|295837978|ref|ZP_06824911.1| recombination protein RecR [Streptomyces sp. SPB74] gi|197699471|gb|EDY46404.1| recombination protein RecR [Streptomyces sp. SPB74] Length = 199 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQEERCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|327334776|gb|EGE76487.1| recombination protein RecR [Propionibacterium acnes HL097PA1] Length = 201 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 117/194 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+ Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGR 194 >gi|229819048|ref|YP_002880574.1| recombination protein RecR [Beutenbergia cavernae DSM 12333] gi|229564961|gb|ACQ78812.1| recombination protein RecR [Beutenbergia cavernae DSM 12333] Length = 199 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H++ +G LA A+ + +V C CG Sbjct: 1 MYEGAVQDLITELGRLPGVGPKSAQRIAFHVLAADPDDVGRLAHALTEVKARVRFCETCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC+D +R+A+++ VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D Sbjct: 61 NVSEEAQCRICLDPRRNAAILCVVEEPKDVVAIERTREFRGRYHVLGGAINPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++ E+I A +EG+ TA Y+ L G+ + ++RLA G+P+G +L+ Sbjct: 121 LRIRELMTRLADGQVTEVIIATDPNVEGEATATYLARMLAGMGITVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R + Sbjct: 181 YADEITLGRAFEGRRRI 197 >gi|50841698|ref|YP_054925.1| putative recombination protein RecR [Propionibacterium acnes KPA171202] gi|282853261|ref|ZP_06262598.1| recombination protein RecR [Propionibacterium acnes J139] gi|289424537|ref|ZP_06426320.1| recombination protein RecR [Propionibacterium acnes SK187] gi|289428817|ref|ZP_06430497.1| recombination protein RecR [Propionibacterium acnes J165] gi|295129773|ref|YP_003580436.1| recombination protein RecR [Propionibacterium acnes SK137] gi|73621506|sp|Q6AB99|RECR_PROAC RecName: Full=Recombination protein recR gi|50839300|gb|AAT81967.1| putative recombination protein RecR [Propionibacterium acnes KPA171202] gi|282582714|gb|EFB88094.1| recombination protein RecR [Propionibacterium acnes J139] gi|289155234|gb|EFD03916.1| recombination protein RecR [Propionibacterium acnes SK187] gi|289157818|gb|EFD06041.1| recombination protein RecR [Propionibacterium acnes J165] gi|291375135|gb|ADD98989.1| recombination protein RecR [Propionibacterium acnes SK137] gi|313772742|gb|EFS38708.1| recombination protein RecR [Propionibacterium acnes HL074PA1] gi|313793233|gb|EFS41300.1| recombination protein RecR [Propionibacterium acnes HL110PA1] gi|313802803|gb|EFS44019.1| recombination protein RecR [Propionibacterium acnes HL110PA2] gi|313806719|gb|EFS45224.1| recombination protein RecR [Propionibacterium acnes HL087PA2] gi|313811223|gb|EFS48937.1| recombination protein RecR [Propionibacterium acnes HL083PA1] gi|313813995|gb|EFS51709.1| recombination protein RecR [Propionibacterium acnes HL025PA1] gi|313817486|gb|EFS55200.1| recombination protein RecR [Propionibacterium acnes HL046PA2] gi|313821298|gb|EFS59012.1| recombination protein RecR [Propionibacterium acnes HL036PA1] gi|313824760|gb|EFS62474.1| recombination protein RecR [Propionibacterium acnes HL036PA2] gi|313826422|gb|EFS64136.1| recombination protein RecR [Propionibacterium acnes HL063PA1] gi|313828819|gb|EFS66533.1| recombination protein RecR [Propionibacterium acnes HL063PA2] gi|313832226|gb|EFS69940.1| recombination protein RecR [Propionibacterium acnes HL007PA1] gi|313834282|gb|EFS71996.1| recombination protein RecR [Propionibacterium acnes HL056PA1] gi|313840339|gb|EFS78053.1| recombination protein RecR [Propionibacterium acnes HL086PA1] gi|314922446|gb|EFS86277.1| recombination protein RecR [Propionibacterium acnes HL001PA1] gi|314926532|gb|EFS90363.1| recombination protein RecR [Propionibacterium acnes HL036PA3] gi|314961564|gb|EFT05665.1| recombination protein RecR [Propionibacterium acnes HL002PA2] gi|314964644|gb|EFT08744.1| recombination protein RecR [Propionibacterium acnes HL082PA1] gi|314969352|gb|EFT13450.1| recombination protein RecR [Propionibacterium acnes HL037PA1] gi|314974377|gb|EFT18472.1| recombination protein RecR [Propionibacterium acnes HL053PA1] gi|314976989|gb|EFT21084.1| recombination protein RecR [Propionibacterium acnes HL045PA1] gi|314980019|gb|EFT24113.1| recombination protein RecR [Propionibacterium acnes HL072PA2] gi|314982795|gb|EFT26887.1| recombination protein RecR [Propionibacterium acnes HL110PA3] gi|314985373|gb|EFT29465.1| recombination protein RecR [Propionibacterium acnes HL005PA1] gi|314987436|gb|EFT31527.1| recombination protein RecR [Propionibacterium acnes HL005PA2] gi|314989200|gb|EFT33291.1| recombination protein RecR [Propionibacterium acnes HL005PA3] gi|315078846|gb|EFT50868.1| recombination protein RecR [Propionibacterium acnes HL053PA2] gi|315081811|gb|EFT53787.1| recombination protein RecR [Propionibacterium acnes HL078PA1] gi|315082835|gb|EFT54811.1| recombination protein RecR [Propionibacterium acnes HL027PA2] gi|315086410|gb|EFT58386.1| recombination protein RecR [Propionibacterium acnes HL002PA3] gi|315087897|gb|EFT59873.1| recombination protein RecR [Propionibacterium acnes HL072PA1] gi|315091448|gb|EFT63424.1| recombination protein RecR [Propionibacterium acnes HL110PA4] gi|315094386|gb|EFT66362.1| recombination protein RecR [Propionibacterium acnes HL060PA1] gi|315097212|gb|EFT69188.1| recombination protein RecR [Propionibacterium acnes HL038PA1] gi|315105108|gb|EFT77084.1| recombination protein RecR [Propionibacterium acnes HL050PA2] gi|315107697|gb|EFT79673.1| recombination protein RecR [Propionibacterium acnes HL030PA1] gi|315109894|gb|EFT81870.1| recombination protein RecR [Propionibacterium acnes HL030PA2] gi|327331272|gb|EGE73011.1| recombination protein RecR [Propionibacterium acnes HL096PA2] gi|327333905|gb|EGE75622.1| recombination protein RecR [Propionibacterium acnes HL096PA3] gi|327444626|gb|EGE91280.1| recombination protein RecR [Propionibacterium acnes HL013PA2] gi|327447350|gb|EGE94004.1| recombination protein RecR [Propionibacterium acnes HL043PA1] gi|327450462|gb|EGE97116.1| recombination protein RecR [Propionibacterium acnes HL043PA2] gi|327457182|gb|EGF03837.1| recombination protein RecR [Propionibacterium acnes HL092PA1] gi|328758130|gb|EGF71746.1| recombination protein RecR [Propionibacterium acnes HL020PA1] gi|328761181|gb|EGF74723.1| recombination protein RecR [Propionibacterium acnes HL099PA1] gi|332674612|gb|AEE71428.1| recombination protein RecR [Propionibacterium acnes 266] Length = 201 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 117/194 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+ Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGR 194 >gi|309390264|gb|ADO78144.1| DNA replication and repair protein RecR [Halanaerobium praevalens DSM 2228] Length = 199 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 119/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + LI L+++PG GP++ARR + +++ + + + LA+A+ ++ CS Sbjct: 1 MNPYPKPMGKLIGELSKLPGIGPKTARRLSFYILGQPKTDVKNLADALLEAREQINYCSN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ + C C + R+ I VVE D+ A+E++ LYHVL G++SP+D IGP Sbjct: 61 CNHLTEGETCTFCQSEARNRRTICVVESPRDVVAMEKTGEYKGLYHVLHGAISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++I I+SLI R++ + E+I A EG TA Y+ +K + VK+TR+A+GIP+G + Sbjct: 121 DEIKIRSLIPRLKQDAVEEIIVATDPNAEGDATAMYLAKLIKPLGVKVTRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R L Sbjct: 181 LEYADEVTLSKALEGRREL 199 >gi|187776531|ref|ZP_02993004.1| hypothetical protein CLOSPO_00036 [Clostridium sporogenes ATCC 15579] gi|187775190|gb|EDU38992.1| hypothetical protein CLOSPO_00036 [Clostridium sporogenes ATCC 15579] Length = 201 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 123/198 (62%), Gaps = 1/198 (0%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 IE LI+ A++PG G ++A+R TL+++ ++ + +EA+ + CS+C Sbjct: 5 DFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFSEALVKARGTIKYCSVC 64 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 GN DPCAIC + RD S+I V+E D+ ++E+ + N +YHVL G++SP+ GPE Sbjct: 65 GNFTDKDPCAICGNPNRDKSIICVIEQPKDIMSMEKIREYNGVYHVLHGNISPMAGRGPE 124 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 DI ++ LI R+ + E+I A + +EG+ TA YI LK + VK+TR+A+G+P+G +L Sbjct: 125 DIKLRELIRRV-DGSVNEVIVATNPNVEGEATAMYISKILKPLGVKVTRIAHGVPVGGDL 183 Query: 184 DYLDDGTIFEAIRSRTVL 201 +Y D+ T+ +A+ R L Sbjct: 184 EYADEVTLAKALEGRIEL 201 >gi|323488474|ref|ZP_08093720.1| recombination protein RecR [Planococcus donghaensis MPA1U2] gi|323397866|gb|EGA90666.1| recombination protein RecR [Planococcus donghaensis MPA1U2] Length = 198 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 126/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L++ ++PG GP++A R ++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPISKLMESFMKLPGIGPKTAARLAFFVLGMKEDTVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC DQQRD + I VV+D D+ A+E+ + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDVDPCHICQDQQRDRTTICVVQDPKDVIAMEKMRDYKGLYHVLQGAISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + SL++R++ +++ ELI A + TIEG+ TA YI ++ ++ TR+A+G+P+G +L+Y Sbjct: 123 NVPSLLKRLQDEEVEELILATNPTIEGEATAMYISRLVRPSGIRTTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLSKALEGRREL 198 >gi|75674565|ref|YP_316986.1| recombination protein RecR [Nitrobacter winogradskyi Nb-255] gi|123614211|sp|Q3SVQ7|RECR_NITWN RecName: Full=Recombination protein recR gi|74419435|gb|ABA03634.1| RecR protein [Nitrobacter winogradskyi Nb-255] Length = 201 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 112/199 (56%), Positives = 151/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +TG EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C Sbjct: 1 MPTAVTGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIDRIRVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT PC IC D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 61 ETCGNIDTRSPCTICTDARRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G Sbjct: 121 GPQDLTIDALVARAHDPRVAEIVLALNATVDGQTTAHYITDLLGEANVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|332971096|gb|EGK10064.1| recombination protein R [Desmospora sp. 8437] Length = 198 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 125/195 (64%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + I LI R+PG GP++A+R ++ +E+ + LA+A+ + + C +C N+ Sbjct: 4 PEPISKLIDGFMRLPGIGPKTAQRLAFFVLGMEEEDVMELAKALVHAKRDLKRCQVCSNI 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 C++C D+ RD S+I VV+D D+ A+ER++ LYHVL G++SP++ IGP+++ Sbjct: 64 TDQPVCSVCRDKSRDRSMICVVQDPRDVIAMERTREYAGLYHVLHGAISPMEGIGPDELS 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I L++R+E + ++E+I A + IEG+ TA Y+ +K +K+TR+A+G+P+G +L+Y Sbjct: 124 IPDLLKRLEDETVQEMILATNPNIEGEATAMYLQRLVKPFGIKVTRIAHGLPVGGDLEYA 183 Query: 187 DDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 184 DEVTLTKALEGRREL 198 >gi|319405114|emb|CBI78720.1| recombination protein RecR [Bartonella sp. AR 15-3] Length = 201 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 128/199 (64%), Positives = 158/199 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI+ LARIPG GPRSARRA L+L+KKKE LL PL AM NKV +C Sbjct: 1 MSKHIAGPEIERLIQFLARIPGLGPRSARRAALYLIKKKETLLEPLGSAMLETANKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDTTDPC+IC D +RD S+IIVVED++DLWALER+K ++A YHVLGG LSPLD I Sbjct: 61 SVCGNVDTTDPCSICTDPRRDESIIIVVEDISDLWALERAKFLSARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI D+L +KITRLA+G+P+G Sbjct: 121 GPDELNIISLINRVTNNSITEIILAVNATVEGQTTAHYITDQLSQFSIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGT+ A+++RT Sbjct: 181 GELDYLDDGTLAAALQART 199 >gi|282863698|ref|ZP_06272756.1| recombination protein RecR [Streptomyces sp. ACTE] gi|282561399|gb|EFB66943.1| recombination protein RecR [Streptomyces sp. ACTE] Length = 199 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + LA A+ + +KV C +CG Sbjct: 1 MYEGVVQELIDELGRLPGVGPKSAQRIAFHVLQAEPTDVRRLAHALLEVKDKVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + CAIC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAQQEQCAICRDARRDRTVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+ Sbjct: 121 LRIRELLARLADGTITELILATDPNLEGEATATYLARMVKPMGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|239637705|ref|ZP_04678675.1| recombination protein RecR [Staphylococcus warneri L37603] gi|239596730|gb|EEQ79257.1| recombination protein RecR [Staphylococcus warneri L37603] Length = 198 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R + H + KE + A+A+ ++ ++ CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLSFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD SVI VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITEKDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREFKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ER++ +++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPALVERLKNDEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|228474164|ref|ZP_04058901.1| recombination protein RecR [Staphylococcus hominis SK119] gi|228271859|gb|EEK13196.1| recombination protein RecR [Staphylococcus hominis SK119] Length = 198 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 83/196 (42%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R + + KE + A+A+ ++ ++ CSICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCSICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD S+I VVED D+ A+E+ + LYHVL GS+SP+D IGPEDI Sbjct: 63 ITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|188584659|ref|YP_001916204.1| DNA replication and repair protein RecR [Natranaerobius thermophilus JW/NM-WN-LF] gi|229470330|sp|B2A302|RECR_NATTJ RecName: Full=Recombination protein recR gi|179349346|gb|ACB83616.1| DNA replication and repair protein RecR [Natranaerobius thermophilus JW/NM-WN-LF] Length = 199 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I LI+ L+ +PG GP++A R H+V E + L A+ + +KV C Sbjct: 1 MSN--YPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFEC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N+ DPC IC D+ RD+++I VV+D D+ A+E+ + YHVL G +SP++ I Sbjct: 59 STCNNLTDKDPCTICQDESRDSNLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ +++L++RI+ + I EL+ A T+EG+ TA Y+ +K + V++TRLAYG+PMG Sbjct: 119 GPDDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKLVKPLGVRVTRLAYGLPMG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ +A R L Sbjct: 179 GDLEYADEMTLQQAFEGRKEL 199 >gi|256398117|ref|YP_003119681.1| recombination protein RecR [Catenulispora acidiphila DSM 44928] gi|256364343|gb|ACU77840.1| recombination protein RecR [Catenulispora acidiphila DSM 44928] Length = 199 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L +P GP+SA+R HL++ + LAE + +V C++C Sbjct: 1 MYEGVVQDLIDELGHLPNIGPKSAQRIAFHLLQADPADVRRLAEVLIRAKEQVRFCAVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RD S + VVE+ D+ A+E+++ YHVLGG++SP+D +GP+D Sbjct: 61 NVAEQQECKICRDPRRDPSSLCVVEESKDVVAVEKTREFRGRYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L++R+ I E+I A +EG+ TA Y+ +K + +++TRLA G+P+G +L+ Sbjct: 121 LRVKELLKRLADGVITEVILATDPNLEGEATATYLARLIKPLGLRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 181 YADEVTLGRAFEGRRQL 197 >gi|319406560|emb|CBI80202.1| recombination protein RecR [Bartonella sp. 1-1C] Length = 201 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 127/199 (63%), Positives = 158/199 (79%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE+LI++LARIPG GPRSARRA L+L+KKKE LL PL A+ NKV +C Sbjct: 1 MSKHIAGPEIEHLIQLLARIPGLGPRSARRAALYLIKKKETLLEPLGSALQETANKVRIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGNVDTTDPC+IC D RD S+IIVVED++DLWALER+K + A YHVLGG LSPLD I Sbjct: 61 SICGNVDTTDPCSICTDPHRDESIIIVVEDISDLWALERAKFLLARYHVLGGRLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I SLI R+ I E+I A++AT+EGQTTAHYI ++L +KITRLA+G+P+G Sbjct: 121 GPDELNIASLINRVTNNSITEIILAVNATVEGQTTAHYITNQLSQSSIKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGT+ A+++RT Sbjct: 181 GELDYLDDGTLAAALQART 199 >gi|239916819|ref|YP_002956377.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC 2665] gi|281414721|ref|ZP_06246463.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC 2665] gi|289706014|ref|ZP_06502387.1| recombination protein RecR [Micrococcus luteus SK58] gi|239838026|gb|ACS29823.1| DNA replication and repair protein RecR [Micrococcus luteus NCTC 2665] gi|289557216|gb|EFD50534.1| recombination protein RecR [Micrococcus luteus SK58] Length = 199 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 128/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + + LA+A+ + ++V LCS+C Sbjct: 1 MYQGAVQDLIDELGRLPGIGPKSAQRIAFHMLEADREDMLRLADAIRTVKDRVRLCSVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C++C D++RD S I VVE+ D+ A+ER++A YHVLGG+++P+ IGPE Sbjct: 61 NVSEDEVCSLCRDERRDRSQICVVEESQDVMAMERTRAFQGRYHVLGGAINPIAGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R++ + ++E+I A +EG+ TA Y+ L +++TRLA G+P+G +L+ Sbjct: 121 LHVRELLTRLQDEAVQEVILATDPNLEGEATATYLGRLLGATGIRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R ++ Sbjct: 181 YADEVTLGRAFEGRRLI 197 >gi|209886653|ref|YP_002290510.1| recombination protein RecR [Oligotropha carboxidovorans OM5] gi|259563701|sp|B6JJQ1|RECR_OLICO RecName: Full=Recombination protein recR gi|209874849|gb|ACI94645.1| recombination protein RecR [Oligotropha carboxidovorans OM5] Length = 201 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 110/199 (55%), Positives = 152/199 (76%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C Sbjct: 1 MASTVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT +PC IC D +RD ++I+VV DV+DLWALER+ A YHVLG +LSPLD I Sbjct: 61 HTCGNIDTQNPCTICSDPRRDPAIIVVVADVSDLWALERAHATQGRYHVLGATLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R +V ++ E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G Sbjct: 121 GPQDLTIDALVTRAQVPEVTEIILALNATVDGQTTAHYVTDMLQDANVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|154505549|ref|ZP_02042287.1| hypothetical protein RUMGNA_03086 [Ruminococcus gnavus ATCC 29149] gi|153794207|gb|EDN76627.1| hypothetical protein RUMGNA_03086 [Ruminococcus gnavus ATCC 29149] Length = 198 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ +R+PG G +SA+R H++ + + LA+++ + N V C+ Sbjct: 1 MDYYSNQISRLIEEFSRLPGIGAKSAQRLAFHIINMPKDQVENLAKSIVDARNNVRYCAQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +RD I+VVE DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDRELCPICSNPERDQRTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIRLKELMERL-QQDVDEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|213691082|ref|YP_002321668.1| recombination protein RecR [Bifidobacterium longum subsp. infantis ATCC 15697] gi|296453326|ref|YP_003660469.1| recombination protein RecR [Bifidobacterium longum subsp. longum JDM301] gi|254790753|sp|B7GT67|RECR_BIFLI RecName: Full=Recombination protein recR gi|213522543|gb|ACJ51290.1| recombination protein RecR [Bifidobacterium longum subsp. infantis ATCC 15697] gi|296182757|gb|ADG99638.1| recombination protein RecR [Bifidobacterium longum subsp. longum JDM301] gi|320457138|dbj|BAJ67759.1| recombination protein RecR [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 200 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI R+PG GP+ A+R +++ E LAEA+ + K+ C Sbjct: 1 MALAYDG-AIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV + PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ + Sbjct: 60 DICGNVCESSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL++R+E +++E+I A+ IEG+ T Y+ L+ + VK+TRLA G+P+G Sbjct: 120 GPADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S+L+Y D+ T+ A+ R Sbjct: 180 SDLEYADEITLGRALAGRRE 199 >gi|325264935|ref|ZP_08131663.1| recombination protein RecR [Clostridium sp. D5] gi|324029924|gb|EGB91211.1| recombination protein RecR [Clostridium sp. D5] Length = 198 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ +R+PG G +SA+R H++ ++ + LA+++ + N V C+ Sbjct: 1 MDYYSNQISRLIEEFSRLPGIGAKSAQRLAFHIINMPQEQVENLAKSLVDARNNVRYCAQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDRELCPICNNPDRDQKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIRLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|116669120|ref|YP_830053.1| recombination protein RecR [Arthrobacter sp. FB24] gi|172044057|sp|A0JSD3|RECR_ARTS2 RecName: Full=Recombination protein recR gi|116609229|gb|ABK01953.1| DNA replication and repair protein RecR [Arthrobacter sp. FB24] Length = 199 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 121/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ Q + L EA+ + +V C++CG Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKERVKFCTVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD S+I VVE+ D+ A+ER+++ YHVLGG+++P+ +GPE Sbjct: 61 NVTEQELCNICRDPRRDPSIICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGVGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+ Sbjct: 121 LRIRELLTRLNDGAIQEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|119714585|ref|YP_921550.1| recombination protein RecR [Nocardioides sp. JS614] gi|171704603|sp|A1SDH8|RECR_NOCSJ RecName: Full=Recombination protein recR gi|119535246|gb|ABL79863.1| DNA replication and repair protein RecR [Nocardioides sp. JS614] Length = 199 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 120/196 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+ A+R HL++ + LA+ + + KV CSIC Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV D C IC D +RD SV+ VVE+ D+ A+ER++ YHVLGG++SP+D +GPE Sbjct: 61 NVSQDDQCRICRDPRRDPSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I E+I A +EG+ TA Y+ LK +++++TRLA G+P+G +L+ Sbjct: 121 LRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLKPLELRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFAGRRS 196 >gi|254786714|ref|YP_003074143.1| recombination protein RecR [Teredinibacter turnerae T7901] gi|237687086|gb|ACR14350.1| recombination protein RecR [Teredinibacter turnerae T7901] Length = 197 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ LI L +PG GP+SA R HL+++ + L++A+A +V C C Sbjct: 1 MFSPLIDQLITSLRVLPGVGPKSATRMAFHLLERNREGAQALSQALAEASAQVKRCEQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC +RD ++ VVE AD+ A+E+S + +Y VL G LSP+D +GP + Sbjct: 61 TLTEQPCCAICASSKRDRQLMCVVESPADVVAIEQSGTFSGVYFVLHGKLSPIDGVGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L ER + + I E+I A + T+EG+ TAHYI ++ K +K+TR+A+G+P+G EL+ Sbjct: 121 IGIDQLEERFQAEPISEVIIATNPTVEGEATAHYIAERAKKNAIKVTRIAHGVPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D GT+ AI SR + Sbjct: 181 YIDGGTLAHAISSRREI 197 >gi|119961171|ref|YP_946469.1| recombination protein RecR [Arthrobacter aurescens TC1] gi|171704623|sp|A1R2K7|RECR_ARTAT RecName: Full=Recombination protein recR gi|119948030|gb|ABM06941.1| recombination protein RecR [Arthrobacter aurescens TC1] Length = 199 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 120/195 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + L A+ + +V C++C Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPEDMKRLVTAITTVKERVKFCTVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC DQ+RD SVI VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE Sbjct: 61 NVTEQETCNICRDQRRDPSVICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+ Sbjct: 121 LRIRELLTRLNDGAIQEIIIATDPNLEGEATATYLARMLKSIGITVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|253580409|ref|ZP_04857674.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848139|gb|EES76104.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 199 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 121/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ L+ +PG G +SA+R H++ + + L ++ V C Sbjct: 1 MEYYSSHINKLIEQLSHLPGIGAKSAQRLAFHIMNMPKDQVEQLTSSITGARENVQYCKC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +RD SVI+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CCTLTDREICPICSNDKRDHSVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L++R+ +++E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 DDIKLKELMQRLAKDEVKEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLLRALEGRVEL 199 >gi|225387322|ref|ZP_03757086.1| hypothetical protein CLOSTASPAR_01074 [Clostridium asparagiforme DSM 15981] gi|225046571|gb|EEG56817.1| hypothetical protein CLOSTASPAR_01074 [Clostridium asparagiforme DSM 15981] Length = 198 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ + + LA +M + N V C Sbjct: 1 MDYYSSQITKLIEELSKLPGVGAKSAQRLAFHIINMPREQVDELARSMTDAKNNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDRELCPICSSDKRNHKEIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA YI +K VK+TR+A G+P+G + Sbjct: 121 NDIKLKELMQRL-QSDVEEVIIATNSSLEGETTAMYISKLIKPTGVKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|254502115|ref|ZP_05114266.1| recombination protein RecR [Labrenzia alexandrii DFL-11] gi|222438186|gb|EEE44865.1| recombination protein RecR [Labrenzia alexandrii DFL-11] Length = 202 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 123/198 (62%), Positives = 166/198 (83%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 QK++ G EIE LI++LA++PG GPRSARRA LHL+KKK+QLL PL+EAM + +CS Sbjct: 3 QKQVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLSEAMGIAVRDIGICS 62 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +CG VDT+DPC IC D++RD SV++VVEDV+DLWALER+ AVNA YHVLGG+LSPLD +G Sbjct: 63 VCGTVDTSDPCTICSDEKRDPSVLVVVEDVSDLWALERASAVNARYHVLGGTLSPLDGVG 122 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+D+ + SL++R +I+E+I AISAT+EGQTTAHYIMD+L +DV +T+LA+G+P+G Sbjct: 123 PDDLNLASLVDRCGAPEIQEVILAISATVEGQTTAHYIMDQLGHLDVHVTKLAHGVPVGG 182 Query: 182 ELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ +A+++RT Sbjct: 183 ELDYLDEGTLAQALKART 200 >gi|314965632|gb|EFT09731.1| recombination protein RecR [Propionibacterium acnes HL082PA2] Length = 201 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 117/194 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+ Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGVTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGR 194 >gi|314935125|ref|ZP_07842478.1| recombination protein RecR [Staphylococcus hominis subsp. hominis C80] gi|313656460|gb|EFS20199.1| recombination protein RecR [Staphylococcus hominis subsp. hominis C80] Length = 198 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 83/196 (42%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A+R + + KE + A+A+ ++ ++ C+ICG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCNICGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+QRD S+I VVED D+ A+E+ K LYHVL GS+SP+D IGPEDI Sbjct: 63 ITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMKEYKGLYHVLHGSISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +LI+R++ ++++ELI A++ +EG++TA YI +K I +K+TRLA G+ +G +L+Y Sbjct: 123 NIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI RT + Sbjct: 183 ADEVTLSKAIAGRTEM 198 >gi|333026055|ref|ZP_08454119.1| putative recombination protein RecR [Streptomyces sp. Tu6071] gi|332745907|gb|EGJ76348.1| putative recombination protein RecR [Streptomyces sp. Tu6071] Length = 195 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 124/192 (64%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV C++CGNV Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCGNVAQE 61 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+ Sbjct: 62 EHCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+ Sbjct: 122 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 181 Query: 190 TIFEAIRSRTVL 201 T+ A R +L Sbjct: 182 TLGRAFEGRRLL 193 >gi|332671907|ref|YP_004454915.1| recombination protein RecR [Cellulomonas fimi ATCC 484] gi|332340945|gb|AEE47528.1| recombination protein RecR [Cellulomonas fimi ATCC 484] Length = 199 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 116/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H++ + L++A+ + +V C +CG Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHILAADPADVRRLSDALVEVKRRVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV D C IC D +R + + VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D Sbjct: 61 NVAQEDQCRICRDPRRSPATLCVVEEPKDVVAIERTREFRGRYHVLGGAINPIAGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ + E+I A +EG+ TA Y+ L + + ++RLA G+P+G +L+ Sbjct: 121 LRIAQLMTRLADGVVTEVILATDPNVEGEATATYLARLLVPMGLTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R + Sbjct: 181 YADEVTLGRAFEGRRRI 197 >gi|329939343|ref|ZP_08288679.1| DNA modification/recombination protein [Streptomyces griseoaurantiacus M045] gi|329301572|gb|EGG45466.1| DNA modification/recombination protein [Streptomyces griseoaurantiacus M045] Length = 195 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 78/192 (40%), Positives = 125/192 (65%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCSVCGNVAQE 61 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + CAIC D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+ Sbjct: 62 ERCAICRDARRDLAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ + ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+Y D+ Sbjct: 122 LLARLADGAVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEV 181 Query: 190 TIFEAIRSRTVL 201 T+ A R +L Sbjct: 182 TLGRAFEGRRLL 193 >gi|295107931|emb|CBL21884.1| recombination protein RecR [Ruminococcus obeum A2-162] Length = 199 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ L+ +PG GP+SA+R H++ + + LA ++ K+ C Sbjct: 1 MEYYSTHINKLIEQLSHLPGIGPKSAQRLAFHIMNMPKDQVEQLASSITGAREKIRYCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +RDA I+VVE+ DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CCTLTDQELCPICSNPKRDAGTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L++R++ + I+E+I A ++++EG+TTA YI +K ++++R+A G+P+G + Sbjct: 121 DDIRLKELMQRLQSEDIKEVIIATNSSLEGETTAMYISKLIKPTGIRVSRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLLRALEGRVDL 199 >gi|85717150|ref|ZP_01048109.1| recombination protein RecR [Nitrobacter sp. Nb-311A] gi|85696041|gb|EAQ33940.1| recombination protein RecR [Nitrobacter sp. Nb-311A] Length = 201 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 110/199 (55%), Positives = 151/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +TG EI+ LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C Sbjct: 1 MPTAVTGPEIDRLIQLLARLPGLGPRSARRAALHLIKKREALMAPLASALQVAIDRILVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 61 ETCGNIDTRSPCTVCTDVRRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G Sbjct: 121 GPQDLTIDALVSRAHDSRVTEIVLALNATVDGQTTAHYITDLLGDANVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|325962020|ref|YP_004239926.1| DNA replication and repair protein RecR [Arthrobacter phenanthrenivorans Sphe3] gi|323468107|gb|ADX71792.1| DNA replication and repair protein RecR [Arthrobacter phenanthrenivorans Sphe3] Length = 199 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 121/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ Q + L EA+ + +V C++CG Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKERVKFCTVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE Sbjct: 61 NVTEQELCNICRDPRRDPAVICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+ Sbjct: 121 LRIRELLTRLNDGAIQEVIIATDPNLEGEATATYLARMLKTIGITVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|225026636|ref|ZP_03715828.1| hypothetical protein EUBHAL_00887 [Eubacterium hallii DSM 3353] gi|224956006|gb|EEG37215.1| hypothetical protein EUBHAL_00887 [Eubacterium hallii DSM 3353] Length = 199 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 119/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I NLI+ L R+PG G +SA+R H++ E+ + LA+ + K+ C Sbjct: 1 MNYYSTQITNLIEELRRLPGIGSKSAQRLAFHIINMPEEHVHHLAQTLVTAREKIRYCKY 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + ++ C IC +RD S I+VVE DL A E++ + +YHVL G+L+P GP Sbjct: 61 CCTLTDSEVCPICASTKRDHSTIMVVEHTQDLAAYEKTGQYHGVYHVLQGTLAPSLGKGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI + L ER+ +++ELI A +++++G+ TA YI K+K +K+TR+A G+P+G E Sbjct: 121 DDIRFKELEERLNNPEVKELILATNSSLDGEATAMYITKKVKPRGIKVTRIASGVPIGGE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLSRALDGRVEL 199 >gi|297625599|ref|YP_003687362.1| Recombination protein recR [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921364|emb|CBL55917.1| Recombination protein recR [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 208 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R L+ + + + LA + + LCSIC Sbjct: 1 MYDGPIQDLIDELGRLPGVGPKSAQRIAFWLLDQPQADVEQLANTLRTVKEGTHLCSICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV +D C IC D +RD S I VVE+ D+ A+ER++ LYHVLGGS+SP+D GP D Sbjct: 61 NVTDSDICRICRDPRRDHSSICVVEESKDVMAIERTREFRGLYHVLGGSISPIDGRGPGD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSEL 183 + I L+ R++ K+ E+I A +EG TA YI L + ++++RLA G+P+G +L Sbjct: 121 LRIAELVRRLQDPKVSEIILATDPNLEGDATATYISRLLGETPGIRVSRLASGLPVGGDL 180 Query: 184 DYLDDGTIFEAIRSRT 199 +Y D+ T+ A R Sbjct: 181 EYADEVTLGRAFSGRR 196 >gi|154495882|ref|ZP_02034578.1| hypothetical protein BACCAP_00162 [Bacteroides capillosus ATCC 29799] gi|150275080|gb|EDN02128.1| hypothetical protein BACCAP_00162 [Bacteroides capillosus ATCC 29799] Length = 200 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +E L++ ++PG G +SA+R +++ ++ A+A+ + + C + Sbjct: 1 MQYFPPALEKLVEQFHKLPGIGHKSAQRLAFYMLSLPDEDAAAFAQAITDAKRAISFCPV 60 Query: 63 CGNVDT-TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C N+ PCAIC +RD S + VV D D+ +ERS+ N LYHVL G +SP++ +G Sbjct: 61 CQNLTEGEGPCAICQSPKRDRSTVCVVADPKDVITMERSREYNGLYHVLHGVISPMNHVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+D+ I+SL+ER+ +++E+I A + EG+ TA Y+ LK VK+TRLAYGIP+GS Sbjct: 121 PDDLHIKSLVERVGSGEVKEVIMATNPDTEGEATAMYLSRLLKPFQVKVTRLAYGIPVGS 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 L++ DD T+ A+ R + Sbjct: 181 HLEFADDATLMRALEGRREM 200 >gi|323359077|ref|YP_004225473.1| recombinational DNA repair protein [Microbacterium testaceum StLB037] gi|323275448|dbj|BAJ75593.1| recombinational DNA repair protein [Microbacterium testaceum StLB037] Length = 197 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI R+PG GP+SA+R H+++ + L+ + I +KV C ICG Sbjct: 1 MYDGIVQDLIDEFGRLPGIGPKSAQRIAFHILQSPSFDVSRLSTLLGEIRDKVKFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C+IC D +R+A++I VVED D+ A+ER++ LYHVLGG++SP+ IGP+D Sbjct: 61 NVTEQERCSICRDPRRNATLICVVEDAKDVAAIERTREFRGLYHVLGGAISPIAGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + L++R+ ++E+I A + +EG+ TA Y+ L +++++TRLA G+P+G +L+ Sbjct: 121 LRVTQLMQRLADGTVQEVILATNPNLEGEATATYLSRLLHTLEIRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R L Sbjct: 181 YADEVTLGRAFEGRRTL 197 >gi|186684245|ref|YP_001867441.1| recombination protein RecR [Nostoc punctiforme PCC 73102] gi|186466697|gb|ACC82498.1| recombination protein RecR [Nostoc punctiforme PCC 73102] Length = 247 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG GP+SA+R LH++K+ E + LA+A+ ++ LCS+C Sbjct: 51 VYARPLARLIEQLQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIEAKKQIGLCSVCF 110 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + RD + I VV D D+ ALE+++ YHVLGG +SP+D IGPE Sbjct: 111 HLSAEPVCEICRNANRDNNTICVVADPRDVIALEKTREYKGKYHVLGGVISPIDGIGPEQ 170 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L R+ +K +E+I AIS ++EG+TT YI LK K+TR+A+G+P+G +L+ Sbjct: 171 LNILALQRRVNQQKPQEVILAISPSVEGETTTLYIGQLLKPF-TKVTRIAFGLPVGGDLE 229 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 230 YADEVTLARALEGRREL 246 >gi|311743400|ref|ZP_07717207.1| recombination protein R [Aeromicrobium marinum DSM 15272] gi|311313468|gb|EFQ83378.1| recombination protein R [Aeromicrobium marinum DSM 15272] Length = 204 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R HL+ + + A + + V C+ CG Sbjct: 1 MYDSVIQDLIDELGRLPGIGPKSAQRIAFHLLDADPEDVRRFASVLTEVKATVHFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RDA+V+ VVE+ D+ A+ER++ YHVLGG++SP+ IGP+ Sbjct: 61 NVTVDPECRICADPRRDATVLCVVEESKDVVAIERTREFRGRYHVLGGAISPIAGIGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R++ + E+I A +EG+ TA Y++ L + V +++LA G+P+G +L+ Sbjct: 121 LRIKELLGRLQDGVVTEVIIATDPNLEGEATATYLIRMLSTLGVAVSKLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A RT + Sbjct: 181 YADELTLGRAFEGRTSI 197 >gi|229829734|ref|ZP_04455803.1| hypothetical protein GCWU000342_01831 [Shuttleworthia satelles DSM 14600] gi|229791723|gb|EEP27837.1| hypothetical protein GCWU000342_01831 [Shuttleworthia satelles DSM 14600] Length = 199 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 118/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +EI LI L+R+PG G +SA+R H+++ ++ + L +++ + V C Sbjct: 1 MEYYSREISQLIGALSRLPGIGSKSAQRLAFHILRMPKEEVDQLGKSLMDARANVRFCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +R+ I+VVE DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CFTLTDQEICPICASDRRNHRQIMVVESTRDLAAYEKTGKYEGVYHVLHGAISPMQGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L R++ + + E+I A ++++EG+ TA YI +K +++TR+A G+P+G + Sbjct: 121 ADIRMKELFVRLQKEDVEEVIIATNSSLEGEATAMYISKLIKPTGIRVTRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLLRALDGRRDL 199 >gi|23336137|ref|ZP_00121364.1| COG0353: Recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum DJO10A] gi|23465089|ref|NP_695692.1| recombination protein RecR [Bifidobacterium longum NCC2705] gi|189440150|ref|YP_001955231.1| recombination protein RecR [Bifidobacterium longum DJO10A] gi|227545630|ref|ZP_03975679.1| recombination protein RecR [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622696|ref|ZP_04665727.1| recombination protein recR [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133495|ref|YP_004000834.1| recr [Bifidobacterium longum subsp. longum BBMN68] gi|317483359|ref|ZP_07942351.1| recombination protein RecR [Bifidobacterium sp. 12_1_47BFAA] gi|322688321|ref|YP_004208055.1| recombination protein RecR [Bifidobacterium longum subsp. infantis 157F] gi|322690331|ref|YP_004219901.1| recombination protein RecR [Bifidobacterium longum subsp. longum JCM 1217] gi|73621468|sp|Q8G6Y1|RECR_BIFLO RecName: Full=Recombination protein recR gi|229890128|sp|B3DUB4|RECR_BIFLD RecName: Full=Recombination protein recR gi|23325702|gb|AAN24328.1| recombination protein RecR [Bifidobacterium longum NCC2705] gi|189428585|gb|ACD98733.1| Recombinational DNA repair protein [Bifidobacterium longum DJO10A] gi|227213746|gb|EEI81585.1| recombination protein RecR [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514693|gb|EEQ54560.1| recombination protein recR [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517613|emb|CBK71229.1| DNA replication and repair protein RecR [Bifidobacterium longum subsp. longum F8] gi|311772737|gb|ADQ02225.1| RecR [Bifidobacterium longum subsp. longum BBMN68] gi|316915176|gb|EFV36606.1| recombination protein RecR [Bifidobacterium sp. 12_1_47BFAA] gi|320455187|dbj|BAJ65809.1| recombination protein RecR [Bifidobacterium longum subsp. longum JCM 1217] gi|320459657|dbj|BAJ70277.1| recombination protein RecR [Bifidobacterium longum subsp. infantis 157F] Length = 200 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI R+PG GP+ A+R +++ E LAEA+ + K+ C Sbjct: 1 MALAYDG-AIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV + PC +C D +RD SVI VVE+ D+ ++ER++ + LYHVLGG+++P+ + Sbjct: 60 DICGNVCESSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYHGLYHVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I L++R+E +++E+I A+ IEG+ T Y+ L+ + VK+TRLA G+P+G Sbjct: 120 GPADLRIPGLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S+L+Y D+ T+ A+ R Sbjct: 180 SDLEYADEITLGRALAGRRE 199 >gi|330722042|gb|EGG99965.1| Recombination protein RecR [gamma proteobacterium IMCC2047] Length = 199 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI L +PG GP+SA+R LHL+++ + LA+ +A +V C C Sbjct: 3 FSPLVDQLIDALRCLPGVGPKSAQRMALHLLERDREGAFRLAQKLAESIKEVGHCQQCRI 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T+ C IC D +RDA+ + VVE D+ A+E++ Y VL G LSP+D IGP+DI Sbjct: 63 LCETELCRICADPKRDAAKLCVVESPMDVMAIEQTNLFRGRYFVLMGHLSPIDGIGPQDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+E+++ ++ ELI A + T+EG+ TAHYI +L+ +V ITR+A+G+P+G EL++ Sbjct: 123 GIDLLVEQVKENQVEELIMATNPTVEGEATAHYIAAQLESPNVTITRIAHGVPLGGELEF 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A++ R L Sbjct: 183 VDGGTLAHALQGRQTL 198 >gi|283796872|ref|ZP_06346025.1| recombination protein RecR [Clostridium sp. M62/1] gi|291075278|gb|EFE12642.1| recombination protein RecR [Clostridium sp. M62/1] gi|295089889|emb|CBK75996.1| recombination protein RecR [Clostridium cf. saccharolyticum K10] Length = 199 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ + + L+ A+ + V C Sbjct: 1 MDYYSSQITKLIEELSKLPGIGSKSAQRLAFHIINMPAEQVERLSSAITDAKKNVRYCRE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +RD +I+VVE+ DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CFTLTDKELCPICESARRDHGIIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R++ +++RE+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 GDIKLKELMTRLQKEEVREVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 181 LEYIDEVTLLRALEGRTEL 199 >gi|284053205|ref|ZP_06383415.1| recombination protein RecR [Arthrospira platensis str. Paraca] gi|291567039|dbj|BAI89311.1| recombination protein RecR [Arthrospira platensis NIES-39] Length = 208 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ R+PG GP++A+R LH++K+ E+ + LA A+ +V LC +C Sbjct: 12 VYTRPLARLIEQFQRLPGIGPKTAQRLALHIIKRPEEEVQALARALLEAKKQVGLCQVCF 71 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + QRD I VV D D+ ALE+++ LYHVLGG +SP+D IGPE Sbjct: 72 HLSAEPVCEICRNPQRDRETICVVSDSRDVIALEKTREYRGLYHVLGGVISPMDGIGPEQ 131 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + +Q L+ R+ +K +E+I A++ ++EG+TT Y+ LK ++TR+A+G+P+G +L+ Sbjct: 132 LTVQPLVRRVSQQKFKEVIIAVNPSVEGETTTLYLGQLLKPF-TRVTRIAFGLPVGGDLE 190 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 191 YADEVTLARALEGRREL 207 >gi|119025156|ref|YP_909001.1| recombination protein RecR [Bifidobacterium adolescentis ATCC 15703] gi|166221925|sp|A0ZZN6|RECR_BIFAA RecName: Full=Recombination protein recR gi|118764740|dbj|BAF38919.1| recombination protein recR [Bifidobacterium adolescentis ATCC 15703] Length = 200 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + KV C Sbjct: 1 MALAYDG-AIQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PC +C D +RD SVI VVE+ D+ ++ER++ +YHVLGG ++P+ + Sbjct: 60 DICGNVCETSPCPVCADPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G Sbjct: 120 QPSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L+Y D+ T+ A+ R Sbjct: 180 GDLEYADEITLGRALAGRR 198 >gi|183602339|ref|ZP_02963706.1| recombination protein recR [Bifidobacterium animalis subsp. lactis HN019] gi|219682697|ref|YP_002469080.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis AD011] gi|241190273|ref|YP_002967667.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195679|ref|YP_002969234.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254790752|sp|B8DVK3|RECR_BIFA0 RecName: Full=Recombination protein recR gi|183218553|gb|EDT89197.1| recombination protein recR [Bifidobacterium animalis subsp. lactis HN019] gi|219620347|gb|ACL28504.1| recombination protein RecR [Bifidobacterium animalis subsp. lactis AD011] gi|240248665|gb|ACS45605.1| recombination protein recR [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250233|gb|ACS47172.1| recombination protein recR [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177990|gb|ADC85236.1| RecR [Bifidobacterium animalis subsp. lactis BB-12] gi|295793260|gb|ADG32795.1| recombination protein recR [Bifidobacterium animalis subsp. lactis V9] Length = 200 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +L++ + L +A+ + KV C Sbjct: 1 MALAYDG-AIQRLIDSFASLPGIGPKGAQRIAFYLLQAPDAESQRLVDAINEVKEKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGNV + PC IC D +RD I VVE+ D+ ++ER++ LY VLGG+++P+ + Sbjct: 60 EVCGNVCESSPCTICSDPRRDHGTICVVEEPKDVMSIERTREYRGLYQVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I L+ R+ +++E+I A++ IEG+ T Y+ L +D+K+TRLA G+P+G Sbjct: 120 GPSDLNIAQLLNRLHDGEVKEIIVALNPNIEGEATTTYLSRLLAPLDIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 +L+Y D+ T+ A+ R Sbjct: 180 GDLEYADEITLSRALEGRRE 199 >gi|299132606|ref|ZP_07025801.1| recombination protein RecR [Afipia sp. 1NLS2] gi|298592743|gb|EFI52943.1| recombination protein RecR [Afipia sp. 1NLS2] Length = 201 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 111/199 (55%), Positives = 151/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C Sbjct: 1 MASTVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMTPLASALQVAIERIQVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT +PC IC D +RD S+I+VV DVADLWALER+ A + YHVLG +LSPLD I Sbjct: 61 HTCGNIDTQNPCTICTDTRRDPSIIVVVADVADLWALERAAATHGRYHVLGATLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R + ++ E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G Sbjct: 121 GPQDLTIDALVARAQAPEVTEIILALNATVDGQTTAHYVTDMLQEAGVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|317120923|ref|YP_004100926.1| DNA replication and repair protein RecR [Thermaerobacter marianensis DSM 12885] gi|315590903|gb|ADU50199.1| DNA replication and repair protein RecR [Thermaerobacter marianensis DSM 12885] Length = 199 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 117/195 (60%), Gaps = 1/195 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 LI L ++PG GP++A+R HL+ + + + LAEAM V CSIC N+ Sbjct: 5 PAFARLIAELEKLPGIGPKTAQRLAYHLLFRPQDEVRALAEAMVQARASVRYCSICFNLT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC +C D RDA VI VVE D+ A+ER++ YHVL G +SP+D IGPE + + Sbjct: 65 DRDPCPVCRDPGRDARVICVVEQPRDVVAMERTREFRGRYHVLHGVISPMDGIGPEQLRV 124 Query: 128 QSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L+ R+ E+I A + T+EG+ TA Y+ +K + +++TR+A G+P G +L+Y+ Sbjct: 125 RELLARLRQDPPVDEVILATNPTVEGEATALYLARLIKPLGIRVTRIARGVPEGGDLEYV 184 Query: 187 DDGTIFEAIRSRTVL 201 D+ T+ A++ R L Sbjct: 185 DELTLTRALQGRQAL 199 >gi|222529136|ref|YP_002573018.1| recombination protein RecR [Caldicellulosiruptor bescii DSM 6725] gi|222455983|gb|ACM60245.1| recombination protein RecR [Caldicellulosiruptor bescii DSM 6725] Length = 201 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 122/201 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC Sbjct: 1 MKMQQKENAISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL Sbjct: 61 RVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G Sbjct: 121 YPEQLTIDVLLKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +++Y D+ TI +AI R + Sbjct: 181 GDIEYADEVTILKAIEGRREI 201 >gi|110636415|ref|YP_676623.1| recombination protein RecR [Mesorhizobium sp. BNC1] gi|123057246|sp|Q11AW7|RECR_MESSB RecName: Full=Recombination protein recR gi|110287399|gb|ABG65458.1| DNA replication and repair protein RecR [Chelativorans sp. BNC1] Length = 201 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 121/199 (60%), Positives = 162/199 (81%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I G EIE LI++LA++PG GPRSARRA LHL+KKKEQL PL AMA KV +C Sbjct: 1 MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLFSPLTTAMAEALAKVRVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVDT+DPC IC D +R+++ +IVVEDV+DLWALER+ A+NA YHVLGG+LSPLD + Sbjct: 61 SVCGNVDTSDPCTICTDPRRESATLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ RI + E+I A++AT+EGQ TAHYI D+L G++V++T+LA+G+P+G Sbjct: 121 GPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A++SRT Sbjct: 181 GELDYLDEGTLAAALKSRT 199 >gi|311897062|dbj|BAJ29470.1| putative recombination protein RecR [Kitasatospora setae KM-6054] Length = 199 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H+++ + LA A+ + KV C++CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQADPVDVRRLAHALQQVKEKVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C +C+D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEAERCRVCLDPRRDLAVICVVEESKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A +EG+ TA Y+ K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELMTRLADGTVTELILATDPNLEGEATATYLARLCKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|220911470|ref|YP_002486779.1| recombination protein RecR [Arthrobacter chlorophenolicus A6] gi|219858348|gb|ACL38690.1| recombination protein RecR [Arthrobacter chlorophenolicus A6] Length = 199 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 122/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ Q + L EA+ + ++V C++CG Sbjct: 1 MYEGAVQELIDELGRLPGVGPKSAQRLAFHILEADPQDMKRLVEAITTVKDRVKFCTVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD ++I VVE+ D+ A+ER+++ YHVLGG+++P+ IGPE Sbjct: 61 NVTEQELCNICRDPRRDPALICVVEESKDVLAVERTRSFRGRYHVLGGAINPIAGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I+E+I A +EG+ TA Y+ LK I + +TRLA G+P+G +L+ Sbjct: 121 LRIRELLTRLNDGAIQEVIIATDPNLEGEATATYLARMLKTIGIAVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|313835779|gb|EFS73493.1| recombination protein RecR [Propionibacterium acnes HL037PA2] gi|314928454|gb|EFS92285.1| recombination protein RecR [Propionibacterium acnes HL044PA1] gi|314970148|gb|EFT14246.1| recombination protein RecR [Propionibacterium acnes HL037PA3] gi|328906729|gb|EGG26501.1| putative recombination protein RecR [Propionibacterium sp. P08] Length = 201 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 117/194 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L+R+PG GP+ A+R H++ + + LA+A+ + K C +C Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPTEEINELADALREVKEKAKFCKVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG +SPLD GP D Sbjct: 61 NVSSDEVCQYCRDPRRDRSMICVVEESKDVIAVERTRQFRGLYHVLGGVISPLDGKGPAD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L +R+ + + E+I A + +EG+ TA Y+ + + V ++RLA G+P+G +L+ Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIGPMGVTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGR 194 >gi|154486524|ref|ZP_02027931.1| hypothetical protein BIFADO_00339 [Bifidobacterium adolescentis L2-32] gi|154084387|gb|EDN83432.1| hypothetical protein BIFADO_00339 [Bifidobacterium adolescentis L2-32] Length = 200 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + KV C Sbjct: 1 MALAYDG-AIQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PC +C+D +RD SVI VVE+ D+ ++ER++ +YHVLGG ++P+ + Sbjct: 60 DICGNVCETSPCPVCVDPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G Sbjct: 120 QPSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L+Y D+ T+ A+ R Sbjct: 180 GDLEYADEITLGRALAGRR 198 >gi|50954177|ref|YP_061465.1| recombination protein RecR [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648823|sp|Q6AGY5|RECR_LEIXX RecName: Full=Recombination protein recR gi|50950659|gb|AAT88360.1| recombination protein RecR [Leifsonia xyli subsp. xyli str. CTCB07] Length = 198 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 125/196 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C ICG Sbjct: 1 MYAGIVQELIDELGRLPGIGPKSAQRIAFHILQTEAFDVTRLAEVLLEVRDKVRFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C+IC D +RD ++I VVE+ D+ A+ER++ LYHVLGG++SP+D +GP+D Sbjct: 61 NVSEQATCSICRDPRRDPALICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ ++E+I A +EG+ TA Y+ L ++V++TRLA G+P+G +L+ Sbjct: 121 LRIRQLVQRLADGTVQEVIIATDPNLEGEATATYLSRLLTTLEVRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRRQ 196 >gi|113208301|dbj|BAF03507.1| recombinant protein [Streptomyces albulus] Length = 195 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 125/192 (65%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +++LI L R+PG GP+SA+R H+++ + + LA A+ + KV CS+CGNV Sbjct: 2 VQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLANALMEVKAKVRFCSVCGNVAQE 61 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C +C+D +RD +VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D+ I+ Sbjct: 62 EQCRVCLDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRE 121 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ + ELI A +EG+ TA Y+ +K + +++TRLA G+P+G +L+Y D+ Sbjct: 122 LLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEV 181 Query: 190 TIFEAIRSRTVL 201 T+ A R +L Sbjct: 182 TLGRAFEGRRLL 193 >gi|316932086|ref|YP_004107068.1| recombination protein RecR [Rhodopseudomonas palustris DX-1] gi|315599800|gb|ADU42335.1| recombination protein RecR [Rhodopseudomonas palustris DX-1] Length = 201 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 109/199 (54%), Positives = 153/199 (76%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PL+ A+ +K+ +C Sbjct: 1 MASSVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMAPLSAALQVAIDKIQVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + CGN+DT +PC +C D +RD+S+I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 61 TTCGNIDTQNPCTVCTDPRRDSSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L++R + E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G Sbjct: 121 GPDDLTIDALVKRAHDPGVAEIILALNATVDGQTTAHYVTDLLQDAGVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|317126766|ref|YP_004093048.1| recombination protein RecR [Bacillus cellulosilyticus DSM 2522] gi|315471714|gb|ADU28317.1| recombination protein RecR [Bacillus cellulosilyticus DSM 2522] Length = 198 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ R+PG GP++A R +++ +E + A+A+ N ++ CS+C + Sbjct: 3 YPQPISKLIEGFMRLPGIGPKTAARLAFYVLDMREDDVLDFAKALVNAKRQLTYCSVCHH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD +V+ VV++ D+ A+E+ K LYHVL G +SP+D IGPEDI Sbjct: 63 ITDIDPCRICEDNGRDQTVLCVVQESKDVIAMEKMKEYTGLYHVLHGCISPVDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ I+E+I A + IEG+ TA YI +K +K+TR+A+G+P+G +L+Y Sbjct: 123 YIPDLLKRLQDDTIQEVIIATNPNIEGEATAMYISRLIKPTGLKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +AI R + Sbjct: 183 ADEVTLSKAIEGRREI 198 >gi|209522777|ref|ZP_03271335.1| recombination protein RecR [Arthrospira maxima CS-328] gi|209496826|gb|EDZ97123.1| recombination protein RecR [Arthrospira maxima CS-328] Length = 208 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ R+PG GP++A+R LH++K+ E+ + LA A+ +V LC +C Sbjct: 12 VYTRPLARLIEQFQRLPGIGPKTAQRLALHIIKRPEEEVQALARALLEAKKQVGLCQVCF 71 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + QRD I VV D D+ ALE+++ LYHVLGG +SP+D IGPE Sbjct: 72 HLSAEPVCEICRNPQRDRETICVVSDSRDVIALEKTREYRGLYHVLGGVISPMDGIGPEQ 131 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + +Q L+ R+ ++++E+I A++ ++EG+TT Y+ LK ++TR+A+G+P+G +L+ Sbjct: 132 LTVQPLVRRVSQQQVKEVIIAVNPSVEGETTTLYLGQLLKPF-TRVTRIAFGLPVGGDLE 190 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 191 YADEVTLARALEGRREL 207 >gi|312622613|ref|YP_004024226.1| recombination protein recr [Caldicellulosiruptor kronotskyensis 2002] gi|312203080|gb|ADQ46407.1| recombination protein RecR [Caldicellulosiruptor kronotskyensis 2002] Length = 201 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 122/201 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC Sbjct: 1 MKMQQKENAISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL Sbjct: 61 RVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G Sbjct: 121 YPEQLTIDVLMKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +++Y D+ TI +AI R + Sbjct: 181 GDIEYADEVTILKAIEGRREI 201 >gi|308176116|ref|YP_003915522.1| recombination protein recR [Arthrobacter arilaitensis Re117] gi|307743579|emb|CBT74551.1| recombination protein recR [Arthrobacter arilaitensis Re117] Length = 270 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 119/195 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H++ + + LA ++ + KV C IC Sbjct: 1 MYEGAVQELIDELGRLPGIGPKSAQRIAFHILDADAEDMTRLAASIQLVKEKVKFCEICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + CAIC D++RD + I +VE+ D+ A+ER++A + YHVLGGS++PL IGPE Sbjct: 61 NISEQEICAICRDERRDGTKICIVEESKDVLAIERTRAFSGKYHVLGGSINPLAGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I ELI A +EG+ TA Y++ L + + ITRLA G+P+G +L+ Sbjct: 121 LHIRELVTRLADDSITELILATDPNLEGEATAVYLVRALAPLGIHITRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLARAFEGRR 195 >gi|291548742|emb|CBL25004.1| recombination protein RecR [Ruminococcus torques L2-14] Length = 198 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ +R+PG G +SA+R H++ + + LA A+ + V C Sbjct: 1 MDYYSNQISRLIEEFSRLPGIGNKSAQRLAFHVINMPVEQVEGLANAIVDARKNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDKDICPICSNPDRDHKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA YI +K + +K++R+A G+P+G + Sbjct: 121 GDIRLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPVGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|291546692|emb|CBL19800.1| recombination protein RecR [Ruminococcus sp. SR1/5] Length = 198 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ L+ +PG G +SA+R H++ + + L ++ + V C Sbjct: 1 MEYYSSHINKLIEQLSHLPGIGAKSAQRLAFHIMNMPKDQVEQLTASITDARQNVQYCKC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +RD S I+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CYTLTDQELCPICANPKRDHSTIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L++R+ ++E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 DDIKLKELMKRL-QGDVKEVIVATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 180 LEYIDEVTLLRALEGRVEL 198 >gi|271970478|ref|YP_003344674.1| recombination protein RecR [Streptosporangium roseum DSM 43021] gi|270513653|gb|ACZ91931.1| recombination protein RecR [Streptosporangium roseum DSM 43021] Length = 199 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L +PG GP+SA+R HL+ + + LA A+ + KV C +CG Sbjct: 1 MYEGVVQNLIDELGMLPGVGPKSAQRIAFHLLAAEPTDVKRLAHALLEVKEKVRFCRVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD VI VVE+ D+ A+E+++ YHVLGG++SP+D +GP+D Sbjct: 61 NVAAEEECRICRDVRRDPHVICVVEESKDVVAIEKTREFRGRYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++ ELI A +EG+ TA Y+ +K + +K+TRLA G+P+G +L+ Sbjct: 121 LRIRELMTRLADGQVTELILATDPNLEGEATATYLARLVKPMGLKVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 181 YADEVTLGRAFEGRRLL 197 >gi|313902765|ref|ZP_07836162.1| DNA replication and repair protein RecR [Thermaerobacter subterraneus DSM 13965] gi|313466885|gb|EFR62402.1| DNA replication and repair protein RecR [Thermaerobacter subterraneus DSM 13965] Length = 199 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 117/195 (60%), Gaps = 1/195 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 LI L ++PG GP++A+R HL+ + ++ + LAEAM V CS+C N+ Sbjct: 5 PAFARLIAELEKLPGIGPKTAQRLAYHLLFRPQEEVRALAEAMVQARASVRYCSVCANLT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC +C D RD VI VVE D+ A+ER++ YHVL G +SP+D +GPE + + Sbjct: 65 DRDPCPVCRDPGRDPRVICVVEQPRDVVAMERTREFRGRYHVLHGVISPMDGVGPEQLRV 124 Query: 128 QSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L+ R+ E+I A + T+EG+ TA Y+ +K + +++TR+A G+P G +L+Y+ Sbjct: 125 RELLARLRQDPPVEEVILATNPTVEGEATALYLARLIKPLGIRVTRIARGVPEGGDLEYV 184 Query: 187 DDGTIFEAIRSRTVL 201 D+ T+ A++ R L Sbjct: 185 DELTLTRALQGRQAL 199 >gi|92116085|ref|YP_575814.1| recombination protein RecR [Nitrobacter hamburgensis X14] gi|122418734|sp|Q1QQZ3|RECR_NITHX RecName: Full=Recombination protein recR gi|91798979|gb|ABE61354.1| recombination protein RecR [Nitrobacter hamburgensis X14] Length = 200 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 110/200 (55%), Positives = 151/200 (75%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EI+ LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C Sbjct: 1 MAS-VAGPEIDRLIQLLARLPGLGPRSARRAALHLIKKREALMTPLASALQVAIDRIQIC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN+DT PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 60 EICGNIDTRSPCTVCTDMRRDPSIIVVVADVADLWALERAGATNGFYHVLGATLSPLDGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G Sbjct: 120 GPQDLTIDALVSRAHDPRVTEIVLALNATVDGQTTAHYITDLLGEANVKVTRLAHGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ A+R RT Sbjct: 180 GELDYLDEGTLSAAMRQRTP 199 >gi|331092481|ref|ZP_08341304.1| recombination protein recR [Lachnospiraceae bacterium 2_1_46FAA] gi|330400984|gb|EGG80584.1| recombination protein recR [Lachnospiraceae bacterium 2_1_46FAA] Length = 198 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 119/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+R+PG G +SA+R H++ ++ + +A AM N V CS Sbjct: 1 MDYYSSQISKLIEELSRLPGIGAKSAQRLAFHIIHMPKEQVEQMANAMVEARNNVRYCSK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D RD I+VVE DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CYTLTDREVCPICSDDSRDEKTIMVVETTRDLVAYEKTGKYRGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIKLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|327329178|gb|EGE70938.1| recombination protein RecR [Propionibacterium acnes HL103PA1] Length = 201 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 116/194 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L+R+PG GP+ A+R H++ + LA+A+ + K C IC Sbjct: 1 MYDGPLQELIDALSRLPGIGPKGAQRIAFHILDAPAEEANELADALREVKEKAKFCKICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + + C C D +RD S+I VVE+ D+ A+ER++ LYHVLGG++SPLD GP D Sbjct: 61 NVSSDEVCQYCRDPRRDQSMICVVEESKDVIAVERTRQFRGLYHVLGGAISPLDGKGPAD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L +R+ + + E+I A + +EG+ TA Y+ + + ++RLA G+P+G +L+ Sbjct: 121 LHIRELCQRLADETVTEVILATNPNLEGEATATYLSRLIAPMGATVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGR 194 >gi|255658594|ref|ZP_05404003.1| recombination protein RecR [Mitsuokella multacida DSM 20544] gi|260849401|gb|EEX69408.1| recombination protein RecR [Mitsuokella multacida DSM 20544] Length = 198 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 118/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + NLI+ +PG G ++A R H++ LA A+ + K+ C+ C N+ Sbjct: 6 PLANLIEHFRALPGIGQKTAVRLAYHVLDMDPAQARALASAIIDAKEKIGYCNTCFNLSD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 +PCAIC +RD SVI VVE D+ A+ER + +YHVL G+LSPL+ IGP DI I+ Sbjct: 66 QNPCAICASDERDHSVICVVEQPQDVAAMERMRDYQGVYHVLHGALSPLEGIGPSDIRIK 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R++ ++E+I A + +EG+ T YI LK + +K+TR+A+G+P+G +L+Y D+ Sbjct: 126 ELLGRLQDDTVKEVIMATNPNVEGEATTMYIAKLLKPLGIKVTRIAHGLPIGGDLEYADE 185 Query: 189 GTIFEAIRSRTVL 201 T+ +A+ +R + Sbjct: 186 VTLAKAMENRREI 198 >gi|153813527|ref|ZP_01966195.1| hypothetical protein RUMOBE_03949 [Ruminococcus obeum ATCC 29174] gi|149830398|gb|EDM85490.1| hypothetical protein RUMOBE_03949 [Ruminococcus obeum ATCC 29174] Length = 199 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ L+ +PG GP+SA+R H++ + + L ++ K+ C Sbjct: 1 MEYYSTHINKLIEQLSHLPGIGPKSAQRLAFHIMNMPKDQVEQLTSSITGAREKIRYCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +RDAS I+VVE+ DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CCTLTDQELCPICSNPKRDASTIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L++R++ + I+E+I A ++++EG+TTA YI +K ++++R+A G+P+G + Sbjct: 121 DDIRLKELMKRLQTEDIKEVIIATNSSLEGETTAMYISKLIKPTGIRVSRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 181 LEYIDEVTLLRALEGRVDL 199 >gi|172056064|ref|YP_001812524.1| recombination protein RecR [Exiguobacterium sibiricum 255-15] gi|229890150|sp|B1YGD0|RECR_EXIS2 RecName: Full=Recombination protein recR gi|171988585|gb|ACB59507.1| recombination protein RecR [Exiguobacterium sibiricum 255-15] Length = 199 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG GP++A R H++ +E + +A+ + + CSICGN Sbjct: 3 YPEAISRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLMFGKALVSAKRDISYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC +C D+ R+ +++ VV+D D+ A+E+ + LYHVL G++SP++ IGPEDI Sbjct: 63 ITDKDPCYVCSDKHRNRTIVCVVQDSRDVIAMEKMRDYQGLYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + SL+ R++ + I E+I A + IEG+ TA Y+ LK +++TR+A+G+P+G +L+ Sbjct: 123 NVSSLLTRLQADEAITEIILATNPNIEGEATAMYLSRLLKPTGIRVTRIAHGLPVGGDLE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 183 YADEVTLSRAMEGRREL 199 >gi|317123594|ref|YP_004097706.1| DNA replication and repair protein RecR [Intrasporangium calvum DSM 43043] gi|315587682|gb|ADU46979.1| DNA replication and repair protein RecR [Intrasporangium calvum DSM 43043] Length = 199 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 120/195 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+ A+R HL++ + L A+ + +V C +CG Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKGAQRIAFHLLQADSDDVSRLVTALTEVKARVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD + I VVE+ D+ A+ER++ YHVLGG++SP+D IGP+D Sbjct: 61 NVAEAERCRICADSRRDHTAICVVEEPKDIVAIERTREFRGTYHVLGGAISPIDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L++R+ +++E+I A +EG+ TA Y+ L+ + + +TRLA G+P+G +L+ Sbjct: 121 LRVRELMQRLASGEVQEVIIATDPNLEGEATATYLSRLLRDVGLTVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|292669038|ref|ZP_06602464.1| recombination protein R [Selenomonas noxia ATCC 43541] gi|292649293|gb|EFF67265.1| recombination protein R [Selenomonas noxia ATCC 43541] Length = 198 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 118/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ +PG G ++A R H++ + LA A+ K+ CS C N+ Sbjct: 6 PLTQLIEQFRTLPGIGAKTAARLAYHVLDMDMERARRLASAIVEAKEKIGFCSTCFNLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 +DPCAIC+ ++RD ++I VVE D+ A+ER + +YHVL G+LSP++ IGP DI I+ Sbjct: 66 SDPCAICMAEKRDHTMICVVEQPPDVAAMERMNDYDGVYHVLHGALSPIEGIGPNDIRIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ + E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+ Sbjct: 126 ELVTRVGTTDVEEVIVATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADE 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 186 VTLSRAMENRREI 198 >gi|254470668|ref|ZP_05084071.1| recombination protein RecR [Pseudovibrio sp. JE062] gi|211959810|gb|EEA95007.1| recombination protein RecR [Pseudovibrio sp. JE062] Length = 203 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 124/202 (61%), Positives = 163/202 (80%), Gaps = 2/202 (0%) Query: 1 MQ-KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M +++ G EIE LI++LA++PG GPRSARRA LHLV+KK+QLL PLAEAM ++V + Sbjct: 1 MSTRRVAGPEIERLIQLLAKLPGLGPRSARRAALHLVQKKDQLLIPLAEAMGVAVDQVGI 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS CG VDT+DPC IC D +RD S I+VVEDV+DLWALER+ AV+A YHVLGG+LSPLD Sbjct: 61 CSECGTVDTSDPCTICSDPRRDGSTIVVVEDVSDLWALERASAVSAHYHVLGGTLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIP 178 IGP+D+ I LIER+E + E+I A++AT+EGQTTAH+I D+L +VK+TRLA+G+P Sbjct: 121 IGPDDLNISKLIERVESGGVNEVILAVNATVEGQTTAHFITDQLARFENVKVTRLAHGVP 180 Query: 179 MGSELDYLDDGTIFEAIRSRTV 200 +G ELDYLD+GT+ +A+R+RT Sbjct: 181 VGGELDYLDEGTLAQALRARTK 202 >gi|115526799|ref|YP_783710.1| recombination protein RecR [Rhodopseudomonas palustris BisA53] gi|122294450|sp|Q07H54|RECR_RHOP5 RecName: Full=Recombination protein recR gi|115520746|gb|ABJ08730.1| recombination protein RecR [Rhodopseudomonas palustris BisA53] Length = 201 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 108/199 (54%), Positives = 150/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++L+R+PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C Sbjct: 1 MATAVAGPEIERLIQLLSRLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT +PC +C D +RD ++I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 61 KTCGNIDTQNPCTVCTDPRRDPAIIVVVADVADLWALERAHASNGRYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L +VK+TRLA+G+P+G Sbjct: 121 GPQDLTIDALVARAHDPQVSEIVLALNATVDGQTTAHYITDLLMEANVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|261338426|ref|ZP_05966310.1| recombination protein RecR [Bifidobacterium gallicum DSM 20093] gi|270276402|gb|EFA22256.1| recombination protein RecR [Bifidobacterium gallicum DSM 20093] Length = 200 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R HL+ ++ LA+A+ + +KV C Sbjct: 1 MALAYDG-AIQRLIDAFASLPGIGPKGAQRIAFHLLSASDEEAQRLADAIEEVKHKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PCAIC D +RD ++I VVE+ D+ ++ER++ LYHVLGG+++P+ I Sbjct: 60 EICGNVCETSPCAICSDPRRDHTMICVVEEPKDVMSIERTREYRGLYHVLGGTINPMANI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I +L++R++ + E+I A++ IEG+ T Y+ L +++K+TRLA G+P+G Sbjct: 120 GPNDLAIPALLDRLKDDSVTEVIVALNPNIEGEATTTYLSRLLSPLEIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 ++L+Y D+ T+ A+ R Sbjct: 180 ADLEYADEITLSRALMGRR 198 >gi|328541813|ref|YP_004301922.1| Recombination protein RecR [polymorphum gilvum SL003B-26A1] gi|326411565|gb|ADZ68628.1| Recombination protein RecR [Polymorphum gilvum SL003B-26A1] Length = 202 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 124/200 (62%), Positives = 161/200 (80%), Gaps = 1/200 (0%) Query: 1 MQKK-ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + G EIE LI++LA++PG GPRSARRA LHL+KKKEQLL PLAEAM +V + Sbjct: 1 MSNRRVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKEQLLVPLAEAMGVAVERVGI 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS CG VDT+DPC IC D RD SV++VVEDV+DLWALER+ +NA YHVLGG+LSPLD Sbjct: 61 CSTCGTVDTSDPCTICADPGRDDSVLVVVEDVSDLWALERAAVLNARYHVLGGTLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGPED+ I +L+ER+ IRE+I A++AT+EGQTTAHY+ +L G+DV +TRLA+G+P+ Sbjct: 121 IGPEDLSIAALVERVRAGTIREVILAVNATVEGQTTAHYVTGQLAGLDVTVTRLAHGVPV 180 Query: 180 GSELDYLDDGTIFEAIRSRT 199 G ELDYLD+GT+ +A+++RT Sbjct: 181 GGELDYLDEGTLAQALKART 200 >gi|206901227|ref|YP_002251790.1| recombination protein RecR [Dictyoglomus thermophilum H-6-12] gi|206740330|gb|ACI19388.1| recombination protein RecR [Dictyoglomus thermophilum H-6-12] Length = 200 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 86/198 (43%), Positives = 128/198 (64%), Gaps = 1/198 (0%) Query: 5 ITGKEI-ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 + K I E LI L +IPG GP+SA+R +L+K+ ++ + LA + + ++ CSIC Sbjct: 1 MAEKSIFEKLIDELTKIPGIGPKSAQRIAFYLLKQPQESVESLANTILKVKKEIKHCSIC 60 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 N+ DPC IC + +RD + I VV + DLWA+E++ N +YHVLGG +SPLD + PE Sbjct: 61 FNITEKDPCEICSNPERDKTTICVVAEPKDLWAIEKTSKFNGVYHVLGGLISPLDGVFPE 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 D+ I+ LIER++ +I+E+I A +T EG+ TA YI L VK+TRLA+G+P G+EL Sbjct: 121 DLRIKELIERVKKGEIKEVILATDSTPEGEATAMYIARLLMEYPVKVTRLAHGLPAGTEL 180 Query: 184 DYLDDGTIFEAIRSRTVL 201 D+ D+ T+ A+ R L Sbjct: 181 DFADEITLIHALEGRKEL 198 >gi|224283525|ref|ZP_03646847.1| recombination protein RecR [Bifidobacterium bifidum NCIMB 41171] gi|310288214|ref|YP_003939473.1| recombination protein RecR [Bifidobacterium bifidum S17] gi|311065081|ref|YP_003971807.1| Recombination protein RecR [Bifidobacterium bifidum PRL2010] gi|313140681|ref|ZP_07802874.1| recombination protein recR [Bifidobacterium bifidum NCIMB 41171] gi|309252151|gb|ADO53899.1| recombination protein RecR [Bifidobacterium bifidum S17] gi|310867401|gb|ADP36770.1| RecR Recombination protein [Bifidobacterium bifidum PRL2010] gi|313133191|gb|EFR50808.1| recombination protein recR [Bifidobacterium bifidum NCIMB 41171] Length = 200 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 121/200 (60%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +L+ ++ G L +A+ + KV C Sbjct: 1 MALAYDG-AIQRLIDAFAGLPGIGPKGAQRIAFYLLSASDEETGKLVDAITEVKEKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV PC +C D +RD VI VVE+ D+ ++ER++ YHVLGG+++P+ + Sbjct: 60 DICGNVCEVSPCPVCADPRRDHGVICVVEEPKDVMSIERTREYRGQYHVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I L++R++ +++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G Sbjct: 120 GPADLNIPKLLDRLKTDEVKEVILALDPNIEGEATTTYLSRLLSPLGIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S+L+Y D+ T+ A+ R Sbjct: 180 SDLEYADEVTLGRALTGRRE 199 >gi|210616980|ref|ZP_03291315.1| hypothetical protein CLONEX_03537 [Clostridium nexile DSM 1787] gi|210149503|gb|EEA80512.1| hypothetical protein CLONEX_03537 [Clostridium nexile DSM 1787] Length = 198 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+R+PG G +SA+R H++ ++ + LA +M V C Sbjct: 1 MDYYSSQISKLIEELSRLPGIGAKSAQRLAFHIINMPKEQVQSLAGSMTEARENVRYCKQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + RDA I+VVE DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CHTLTDQELCPICSNSNRDAKTIMVVETTRDLAAYEKTGKYQGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIKLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT + Sbjct: 180 LEYIDEVTLLRALEGRTEI 198 >gi|269217438|ref|ZP_06161292.1| recombination protein RecR [Actinomyces sp. oral taxon 848 str. F0332] gi|269213164|gb|EEZ79504.1| recombination protein RecR [Actinomyces sp. oral taxon 848 str. F0332] Length = 298 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 119/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI L R+PG GP+SA+R H++ + + + LA A+ + KV C ICGNV Sbjct: 8 AVQELIDELGRLPGVGPKSAQRIAFHVLAEDPEEVKALASALLRVKEKVRFCEICGNVTE 67 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C+IC D +R SVI VVE+ D+ A+ER++ YHVLGGS++P+ +GP+D+ I+ Sbjct: 68 AEVCSICTDPRRMDSVICVVEESKDIVAIERTREYRGRYHVLGGSINPIQGVGPDDLRIR 127 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ + E+I A IEG+ TA Y++ L I V ++RLA G+P+G +L+Y D+ Sbjct: 128 ELISRLSDGAVAEVIIATDPNIEGEATAAYLIRILSSIGVAVSRLASGLPVGGDLEYADE 187 Query: 189 GTIFEAIRSRTVL 201 T+ A R + Sbjct: 188 ITLSRAFEGRQRI 200 >gi|300024233|ref|YP_003756844.1| recombination protein RecR [Hyphomicrobium denitrificans ATCC 51888] gi|299526054|gb|ADJ24523.1| recombination protein RecR [Hyphomicrobium denitrificans ATCC 51888] Length = 201 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 106/201 (52%), Positives = 151/201 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +KI G EIE L+++L+R+PG GPRSAR+A L L+K++ LL PL++A+ K+ C Sbjct: 1 MSRKIAGPEIERLVQLLSRLPGLGPRSARKAVLSLLKRRNDLLLPLSDALQQAVEKISEC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGN+DT PC++C D +RD S+I+VVE+V DLWALER+ V+A YHVLGG LSPLD I Sbjct: 61 PVCGNLDTVSPCSVCSDPRRDQSLIVVVEEVGDLWALERANIVSARYHVLGGHLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + + +L+ R +++E++ A++AT+EGQ+TAHYI D+L DV ++RLA G+P+G Sbjct: 121 GPEQLNVANLLARAAASEVKEILLALNATVEGQSTAHYISDQLAATDVTVSRLAQGVPIG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A ++R L Sbjct: 181 GELDYLDDGTLAAAFKARRKL 201 >gi|312793325|ref|YP_004026248.1| recombination protein recr [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877253|ref|ZP_07737221.1| recombination protein RecR [Caldicellulosiruptor lactoaceticus 6A] gi|311795967|gb|EFR12328.1| recombination protein RecR [Caldicellulosiruptor lactoaceticus 6A] gi|312180465|gb|ADQ40635.1| recombination protein RecR [Caldicellulosiruptor kristjanssonii 177R1B] Length = 199 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 124/201 (61%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQ+K I LI+ L ++PG G ++A+R H++ K + + LA+A+ + LC Sbjct: 1 MQQKENS--ISKLIQQLEKLPGIGQKTAQRLAFHIINMKTEDVKALADAILSAKTSTKLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N + C+IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL Sbjct: 59 KVCCNFTEDEVCSICKDEKRDRSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L++R+ +++E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G Sbjct: 119 YPEQLTIDVLMKRLSDPQVKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +++Y D+ TI +AI R + Sbjct: 179 GDIEYADEVTILKAIEGRREI 199 >gi|297582362|ref|YP_003698142.1| recombination protein RecR [Bacillus selenitireducens MLS10] gi|297140819|gb|ADH97576.1| recombination protein RecR [Bacillus selenitireducens MLS10] Length = 198 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ ++PG GP++A R +++ E + A+A+ N ++ CS+C + Sbjct: 3 YPQPVTKLIEGFMKLPGIGPKTAARLAFYVLDMNEDDVLDFAKALVNAKRELTYCSVCHH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC DQ RD S+I VV+D D+ A+E+ + +YHVL G++SP+D IGPEDI Sbjct: 63 ITDTDPCRICDDQSRDRSIICVVQDAKDVIAMEKMREYTGMYHVLHGAISPVDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ + ++ELI A + IEG+ TA YI +K +K+TR+A+G+P+G +L+Y Sbjct: 123 FIPDLLKRLQDETVQELIIATNPNIEGEATAMYISRLVKPTGMKVTRIAHGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI R L Sbjct: 183 ADEMTLSRAIEGRREL 198 >gi|258510127|ref|YP_003183561.1| recombination protein RecR [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476853|gb|ACV57172.1| recombination protein RecR [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 199 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + I+ ++PG GP++A R H+++ E + A+A+ ++ + C++C N Sbjct: 4 YPEPVARAIEHFMKLPGVGPKTAARLAFHVLEMSEADVKAFAKALIDLKTGLTECAVCCN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + PCAIC D +RD VI VV++ D+ A+ER++ + LYHVL G++SP++ +GP+DI Sbjct: 64 ITEASPCAICRDPRRDRRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGPQDI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ +I E+I A + +EG+ TA YI LK VK+TR+A+G+P+G +L+Y Sbjct: 124 RIRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQVKLTRIAHGLPVGGDLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 184 ADEVTLAKALEGRRAL 199 >gi|291455831|ref|ZP_06595221.1| recombination protein RecR [Bifidobacterium breve DSM 20213] gi|291382759|gb|EFE90277.1| recombination protein RecR [Bifidobacterium breve DSM 20213] Length = 200 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI +PG GP+ A+R +++ E LAEA+ + KV C Sbjct: 1 MALAYDG-AIQRLIDAFGHLPGIGPKGAQRIAFYMLSAPEDEARELAEAIEEVKAKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ + Sbjct: 60 EICGNVCETSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I L++R+E +++E+I A+ IEG+ T Y+ L+ + VKITRLA G+P+G Sbjct: 120 GPADLRIPGLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKITRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S+L+Y D+ T+ A+ R Sbjct: 180 SDLEYADEITLGRALAGRRE 199 >gi|218289070|ref|ZP_03493307.1| recombination protein RecR [Alicyclobacillus acidocaldarius LAA1] gi|218240895|gb|EED08073.1| recombination protein RecR [Alicyclobacillus acidocaldarius LAA1] Length = 199 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + I+ ++PG GP++A R H+++ E + A+A+ ++ + C++C N Sbjct: 4 YPEPVARAIEHFMKLPGVGPKTAARLAFHVLEMSEADVRAFAKALIDLKTGLTECAVCCN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + PCAIC D +RD VI VV++ D+ A+ER++ + LYHVL G++SP++ +GP+DI Sbjct: 64 ITEASPCAICRDPRRDQRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGPQDI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ +I E+I A + +EG+ TA YI LK VK+TR+A+G+P+G +L+Y Sbjct: 124 RIRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQVKLTRIAHGLPVGGDLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 184 ADEVTLAKALEGRRAL 199 >gi|166033192|ref|ZP_02236021.1| hypothetical protein DORFOR_02914 [Dorea formicigenerans ATCC 27755] gi|166027549|gb|EDR46306.1| hypothetical protein DORFOR_02914 [Dorea formicigenerans ATCC 27755] Length = 198 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI L+R+PG G +SA R HL+ ++ + LA+ M V C Sbjct: 1 MDYYSNQISKLIDELSRLPGIGAKSASRLAFHLIHMPKEEVKRLADTMVEARENVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDQELCPICSNLNRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ LI R+ + E+I A ++++EG+TTA YI +K VK++R+A G+P+G + Sbjct: 121 GDIKLKELIRRL-EGDVEEVIIATNSSLEGETTAMYISKLIKPTGVKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTQL 198 >gi|160936874|ref|ZP_02084238.1| hypothetical protein CLOBOL_01762 [Clostridium bolteae ATCC BAA-613] gi|158440064|gb|EDP17811.1| hypothetical protein CLOBOL_01762 [Clostridium bolteae ATCC BAA-613] Length = 198 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ ++ + LA AM N V C Sbjct: 1 MDYYSSQITKLIEELSKLPGVGAKSAQRLAFHIINMPKEQVEELAGAMTGARNNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDKELCPICSSDRRNHKTIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 GDIKLKELMQRL-QSDVEEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|320529758|ref|ZP_08030836.1| recombination protein RecR [Selenomonas artemidis F0399] gi|320137997|gb|EFW29901.1| recombination protein RecR [Selenomonas artemidis F0399] Length = 198 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 118/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L++ +PG G ++A R H++ + LA A+ K+ CS C N+ Sbjct: 6 PLTQLMEQFRALPGIGAKTAARLAYHVLDMDMERAQRLASAIVEAKRKIGFCSTCFNLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 TDPCAIC ++RD SV+ VVE D+ A+ER + +YHVL G+LSPL+ +GP D+ I+ Sbjct: 66 TDPCAICTAEKRDHSVVCVVEQPPDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDLRIK 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ ++E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+ Sbjct: 126 ELVTRVGTTDVQEVIMATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADE 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 186 VTLSRAMENRREI 198 >gi|283458782|ref|YP_003363424.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18] gi|283134839|dbj|BAI65604.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18] Length = 384 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R H++ + LA A++ + V C CG Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV T C IC D++RD SV+ VVE+ D+ A+ER+++ YHVLGG+++PL +GPE Sbjct: 61 NVSETKLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + V+++RLA G+P+G +L+ Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R V+ Sbjct: 181 YADEITLGRALEGRRVI 197 >gi|255327657|ref|ZP_05368723.1| recombination protein RecR [Rothia mucilaginosa ATCC 25296] gi|255295331|gb|EET74682.1| recombination protein RecR [Rothia mucilaginosa ATCC 25296] Length = 380 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R H++ + LA A++ + V C CG Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV T C IC D++RD SV+ VVE+ D+ A+ER+++ YHVLGG+++PL +GPE Sbjct: 61 NVSETKLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + V+++RLA G+P+G +L+ Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R V+ Sbjct: 181 YADEITLGRALEGRRVI 197 >gi|182677253|ref|YP_001831399.1| recombination protein RecR [Beijerinckia indica subsp. indica ATCC 9039] gi|254790751|sp|B2ICM1|RECR_BEII9 RecName: Full=Recombination protein recR gi|182633136|gb|ACB93910.1| recombination protein RecR [Beijerinckia indica subsp. indica ATCC 9039] Length = 201 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 123/199 (61%), Positives = 157/199 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M I G EIE LI +LAR+PG GPRSARRA LHL++K+ +LLGPLAEA+ YN + C Sbjct: 1 MTAPIAGPEIERLIHLLARLPGLGPRSARRAALHLIRKRTELLGPLAEALQQAYNHLIPC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN+DT DPC IC D +RD ++++VVE VADLWALER+ A+ A YHVLGG+LSPLD + Sbjct: 61 QICGNIDTRDPCTICADAKRDPTLLVVVETVADLWALERAAALPARYHVLGGTLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ +QSL ER+ +IRE+I A++AT++GQTTAHYI D L VKITRLA+G+P+G Sbjct: 121 GPKDLNLQSLTERVAQGEIREVILAVNATVDGQTTAHYITDSLAAFPVKITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+RSRT Sbjct: 181 GELDYLDEGTLAAALRSRT 199 >gi|313895449|ref|ZP_07829006.1| recombination protein RecR [Selenomonas sp. oral taxon 137 str. F0430] gi|312976344|gb|EFR41802.1| recombination protein RecR [Selenomonas sp. oral taxon 137 str. F0430] Length = 198 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 117/193 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L++ +PG G ++A R H++ + LA A+ K+ CS C N+ Sbjct: 6 PLTQLMEQFRALPGIGAKTAARLAYHVLDMDMERAQRLASAIVEAKRKIGFCSTCFNLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 TDPC IC ++RD SV+ VVE D+ A+ER + +YHVL G+LSPL+ +GP D+ I+ Sbjct: 66 TDPCVICTAEKRDHSVVCVVEQPPDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDLRIK 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ ++E+I A + +EG+ TA YI LK + V++TR+A+G+P+G +L+Y D+ Sbjct: 126 ELVTRVGTTDVQEVIMATNPNVEGEATAMYIAKLLKPMGVRVTRIAHGLPVGGDLEYADE 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 186 VTLSRAMENRREI 198 >gi|312142721|ref|YP_003994167.1| recombination protein RecR [Halanaerobium sp. 'sapolanicus'] gi|311903372|gb|ADQ13813.1| recombination protein RecR [Halanaerobium sp. 'sapolanicus'] Length = 199 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 124/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + LI L+++PG GP++ARR + +++ + + + L++A+ +K+ CS Sbjct: 1 MNPYPRPMGKLIGELSKLPGIGPKTARRLSFYILGQSKNEVKTLSDALIEARDKINYCSR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ D C+ C +RD S+I VVE D+ A+E++ N LYHVL G++SP+D IGP Sbjct: 61 CNHLTEGDICSFCSSDERDLSIICVVESPRDVVAMEKTGEYNGLYHVLHGAISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I I+SL+ R+E ++ E+I A EG TA Y+ +K + VK+TR+A+GIP+G + Sbjct: 121 DQIKIRSLMPRLEKGEVEEIIIATDPNAEGDATAMYLAKLIKPLGVKVTRIAHGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ +A+ R + Sbjct: 181 LEYADEVTLSKALEGRREI 199 >gi|170780615|ref|YP_001708947.1| recombination protein RecR [Clavibacter michiganensis subsp. sepedonicus] gi|169155183|emb|CAQ00283.1| putative recomination protein RecR [Clavibacter michiganensis subsp. sepedonicus] Length = 199 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 122/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C+ICG Sbjct: 1 MYEGIVQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAEVLTVVRDKVRFCAICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +R + I VVE+ D+ A+ER++ LYHVLGG++SP+D IGP+D Sbjct: 61 NVSEEETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ + E+I A +EG+ TA Y+ L D+++TRLA G+P+G +L+ Sbjct: 121 LRIRQLMQRLADATVTEVIIATDPNLEGEATATYLSRLLSTFDIRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|266621801|ref|ZP_06114736.1| recombination protein RecR [Clostridium hathewayi DSM 13479] gi|288866490|gb|EFC98788.1| recombination protein RecR [Clostridium hathewayi DSM 13479] Length = 198 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ E+ + LA ++ + V C Sbjct: 1 MDYYSSQITKLIEELSKLPGIGSKSAQRLAFHIINMPEESVTSLASSITEAKHNVHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +R+ VI+VVED DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDQELCPICKSDKRNHKVIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA Y+ +K V++TR+A G+P+G + Sbjct: 121 NDIKLKELMQRL-QGDVEEVIIATNSSLEGETTAMYLSKLIKPTGVRVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 180 LEYIDEVTLLRALEGRVEL 198 >gi|220909545|ref|YP_002484856.1| recombination protein RecR [Cyanothece sp. PCC 7425] gi|254790763|sp|B8HXF0|RECR_CYAP4 RecName: Full=Recombination protein recR gi|219866156|gb|ACL46495.1| recombination protein RecR [Cyanothece sp. PCC 7425] Length = 205 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + + LI+ L R+PG GP++A+R LHL+K+ + + LA+A+ +V LCS Sbjct: 1 MSTVYTRPLARLIEQLQRLPGVGPKTAQRLALHLLKRPDSEVQALAQALLEAKQQVGLCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C ++ C +C RD + VV D D+ ALE+++ + YHVLGG +SP++ IG Sbjct: 61 VCFHLSAEPVCEVCRAPSRDEGTLCVVADSRDVIALEKTREYHGKYHVLGGLISPMEGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI----DVKITRLAYGI 177 PE + IQ LI+R+ + E+I AIS +IEG+TT YI LK + K+TR+A+G+ Sbjct: 121 PEQLHIQPLIQRVSQTAVEEVIMAISPSIEGETTTLYIAQLLKPLTKLKGAKVTRIAFGL 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 PMG +L+Y D+ T+ A+ R L Sbjct: 181 PMGGDLEYADEVTLARALEGRREL 204 >gi|300867805|ref|ZP_07112448.1| recombination protein RecR [Oscillatoria sp. PCC 6506] gi|300334222|emb|CBN57620.1| recombination protein RecR [Oscillatoria sp. PCC 6506] Length = 197 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG GP++A+R LH++K+ E+ + LA+++ + +V C +C Sbjct: 1 MYTRPLARLIEQLQRLPGIGPKTAQRLALHILKRPEEEIEALAQSLIDAKEQVGFCEVCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + RD+ I VV D D+ A+E+++ YHVLGG +SP+D IGPE Sbjct: 61 HLSADPVCEICRNPNRDSDTICVVTDSRDVIAIEKTREYIGKYHVLGGVISPMDGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ I+E+I AIS ++EG+TT Y+ +K K+TR+A+G+PMG +L+ Sbjct: 121 LNIEQLVRRVSHDDIKEVIIAISPSVEGETTTLYVGRLVKPF-TKVTRIAFGLPMGGDLE 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R +L Sbjct: 180 YADEVTLARALEGRRLL 196 >gi|239623038|ref|ZP_04666069.1| recombination protein RecR [Clostridiales bacterium 1_7_47_FAA] gi|239522405|gb|EEQ62271.1| recombination protein RecR [Clostridiales bacterium 1_7_47FAA] Length = 198 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+++PG G +SA+R H++ ++ + LA AM N V C Sbjct: 1 MDYYSSQITKLIEELSKLPGVGAKSAQRLAFHIINMPKEQVEELAGAMTGARNNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +R+ I+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDKELCPICSSDRRNHKTIMVVENTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 NDIKLKELMQRL-QSDVEEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT + Sbjct: 180 LEYIDEVTLLRALEGRTEI 198 >gi|197302303|ref|ZP_03167362.1| hypothetical protein RUMLAC_01030 [Ruminococcus lactaris ATCC 29176] gi|197298734|gb|EDY33275.1| hypothetical protein RUMLAC_01030 [Ruminococcus lactaris ATCC 29176] Length = 198 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ +R+PG G +SA+R H++ + LA A+ + V C Sbjct: 1 MDYYSHQISRLIEEFSRLPGIGSKSAQRLAFHVINMPLDQVEGLANAIVDARKNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDQDVCPICSNPDRDKKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIRLKELMQRL-QGDVDEVIIATNSSVEGETTAMYISKLIKPAGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALDGRTEL 198 >gi|238922754|ref|YP_002936267.1| recombinational DNA repair protein [Eubacterium rectale ATCC 33656] gi|238874426|gb|ACR74133.1| recombinational DNA repair protein [Eubacterium rectale ATCC 33656] gi|291526534|emb|CBK92121.1| recombination protein RecR [Eubacterium rectale DSM 17629] Length = 198 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 EI LI+ L+++PG G ++A+R H++ ++ L++A+ + V C Sbjct: 1 MDFYSSEISKLIEELSQLPGIGAKTAQRLAFHIINMPKEQAKSLSDAIIDAKEHVRYCKC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D RD I+VVE+ DL A E++ +YHVLGG++SP+ IGP Sbjct: 61 CYTLTDDELCPICKDAARDHKTIMVVENTRDLVAYEKTGKYEGVYHVLGGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R+ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 ADIRLKELMVRL-EKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A++ RT + Sbjct: 180 LEYIDEVTLLRALQGRTEI 198 >gi|291527023|emb|CBK92609.1| recombination protein RecR [Eubacterium rectale M104/1] Length = 198 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 EI LI+ L+++PG G ++A+R H++ ++ L++A+ + V C Sbjct: 1 MDFYSSEISKLIEELSQLPGIGAKTAQRLAFHIINMPKEQAKSLSDAIIDAKEHVRYCKC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D RD I+VVE+ DL A E++ +YHVLGG++SP+ IGP Sbjct: 61 CYTLTDDELCPICKDAARDHKTIMVVENTRDLVAYEKTGKYEGVYHVLGGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R+ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 ADIRLKELMVRL-EKDVNEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A++ RT + Sbjct: 180 LEYIDEVTLLRALQGRTEI 198 >gi|91974567|ref|YP_567226.1| recombination protein RecR [Rhodopseudomonas palustris BisB5] gi|123735881|sp|Q13F14|RECR_RHOPS RecName: Full=Recombination protein recR gi|91681023|gb|ABE37325.1| DNA replication and repair protein RecR [Rhodopseudomonas palustris BisB5] Length = 201 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 110/199 (55%), Positives = 150/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +C Sbjct: 1 MATAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 61 KSCGNIDTRNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R + E+I A++AT++GQTTAHY+ D L+ VK+TRLA+G+P+G Sbjct: 121 GPDDLTIDALVARAHDPAVSEIILALNATVDGQTTAHYVTDLLQEAGVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|257783927|ref|YP_003179144.1| recombination protein RecR [Atopobium parvulum DSM 20469] gi|257472434|gb|ACV50553.1| recombination protein RecR [Atopobium parvulum DSM 20469] Length = 203 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 122/194 (62%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 G+ ++ L+ L R+PG GP+SA+R HL++ + LA+ + + +V C IC N Sbjct: 9 GRALQRLLDELGRLPGIGPKSAQRIAYHLLEVDSEEARRLAQVILELKQQVHFCPICFNY 68 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T + C IC+D RD S I VV + D+ A+ER+ A + LYHVLGG +SP+D+IGPE + Sbjct: 69 ATRNECDICLDSSRDRSKICVVSEPKDVSAIERTGAFHGLYHVLGGVISPMDKIGPEQLH 128 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 ++ L+ R+ + E++ A + +EG+TTA Y+ + + V++TRLA G+P+G +L+Y Sbjct: 129 VRELLSRLADGTVTEVVLATNPDVEGETTATYLSRTINPLGVRVTRLASGLPVGGDLEYA 188 Query: 187 DDGTIFEAIRSRTV 200 D+ T+ AI +R Sbjct: 189 DEVTLGRAIEARRE 202 >gi|217976470|ref|YP_002360617.1| recombination protein RecR [Methylocella silvestris BL2] gi|254790777|sp|B8EP17|RECR_METSB RecName: Full=Recombination protein recR gi|217501846|gb|ACK49255.1| recombination protein RecR [Methylocella silvestris BL2] Length = 201 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 118/199 (59%), Positives = 155/199 (77%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +I G EIE LI++LAR+PG GPRSARRA LHL++K+E+L GPLAEAM + + C Sbjct: 1 MGDRICGPEIERLIQLLARLPGLGPRSARRAALHLIRKREELFGPLAEAMRVARDTIVSC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGNVD+ DPC IC D++RD S +IVVE V DLWALERS AV YHVLGG LSPLD + Sbjct: 61 SVCGNVDSCDPCTICRDERRDPSTLIVVETVGDLWALERSGAVKGRYHVLGGVLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I SLIER+ I E++ A++AT++GQTTAHY+ D + ++V+ TRLA+G+P+G Sbjct: 121 GPKDLNISSLIERVAAGGISEVVLAVNATVDGQTTAHYVTDLISHLNVRTTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R+RT Sbjct: 181 GELDYLDEGTLAAALRART 199 >gi|148272080|ref|YP_001221641.1| recombination protein RecR [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|172047219|sp|A5CPD8|RECR_CLAM3 RecName: Full=Recombination protein recR gi|147830010|emb|CAN00938.1| putative recombination protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 199 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 122/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + LAE + + +KV C+ICG Sbjct: 1 MYEGIVQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAEVLTVVRDKVRFCAICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +R + I VVE+ D+ A+ER++ LYHVLGG++SP+D IGP+D Sbjct: 61 NVSEKETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGLYHVLGGAISPIDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ + E+I A +EG+ TA Y+ L D+++TRLA G+P+G +L+ Sbjct: 121 LRIRQLMQRLADATVTEVIIATDPNLEGEATATYLSRLLSTFDIRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|256831656|ref|YP_003160383.1| recombination protein RecR [Jonesia denitrificans DSM 20603] gi|256685187|gb|ACV08080.1| recombination protein RecR [Jonesia denitrificans DSM 20603] Length = 199 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H++ + L +A+ + +V C CG Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHILSADSDDIARLTQAIVEVKRRVRFCDECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +R A VI VVE+ D+ A+ER++ YHVLGG+++P+D +GP+D Sbjct: 61 NVAEEERCRICRDPRRSAEVICVVEEAKDVVAIERTREFRGKYHVLGGAINPMDNVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ + E+I A+ +EG+ TA Y+ L I +++TRLA G+P+G +L+ Sbjct: 121 LRISELMTRLADGTVTEIILAMDPNVEGEATATYLARLLGAIGIRVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R ++ Sbjct: 181 YADEVTLGRAFEGRRLM 197 >gi|86747792|ref|YP_484288.1| recombination protein RecR [Rhodopseudomonas palustris HaA2] gi|123099182|sp|Q2J2D3|RECR_RHOP2 RecName: Full=Recombination protein recR gi|86570820|gb|ABD05377.1| DNA replication and repair protein RecR [Rhodopseudomonas palustris HaA2] Length = 201 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 110/199 (55%), Positives = 151/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +C Sbjct: 1 MAIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A N YHVLG +LSPLD + Sbjct: 61 KTCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R + E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G Sbjct: 121 GPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|90020984|ref|YP_526811.1| recombinational DNA repair protein [Saccharophagus degradans 2-40] gi|122996350|sp|Q21L30|RECR_SACD2 RecName: Full=Recombination protein recR gi|89950584|gb|ABD80599.1| recombination protein RecR [Saccharophagus degradans 2-40] Length = 197 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 116/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ LI L +PG GP+SA+R LHL+++ + L+E +A V C C Sbjct: 1 MFSPLIDQLINSLRHLPGVGPKSAQRMALHLLERDREGAQNLSEVLAKAVEHVHRCQQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R+ + +VE AD+ A+E S + Y VL G LSP+D IGP++ Sbjct: 61 TLTEQALCNICSNARRNRKELCIVETPADVIAIETSAVFSGYYFVLLGRLSPIDGIGPKE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R +I E+I A + TIEG+ TAHYI ++ K +K++R+A+GIP+G EL+ Sbjct: 121 IGMDVLASRFAEGEIEEVIIATNPTIEGEATAHYISERAKAQGIKVSRIAHGIPIGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D GT+ AI R + Sbjct: 181 YVDGGTLAHAISRRQEI 197 >gi|296447824|ref|ZP_06889737.1| recombination protein RecR [Methylosinus trichosporium OB3b] gi|296254683|gb|EFH01797.1| recombination protein RecR [Methylosinus trichosporium OB3b] Length = 201 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 113/200 (56%), Positives = 156/200 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++I G EIE L+++LAR+PG GPRSARRA LHL++K+++LLGPL EAM + ++ C Sbjct: 1 MAERIAGPEIERLVQLLARLPGLGPRSARRAVLHLIRKRDELLGPLGEAMRVAHERILAC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGN+DT+DPCAIC D +RDA ++++VE VADLWALER+ + A YHVLGG LSPLD + Sbjct: 61 SVCGNIDTSDPCAICRDPRRDAGLLVIVETVADLWALERAGLLAARYHVLGGVLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + SL++RI +RE I A++AT++GQTTAHY+ D L + VK TRLA+G+P+G Sbjct: 121 GPSELNMASLVQRIGEGGVREAIIAVNATVDGQTTAHYLADLLAPLGVKTTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ A+ RT Sbjct: 181 GELDYLDEGTLAAALDRRTP 200 >gi|295395501|ref|ZP_06805696.1| recombination protein R [Brevibacterium mcbrellneri ATCC 49030] gi|294971672|gb|EFG47552.1| recombination protein R [Brevibacterium mcbrellneri ATCC 49030] Length = 204 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 122/199 (61%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 I + +L+ L ++PG GP+SA+R H+++ Q + LA A+ + +V C Sbjct: 1 MSAIYDGALADLVDELGKLPGIGPKSAQRLAFHILQSPAQQVEQLASALTEVKRRVNFCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGNV + CAIC D +RD SVI VVE+ D+ A+ER++ LYHVLGG++ P+ IG Sbjct: 61 ICGNVAEGEKCAICQDTRRDQSVICVVEEAKDVVAIERTREYRGLYHVLGGAIDPMAGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+ + I+ L+ R++ ++E + A +EG+ TA Y++ L + V +++LA G+P+G Sbjct: 121 PDQLRIKQLLTRLQTGDVKECVIATDPNLEGEATATYVIRLLSTVGVNVSKLASGLPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 +L+Y D+ T+ A + RT Sbjct: 181 DLEYADEVTLGRAFQGRTQ 199 >gi|291520249|emb|CBK75470.1| recombination protein RecR [Butyrivibrio fibrisolvens 16/4] Length = 199 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + KEI NLI L+ +P G +SA+R H++ E+ + LA A+ V C Sbjct: 1 MEYYSKEISNLIAELSDLPSIGSKSAQRLAFHILGMDEEKVNDLANAIIQARKNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + +R+ ++I+VVED DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDDELCPICSNPKRNKNIIMVVEDTRDLAAYEKTGKFDGVYHVLHGAISPMAGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R++ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G Sbjct: 121 GDIKLKELMVRLQQNDVEEVIVATNSSLEGETTAAYISKLIKPTGIKVSRIASGVPVGGN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT + Sbjct: 181 LEYIDEVTLLRALDGRTEI 199 >gi|221194896|ref|ZP_03567952.1| recombination protein RecR [Atopobium rimae ATCC 49626] gi|221184799|gb|EEE17190.1| recombination protein RecR [Atopobium rimae ATCC 49626] Length = 203 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 122/194 (62%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 G+ ++ L+ L R+PG GP+SA+R +L++ + L+ A+ + +V C IC N Sbjct: 9 GRALQRLLDELGRLPGIGPKSAQRIAYYLLEADSEEAQRLSRAILEVKQQVHFCPICFNY 68 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T D C +C+D R+ S I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + Sbjct: 69 ATRDECDVCMDASRNRSEICVVSEPRDVSAIERTGVYHGLYHVLGGVISPMDKIGPEQLH 128 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 ++ L+ R+ ++E++ A + +EG+TTA Y+ + + VK++RLA G+P+G +L+Y Sbjct: 129 VRELLSRLADGTVQEVLLATNPDVEGETTATYLARTIAPLGVKVSRLASGLPVGGDLEYA 188 Query: 187 DDGTIFEAIRSRTV 200 D+ T+ AI +R Sbjct: 189 DEVTLGRAIEARRE 202 >gi|260893958|ref|YP_003240055.1| recombination protein RecR [Ammonifex degensii KC4] gi|260866099|gb|ACX53205.1| recombination protein RecR [Ammonifex degensii KC4] Length = 198 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 81/196 (41%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ L R+PG G R+A+R +L+ + LAEA+ K CS+CGN Sbjct: 3 YPRPLARLIEELKRLPGIGSRTAQRLAFYLLSAPPEEALRLAEAIKEAREKTFYCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 DPC+IC D +RD +I VVE D+ A+ER+ +YHVL G LSPLD +GP+ + Sbjct: 63 FTDIDPCSICSDARRDKGIICVVEMPRDVVAIERAGCFKGVYHVLHGVLSPLDGVGPDKL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 IQ L++R++ ++RE+I A S+T EG+ TA Y+ LK ++VK++RLAYG+P+G+E++ Sbjct: 123 RIQELLQRLQEGEVREVILATSSTTEGEATALYLKRLLKPLEVKVSRLAYGLPVGAEIEL 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ TI A+ R + Sbjct: 183 ADEETISRALEGRREI 198 >gi|302669598|ref|YP_003829558.1| recombinational DNA repair protein RecR [Butyrivibrio proteoclasticus B316] gi|302394071|gb|ADL32976.1| recombinational DNA repair protein RecR [Butyrivibrio proteoclasticus B316] Length = 199 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 119/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ I LI L+ +PG G +SA+R +L+ + + LA+++ N V C Sbjct: 1 MELYSGHINKLIDELSSLPGIGGKSAQRLAFYLIGLPKDRVHKLADSIVNARENVHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC + RD I+VVE+ DL A E++ +YHVL G++SP+ +GP Sbjct: 61 CCTLTDDDICPICSNPGRDHKTIMVVENARDLAAYEKTGKFEGVYHVLHGAISPMLGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + L++R++ ++ E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 GDIRLAELMQRLQTHEVEEVIVATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 181 LEYIDEVTLLRALEGRTEL 199 >gi|225378765|ref|ZP_03755986.1| hypothetical protein ROSEINA2194_04435 [Roseburia inulinivorans DSM 16841] gi|225209394|gb|EEG91748.1| hypothetical protein ROSEINA2194_04435 [Roseburia inulinivorans DSM 16841] Length = 217 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+ +PG G +SA+R H++ + + L+EA+ N V C Sbjct: 20 MDYYSSQINKLIQELSELPGIGAKSAQRLAFHILNMPVEQVEGLSEAIINARKNVRYCKE 79 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D R+ I+VVE+ DL A E+++ + +YHVL G++SP+ IGP Sbjct: 80 CFTLTDDELCPICKDASRNHKTIMVVENTRDLAAYEKTQKYDGVYHVLHGAISPMLGIGP 139 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 140 NDIKLKELMQRL-QQDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 198 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 199 LEYIDEVTLLRALEGRTEL 217 >gi|314937926|ref|ZP_07845242.1| recombination protein RecR [Enterococcus faecium TX0133a04] gi|314941417|ref|ZP_07848310.1| recombination protein RecR [Enterococcus faecium TX0133C] gi|314948528|ref|ZP_07851908.1| recombination protein RecR [Enterococcus faecium TX0082] gi|314951283|ref|ZP_07854337.1| recombination protein RecR [Enterococcus faecium TX0133A] gi|314992886|ref|ZP_07858287.1| recombination protein RecR [Enterococcus faecium TX0133B] gi|314998090|ref|ZP_07862978.1| recombination protein RecR [Enterococcus faecium TX0133a01] gi|313587932|gb|EFR66777.1| recombination protein RecR [Enterococcus faecium TX0133a01] gi|313592690|gb|EFR71535.1| recombination protein RecR [Enterococcus faecium TX0133B] gi|313596500|gb|EFR75345.1| recombination protein RecR [Enterococcus faecium TX0133A] gi|313599840|gb|EFR78683.1| recombination protein RecR [Enterococcus faecium TX0133C] gi|313642784|gb|EFS07364.1| recombination protein RecR [Enterococcus faecium TX0133a04] gi|313645025|gb|EFS09605.1| recombination protein RecR [Enterococcus faecium TX0082] Length = 200 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 127/201 (63%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + I LI ++PG G ++A R + + K++++ A+++ ++ + C Sbjct: 1 MNMQY-PEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGN+ DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ Sbjct: 60 SICGNITEEDPCEICRNPSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGT 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDI I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +G Sbjct: 120 GPEDINISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S+++Y D+ T+ +A+ R L Sbjct: 180 SDIEYADEVTLLKAVEGRREL 200 >gi|298294316|ref|YP_003696255.1| recombination protein RecR [Starkeya novella DSM 506] gi|296930827|gb|ADH91636.1| recombination protein RecR [Starkeya novella DSM 506] Length = 201 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 113/201 (56%), Positives = 158/201 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++LAR+PG GPRSARRA LHL+KK+EQL+ PLA A + K+ C Sbjct: 1 MPRAVAGPEIERLIQLLARVPGLGPRSARRAALHLIKKREQLMSPLASAFEEVLGKISTC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGN+D DPC+IC+D+ RD ++++VV DV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 RVCGNIDVRDPCSICVDETRDPTLLVVVADVSDLWALERAGAINARYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ +++LIER ++E++ A+ AT++GQTTAHY+ + L+ V +TRLA+G+P+G Sbjct: 121 GPEDLNLKTLIERAHDGTVKEVLLALGATVDGQTTAHYVTEMLRDSGVAVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ AI++RT L Sbjct: 181 GELDYLDEGTLAAAIKARTSL 201 >gi|22299747|ref|NP_682994.1| recombination protein RecR [Thermosynechococcus elongatus BP-1] gi|34222856|sp|Q8DGV8|RECR_THEEB RecName: Full=Recombination protein recR gi|22295931|dbj|BAC09756.1| recombination protein [Thermosynechococcus elongatus BP-1] Length = 202 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 124/200 (62%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + + LI+ L R+PG GP++A+R LHL+K+ E + LA+A+ +V LCS Sbjct: 1 MSSVYTRPLARLIEQLQRLPGIGPKTAQRLALHLIKRPEADIQALAQALLEAKQQVGLCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C ++ C IC QRD I VV D D+ A+E+++ + YHVLGG +SPL+ I Sbjct: 61 VCFHLSAEPVCEICASPQRDNHTICVVADSRDVIAIEKTREYHGKYHVLGGLISPLEGIT 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 PE + IQ LI+R ++ E+I AI+ +IEG+TT Y+ L+ VK+TR+A+G+P+G Sbjct: 121 PEHLHIQPLIQRASQPQVEEVILAINPSIEGETTTLYVGQLLRPF-VKVTRIAFGLPVGG 179 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +LDY D+ T+ A+ R + Sbjct: 180 DLDYADEMTLARALAGRREI 199 >gi|256826357|ref|YP_003150317.1| DNA replication and repair protein RecR [Kytococcus sedentarius DSM 20547] gi|256689750|gb|ACV07552.1| DNA replication and repair protein RecR [Kytococcus sedentarius DSM 20547] Length = 204 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 123/195 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R H++ + + LA A+ + KV C+ CG Sbjct: 1 MYEGAVQDLIDELNRLPGVGPKSAQRIAFHVLAADAEDVQRLATALQVVKEKVRFCATCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC+D QRD + I VVE+ D+ A+ER++ YHVLGG++SPLD IGP+D Sbjct: 61 NVAEAEECRICLDPQRDGTAICVVEEPRDVQAIERTREFRGRYHVLGGAISPLDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L++R+ ++ E+I A +EG+ TA Y+ L+ +++K++RLA G+P+G +L+ Sbjct: 121 LRIAQLMQRLGDGEVTEVIIATDPNMEGEATATYLSRMLQVLEIKVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRR 195 >gi|269925418|ref|YP_003322041.1| recombination protein RecR [Thermobaculum terrenum ATCC BAA-798] gi|269789078|gb|ACZ41219.1| recombination protein RecR [Thermobaculum terrenum ATCC BAA-798] Length = 199 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 82/196 (41%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + +E LI+ +++PG GP++A R T L++ ++ LA+A+ + K LCS C N Sbjct: 4 TAEPVERLIEEFSKLPGIGPKTASRLTYWLLRSSKEQAESLADAIRELKEKTTLCSECFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC + RD SVI VVE+ D+ A+E + LYHVL G LSPLD I P+ + Sbjct: 64 ITDVDPCRICSSESRDRSVICVVEEPLDVRAIENTNEYKGLYHVLHGLLSPLDGITPDKL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 +Q L +R+ ++E+I A + T+EG TA YI LK ++VKITRLAYG+P+G +L+Y Sbjct: 124 KLQELKDRVARGGVKEVIIATNPTLEGSNTAFYIARLLKNLNVKITRLAYGLPVGGDLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A++ R + Sbjct: 184 ADEVTLSRALQGRQSI 199 >gi|90426317|ref|YP_534687.1| recombination protein RecR [Rhodopseudomonas palustris BisB18] gi|122474846|sp|Q20WW8|RECR_RHOPB RecName: Full=Recombination protein recR gi|90108331|gb|ABD90368.1| recombination protein RecR [Rhodopseudomonas palustris BisB18] Length = 201 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 108/199 (54%), Positives = 150/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EIE LI++LA++PG GPRSARRA LHL+KK+E L+ PLA A+ ++ +C Sbjct: 1 MAAAVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKREALMAPLASALQVAIERIQVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGN+DT +PC +C D +RD S+I+VV DVADLWALER+ A + YHVLG +LSPLD + Sbjct: 61 KVCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERAHAASGRYHVLGATLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I +L+ R ++ E++ A++AT++GQTTAHYI D L VK+TRLA+G+P+G Sbjct: 121 GPDDLSIDALVARAHDPQVSEIVLALNATVDGQTTAHYITDLLMEAGVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 GELDYLDEGTLSAAMRQRT 199 >gi|238917929|ref|YP_002931446.1| recombination protein RecR [Eubacterium eligens ATCC 27750] gi|238873289|gb|ACR72999.1| recombination protein RecR [Eubacterium eligens ATCC 27750] Length = 198 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I I LI+ L+R+PG G +SA+R H++ E + LA+ M + + C Sbjct: 1 MDIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC DQ+RD I+VVE D+ A E++ +YHVL G++SP+ IGP Sbjct: 61 CFTLTDEELCPICRDQKRDHKTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R+ + E+I A ++ +EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 ADIRLKELMVRL-QGDVDEVIIATNSNLEGETTAMYISKMIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALDGRTEL 198 >gi|227550402|ref|ZP_03980451.1| recombination protein RecR [Enterococcus faecium TX1330] gi|227180461|gb|EEI61433.1| recombination protein RecR [Enterococcus faecium TX1330] Length = 200 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 127/201 (63%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + I LI ++PG G ++A R + + K++++ A+++ ++ + C Sbjct: 1 MNMQY-PEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGN+ DPC IC + RD S+I+VVE+ D+ A+E+ + + LYHVL G LSP++ Sbjct: 60 SICGNITEEDPCEICRNPSRDRSIILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGT 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDI I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +G Sbjct: 120 GPEDINISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S+++Y D+ T+ +A+ R L Sbjct: 180 SDIEYADEVTLLKAVEGRREL 200 >gi|16332099|ref|NP_442827.1| recombination protein RecR [Synechocystis sp. PCC 6803] gi|3024523|sp|P74533|RECR_SYNY3 RecName: Full=Recombination protein recR gi|1653728|dbj|BAA18639.1| recombination protein [Synechocystis sp. PCC 6803] Length = 232 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I + LI+ L R+P GP++A+R LHL+K+ + + LA+A+ + +V C +C Sbjct: 37 IYTPPLARLIEQLQRLPSVGPKTAQRLALHLLKRPDAEVENLAQALLDAKKRVGQCQVCF 96 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC QRD SVI VV D D+ ALE+++ YHVLGG +SP+D IGPE Sbjct: 97 HLSAEPVCDICRHPQRDNSVICVVSDPRDVIALEKTREFRGKYHVLGGVISPMDGIGPEQ 156 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + IQ L+ R+ +I+E+I AIS ++EG+TT Y+ L+ K+TR+A+G+PMG +L+ Sbjct: 157 LTIQPLLHRVSQPEIKEVILAISPSVEGETTTLYLGKLLQPF-TKVTRIAFGLPMGGDLE 215 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 216 YADEVTLARALEGRREL 232 >gi|300744278|ref|ZP_07073297.1| recombination protein RecR [Rothia dentocariosa M567] gi|300380003|gb|EFJ76567.1| recombination protein RecR [Rothia dentocariosa M567] Length = 378 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R +++ + L A++ + + V C ICG Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFYILNSDASDMARLTNAISKVKSSVSFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV T C IC D +RD +I VVE+ D+ A+ER+++ YHVLGG+++PL +GPE Sbjct: 61 NVSETKQCVICRDDRRDPGLICVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGLGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + ++++RLA G+P+G +L+ Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGIRLSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R V+ Sbjct: 181 YADEITLGRALEGRRVI 197 >gi|311112887|ref|YP_003984109.1| recombination protein R [Rothia dentocariosa ATCC 17931] gi|310944381|gb|ADP40675.1| recombination protein R [Rothia dentocariosa ATCC 17931] Length = 379 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L R+PG GP+SA+R +++ + L A++ + + V C ICG Sbjct: 1 MYEGAVQNLIDELGRLPGVGPKSAQRIAFYILNSDASDMARLTNAISKVKSSVSFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV T C IC D +RD +I VVE+ D+ A+ER+++ YHVLGG+++PL +GPE Sbjct: 61 NVSETKQCVICRDDRRDPGLICVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGLGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++I+E+I A+ +EG+ TA Y+ L + ++++RLA G+P+G +L+ Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGIRLSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R V+ Sbjct: 181 YADEITLGRALEGRRVI 197 >gi|229816761|ref|ZP_04447043.1| hypothetical protein BIFANG_02008 [Bifidobacterium angulatum DSM 20098] gi|229785777|gb|EEP21891.1| hypothetical protein BIFANG_02008 [Bifidobacterium angulatum DSM 20098] Length = 200 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 123/200 (61%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI +++PG GP+ A+R +++ E+ LA+A+ + KV C Sbjct: 1 MALAYDG-AIQRLIDAFSKLPGIGPKGAQRIAFYILGSDEREAADLADAITEVKAKVKFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGNV PC +C+D +RD S+I VVE+ D+ ++ER++ + LYHVLGG+++P+ + Sbjct: 60 EVCGNVCEASPCPVCLDPRRDHSIICVVEEPKDVMSIERTREYHGLYHVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I L+ER+ + E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G Sbjct: 120 GPNDLNIAKLLERLGDGSVTEVILALDPNIEGEATTTYLSRLLSQVGIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S+L+Y D+ T+ A+ R Sbjct: 180 SDLEYADEITLGRALSGRRE 199 >gi|167767542|ref|ZP_02439595.1| hypothetical protein CLOSS21_02061 [Clostridium sp. SS2/1] gi|317498611|ref|ZP_07956904.1| recombination protein RecR [Lachnospiraceae bacterium 5_1_63FAA] gi|167710834|gb|EDS21413.1| hypothetical protein CLOSS21_02061 [Clostridium sp. SS2/1] gi|291558498|emb|CBL37298.1| recombination protein RecR [butyrate-producing bacterium SSC/2] gi|316894098|gb|EFV16287.1| recombination protein RecR [Lachnospiraceae bacterium 5_1_63FAA] Length = 198 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 119/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L ++PG GP+SA R H++ + + L++ + + V C Sbjct: 1 MDYYSNQITQLIEELGKLPGIGPKSAGRLAFHIINMPQDQVQKLSDTIISAKTNVHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +RD S I+VVE+ DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CCTLTDNEICPICASDKRDHSTIMVVENTRDLMAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L+ R+ ++ELI A ++++EG+TTA YI +K +K++++A G+P+G + Sbjct: 121 DDIRLKELMARL-QGDVKELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT + Sbjct: 180 LEYIDEVTLLRALEGRTEI 198 >gi|254780762|ref|YP_003065175.1| recombination protein RecR [Candidatus Liberibacter asiaticus str. psy62] gi|254040439|gb|ACT57235.1| recombination protein RecR [Candidatus Liberibacter asiaticus str. psy62] Length = 201 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 201/201 (100%), Positives = 201/201 (100%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC Sbjct: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI Sbjct: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG Sbjct: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SELDYLDDGTIFEAIRSRTVL Sbjct: 181 SELDYLDDGTIFEAIRSRTVL 201 >gi|229917434|ref|YP_002886080.1| recombination protein RecR [Exiguobacterium sp. AT1b] gi|259563696|sp|C4KZX2|RECR_EXISA RecName: Full=Recombination protein recR gi|229468863|gb|ACQ70635.1| recombination protein RecR [Exiguobacterium sp. AT1b] Length = 199 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG GP++A R H++ +E + A+++ + + C++CG+ Sbjct: 3 YPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC D RD +V+ VV+D D+ A+E+ + YHVL G++SP++ IGPEDI Sbjct: 63 ITDIDPCAICKDSHRDETVVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + SL+ R++ + I+E+I A + IEG+ T+ Y+ LK +++TRLA+G+P+G +L+ Sbjct: 123 NVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRLLKPTGIRVTRLAHGLPVGGDLE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 183 YADEVTLSRAMEGRREL 199 >gi|169830252|ref|YP_001716234.1| recombination protein RecR [Candidatus Desulforudis audaxviator MP104C] gi|254790796|sp|B1I162|RECR_DESAP RecName: Full=Recombination protein recR gi|169637096|gb|ACA58602.1| recombination protein RecR [Candidatus Desulforudis audaxviator MP104C] Length = 198 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 123/195 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ LAR+PG GP++A+R HLV + L+ A+ +K+ C +C N Sbjct: 3 YSRSVGRLIEELARLPGIGPKTAQRLAFHLVTAPREAAESLSRAILEARDKLVFCRVCAN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +PC IC DQ RD +I VVE D+ A+E++ LYHVL GSLSPL +GPE++ Sbjct: 63 IADENPCGICRDQNRDHGLICVVERPRDVLAVEKAHGYRGLYHVLNGSLSPLQGVGPEEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ R+ +RE+I A +AT+EG+ TA Y+ L+ ++V++TRLA+G+P+GS+L+Y Sbjct: 123 NIAALVTRVREGTVREVIVATNATVEGEATALYLARLLRPLNVRVTRLAFGLPVGSDLEY 182 Query: 186 LDDGTIFEAIRSRTV 200 D T+ AI R Sbjct: 183 ADGRTLARAIEGRRE 197 >gi|240146636|ref|ZP_04745237.1| recombination protein RecR [Roseburia intestinalis L1-82] gi|257201178|gb|EEU99462.1| recombination protein RecR [Roseburia intestinalis L1-82] gi|291537735|emb|CBL10847.1| Recombinational DNA repair protein (RecF pathway) [Roseburia intestinalis M50/1] gi|291537869|emb|CBL10980.1| recombination protein RecR [Roseburia intestinalis XB6B4] Length = 198 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 119/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+ +PG G +SA+R H++ + + L+ A+ + V C Sbjct: 1 MDYYSSQISKLIQELSSLPGIGAKSAQRLAFHILNMPVEQVEELSSAIVDARKNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D R+ I+VVED DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDDELCPICKDAGRNHKTIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ K + E+I A ++++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 ADIKLKELMQRL-QKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT + Sbjct: 180 LEYIDEVTLLRALEGRTEI 198 >gi|291543055|emb|CBL16165.1| recombination protein RecR [Ruminococcus bromii L2-63] Length = 200 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 119/200 (59%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 +ENL++ R+PG G ++A+R +++ + LA A+ + + K+ CS Sbjct: 1 MSGYNVAPLENLVEQFERMPGIGNKTAQRLAYYVLNLSKTEAEQLAGAVMDAHTKIHYCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C N+ D C +C + RD SVI VVE D A+E + +YHVL GS+SPL+ IG Sbjct: 61 KCCNLTDKDLCPVCANPTRDHSVICVVETPRDATAIENTHEFKGVYHVLHGSISPLNDIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+++ I+ L+ R+ + + E+I A + T+EG TA YI LK + VK+TRLAYGIP+G Sbjct: 121 PDNLTIKELLARLNEESVEEVIMATNPTVEGDATALYISKLLKPLGVKVTRLAYGIPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ +A+ R + Sbjct: 181 DLEYADEYTLAKALEGRNEI 200 >gi|159030384|emb|CAO91280.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 203 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I + LI+ L ++PG GP+SA+R L+++K+ EQ LA+A+ +V LC + Sbjct: 6 TAIYTPPLARLIEQLQKLPGVGPKSAQRLALYILKRPEQDAIELAQAIVAAKKQVGLCQV 65 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ C IC + R+ I VV D D+ ALE+++ + YHVLGG +SP+D IGP Sbjct: 66 CFHLSAEPICEICRNPNRETGTICVVADSRDVIALEKTREYSGKYHVLGGVISPMDGIGP 125 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + IQSL+ R+ KKI+E+I AIS ++EG+TT YI LK K+TR+A+G+PMG + Sbjct: 126 DQLNIQSLVTRVSQKKIQEVILAISPSVEGETTTLYIGGLLKPF-TKVTRIAFGLPMGGD 184 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ A+ R L Sbjct: 185 LEYADEVTLARALEGRREL 203 >gi|153815988|ref|ZP_01968656.1| hypothetical protein RUMTOR_02233 [Ruminococcus torques ATCC 27756] gi|317500928|ref|ZP_07959138.1| recombination protein RecR [Lachnospiraceae bacterium 8_1_57FAA] gi|331089172|ref|ZP_08338075.1| recombination protein recR [Lachnospiraceae bacterium 3_1_46FAA] gi|145846635|gb|EDK23553.1| hypothetical protein RUMTOR_02233 [Ruminococcus torques ATCC 27756] gi|316897631|gb|EFV19692.1| recombination protein RecR [Lachnospiraceae bacterium 8_1_57FAA] gi|330405949|gb|EGG85475.1| recombination protein recR [Lachnospiraceae bacterium 3_1_46FAA] Length = 198 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 119/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +I LI+ +R+PG G +SA+R H++ + LA+++ + V C + Sbjct: 1 MEYYSNQISRLIEEFSRLPGIGSKSAQRLAFHVINMPLDQVEGLAKSIIDARKNVRYCKV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + RD I+VVE DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDRETCPICGNPDRDKKTIMVVETPRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIRLKELMERL-QGDVNEVIIATNSSLEGETTAMYISKLIKPAGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|302384620|ref|YP_003820442.1| recombination protein RecR [Clostridium saccharolyticum WM1] gi|302195248|gb|ADL02819.1| recombination protein RecR [Clostridium saccharolyticum WM1] Length = 198 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+R+PG G +SA+R H++ E+ + LA ++ V C Sbjct: 1 MNYYSSQITRLIEELSRLPGIGSKSAQRLAFHIINMPEEQVAGLASSITEAKRNVRYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC ++R+ VI+VVED DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CFTLTDQEMCPICRSEKRNHKVIMVVEDTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L++R+ + E+I A ++++EG+TTA YI +K +++TR+A G+P+G + Sbjct: 121 GDIKLKELMQRL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIRVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 180 LEYIDEVTLLRALEGRVEL 198 >gi|312134985|ref|YP_004002323.1| recombination protein recr [Caldicellulosiruptor owensensis OL] gi|311775036|gb|ADQ04523.1| recombination protein RecR [Caldicellulosiruptor owensensis OL] Length = 199 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQ K T I L++ L ++PG G ++A+R +++ K + + LA+A+ + LC Sbjct: 1 MQNKETS--ISKLVQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKISTKLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N + C IC D++RD SVI VVE+ D+ ALER K LYHVL G++SPL Sbjct: 59 KVCCNFTEEEVCPICKDEKRDRSVICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L++R+ I+E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G Sbjct: 119 YPEQLTIDVLLKRLSDPAIKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +++Y D+ TI +AI R + Sbjct: 179 GDIEYADEVTILKAIEGRREI 199 >gi|307544647|ref|YP_003897126.1| recombination protein RecR [Halomonas elongata DSM 2581] gi|307216671|emb|CBV41941.1| recombination protein RecR [Halomonas elongata DSM 2581] Length = 201 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 78/193 (40%), Positives = 115/193 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ L++ +PG GP++A+R +HL+++ + LAE + +V C C Sbjct: 3 FSPLVDRLMESFRVLPGVGPKTAQRMAMHLLERDREGGQRLAEVLGVALEQVGYCQRCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + CA+C +RD SV+ VVE ADL A+E ++ Y VL G LSPLD IGPEDI Sbjct: 63 LTEETICALCKSDRRDDSVLCVVESPADLLAIEEARGYRGRYFVLHGHLSPLDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+ + E+I A + T+EG+ TAHYI +L+ VK++RLAYG+PMG EL+Y Sbjct: 123 GLDQLDARVAEDGVEEVILATNPTVEGEATAHYIASQLEPRGVKLSRLAYGVPMGGELEY 182 Query: 186 LDDGTIFEAIRSR 198 +D GT+ A R Sbjct: 183 VDGGTLSRAFNGR 195 >gi|312127801|ref|YP_003992675.1| recombination protein recr [Caldicellulosiruptor hydrothermalis 108] gi|311777820|gb|ADQ07306.1| recombination protein RecR [Caldicellulosiruptor hydrothermalis 108] Length = 199 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 123/201 (61%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQ+K I LI+ L ++PG G ++A+R +++ K + + LA+A+ + LC Sbjct: 1 MQQKENS--ISKLIQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKTSTKLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL Sbjct: 59 KVCCNFTEDEVCPICKDEKRDKSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L++R+ +I+E+I A + ++G+ TA Y+ +K + +++TR+A GIP+G Sbjct: 119 YPEQLTIDVLMKRLSDPQIKEVIIATNPDVDGEATASYLARLIKPMGIRVTRIARGIPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +++Y D+ TI +AI R + Sbjct: 179 GDIEYADEVTILKAIEGRREI 199 >gi|304437631|ref|ZP_07397585.1| recombination protein R [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369374|gb|EFM23045.1| recombination protein R [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 198 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 120/193 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ L +PG G ++A R H++ + LA A+ K+ CS+C N+ Sbjct: 6 PLAQLIEQLRTLPGIGAKTATRLAYHILDMDMERAHRLAAAITGAKEKIGFCSVCFNLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 +DPCAIC+ ++RD + I VVE D+ A+ER + +YHVL G+LSPL+ +GP DI I+ Sbjct: 66 SDPCAICMAEKRDHTTICVVEQPQDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDIRIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R + ++E+I A + +EG+ TA YI LK + +++TR+A+G+P+G +L+Y D+ Sbjct: 126 ELVLRAGKENVQEVIVATNPNVEGEATAMYIAKLLKPMGIRVTRIAHGLPVGGDLEYADE 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 186 VTLSRAMENRREI 198 >gi|302872028|ref|YP_003840664.1| recombination protein RecR [Caldicellulosiruptor obsidiansis OB47] gi|302574887|gb|ADL42678.1| recombination protein RecR [Caldicellulosiruptor obsidiansis OB47] Length = 199 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 122/201 (60%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQ K T I L++ L ++PG G ++A+R +++ K + + LA+A+ + LC Sbjct: 1 MQNKETS--ISKLVQQLEKLPGIGQKTAQRLAFYIINMKTEDVKALADAILSAKTSTKLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N + C IC D++RD S+I VVE+ D+ ALER K LYHVL G++SPL Sbjct: 59 RVCCNFTEDEVCPICKDEKRDRSIICVVEEPQDVAALERVKEYKGLYHVLHGAISPLKGK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L++R+ I+E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G Sbjct: 119 YPEQLTIDVLLKRLSDPAIKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +++Y D+ TI +AI R + Sbjct: 179 GDIEYADEVTILKAIEGRREI 199 >gi|146337880|ref|YP_001202928.1| recombination protein RecR [Bradyrhizobium sp. ORS278] gi|172046977|sp|A4YLB4|RECR_BRASO RecName: Full=Recombination protein recR gi|146190686|emb|CAL74690.1| Recombination protein recR [Bradyrhizobium sp. ORS278] Length = 199 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 111/197 (56%), Positives = 153/197 (77%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA A+ +++ +C Sbjct: 1 MAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMVPLASALQVAIDRIQVCKT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+DT PC +C D +RD ++I+VV DVADLWALER+KA N YHVLGG+LSPLD +GP Sbjct: 61 CGNIDTQSPCTVCTDPRRDPAMIVVVADVADLWALERAKASNGRYHVLGGTLSPLDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I +L++R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G E Sbjct: 121 QDLTIDALVQRAHAPEVSEIILALNATVDGQTTAHYITDLLQEANVKVTRLAHGVPVGGE 180 Query: 183 LDYLDDGTIFEAIRSRT 199 LDYLD+GT+ A+R RT Sbjct: 181 LDYLDEGTLSAAMRQRT 197 >gi|326790141|ref|YP_004307962.1| recombination protein recR [Clostridium lentocellum DSM 5427] gi|326540905|gb|ADZ82764.1| Recombination protein recR [Clostridium lentocellum DSM 5427] Length = 200 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 116/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 G ++ LI+ L+R+PG G +SA+R H++ + + LA + + C C Sbjct: 4 YYGDKMVALIEELSRLPGIGSKSAQRLAFHIISMPVEKVEHLANTLVAAKKHINYCEKCC 63 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC D R I+VVED D+ A E++K LYH+L G++SP+ +GP D Sbjct: 64 TITDDKLCPICKDSNRANGQIMVVEDPRDMAAYEKTKEFKGLYHILHGAISPMMGVGPSD 123 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I+ L+ERI+ + I E+I A + IEG+ TA YI LK + +KITR+A+G+P+G +L+ Sbjct: 124 IKIKELLERIQKEAIEEVIIATNPNIEGEATAMYISKLLKPLGIKITRIAHGVPVGGDLE 183 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D+ T+ A+ R + Sbjct: 184 YVDEITLTRALEGRREM 200 >gi|92113584|ref|YP_573512.1| recombination protein RecR [Chromohalobacter salexigens DSM 3043] gi|122420126|sp|Q1QXJ5|RECR_CHRSD RecName: Full=Recombination protein recR gi|91796674|gb|ABE58813.1| recombination protein RecR [Chromohalobacter salexigens DSM 3043] Length = 203 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 80/193 (41%), Positives = 118/193 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ L++ L +PG GP++A+R LHL+++ L A+ V C C Sbjct: 3 FSPLVDQLLETLRVLPGVGPKTAQRMALHLLERDRDGGRRLVAALGEALEHVGYCQRCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T C+IC D +RD ++ VVE AD+ A+E++ LY VL G LSPLD IGPEDI Sbjct: 63 LAETPLCSICEDARRDEGLLCVVESPADMLAIEQAGGFRGLYFVLHGHLSPLDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L ER+ + E+I A + T+EG+ TAHYI ++L+G V+++RLAYG+PMG EL+Y Sbjct: 123 GLDQLDERLAGGSVEEVILATNPTVEGEATAHYIAEQLRGTGVRLSRLAYGVPMGGELEY 182 Query: 186 LDDGTIFEAIRSR 198 +D GT+ A R Sbjct: 183 VDGGTLSRAFNGR 195 >gi|148258529|ref|YP_001243114.1| recombination protein RecR [Bradyrhizobium sp. BTAi1] gi|172047315|sp|A5ESR4|RECR_BRASB RecName: Full=Recombination protein recR gi|146410702|gb|ABQ39208.1| DNA replication and repair protein RecR [Bradyrhizobium sp. BTAi1] Length = 199 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 112/197 (56%), Positives = 152/197 (77%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + G EIE LI++LAR+PG GPRSARRA LHL+KK+E L+ PLA AM ++ +C Sbjct: 1 MAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKREALMVPLASAMQVAIERIQVCKT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+DT PC +C D +RD ++I+VV DVADLWALER+KA N YHVLGG+LSPLD +GP Sbjct: 61 CGNIDTQSPCTVCTDPRRDPAMIVVVADVADLWALERAKASNGRYHVLGGTLSPLDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I +L++R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G E Sbjct: 121 QDLTIDALVQRAHAPEVSEIILALNATVDGQTTAHYITDLLQEANVKVTRLAHGVPVGGE 180 Query: 183 LDYLDDGTIFEAIRSRT 199 LDYLD+GT+ A+R RT Sbjct: 181 LDYLDEGTLSAAMRQRT 197 >gi|158337044|ref|YP_001518219.1| recombination protein RecR [Acaryochloris marina MBIC11017] gi|189039775|sp|B0C882|RECR_ACAM1 RecName: Full=Recombination protein recR gi|158307285|gb|ABW28902.1| recombination protein RecR [Acaryochloris marina MBIC11017] Length = 200 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 121/200 (60%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + + L++ L R+PG GP+SA+R LHL+K+ + LA A+ +V CS Sbjct: 1 MSTVYTRPLARLVEQLQRLPGIGPKSAQRLALHLLKRPTAEVEALANALIEAKQQVGFCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C ++ C IC RD +VI VV D D+ ALE+++ YHVLGG +SP+D IG Sbjct: 61 VCFHLSADPVCDICRAPSRDKTVICVVADSRDVIALEKTREFKGQYHVLGGLISPMDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+ + +Q LI R+ K +E+I AI+ ++EG+TT Y+ LK ++TR+A+G+PMG Sbjct: 121 PDQLNVQPLIRRVHQTKTQEVILAINPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGG 179 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 180 DLEYADEVTLARALEGRRDL 199 >gi|269955080|ref|YP_003324869.1| recombination protein RecR [Xylanimonas cellulosilytica DSM 15894] gi|269303761|gb|ACZ29311.1| recombination protein RecR [Xylanimonas cellulosilytica DSM 15894] Length = 202 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 119/191 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +++LI L R+PG GP+SA+R HL+ + LA+A+ + +V C +CGNV Sbjct: 8 AVQDLIDELGRLPGVGPKSAQRIAFHLLAADAGDVRRLADALIEVKARVRFCEVCGNVAE 67 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C +C+D +R VI VVE+ D+ A+ER++ YHVLGG+++P++ +GP+D+ I+ Sbjct: 68 AERCRVCVDPRRSDDVICVVEEPKDVVAIERTREFRGRYHVLGGAINPIENVGPDDLRIK 127 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ +++E+I A +EG+ TA Y+ + + V ++RLA G+P+G +L+Y D+ Sbjct: 128 DLLSRLADGRVQEVILATDPNVEGEATATYLARLIGPMGVTVSRLASGLPVGGDLEYADE 187 Query: 189 GTIFEAIRSRT 199 T+ A R Sbjct: 188 VTLGRAFEGRR 198 >gi|238926313|ref|ZP_04658073.1| recombination protein RecR [Selenomonas flueggei ATCC 43531] gi|238885717|gb|EEQ49355.1| recombination protein RecR [Selenomonas flueggei ATCC 43531] Length = 198 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 119/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ L +PG G ++A R H++ + LA A+ K+ CS+C N+ Sbjct: 6 PLTQLIEQLRALPGIGAKTATRLAYHILDMDMERARRLAAAITGAKEKIGFCSVCFNLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 +DPCA+C ++RD + I VVE D+ A+ER + +YHVL G+LSPL+ +GP DI I+ Sbjct: 66 SDPCAVCTAEKRDHTTICVVEQPQDVAAMERMNDYDGVYHVLHGALSPLEGVGPNDIRIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R + I+E+I A + +EG+ TA YI LK + +++TR+A+G+P+G +L+Y D+ Sbjct: 126 ELVLRAGKEDIQEVIIATNPNVEGEATAMYIAKLLKPMGIRVTRIAHGLPVGGDLEYADE 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 186 VTLSRAMENRREI 198 >gi|146296606|ref|YP_001180377.1| recombination protein RecR [Caldicellulosiruptor saccharolyticus DSM 8903] gi|172046023|sp|A4XJV1|RECR_CALS8 RecName: Full=Recombination protein recR gi|145410182|gb|ABP67186.1| DNA replication and repair protein RecR [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 199 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 119/199 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ L ++PG G ++A+R +++ K + + LAEA+ + N LC I Sbjct: 1 MQAKENAISKLIQQLEKLPGIGQKTAQRLAFYIINMKNEDVKALAEAILSAKNSTKLCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N D C IC D +RD S+I VVE+ D+ ALE+ K LYHVL G++SPL P Sbjct: 61 CCNFTEGDICHICSDDKRDRSIICVVEEPQDVVALEKVKEYKGLYHVLHGAISPLKGKYP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I L++R+ ++E+I A + ++G+ TA Y+ +K + +K+TR+A GIP+G + Sbjct: 121 EQLTIDVLLKRLADTNVKEVIIATNPDVDGEATASYLARLIKPMGIKVTRIARGIPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 ++Y D+ TI +AI R + Sbjct: 181 IEYADEVTILKAIEGRKEI 199 >gi|260437832|ref|ZP_05791648.1| recombination protein RecR [Butyrivibrio crossotus DSM 2876] gi|292809857|gb|EFF69062.1| recombination protein RecR [Butyrivibrio crossotus DSM 2876] Length = 198 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 G ++ LI+ L+ +PG G ++A+R H++ E+ LA+A+ + + + C Sbjct: 1 MDYYGSQLSRLIEELSALPGVGAKTAQRLAFHIINMPEERADGLAKAIVDAKHNIRYCKT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC + +R+ VI+VVE+V DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CQTLTDRDECNICGNPERNHKVIMVVENVRDLVAYEKTGKYKGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI I+ L+ R+ + E+I A ++++EG+ TA Y+ +K +K+TR+A G+P+G + Sbjct: 121 NDIKIKELLVRL-QGDVDEVIIATNSSLEGEATAMYLSKLIKPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|309813068|ref|ZP_07706794.1| recombination protein RecR [Dermacoccus sp. Ellin185] gi|308432952|gb|EFP56858.1| recombination protein RecR [Dermacoccus sp. Ellin185] Length = 202 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 116/192 (60%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +++LI L R+PG GP+SA+R HL++ + LAE + + V C +C NV T Sbjct: 9 VQDLIDELGRLPGVGPKSAQRIAFHLLEADADDVQRLAEVLLKVKETVHFCEVCFNVAET 68 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C +C D QR+ ++I +VE+ D+ A+ER++ YHVLGG+L+P++ +GP D+ I Sbjct: 69 NLCRVCADPQRNPALICIVEESKDVVAIERTREFRGRYHVLGGALNPIEGVGPGDLHITE 128 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ + E+I A + G+ TA Y+ + + V ++RLA G+P+G +L+Y D+ Sbjct: 129 LMARLSDTSLEEIIIATNPNHTGEATASYLARLIGPMGVTVSRLASGLPVGGDLEYADEV 188 Query: 190 TIFEAIRSRTVL 201 T+ A R VL Sbjct: 189 TLGRAFEGRRVL 200 >gi|269976048|ref|ZP_06183052.1| recombination protein RecR [Mobiluncus mulieris 28-1] gi|269935876|gb|EEZ92406.1| recombination protein RecR [Mobiluncus mulieris 28-1] Length = 201 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 125/200 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 +I ++NLI L ++PG GP+SA+R +++ + + LA + + + C Sbjct: 1 MSQIFTDALQNLIDALGKMPGVGPKSAQRIAFWVLQTDPENIKNLAATLQTAKDTIRFCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CGN+ C IC+D +RD S+I VVE+ D+ +LE++++ LYHVLGG++ P++ IG Sbjct: 61 TCGNITENPVCQICVDPRRDRSLICVVEEAKDIASLEKTRSYRGLYHVLGGAIDPINGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+ + I+SL+ER++ +++E+I A + +EG+ TA Y+ L + + +RLA G+P+GS Sbjct: 121 PDQLRIKSLMERLQDAEVKEVIIATNPNVEGEATATYLSRLLATLQIPASRLASGLPVGS 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 181 DLEYADEVTLSRALEGRHSL 200 >gi|227876481|ref|ZP_03994593.1| recombination protein RecR [Mobiluncus mulieris ATCC 35243] gi|306817440|ref|ZP_07451185.1| recombination protein R [Mobiluncus mulieris ATCC 35239] gi|307700518|ref|ZP_07637554.1| recombination protein RecR [Mobiluncus mulieris FB024-16] gi|227843022|gb|EEJ53219.1| recombination protein RecR [Mobiluncus mulieris ATCC 35243] gi|304649881|gb|EFM47161.1| recombination protein R [Mobiluncus mulieris ATCC 35239] gi|307614325|gb|EFN93558.1| recombination protein RecR [Mobiluncus mulieris FB024-16] Length = 201 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 125/200 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 +I ++NLI L ++PG GP+SA+R +++ + + LA + + + C Sbjct: 1 MSQIFTDALQNLIDALGKMPGVGPKSAQRIAFWVLQTDPENIKNLAATLQTAKDTIRFCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CGN+ C IC+D +RD S+I VVE+ D+ +LE++++ LYHVLGG++ P++ IG Sbjct: 61 TCGNITENPVCQICVDPRRDRSLICVVEEAKDIASLEKTRSYRGLYHVLGGAIDPINGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+ + I+SL+ER++ K++E+I A + +EG+ TA Y+ L + + +RLA G+P+GS Sbjct: 121 PDQLRIKSLMERLQDAKVKEVIIATNPNVEGEATATYLSRLLATLQIPASRLASGLPVGS 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 181 DLEYADEVTLSRALEGRHSL 200 >gi|150398621|ref|YP_001329088.1| recombination protein RecR [Sinorhizobium medicae WSM419] gi|166221968|sp|A6UF23|RECR_SINMW RecName: Full=Recombination protein recR gi|150030136|gb|ABR62253.1| recombination protein RecR [Sinorhizobium medicae WSM419] Length = 201 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 129/189 (68%), Positives = 163/189 (86%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHLVKKKEQLLGPLAEAM + KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D++RD +VIIVVEDVADLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SCCGNVDTIDPCTVCGDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I++L++R+ +RELI A++AT+EGQTTAHYI D+L+G++V+ITRLA+G+P+G Sbjct: 121 GPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG 180 Query: 181 SELDYLDDG 189 ELDYLD+G Sbjct: 181 GELDYLDEG 189 >gi|304393794|ref|ZP_07375719.1| recombination protein RecR [Ahrensia sp. R2A130] gi|303293993|gb|EFL88368.1| recombination protein RecR [Ahrensia sp. R2A130] Length = 209 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 118/196 (60%), Positives = 158/196 (80%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +G+EI+ LI++LAR+PG GPRSARRA LHL+K+K+ L+ PLA A+ + KV CS CGN Sbjct: 13 SGQEIDRLIQLLARLPGLGPRSARRAALHLIKRKDALMSPLASAINDAVEKVGECSTCGN 72 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVN-ALYHVLGGSLSPLDRIGPED 124 +DT++PCA+C D +RD S IIVVEDV+DLWALER+ +N A YHVLGG LSPLD IGPED Sbjct: 73 IDTSNPCALCRDPRRDGSTIIVVEDVSDLWALERAAVMNNAKYHVLGGVLSPLDGIGPED 132 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ER+ + EL+ A++AT+EGQTTAHYI D+L+G++V I+RLA+G+P+G ELD Sbjct: 133 LSISQLVERVSSGAVSELVIAVNATVEGQTTAHYITDQLRGMEVNISRLAHGVPVGGELD 192 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ A+R+RT Sbjct: 193 YLDEGTLSAAMRARTK 208 >gi|291165758|gb|EFE27806.1| recombination protein RecR [Filifactor alocis ATCC 35896] Length = 199 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 121/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I+ LI+ L ++PG G ++A+R +++ + + LA AM N + C + Sbjct: 1 MQHYSNHIDQLIERLGKLPGIGYKTAQRLAFYIINMPKDEVIGLANAMQNAKEHITYCEV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ +PC+IC + RD++ I VVED D+ A+ER++ + YHVL G++SP I P Sbjct: 61 CYNISDANPCSICDSKTRDSATICVVEDPRDVAAMERTREYHGKYHVLHGTISPSQAITP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I I+ L+ R+ +I+E+I A + TI+G+ TA Y+ +K +K+TR+A+G+P+G+ Sbjct: 121 DMIRIKELMSRLHDPEIKEIIIATNTTIDGEATAMYLARLIKPFGIKVTRIAHGLPVGAN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L++ DD TI A+ R L Sbjct: 181 LEFADDVTIGRALEGRREL 199 >gi|152996551|ref|YP_001341386.1| recombination protein RecR [Marinomonas sp. MWYL1] gi|150837475|gb|ABR71451.1| recombination protein RecR [Marinomonas sp. MWYL1] Length = 197 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ LI+ L +PG GPRSA++ L+L+++ Q LA A+ +KV CS C Sbjct: 1 MFSPLIKELIESLRCLPGVGPRSAQKMALYLLERDHQGADRLANALREALDKVGRCSSCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC D +RDA + +VE AD+ A+E + + + Y VL G LSP+D IGPE+ Sbjct: 61 TLTEESECGICTDPERDAKHLCIVETPADVVAIESAGSFSGRYFVLLGHLSPIDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L ++ ++ E I A ++T+EG+ T HYI +KLK +++ ++R+A+G+PMG EL+ Sbjct: 121 LGLDRLEALVQHNEVEEAIIATNSTVEGEATCHYIAEKLKTLNINVSRIAHGVPMGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A+ R L Sbjct: 181 YVDGNTLALALEGRKKL 197 >gi|39933694|ref|NP_945970.1| recombination protein RecR [Rhodopseudomonas palustris CGA009] gi|192289051|ref|YP_001989656.1| recombination protein RecR [Rhodopseudomonas palustris TIE-1] gi|73621510|sp|Q6NC55|RECR_RHOPA RecName: Full=Recombination protein recR gi|229470341|sp|B3QCG7|RECR_RHOPT RecName: Full=Recombination protein recR gi|39647540|emb|CAE26061.1| putative recombination protein recR [Rhodopseudomonas palustris CGA009] gi|192282800|gb|ACE99180.1| recombination protein RecR [Rhodopseudomonas palustris TIE-1] Length = 200 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 110/194 (56%), Positives = 152/194 (78%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI++LAR+PG GPRSARRA LHL+KK++ L+ PLA A+ +K+ +CS CGN Sbjct: 5 AGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMAPLASALQVAIDKIEVCSTCGN 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +D+ +PC +C D +RD+S+I+VV DVADLWALER+ A N YHVLG +LSPLD +GPED+ Sbjct: 65 IDSQNPCTVCTDPRRDSSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGVGPEDL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L++R + E+I A++AT++GQTTAHY+ D L+ +VK+TRLA+G+P+G ELDY Sbjct: 125 TIDALVKRAHDPGVAEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVGGELDY 184 Query: 186 LDDGTIFEAIRSRT 199 LD+GT+ A+R RT Sbjct: 185 LDEGTLSAAMRQRT 198 >gi|154250714|ref|YP_001411538.1| recombination protein RecR [Parvibaculum lavamentivorans DS-1] gi|171769553|sp|A7HPP8|RECR_PARL1 RecName: Full=Recombination protein recR gi|154154664|gb|ABS61881.1| recombination protein RecR [Parvibaculum lavamentivorans DS-1] Length = 199 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 111/198 (56%), Positives = 150/198 (75%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +TG EIE LI +L+++PG GPRSARRA L L+KKKE LLGPLA AM + K +CS Sbjct: 1 MAVTGPEIERLIALLSKLPGLGPRSARRAVLQLIKKKETLLGPLAAAMTDAMAKARICSA 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGNVDT DPCAIC D+ RD ++ +VE+V DLWALER+ A YHVLGG LS LD +GP Sbjct: 61 CGNVDTQDPCAICADELRDPHILCIVEEVGDLWALERAGAHKGRYHVLGGVLSALDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I L+ER+ ++RE++ A++AT++GQTTAHYI D++ G+ + ++RLA+G+P+G E Sbjct: 121 DDLNIGRLVERLTGGEVREVVLAMNATVDGQTTAHYITDRISGLGISVSRLAHGVPVGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 LDYLDDGT+ A++SR Sbjct: 181 LDYLDDGTLAAAMKSRRP 198 >gi|288959355|ref|YP_003449696.1| recombination protein [Azospirillum sp. B510] gi|288911663|dbj|BAI73152.1| recombination protein [Azospirillum sp. B510] Length = 197 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 106/197 (53%), Positives = 146/197 (74%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE LI++L+++PG GPRSARRA LHL+K+++ LL PL+EAMA + CS+CG Sbjct: 1 MIGPEIERLIQLLSKLPGLGPRSARRAALHLMKRRDSLLVPLSEAMAAAGESIRACSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+D+ DPC +C D RD SVI VVED DLWALER++A YHVLGG LS L +GP+D Sbjct: 61 NLDSRDPCTVCADPARDRSVICVVEDAGDLWALERTRAFRGTYHVLGGLLSALQGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + L ER + +RE+I A++AT++GQTTAH + D+L DV ++RLA+G+P+G ELD Sbjct: 121 LNLAGLAERAKDPAVREIILALNATVDGQTTAHVVTDRLTDSDVSVSRLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLDDGT+ A+++R L Sbjct: 181 YLDDGTLTAALKARRPL 197 >gi|257879312|ref|ZP_05658965.1| recombination protein recR [Enterococcus faecium 1,230,933] gi|257881872|ref|ZP_05661525.1| recombination protein recR [Enterococcus faecium 1,231,502] gi|257885060|ref|ZP_05664713.1| recombination protein recR [Enterococcus faecium 1,231,501] gi|257890138|ref|ZP_05669791.1| recombination protein recR [Enterococcus faecium 1,231,410] gi|257893466|ref|ZP_05673119.1| recombination protein recR [Enterococcus faecium 1,231,408] gi|258615718|ref|ZP_05713488.1| recombination protein RecR [Enterococcus faecium DO] gi|260558754|ref|ZP_05830943.1| recombination protein RecR [Enterococcus faecium C68] gi|261207349|ref|ZP_05922036.1| recombination protein RecR [Enterococcus faecium TC 6] gi|289566856|ref|ZP_06447265.1| recombination protein RecR [Enterococcus faecium D344SRF] gi|293550623|ref|ZP_06673291.1| recombination protein RecR [Enterococcus faecium E1039] gi|293559586|ref|ZP_06676120.1| recombination protein RecR [Enterococcus faecium E1162] gi|294615744|ref|ZP_06695594.1| recombination protein RecR [Enterococcus faecium E1636] gi|294617669|ref|ZP_06697296.1| recombination protein RecR [Enterococcus faecium E1679] gi|294621755|ref|ZP_06700915.1| recombination protein RecR [Enterococcus faecium U0317] gi|257813540|gb|EEV42298.1| recombination protein recR [Enterococcus faecium 1,230,933] gi|257817530|gb|EEV44858.1| recombination protein recR [Enterococcus faecium 1,231,502] gi|257820912|gb|EEV48046.1| recombination protein recR [Enterococcus faecium 1,231,501] gi|257826498|gb|EEV53124.1| recombination protein recR [Enterococcus faecium 1,231,410] gi|257829845|gb|EEV56452.1| recombination protein recR [Enterococcus faecium 1,231,408] gi|260075213|gb|EEW63526.1| recombination protein RecR [Enterococcus faecium C68] gi|260078409|gb|EEW66113.1| recombination protein RecR [Enterococcus faecium TC 6] gi|289161344|gb|EFD09235.1| recombination protein RecR [Enterococcus faecium D344SRF] gi|291591395|gb|EFF23054.1| recombination protein RecR [Enterococcus faecium E1636] gi|291596076|gb|EFF27342.1| recombination protein RecR [Enterococcus faecium E1679] gi|291598642|gb|EFF29699.1| recombination protein RecR [Enterococcus faecium U0317] gi|291603244|gb|EFF33428.1| recombination protein RecR [Enterococcus faecium E1039] gi|291606462|gb|EFF35862.1| recombination protein RecR [Enterococcus faecium E1162] Length = 198 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN Sbjct: 3 YPEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICRNPSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLLKAVEGRREL 198 >gi|257069943|ref|YP_003156198.1| DNA replication and repair protein RecR [Brachybacterium faecium DSM 4810] gi|256560761|gb|ACU86608.1| DNA replication and repair protein RecR [Brachybacterium faecium DSM 4810] Length = 197 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 114/196 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + + LAE + + + V C ICG Sbjct: 1 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLDADDAAVRRLAEVLIQVKDTVRFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +R VI VVE+ D+ A+E+ + YHVLGG++ P+ +GP D Sbjct: 61 NVSAEEKCRICTDPRRTDEVICVVEESKDIVAIEKIREFKGRYHVLGGAIDPIGGVGPND 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ + E+I A+ IEG+ TA Y+ L +++ +TRLA G+P+G +LD Sbjct: 121 LRITQLMSRLGSGETTEVILALDPNIEGEATAAYLSRLLGPMELTVTRLASGLPVGGDLD 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEMTLGRAFLGRRS 196 >gi|225351266|ref|ZP_03742289.1| hypothetical protein BIFPSEUDO_02858 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158722|gb|EEG71964.1| hypothetical protein BIFPSEUDO_02858 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 200 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + K+ C Sbjct: 1 MALAYDG-AIQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLIDAITEVKEKIRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PC +C D +RD SVI VVE+ D+ ++ER++ LYHVLGG ++P+ + Sbjct: 60 DICGNVCETSPCPVCADPRRDHSVICVVEESKDVMSIERTREYRGLYHVLGGVINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I LIER++ ++ E+I A++ +EG+ T ++ L D+K+TRLA G+P+G Sbjct: 120 QPSDLNIAKLIERLKDSEVAEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L+Y D+ T+ A+ R Sbjct: 180 GDLEYADEITLGRALAGRR 198 >gi|229823581|ref|ZP_04449650.1| hypothetical protein GCWU000282_00879 [Catonella morbi ATCC 51271] gi|229787025|gb|EEP23139.1| hypothetical protein GCWU000282_00879 [Catonella morbi ATCC 51271] Length = 198 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 118/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R +++ KE + A+A+ + + C CGN Sbjct: 3 YPAPIAKLINSFTKLPGIGAKTAARLAFYVLDMKESDVTEFAQALIQVKRDLRFCPTCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + ++ C IC D RD+ ++VVED D+ ++ER + LYHVL G LSP++ GPED+ Sbjct: 63 ITDSELCVICSDPSRDSKTVLVVEDARDVMSMERMHEYHGLYHVLHGVLSPMEGTGPEDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL+ R++ +I E+I A +AT EG+ TA Y+ LK +K+TRLA+G+ +GS+++Y Sbjct: 123 NIPSLLRRLQETEIEEVIVATNATAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+F AI R L Sbjct: 183 ADEMTLFRAIEGRREL 198 >gi|212717035|ref|ZP_03325163.1| hypothetical protein BIFCAT_01982 [Bifidobacterium catenulatum DSM 16992] gi|212660023|gb|EEB20598.1| hypothetical protein BIFCAT_01982 [Bifidobacterium catenulatum DSM 16992] Length = 201 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +L+ ++ L +A+ + K+ C Sbjct: 1 MALAYDG-AIQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLVDAITEVKEKIRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PC IC+D +RD SVI VVE+ D+ ++ER++ LYHVLGG ++P+ + Sbjct: 60 DICGNVCETSPCPICVDPRRDHSVICVVEEPKDVMSIERTREYRGLYHVLGGVINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I LIER++ ++ E+I A++ +EG+ T ++ L D+ +TRLA G+P+G Sbjct: 120 QPSDLNIAKLIERLKDSEVTEVILALNPNVEGEATTSFLSQLLSQTDITVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L+Y D+ T+ A+ R Sbjct: 180 GDLEYADEITLGRALAGRR 198 >gi|332710481|ref|ZP_08430428.1| DNA replication and repair protein RecR [Lyngbya majuscula 3L] gi|332350812|gb|EGJ30405.1| DNA replication and repair protein RecR [Lyngbya majuscula 3L] Length = 198 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG GP++A+R LH++K+ + LA+A+ +V C +C Sbjct: 2 VYTRPLARLIEELQRLPGVGPKTAQRLALHILKRPTPEVKALAQALVEAKQQVGFCRVCF 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + RD I VV D D+ A+E+++ YHVLGG +SP+D IGPE Sbjct: 62 HLSAEPVCQICRNSNRDEKTICVVADSRDVIAIEKTREYRGKYHVLGGVISPMDGIGPEQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + IQ L++R+ K I+E+I AI+ ++EG+TT YI ++ K+TR+A+G+PMG +L+ Sbjct: 122 LHIQQLVQRVSQKTIQEVILAINPSVEGETTTLYIGQLIRPF-TKVTRIAFGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 181 YADEVTLARALEGRREL 197 >gi|139438750|ref|ZP_01772234.1| Hypothetical protein COLAER_01237 [Collinsella aerofaciens ATCC 25986] gi|133775830|gb|EBA39650.1| Hypothetical protein COLAER_01237 [Collinsella aerofaciens ATCC 25986] Length = 198 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ L+ L R+PG GP+SA+R +L++ + LAEA+ + +V CS C N Sbjct: 3 ANHSLQKLLDELGRLPGIGPKSAQRIAYYLLEADAEEARRLAEAILEVKQEVHFCSRCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 T D C+IC D RD + I VV + D+ A+ER+ + + LYHVLGG +SP+D+IGPE + Sbjct: 63 YATADECSICQDPMRDTTRICVVGEPRDVQAIERTGSYHGLYHVLGGVISPMDKIGPEQL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ + I E+I A + IEG+TTA Y+ +K + V+++RLA G+P+G +L+Y Sbjct: 123 HIRELLARLGHEDIHEVIIATNPNIEGETTASYLARTIKPLGVEVSRLASGLPVGGDLEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI +R + Sbjct: 183 ADELTLGRAIEARRAI 198 >gi|302870392|ref|YP_003839029.1| recombination protein RecR [Micromonospora aurantiaca ATCC 27029] gi|315503331|ref|YP_004082218.1| recombination protein recr [Micromonospora sp. L5] gi|302573251|gb|ADL49453.1| recombination protein RecR [Micromonospora aurantiaca ATCC 27029] gi|315409950|gb|ADU08067.1| recombination protein RecR [Micromonospora sp. L5] Length = 197 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 117/195 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R H++ + LA A+ + + V C+ C Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLAGALRKVKDLVRFCTTCY 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++ Sbjct: 61 NVAESEQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ ++RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+ Sbjct: 121 LRIRELMTRLGGGEVRELILATDPNTEGEATATYLALMVKPMGIAVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGRR 195 >gi|257869780|ref|ZP_05649433.1| recombination protein recR [Enterococcus gallinarum EG2] gi|257803944|gb|EEV32766.1| recombination protein recR [Enterococcus gallinarum EG2] Length = 198 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN Sbjct: 3 YPEPIARLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI Sbjct: 63 ITEGDPCEICSDPSRDKGTILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIAPLIQRLHDDQVKEVIIATNATTEGEATAIYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLLKAVEGRREL 198 >gi|313906300|ref|ZP_07839643.1| recombination protein RecR [Eubacterium cellulosolvens 6] gi|313468856|gb|EFR64215.1| recombination protein RecR [Eubacterium cellulosolvens 6] Length = 199 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI+ + R+PG GP++A+R H++ E+ + LA ++ V C I Sbjct: 1 MEYYSDHIGRLIEQMGRLPGIGPKTAQRLAFHIIGMSEEHVKELASSITEAKANVRYCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + + C IC + R+ I+VVE+ DL A E+++ + +YHVL G++SP+ IGP Sbjct: 61 CGTLTDQEICPICANPSRNHREIMVVENSRDLAAYEKTQKYDGVYHVLNGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L++R+ + E+I A ++++EG+TTA YI ++ +K+TR+A G+P+G + Sbjct: 121 DDIRLKELMQRL-QDDVDEVIIATNSSLEGETTAMYISKLIRPTGIKVTRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|283782640|ref|YP_003373394.1| recombination protein RecR [Gardnerella vaginalis 409-05] gi|297243103|ref|ZP_06927041.1| recombination protein RecR [Gardnerella vaginalis AMD] gi|283442128|gb|ADB14594.1| recombination protein RecR [Gardnerella vaginalis 409-05] gi|296889314|gb|EFH28048.1| recombination protein RecR [Gardnerella vaginalis AMD] Length = 202 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 119/192 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I LI+ +++PG GP+ A+R +L+ ++ + L +A+ N+ V C +CGNV Sbjct: 10 AIGRLIEAFSKLPGIGPKGAQRIAFYLLSSSDKDVQELIDAINNMKESVRFCDVCGNVCE 69 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC +C D +RD S I VVE+ D+ ++ER+ + +YHVLGG+++P+ +GP D+ I Sbjct: 70 QSPCIVCADPRRDHSKICVVEEPKDIMSIERTHEYSGVYHVLGGAINPMANVGPGDLAIT 129 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ER++ K++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G +L+Y D+ Sbjct: 130 QLLERLKDAKVQEIILALDPDIEGEATVTYLARLLDPLGIKVTRLASGLPVGGDLEYADE 189 Query: 189 GTIFEAIRSRTV 200 T+ A R Sbjct: 190 ITLGRAFSGRQS 201 >gi|257888431|ref|ZP_05668084.1| recombination protein recR [Enterococcus faecium 1,141,733] gi|257897194|ref|ZP_05676847.1| recombination protein recR [Enterococcus faecium Com12] gi|257899192|ref|ZP_05678845.1| recombination protein recR [Enterococcus faecium Com15] gi|293379611|ref|ZP_06625748.1| recombination protein RecR [Enterococcus faecium PC4.1] gi|293572058|ref|ZP_06683069.1| recombination protein RecR [Enterococcus faecium E980] gi|257824485|gb|EEV51417.1| recombination protein recR [Enterococcus faecium 1,141,733] gi|257833759|gb|EEV60180.1| recombination protein recR [Enterococcus faecium Com12] gi|257837104|gb|EEV62178.1| recombination protein recR [Enterococcus faecium Com15] gi|291607843|gb|EFF37154.1| recombination protein RecR [Enterococcus faecium E980] gi|292641760|gb|EFF59933.1| recombination protein RecR [Enterococcus faecium PC4.1] Length = 198 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN Sbjct: 3 YPEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC + RD S+I+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICRNPSRDRSIILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLLKAVEGRREL 198 >gi|85712671|ref|ZP_01043717.1| Recombinational DNA repair protein [Idiomarina baltica OS145] gi|85693521|gb|EAQ31473.1| Recombinational DNA repair protein [Idiomarina baltica OS145] Length = 202 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + I+ L+ L R+PG G ++A+R HL+++ + LA+++ N +V C Sbjct: 1 MSEGISPAIDRLVDDLKRLPGVGKKTAQRMAFHLLERDREGAQRLADSLHNAVERVGHCQ 60 Query: 62 ICGNVDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + C IC + R + + VVE AD+ A+E++ Y VL G LSPLD I Sbjct: 61 QCRTLTEEPLCRICANPARSEQGTLCVVETPADVLAIEQTSQFKGRYFVLMGHLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDIG+ L +++ I E+I A + T+EG TAHYI D + ++V +R+A+G+P+G Sbjct: 121 GPEDIGLDELEAQLKSAVIEEIILATNPTVEGDATAHYIADIAESLNVNTSRIAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL Y+D T+ A R Sbjct: 181 GELGYVDQATLGHAFTGRKK 200 >gi|226325910|ref|ZP_03801428.1| hypothetical protein COPCOM_03723 [Coprococcus comes ATCC 27758] gi|225205452|gb|EEG87806.1| hypothetical protein COPCOM_03723 [Coprococcus comes ATCC 27758] Length = 198 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+R+PG G +SA R H++ ++ + LA + + N V C Sbjct: 1 MDYYSSQISKLIEELSRLPGIGAKSAGRLAFHIINMPKEQVEQLAATLVDARNNVRYCKQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC ++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDKELCPICASEERDHKTIMVVENSRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 GDIRLKELMERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTAL 198 >gi|325570728|ref|ZP_08146454.1| recombination protein R [Enterococcus casseliflavus ATCC 12755] gi|325156574|gb|EGC68754.1| recombination protein R [Enterococcus casseliflavus ATCC 12755] Length = 200 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + KE+++ A+++ ++ + CSICGN Sbjct: 5 YPEPIARLIDSYMKLPGIGQKTATRLAFYTIDMKEEVVNEFAKSLLSVKRDLHFCSICGN 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI Sbjct: 65 ITEEDPCEICSDPTRDKETILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDI 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 125 NIASLIQRLHDDQVKEVIIATNATTEGEATAMYMSRLIKPAGIKVTRLAHGLSVGSDIEY 184 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 185 ADEVTLLKAVEGRREL 200 >gi|153854736|ref|ZP_01995970.1| hypothetical protein DORLON_01968 [Dorea longicatena DSM 13814] gi|149752643|gb|EDM62574.1| hypothetical protein DORLON_01968 [Dorea longicatena DSM 13814] Length = 198 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ LI+ L+ +PG G +SA R HL+ + LA M + C Sbjct: 1 MDYYSNQMSKLIEELSCLPGIGAKSAARLAFHLIHMPVDDVKRLASTMVEARENIKYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CYTLTDQELCPICSNSNRDHQTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LIER+ ++E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 EDIKLKELIERL-QGDVKEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|171741490|ref|ZP_02917297.1| hypothetical protein BIFDEN_00575 [Bifidobacterium dentium ATCC 27678] gi|283455170|ref|YP_003359734.1| recombination protein RecR [Bifidobacterium dentium Bd1] gi|306823769|ref|ZP_07457143.1| recombination protein R [Bifidobacterium dentium ATCC 27679] gi|309802080|ref|ZP_07696190.1| recombination protein RecR [Bifidobacterium dentium JCVIHMP022] gi|171277104|gb|EDT44765.1| hypothetical protein BIFDEN_00575 [Bifidobacterium dentium ATCC 27678] gi|283101804|gb|ADB08910.1| recombination protein RecR [Bifidobacterium dentium Bd1] gi|304552767|gb|EFM40680.1| recombination protein R [Bifidobacterium dentium ATCC 27679] gi|308221281|gb|EFO77583.1| recombination protein RecR [Bifidobacterium dentium JCVIHMP022] Length = 200 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI A +PG GP+ A+R +++ ++ L +A+ + KV C Sbjct: 1 MALAYDG-AIQRLIDAFAHLPGIGPKGAQRIAFYMLNASDEESQGLIDAITEVKEKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGNV T PC +C+D +RD SVI VVE+ D+ ++ER++ LYHVLGG+++P+ + Sbjct: 60 EICGNVCETSPCPVCVDPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I LIER++ +++E+I A++ +EG+ T ++ L D+K+TRLA G+P+G Sbjct: 120 QPSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLAQLLSQTDIKVTRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L+Y D+ T+ A+ R Sbjct: 180 GDLEYADEITLGRALAGRR 198 >gi|315650375|ref|ZP_07903446.1| recombination protein R [Eubacterium saburreum DSM 3986] gi|315487302|gb|EFU77613.1| recombination protein R [Eubacterium saburreum DSM 3986] Length = 198 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ L+++PG G +SA+R H++ + + L++A+ + V C+ Sbjct: 1 MDYYSSHISKLIEELSKLPGVGAKSAQRLAFHIIGMSSEQVESLSDAIKDAKGNVHYCNE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC +++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDGDICPICANERRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ LI+R+ + E+I A ++T+EG+TTA YI +K ++++R+A G+P+G + Sbjct: 121 ADIKLKELIKRL-EGDVNEVIIATNSTLEGETTAMYIAKLIKPTGIEVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 180 LEYIDEVTLLRALEGRRTL 198 >gi|145592781|ref|YP_001157078.1| recombination protein RecR [Salinispora tropica CNB-440] gi|145302118|gb|ABP52700.1| DNA replication and repair protein RecR [Salinispora tropica CNB-440] Length = 197 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 115/196 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R H++ + LA A+ + V C+ C Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLAGALRKVKELVRFCTSCY 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++ Sbjct: 61 NVAESEQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+ Sbjct: 121 LRVRELLTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGIAVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGRRT 196 >gi|257867901|ref|ZP_05647554.1| recombination protein recR [Enterococcus casseliflavus EC30] gi|257874230|ref|ZP_05653883.1| recombination protein recR [Enterococcus casseliflavus EC10] gi|257876794|ref|ZP_05656447.1| recombination protein recR [Enterococcus casseliflavus EC20] gi|257801984|gb|EEV30887.1| recombination protein recR [Enterococcus casseliflavus EC30] gi|257808394|gb|EEV37216.1| recombination protein recR [Enterococcus casseliflavus EC10] gi|257810960|gb|EEV39780.1| recombination protein recR [Enterococcus casseliflavus EC20] Length = 198 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + KE+++ A+++ ++ + CSICGN Sbjct: 3 YPEPIARLIDSYMKLPGIGQKTATRLAFYTIDMKEEVVNEFAKSLLSVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD I+VVE+ D+ ALE+ + + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICSDPTRDKETILVVEEPKDVMALEKVREYHGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIASLIQRLHDDQVKEVIIATNATTEGEATAMYMSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLLKAVEGRREL 198 >gi|238061525|ref|ZP_04606234.1| recombination protein recR [Micromonospora sp. ATCC 39149] gi|237883336|gb|EEP72164.1| recombination protein recR [Micromonospora sp. ATCC 39149] Length = 197 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 116/195 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R H++ + LA A+ + + V C+ C Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADINRLAGALRKVKDLVRFCTTCY 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++ Sbjct: 61 NVAESEQCRICRDPRRGDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+ Sbjct: 121 LRIRELMTRLSGGAVRELILATDPNTEGEATATYLALMVKPMGISVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGRR 195 >gi|282877375|ref|ZP_06286198.1| recombination protein RecR [Prevotella buccalis ATCC 35310] gi|281300427|gb|EFA92773.1| recombination protein RecR [Prevotella buccalis ATCC 35310] Length = 203 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 128/200 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+++ +E + +++PG G ++A R LHL+++ + A A+A + +V C Sbjct: 1 MEQQYPSVLLEKAVNEFSKLPGIGRKTALRLVLHLLRQSNSDVEQFASAIAKVKQEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ D C IC D +RD S+I VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 QVCHNISDEDVCPICSDPRRDTSLICVVENIQDVMAVENTQQFRGLYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + IQSL++R+E + E+I A+S+T+EG TT YI KL +DVK++ +A GI +G Sbjct: 121 GPDQLEIQSLVQRVEQGGVSEVILALSSTMEGDTTNFYISRKLAPLDVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIVNRTP 200 >gi|167748330|ref|ZP_02420457.1| hypothetical protein ANACAC_03074 [Anaerostipes caccae DSM 14662] gi|167652322|gb|EDR96451.1| hypothetical protein ANACAC_03074 [Anaerostipes caccae DSM 14662] Length = 198 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L ++PG GP+SA R H++ + LAE++ + V C Sbjct: 1 MDYYSSQITKLIEELGKLPGIGPKSAGRLAFHIINMPLDQVKHLAESILDAKENVHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC +RD S I+VVE DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CCTLTDQDICPICSSSKRDHSTIMVVESTRDLMAYEKTGKYEGIYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R+ + ELI A ++++EG+TTA YI +K +K++++A G+P+G + Sbjct: 121 SDIRLKELMARL-QGDVNELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|268318152|ref|YP_003291871.1| recombination protein RecR [Rhodothermus marinus DSM 4252] gi|262335686|gb|ACY49483.1| recombination protein RecR [Rhodothermus marinus DSM 4252] Length = 215 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 126/215 (58%), Gaps = 16/215 (7%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 T +E L++ L R+P G ++A+R +++K + + LA+A+ + +V C+I Sbjct: 1 MSFTSPSVEALVEQLMRLPTVGRKTAQRLAAYILKMPREEVEALAQALLAVKERVRQCAI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C NV + CAIC +RD + I VVE+ +D+ ALER+ +YHVLGG +SPLD IGP Sbjct: 61 CFNVTDEEVCAICRSPRRDHTTICVVEEPSDVLALERTGEYRGVYHVLGGVISPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKK----------------IRELIFAISATIEGQTTAHYIMDKLKGI 166 +D+ I+ L+ R+ ++E+I A++ +EG TTA+Y+ LK + Sbjct: 121 DDLRIRELVARVAPANGDPERAALYPDGRIPRVQEVILALNPNVEGDTTAYYLAQLLKPL 180 Query: 167 DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 V++TR+A G+P+G +L+Y D+ T+ A+ R L Sbjct: 181 GVRVTRIARGLPIGGDLEYADEATLSRALEGRLAL 215 >gi|289643262|ref|ZP_06475387.1| recombination protein RecR [Frankia symbiont of Datisca glomerata] gi|289506902|gb|EFD27876.1| recombination protein RecR [Frankia symbiont of Datisca glomerata] Length = 200 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 115/197 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +++LI L R+PG GP+SA+R HL+ + LA + I +KV C Sbjct: 1 MTMYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLSADPVDVRRLAATLNEIKDKVRFCRT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C NV + C IC D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP Sbjct: 61 CFNVAQAELCRICADHRRDPAQICVVEEPKDVVAVERTREFRGRYHVLGGAINPIGGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I+ LI R+ + ELI A EG+ TA Y+ ++ + +K+TRLA G+PMG + Sbjct: 121 DDLHIRELIARLADGTVTELILATDPNTEGEVTASYLARQIAPMGLKVTRLASGLPMGGD 180 Query: 183 LDYLDDGTIFEAIRSRT 199 L++ D+ T+ A R Sbjct: 181 LEWADEVTLGRAFEGRR 197 >gi|57234634|ref|YP_181325.1| recombination protein RecR [Dehalococcoides ethenogenes 195] gi|123618834|sp|Q3Z8X4|RECR_DEHE1 RecName: Full=Recombination protein recR gi|57225082|gb|AAW40139.1| recombination protein RecR [Dehalococcoides ethenogenes 195] Length = 204 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 70/191 (36%), Positives = 115/191 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI L ++PG GP+SA+R +L++ E+ + L++ + +I N++ C IC NV Sbjct: 12 AVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEEQVLTLSDTIRSIKNQISQCRICFNVAD 71 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 ++ C IC + +R+A+ I VVE D+ ALE YHVL G++SP + I ++I I Sbjct: 72 SELCPICQNTKREANKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNIRIN 131 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y DD Sbjct: 132 ELMSRLNDGQVDEVILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEYADD 191 Query: 189 GTIFEAIRSRT 199 T+ A+ R Sbjct: 192 VTLSRAMEGRQ 202 >gi|298253201|ref|ZP_06976993.1| recombination protein RecR [Gardnerella vaginalis 5-1] gi|297532596|gb|EFH71482.1| recombination protein RecR [Gardnerella vaginalis 5-1] Length = 202 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 120/192 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I +LI+ +++PG GP+ A+R +L+ ++ + L +A+ N+ V C +CGNV Sbjct: 10 AIGHLIEAFSKLPGIGPKGAQRIAFYLLSSSDKDVQELIDAINNMKESVRFCDVCGNVCE 69 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC +C D +RD S I VVE+ D+ ++ER+ + +YHVLGG+++P+ +GP D+ I Sbjct: 70 QSPCIVCADPRRDHSKICVVEEPKDIMSIERTHEYSGVYHVLGGAINPMANVGPGDLAIT 129 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ER++ K++E+I A+ IEG+ T Y+ L + +K+TRLA G+P+G +L+Y D+ Sbjct: 130 QLLERLKDAKVQEIILALDPDIEGEATVTYLARLLDPLGIKVTRLASGLPVGGDLEYADE 189 Query: 189 GTIFEAIRSRTV 200 T+ A R Sbjct: 190 ITLGRAFSGRQS 201 >gi|159035924|ref|YP_001535177.1| recombination protein RecR [Salinispora arenicola CNS-205] gi|157914759|gb|ABV96186.1| recombination protein RecR [Salinispora arenicola CNS-205] Length = 197 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 115/196 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R H++ + LA+ + + V C+ C Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFHVLSADPADVNRLADVLRKVKELVRFCTSCY 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +R V+ VVE+ D+ A+ER+ YHVLGG+++PL+ +GP++ Sbjct: 61 NVAESEQCRICRDPRRTDEVLCVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGVGPDN 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ +RELI A EG+ TA Y+ +K + + ++RLA G+P+G +L+ Sbjct: 121 LRVRELLTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGIAVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGRRS 196 >gi|317131172|ref|YP_004090486.1| recombination protein RecR [Ethanoligenens harbinense YUAN-3] gi|315469151|gb|ADU25755.1| recombination protein RecR [Ethanoligenens harbinense YUAN-3] Length = 199 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + LI+ R+PG G ++A+R ++ + A+A+ + ++ C + Sbjct: 1 MAYYAAPLSRLIEQFERLPGIGRKTAQRLAFFVLDGTNEQAKAFAQAILDAKGQMHTCKV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC + RD + I VVED D+ A ER++ N LYHVL G +SP+D IGP Sbjct: 61 CQNLTDGEICTICGNPARDHTTICVVEDPRDVVAFERTRDYNGLYHVLHGVISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I+ L+ R ++E+I A + +EG+ TA YI ++ + VK+TR+AYGIP+G E Sbjct: 121 EQLHIKELLARA-ADGVQEIILATNPDVEGEATALYISRLIRPLGVKVTRIAYGIPVGGE 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ A+ R+ L Sbjct: 180 LEYADEITLSRALEGRSEL 198 >gi|37523068|ref|NP_926445.1| recombination protein [Gloeobacter violaceus PCC 7421] gi|73621488|sp|Q7NFM5|RECR_GLOVI RecName: Full=Recombination protein recR gi|35214071|dbj|BAC91440.1| recombination protein [Gloeobacter violaceus PCC 7421] Length = 197 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG GP++A+R HL+++ + LA+A+ ++ +CS C Sbjct: 1 MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC R I VV + DL A+ER++ YHVLGG ++P++ IGPE Sbjct: 61 NLSAEDPCDICRQPGRQGETICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ ++E+I AI+ + EG+ T Y+ +K + ++TR+A+G+P+G +L+ Sbjct: 121 LRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVKVLGPRVTRIAFGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R + Sbjct: 181 YADEMTLARALEGRREI 197 >gi|293567581|ref|ZP_06678925.1| recombination protein RecR [Enterococcus faecium E1071] gi|291589682|gb|EFF21486.1| recombination protein RecR [Enterococcus faecium E1071] Length = 198 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 125/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + K++++ A+++ ++ + CSICGN Sbjct: 3 YPEPIAKLIDSYMKLPGIGQKTATRLAFYTIDMKDEVVNEFAKSLLSVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC + RD SVI+VVE+ D+ A+E+ + + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICRNLSRDRSVILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL++R+ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NISSLLQRLHDADVKEVIIATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLLKAVEGRREL 198 >gi|291303586|ref|YP_003514864.1| recombination protein RecR [Stackebrandtia nassauensis DSM 44728] gi|290572806|gb|ADD45771.1| recombination protein RecR [Stackebrandtia nassauensis DSM 44728] Length = 199 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 117/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +L+ L R+PG GP+SA+R H++ + + LAEA+ + +V C ICG Sbjct: 1 MYEGALGDLVDELGRLPGIGPKSAQRIAFHILGTDKADVDRLAEALRVVKERVRFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV T + C IC D +R +I VVE+ D+ A+ER+ YHVLGG+++PLD +GPED Sbjct: 61 NVATEEKCRICRDARRTDEMICVVEEPKDVIAIERTGEFRGRYHVLGGAINPLDGVGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R++ +EL+ A EG+ TA Y+ + + + ++RLA G+P+G +L+ Sbjct: 121 LRIRELMTRLQAGVTKELVIATDPNTEGEATATYLALMITPMGLTVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRRT 196 >gi|270307945|ref|YP_003330003.1| recombination protein [Dehalococcoides sp. VS] gi|270153837|gb|ACZ61675.1| recombination protein [Dehalococcoides sp. VS] Length = 204 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 115/191 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI L ++PG GP+SA+R +L++ E+ + L++ + +I N++ C IC NV Sbjct: 12 AVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEEQVLALSDTIRSIKNQISQCRICFNVAD 71 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 ++ C IC + +R+ + I VVE D+ ALE YHVL G++SP + I ++I I Sbjct: 72 SELCPICQNTKRETNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNIRIS 131 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R++ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y DD Sbjct: 132 ELMSRLDNGQVDEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEYADD 191 Query: 189 GTIFEAIRSRT 199 T+ A+ R Sbjct: 192 VTLSRAMEGRQ 202 >gi|86738985|ref|YP_479385.1| recombination protein RecR [Frankia sp. CcI3] gi|123751565|sp|Q2JGD6|RECR_FRASC RecName: Full=Recombination protein recR gi|86565847|gb|ABD09656.1| DNA replication and repair protein RecR [Frankia sp. CcI3] Length = 199 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 116/195 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + LA A+ + KV C C Sbjct: 1 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLAADPVDVRRLATALTEVKEKVQFCRSCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +RD S I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D Sbjct: 61 NVAQSELCRICSDPRRDPSSICVVEEPKDVVAIERTREFRGRYHVLGGAINPIGGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A EG+ TA Y+ ++ + +K+TRLA G+PMG +L+ Sbjct: 121 LHIRELVARLADGTVTELILATDPNTEGEVTASYLARQIAPMGLKVTRLASGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 + D+ T+ A R Sbjct: 181 WADEVTLGRAFEGRR 195 >gi|238018441|ref|ZP_04598867.1| hypothetical protein VEIDISOL_00268 [Veillonella dispar ATCC 17748] gi|282849746|ref|ZP_06259130.1| recombination protein RecR [Veillonella parvula ATCC 17745] gi|294792634|ref|ZP_06757781.1| recombination protein RecR [Veillonella sp. 6_1_27] gi|237864912|gb|EEP66202.1| hypothetical protein VEIDISOL_00268 [Veillonella dispar ATCC 17748] gi|282580683|gb|EFB86082.1| recombination protein RecR [Veillonella parvula ATCC 17745] gi|294456533|gb|EFG24896.1| recombination protein RecR [Veillonella sp. 6_1_27] Length = 198 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 115/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+ Sbjct: 4 ALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSA 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++ Sbjct: 64 QDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+ Sbjct: 124 ELIARLRDGVVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 LTLGGAVVNRQEM 196 >gi|88856403|ref|ZP_01131061.1| recombination protein RecR [marine actinobacterium PHSC20C1] gi|88814270|gb|EAR24134.1| recombination protein RecR [marine actinobacterium PHSC20C1] Length = 199 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 123/196 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L R+PG GP+SA+R H+++ + + LAE + +I +KV C+ICG Sbjct: 1 MYDGIVQELIDELGRLPGIGPKSAQRIAFHILQTESFDVRRLAELLNDIRDKVHFCAICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C+IC D +R + I VVE+ D+ A+ER++ + LYHVLGG++SP+D IGP+ Sbjct: 61 NVTEHETCSICRDPRRSPASICVVEEAKDVVAIERTREFSGLYHVLGGAISPIDGIGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + E+I A +EG+ TA Y+ L +++I+RLA G+P+G +L+ Sbjct: 121 LRIKQLLGRLADGVVTEVIIATDPNLEGEATATYLTRLLVQPNLRISRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ A R Sbjct: 181 YADEVTLGRAFEGRRT 196 >gi|258593671|emb|CBE70012.1| Recombination protein recR [NC10 bacterium 'Dutch sediment'] Length = 199 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 129/200 (64%), Gaps = 2/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + LI L R+PG GP++A+R T HL+K + LA+A+ + +++ C Sbjct: 1 MSR--YAPTLVRLIGELVRLPGIGPKTAQRLTFHLLKAGREEAIALAQAIIELKDRIRSC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C N+ + C IC+D RD SV+ VVE+ DLWA+E++ YHVLGGSLSPL+ Sbjct: 59 AVCYNISEGEQCPICVDPTRDGSVLCVVEEANDLWAIEKTATFKGRYHVLGGSLSPLEGR 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + ++L++R+E +++E+I A + +EG+ TA Y+ LK + V++TR+A G+PMG Sbjct: 119 GPDQLTAKALLQRLEGGEVKEVILATNPNVEGEATAMYLSRLLKPLAVRVTRIARGLPMG 178 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S+L+Y D+ T+ +++ R Sbjct: 179 SDLEYADEVTLSKSLEGRRE 198 >gi|237736576|ref|ZP_04567057.1| recombination protein recR [Fusobacterium mortiferum ATCC 9817] gi|229420438|gb|EEO35485.1| recombination protein recR [Fusobacterium mortiferum ATCC 9817] Length = 197 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 115/196 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H+++ +E+ + EA+ + C CG Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSAARLAFHVLEMREEQVESFIEALREAKEVIKRCPKCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C IC ++ RD+ I VVED D+ + E+ +YH+LGG ++PL+ I P+ Sbjct: 61 DFCENDLCDICSNELRDSHTICVVEDSRDVISFEKMGKYKGMYHILGGKIAPLNGITPDK 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ER+ V ++ E+I A++ +EG+TTA Y+ LK +K+T++A GIPMG ++ Sbjct: 121 LNIKSLLERVTVDEVEEVILALNPDLEGETTALYLTKLLKPFGIKVTKIASGIPMGGNIE 180 Query: 185 YLDDGTIFEAIRSRTV 200 + D TI A+ R Sbjct: 181 FADSATISRALEGRQE 196 >gi|303228676|ref|ZP_07315501.1| recombination protein RecR [Veillonella atypica ACS-134-V-Col7a] gi|302516656|gb|EFL58573.1| recombination protein RecR [Veillonella atypica ACS-134-V-Col7a] Length = 198 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 114/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L++ L R+PG G +SARR HLV+ ++ + L + CSIC N+ Sbjct: 4 ALERLVEQLRRLPGIGSKSARRLAYHLVEMPQEEVDRLVNTIVEAKGATRHCSICFNLSA 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSPL+ IG EDI ++ Sbjct: 64 QDPCEFCSNHNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPLEGIGAEDIRVK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+ Sbjct: 124 ELIARLRDGVVQEVILATDPDVEGEATALYLARLLAPTGIKVTRIARGVPVGGDIEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 LTLGGAVVNRQEM 196 >gi|317472131|ref|ZP_07931463.1| recombination protein RecR [Anaerostipes sp. 3_2_56FAA] gi|316900535|gb|EFV22517.1| recombination protein RecR [Anaerostipes sp. 3_2_56FAA] Length = 198 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L ++PG GP+SA R H++ + L+E++ + V C Sbjct: 1 MDYYSSQITKLIEELGKLPGIGPKSAGRLAFHIINMPLDQVKHLSESILDAKENVHYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC +RD S I+VVE DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CCTLTDQDICPICSSSKRDHSTIMVVESTRDLMAYEKTGKYEGIYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R+ + ELI A ++++EG+TTA YI +K +K++++A G+P+G + Sbjct: 121 SDIRLKELMARL-QGDVNELIIATNSSLEGETTAMYISKLVKPTGIKVSKIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTEL 198 >gi|269798690|ref|YP_003312590.1| recombination protein RecR [Veillonella parvula DSM 2008] gi|269095319|gb|ACZ25310.1| recombination protein RecR [Veillonella parvula DSM 2008] Length = 198 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 115/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+ Sbjct: 4 ALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSA 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++ Sbjct: 64 QDPCEFCSNPNRDHTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+ Sbjct: 124 ELIARLRDGVVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 LTLGGAVVNRQEM 196 >gi|168333589|ref|ZP_02691854.1| recombination protein RecR [Epulopiscium sp. 'N.t. morphotype B'] Length = 200 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + LI L+++PG G +SA R +++ + + LA+A+ + C Sbjct: 1 MNNYYGSKMLS-LIGELSKLPGIGTKSASRLAFYIISMPKDKVDQLAKAIVEAKENIRYC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C V C IC D +R+ ++I+VVED D+ A E++ +YH+L G++SPL + Sbjct: 60 EKCCTVTDDVLCPICKDDRREKNLIMVVEDSRDMAAYEKTGEYRGVYHILNGAISPLMGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI ++ L+ RI+ +KI E+I A + IEG+ TA YI K + VK TR+A+G+P+G Sbjct: 120 GPNDIKVKELLSRIKNEKIDEIILATNPNIEGEATAMYISKLTKPLGVKTTRIAHGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y+D+ T+ A++ R + Sbjct: 180 GDLEYVDEVTLSRALQGRMEI 200 >gi|330470587|ref|YP_004408330.1| recombination protein RecR [Verrucosispora maris AB-18-032] gi|328813558|gb|AEB47730.1| recombination protein RecR [Verrucosispora maris AB-18-032] Length = 197 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 115/195 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI L R+PG GP+SA+R +++ + LA A+ + V C+ C Sbjct: 1 MYEGAIQDLIDELGRLPGVGPKSAQRIAFYVLSADPADVNRLAGALRKVKELVRFCTNCY 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV +D C IC D +R VI VVE+ D+ A+ER+ YHVLGG+++PL+ IGP++ Sbjct: 61 NVAESDQCRICRDPRRSDEVICVVEEPKDVVAIERTGEFRGRYHVLGGAINPLEGIGPDN 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ +RELI A EG+ TA Y+ +K + + +TRLA G+P+G +L+ Sbjct: 121 LRIRELMTRLGGGAVRELILATDPNTEGEATATYLALMVKPMGISVTRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ A R Sbjct: 181 YADEITLGRAFEGRR 195 >gi|325856054|ref|ZP_08171943.1| recombination protein RecR [Prevotella denticola CRIS 18C-A] gi|325483726|gb|EGC86690.1| recombination protein RecR [Prevotella denticola CRIS 18C-A] Length = 202 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 133/199 (66%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + +E ++ +++PG G ++A R LHL+++ + AEA+ + + V C Sbjct: 1 MQQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQPADEVDGFAEAIVRVKHDVKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ +D C+IC D +RDAS++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +G Sbjct: 61 VCHNISDSDVCSICSDPRRDASLVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I SL++R++ ++E+I A+++T+EG TT Y+ KLKG +VK++ +A GI +G Sbjct: 121 PHDLEIDSLVKRVDEGGVKEVILALASTMEGDTTNFYLSRKLKGKNVKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSILNRTP 199 >gi|94969000|ref|YP_591048.1| recombination protein RecR [Candidatus Koribacter versatilis Ellin345] gi|166221918|sp|Q1IQ76|RECR_ACIBL RecName: Full=Recombination protein recR gi|94551050|gb|ABF40974.1| DNA replication and repair protein RecR [Candidatus Koribacter versatilis Ellin345] Length = 199 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + + LI L ++PG G +SA+R H+++ LA+A+ ++ K+ LC Sbjct: 1 MSK--FAEPMARLIDELKKLPGVGNKSAQRLAFHILRSSNDDAELLADAVRDVKAKLRLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SIC N+ DPC C + R+ VI VVE+ ++ A+E+++ N +YHVL G+LSPL + Sbjct: 59 SICNNITDVDPCTYCANPTRNQQVICVVEEPTNISAVEKTRHFNGVYHVLHGALSPLHGV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I +LI+R+E K E+I A + T+EG+ TA Y+ LK V++TR+A G+P+G Sbjct: 119 GPEHLRISNLIKRVEGGKAEEVILATNPTVEGEATATYLSKILKAEGVRVTRIATGVPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S+++Y D+ T+ +A+ R L Sbjct: 179 SDIEYADEVTMQKAMEGRREL 199 >gi|258513458|ref|YP_003189680.1| recombination protein RecR [Desulfotomaculum acetoxidans DSM 771] gi|257777163|gb|ACV61057.1| recombination protein RecR [Desulfotomaculum acetoxidans DSM 771] Length = 199 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 123/192 (64%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 + LI + +PG GP++A+R +L+ E++ LAEA+ + + CS+C N+ Sbjct: 8 VSRLINEFSLLPGVGPKTAQRIAFYLLNAPEEVAHRLAEAVREARDNIKYCSVCSNLTDV 67 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 DPC IC D +R ++I +V++ D+ A+E+S+ LYHVL G++SP+D IGPE++ I+ Sbjct: 68 DPCLICSDNKRSKNIICIVQEPRDVIAMEKSRGFKGLYHVLHGAISPMDGIGPENLRIKE 127 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ +K+ ELI A + +EG TA Y+ +K + +K+TR+A+G+P+G+ L+Y D Sbjct: 128 LLSRLHKEKVGELILATNPNVEGDATAFYLARLIKPLGIKVTRIAHGLPVGACLEYADGV 187 Query: 190 TIFEAIRSRTVL 201 T+ +A+ R + Sbjct: 188 TLTKALEGRQEI 199 >gi|27383225|ref|NP_774754.1| recombination protein RecR [Bradyrhizobium japonicum USDA 110] gi|73621472|sp|Q89BN4|RECR_BRAJA RecName: Full=Recombination protein recR gi|27356399|dbj|BAC53379.1| recombination protein [Bradyrhizobium japonicum USDA 110] Length = 200 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 108/198 (54%), Positives = 150/198 (75%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + G EIE L+++LAR+PG GPRSARRA LHL+KK+E L+ PL+ A+ +KV +C Sbjct: 1 MGAVAGPEIERLVQLLARLPGLGPRSARRAALHLIKKREALMMPLSSALQVALDKVQVCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CGN+DT +PC +C D +RD ++I+VV DVADLWALER+ A YHVLG +LSPLD +G Sbjct: 61 TCGNIDTQNPCTVCTDPKRDPAIIVVVADVADLWALERANATQGRYHVLGATLSPLDGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+D+ I +L+ R ++ E+I A++AT++GQTTAHYI D L+ +VK+TRLA+G+P+G Sbjct: 121 PQDLTIDALVARAHAAEVHEVILALNATVDGQTTAHYITDLLQDANVKVTRLAHGVPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ A+R RT Sbjct: 181 ELDYLDEGTLSAAMRQRT 198 >gi|3925822|dbj|BAA34648.1| RecR protein [Deinococcus radiodurans] Length = 220 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 2/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + Sbjct: 63 ITDAEKCDVCADPSRDQRTICVVEEHGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y Sbjct: 123 HIKPLLPRV--GQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEY 180 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 181 TDEVTLGRALTGRQT 195 >gi|313894384|ref|ZP_07827949.1| recombination protein RecR [Veillonella sp. oral taxon 158 str. F0412] gi|313441208|gb|EFR59635.1| recombination protein RecR [Veillonella sp. oral taxon 158 str. F0412] Length = 198 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 115/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+ Sbjct: 4 ALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSA 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++ Sbjct: 64 QDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+ Sbjct: 124 ELIARLRDGIVQEVILATDPDVEGEATALYLARLLSPSGIKVTRIARGVPVGGDIEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 LTLGGAVVNRQEM 196 >gi|197124083|ref|YP_002136034.1| recombination protein RecR [Anaeromyxobacter sp. K] gi|196173932|gb|ACG74905.1| recombination protein RecR [Anaeromyxobacter sp. K] Length = 198 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 83/193 (43%), Positives = 119/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I L+K LAR+PG G ++A+R H++K G LA A+A + V LCS C + Sbjct: 6 PIARLVKELARLPGIGEKTAQRLAFHILKAGPGYAGDLAAAIAGVVRDVRLCSTCQTLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPCAIC D +RDA + VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+ Sbjct: 66 QDPCAICRDPERDARTLCVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D Sbjct: 126 ELLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQ 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R L Sbjct: 186 VTLARALAGRREL 198 >gi|192359825|ref|YP_001982900.1| recombination protein RecR [Cellvibrio japonicus Ueda107] gi|190685990|gb|ACE83668.1| recombination protein RecR [Cellvibrio japonicus Ueda107] Length = 197 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ L+ L +PG GP+SA+R LHL+++ LA ++ V C C Sbjct: 1 MFSPLIDELMSSLRCLPGVGPKSAQRMALHLLERDRVGAERLARSLHKAIEGVGRCRRCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC +++RD ++ VVE AD+ A+E++ Y VL G LSP+D +GPED Sbjct: 61 TLTEQELCGICRNERRDPGLLCVVETPADVLAIEQAGTYQGKYFVLLGHLSPIDGVGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L++ ++ + + E+I A + T+EG+ TA YI ++ K ++V ++R+A+G+P+G EL+ Sbjct: 121 IGIDQLLQLLQQEPVTEVILATNPTVEGEATAFYISERAKNLNVTVSRIAHGVPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 ++D GT+ A SR L Sbjct: 181 FIDGGTLAHAFSSRRSL 197 >gi|73748422|ref|YP_307661.1| recombination protein RecR [Dehalococcoides sp. CBDB1] gi|147669202|ref|YP_001214020.1| DNA replication and repair protein RecR [Dehalococcoides sp. BAV1] gi|289432469|ref|YP_003462342.1| recombination protein RecR [Dehalococcoides sp. GT] gi|123619528|sp|Q3ZWX3|RECR_DEHSC RecName: Full=Recombination protein recR gi|189029359|sp|A5FRM7|RECR_DEHSB RecName: Full=Recombination protein recR gi|73660138|emb|CAI82745.1| recombination protein RecR [Dehalococcoides sp. CBDB1] gi|146270150|gb|ABQ17142.1| DNA replication and repair protein RecR [Dehalococcoides sp. BAV1] gi|288946189|gb|ADC73886.1| recombination protein RecR [Dehalococcoides sp. GT] Length = 204 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 114/190 (60%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 + LI L ++PG GP+SA+R +L++ E + L++ + NI N++ C IC NV + Sbjct: 13 VNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEDQVISLSDTIRNIKNQISQCRICCNVADS 72 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC + +R+ + I VVE D+ ALE YHVL G++SP + I ++I I Sbjct: 73 ELCPICQNTKRETNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNIRINE 132 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R++ ++ E+I A + T EG+ TA Y+ + + +K+TRLA G+P G+EL+Y DD Sbjct: 133 LMVRLDNGQVEEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEYADDV 192 Query: 190 TIFEAIRSRT 199 T+ A+ R Sbjct: 193 TLSRAMEGRQ 202 >gi|194477243|ref|YP_002049422.1| RecR protein [Paulinella chromatophora] gi|171192250|gb|ACB43212.1| RecR protein [Paulinella chromatophora] Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI R+PG GPR+A+R LHL+++ E+ + L +A+ Y++V C C + Sbjct: 9 FTRPLARLIDQFERLPGIGPRTAQRLALHLLRQPEEQIRSLIDALQAAYSQVGQCQCCFH 68 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC + R ++ +V D DL ALER++ YHVLGG +SP+D IGPE + Sbjct: 69 LSADVLCEICSNNDRHNGLLCIVADSRDLLALERTREYKGSYHVLGGLISPMDGIGPELL 128 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 IQSLI+RI+ + E I A++ TIEG TT+ Y+ LK +++R+AYG+P+GSEL+Y Sbjct: 129 QIQSLIDRIKKDNVTETILALTPTIEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEY 187 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A+ R + Sbjct: 188 TDEVTLTRALEGRRKI 203 >gi|315121977|ref|YP_004062466.1| recombination protein RecR [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495379|gb|ADR51978.1| recombination protein RecR [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 201 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 174/201 (86%), Positives = 192/201 (95%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+KKITG EIENLIK+LARIPGFGPRSARRATLHLVKKKEQLLGPLA+ MA+IY KVCLC Sbjct: 1 MKKKITGIEIENLIKMLARIPGFGPRSARRATLHLVKKKEQLLGPLADTMADIYKKVCLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGN+DT DPC ICID+QRD+SVI+V+EDVADLWALER+ AVNALYHVLGG+LSPLD I Sbjct: 61 SICGNIDTIDPCIICIDEQRDSSVIVVIEDVADLWALERAGAVNALYHVLGGTLSPLDSI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDIGIQSLIERI+VKKIRELI AISATIEGQTTAHYIMDKLK +++KITRLAYGIP+G Sbjct: 121 GPEDIGIQSLIERIKVKKIRELILAISATIEGQTTAHYIMDKLKNMNIKITRLAYGIPIG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SELDYLD+GT+FEAIRSRTVL Sbjct: 181 SELDYLDEGTLFEAIRSRTVL 201 >gi|288802015|ref|ZP_06407456.1| recombination protein RecR [Prevotella melaninogenica D18] gi|288335450|gb|EFC73884.1| recombination protein RecR [Prevotella melaninogenica D18] Length = 202 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 132/199 (66%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + +E ++ +++PG G ++A R LHL+++ + + A+A+ + + V C Sbjct: 1 MQQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQSTEDVDSFADAVIRVKHDVKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ + C+IC D +RDASV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IG Sbjct: 61 VCHNISDNEVCSICSDPRRDASVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I+SL+ER+E ++E+I A+++T+EG TT YI KLK VK++ +A GI +G Sbjct: 121 PHDLEIESLVERVEEGTVKEVILALASTMEGDTTNFYISRKLKDTGVKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSILNRTP 199 >gi|324993373|gb|EGC25293.1| recombination protein R [Streptococcus sanguinis SK405] gi|325690164|gb|EGD32168.1| recombination protein R [Streptococcus sanguinis SK115] gi|325697103|gb|EGD38990.1| recombination protein R [Streptococcus sanguinis SK160] gi|327473368|gb|EGF18788.1| recombination protein R [Streptococcus sanguinis SK408] gi|327489501|gb|EGF21294.1| recombination protein R [Streptococcus sanguinis SK1058] Length = 198 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGVKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|256826614|ref|YP_003150573.1| DNA replication and repair protein RecR [Cryptobacterium curtum DSM 15641] gi|256582757|gb|ACU93891.1| DNA replication and repair protein RecR [Cryptobacterium curtum DSM 15641] Length = 198 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ L+ AR+PG GP+SA+R ++ L+ A+ + + V CS C Sbjct: 2 YSAPSIQTLLDEFARLPGIGPKSAQRMVYWILNSDRASAERLSRAIMEVKDTVHFCSRCF 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D C IC +RD +I VV + D+ +ER+ A +YHVLGG+LSPL+ IGP+ Sbjct: 62 NYAEGDLCEICASPKRDQGIICVVSEPRDIPPIERTAAFMGVYHVLGGALSPLEGIGPDQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ ++ E+I A + +EG+TTA Y+ ++ +++K+TRLA G+P+G +L+ Sbjct: 122 LHINELMRRLSDPQVTEVILATNPNVEGETTASYLARLIRPLNIKVTRLASGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 + D+ T+ AI SR V+ Sbjct: 182 FADEVTLSRAIESRRVI 198 >gi|159900439|ref|YP_001546686.1| recombination protein RecR [Herpetosiphon aurantiacus ATCC 23779] gi|229890153|sp|A9AUX0|RECR_HERA2 RecName: Full=Recombination protein recR gi|159893478|gb|ABX06558.1| recombination protein RecR [Herpetosiphon aurantiacus ATCC 23779] Length = 204 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 IT + + LI R+PG GP+SA R +L++ K + LA A+ + + C+ C Sbjct: 8 ITPEPVAKLIDEFNRLPGIGPKSASRLVFYLLRAKREQSERLANAIMAMKDSTIFCNRCF 67 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC + R+ + VVE+ D+ ALER+ LYHVL G++SP++ I PED Sbjct: 68 NITVEDPCTICTNANRNERQVCVVEEPLDVVALERTGEFKGLYHVLHGAISPVEGINPED 127 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ V+ I E+I + + +EG TA Y+ ++ + +++TRLA G+PMGS+L+ Sbjct: 128 LRIRELLARLRVEPIEEVILSTNPNLEGDATAAYLAREIIPLGIRVTRLARGLPMGSDLE 187 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A++ R + Sbjct: 188 YADEVTLGRALQGRREM 204 >gi|220924616|ref|YP_002499918.1| recombination protein RecR [Methylobacterium nodulans ORS 2060] gi|254790776|sp|B8IFQ5|RECR_METNO RecName: Full=Recombination protein recR gi|219949223|gb|ACL59615.1| recombination protein RecR [Methylobacterium nodulans ORS 2060] Length = 201 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 118/199 (59%), Positives = 153/199 (76%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++LAR+PG GPRSARRA L L+KK+E LL PLAEAM ++ +C Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKREALLAPLAEAMRVACERIVVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNVDT+DPC IC D RD S+++VVEDV+DLWALERS AV A YHVLGG LS LD I Sbjct: 61 HECGNVDTSDPCTICRDHSRDPSILVVVEDVSDLWALERSGAVTARYHVLGGVLSALDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE++ + L+ER V ++RE+I A++AT++GQTTAHYI + L + VK+T+LA+G+P+G Sbjct: 121 RPENLNLSRLVERASVPEMREVILALNATVDGQTTAHYITELLAHLPVKVTKLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIR RT Sbjct: 181 GELDYLDEGTLSAAIRQRT 199 >gi|310819968|ref|YP_003952326.1| Recombination protein [Stigmatella aurantiaca DW4/3-1] gi|309393040|gb|ADO70499.1| Recombination protein [Stigmatella aurantiaca DW4/3-1] Length = 197 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 +T + L+ LA++PG G ++A+R H+++ + L++A+ + KV LC+ C Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRAPSEYAVDLSQAIREVKEKVHLCTRCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ T+ C C D +RD V+ VVE ADL ALER++ YHVL G LSPL+ IGP+ Sbjct: 61 SLTDTELCGFCRDSRRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGIGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ER+ K+ E+I A + +EG+ T+ Y+M LK + ++++R+A G+PMG +L+ Sbjct: 121 LRIRELLERLADSKVEEIILATNPDVEGEATSLYLMRLLKPLGLRVSRIAQGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+ +A+ +R L Sbjct: 181 YADQATLAKALSARREL 197 >gi|331003028|ref|ZP_08326540.1| recombination protein recR [Lachnospiraceae oral taxon 107 str. F0167] gi|330413072|gb|EGG92447.1| recombination protein recR [Lachnospiraceae oral taxon 107 str. F0167] Length = 198 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ L+++PG G +SA+R H++ + + L++A+ + V C Sbjct: 1 MDYYSSHISKLIEELSKLPGVGAKSAQRLAFHIIGMSSEQVDSLSKAIKDAKGNVNYCRE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC ++RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CFTLTDGEVCPICASEKRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ LI+R+ + E+I A ++T+EG+TTA YI +K ++++R+A G+P+G + Sbjct: 121 ADIKLKELIKRL-ESDVNEVIIATNSTLEGETTAMYIAKLIKPTGIEVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R +L Sbjct: 180 LEYIDEVTLLRALEGRRLL 198 >gi|217966693|ref|YP_002352199.1| recombination protein RecR [Dictyoglomus turgidum DSM 6724] gi|217335792|gb|ACK41585.1| recombination protein RecR [Dictyoglomus turgidum DSM 6724] Length = 200 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 83/198 (41%), Positives = 127/198 (64%), Gaps = 1/198 (0%) Query: 5 ITGKEI-ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 + K I E LI L ++PG GP+ A+R +L+K+ ++ + LA + + ++ CSIC Sbjct: 1 MAEKSIFEKLIDELTKLPGIGPKLAQRIAFYLLKQPQESVEVLANTILKVKKEIKYCSIC 60 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 N+ DPC IC + +RD S+I VV + DLWA+E++ + +YHVLGG +SPLD + PE Sbjct: 61 FNLTEKDPCEICTNPERDKSIICVVAEPKDLWAIEKTSKFHGVYHVLGGLISPLDGVFPE 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 D+ I+ L+ER++ I+E+I A +T EG+ TA YI L VK+TRLA+G+P G+EL Sbjct: 121 DLRIKELMERVKKGNIKEVILATDSTPEGEATAMYIARLLMEYPVKVTRLAHGLPAGTEL 180 Query: 184 DYLDDGTIFEAIRSRTVL 201 D+ D+ T+ A+ R L Sbjct: 181 DFADEMTLIHALEGRKEL 198 >gi|49259537|pdb|1VDD|A Chain A, Crystal Structure Of Recombinational Repair Protein Recr gi|49259538|pdb|1VDD|B Chain B, Crystal Structure Of Recombinational Repair Protein Recr gi|49259539|pdb|1VDD|C Chain C, Crystal Structure Of Recombinational Repair Protein Recr gi|49259540|pdb|1VDD|D Chain D, Crystal Structure Of Recombinational Repair Protein Recr Length = 228 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 2/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + Sbjct: 63 ITDAEKCDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y Sbjct: 123 HIKPLLPRV--GQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEY 180 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 181 TDEVTLGRALTGRQT 195 >gi|15805234|ref|NP_293922.1| recombination protein RecR [Deinococcus radiodurans R1] gi|7388065|sp|Q9ZNA2|RECR_DEIRA RecName: Full=Recombination protein recR gi|151568115|pdb|2V1C|A Chain A, Crystal Structure And Mutational Study Of Recor Provide Insight Into Its Role In Dna Repair gi|151568116|pdb|2V1C|B Chain B, Crystal Structure And Mutational Study Of Recor Provide Insight Into Its Role In Dna Repair gi|6457868|gb|AAF09785.1|AE001882_3 recR protein [Deinococcus radiodurans R1] Length = 220 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 2/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + Sbjct: 63 ITDAEKCDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y Sbjct: 123 HIKPLLPRV--GQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEY 180 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 181 TDEVTLGRALTGRQT 195 >gi|28572867|ref|NP_789647.1| recombination protein RecR [Tropheryma whipplei TW08/27] gi|73621528|sp|Q83N83|RECR_TROW8 RecName: Full=Recombination protein recR gi|28411000|emb|CAD67385.1| recombination protein RecR [Tropheryma whipplei TW08/27] Length = 198 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +++LI+ L ++PG GP+SA+R +++ + L+E + ++ +V C +CG Sbjct: 1 MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D C IC D +RD VI VVE+ D+ A+E+++ + LYHVLGG++SP+D +GP+D Sbjct: 61 NFSEEDECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ I E++ A +EG+ TA YI + + +++++LA G+P+GS+L+ Sbjct: 121 LNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R + Sbjct: 181 YADEITLGRALEGRQYI 197 >gi|257057602|ref|YP_003135434.1| recombination protein RecR [Saccharomonospora viridis DSM 43017] gi|256587474|gb|ACU98607.1| DNA replication and repair protein RecR [Saccharomonospora viridis DSM 43017] Length = 198 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 1/198 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ L L E + + V C +CG Sbjct: 1 MYEGVVQDLIDELGRLPGIGPKSAQRIAFHLLASDPADLARLQEVLGKVREGVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD SVI VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSERERCRICSDPRRDTSVICVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183 + I+ L+ RI ++ E+I A EG+ TA Y++ LK + +TRLA G+PMG +L Sbjct: 121 LRIKELLSRIGADEVSEVIIATDPNTEGEATATYLVRMLKDFPGLTVTRLASGLPMGGDL 180 Query: 184 DYLDDGTIFEAIRSRTVL 201 ++ D+ T+ A+ R L Sbjct: 181 EFADELTLGRALSGRRAL 198 >gi|332362738|gb|EGJ40534.1| recombination protein R [Streptococcus sanguinis SK49] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSQDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|303231327|ref|ZP_07318062.1| recombination protein RecR [Veillonella atypica ACS-049-V-Sch6] gi|302514007|gb|EFL56014.1| recombination protein RecR [Veillonella atypica ACS-049-V-Sch6] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 114/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L++ L R+PG G +SARR HLV+ ++ + L + CSIC N+ Sbjct: 4 ALERLVEQLRRLPGIGSKSARRLAYHLVEMPQEEVDRLVNTVVEAKGATRHCSICFNLSA 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSPL+ IG EDI ++ Sbjct: 64 QDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPLEGIGAEDIRVK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ ++E+I A +EG+ TA Y+ L +K+TR+A G+P+G +++Y D+ Sbjct: 124 ELIARLRDGVVQEVILATDPDVEGEATALYLARLLAPTGIKVTRIARGVPVGGDIEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 LTLGGAVVNRQEM 196 >gi|325694086|gb|EGD36004.1| recombination protein R [Streptococcus sanguinis SK150] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|229544853|ref|ZP_04433578.1| recombination protein RecR [Enterococcus faecalis TX1322] gi|256854060|ref|ZP_05559425.1| recombination protein recR [Enterococcus faecalis T8] gi|229310021|gb|EEN76008.1| recombination protein RecR [Enterococcus faecalis TX1322] gi|256711003|gb|EEU26046.1| recombination protein recR [Enterococcus faecalis T8] gi|315030415|gb|EFT42347.1| recombination protein RecR [Enterococcus faecalis TX4000] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPED+ Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDV 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEITLLKAVEGRREI 198 >gi|149375205|ref|ZP_01892977.1| recombination protein RecR [Marinobacter algicola DG893] gi|149360569|gb|EDM49021.1| recombination protein RecR [Marinobacter algicola DG893] Length = 200 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 116/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ L++ L +PG G ++A+R HL+++ L++A+ V C C N Sbjct: 3 FSPLVDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGSRLSDALDRAMTGVRRCESCQN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 T C IC + +R + VVE +DL A+E++ Y VL G LSP+D +GPE+I Sbjct: 63 FADTPTCNICENPERRTGTLCVVESPSDLLAIEQAGDYRGSYFVLMGHLSPIDGVGPEEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI+ L++RI + + ELI A + T+EG+ TAHYI D+L G D+ ITRLA+GIP+G EL Y Sbjct: 123 GIERLLKRIHGEGVTELILATNPTVEGEATAHYIADRLDGRDILITRLAHGIPVGGELGY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A R R L Sbjct: 183 VDGFTLTHAFRGRKPL 198 >gi|302347114|ref|YP_003815412.1| recombination protein RecR [Prevotella melaninogenica ATCC 25845] gi|302151179|gb|ADK97440.1| recombination protein RecR [Prevotella melaninogenica ATCC 25845] Length = 202 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 132/199 (66%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + +E ++ +++PG G ++A R LHL+++ + + A+A+ + + V C Sbjct: 1 MQQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQSTEDVDSFADAVIRVKHDVKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ + C+IC D +RDASV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IG Sbjct: 61 VCHNISDNEVCSICSDPRRDASVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I+SL+ER+E ++E+I A+++T+EG TT YI KLK VK++ +A GI +G Sbjct: 121 PHDLEIESLVERVEEGTVKEIILALASTMEGDTTNFYISRKLKDTGVKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSILNRTP 199 >gi|83859369|ref|ZP_00952890.1| recombination protein RecR [Oceanicaulis alexandrii HTCC2633] gi|83852816|gb|EAP90669.1| recombination protein RecR [Oceanicaulis alexandrii HTCC2633] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 111/195 (56%), Positives = 147/195 (75%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI++L+++PG GPRSARRA+L L++K++QL+ PLAEAMA+ +K+ C+ CGN Sbjct: 3 AGPEIERLIQLLSKLPGLGPRSARRASLSLLQKRDQLMKPLAEAMADAADKISACAECGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +D TDPC++C D +RD SVI VVE V DLWALER+ A YHVLGG LS LD +GPED+ Sbjct: 63 LDVTDPCSVCRDHRRDDSVICVVETVGDLWALERAGAFKGRYHVLGGVLSALDGVGPEDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + LIER + ++E+I A++AT++GQTTAH++ DKL V IT LA G+P+G ELDY Sbjct: 123 NVAKLIERANREDVKEVILALNATVDGQTTAHFLADKLAEASVDITSLARGVPVGGELDY 182 Query: 186 LDDGTIFEAIRSRTV 200 LDDGT+ A RSR Sbjct: 183 LDDGTLTAAFRSRRP 197 >gi|226355493|ref|YP_002785233.1| recombination protein RecR [Deinococcus deserti VCD115] gi|259563690|sp|C1D0V5|RECR_DEIDV RecName: Full=Recombination protein recR gi|226317483|gb|ACO45479.1| putative recombination protein RecR [Deinococcus deserti VCD115] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 2/194 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + C +C N Sbjct: 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLAGALLAAKRDLHTCPVCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD ++I VVE+ D+ A+ERS LYHVL G LSP++ +GPE + Sbjct: 63 ITDAERCDVCSDPSRDQNLICVVEEPGDVIAIERSGEYRGLYHVLHGVLSPMNGVGPEKL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ ++ +E+I A T+EG TA Y+ L+ + ++R+AYG+P+G L+Y Sbjct: 123 HIKPLLPRV--QEGQEIILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGALEY 180 Query: 186 LDDGTIFEAIRSRT 199 D+ T+ A+ R Sbjct: 181 ADEVTLGRALTGRQ 194 >gi|126667420|ref|ZP_01738392.1| recombination protein RecR [Marinobacter sp. ELB17] gi|126628176|gb|EAZ98801.1| recombination protein RecR [Marinobacter sp. ELB17] Length = 200 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 117/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ L++ L +PG G ++A+R HL+++ L +A+ + V C C Sbjct: 2 VFSPLVDELVESLRVLPGVGQKTAQRMAFHLLERARSGGSRLGDALGRAMDGVRRCDRCQ 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N TD C IC + +R+ V+ VVE +DL A+E++ A Y VL G LSP+D IGPE Sbjct: 62 NFADTDVCGICENPERNTGVLCVVESPSDLLAIEQAGDYRAGYFVLMGHLSPIDGIGPEQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L+ R+ + + ELI A + T+EG+ TAHYI D+L +V ITRLA+GIP+G EL Sbjct: 122 IGIDRLVHRVRDEGVTELILATNPTVEGEATAHYIADRLADNNVLITRLAHGIPVGGELG 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A R R L Sbjct: 182 YVDGFTLTHAFRGRKPL 198 >gi|148239861|ref|YP_001225248.1| recombination protein RecR [Synechococcus sp. WH 7803] gi|172047796|sp|A5GLY6|RECR_SYNPW RecName: Full=Recombination protein recR gi|147848400|emb|CAK23951.1| Recombination protein RecR [Synechococcus sp. WH 7803] Length = 199 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 1/194 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI R+PG GPR+A+R LHL+++ E+ + A+A+ +V C C + Sbjct: 4 FTRPLARLIDQFERLPGIGPRTAQRLALHLLRQPEEQIRSFADALLAARTEVGHCQTCHH 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC + +R I VV D DL ALER++ + YHVLGG +SP+D IGP+ + Sbjct: 64 LSAEPTCEICRNPERANGQICVVADSRDLLALERTREFSGHYHVLGGLISPMDGIGPDLL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL++R+ E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y Sbjct: 124 QISSLVKRVAANNTEEVILALTPSVEGDTTSLYVARLLKPF-TRVSRIAYGLPVGSELEY 182 Query: 186 LDDGTIFEAIRSRT 199 DD T+ A+ R Sbjct: 183 ADDVTLSRALEGRR 196 >gi|319938751|ref|ZP_08013115.1| recombination protein recR [Streptococcus anginosus 1_2_62CV] gi|319811801|gb|EFW08067.1| recombination protein recR [Streptococcus anginosus 1_2_62CV] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ +PCAIC D+ RD S I+VVED D+ A+E + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDDNPCAICTDETRDQSTILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|322412134|gb|EFY03042.1| recombination protein RecR [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDGKVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|313885438|ref|ZP_07819188.1| recombination protein RecR [Eremococcus coleocola ACS-139-V-Col8] gi|312619168|gb|EFR30607.1| recombination protein RecR [Eremococcus coleocola ACS-139-V-Col8] Length = 198 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 121/196 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R +++ E+ + A+ + N+ ++ CS+CGN Sbjct: 3 YPAPIAKLINSFTKLPGIGSKTAARLAFYVLDMPERDVLEFAQNLINVKRELTYCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D R I+VVED D+ ++ER + N LYHVL G LSP++ GP+D+ Sbjct: 63 ITDSDPCPICQDPGRSHKEILVVEDARDVMSMERMQEYNGLYHVLHGVLSPMEGTGPDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+E I E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIASLIKRLEDPTIEEVIIATNATAEGEATAMYLARLIKPAGIKVTRLAHGLAVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T++ AI R L Sbjct: 183 ADEMTLYRAIEGRREL 198 >gi|323352704|ref|ZP_08087674.1| recombination protein R [Streptococcus sanguinis VMC66] gi|322121740|gb|EFX93486.1| recombination protein R [Streptococcus sanguinis VMC66] Length = 198 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I NLI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIANLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|312866082|ref|ZP_07726303.1| recombination protein RecR [Streptococcus downei F0415] gi|311098486|gb|EFQ56709.1| recombination protein RecR [Streptococcus downei F0415] Length = 198 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D+ RD S ++VVE+ D+ A+E+ + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICRDKTRDQSTLLVVEESKDVTAMEKIQDYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ +I E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLINRLMDSQINEVIVATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|125717544|ref|YP_001034677.1| recombination protein RecR [Streptococcus sanguinis SK36] gi|166223508|sp|A3CLS2|RECR_STRSV RecName: Full=Recombination protein recR gi|125497461|gb|ABN44127.1| Recombinational DNA repair protein (RecF pathway), putative [Streptococcus sanguinis SK36] gi|324990633|gb|EGC22569.1| recombination protein R [Streptococcus sanguinis SK353] gi|325688254|gb|EGD30273.1| recombination protein R [Streptococcus sanguinis SK72] gi|327458731|gb|EGF05079.1| recombination protein R [Streptococcus sanguinis SK1057] gi|327461648|gb|EGF07979.1| recombination protein R [Streptococcus sanguinis SK1] gi|328945545|gb|EGG39696.1| recombination protein R [Streptococcus sanguinis SK1087] gi|332363452|gb|EGJ41235.1| recombination protein R [Streptococcus sanguinis SK355] gi|332366051|gb|EGJ43807.1| recombination protein R [Streptococcus sanguinis SK1059] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|225571142|ref|ZP_03780140.1| hypothetical protein CLOHYLEM_07230 [Clostridium hylemonae DSM 15053] gi|225159973|gb|EEG72592.1| hypothetical protein CLOHYLEM_07230 [Clostridium hylemonae DSM 15053] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+ +PG G +SA R HL+ + + LA+ M V CS Sbjct: 1 MDYYSNQISKLIEELSCLPGIGTKSASRLAFHLIHMPVEEVKRLADTMVEARENVRYCSE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC ++ RD I+VVE DL A E++ +YHVL G++SP+ IGP Sbjct: 61 CYTLTDQELCPICRNEARDHKTIMVVETTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ED+ ++ L+ER+ K + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 EDVKLKELMERL-RKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT + Sbjct: 180 LEYIDEVTLLRALEGRTEI 198 >gi|312116064|ref|YP_004013660.1| recombination protein RecR [Rhodomicrobium vannielii ATCC 17100] gi|311221193|gb|ADP72561.1| recombination protein RecR [Rhodomicrobium vannielii ATCC 17100] Length = 204 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 115/200 (57%), Positives = 151/200 (75%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 QKK +G EIE LI +LA++PG GPRSARRA LHL+KK+EQLL PLA A+ +K+ +C Sbjct: 5 QKKSSGAEIEELIALLAKLPGLGPRSARRAALHLIKKREQLLLPLARALGVAADKIAICK 64 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CGN+DT PCAIC D RDAS I VVE+V DLWALER+ V + YHVLGG+LSPLD G Sbjct: 65 ECGNIDTQQPCAICADASRDASTICVVEEVGDLWALERAAIVRSRYHVLGGTLSPLDGRG 124 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+D+ + L+ER + E+I A++AT+EGQ+TAHYI +L+G+ +K+TRLA G+P+G Sbjct: 125 PDDLFLVKLMERARQPGVNEIILALNATVEGQSTAHYIAAELEGLPLKVTRLARGVPIGG 184 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ AI+ R + Sbjct: 185 ELDYLDEGTLAAAIKLRQPI 204 >gi|220918862|ref|YP_002494166.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-1] gi|219956716|gb|ACL67100.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-1] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 82/193 (42%), Positives = 118/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I L+K LAR+PG G ++A+R H++K G LA A+A + V LCS C + Sbjct: 6 PIARLVKELARLPGIGEKTAQRLAFHILKAGAGYAGDLAAAIAGVVRDVRLCSTCQTLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPCAIC D +RD + VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+ Sbjct: 66 QDPCAICRDPERDPRTLCVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D Sbjct: 126 ELLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQ 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R L Sbjct: 186 VTLARALAGRREL 198 >gi|294012440|ref|YP_003545900.1| recombination protein RecR [Sphingobium japonicum UT26S] gi|292675770|dbj|BAI97288.1| recombination protein RecR [Sphingobium japonicum UT26S] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 103/197 (52%), Positives = 146/197 (74%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EIE L + L+R+PG GPRSARRA LHL+KK+E L PL A+ + ++ CS+CG Sbjct: 1 MASPEIEELTQALSRLPGLGPRSARRAVLHLLKKRESALEPLLRALDAVNERLVTCSLCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT DPC IC D +RDA + VVEDVADLWAL++S+ +HVLGG LS L+ + PED Sbjct: 61 NVDTVDPCGICADPRRDARALCVVEDVADLWALDKSRLFPGRFHVLGGRLSALEGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ V++T+LA+G+P+G ELD Sbjct: 121 LSIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPVRLTQLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLD+GT+ +A+R+R L Sbjct: 181 YLDEGTLAQALRARRPL 197 >gi|284989078|ref|YP_003407632.1| recombination protein RecR [Geodermatophilus obscurus DSM 43160] gi|284062323|gb|ADB73261.1| recombination protein RecR [Geodermatophilus obscurus DSM 43160] Length = 199 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 117/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + +G L A+ + +V CS C Sbjct: 1 MYEGAVQDLIDELGRLPGVGPKSAQRIAFHLLAAESADVGRLVAALQRVQAEVRFCSTCY 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +R VI VVE+ D+ A+ER++ YHVLGG++SP++ +GP+D Sbjct: 61 NVAEGEQCRICRDPRRADDVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ + ELI A +EG+ TA Y+ + + + ++RLA G+P+G +L+ Sbjct: 121 LRVKELMTRLMSGAVTELIIATDPNLEGEATAAYLARLVGPLGLAVSRLASGLPVGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R + Sbjct: 181 YADEVTLGRAFEGRRRI 197 >gi|324995314|gb|EGC27226.1| recombination protein R [Streptococcus sanguinis SK678] gi|327468993|gb|EGF14465.1| recombination protein R [Streptococcus sanguinis SK330] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S +++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTLLIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|261867515|ref|YP_003255437.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans D11S-1] gi|293391392|ref|ZP_06635726.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans D7S-1] gi|261412847|gb|ACX82218.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans D11S-1] gi|290951926|gb|EFE02045.1| recombination protein RecR [Aggregatibacter actinomycetemcomitans D7S-1] Length = 200 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENLI+ L +PG GP+SA+R HL+++ LA+ + +K+ C C Sbjct: 3 TSPLLENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDVCNICSNPRRQNSGLLCVVETPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + E+I A + T+EG TA+YI + +VK++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLQTESFNEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 MVDGTTLTHSFLGRREI 199 >gi|328956230|ref|YP_004373563.1| DNA replication and repair protein RecR [Coriobacterium glomerans PW2] gi|328456554|gb|AEB07748.1| DNA replication and repair protein RecR [Coriobacterium glomerans PW2] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 121/194 (62%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ L+ L R+PG GP+SA+R HL++ + LA A+ + +V C+ C N Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYHLLEADPEQARRLAAAIIQVKTEVHFCARCFNYA 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 T C+IC D RD + I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + + Sbjct: 65 TEQECSICSDTSRDRTRICVVSEPRDVSAIERTGSYRGLYHVLGGVISPMDKIGPEQLHV 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R+ + I ELI A + IEG+TTA Y+ +K + V ++RLA G+P+G +L+Y D Sbjct: 125 RELLARLGAEDIEELIIATNPNIEGETTASYLARAIKPLGVCVSRLASGLPVGGDLEYAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+ AI +R L Sbjct: 185 ELTLGRAIEARRSL 198 >gi|311694774|gb|ADP97647.1| recombination protein RecR [marine bacterium HP15] Length = 200 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 118/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ L++ L +PG G ++A+R HL+++ L+EA++ + V C C N Sbjct: 3 FSPLVDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGTRLSEALSQAMSGVRRCESCQN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 T+ C IC + QR + VVE +DL A+E++ Y VL G LSP+D +GPE+I Sbjct: 63 FADTEICGICENPQRRTGTLCVVESPSDLLAIEQAGDYRGGYFVLMGHLSPIDGVGPEEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI+ L++RI + + ELI A + T+EG+ TAHYI D+L G + ITRLA+GIP+G EL Y Sbjct: 123 GIERLLKRIRDEGVTELILATNPTVEGEATAHYIADRLDGQGILITRLAHGIPVGGELGY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A R R L Sbjct: 183 VDGFTLTHAFRGRKPL 198 >gi|297624594|ref|YP_003706028.1| recombination protein RecR [Truepera radiovictrix DSM 17093] gi|297165774|gb|ADI15485.1| recombination protein RecR [Truepera radiovictrix DSM 17093] Length = 196 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L R+PG GP+SA+R +L + E+ + LAEA+ N + C C N Sbjct: 3 YPPALTQLIRELGRLPGIGPKSAQRLAFYLFNQPEEDVKSLAEALLNAKGNLRQCERCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C++C D R+ +I VVE ADL A+ERS + LYHVL G+LSP++ +GP+ + Sbjct: 63 ITDQEVCSVCRDPGREQGLICVVEAPADLLAIERSGEYSGLYHVLHGALSPMNGVGPDQL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 IQ L+ R+ +RE+I A + T+EG+ TA Y+ L + V +R+AYG+P+G +L+Y Sbjct: 123 TIQPLLARL--GGVREVILATATTVEGEATAMYLARLLGELKVPTSRIAYGLPVGGDLEY 180 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI +R L Sbjct: 181 ADEVTLGRAISNRRPL 196 >gi|111220097|ref|YP_710891.1| recombination protein RecR [Frankia alni ACN14a] gi|122954652|sp|Q0RT19|RECR_FRAAA RecName: Full=Recombination protein recR gi|111147629|emb|CAJ59284.1| recombination and repair protein [Frankia alni ACN14a] Length = 199 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 118/195 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + LA A+ + +KV C C Sbjct: 1 MYEGIVQDLIDELGRLPGIGPKSAQRIAFHLLAADPVDVRRLATALTEVKDKVRFCRSCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D Sbjct: 61 NVAQSELCRICADPRRDQALICVVEEPKDVVAIERTREFRGRYHVLGGAINPIGGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + ELI A EG+ TA Y+ ++ + +++TRLA G+PMG +L+ Sbjct: 121 LHIRELVARLADGTVTELILATDPNTEGEVTASYLARQIGPMGLRVTRLASGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 + D+ T+ A R Sbjct: 181 WADEVTLGRAFEGRR 195 >gi|229816111|ref|ZP_04446429.1| hypothetical protein COLINT_03164 [Collinsella intestinalis DSM 13280] gi|229808311|gb|EEP44095.1| hypothetical protein COLINT_03164 [Collinsella intestinalis DSM 13280] Length = 198 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 123/194 (63%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ L+ L R+PG GP+SA+R HL++ + LA+A+ + ++V CS C N Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYHLLEADAEEARRLADAILMVKSEVHFCSRCFNYA 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 T D CAIC D RD I VV + D+ A+ER+ + LYHVLGG +SP+D+IGPE + + Sbjct: 65 TGDECAICEDSSRDRGRICVVGEPRDVSAIERTGSYRGLYHVLGGVISPMDKIGPEQLHV 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R+ + I E+I A + IEG+TTA Y+ +K + + +TRLA G+P+G +L+Y D Sbjct: 125 RELLARLGTEDIEEVIIATNPNIEGETTASYLARTIKPLGITVTRLASGLPVGGDLEYAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+ AI +R L Sbjct: 185 ELTLGRAIEARRAL 198 >gi|315223280|ref|ZP_07865141.1| recombination protein RecR [Streptococcus anginosus F0211] gi|315187712|gb|EFU21466.1| recombination protein RecR [Streptococcus anginosus F0211] Length = 198 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D+ RD S I+VVED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCAICTDETRDQSTILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|325833721|ref|ZP_08166136.1| recombination protein RecR [Eggerthella sp. HGA1] gi|325485261|gb|EGC87731.1| recombination protein RecR [Eggerthella sp. HGA1] Length = 198 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I+ L+ L R+PG GP+SA+R ++ + L++A+A + V CS C Sbjct: 2 YAAPSIQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSDAIAEVKETVRFCSRCF 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP++ Sbjct: 62 NYAEDDLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L+ Sbjct: 122 LRIAQLMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 + D+ T+ AI +R L Sbjct: 182 FADEVTLGRAIEARRPL 198 >gi|262283027|ref|ZP_06060794.1| recombination protein recR [Streptococcus sp. 2_1_36FAA] gi|262261279|gb|EEY79978.1| recombination protein recR [Streptococcus sp. 2_1_36FAA] Length = 198 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D+ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDEDPCAICRDESRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|257790373|ref|YP_003180979.1| recombination protein RecR [Eggerthella lenta DSM 2243] gi|257474270|gb|ACV54590.1| recombination protein RecR [Eggerthella lenta DSM 2243] Length = 198 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I+ L+ L R+PG GP+SA+R ++ + L+EA+A + V CS C Sbjct: 2 YAAPSIQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSEAIAEVKETVRFCSRCF 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP++ Sbjct: 62 NYAEDDLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L+ Sbjct: 122 LRIAQLMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 + D+ T+ AI +R L Sbjct: 182 FADEVTLGRAIEARRPL 198 >gi|227519452|ref|ZP_03949501.1| recombination protein RecR [Enterococcus faecalis TX0104] gi|229549119|ref|ZP_04437844.1| recombination protein RecR [Enterococcus faecalis ATCC 29200] gi|255971838|ref|ZP_05422424.1| recombination protein RecR [Enterococcus faecalis T1] gi|255974834|ref|ZP_05425420.1| recombination protein RecR [Enterococcus faecalis T2] gi|256616734|ref|ZP_05473580.1| recombination protein RecR [Enterococcus faecalis ATCC 4200] gi|256763387|ref|ZP_05503967.1| recombination protein RecR [Enterococcus faecalis T3] gi|256957991|ref|ZP_05562162.1| recombination protein RecR [Enterococcus faecalis DS5] gi|256960989|ref|ZP_05565160.1| recombination protein RecR [Enterococcus faecalis Merz96] gi|256963868|ref|ZP_05568039.1| recombination protein RecR [Enterococcus faecalis HIP11704] gi|257079928|ref|ZP_05574289.1| recombination protein RecR [Enterococcus faecalis JH1] gi|257081674|ref|ZP_05576035.1| recombination protein RecR [Enterococcus faecalis E1Sol] gi|257084271|ref|ZP_05578632.1| recombination protein RecR [Enterococcus faecalis Fly1] gi|257087730|ref|ZP_05582091.1| recombination protein RecR [Enterococcus faecalis D6] gi|257091002|ref|ZP_05585363.1| recombination protein recR [Enterococcus faecalis CH188] gi|257416933|ref|ZP_05593927.1| recombination protein RecR [Enterococcus faecalis AR01/DG] gi|257420152|ref|ZP_05597146.1| recombination protein recR [Enterococcus faecalis T11] gi|257421625|ref|ZP_05598615.1| recombination protein recR [Enterococcus faecalis X98] gi|293384624|ref|ZP_06630489.1| recombination protein RecR [Enterococcus faecalis R712] gi|293386763|ref|ZP_06631334.1| recombination protein RecR [Enterococcus faecalis S613] gi|294779712|ref|ZP_06745100.1| recombination protein RecR [Enterococcus faecalis PC1.1] gi|300860165|ref|ZP_07106252.1| recombination protein RecR [Enterococcus faecalis TUSoD Ef11] gi|307269206|ref|ZP_07550560.1| recombination protein RecR [Enterococcus faecalis TX4248] gi|307271816|ref|ZP_07553087.1| recombination protein RecR [Enterococcus faecalis TX0855] gi|307277001|ref|ZP_07558111.1| recombination protein RecR [Enterococcus faecalis TX2134] gi|307278694|ref|ZP_07559762.1| recombination protein RecR [Enterococcus faecalis TX0860] gi|307288617|ref|ZP_07568598.1| recombination protein RecR [Enterococcus faecalis TX0109] gi|307290231|ref|ZP_07570147.1| recombination protein RecR [Enterococcus faecalis TX0411] gi|312900124|ref|ZP_07759440.1| recombination protein RecR [Enterococcus faecalis TX0470] gi|312906448|ref|ZP_07765456.1| recombination protein RecR [Enterococcus faecalis DAPTO 512] gi|312951939|ref|ZP_07770827.1| recombination protein RecR [Enterococcus faecalis TX0102] gi|312979394|ref|ZP_07791082.1| recombination protein RecR [Enterococcus faecalis DAPTO 516] gi|227073064|gb|EEI11027.1| recombination protein RecR [Enterococcus faecalis TX0104] gi|229305744|gb|EEN71740.1| recombination protein RecR [Enterococcus faecalis ATCC 29200] gi|255962856|gb|EET95332.1| recombination protein RecR [Enterococcus faecalis T1] gi|255967706|gb|EET98328.1| recombination protein RecR [Enterococcus faecalis T2] gi|256596261|gb|EEU15437.1| recombination protein RecR [Enterococcus faecalis ATCC 4200] gi|256684638|gb|EEU24333.1| recombination protein RecR [Enterococcus faecalis T3] gi|256948487|gb|EEU65119.1| recombination protein RecR [Enterococcus faecalis DS5] gi|256951485|gb|EEU68117.1| recombination protein RecR [Enterococcus faecalis Merz96] gi|256954364|gb|EEU70996.1| recombination protein RecR [Enterococcus faecalis HIP11704] gi|256987958|gb|EEU75260.1| recombination protein RecR [Enterococcus faecalis JH1] gi|256989704|gb|EEU77006.1| recombination protein RecR [Enterococcus faecalis E1Sol] gi|256992301|gb|EEU79603.1| recombination protein RecR [Enterococcus faecalis Fly1] gi|256995760|gb|EEU83062.1| recombination protein RecR [Enterococcus faecalis D6] gi|256999814|gb|EEU86334.1| recombination protein recR [Enterococcus faecalis CH188] gi|257158761|gb|EEU88721.1| recombination protein RecR [Enterococcus faecalis ARO1/DG] gi|257161980|gb|EEU91940.1| recombination protein recR [Enterococcus faecalis T11] gi|257163449|gb|EEU93409.1| recombination protein recR [Enterococcus faecalis X98] gi|291078082|gb|EFE15446.1| recombination protein RecR [Enterococcus faecalis R712] gi|291083766|gb|EFE20729.1| recombination protein RecR [Enterococcus faecalis S613] gi|294453203|gb|EFG21617.1| recombination protein RecR [Enterococcus faecalis PC1.1] gi|295113699|emb|CBL32336.1| DNA replication and repair protein RecR [Enterococcus sp. 7L76] gi|300849204|gb|EFK76954.1| recombination protein RecR [Enterococcus faecalis TUSoD Ef11] gi|306498652|gb|EFM68153.1| recombination protein RecR [Enterococcus faecalis TX0411] gi|306500371|gb|EFM69707.1| recombination protein RecR [Enterococcus faecalis TX0109] gi|306504634|gb|EFM73836.1| recombination protein RecR [Enterococcus faecalis TX0860] gi|306506424|gb|EFM75584.1| recombination protein RecR [Enterococcus faecalis TX2134] gi|306511694|gb|EFM80693.1| recombination protein RecR [Enterococcus faecalis TX0855] gi|306514425|gb|EFM82986.1| recombination protein RecR [Enterococcus faecalis TX4248] gi|310627602|gb|EFQ10885.1| recombination protein RecR [Enterococcus faecalis DAPTO 512] gi|310630128|gb|EFQ13411.1| recombination protein RecR [Enterococcus faecalis TX0102] gi|311287765|gb|EFQ66321.1| recombination protein RecR [Enterococcus faecalis DAPTO 516] gi|311292759|gb|EFQ71315.1| recombination protein RecR [Enterococcus faecalis TX0470] gi|315025469|gb|EFT37401.1| recombination protein RecR [Enterococcus faecalis TX2137] gi|315035136|gb|EFT47068.1| recombination protein RecR [Enterococcus faecalis TX0027] gi|315143842|gb|EFT87858.1| recombination protein RecR [Enterococcus faecalis TX2141] gi|315148726|gb|EFT92742.1| recombination protein RecR [Enterococcus faecalis TX4244] gi|315151799|gb|EFT95815.1| recombination protein RecR [Enterococcus faecalis TX0012] gi|315154272|gb|EFT98288.1| recombination protein RecR [Enterococcus faecalis TX0031] gi|315155625|gb|EFT99641.1| recombination protein RecR [Enterococcus faecalis TX0043] gi|315159636|gb|EFU03653.1| recombination protein RecR [Enterococcus faecalis TX0312] gi|315162071|gb|EFU06088.1| recombination protein RecR [Enterococcus faecalis TX0645] gi|315165332|gb|EFU09349.1| recombination protein RecR [Enterococcus faecalis TX1302] gi|315168746|gb|EFU12763.1| recombination protein RecR [Enterococcus faecalis TX1341] gi|315170438|gb|EFU14455.1| recombination protein RecR [Enterococcus faecalis TX1342] gi|315173505|gb|EFU17522.1| recombination protein RecR [Enterococcus faecalis TX1346] gi|315579602|gb|EFU91793.1| recombination protein RecR [Enterococcus faecalis TX0630] gi|323481687|gb|ADX81126.1| recombination protein RecR [Enterococcus faecalis 62] gi|327535979|gb|AEA94813.1| recombination protein R [Enterococcus faecalis OG1RF] Length = 198 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEITLLKAVEGRREI 198 >gi|325269487|ref|ZP_08136103.1| recombination protein R [Prevotella multiformis DSM 16608] gi|324988106|gb|EGC20073.1| recombination protein R [Prevotella multiformis DSM 16608] Length = 202 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 136/199 (68%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + +E ++ + +PG G ++A R LHL+++ + + A+A++++ + V C Sbjct: 1 MQQYPSQLLERAVEAFSCLPGVGRKTALRLVLHLLRQSDDEVDGFADAISHVKHDVKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ +D C+IC D +RDAS++ VVE+V D+ A+E ++ + LYHVLGG +SPLD IG Sbjct: 61 VCHNISDSDLCSICADPRRDASLVCVVENVQDVMAIENTQQFHGLYHVLGGVISPLDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I+SL++R+E +RE+I A+S+T+EG TT YI KLKG DVK++ +A GI +G Sbjct: 121 PHDLEIESLVKRVEKGGVREIILALSSTMEGDTTNFYISRKLKGKDVKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSILNRTP 199 >gi|315032615|gb|EFT44547.1| recombination protein RecR [Enterococcus faecalis TX0017] Length = 198 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGAGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEITLLKAVEGRREI 198 >gi|251782870|ref|YP_002997173.1| recombination protein RecR [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391500|dbj|BAH81959.1| recombination protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 198 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG Sbjct: 2 FYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDGKVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|294673627|ref|YP_003574243.1| recombination protein RecR [Prevotella ruminicola 23] gi|294474191|gb|ADE83580.1| recombination protein RecR [Prevotella ruminicola 23] Length = 205 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 125/198 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 Q++ + +E ++ +++PG G ++A R L ++++ + + A+ + V C Sbjct: 3 QQQYPSQLLEKAVQEFSKLPGIGRKTALRLVLWMLRQDDSDVTQFTAAVNELKCGVKYCK 62 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ TD C IC DQ+RD + + VVE++ D+ A+E ++ N LYHVLGG +SP+D +G Sbjct: 63 VCHNISDTDICPICADQRRDQTTVCVVENIQDVMAIENTQQFNGLYHVLGGVISPMDGMG 122 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P DI I SLI+R+ ++E+I A+S T+EG TT YI KL +K++ +A GI +G+ Sbjct: 123 PADIEIDSLIQRVGEGTVQEVILALSPTMEGDTTNFYIYRKLAPTGIKVSVIARGIAVGN 182 Query: 182 ELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 183 ELEYADEVTLGRSITNRT 200 >gi|297572177|ref|YP_003697951.1| recombination protein RecR [Arcanobacterium haemolyticum DSM 20595] gi|296932524|gb|ADH93332.1| recombination protein RecR [Arcanobacterium haemolyticum DSM 20595] Length = 208 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 119/193 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +++LI L R+PG GP+SA+R HL++ + + L EA+ + KV C++CGN+ Sbjct: 8 AVQSLIDELGRLPGVGPKSAQRIAFHLLEADDDEVNHLVEALQAVKAKVQFCTVCGNIAE 67 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC D +R S I VVE+ D+ A+ERS+ YHVLGG++ P+ +GP+++ I+ Sbjct: 68 GDLCRICADLRRVESTICVVEEAKDIVAIERSREYRGKYHVLGGAIDPIGGVGPDNLRIR 127 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R++ + E+I A+ +EG+ TA Y+ L + V ++RLA G+P+G +L+Y D+ Sbjct: 128 ELYARLQDGTVEEVILAMDPNVEGEATATYLAINLAHMGVVVSRLASGLPVGGDLEYADE 187 Query: 189 GTIFEAIRSRTVL 201 TI A+ R + Sbjct: 188 VTISRALEGRQRI 200 >gi|86160053|ref|YP_466838.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-C] gi|123496736|sp|Q2IFP4|RECR_ANADE RecName: Full=Recombination protein recR gi|85776564|gb|ABC83401.1| recombination protein RecR [Anaeromyxobacter dehalogenans 2CP-C] Length = 198 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 83/193 (43%), Positives = 120/193 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I L+K LA++PG G ++A+R H++K G LA A+A + V LCS C + Sbjct: 6 PIARLVKELAKLPGIGEKTAQRLAFHILKAGAGYAGDLAAAIAGVVRDVRLCSTCQTLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPCAIC D +RDA +I VVE V DL A+ER+ YHVL G+LSPLD +GP D+ I+ Sbjct: 66 QDPCAICRDPERDARMICVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGVGPSDLKIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+E + E++ A + +EG+ TA Y+ LK + +K+TR+A G+PMG +L+Y D Sbjct: 126 ELLVRLEREPADEIVVATNPDVEGEATALYLTKLLKPMGLKVTRIAQGVPMGGDLEYADQ 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R L Sbjct: 186 VTLARALAGRREL 198 >gi|298492185|ref|YP_003722362.1| recombination protein RecR ['Nostoc azollae' 0708] gi|298234103|gb|ADI65239.1| recombination protein RecR ['Nostoc azollae' 0708] Length = 189 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 77/188 (40%), Positives = 123/188 (65%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ L R+PG GP+SA+R LH++K+ E + LA+A+ + +V LC +C ++ + C Sbjct: 2 IEQLQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIDAKKQVGLCQVCYHLSSEPVCD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC + RD + I VV D D+ ALE+++ YHVLGG +SP+D IGPE + Q+L+ R Sbjct: 62 ICRNPNRDNTTICVVADSRDVIALEKTREYKGKYHVLGGVISPMDGIGPEQLTAQALVRR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + ++ +E+I AIS ++EG+TT YI + LK K+TR+A+G+P+G +L+Y D+ T+ Sbjct: 122 VSQQQPQEVIMAISPSVEGETTTLYIGELLKPF-TKVTRIAFGLPVGGDLEYADEVTLVR 180 Query: 194 AIRSRTVL 201 A+ R L Sbjct: 181 ALEGRREL 188 >gi|78213164|ref|YP_381943.1| DNA replication and repair protein RecR [Synechococcus sp. CC9605] gi|78197623|gb|ABB35388.1| recombination protein RecR [Synechococcus sp. CC9605] Length = 219 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C + Sbjct: 25 FTKPLARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFH 84 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC + +R VI VV D DL ALER++ + YHVLGG +SP+D IGPE + Sbjct: 85 LSADPECEICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELL 144 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y Sbjct: 145 RVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFC-SVSRIAYGLPMGSELEY 203 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 204 ADEVTLSRALEGRRP 218 >gi|299144508|ref|ZP_07037587.1| recombination protein RecR [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517596|gb|EFI41336.1| recombination protein RecR [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 199 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 123/201 (61%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + K IENLI L ++PG G ++A+R H++ + + L++A+ + V C Sbjct: 1 MKNR--AKPIENLINQLNKLPGVGNKTAQRLAYHIIDMDFEKVKALSDAITSAKENVKQC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SIC N DPC IC D RD SVI VVE D+ A+ER+ + +YHVL G++SP I Sbjct: 59 SICANFTDIDPCKICNDTNRDESVICVVEYPKDVEAMERATCYHGMYHVLHGTISPNKGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ I+ L++R+E I E+I A + T EG TTA YI L + +K TR+AYGIP+G Sbjct: 119 GPNNLKIRELLKRLENNNIEEIIIATNPTAEGDTTALYISKLLSPLGIKTTRIAYGIPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ TI A+ +R + Sbjct: 179 GDLEYYDELTISTALENRREI 199 >gi|294794413|ref|ZP_06759549.1| recombination protein RecR [Veillonella sp. 3_1_44] gi|294454743|gb|EFG23116.1| recombination protein RecR [Veillonella sp. 3_1_44] Length = 198 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 115/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L++ L R+PG G +SARR HLV+ ++ + L E + CSIC N+ Sbjct: 4 ALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFNLSA 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC C + RD + I+VVE D+ A+ERS LYHVL G+LSP++ IG +DI ++ Sbjct: 64 QDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDIRVK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ ++E+I A IEG+ TA Y+ L +K+TR+A G+P+G +++Y D+ Sbjct: 124 ELIARLRDGVVQEVILATDPDIEGEATALYLARLLTPSGIKVTRIARGVPVGGDIEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 LTLGGAVVNRQEM 196 >gi|94500849|ref|ZP_01307375.1| recombination protein RecR [Oceanobacter sp. RED65] gi|94426968|gb|EAT11950.1| recombination protein RecR [Oceanobacter sp. RED65] Length = 199 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M I L++ L +PG GP+SA+R LHL++K + L ++ ++V C Sbjct: 1 MAS--LSPLINELVEALTILPGVGPKSAQRLALHLLEKDQSGAHRLVGMLSKALDEVGHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ + C IC D +R + VVE A++ A+E++ Y VL G LSP+D I Sbjct: 59 KKCRNLTEKEYCPICDDAKRTDEQLCVVETPAEVLAIEQTG-FKGRYFVLFGRLSPIDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE +G+ L +++ ++E+I A + T+EGQ T+ YI L+G +V ITR+A+G+P+G Sbjct: 118 GPEKLGLDQLKQQVVENGVKEVILATNPTVEGQATSQYIQQMLQGSNVLITRIAHGVPLG 177 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y+D GT+ A+ R Sbjct: 178 GELEYVDGGTLAHALAGRK 196 >gi|56551708|ref|YP_162547.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ZM4] gi|241762297|ref|ZP_04760378.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752715|ref|YP_003225608.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|73621533|sp|Q5NPC4|RECR_ZYMMO RecName: Full=Recombination protein recR gi|56543282|gb|AAV89436.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ZM4] gi|241373200|gb|EER62830.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552078|gb|ACV75024.1| recombination protein RecR [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 198 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 104/196 (53%), Positives = 149/196 (76%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ IENLIK LA +PG GPRSARRA L+L+KK+E L LA+A+ + + +C CG Sbjct: 1 MSASPIENLIKSLAVMPGLGPRSARRAALYLIKKRETALYNLAQALDEVQQSLVICPECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+D+ +PC+IC D +RD +++ VVE+VADLWAL+RS+ +HVLGG LS LD I PED Sbjct: 61 NIDSCNPCSICSDPKRDDALLCVVEEVADLWALDRSRLFAGRFHVLGGRLSALDGITPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L++R++ KI+E++ A++AT+EGQTTAHYI D L+ V+IT+LA+G+P+G ELD Sbjct: 121 LSIDALVKRVQSGKIKEVVLAMNATLEGQTTAHYITDCLEKYPVRITQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLDDGT+ +A+R+R Sbjct: 181 YLDDGTLAQALRARRP 196 >gi|116622273|ref|YP_824429.1| recombination protein RecR [Candidatus Solibacter usitatus Ellin6076] gi|122254206|sp|Q022F6|RECR_SOLUE RecName: Full=Recombination protein recR gi|116225435|gb|ABJ84144.1| recombination protein RecR [Candidatus Solibacter usitatus Ellin6076] Length = 199 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 122/194 (62%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + + LI R+PG G +SA+R H+++ K + L++A+ ++ +K+ LC++C N+ Sbjct: 6 EPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAVCNNIA 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C C D RD SV+ VVE+ ++ +E ++ YHVL G+LSPL +GP+ + I Sbjct: 66 DGEICQYCSDSNRDPSVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGPDMLKI 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ERI ++RE+I A + +EG+ TA Y+ LK + VK+TR+ GIP+GS+L++ D Sbjct: 126 KGLVERIGQGEVREVIVATNPNVEGEATAVYLARLLKPLGVKVTRIGMGIPVGSDLEFAD 185 Query: 188 DGTIFEAIRSRTVL 201 + TI +A+ R + Sbjct: 186 EVTISKAMEGRREM 199 >gi|327313231|ref|YP_004328668.1| recombination protein RecR [Prevotella denticola F0289] gi|326944473|gb|AEA20358.1| recombination protein RecR [Prevotella denticola F0289] Length = 202 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 133/199 (66%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + +E ++ +++PG G ++A R LHL+++ + AEA+ + + V C Sbjct: 1 MQQYPSQLLERAVEAFSQLPGVGRKTALRLVLHLLRQPADEVDGFAEAVVRVKHDVKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ +D C+IC D +RDAS++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +G Sbjct: 61 VCHNISDSDVCSICSDPRRDASLVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I SL++R++ ++E+I A+++T+EG TT Y+ KLKG +VK++ +A GI +G Sbjct: 121 PHDLEIDSLVKRVDEGGVKEVILALASTMEGDTTNFYLSRKLKGKNVKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSILNRTP 199 >gi|294678280|ref|YP_003578895.1| recombination protein RecR [Rhodobacter capsulatus SB 1003] gi|294477100|gb|ADE86488.1| recombination protein RecR [Rhodobacter capsulatus SB 1003] Length = 199 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 2/199 (1%) Query: 5 ITGK--EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++G EIE LI +AR+PG GPRSARRA LHL++K+E + PLA A++ + C I Sbjct: 1 MSGPRDEIEALIAQMARLPGLGPRSARRAVLHLLRKREGQMAPLAAALSRVAETARDCPI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ C IC R I VVEDVADLWALER A YHVLGG+LS LD IGP Sbjct: 61 CGNIAMGASCEICDSPARAIGEICVVEDVADLWALERGGAFKGRYHVLGGTLSALDAIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E++ I LI RI + + E+I A++AT+EGQTTAHYI + L+G V++T LA G+P+G E Sbjct: 121 EELRIPQLIARIRAEAVTEVILALNATVEGQTTAHYIAEALEGTGVRVTSLAQGVPIGGE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 LDYLDDGTI A+R+R L Sbjct: 181 LDYLDDGTISAALRARRAL 199 >gi|315633852|ref|ZP_07889141.1| recombination protein R [Aggregatibacter segnis ATCC 33393] gi|315477102|gb|EFU67845.1| recombination protein R [Aggregatibacter segnis ATCC 33393] Length = 200 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENLI+ L +PG GP+SA+R HL+++ LA+ + +K+ C C Sbjct: 3 TSPLLENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDVCHICKNPRRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + +E+I A + T+EG TA+YI + +VK++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 MVDGTTLTHSFLGRREI 199 >gi|114320664|ref|YP_742347.1| recombination protein RecR [Alkalilimnicola ehrlichii MLHE-1] gi|122311667|sp|Q0A8I0|RECR_ALHEH RecName: Full=Recombination protein recR gi|114227058|gb|ABI56857.1| recombination protein RecR [Alkalilimnicola ehrlichii MLHE-1] Length = 199 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 114/194 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I+ LI+ L +PG GPRSA+R HL+++ LA A+ ++V C C Sbjct: 3 YSPLIDQLIESLRCLPGVGPRSAQRMAFHLLQRDRDGGRRLATAIREAMDQVGHCRQCRV 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C +C +RD S++ VVE AD++ALE++ LY VL G LSPLD +GPE + Sbjct: 63 LTEEPVCGLCASDRRDRSLLCVVEGPADVFALEQATDFRGLYFVLMGRLSPLDGVGPEAL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+ +++E+I A S T+EG+ T+HYI + V+ TR+A+G+PMG EL+Y Sbjct: 123 GLDRLEARLAEGEVQEVILATSPTVEGEATSHYIAELAHQRGVRTTRIAHGVPMGGELEY 182 Query: 186 LDDGTIFEAIRSRT 199 +D GT+ A R Sbjct: 183 VDSGTLSHAFAGRR 196 >gi|170749550|ref|YP_001755810.1| recombination protein RecR [Methylobacterium radiotolerans JCM 2831] gi|238688893|sp|B1M6N6|RECR_METRJ RecName: Full=Recombination protein recR gi|170656072|gb|ACB25127.1| recombination protein RecR [Methylobacterium radiotolerans JCM 2831] Length = 201 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 115/199 (57%), Positives = 157/199 (78%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++LAR+PG GPRSARRA L L+KK++ LLGPLA+AM +++ +C Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKRDTLLGPLADAMRVAADRIVVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + CGNVDT+DPC IC D +RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD + Sbjct: 61 TSCGNVDTSDPCTICRDAERDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + + SL+ER+ ++ E+I A++AT++GQTTAHY+ + ++ DVK+TRLA+G+P+G Sbjct: 121 RPEHLNLASLVERVARPEVTEVILALNATVDGQTTAHYVTESIRHCDVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIRSRT Sbjct: 181 GELDYLDEGTLSAAIRSRT 199 >gi|56460947|ref|YP_156228.1| recombinational DNA repair protein [Idiomarina loihiensis L2TR] gi|73621491|sp|Q5QWR1|RECR_IDILO RecName: Full=Recombination protein recR gi|56179957|gb|AAV82679.1| Recombinational DNA repair protein [Idiomarina loihiensis L2TR] Length = 201 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 111/195 (56%), Gaps = 1/195 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 I+ L++ L R+PG G +SA+R HL+++ LAE++ + KV C C + Sbjct: 4 SPAIDQLVENLKRLPGVGQKSAQRMAFHLLERDRGGASRLAESLQSAVEKVGHCECCRTL 63 Query: 67 DTTDPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C IC + +R+ V+ +VE AD+ A+E++ Y VL G LSPLD IGP DI Sbjct: 64 TEEPLCRICSNPMRRENGVLCIVETPADVLAIEQTSQFQGRYFVLMGHLSPLDGIGPADI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +++ + + E++ A + T+EG TAHYI D +++ TR+A+G+P+G EL Y Sbjct: 124 GLDELERQLQSEPVEEIVLATNPTVEGDATAHYIADIAAQLNINTTRIAHGVPVGGELGY 183 Query: 186 LDDGTIFEAIRSRTV 200 +D T+ A R Sbjct: 184 VDQTTLGHAFSGRKQ 198 >gi|323127674|gb|ADX24971.1| recombination protein RecR [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 198 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG Sbjct: 2 FYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCSICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDGKVTEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|295397255|ref|ZP_06807351.1| recombination protein R [Aerococcus viridans ATCC 11563] gi|294974502|gb|EFG50233.1| recombination protein R [Aerococcus viridans ATCC 11563] Length = 199 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI +++PG G ++A R ++ E + A ++ + ++ CS+CGN Sbjct: 3 YPEPIAKLIDSFSKLPGIGAKTASRLAFFVLDMPEADVLQFASSLVDAKRELRYCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D+ RD S I+VVE V D+ ++ER + + LYHVL G LSP++ GPED+ Sbjct: 63 ITQSDPCEICADENRDRSRILVVEQVRDVVSMERMREYHGLYHVLHGVLSPMEGTGPEDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 IQ L+ R++ +I+E+I A +AT EG+ TA Y+ +K ++++R+AYG+ +GS+++Y Sbjct: 123 NIQPLLTRLQDDQIKEVIVATNATAEGEATATYLSRLIKPAGIQVSRIAYGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A+ R + Sbjct: 183 ADEMTLLRALEGRRDI 198 >gi|312902588|ref|ZP_07761794.1| recombination protein RecR [Enterococcus faecalis TX0635] gi|310634258|gb|EFQ17541.1| recombination protein RecR [Enterococcus faecalis TX0635] Length = 198 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S+I+VVE+ D+ A+E+ + LYHVL G LSP++ GPEDI Sbjct: 63 IAEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEITLLKAVEGRREI 198 >gi|302336634|ref|YP_003801840.1| recombination protein RecR [Spirochaeta smaragdinae DSM 11293] gi|301633819|gb|ADK79246.1| recombination protein RecR [Spirochaeta smaragdinae DSM 11293] Length = 195 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 120/192 (62%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E LI+ L+R+PG G +SA R +L+K + LAE + + ++ C +CGN Sbjct: 4 LERLIRSLSRLPGVGRKSAARIAHYLLKADSAFVTRLAEEIGTLKERIHPCPVCGNFTED 63 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C++C D +RD + I VVE+ D+ +E + N L+HVLGG+++P++ +GP D+ I Sbjct: 64 ELCSVCSDPRRDGTQICVVEEPQDVATIESTGEYNGLFHVLGGAINPMNGVGPSDLSIDK 123 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L++R ++E+I A + T+EG TTA Y+ + LK ++++RLA G+P+G +L+Y D Sbjct: 124 LVKRASEGTVKEIIIATNPTVEGDTTALYLQNILKERPIEVSRLASGLPVGGDLEYADKL 183 Query: 190 TIFEAIRSRTVL 201 T+ + R RT L Sbjct: 184 TLARSFRGRTKL 195 >gi|210634535|ref|ZP_03298152.1| hypothetical protein COLSTE_02074 [Collinsella stercoris DSM 13279] gi|210158787|gb|EEA89758.1| hypothetical protein COLSTE_02074 [Collinsella stercoris DSM 13279] Length = 198 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 125/194 (64%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ L+ L R+PG GP+SA+R +L++ + LA+A+ + N+V CS C N Sbjct: 5 RSLQILLDELGRLPGIGPKSAQRIAYYLLEADAEEARRLADAILMVKNEVHFCSRCFNYA 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 T D CAIC D RD + I VV + D+ A+ER+ + + LYHVLGG +SP+D+IGP+ + + Sbjct: 65 TGDECAICEDMSRDRNRICVVGEPRDVTAIERTGSYHGLYHVLGGVISPMDKIGPDQLHV 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R+ + I E+I A + IEG+TTA Y+ +K + + +TRLA G+P+G +L+Y D Sbjct: 125 RELLARLGAEDIEEVIIATNPNIEGETTASYLARTIKPLGITVTRLASGLPVGGDLEYAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+ AI +R L Sbjct: 185 ELTLGRAIEARRAL 198 >gi|116511199|ref|YP_808415.1| DNA replication and repair protein RecR [Lactococcus lactis subsp. cremoris SK11] gi|123320630|sp|Q031X9|RECR_LACLS RecName: Full=Recombination protein recR gi|116106853|gb|ABJ71993.1| DNA replication and repair protein RecR [Lactococcus lactis subsp. cremoris SK11] Length = 198 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 127/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICG Sbjct: 2 YYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ +DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++ Sbjct: 62 NLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 122 INVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLAHGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ +R + Sbjct: 182 YADEVTLSKAVENRLEI 198 >gi|284036517|ref|YP_003386447.1| recombination protein RecR [Spirosoma linguale DSM 74] gi|283815810|gb|ADB37648.1| recombination protein RecR [Spirosoma linguale DSM 74] Length = 203 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 121/199 (60%), Gaps = 3/199 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K IE+ + ++++PG G ++A R LHL+K+ E+ LA+++ + V C Sbjct: 1 MEYPSKLIEDAVNEVSKLPGIGKKTALRLVLHLLKRDEEQTETLAQSLTAMRTNVKYCRK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC +RD S+I VVED D+ A+E + LYHVLGG +SP++ IGP Sbjct: 61 CHNLSDNEVCTICASNKRDQSLICVVEDTRDVLAIENTAQYRGLYHVLGGIISPVEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRE---LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 D+ I SL+ R+ + +I AIS T+EG TTA Y+ KLK ++KI+ +A G+P+ Sbjct: 121 SDLQIDSLMNRLRDAGSEQVREIILAISPTMEGDTTAFYLQKKLKPFNLKISTIARGVPI 180 Query: 180 GSELDYLDDGTIFEAIRSR 198 G +L+Y D+ T+ +I SR Sbjct: 181 GGDLEYADEVTLGRSILSR 199 >gi|218132672|ref|ZP_03461476.1| hypothetical protein BACPEC_00532 [Bacteroides pectinophilus ATCC 43243] gi|217992398|gb|EEC58401.1| hypothetical protein BACPEC_00532 [Bacteroides pectinophilus ATCC 43243] Length = 198 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + G +I LI+ L+ +PG G +SA+R H++ ++ + LA+ M N + V CS Sbjct: 1 MDLYGSQITKLIEELSALPGVGAKSAQRLAFHIINMPKERVEQLAQTMVNARSNVRYCSE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + ++ C +C +R+ VI+VVE D+ A E++ + +YHVL G++SP IGP Sbjct: 61 CYALTDSELCPVCSSTKRNHKVIMVVESTRDMAAYEKTGKYDGVYHVLHGAISPALGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ LI R+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 NDIKLKELITRL-AGDVDEVIIATNSSLEGETTAMYISKLVKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 180 LEYIDEVTLLRALEGRVDL 198 >gi|220934250|ref|YP_002513149.1| recombination protein RecR [Thioalkalivibrio sp. HL-EbGR7] gi|219995560|gb|ACL72162.1| recombination protein RecR [Thioalkalivibrio sp. HL-EbGR7] Length = 197 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 115/196 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L +PG GP+SA+R LHL+++ LA + + ++ C +C Sbjct: 1 MKSSLLDELIDALRCLPGVGPKSAQRMALHLLERDRPGGERLAAVLQDAMARIGHCKVCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C +C D R V+ VVE AD+ A+E++ YHVL G LSPLD IGPE+ Sbjct: 61 TLTEHELCRVCADPGRQRDVLCVVETPADVLAVEQATGFRGQYHVLLGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L R++ +IRE+I A S T EG+ TAHYI + + ++ TR+A+G+P+G EL+ Sbjct: 121 LGLDRLETRLDQGEIREVILATSTTAEGEVTAHYIGELARARGIRSTRIAHGVPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ A R Sbjct: 181 YVDRGTLSHAFEGRRE 196 >gi|281420173|ref|ZP_06251172.1| recombination protein RecR [Prevotella copri DSM 18205] gi|281405668|gb|EFB36348.1| recombination protein RecR [Prevotella copri DSM 18205] Length = 203 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 131/200 (65%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQ++ + +E + +++PG G ++A R L ++K+K + + A+ ++ + +V C Sbjct: 1 MQQQFSSTLLEKAVAEFSKLPGIGRKTALRLVLFMLKRKSEDVELFADTISRMRREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC D +RDAS I VVE+V D+ A+E ++ + LYHVLGG +SP+D I Sbjct: 61 RVCHNISDTDVCPICSDSRRDASTICVVENVQDVLAIENTQQFHGLYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I+SL++R+ ++E+IFA+S+T+EG TT YI KL VK++ +A GI +G Sbjct: 121 GPSDIEIESLVQRVAEGGVKEVIFALSSTMEGDTTNFYISRKLADYPVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSILNRTP 200 >gi|320159546|ref|YP_004172770.1| recombination protein RecR [Anaerolinea thermophila UNI-1] gi|319993399|dbj|BAJ62170.1| recombination protein RecR [Anaerolinea thermophila UNI-1] Length = 201 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI R+PG GP++A R ++++ +++ LAEA+ + ++ C +C N+ Sbjct: 5 PAPLEALITAFERLPGIGPKTASRLAFFILRQPDEVAQQLAEALLAVKSQTANCPVCFNI 64 Query: 67 DT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC D +RD S + VVED D+ +ER+ YHVL G L+P++ IGPE Sbjct: 65 MLAGQERCQICADPRRDESQLCVVEDPLDVLVIERTGGFLGRYHVLQGVLNPIEGIGPEQ 124 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ LIER++ ++RE+I A + ++EG TA Y+ +L + V+ITRLA G+PMG +L+ Sbjct: 125 LRIRPLIERVQEGRVREVIIATNPSMEGDATALYLRQQLAPLGVRITRLARGLPMGGDLE 184 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+ A+ R L Sbjct: 185 YADQNTLLRALAGRQEL 201 >gi|95928307|ref|ZP_01311055.1| recombination protein RecR [Desulfuromonas acetoxidans DSM 684] gi|95135578|gb|EAT17229.1| recombination protein RecR [Desulfuromonas acetoxidans DSM 684] Length = 199 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 82/194 (42%), Positives = 117/194 (60%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + LI L + PG G ++A R H++++ E+ L EA+ N+ +V CS C +V Sbjct: 6 PSLNRLIVELGKFPGIGRKTATRLAFHVMQQSEEQSQALVEAIQNLKQRVRFCSTCFHVT 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC +C RD S++ VVE DL A+ER + YHVL G LSPLD +GP+D+ I Sbjct: 66 EQDPCVLCTSTSRDDSLLCVVEQPQDLMAIERGHSYRGRYHVLHGVLSPLDGVGPDDLKI 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L+ER+ E+I A + +IEG+ TA Y+ L+ V+ITRLA+GIPMGS+L+Y+D Sbjct: 126 AELVERVRQGNFNEVIVATNFSIEGEATALYLSRLLQPFGVRITRLAHGIPMGSDLEYVD 185 Query: 188 DGTIFEAIRSRTVL 201 D T+ AI R L Sbjct: 186 DATVGRAIEGRRDL 199 >gi|332361734|gb|EGJ39538.1| recombination protein R [Streptococcus sanguinis SK1056] Length = 198 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELIYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD S I++VED D+ A+E + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDEDPCAICQDQSRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|302336479|ref|YP_003801686.1| DNA replication and repair protein RecR [Olsenella uli DSM 7084] gi|301320319|gb|ADK68806.1| DNA replication and repair protein RecR [Olsenella uli DSM 7084] Length = 207 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 123/195 (63%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 G+ ++ L+ L R+PG GP+SA+R L++ + L+ A+ + +V C +C + Sbjct: 13 GRALQRLLDELGRLPGIGPKSAQRIAYWLLEADVEAARRLSGAIMQVKQQVHFCPVCFSY 72 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T D C +C D RD I VV + D+ A+ER+ A + LYHVLGG +SP+D+IGP+ + Sbjct: 73 ATRDTCDVCADLSRDRGTICVVSEPRDVSAIERTGAYHGLYHVLGGVISPMDKIGPDQLH 132 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 ++ L++R+ + ++E+I A + +EG+TTA Y+ ++ + V ++RLA G+P+G +L+Y Sbjct: 133 VKELLQRLADESVKEVILATNPDVEGETTATYLSRVIRPLGVAVSRLASGLPVGGDLEYA 192 Query: 187 DDGTIFEAIRSRTVL 201 D+ T+ AI +R + Sbjct: 193 DEVTLGRAIEARRTI 207 >gi|298345778|ref|YP_003718465.1| recombination protein RecR [Mobiluncus curtisii ATCC 43063] gi|304390522|ref|ZP_07372475.1| recombination protein R [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654367|ref|ZP_07907275.1| recombination protein R [Mobiluncus curtisii ATCC 51333] gi|315657728|ref|ZP_07910608.1| recombination protein R [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235839|gb|ADI66971.1| recombination protein RecR [Mobiluncus curtisii ATCC 43063] gi|304326278|gb|EFL93523.1| recombination protein R [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491402|gb|EFU81019.1| recombination protein R [Mobiluncus curtisii ATCC 51333] gi|315491525|gb|EFU81136.1| recombination protein R [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 200 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 120/200 (60%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 +I + +++LI L ++PG GP+SA+R ++ E + L EA+ ++ KV C Sbjct: 1 MNQIFTEALQDLIDALGKMPGVGPKSAQRIAFWVLSADEADIKRLTEALTSVKEKVHFCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +CGN+ CAIC D +RD S+I VVE D+ +LER++ LYHVLGG+L P++ IG Sbjct: 61 VCGNITEHPVCAICQDSRRDQSLICVVEQATDIVSLERTRMYRGLYHVLGGALDPINGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+ + I L+ R++ I+E+I A EG+ TA Y+ L I + +RLA G+P+G Sbjct: 121 PDQLRIAGLMTRLQDSAIKEVIIATDPNTEGEATAAYLARMLATIGIPASRLASGLPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ A+ R L Sbjct: 181 DLEYADEVTLGRALEGRRRL 200 >gi|317488825|ref|ZP_07947357.1| recombination protein RecR [Eggerthella sp. 1_3_56FAA] gi|316912079|gb|EFV33656.1| recombination protein RecR [Eggerthella sp. 1_3_56FAA] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I+ L+ L R+PG GP+SA+R ++ + L+EA+A + V CS C Sbjct: 2 YAVPSIQKLLDELERLPGVGPKSAQRIAYWILNADKATALRLSEAIAEVKETVRFCSRCF 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D C IC +RDA +I VV + D+ +ER+ N +YHVLGG+LSP++ IGP++ Sbjct: 62 NYAEDDLCEICQSSKRDAGIICVVSEPRDIPPIERTAVYNGVYHVLGGALSPMEGIGPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L++R+ ++RE++ A + +EG+TTA Y+ +K + + +TR A G+P+G +L+ Sbjct: 122 LRIAQLMKRLASDEVREVVLATNPNVEGETTATYLARLIKPLGIAVTRPASGLPVGGDLE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 + D+ T+ AI +R L Sbjct: 182 FADEVTLGRAIEARRPL 198 >gi|325663667|ref|ZP_08152071.1| recombination protein recR [Lachnospiraceae bacterium 4_1_37FAA] gi|331087181|ref|ZP_08336251.1| recombination protein recR [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470160|gb|EGC73393.1| recombination protein recR [Lachnospiraceae bacterium 4_1_37FAA] gi|330408867|gb|EGG88328.1| recombination protein recR [Lachnospiraceae bacterium 9_1_43BFAA] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L+R+PG G +SA R H++ + + LA + N V C+ Sbjct: 1 MDYYSSQISKLIEELSRLPGIGAKSAGRLAFHIINMPKDQVERLASTLVEARNNVRYCAQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC +RD I+VVE DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CCTLTDKELCPICGSNKRDQRTIMVVETTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ER+ + E+I A ++++EG+TTA Y+ +K +K++R+A G+P+G + Sbjct: 121 GDIKLKELMERL-QGDVDEVIIATNSSLEGETTAMYLSKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTQL 198 >gi|225870068|ref|YP_002746015.1| recombination protein RecR [Streptococcus equi subsp. equi 4047] gi|254790784|sp|C0M8S3|RECR_STRE4 RecName: Full=Recombination protein recR gi|225699472|emb|CAW92992.1| recombination protein RecR [Streptococcus equi subsp. equi 4047] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG Sbjct: 2 LYPIPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD +I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCHICTDSSRDKEIILVVEDSKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ + E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMAGEATEVIVATNATADGEATAMYISRLLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|326795604|ref|YP_004313424.1| recombination protein recR [Marinomonas mediterranea MMB-1] gi|326546368|gb|ADZ91588.1| Recombination protein recR [Marinomonas mediterranea MMB-1] Length = 197 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ L++ L +PG GP+SA++ L+L+++ Q LA A+ + +KV C+ C Sbjct: 1 MFSPLIKELMESLRCLPGVGPKSAQKMALYLLERDSQGADRLANALRDALDKVGRCATCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C+IC+DQ RD + + +VE AD+ A+E + + + Y VL G LSP+D IGPE+ Sbjct: 61 TLTEDTECSICLDQARDGTRLCIVETPADVIAMENAGSFDGRYFVLLGHLSPIDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + E+I A ++TIEG+ T+HYI + LK ++++++RLA G+PMG EL+ Sbjct: 121 LGLDRLENLVRNTDVEEVIIATNSTIEGEATSHYISELLKPLNIELSRLAQGVPMGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A++ R L Sbjct: 181 YVDGNTLALALKGRKKL 197 >gi|157151011|ref|YP_001450727.1| recombination protein RecR [Streptococcus gordonii str. Challis substr. CH1] gi|189029380|sp|A8AY67|RECR_STRGC RecName: Full=Recombination protein recR gi|157075805|gb|ABV10488.1| recombination protein RecR [Streptococcus gordonii str. Challis substr. CH1] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELSYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D+ RD S I++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCAICRDESRDQSTILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLIRAIENRTEL 198 >gi|86606039|ref|YP_474802.1| recombination protein RecR [Synechococcus sp. JA-3-3Ab] gi|123506557|sp|Q2JUS3|RECR_SYNJA RecName: Full=Recombination protein recR gi|86554581|gb|ABC99539.1| recombination protein RecR [Synechococcus sp. JA-3-3Ab] Length = 199 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 84/198 (42%), Positives = 124/198 (62%), Gaps = 2/198 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG G ++A+R LHL+ + + LA+A+ V CSIC Sbjct: 1 MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N DPC IC QRD S VV DV DL A+ER++ LYHVLGG +SP++ IG E Sbjct: 61 NWSAEDPCEICRSPQRDPSTWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSE 182 + I+ L+ R+ +K +ELIFA+S ++EG+ T H + D LK +++TRLA+G+PMGSE Sbjct: 121 LRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLKPVAPGLRMTRLAFGLPMGSE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ A+ +R Sbjct: 181 LEYADEVTLARALEARQE 198 >gi|22536930|ref|NP_687781.1| recombination protein RecR [Streptococcus agalactiae 2603V/R] gi|25010841|ref|NP_735236.1| recombination protein RecR [Streptococcus agalactiae NEM316] gi|76787474|ref|YP_329513.1| recombination protein RecR [Streptococcus agalactiae A909] gi|76798440|ref|ZP_00780679.1| recombination protein RecR [Streptococcus agalactiae 18RS21] gi|77406741|ref|ZP_00783778.1| recombination protein RecR [Streptococcus agalactiae H36B] gi|77409082|ref|ZP_00785798.1| recombination protein RecR [Streptococcus agalactiae COH1] gi|77412466|ref|ZP_00788769.1| recombination protein RecR [Streptococcus agalactiae CJB111] gi|77414688|ref|ZP_00790822.1| recombination protein RecR [Streptococcus agalactiae 515] gi|73621516|sp|Q8E641|RECR_STRA3 RecName: Full=Recombination protein recR gi|73621517|sp|Q8E0G7|RECR_STRA5 RecName: Full=Recombination protein recR gi|123602003|sp|Q3K1U0|RECR_STRA1 RecName: Full=Recombination protein recR gi|22533782|gb|AAM99653.1|AE014226_13 recombination protein RecR [Streptococcus agalactiae 2603V/R] gi|23095220|emb|CAD46430.1| Unknown [Streptococcus agalactiae NEM316] gi|76562531|gb|ABA45115.1| recombination protein RecR [Streptococcus agalactiae A909] gi|76586202|gb|EAO62721.1| recombination protein RecR [Streptococcus agalactiae 18RS21] gi|77159266|gb|EAO70443.1| recombination protein RecR [Streptococcus agalactiae 515] gi|77161484|gb|EAO72492.1| recombination protein RecR [Streptococcus agalactiae CJB111] gi|77172299|gb|EAO75452.1| recombination protein RecR [Streptococcus agalactiae COH1] gi|77174646|gb|EAO77478.1| recombination protein RecR [Streptococcus agalactiae H36B] gi|319744790|gb|EFV97130.1| recombination protein R [Streptococcus agalactiae ATCC 13813] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD SVI+VVED D+ A+E+ + N LYHVL G +SP++ I P+D Sbjct: 62 NLTDDDPCLICTDKTRDQSVILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|125623229|ref|YP_001031712.1| recombination protein recR [Lactococcus lactis subsp. cremoris MG1363] gi|166221946|sp|A2RI71|RECR_LACLM RecName: Full=Recombination protein recR gi|124492037|emb|CAL96964.1| Recombination protein recR [Lactococcus lactis subsp. cremoris MG1363] gi|300069980|gb|ADJ59380.1| recombination protein RecR [Lactococcus lactis subsp. cremoris NZ9000] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICG Sbjct: 2 YYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLRFCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ +DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++ Sbjct: 62 NLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 122 INVKSLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ +R + Sbjct: 182 YADEVTLSKAVENRLEI 198 >gi|163851065|ref|YP_001639108.1| recombination protein RecR [Methylobacterium extorquens PA1] gi|218529895|ref|YP_002420711.1| recombination protein RecR [Methylobacterium chloromethanicum CM4] gi|240138199|ref|YP_002962671.1| recombination protein recR [Methylobacterium extorquens AM1] gi|254560759|ref|YP_003067854.1| recombination protein recR [Methylobacterium extorquens DM4] gi|238687346|sp|A9W381|RECR_METEP RecName: Full=Recombination protein recR gi|254790775|sp|B7KVW7|RECR_METC4 RecName: Full=Recombination protein recR gi|163662670|gb|ABY30037.1| recombination protein RecR [Methylobacterium extorquens PA1] gi|218522198|gb|ACK82783.1| recombination protein RecR [Methylobacterium chloromethanicum CM4] gi|240008168|gb|ACS39394.1| recombination protein recR [Methylobacterium extorquens AM1] gi|254268037|emb|CAX23908.1| recombination protein recR [Methylobacterium extorquens DM4] Length = 201 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 112/199 (56%), Positives = 149/199 (74%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM ++ +C Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRVAAERIVVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD + Sbjct: 61 RSCGNVDTSDPCTICRDETRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L+ER ++E+I A++AT++GQTTAHY+ + +K + +TRLA+G+P+G Sbjct: 121 RPEHLTIARLVERAGEPGVKEIILALNATVDGQTTAHYVTESIKPFGLTVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIRSRT Sbjct: 181 GELDYLDEGTLTAAIRSRT 199 >gi|167759646|ref|ZP_02431773.1| hypothetical protein CLOSCI_02004 [Clostridium scindens ATCC 35704] gi|167662772|gb|EDS06902.1| hypothetical protein CLOSCI_02004 [Clostridium scindens ATCC 35704] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ LI+ L+ +PG G +SA R HL+ + LA M V C+ Sbjct: 1 MDYYSSQMSKLIEELSCLPGIGSKSAARLAFHLIHMPLDDVKRLASTMVEARENVRYCAQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC + RD I+VVE+ DL A E++ N +YHVL G++SP+ IGP Sbjct: 61 CYTLTDQELCPICSNSSRDHKTIMVVENTRDLAAYEKTGKYNGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ LIER+ + E+I A ++++EG+TTA YI +K +K++R+A G+P+G + Sbjct: 121 EDIKLKELIERL-QGDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ RT L Sbjct: 180 LEYIDEVTLLRALEGRTQL 198 >gi|302530932|ref|ZP_07283274.1| recombination protein RecR [Streptomyces sp. AA4] gi|302439827|gb|EFL11643.1| recombination protein RecR [Streptomyces sp. AA4] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 118/198 (59%), Gaps = 1/198 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + L + + + V C ICG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQDVLGKVKEGVQFCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D++RD +VI VVE+ D+ A+ER++ YHVLGG+L PL IGPE Sbjct: 61 NVSEQETCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183 + ++ L++RI ++E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L Sbjct: 121 LRMRQLLQRIGEADVKEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDL 180 Query: 184 DYLDDGTIFEAIRSRTVL 201 ++ D+ T+ A+ R L Sbjct: 181 EFADELTLGRALSGRRAL 198 >gi|308235603|ref|ZP_07666340.1| recombination protein RecR [Gardnerella vaginalis ATCC 14018] gi|311113931|ref|YP_003985152.1| recombination protein R [Gardnerella vaginalis ATCC 14019] gi|310945425|gb|ADP38129.1| recombination protein R [Gardnerella vaginalis ATCC 14019] Length = 202 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 116/192 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I +I +++PG GP+ A+R +++ + L A++++ V C ICGNV Sbjct: 10 AIGRVIDAFSKLPGIGPKGAQRIAFYILSSSDVQTQDLIGAISDLRENVRFCEICGNVCE 69 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC IC D +RD + I VVE+ D+ ++ER+ +YHVLGG+++P+ +GP D+ I Sbjct: 70 QSPCVICQDPRRDHTKICVVEEPKDIMSIERTHEYAGVYHVLGGAINPMANVGPADLKIT 129 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ER++ +++E+I A+ IEG+ T Y+ L+ +D+ ITRLA G+P+G +L+Y D+ Sbjct: 130 QLLERLKDAQVKEVILALDPNIEGEATVTYLARLLEPLDISITRLASGLPVGGDLEYADE 189 Query: 189 GTIFEAIRSRTV 200 T+ A R Sbjct: 190 ITLGRAFAGRQE 201 >gi|108758594|ref|YP_630174.1| recombination protein RecR [Myxococcus xanthus DK 1622] gi|123247980|sp|Q1DAZ9|RECR_MYXXD RecName: Full=Recombination protein recR gi|108462474|gb|ABF87659.1| recombination protein RecR [Myxococcus xanthus DK 1622] Length = 197 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 +T + L+ LA++PG G ++A+R H+++ + L++A+ + KV LC C Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRAPGEYAAELSQAIREVKEKVHLCVRCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C C D +RD V+ VVE ADL ALER++ YHVL G LSPL+ +GP+ Sbjct: 61 SLTDAETCNFCRDARRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGVGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ER+ ++ ELI A + +EG+ TA Y+ LK + +++TR+A G+PMG +L+ Sbjct: 121 LRIRELLERLNDSRVEELILATNPDVEGEATALYLTRLLKPMGLRVTRIAQGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D T+ +A+ +R L Sbjct: 181 FADQATLAKALSARRDL 197 >gi|291006687|ref|ZP_06564660.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 2338] gi|172044197|sp|A4F6D1|RECR_SACEN RecName: Full=Recombination protein recR Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + + L E + + V C ICG Sbjct: 1 MYEGPVQDLIDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSEEPTCRICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183 + ++ L+ RI +I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L Sbjct: 121 LRVRELLTRIGRDEITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDL 180 Query: 184 DYLDDGTIFEAIRSRT 199 ++ D+ T+ A+ R Sbjct: 181 EFADELTLGRALSGRR 196 >gi|188580848|ref|YP_001924293.1| recombination protein RecR [Methylobacterium populi BJ001] gi|238692886|sp|B1ZGA0|RECR_METPB RecName: Full=Recombination protein recR gi|179344346|gb|ACB79758.1| recombination protein RecR [Methylobacterium populi BJ001] Length = 201 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 114/199 (57%), Positives = 151/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM +++ +C Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRIAADRIVVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD + Sbjct: 61 HACGNVDTSDPCTICRDETRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L+ER ++E+I A++AT++GQTTAHY+ + LK + + ITRLA+G+P+G Sbjct: 121 RPEHLTIALLVERASAPGVKEIILALNATVDGQTTAHYVTESLKPLGLTITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIRSRT Sbjct: 181 GELDYLDEGTLTAAIRSRT 199 >gi|317970378|ref|ZP_07971768.1| DNA replication and repair protein RecR [Synechococcus sp. CB0205] Length = 228 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI R+PG GPR+A+R LHL+ + + + A+A+ ++V C C + Sbjct: 33 FTRPLARLIDQFERLPGIGPRTAQRLALHLLNQPSEQIQAFADALLAARSQVGQCQRCFH 92 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC +++R V+ VV D DL ALER++ YHVLGG +SP+D IGPE + Sbjct: 93 LSADPLCEICRNEERSTGVLCVVADSRDLLALERTREFKGSYHVLGGLISPMDGIGPELL 152 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 IQ L+ER++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y Sbjct: 153 HIQPLVERVDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEY 211 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A+ R + Sbjct: 212 ADEVTLARALEGRRRM 227 >gi|148241900|ref|YP_001227057.1| recombination protein RecR [Synechococcus sp. RCC307] gi|172047803|sp|A5GS45|RECR_SYNR3 RecName: Full=Recombination protein recR gi|147850210|emb|CAK27704.1| Recombination protein RecR [Synechococcus sp. RCC307] Length = 215 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 126/195 (64%), Gaps = 1/195 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ R+PG GPR+A+R LHL+++ E+ A+A+ +V C CG Sbjct: 19 VFTRPLARLIEQFERLPGIGPRTAQRLALHLLRQPEEQSRAFADALLAARQQVGQCQRCG 78 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ C IC + +R+ VI VV D DL ALER++ + YHVLGG +SP+D IGPE Sbjct: 79 HLSADPICDICRNPERNIGVICVVADSRDLLALERTREFSGSYHVLGGLISPMDGIGPEA 138 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GIQ L++R++ +++ E+I A++ ++EG TT+ Y+ LK ++TR+AYG+P+GSEL+ Sbjct: 139 LGIQPLLQRLDPEQVEEVILALTPSVEGDTTSLYLARLLKPFC-RVTRIAYGLPVGSELE 197 Query: 185 YLDDGTIFEAIRSRT 199 Y DD T+ A+ R Sbjct: 198 YADDVTLARALEGRR 212 >gi|160878209|ref|YP_001557177.1| recombination protein RecR [Clostridium phytofermentans ISDg] gi|189029358|sp|A9KQC9|RECR_CLOPH RecName: Full=Recombination protein recR gi|160426875|gb|ABX40438.1| recombination protein RecR [Clostridium phytofermentans ISDg] Length = 198 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I LI+ L R+PG G +SA+R H++ ++ + LA+ M + + V C + Sbjct: 1 MDYYSTQISKLIEELGRLPGIGAKSAQRLAFHIINMPKEQVEHLAKTMLDARSNVKYCKV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC ++RD VI+VVE+ DL A E++ + +YHVL G++SP+ IGP Sbjct: 61 CQTLTDKEICPICSSEKRDQKVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI ++ L+ R+ + E+I A ++++EG+ TA YI +K +K++R+A G+P+G + Sbjct: 121 QDIKLKELMLRL-QGDVDEVIIATNSSLEGEATAMYISKLIKPAGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D+ T+ A+ R L Sbjct: 180 LEYIDEVTLLRALDGRIQL 198 >gi|120554531|ref|YP_958882.1| recombination protein RecR [Marinobacter aquaeolei VT8] gi|166221947|sp|A1U126|RECR_MARAV RecName: Full=Recombination protein recR gi|120324380|gb|ABM18695.1| DNA replication and repair protein RecR [Marinobacter aquaeolei VT8] Length = 200 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 117/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ L++ L +PG G ++A+R HL+++ LA A+ + + V C C N Sbjct: 3 FSPLVDELVESLRCLPGVGQKTAQRMAFHLLERGRSGGTRLAAALNHAMDGVRRCDSCQN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 T+ C IC +R + VVE +DL A+E++ Y VL G LSP+D +GPE+I Sbjct: 63 FSDTEICQICEKPERRNGTLCVVESPSDLLAIEQAGDYKGSYFVLMGHLSPIDGVGPEEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI+ L++R+ + + ELI A + T+EG+ TAHYI D+L G ++ ITRLA+GIP+G EL Y Sbjct: 123 GIERLLDRVRREGVTELILATNPTVEGEATAHYIADRLDGQNILITRLAHGIPVGGELGY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A R R L Sbjct: 183 VDGFTLTHAFRGRKPL 198 >gi|119505874|ref|ZP_01627939.1| recombination protein RecR [marine gamma proteobacterium HTCC2080] gi|119458302|gb|EAW39412.1| recombination protein RecR [marine gamma proteobacterium HTCC2080] Length = 204 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 81/195 (41%), Positives = 122/195 (62%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 I +LI+ L +PG GP+SA+R TLHL+++ Q L+ A++ +V C C N Sbjct: 4 SPSINDLIEALRCLPGVGPKSAQRMTLHLLERDRQGAETLSGALSQALERVGRCKSCRNF 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C +C D +RD +++ VVE D+ ALE++ + LY VL G LSP+D IGPEDIG Sbjct: 64 TELELCELCSDPRRDHTLLCVVEAPGDVMALEQTASFRGLYFVLMGHLSPIDGIGPEDIG 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER + IRE+I A + T+EG+ TA YI + + D+ ++R+A+G+P+G EL+YL Sbjct: 124 LDRLEERFRSEAIREVILATNPTVEGEATAFYIAQRAQQEDIAVSRIAHGVPLGGELEYL 183 Query: 187 DDGTIFEAIRSRTVL 201 D T+ A+ RT L Sbjct: 184 DASTLAHALSGRTPL 198 >gi|29377240|ref|NP_816394.1| recombination protein RecR [Enterococcus faecalis V583] gi|227554248|ref|ZP_03984295.1| recombination protein RecR [Enterococcus faecalis HH22] gi|73621483|sp|Q830L4|RECR_ENTFA RecName: Full=Recombination protein recR gi|29344706|gb|AAO82464.1| recombination protein RecR [Enterococcus faecalis V583] gi|227176608|gb|EEI57580.1| recombination protein RecR [Enterococcus faecalis HH22] gi|315573803|gb|EFU85994.1| recombination protein RecR [Enterococcus faecalis TX0309B] gi|315580315|gb|EFU92506.1| recombination protein RecR [Enterococcus faecalis TX0309A] Length = 198 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 124/196 (63%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG G ++A R + + KE+ A+A+ ++ + CSICGN Sbjct: 3 YPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S+I+VVE+ D+ ++E+ + LYHVL G LSP++ GPEDI Sbjct: 63 ITEEDPCEICQDKNRDRSIILVVEEPKDVMSMEKMREYQGLYHVLHGVLSPMEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R+ +++E+I A +AT EG+ TA Y+ +K + +TRLA+G+ +GS+++Y Sbjct: 123 NIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEITLLKAVEGRREI 198 >gi|307294615|ref|ZP_07574457.1| recombination protein RecR [Sphingobium chlorophenolicum L-1] gi|306879089|gb|EFN10307.1| recombination protein RecR [Sphingobium chlorophenolicum L-1] Length = 198 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 103/197 (52%), Positives = 146/197 (74%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EIE L + L+R+PG GPRSARRA LHL+KK+E L PL A+ + +++ C ICG Sbjct: 1 MASPEIEALTQALSRLPGLGPRSARRAVLHLLKKRESALEPLLRALDAVNDRLVTCGICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT DPC IC D +RDA + VVEDVADLWAL++S+ +HVLGG LS L+ + PED Sbjct: 61 NVDTVDPCGICADPRRDARALCVVEDVADLWALDKSRLFPGRFHVLGGRLSALEGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ V++T+LA+G+P+G ELD Sbjct: 121 LSIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPVRLTQLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLD+GT+ +A+R+R L Sbjct: 181 YLDEGTLAQALRARRPL 197 >gi|322372540|ref|ZP_08047076.1| recombination protein RecR [Streptococcus sp. C150] gi|321277582|gb|EFX54651.1| recombination protein RecR [Streptococcus sp. C150] Length = 198 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC D+ RD + I+VVED D+ A+E+ + + LYHVL G +SP++ IGP+D Sbjct: 62 RLTDDDPCNICTDETRDRTKILVVEDSKDVSAMEKIQEYHGLYHVLQGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVEEVIIATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|94985613|ref|YP_604977.1| recombination protein RecR [Deinococcus geothermalis DSM 11300] gi|166221935|sp|Q1IY76|RECR_DEIGD RecName: Full=Recombination protein recR gi|94555894|gb|ABF45808.1| recombination protein RecR [Deinococcus geothermalis DSM 11300] Length = 222 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 114/194 (58%), Gaps = 2/194 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L+R+PG GP+SA+R +L ++ + + LA A+ + C +C N Sbjct: 3 YPPSLVGLIRELSRLPGIGPKSAQRLAFYLFEQPREDIERLAGAILEAKRDLHTCPVCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD SVI VVE+ D+ A+ERS LYHVL G+LSP++ +GP+ + Sbjct: 63 ITDAERCDVCSDPTRDQSVICVVEEPGDVIAIERSGEYRGLYHVLHGALSPMNGVGPDRL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ + E+I A T+EG TA Y+ L+ + ++R+AYG+P+G L+Y Sbjct: 123 QIRPLLPRV--QDGMEVILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGALEY 180 Query: 186 LDDGTIFEAIRSRT 199 D+ T+ A+ R Sbjct: 181 ADEVTLGRALSGRR 194 >gi|326802967|ref|YP_004320785.1| recombination protein RecR [Aerococcus urinae ACS-120-V-Col10a] gi|326651053|gb|AEA01236.1| recombination protein RecR [Aerococcus urinae ACS-120-V-Col10a] Length = 198 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R ++ + + AEA+ + ++ CS+CGN Sbjct: 3 YPEPIARLIDSFKKLPGIGAKTAARLAFFVLDMDQADVNDFAEALNRVKQEMTTCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V DPC IC D R+ SV++VVE+ D+ A+ER + + YHVL G LSP+D GP+D+ Sbjct: 63 VTQEDPCLICRDNDREGSVLMVVEEARDVMAMERMQNYHGKYHVLHGVLSPMDGTGPDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL++R++ +I+E+I A +AT EG+ TA Y+ +K +K++R+AYG+ +GS+++Y Sbjct: 123 NIRSLLQRLQDTQIQEVIIATNATAEGEATATYLARLIKPAQIKVSRIAYGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A+ R L Sbjct: 183 ADEMTLMRALDGRQEL 198 >gi|229825855|ref|ZP_04451924.1| hypothetical protein GCWU000182_01219 [Abiotrophia defectiva ATCC 49176] gi|229789875|gb|EEP25989.1| hypothetical protein GCWU000182_01219 [Abiotrophia defectiva ATCC 49176] Length = 199 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 125/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 GK++ L++ L+++PG G ++A R H++ ++ + L+ A++ VC C Sbjct: 1 MDYYGKQVNKLVEELSKLPGIGVKTAGRLAFHIIGMPKENVEALSLAISQAKENVCYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D++R+ ++I+VVE+V DL A E++K + +YHVL G +SPL IGP Sbjct: 61 CFTLTDSPLCPICADKERNHNMIMVVENVRDLAAYEKTKKYDGVYHVLHGVISPLLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI ++ L+ R++ + E+I A +++EG+TTA YI +K +K+TR+A G+P+G + Sbjct: 121 ADIKLKELMVRLQNNDVEEVIIATGSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D+ T+ A RTVL Sbjct: 181 LENIDEVTLLRAFVGRTVL 199 >gi|167762859|ref|ZP_02434986.1| hypothetical protein BACSTE_01222 [Bacteroides stercoris ATCC 43183] gi|167699199|gb|EDS15778.1| hypothetical protein BACSTE_01222 [Bacteroides stercoris ATCC 43183] Length = 205 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 127/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ + A+ + ++V C Sbjct: 1 MNGQYPSTLLEKAVNEFAKLPGIGRKTAMRLVLHLLRQDTAAVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLEIESLVQRVAAGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRTP 200 >gi|325288354|ref|YP_004264535.1| DNA replication and repair protein RecR [Syntrophobotulus glycolicus DSM 8271] gi|324963755|gb|ADY54534.1| DNA replication and repair protein RecR [Syntrophobotulus glycolicus DSM 8271] Length = 198 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 122/201 (60%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + +LI +R+PG GP++A R + ++ ++ L++A++ + C Sbjct: 1 MDFFYYPQPLADLIAAFSRLPGIGPKTAGRLAFYALQHADE-ATGLSKAISAALKDIRYC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SICGN +DPC IC +R+ ++ VVE D+ ALE++ LYHVL G LSP++ I Sbjct: 60 SICGNYTDSDPCRICSSPKRNREILCVVEQSRDVVALEKTGEYKGLYHVLHGVLSPMEGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I L+ R+E E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G Sbjct: 120 GPEQLNIGGLLSRLEGVS--EIVIAVNPTVEGEATALYLARLLKPLQIKVTRIAHGLPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ++L+Y D+ TI A+ R L Sbjct: 178 ADLEYADEVTIARALEGRRPL 198 >gi|315605706|ref|ZP_07880739.1| recombination protein R [Actinomyces sp. oral taxon 180 str. F0310] gi|315312661|gb|EFU60745.1| recombination protein R [Actinomyces sp. oral taxon 180 str. F0310] Length = 197 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +LI ++PG GP+SA+R +H++ + + L EA+ + +V C +C Sbjct: 1 MYDGALADLIDQFGQLPGIGPKSAQRMAMHVLDADPEEVARLVEAINAVRGRVRHCDVCA 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C+IC D +RD S I VV++ D+ A+E ++ YHVLGG + P+ IGP+ Sbjct: 61 NLTEDDQCSICRDVRRDPSQICVVQEPKDIQAIEGARVFRGRYHVLGGVIDPIHGIGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL+ R+ + E+I A + +EG+ TA Y+ L + V+ +RLA G+PMG +L+ Sbjct: 121 LNIASLMSRLADGTVTEVILATNPNVEGEATAAYLARMLSTMGVETSRLAMGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+ A+ R L Sbjct: 181 YADSVTLGRALEGRRRL 197 >gi|317055946|ref|YP_004104413.1| recombination protein RecR [Ruminococcus albus 7] gi|315448215|gb|ADU21779.1| recombination protein RecR [Ruminococcus albus 7] Length = 200 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 115/189 (60%) Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72 L + A++PG G +SA+R H+++ ++ A A+ N++ V LC C N C Sbjct: 12 LTEQFAKLPGIGMKSAQRLAYHVMRMSDKDAEAFANAVLNVHKNVHLCKECQNYTDRQLC 71 Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC D +RD VI VVE D+ A+ER+ +YHVL G +SP++ + P+D+ I+ L+ Sbjct: 72 PICDDDRRDHGVICVVESPQDITAIERTGEYKGVYHVLHGLISPINGVSPDDLKIKELLA 131 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 RI E+I A + T+EG TA YI LK + VK+TRLA+G+P+G +L+Y D+ T++ Sbjct: 132 RINSGTADEVIMATNPTVEGDATAFYISKLLKPLGVKVTRLAFGLPIGGQLEYADEITLY 191 Query: 193 EAIRSRTVL 201 +A+ +R + Sbjct: 192 KALENRNEI 200 >gi|320546372|ref|ZP_08040688.1| recombination protein R [Streptococcus equinus ATCC 9812] gi|320448982|gb|EFW89709.1| recombination protein R [Streptococcus equinus ATCC 9812] Length = 206 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG G ++A R + + ++ + A+ + + ++ CSICG Sbjct: 10 LYPAPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLSAKRELTYCSICG 69 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC D+ R SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D Sbjct: 70 NLTDDDPCSICTDKTRKRSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 129 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++ Sbjct: 130 INLKSLITRLMDSEVSEVIIATNATADGEATAMYISRVLKPAGIKVTRLARGLAVGSDIE 189 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 190 YADEVTLLRAIENRTEL 206 >gi|310826416|ref|YP_003958773.1| recombination protein RecR [Eubacterium limosum KIST612] gi|308738150|gb|ADO35810.1| recombination protein RecR [Eubacterium limosum KIST612] Length = 199 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K IE L+ L ++PG G ++A+R HL+ + + L+ A+ N+ +K+ LC Sbjct: 1 MGFYPKAIERLVTELGKLPGIGEKTAQRLAFHLIDAPAEEIEGLSNALLNVKDKIRLCPE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ D C +C D R+ VI VV+ D++A+E+++ N LYHVL G +SPL+ IGP Sbjct: 61 CFSITDGDRCDVCADPNRNRRVICVVQSTKDIFAIEKTREYNGLYHVLHGVISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI + L+ RI I E+I A + T EG+ TA Y+ + + + VK+TRLA GIP+G++ Sbjct: 121 QDIKAKELLLRIGENDIEEVIMATNPTPEGEATAMYLGNLISPLGVKVTRLAKGIPIGAD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 ++Y+D+ T+ +A R + Sbjct: 181 VEYIDEITLIKAFEGRNTI 199 >gi|28493676|ref|NP_787837.1| recombination protein RecR [Tropheryma whipplei str. Twist] gi|73621529|sp|Q83MQ8|RECR_TROWT RecName: Full=Recombination protein recR gi|28476718|gb|AAO44806.1| recombination protein [Tropheryma whipplei str. Twist] Length = 198 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 127/197 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +++LI+ L ++PG GP+SA+R T +++ + L+E + ++ +V C +CG Sbjct: 1 MYVRIVQDLIRELGKLPGIGPKSAQRITFFILQNPSFDIDRLSETLQSVRKQVQFCKVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D C IC D +RD VI VVE+ D+ A+E+++ + LYHVLGG++SP+D +GP+D Sbjct: 61 NFSEEDECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R+ I E++ A +EG+ TA YI + + +++++LA G+P+GS+L+ Sbjct: 121 LNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R + Sbjct: 181 YADEITLGRALEGRQYI 197 >gi|23016070|ref|ZP_00055830.1| COG0353: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 197 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 111/195 (56%), Positives = 143/195 (73%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE LI++L+R+PG GPRSARRA L LV+K+E LL PL +AMA KV CS+CG Sbjct: 1 MVGPEIERLIQLLSRLPGLGPRSARRAALRLVEKRESLLIPLGQAMAEAAAKVRTCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N DT DPCAIC D +RD S++ VVEDVA LWA+ER+ + Y VLGG LS LD IGPED Sbjct: 61 NFDTIDPCAICADHRRDPSMLCVVEDVAGLWAMERTGSFKGRYAVLGGLLSALDGIGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI SL+ R + E+I A AT+EGQTTAHY+ ++L +V ++ LA+G+P+G ELD Sbjct: 121 LGIDSLVARAADDTVTEVILATPATVEGQTTAHYLAERLAPCNVTVSGLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRT 199 +LDDGTI A+R+R Sbjct: 181 HLDDGTITAALRARR 195 >gi|254293233|ref|YP_003059256.1| recombination protein RecR [Hirschia baltica ATCC 49814] gi|254041764|gb|ACT58559.1| recombination protein RecR [Hirschia baltica ATCC 49814] Length = 199 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 106/199 (53%), Positives = 141/199 (70%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + G EI LI++++++PG GPRSARRA LHL+KK EQLL P+A AMA+ KV C Sbjct: 1 MSNRSVGPEITRLIEMMSKLPGMGPRSARRAALHLLKKPEQLLAPMARAMADAAQKVSAC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGN DT +PCA+C RD +V+ V+ DV DLWA+ERS YHVLGG LS LD I Sbjct: 61 DVCGNFDTLNPCAVCQATGRDEAVLCVLADVGDLWAMERSGVFRGRYHVLGGCLSALDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I SLI R +++E+I A++AT++GQTTAHY+ D+L+ V ++RLA+G+P+G Sbjct: 121 GPDDLNIASLISRAGQDQVKEVILALNATVDGQTTAHYVADQLENSGVIVSRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL LDDGTI A SR Sbjct: 181 GELGSLDDGTIAAAFSSRR 199 >gi|82702977|ref|YP_412543.1| recombination protein RecR [Nitrosospira multiformis ATCC 25196] gi|123544262|sp|Q2Y7X0|RECR_NITMU RecName: Full=Recombination protein recR gi|82411042|gb|ABB75151.1| recombination protein RecR [Nitrosospira multiformis ATCC 25196] Length = 199 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 117/195 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++ LI L +PG GPRSA+R HL+++ ++ LA+++ V C C N Sbjct: 3 APRSLDELINALRCLPGVGPRSAQRMAYHLLQRDQEGARRLADSLDYALEHVRHCEKCNN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C +C Q+RD +++ VVE ADL +E++ +Y VL G LSPLD IGP +I Sbjct: 63 FTEEVVCELCSSQRRDPALLCVVEMPADLLMMEQAHCYKGMYFVLMGRLSPLDGIGPREI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R ++E+I A + T+EG+ TAHYI + L+ +KITR+A G+P+G EL++ Sbjct: 123 NLDRLLKRARDNMVKEVILATNFTVEGEATAHYIGEMLQNEGLKITRIARGLPVGGELEH 182 Query: 186 LDDGTIFEAIRSRTV 200 +D GT+ +A+ R Sbjct: 183 VDSGTLAQAVLERRE 197 >gi|52425561|ref|YP_088698.1| recombination protein RecR [Mannheimia succiniciproducens MBEL55E] gi|73621497|sp|Q65SE7|RECR_MANSM RecName: Full=Recombination protein recR gi|52307613|gb|AAU38113.1| RecR protein [Mannheimia succiniciproducens MBEL55E] Length = 200 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C C Sbjct: 3 TSPLLENLIESLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLARALTEAMSKIGHCEHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C+IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDICSICDNPRRQNSRLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R++ ++ E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQRRLQQEQFNEVILATNPTVEGDATANYIAELCNQQNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRTI 199 >gi|87122722|ref|ZP_01078597.1| recombination protein RecR [Marinomonas sp. MED121] gi|86162019|gb|EAQ63309.1| recombination protein RecR [Marinomonas sp. MED121] Length = 198 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ L +PG GP+SA++ L+L+++ Q LAE++ +KV CS C Sbjct: 2 VFSPLIAELIESLRCLPGVGPKSAQKMALYLLERDHQGADRLAESLRTALDKVGRCSSCR 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ C IC RD+ I +VE AD+ A+E S N Y VL G LSP+D IGP++ Sbjct: 62 NLTEDLECQICSATDRDSKTICIVETPADVAAMEASGRFNGRYFVLLGHLSPIDGIGPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +E K+ E+I A ++T+EG+ T+HYI + LK D++ITR+A+G+PMG EL+ Sbjct: 122 LGLDRLENIVETNKVEEVIIATNSTLEGEATSHYIAEMLKSSDIEITRIAHGVPMGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A+ R L Sbjct: 182 YVDGNTLALALDGRKKL 198 >gi|251793008|ref|YP_003007734.1| recombination protein RecR [Aggregatibacter aphrophilus NJ8700] gi|247534401|gb|ACS97647.1| recombination protein RecR [Aggregatibacter aphrophilus NJ8700] Length = 200 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENLI+ L +PG GP+SA+R HL++ LA+++ +K+ C C Sbjct: 3 TSPLLENLIESLRVLPGVGPKSAQRMAYHLLQHNRGGGMRLAQSLTEAMSKIGHCEHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C+IC + R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEAVCSICNNPHRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + +E+I A + T+EG TA+YI + VK++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQKVKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 MVDGTTLTHSFLGRREI 199 >gi|313677041|ref|YP_004055037.1| recombination protein recr [Marivirga tractuosa DSM 4126] gi|312943739|gb|ADR22929.1| recombination protein RecR [Marivirga tractuosa DSM 4126] Length = 202 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 2/199 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K IE+ + +++PG G ++A R LHL+K+ E +A+++ ++ + C Sbjct: 1 MEFSSKLIESAVNEFSKLPGIGKKTALRLVLHLLKQDENFTTDIAQSLVDMRQNIKYCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC +RD S+I +VED D+ A+E + N LYHVLGG +SP++ IGP Sbjct: 61 CHNISDEVVCNICKSHKRDNSIICLVEDTRDVLAIENTSQYNGLYHVLGGIISPIEGIGP 120 Query: 123 EDIGIQSLIERIEV--KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 ED+ I SL+ER+ +++E+IF +S T+EG TTA YI K+K +K + +A GIP+G Sbjct: 121 EDLTIDSLMERVSNSDSEVKEIIFGLSPTMEGDTTAFYISKKVKQFGIKTSTIARGIPIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I SRT Sbjct: 181 GELEYADEITLGRSIVSRT 199 >gi|237739922|ref|ZP_04570403.1| recombination protein recR [Fusobacterium sp. 2_1_31] gi|294782990|ref|ZP_06748314.1| recombination protein RecR [Fusobacterium sp. 1_1_41FAA] gi|229423530|gb|EEO38577.1| recombination protein recR [Fusobacterium sp. 2_1_31] gi|294479868|gb|EFG27645.1| recombination protein RecR [Fusobacterium sp. 1_1_41FAA] Length = 197 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + + V CSICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDICNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SLIER+ + I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLIERLGKEDIEEIILATNPNIEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|262066083|ref|ZP_06025695.1| recombination protein RecR [Fusobacterium periodonticum ATCC 33693] gi|291380177|gb|EFE87695.1| recombination protein RecR [Fusobacterium periodonticum ATCC 33693] Length = 197 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + + V CS+CG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SLIER+ + I E+I A + +EG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLIERLGKEDIEEIILATNPNLEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|46203406|ref|ZP_00051579.2| COG0353: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 201 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 114/199 (57%), Positives = 150/199 (75%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++L R+PG GPRSARRA L L+KK+E LL PLA+AM ++ +C Sbjct: 1 MPQAVAGPEIERLIQLLGRMPGLGPRSARRAALQLIKKRETLLAPLADAMRIAAERIVVC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNVDT+DPC IC D+ RD + ++VVEDV+DLWALERS AV A YHVLGG LS LD + Sbjct: 61 RSCGNVDTSDPCTICRDESRDPTTLVVVEDVSDLWALERSGAVKARYHVLGGVLSALDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE + I L+ER ++E+I A++AT++GQTTAHYI + +K + + ITRLA+G+P+G Sbjct: 121 RPEHLTIARLVERAGEPGVKEIILALNATVDGQTTAHYITESIKHLGLTITRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIRSRT Sbjct: 181 GELDYLDEGTLTAAIRSRT 199 >gi|83594800|ref|YP_428552.1| RecR protein [Rhodospirillum rubrum ATCC 11170] gi|123525548|sp|Q2RNN0|RECR_RHORT RecName: Full=Recombination protein recR gi|83577714|gb|ABC24265.1| RecR protein [Rhodospirillum rubrum ATCC 11170] Length = 197 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 101/196 (51%), Positives = 138/196 (70%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ EI+ LI +LAR+PG GPRSARRA LHL+K++E L+ PL EA+ + V LC +CG Sbjct: 1 MSAGEIDRLIGLLARLPGLGPRSARRAALHLLKRRESLMDPLMEALGAVAASVRLCPVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 +DT PC+IC D +RD ++I VV DVADLWALER + YHVLGG LS +D +GPED Sbjct: 61 TLDTRAPCSICADPRRDGTLICVVRDVADLWALERGGVFSGRYHVLGGLLSAIDGVGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L R+ + E+I A+ AT+EGQTTAH I D ++ + ++ LA G+P+G ELD Sbjct: 121 LGLDRLAARVAEGPVVEVILALPATVEGQTTAHVIADLIEPKGITVSGLAQGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLDDGT+ A+R+R Sbjct: 181 YLDDGTLTAALRARRP 196 >gi|302390829|ref|YP_003826649.1| DNA replication and repair protein RecR [Acetohalobium arabaticum DSM 5501] gi|302202906|gb|ADL11584.1| DNA replication and repair protein RecR [Acetohalobium arabaticum DSM 5501] Length = 201 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 124/200 (62%), Gaps = 2/200 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K K I LI L ++PG GP+SA+R +++ ++ + L +A+ ++ +++ C + Sbjct: 1 MKYYAKPIAKLIGKLTKLPGIGPKSAQRLAFYIMNDSDEEVEELVDAIKDVKDRIDYCEV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC + +R+ SVI +VE D+ A+E++ N LYHVL GS+SP++ +GP Sbjct: 61 CNNLTEHERCNICSNDERNRSVICIVESPKDIIAMEKTGEYNGLYHVLHGSISPMEGVGP 120 Query: 123 EDIGIQSLIER--IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 +DI I+ L+ R E +++ E+I A +EG+ TA YI LK + + +R+A+G+P+G Sbjct: 121 DDIEIKGLLSRIEDEDEEVEEVILATDPNVEGEATAMYIARLLKPLGITASRIAHGLPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 +L+Y D+ T+ +A+ R Sbjct: 181 GDLEYADEVTLSKALEGRKQ 200 >gi|315639688|ref|ZP_07894828.1| recombination protein R [Enterococcus italicus DSM 15952] gi|315484649|gb|EFU75105.1| recombination protein R [Enterococcus italicus DSM 15952] Length = 198 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 126/196 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI +PG G ++A R H + K++++ A+++ ++ + CSICGN Sbjct: 3 YPEPIARLIASYMNLPGIGQKTATRLAFHTIDMKDEVVNEFAKSLLSVKRDLQFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE+ D+ A+E+ + + LYHVL G LSP++ GP+DI Sbjct: 63 ITEEDPCEICADKTRDRSTILVVEEPKDVMAMEKMREYHGLYHVLHGVLSPMEGTGPDDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +LI+R+ ++++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIAALIQRLHNEEVKEVILATNATTEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEVTLLKAVEGRREL 198 >gi|288926771|ref|ZP_06420681.1| recombination protein RecR [Prevotella buccae D17] gi|288336452|gb|EFC74828.1| recombination protein RecR [Prevotella buccae D17] Length = 203 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 127/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K+ +E + A++PG G ++A R LH +++ ++ + A A+ + ++V C Sbjct: 1 MEKQYPSALLEKAVGEFAKLPGIGRKTALRLVLHTLRRNDEEVERFAAAITTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC D++RD + + VVE+V D+ A+E ++ + +YHVLGG +SP+D I Sbjct: 61 RVCHNISDTDICPICADERRDRTTVCVVENVQDVMAIENTQQFHGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I SL R+E + E+I A+S+T+EG TT YI +L+ VKIT +A GI +G Sbjct: 121 GPGDIEIDSLCRRVEEGGVEEVILALSSTMEGDTTNFYISRRLQAAGVKITAIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 +EL+Y D+ T+ +I +R Sbjct: 181 NELEYTDEVTLGRSIVNRVP 200 >gi|257062980|ref|YP_003142652.1| DNA replication and repair protein RecR [Slackia heliotrinireducens DSM 20476] gi|256790633|gb|ACV21303.1| DNA replication and repair protein RecR [Slackia heliotrinireducens DSM 20476] Length = 198 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 119/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I+ L+ L R+PG GP+SA+R L+ + LA+A+ + + V CS C N Sbjct: 3 SAPAIQRLLDELERMPGVGPKSAQRIAYWLLNADRETAMRLADAIIEVKDTVHFCSRCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + RD + VV + D+ A+ER+ A LYHVLGG+LSP++ IGP+D+ Sbjct: 63 YAEGDTCEICASKSRDERTLCVVSEPRDISAIERTSAYRGLYHVLGGALSPMEGIGPDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R+ + I E++ A + +EG+TTA Y+ +K + ++++RLA G+P+G +L++ Sbjct: 123 KITELMARLATEDIAEVVLATNPNVEGETTATYLARIIKPLGIQVSRLASGLPVGGDLEF 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ AI +R L Sbjct: 183 ADEVTLGRAIEARRTL 198 >gi|154508070|ref|ZP_02043712.1| hypothetical protein ACTODO_00561 [Actinomyces odontolyticus ATCC 17982] gi|293191861|ref|ZP_06609322.1| recombination protein RecR [Actinomyces odontolyticus F0309] gi|153797704|gb|EDN80124.1| hypothetical protein ACTODO_00561 [Actinomyces odontolyticus ATCC 17982] gi|292820444|gb|EFF79429.1| recombination protein RecR [Actinomyces odontolyticus F0309] Length = 197 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 117/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +LI ++PG GP+SA+R +H++ + + + L +A+ + +V C ICG Sbjct: 1 MYDGALADLIDQFGQLPGIGPKSAQRMAMHVLDAEPEDVARLVDAINAVRGRVRHCDICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C+IC D +RD SVI VV++ D+ A+E ++ YHVLGG + P+ +GP+ Sbjct: 61 NLTEEDECSICRDVRRDPSVICVVQEPKDIQAIEGARVFRGRYHVLGGVIDPIHGVGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL+ R+ + E+I A + +EG+ TA Y+ L + V+ +RLA G+PMG +L+ Sbjct: 121 LNIASLMSRLADGTVVEVILATNPNVEGEATAAYLARMLSTMGVETSRLAMGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+ A+ R L Sbjct: 181 YADSVTLGRALEGRRRL 197 >gi|310778209|ref|YP_003966542.1| recombination protein RecR [Ilyobacter polytropus DSM 2926] gi|309747532|gb|ADO82194.1| recombination protein RecR [Ilyobacter polytropus DSM 2926] Length = 197 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H+++ + + AEA+ N+ + V C ICG Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSATRLAFHVLEMDDMEVNIFAEAIKNVKSSVKKCVICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N + C +C D+ R +I VVED D+ + E++K YHVL G + PL+ + P+ Sbjct: 61 NFGEEETCDVCRDEYRTNEIICVVEDTRDIVSFEKAKKYRGRYHVLNGKIDPLNGMTPDK 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ER+ + ++E+I A++ +EG+TTA Y+ + LK +K+T++A GIPMG ++ Sbjct: 121 LNIKSLVERVAAEDVKEVILAMNPDLEGETTAMYLTNLLKPFGIKVTKIASGIPMGGNIE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI +A+ R L Sbjct: 181 FSDIATISKALEGRREL 197 >gi|114704407|ref|ZP_01437315.1| recombination protein RecR [Fulvimarina pelagi HTCC2506] gi|114539192|gb|EAU42312.1| recombination protein RecR [Fulvimarina pelagi HTCC2506] Length = 201 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 128/201 (63%), Positives = 166/201 (82%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I G EIE LI++LA++PG GPRSARRA LHLVKK+E +L PL AMA+ KV C Sbjct: 1 MAKSIAGPEIERLIQLLAKLPGLGPRSARRAALHLVKKREPILRPLTAAMADALEKVGEC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGN+DT+DPC IC D RD SV++VVEDV+DLWALER+KA+NA YHVLGG LSPL+ I Sbjct: 61 SVCGNIDTSDPCTICRDPARDQSVVVVVEDVSDLWALERAKALNAAYHVLGGVLSPLEGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I+ L+ER+ +++EL+ A++AT+EGQTTAHY+MD+L+G+DV+ TRLA+G+P+G Sbjct: 121 GPEDLTIRQLVERVSKGEVKELVIAVNATVEGQTTAHYLMDQLEGLDVRATRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ A+RSRT L Sbjct: 181 GELDYLDEGTLSAAMRSRTAL 201 >gi|194333714|ref|YP_002015574.1| recombination protein RecR [Prosthecochloris aestuarii DSM 271] gi|229470336|sp|B4S790|RECR_PROA2 RecName: Full=Recombination protein recR gi|194311532|gb|ACF45927.1| recombination protein RecR [Prosthecochloris aestuarii DSM 271] Length = 204 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 129/204 (63%), Gaps = 5/204 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T IE+LI+ A++PG G ++A+R +H++ + + A A+ ++ KV C + Sbjct: 1 MRYTSAAIESLIEEFAKLPGIGRKTAQRLAMHILHQHTDEVEKFASALIDVKQKVIHCRV 60 Query: 63 CGNVDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV DPCAIC + RD SVI VVE +D+ A E++ LYHVL G +SPLD I Sbjct: 61 CQNVTDIGADPCAICCAKGRDRSVICVVETPSDVLAFEKTGQYRGLYHVLHGVISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DIG++ L+ R+ + ELI A++ T+EG+TT YI LK + V++T++A GI Sbjct: 121 GPDDIGVKELLSRLSPDDGPRVSELIMALNPTVEGETTVLYISKLLKPLGVQVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G+EL+++D+ T+ A+ R+ L Sbjct: 181 PVGAELEFVDEATLSRALEGRSAL 204 >gi|260435450|ref|ZP_05789420.1| recombination protein RecR [Synechococcus sp. WH 8109] gi|260413324|gb|EEX06620.1| recombination protein RecR [Synechococcus sp. WH 8109] Length = 219 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 117/195 (60%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C + Sbjct: 25 FTKPLARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFH 84 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC + +R VI VV D DL ALER++ YHVLGG +SP+D IGPE + Sbjct: 85 LSADPECEICRNPERRNGVICVVADSRDLLALERTREFQGRYHVLGGLISPMDGIGPELL 144 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y Sbjct: 145 HVTELVQRITNEEISEVILALTPSVEGDTTSLYLGRLLKPFC-SVSRIAYGLPMGSELEY 203 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 204 ADEVTLSRALEGRRP 218 >gi|257468026|ref|ZP_05632122.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185] gi|317062312|ref|ZP_07926797.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185] gi|313687988|gb|EFS24823.1| recombination protein recR [Fusobacterium ulcerans ATCC 49185] Length = 197 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H+++ E+ + +EAM + + C +CG Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSATRLAFHILEMSEEQVEKFSEAMKEVKKTIKKCPVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C IC D+ RD ++ VVED D+ + E++ N YHVL G ++PL+ + P+ Sbjct: 61 DFCENDLCNICADETRDKEIVCVVEDSRDIISFEKTGKYNGTYHVLNGKIAPLNGMTPDK 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ER+ I E+I A++ +EG+TT+ Y+ LK VKIT++A GIP+G ++ Sbjct: 121 LNIKSLLERVAATDINEVILALNPDLEGETTSLYLTKLLKPFGVKITKIASGIPIGGNIE 180 Query: 185 YLDDGTIFEAIRSRTV 200 + D TI +A+ R Sbjct: 181 FADTATISKALDGRHE 196 >gi|294085058|ref|YP_003551818.1| recombination protein RecR [Candidatus Puniceispirillum marinum IMCC1322] gi|292664633|gb|ADE39734.1| recombination protein RecR [Candidatus Puniceispirillum marinum IMCC1322] Length = 197 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 101/193 (52%), Positives = 140/193 (72%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +ENLI+ L R+PG GPRSARRA L L+K +++L+ PLA+ + +I V C CGN+DT Sbjct: 4 SLENLIRRLGRLPGLGPRSARRAVLFLLKNRDRLMLPLAQELHDIARTVRPCVDCGNLDT 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC D +RD S I VVEDV DLWA+ER+ YHVLGG+LS LD GP+D+ I Sbjct: 64 ADLCHICRDDRRDKSRICVVEDVGDLWAMERAAVFRGRYHVLGGTLSALDGRGPDDLAID 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R + ++ E+I A+SAT++GQTTAHYI +KL ++ +TRLA+G+P+G ELDYLDD Sbjct: 124 RLLRRAQAGEVVEIILALSATVDGQTTAHYIAEKLAPSNLDVTRLAHGVPVGGELDYLDD 183 Query: 189 GTIFEAIRSRTVL 201 GT+ +A+++R + Sbjct: 184 GTLAQALKARAKM 196 >gi|296876859|ref|ZP_06900907.1| recombination protein R [Streptococcus parasanguinis ATCC 15912] gi|312867073|ref|ZP_07727283.1| recombination protein RecR [Streptococcus parasanguinis F0405] gi|296432361|gb|EFH18160.1| recombination protein R [Streptococcus parasanguinis ATCC 15912] gi|311097202|gb|EFQ55436.1| recombination protein RecR [Streptococcus parasanguinis F0405] Length = 198 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + N ++ CSICG Sbjct: 2 LYPAPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLNAKRELGYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D+ RD S+I+VVED D+ A+E + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDEETCEICRDETRDPSLILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLISRLMDGTVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|253583496|ref|ZP_04860694.1| recombination protein recR [Fusobacterium varium ATCC 27725] gi|251834068|gb|EES62631.1| recombination protein recR [Fusobacterium varium ATCC 27725] Length = 197 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H+++ E+ + +EAM + + C +CG Sbjct: 1 MATKSLERLIDEFNKLPGIGRKSATRLAFHILEMSEEQVEKFSEAMKEVKKTIKKCPVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C IC D+ RD ++ VVED D+ + E++ N YHVL G ++PL+ + P+ Sbjct: 61 DFCENDLCNICADETRDKEIVCVVEDSRDIISFEKTGKYNGTYHVLNGKIAPLNGMTPDK 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ER+ I E+I A++ +EG+TT+ Y+ LK VKIT++A GIP+G ++ Sbjct: 121 LNIKSLLERVAATDISEVILALNPDLEGETTSLYLTKLLKPFGVKITKIASGIPIGGNIE 180 Query: 185 YLDDGTIFEAIRSRTV 200 + D TI +A+ R Sbjct: 181 FADTATISKALDGRHE 196 >gi|189346405|ref|YP_001942934.1| recombination protein RecR [Chlorobium limicola DSM 245] gi|229890137|sp|B3EIC5|RECR_CHLL2 RecName: Full=Recombination protein recR gi|189340552|gb|ACD89955.1| recombination protein RecR [Chlorobium limicola DSM 245] Length = 205 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 80/203 (39%), Positives = 124/203 (61%), Gaps = 6/203 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T IE LI+ A++PG G ++A+R +H++ + + LA A+ +I KV CS+ Sbjct: 1 MRYTSAAIETLIEEFAKLPGIGRKTAQRLAMHILHEPKSGAERLAGALIDIKEKVIRCSV 60 Query: 63 CGNVDTTD--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV D PC IC RD SVI VVE AD+ A E++ YHVL G +SPLD I Sbjct: 61 CQNVTDRDADPCYICSSTGRDRSVICVVESPADVLAFEKTGHYKGQYHVLHGLVSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 GP+DI I L+ R+ + +E++ A++ T+EG+TT+ YI LK + +T++A G Sbjct: 121 GPDDIRIHELLARLGERHEAVPVKEVVLALNPTVEGETTSLYITRLLKPFGISVTKIARG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRT 199 IP+G+EL+++D+ T+ A+ R+ Sbjct: 181 IPVGAELEFIDEATLSRAMEGRS 203 >gi|299142928|ref|ZP_07036055.1| recombination protein RecR [Prevotella oris C735] gi|298575657|gb|EFI47536.1| recombination protein RecR [Prevotella oris C735] Length = 203 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 128/200 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K +E + A++PG G +SA R L++++++ + + +A+ + + V C Sbjct: 1 MSDKYPSALLEKAVSEFAKLPGIGRKSALRLVLYMLRRENEEVDAFGKAITTLKHDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC D +RD + I VVE++ D+ A+E+++ N LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTDVCPICSDIRRDDTTICVVENIQDVMAVEKTQQYNGLYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I+SL+ER++ K++E+I A+S+T+EG TT YI KL V ++ +A GI +G Sbjct: 121 GPNDIEIESLVERVKGGKVKEVILALSSTMEGDTTNFYISRKLAAYGVDVSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIINRTP 200 >gi|332686116|ref|YP_004455890.1| recombination protein RecR [Melissococcus plutonius ATCC 35311] gi|332370125|dbj|BAK21081.1| recombination protein RecR [Melissococcus plutonius ATCC 35311] Length = 198 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ ++PG G ++A R + + E+ + A+++ ++ + CS CG Sbjct: 2 YYPQPIAKLIESYMKLPGIGQKTAIRLAFYTIDMDEEDVTNFAKSLISVKRDLHFCSNCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC D+ RD S I+V+E+ D+ A+E+ + + LYHVL G LSP++ GPED Sbjct: 62 NITEEDLCDICQDKTRDHSTILVIEEPKDITAMEKMREYHGLYHVLNGVLSPMEGTGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I SLI+R+ +I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 122 INIASLIQRLHNDEIKEVILATNATTEGEATAMYLSRFIKPAGIKVTRLAHGLSVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +AI R L Sbjct: 182 YADEITLLKAIEGRREL 198 >gi|306833024|ref|ZP_07466156.1| recombination protein R [Streptococcus bovis ATCC 700338] gi|304424923|gb|EFM28057.1| recombination protein R [Streptococcus bovis ATCC 700338] Length = 198 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC DQ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCNICTDQTRDHSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|260590614|ref|ZP_05856072.1| recombination protein RecR [Prevotella veroralis F0319] gi|260537439|gb|EEX20056.1| recombination protein RecR [Prevotella veroralis F0319] Length = 202 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 135/199 (67%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + + +E ++ +++PG G ++A R LHL+++ + + +A+ ++ + + C Sbjct: 1 MQQYSSQLLERAVEGFSQLPGVGRKTALRLVLHLLRQPVEEVESFTDAVTHVCHDIKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ TD C+IC D +RD+SV+ VVE++ D+ A+E ++ + LYHVLGG +SP+D IG Sbjct: 61 VCHNISDTDICSICSDPRRDSSVVCVVENIQDVMAIENTQQFHGLYHVLGGIISPMDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I SL+ER++ +++E+I A+++T+EG TT YI KLK DVK++ +A GI +G Sbjct: 121 PHDLSIDSLVERVDTGEVKEVILALASTMEGDTTNFYISRKLKDKDVKLSIIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSILNRTP 199 >gi|222153386|ref|YP_002562563.1| recombination protein RecR [Streptococcus uberis 0140J] gi|254790787|sp|B9DUS1|RECR_STRU0 RecName: Full=Recombination protein recR gi|222114199|emb|CAR42745.1| recombination protein RecR [Streptococcus uberis 0140J] Length = 198 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC D RD S+I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCSICTDPSRDKSMILVVEDSKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKTLITRLMDSDVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|256846789|ref|ZP_05552244.1| recombination protein RecR [Fusobacterium sp. 3_1_36A2] gi|256717755|gb|EEU31313.1| recombination protein RecR [Fusobacterium sp. 3_1_36A2] Length = 197 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 116/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C+IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCSICSDNARNHNIICVVEESRDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|90416004|ref|ZP_01223937.1| recombination protein RecR [marine gamma proteobacterium HTCC2207] gi|90332378|gb|EAS47575.1| recombination protein RecR [marine gamma proteobacterium HTCC2207] Length = 197 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 86/197 (43%), Positives = 129/197 (65%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G I+ LI L +PG G +SA+R LHL+++ LAE++ KV C+ C Sbjct: 1 MYGNVIDQLIDALRVLPGVGNKSAQRMALHLLERDRSGATRLAESLVEAVEKVGRCAQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + CAIC +++R A I VVE+ ADL+A+E++ + Y VL G LSP+D IGPE Sbjct: 61 SLTEHEVCAICRNERRLADQICVVENPADLYAIEQAGSFRGKYFVLLGHLSPIDGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI L+ER++ I ELI A + T+EG+ TAH+I DK K + V+++R+AYG+PMG EL+ Sbjct: 121 LGIDQLVERLKNGYISELILATNLTVEGEATAHFIADKAKALGVEVSRIAYGVPMGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D GT+ A++SR L Sbjct: 181 YVDGGTLNMALQSRKSL 197 >gi|307719901|ref|YP_003875433.1| recombination protein RecR [Spirochaeta thermophila DSM 6192] gi|306533626|gb|ADN03160.1| recombination protein RecR [Spirochaeta thermophila DSM 6192] Length = 202 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 112/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E LI L+R+PG G +SA R L+K + L + + ++V CS CG Sbjct: 3 SLEVLIGHLSRLPGVGKKSASRIAHWLLKADRAFVQALGRLIMELPDRVKRCSRCGMYSD 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C IC D RD I VVE +D+WA+E + LYHVL G+++PL+ + PED+ I Sbjct: 63 ATLCEICSDPARDHGTICVVEQPSDVWAIEATHTYRGLYHVLHGAIAPLEGVRPEDLTID 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L+ R+E + + E+I A + T+EG TTA Y++ LK K++RLA G+P+G +L+Y D Sbjct: 123 ALVRRLEREPVEEVIIATNPTVEGDTTALYLVRLLKDWGGKVSRLALGLPVGGDLEYADR 182 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R + Sbjct: 183 VTLARALEGRQRI 195 >gi|291545136|emb|CBL18245.1| recombination protein RecR [Ruminococcus sp. 18P13] Length = 200 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 121/189 (64%) Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72 L + A++PG G ++A+R +++ E + A+A+ ++V C+IC N+ + C Sbjct: 12 LAEQFAKLPGIGMKTAQRLAYYVMSMSESDVQAFADAILQAKHRVHNCAICQNLTEQEVC 71 Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC D +RD S+I VVE D+ A ER+ N YHVL G +SPLD + P+D+ I+SL+ Sbjct: 72 PICGDDRRDHSIICVVESPKDVTAFERTGEYNGTYHVLHGLISPLDGVSPDDLEIRSLLA 131 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R++ + + E+I A + T+EG+ TA YI LK + VK++RLA+G+P+G L+Y D+ T++ Sbjct: 132 RLQSEPVTEVIMATNPTVEGEATAMYIARLLKPMGVKVSRLAFGLPIGGILEYADEVTLY 191 Query: 193 EAIRSRTVL 201 +A+ +R + Sbjct: 192 KALENRNEI 200 >gi|15672322|ref|NP_266496.1| RecM [Lactococcus lactis subsp. lactis Il1403] gi|281490887|ref|YP_003352867.1| recombination protein Recr [Lactococcus lactis subsp. lactis KF147] gi|20139706|sp|Q9CIL6|RECR_LACLA RecName: Full=Recombination protein recR gi|12723208|gb|AAK04438.1|AE006271_1 RecM protein [Lactococcus lactis subsp. lactis Il1403] gi|281374645|gb|ADA64165.1| Recombination protein recR [Lactococcus lactis subsp. lactis KF147] gi|326405919|gb|ADZ62990.1| recombination protein RecR [Lactococcus lactis subsp. lactis CV56] Length = 198 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + ++Q + A+ + + + CSICG Sbjct: 2 YYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ +DPCAIC D RD + I+VVE+ D+ A+E+ + LYHVL G++SP++ I P++ Sbjct: 62 NLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDE 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++LI R+ +++E+I A +AT +G+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 122 INVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ +R + Sbjct: 182 YADEITLSKAVENRLEI 198 >gi|325977795|ref|YP_004287511.1| recombination protein recR [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177723|emb|CBZ47767.1| Recombination protein recR [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 198 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|312200645|ref|YP_004020706.1| recombination protein RecR [Frankia sp. EuI1c] gi|311231981|gb|ADP84836.1| recombination protein RecR [Frankia sp. EuI1c] Length = 199 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 116/195 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L +PG GP+SA+R H++ + LA+A+ + KV C IC Sbjct: 1 MYEGVVQDLIDELGALPGIGPKSAQRIAFHILAADPADVRRLAKALLEVKEKVQFCRICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D Sbjct: 61 NVAQAELCRICADPRRDTTVICVVEESKDVVAVERTREFRGRYHVLGGAINPIGGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ LI R+ + ELI A EG+ TA Y+ ++ + + ++RLA G+PMG +L+ Sbjct: 121 LHIRELIARLADGTVTELILATDPNTEGEVTASYLARQIGPMGLTVSRLASGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 + D+ T+ A R Sbjct: 181 WADEVTLGRAFEGRR 195 >gi|317502630|ref|ZP_07960750.1| recombination protein R [Prevotella salivae DSM 15606] gi|315666249|gb|EFV05796.1| recombination protein R [Prevotella salivae DSM 15606] Length = 203 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 131/200 (65%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K +E + +++PG G +SA R L++++++ + + +EA+ + ++V C Sbjct: 1 MSDKYPSSLLEKAVSEFSKLPGIGRKSALRLVLYMLRRENEEVDAFSEAITTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC D +RDA+ I VVE++ D+ A+E+++ N LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTEVCPICSDVRRDATTICVVENIQDVMAIEKTQQYNGLYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I SL+ER++ KI+E+I A+S+T+EG TT +I KL DV I+ +A GI +G Sbjct: 121 GPNDIEISSLVERVKTGKIKEVILALSSTMEGDTTNFFISRKLADFDVAISVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIINRTP 200 >gi|258650921|ref|YP_003200077.1| recombination protein RecR [Nakamurella multipartita DSM 44233] gi|258554146|gb|ACV77088.1| recombination protein RecR [Nakamurella multipartita DSM 44233] Length = 202 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +++LI L R+PG GP+SA+R HL+ + L A+ + ++V C++ Sbjct: 1 MAVYEGPVQDLIDELGRLPGIGPKSAQRIAFHLLTADPVDITRLQSALQRVKDEVRFCTV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGNV + C IC D R+ +VI VVE+ D+ A+ER++ YHVLGG++SP+D IGP Sbjct: 61 CGNVAADEKCRICADPAREDAVICVVEEPKDVAAVERTREFRGKYHVLGGAISPIDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGS 181 + + I L+ RI +RE+I A +EG+ TA Y+ L+ + +TRLA G+P+G Sbjct: 121 DQLRIAPLLTRIAAPGVREVILATDPNLEGEATATYLTRLLQPFPGLTVTRLASGLPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 +L+Y D+ T+ A R Sbjct: 181 DLEYADEVTLGRAFAGRRS 199 >gi|329964827|ref|ZP_08301835.1| recombination protein RecR [Bacteroides fluxus YIT 12057] gi|328524468|gb|EGF51536.1| recombination protein RecR [Bacteroides fluxus YIT 12057] Length = 205 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 127/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQYPSILLEKAVSEFAKLPGIGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD+SV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLQIESLVQRVSSGDIKEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEITLGRSIVNRTP 200 >gi|209965589|ref|YP_002298504.1| recombination protein RecR, putative [Rhodospirillum centenum SW] gi|209959055|gb|ACI99691.1| recombination protein RecR, putative [Rhodospirillum centenum SW] Length = 201 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 107/201 (53%), Positives = 151/201 (75%), Gaps = 4/201 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EI+ LI++LA++PG GPRSARRA LHL+KK++ L+ PLAEAMA + CS+CG Sbjct: 1 MIGPEIDRLIQLLAKLPGLGPRSARRAALHLIKKRDSLMEPLAEAMAAAAAGIRTCSVCG 60 Query: 65 NVDTTDPCAICIDQQRD----ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 N+DT DPC +C D +R + + VVE+V DLWALER+ A LYHVLGG+LS L+ + Sbjct: 61 NLDTGDPCHVCRDGERPGGRDRTTLCVVEEVGDLWALERTGAYRGLYHVLGGTLSALEGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ + L+ER ++ E+I A++AT+ GQTTAHY+ D+L+G +V+I+RLA+G+P+G Sbjct: 121 GPDDLNVPKLLERASRPEVTEVILALNATVGGQTTAHYLADRLEGCEVRISRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGT+ A+R+R L Sbjct: 181 GELDYLDDGTLTAALRARRSL 201 >gi|195977777|ref|YP_002123021.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868924|ref|YP_002744872.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus] gi|238689805|sp|B4U1Z1|RECR_STREM RecName: Full=Recombination protein recR gi|259563706|sp|C0MCW0|RECR_STRS7 RecName: Full=Recombination protein recR gi|195974482|gb|ACG62008.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225702200|emb|CAW99924.1| recombination protein RecR [Streptococcus equi subsp. zooepidemicus] Length = 198 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + ++ + A+ + ++ CSICG Sbjct: 2 LYPIPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD I+VVE D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCHICTDSSRDKETILVVEASKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ + E+I A +AT +G+ TA YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMAGEATEVIVATNATADGEATAMYISRILKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|171463392|ref|YP_001797505.1| recombination protein RecR [Polynucleobacter necessarius subsp. necessarius STIR1] gi|229470334|sp|B1XU64|RECR_POLNS RecName: Full=Recombination protein recR gi|171192930|gb|ACB43891.1| recombination protein RecR [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 204 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + + LI+ L +PG GP+SA+R +L++ LA+++ V Sbjct: 1 MARIEAPQDALGRLIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVETVGH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C T C+ C D++RD S++ +VE AD +E++ + Y VL G LSPLD Sbjct: 61 CACCNTFSETQVCSTCSDERRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175 +GP +I L+ RIE RE++ A + T EG+ TAHYI + LK +K+TR+A Sbjct: 121 MGPNEISFDRLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRIAR 180 Query: 176 GIPMGSELDYLDDGTIFEAIRSRT 199 GIP+G EL+Y+D GT+ A+ R Sbjct: 181 GIPVGGELEYVDAGTLARALMDRR 204 >gi|300790713|ref|YP_003771004.1| recombination protein RecR [Amycolatopsis mediterranei U32] gi|299800227|gb|ADJ50602.1| recombination protein RecR [Amycolatopsis mediterranei U32] Length = 198 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 76/198 (38%), Positives = 118/198 (59%), Gaps = 1/198 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + L + + + V C +CG Sbjct: 1 MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLATDPADIARLQDVLGKVKEGVQFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D++RD +VI VVE+ D+ A+ER++ YHVLGG+L PL IGPE Sbjct: 61 NVSEQQKCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183 + ++ L++RI I+E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L Sbjct: 121 LRMRELLKRIGEADIKEIIIATDPNTEGEATATYLVRMLRNFPGLSVTRLASGLPMGGDL 180 Query: 184 DYLDDGTIFEAIRSRTVL 201 ++ D+ T+ A+ R VL Sbjct: 181 EFADELTLGRALSGRRVL 198 >gi|33865462|ref|NP_897021.1| recombination protein RecR [Synechococcus sp. WH 8102] gi|73621524|sp|Q7U7Q3|RECR_SYNPX RecName: Full=Recombination protein recR gi|33632631|emb|CAE07443.1| RecR protein [Synechococcus sp. WH 8102] Length = 192 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 1/190 (0%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 LI R+PG GPR+A+R LHL+ + E+ + A+A+ +V C C ++ Sbjct: 3 RLIDQFERLPGIGPRTAQRLALHLLNQPEEQIRQFADALLAARTQVGQCQTCFHLSADPE 62 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC + +R +I VV D DL ALER++ YHVLGG +SP+D IGPE + + L+ Sbjct: 63 CEICRNPERRNGLICVVADSRDLLALERTREFQGRYHVLGGLISPMDGIGPELLHVTPLV 122 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 RI + I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D+ T+ Sbjct: 123 ARINQEDITEVILALTPSVEGDTTSLYLARLLKPFC-PVSRIAYGLPMGSELEYADEVTL 181 Query: 192 FEAIRSRTVL 201 A+ R L Sbjct: 182 SRALEGRRPL 191 >gi|315608945|ref|ZP_07883917.1| recombination protein R [Prevotella buccae ATCC 33574] gi|315249325|gb|EFU29342.1| recombination protein R [Prevotella buccae ATCC 33574] Length = 203 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 127/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K+ +E + A++PG G ++A R LH +++ ++ + A A+ + ++V C Sbjct: 1 MEKQYPSALLEKAVGEFAKLPGIGRKTALRLVLHTLRRNDEEVERFAAAITTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC D++RD + + VVE+V D+ A+E ++ + +YHVLGG +SP+D I Sbjct: 61 RLCHNISDTDICPICADERRDRTTVCVVENVQDVMAIENTQQFHGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I SL R+E + E+I A+S+T+EG TT YI +L+ VKIT +A GI +G Sbjct: 121 GPGDIEIDSLCRRVEEGGVEEVILALSSTMEGDTTNFYISRRLQAAGVKITAIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 +EL+Y D+ T+ +I +R Sbjct: 181 NELEYTDEVTLGRSIVNRVP 200 >gi|292493701|ref|YP_003529140.1| recombination protein RecR [Nitrosococcus halophilus Nc4] gi|291582296|gb|ADE16753.1| recombination protein RecR [Nitrosococcus halophilus Nc4] Length = 199 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + G + L++ L +PG GP+SA+R HL++ + LA+A+ K+ C Sbjct: 1 MNLFGPSLGRLVEALRCLPGVGPKSAQRMAFHLLESDREGGQRLAQALLEALGKITHCQA 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + TD C +C D QRD S + VVE +D+ A+E++ A +Y VL G LSPLD IGP Sbjct: 61 CRILSETDLCPLCADPQRDHSQLCVVEMPSDVQAIEQATAYPGVYFVLMGHLSPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E +G+ L +R++ +IRELI A + T+EG+ TAHY+ + + + ++R+A+G+P+G E Sbjct: 121 EALGMDLLAKRLDTDQIRELILATNLTVEGEATAHYLSELARSRGITVSRIAHGVPLGGE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+++D GT+ A + R L Sbjct: 181 LEFVDRGTLSHAFQGRHHL 199 >gi|193214870|ref|YP_001996069.1| recombination protein RecR [Chloroherpeton thalassium ATCC 35110] gi|229890141|sp|B3QYJ4|RECR_CHLT3 RecName: Full=Recombination protein recR gi|193088347|gb|ACF13622.1| recombination protein RecR [Chloroherpeton thalassium ATCC 35110] Length = 205 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 131/205 (63%), Gaps = 6/205 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T +E LI A++PG G ++A+R T+ ++ ++++ + LA+A+ ++ NKV CS+ Sbjct: 1 MRYTSHAVETLIDEFAKLPGIGRKTAQRLTMFILHEEKEKVESLAQALLDLKNKVSYCSL 60 Query: 63 CGNV--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV DPC IC +RD V+ VVE D+ A E++ N LYHVL G +SPLD + Sbjct: 61 CQNVTDKEIDPCNICTSVKRDKRVVCVVEAPNDVLAFEKTNQYNGLYHVLHGVISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 GP+D+ ++ LI R+ +E+I AI+ T+EG+TT Y+ LK + VK+TR+A G Sbjct: 121 GPDDLKVKELIHRLSETDPETSIKEVILAINPTVEGETTVLYLSKLLKPLGVKVTRIARG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 IP+G+EL+Y+DD T+ A+ R+ L Sbjct: 181 IPIGTELEYIDDATLTRALEGRSEL 205 >gi|169825653|ref|YP_001695811.1| recombination protein RecR [Lysinibacillus sphaericus C3-41] gi|168990141|gb|ACA37681.1| Recombination protein RecR [Lysinibacillus sphaericus C3-41] Length = 184 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 75/183 (40%), Positives = 123/183 (67%) Query: 19 RIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQ 78 ++PG GP++A R ++ KE+ + ++A+ + + CS+CGN+ DPC IC D+ Sbjct: 2 KLPGIGPKTAARLAFFVLSMKEEDVLSFSKALIDAKRNLSYCSVCGNITDVDPCHICTDK 61 Query: 79 QRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK 138 QRD S+I VV+D D+ A+E+ + N +YHVL G++SP+D IGPEDI + SL+ R+ + Sbjct: 62 QRDHSIICVVQDTKDVIAMEKMRDYNGMYHVLQGAISPMDGIGPEDINVASLLVRLHDES 121 Query: 139 IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 ++ELI A ++TIEG+ TA YI +K ++ TR+A+G+P+G +L+Y D+ T+ +A+ R Sbjct: 122 VQELILATNSTIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDLEYADEVTLSKAMEGR 181 Query: 199 TVL 201 L Sbjct: 182 REL 184 >gi|34762299|ref|ZP_00143303.1| Recombination protein recR [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|256027402|ref|ZP_05441236.1| recombination protein recR [Fusobacterium sp. D11] gi|260497949|ref|ZP_05816066.1| recombination protein RecR [Fusobacterium sp. 3_1_33] gi|289765366|ref|ZP_06524744.1| recombination protein recR [Fusobacterium sp. D11] gi|27888021|gb|EAA25084.1| Recombination protein recR [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|260196510|gb|EEW94040.1| recombination protein RecR [Fusobacterium sp. 3_1_33] gi|289716921|gb|EFD80933.1| recombination protein recR [Fusobacterium sp. D11] Length = 197 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 115/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCSICSDNTRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|15675339|ref|NP_269513.1| recombination protein RecR [Streptococcus pyogenes M1 GAS] gi|19746381|ref|NP_607517.1| recombination protein RecR [Streptococcus pyogenes MGAS8232] gi|21910621|ref|NP_664889.1| recombination protein RecR [Streptococcus pyogenes MGAS315] gi|71903815|ref|YP_280618.1| recombination protein RecR [Streptococcus pyogenes MGAS6180] gi|71910972|ref|YP_282522.1| recombination protein RecR [Streptococcus pyogenes MGAS5005] gi|94988836|ref|YP_596937.1| recombination protein RecR [Streptococcus pyogenes MGAS9429] gi|94990739|ref|YP_598839.1| recombination protein RecR [Streptococcus pyogenes MGAS10270] gi|94992727|ref|YP_600826.1| recombination protein RecR [Streptococcus pyogenes MGAS2096] gi|161761308|ref|YP_060504.2| recombination protein RecR [Streptococcus pyogenes MGAS10394] gi|209559649|ref|YP_002286121.1| recombination protein RecR [Streptococcus pyogenes NZ131] gi|306827068|ref|ZP_07460366.1| recombination protein R [Streptococcus pyogenes ATCC 10782] gi|54039041|sp|P65995|RECR_STRP3 RecName: Full=Recombination protein recR gi|54039042|sp|P65996|RECR_STRP8 RecName: Full=Recombination protein recR gi|54041800|sp|P65994|RECR_STRP1 RecName: Full=Recombination protein recR gi|68053075|sp|Q5XB92|RECR_STRP6 RecName: Full=Recombination protein recR gi|123639623|sp|Q48SP7|RECR_STRPM RecName: Full=Recombination protein recR gi|166223504|sp|Q1JAX6|RECR_STRPB RecName: Full=Recombination protein recR gi|166223505|sp|Q1JL26|RECR_STRPC RecName: Full=Recombination protein recR gi|166223506|sp|Q1JG49|RECR_STRPD RecName: Full=Recombination protein recR gi|172046750|sp|Q1J5W6|RECR_STRPF RecName: Full=Recombination protein recR gi|226726312|sp|B5XM64|RECR_STRPZ RecName: Full=Recombination protein recR gi|13622521|gb|AAK34234.1| putative recombination protein [Streptococcus pyogenes M1 GAS] gi|19748579|gb|AAL98016.1| putative recombination protein [Streptococcus pyogenes MGAS8232] gi|21904823|gb|AAM79692.1| recombination protein recR [Streptococcus pyogenes MGAS315] gi|71802910|gb|AAX72263.1| recombination protein [Streptococcus pyogenes MGAS6180] gi|71853754|gb|AAZ51777.1| recombination protein [Streptococcus pyogenes MGAS5005] gi|94542344|gb|ABF32393.1| recombination protein [Streptococcus pyogenes MGAS9429] gi|94544247|gb|ABF34295.1| Recombination protein recR [Streptococcus pyogenes MGAS10270] gi|94546235|gb|ABF36282.1| Recombination protein recR [Streptococcus pyogenes MGAS2096] gi|209540850|gb|ACI61426.1| Recombination protein recR [Streptococcus pyogenes NZ131] gi|304430814|gb|EFM33825.1| recombination protein R [Streptococcus pyogenes ATCC 10782] Length = 198 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|170718442|ref|YP_001783660.1| recombination protein RecR [Haemophilus somnus 2336] gi|189029365|sp|B0UWK7|RECR_HAES2 RecName: Full=Recombination protein recR gi|168826571|gb|ACA31942.1| recombination protein RecR [Haemophilus somnus 2336] Length = 201 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C Sbjct: 3 SSPLLENLIEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLAGALTEAMSKIGHCTHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC + +R S + VVE +D+ A+E++ + Y VL G LSPLD IGP++ Sbjct: 63 FTEEESCAICNNPRRQNSGFLCVVEQPSDIPAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + E+I A + T+EG+ TA+YI + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLQHESFYEVILATNPTVEGEATANYIAEMCFQHNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 TVDGTTLSHSLIGRREI 199 >gi|319947395|ref|ZP_08021627.1| recombination protein R [Streptococcus australis ATCC 700641] gi|319746335|gb|EFV98596.1| recombination protein R [Streptococcus australis ATCC 700641] Length = 198 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIESYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELSYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + CAIC D+ RD S I+VVED D+ A+E + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDEEECAICRDETRDPSTILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ +++E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLITRLMDHEVQEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|313890725|ref|ZP_07824350.1| recombination protein RecR [Streptococcus pseudoporcinus SPIN 20026] gi|332523484|ref|ZP_08399736.1| recombination protein RecR [Streptococcus porcinus str. Jelinkova 176] gi|313120826|gb|EFR43940.1| recombination protein RecR [Streptococcus pseudoporcinus SPIN 20026] gi|332314748|gb|EGJ27733.1| recombination protein RecR [Streptococcus porcinus str. Jelinkova 176] Length = 198 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIESYSKLPGIGVKTATRLAFYTISMSDDDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC+IC+D RD S I+VVE+ D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCSICMDPSRDKSQILVVEESKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++LI R+ ++E+I A SAT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKALITRLMDSDVQEVIIATSATADGEATSMYISRILKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|300727718|ref|ZP_07061104.1| recombination protein RecR [Prevotella bryantii B14] gi|299775006|gb|EFI71612.1| recombination protein RecR [Prevotella bryantii B14] Length = 203 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 128/200 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K+ + +E + +R+PG G +++ R LH++++ + + A++++ +V C Sbjct: 1 MEKQYPSRLLEKAVSEFSRLPGIGRKTSLRLVLHMLRQTNEDVDGFVSAISHLKKEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC D +RDAS + VVE++ D+ A+E ++ + LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTDVCPICSDPRRDASTVCVVENIQDVMAIENTQQYHGLYHVLGGIISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I SLI R+ + E+IFA+S+T+EG TT +I KL VK++ +A GI +G Sbjct: 121 GPADIEIDSLINRVAEGHVEEIIFALSSTMEGDTTNFFISRKLADFPVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSILNRTP 200 >gi|81427952|ref|YP_394951.1| recombination DNA repair protein RecR [Lactobacillus sakei subsp. sakei 23K] gi|123564718|sp|Q38YT8|RECR_LACSS RecName: Full=Recombination protein recR gi|78609593|emb|CAI54639.1| Recombination DNA repair protein RecR [Lactobacillus sakei subsp. sakei 23K] Length = 198 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 117/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI+ ++PG G ++A R + + E + A+ + + + CS+CGN Sbjct: 3 YPEPIAKLIESYMKLPGIGNKTATRLAFYTIDMNEDDVTNFAKNLISARRDLHYCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D R +I+VVE D+ ++ER + LYHVL G LSP++ GP+DI Sbjct: 63 ITDEDPCEICRDTARSQEMILVVEQPKDVMSMERMNDYHGLYHVLHGVLSPIEGKGPDDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +LI+R++ +E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIANLIKRLQKTPAKEVIIATNATPEGEATAMYISRLIKPAGIKVTRLAHGLAVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 183 ADEMTLLKAVEGRQEI 198 >gi|88705064|ref|ZP_01102776.1| Recombination protein recR [Congregibacter litoralis KT71] gi|88700759|gb|EAQ97866.1| Recombination protein recR [Congregibacter litoralis KT71] Length = 202 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 117/195 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R LHL+++ + L+ ++A+ +V C C N Sbjct: 4 FSPAMDALIEALRCLPGVGPKSAQRMALHLLERNREGAATLSRSLADAVERVGRCQQCRN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC D +RDAS++ +VE D+ A+E++ Y VL G LSP+D IGPE+I Sbjct: 64 LAEAVLCGICADTRRDASLLCIVETPGDILAIEQAGGYRGRYFVLMGHLSPIDGIGPEEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +++E+I A + T+EG+ TA+YI L+ + +++R+A+G+P+G EL+Y Sbjct: 124 GLPLLEALARDGEVQEVILATNPTVEGEATAYYITRMLEPLIPRMSRIAHGVPLGGELEY 183 Query: 186 LDDGTIFEAIRSRTV 200 +D T+ A R Sbjct: 184 VDGSTLAHAFSGRQP 198 >gi|16272391|ref|NP_438604.1| recombination protein RecR [Haemophilus influenzae Rd KW20] gi|68249043|ref|YP_248155.1| recombination protein RecR [Haemophilus influenzae 86-028NP] gi|145636288|ref|ZP_01791957.1| recombination protein RecR [Haemophilus influenzae PittHH] gi|145638647|ref|ZP_01794256.1| recombination protein RecR [Haemophilus influenzae PittII] gi|145640410|ref|ZP_01795994.1| recombination protein RecR [Haemophilus influenzae R3021] gi|148825277|ref|YP_001290030.1| recombination protein RecR [Haemophilus influenzae PittEE] gi|148827639|ref|YP_001292392.1| recombination protein RecR [Haemophilus influenzae PittGG] gi|229846529|ref|ZP_04466637.1| recombination protein RecR [Haemophilus influenzae 7P49H1] gi|260580494|ref|ZP_05848322.1| recombination protein RecR [Haemophilus influenzae RdAW] gi|260582291|ref|ZP_05850084.1| recombination protein RecR [Haemophilus influenzae NT127] gi|319775630|ref|YP_004138118.1| recombination protein RecR [Haemophilus influenzae F3047] gi|319898036|ref|YP_004136233.1| recombination protein recr [Haemophilus influenzae F3031] gi|329122321|ref|ZP_08250909.1| recombination protein R [Haemophilus aegyptius ATCC 11116] gi|1172899|sp|P44712|RECR_HAEIN RecName: Full=Recombination protein recR gi|73621490|sp|Q4QNA2|RECR_HAEI8 RecName: Full=Recombination protein recR gi|166221943|sp|A5UA46|RECR_HAEIE RecName: Full=Recombination protein recR gi|166221944|sp|A5UGV3|RECR_HAEIG RecName: Full=Recombination protein recR gi|1573419|gb|AAC22102.1| recombination protein (recR) [Haemophilus influenzae Rd KW20] gi|68057242|gb|AAX87495.1| recombination protein RecR [Haemophilus influenzae 86-028NP] gi|145270453|gb|EDK10387.1| recombination protein RecR [Haemophilus influenzae PittHH] gi|145272242|gb|EDK12150.1| recombination protein RecR [Haemophilus influenzae PittII] gi|145274996|gb|EDK14858.1| recombination protein RecR [Haemophilus influenzae 22.4-21] gi|148715437|gb|ABQ97647.1| recombination protein RecR [Haemophilus influenzae PittEE] gi|148718881|gb|ABR00009.1| recombination protein RecR [Haemophilus influenzae PittGG] gi|229810622|gb|EEP46340.1| recombination protein RecR [Haemophilus influenzae 7P49H1] gi|260092836|gb|EEW76771.1| recombination protein RecR [Haemophilus influenzae RdAW] gi|260094659|gb|EEW78554.1| recombination protein RecR [Haemophilus influenzae NT127] gi|301169143|emb|CBW28740.1| gap repair protein [Haemophilus influenzae 10810] gi|309750141|gb|ADO80125.1| Recombination protein RecR [Haemophilus influenzae R2866] gi|309972400|gb|ADO95601.1| Recombination protein RecR [Haemophilus influenzae R2846] gi|317433542|emb|CBY81926.1| recombination protein RecR [Haemophilus influenzae F3031] gi|317450221|emb|CBY86437.1| recombination protein RecR [Haemophilus influenzae F3047] gi|327473882|gb|EGF19299.1| recombination protein R [Haemophilus aegyptius ATCC 11116] Length = 200 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C + Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRQI 199 >gi|288904860|ref|YP_003430082.1| recombination protein RecR [Streptococcus gallolyticus UCN34] gi|288731586|emb|CBI13141.1| recombination protein RecR [Streptococcus gallolyticus UCN34] Length = 198 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD SVI+VVED D+ A+E+ + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCNICTDETRDRSVILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|148556943|ref|YP_001264525.1| recombination protein RecR [Sphingomonas wittichii RW1] gi|166221969|sp|A5VDM1|RECR_SPHWW RecName: Full=Recombination protein recR gi|148502133|gb|ABQ70387.1| recombination protein RecR [Sphingomonas wittichii RW1] Length = 198 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 107/196 (54%), Positives = 146/196 (74%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ EIE L + LA++PG GPRSARRA LHL+KK+E LGPL A+ + +K+ C +CG Sbjct: 1 MSSPEIETLTQALAKLPGLGPRSARRAVLHLLKKREAALGPLLRALEAVNDKLTSCHVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT DPC IC D +RDA ++ VVE+VADLWAL+RS+ +HVLGG LS L+ I PED Sbjct: 61 NVDTGDPCGICADPRRDARMLCVVEEVADLWALDRSRLFPGRFHVLGGRLSALEGIRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I LI RI I E++ A++AT+EGQTTAHYI D+L+ V++T+LA+G+P+G ELD Sbjct: 121 LSIDLLIGRIAAGGIDEVVLAMNATLEGQTTAHYIADRLESFPVRLTQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|254490431|ref|ZP_05103617.1| recombination protein RecR [Methylophaga thiooxidans DMS010] gi|224464175|gb|EEF80438.1| recombination protein RecR [Methylophaga thiooxydans DMS010] Length = 199 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 120/201 (59%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G I+ LI L +PG GP+SA+R T HL+++ + LA+A+ + + V C Sbjct: 1 MAS--LGPSIDELISALRCLPGVGPKSAQRMTFHLLERNREGGAHLAKALMDALDNVQHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + +D C C D++R + +VE +D+ A+E++ Y VL G LSPLD I Sbjct: 59 RRCRILCESDICIRCQDERRQQDQLCIVEMPSDVLAIEQATHYKGQYFVLSGHLSPLDGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE +GI LIE ++ K I E+I A + T+EG+ TAHYI + + +K+TRLA+GIP+G Sbjct: 119 GPEALGIPRLIEWLDEKTILEVILATNPTVEGEATAHYISELARERQIKVTRLAHGIPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+++D GT+ A R + Sbjct: 179 GELEFIDSGTLSHAFSGRESI 199 >gi|237743984|ref|ZP_04574465.1| recombination protein recR [Fusobacterium sp. 7_1] gi|229433015|gb|EEO43227.1| recombination protein recR [Fusobacterium sp. 7_1] Length = 197 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 115/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKKFAEALLAVKENVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCSICSDNTRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|152978672|ref|YP_001344301.1| recombination protein RecR [Actinobacillus succinogenes 130Z] gi|171704263|sp|A6VN19|RECR_ACTSZ RecName: Full=Recombination protein recR gi|150840395|gb|ABR74366.1| recombination protein RecR [Actinobacillus succinogenes 130Z] Length = 200 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +ENL++ L +PG GP+SA+R HL+++ LA A+ + +K+ CS C Sbjct: 3 SSPLLENLVEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLARALTDAMSKIGHCSQCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEQETCAICDNPRRQHSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + E+I A + TIEG TA+YI + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQQRLQNEHFHEVILATNPTIEGDATANYIAEMCMQRNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R L Sbjct: 183 TVDGTTLTHSFLGRREL 199 >gi|158318301|ref|YP_001510809.1| recombination protein RecR [Frankia sp. EAN1pec] gi|158113706|gb|ABW15903.1| recombination protein RecR [Frankia sp. EAN1pec] Length = 199 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 116/195 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++++I L ++PG GP+SA+R HL+ + LA A+ + KV C IC Sbjct: 1 MYEGIVQDVIDELGQLPGIGPKSAQRIAFHLLAADPADVRRLASALTELKEKVRFCRICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D Sbjct: 61 NVAQSELCRICSDPRRDPTSICVVEESKDVVAIERTREFRGKYHVLGGAINPIGGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ + E+I A EG+ TA Y+ ++ + + +TRLA G+PMG +L+ Sbjct: 121 LHIRELVARLADGTVTEIILATDPNTEGEVTASYLARQIGPMGLTVTRLASGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 + D+ T+ A R Sbjct: 181 WADEVTLGRAFEGRR 195 >gi|171778656|ref|ZP_02919752.1| hypothetical protein STRINF_00604 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282613|gb|EDT48037.1| hypothetical protein STRINF_00604 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 198 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC DQ RD SV++VVED D+ A+E+ + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDEDPCQICNDQTRDRSVLLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVSEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|170078351|ref|YP_001734989.1| recombination protein [Synechococcus sp. PCC 7002] gi|169886020|gb|ACA99733.1| recombination protein [Synechococcus sp. PCC 7002] Length = 189 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 123/188 (65%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ R+PG GP++A+R L+++K+ E+ + A+A+ N +V +C C ++ T C Sbjct: 2 IEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVCD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC + QR+ VI VV D D+ ALE+++ YHVLGG +SP+D IGPE + IQ+L++R Sbjct: 62 ICRNPQREPDVICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + +K +E+I AI+ ++EG+TT Y+ L+ K+TR+A+G+PMG +L+Y D+ T+ Sbjct: 122 VSAEKTKEVILAINPSVEGETTTLYLAQLLRPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180 Query: 194 AIRSRTVL 201 A+ R L Sbjct: 181 ALEGRREL 188 >gi|322389126|ref|ZP_08062689.1| recombination protein R [Streptococcus parasanguinis ATCC 903] gi|321144168|gb|EFX39583.1| recombination protein R [Streptococcus parasanguinis ATCC 903] Length = 198 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + N ++ CSICG Sbjct: 2 LYPAPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLNAKRELGYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D+ RD S+I+VVED D+ A+E + + YHVL G +SP++ +GP+D Sbjct: 62 NLTDEETCEICRDETRDPSLILVVEDSRDVSAMENIQEYHGRYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++LI R+ + E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++ Sbjct: 122 INLKTLISRLMDGTVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|86610315|ref|YP_479077.1| recombination protein RecR [Synechococcus sp. JA-2-3B'a(2-13)] gi|123500273|sp|Q2JH53|RECR_SYNJB RecName: Full=Recombination protein recR gi|86558857|gb|ABD03814.1| recombination protein RecR [Synechococcus sp. JA-2-3B'a(2-13)] Length = 199 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 2/199 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L R+PG G ++A+R LHL+ + + LA+A+ V CSIC Sbjct: 1 MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N DPC IC QRD S+ VV DV DL A+ER++ LYHVLGG +SP++ IG + Sbjct: 61 NWSAEDPCEICRSPQRDPSLWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSE 182 + I+ L+ R+ +K +ELIFAIS ++EG+ T H + D LK +++TRLA+G+PMGSE Sbjct: 121 LHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLKPVAPTLRMTRLAFGLPMGSE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ A+ +R L Sbjct: 181 LEYADEVTLARALEARQEL 199 >gi|293373050|ref|ZP_06619419.1| recombination protein RecR [Bacteroides ovatus SD CMC 3f] gi|292632118|gb|EFF50727.1| recombination protein RecR [Bacteroides ovatus SD CMC 3f] Length = 205 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 123/199 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDVSTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ ++E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVQRVAEGGVKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|331701732|ref|YP_004398691.1| Recombination protein recR [Lactobacillus buchneri NRRL B-30929] gi|329129075|gb|AEB73628.1| Recombination protein recR [Lactobacillus buchneri NRRL B-30929] Length = 199 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + V E + ++A+ N + CSICGN Sbjct: 3 YPEAIAKLIDSYMKLPGIGSKTATRLAFYTVDMNEDDVKAFSKALVATKNDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE+ D+ +E+ + + LYHVL G LSP++ GPED+ Sbjct: 63 LTDEDPCEICRDKTRDQSTILVVEEPKDVMVMEKVQEYHGLYHVLHGVLSPIEGKGPEDL 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SLI+R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 123 NISSLIKRLQQNKAVKEVIVATNATPEGEATAMYLSKLIKPAGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 183 YADEVTLFKAVQGRTEI 199 >gi|322385092|ref|ZP_08058739.1| recombination protein R [Streptococcus cristatus ATCC 51100] gi|321270716|gb|EFX53629.1| recombination protein R [Streptococcus cristatus ATCC 51100] Length = 198 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC DQ RD +VI++VED D+ A+E + + LYHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCAICTDQTRDQTVILIVEDSRDVSAMENIQEYHGLYHVLHGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLLTRLMDSQVMEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|75908470|ref|YP_322766.1| recombination protein RecR [Anabaena variabilis ATCC 29413] gi|123609556|sp|Q3MAW5|RECR_ANAVT RecName: Full=Recombination protein recR gi|75702195|gb|ABA21871.1| DNA replication and repair protein RecR [Anabaena variabilis ATCC 29413] Length = 185 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76 + R+PG GP++A+R LH++K+ E + LA+A+ ++ LCS+C ++ + C IC Sbjct: 1 MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICR 60 Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136 + R+ + I VV D D+ ALE+++ YHVLGG +SP+D IGPE + I L+ R+ Sbjct: 61 NPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQ 120 Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196 ++ +E+I AIS ++EG+TT Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+ Sbjct: 121 QQPKEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYADEITLARALE 179 Query: 197 SRTVL 201 R L Sbjct: 180 GRREL 184 >gi|306830912|ref|ZP_07464074.1| recombination protein R [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426935|gb|EFM30045.1| recombination protein R [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 200 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 123/201 (61%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + I LI ++PG G ++A R + + ++ + A+ + ++ C Sbjct: 1 MTM-LYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CGN+ DPC IC D+ RD SVI+VVED D+ A+E+ + LYHVL G +SP++ + Sbjct: 60 SVCGNLTDEDPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYRGLYHVLHGLISPMNGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+DI ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G Sbjct: 120 GPDDINLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S+++Y D+ T+ AI +RT L Sbjct: 180 SDIEYADEVTLLRAIENRTEL 200 >gi|145628813|ref|ZP_01784613.1| recombination protein RecR [Haemophilus influenzae 22.1-21] gi|144979283|gb|EDJ88969.1| recombination protein RecR [Haemophilus influenzae 22.1-21] Length = 200 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C + Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDICNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRQI 199 >gi|218130919|ref|ZP_03459723.1| hypothetical protein BACEGG_02520 [Bacteroides eggerthii DSM 20697] gi|217987263|gb|EEC53594.1| hypothetical protein BACEGG_02520 [Bacteroides eggerthii DSM 20697] Length = 205 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 128/200 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFPSILLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLEIESLVQRVAGGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRTP 200 >gi|254412067|ref|ZP_05025842.1| recombination protein RecR [Microcoleus chthonoplastes PCC 7420] gi|196181033|gb|EDX76022.1| recombination protein RecR [Microcoleus chthonoplastes PCC 7420] Length = 189 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 76/188 (40%), Positives = 121/188 (64%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ L R+PG GP++A+R LH++K+ E + LA+A+ +V LC +C ++ C Sbjct: 2 IEQLQRLPGVGPKTAQRLALHIIKRSEDEVKALAQALIEAKKQVGLCQVCFHLSAESVCD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC + RD + + VV D D+ ALE+++ YHVLGG +SP+D IGPE + ++ L+ R Sbjct: 62 ICRNPNRDKTTLCVVADSRDVIALEKTREYRGNYHVLGGVISPMDGIGPEQLHVEQLVRR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + +KI+E+I AIS ++EG+TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+ Sbjct: 122 VSQQKIQEVILAISPSVEGETTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180 Query: 194 AIRSRTVL 201 A+ R L Sbjct: 181 ALEGRREL 188 >gi|315187316|gb|EFU21072.1| DNA replication and repair protein RecR [Spirochaeta thermophila DSM 6578] Length = 202 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 112/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E LI L+R+PG G +SA R L+K + L + + ++V CS CG Sbjct: 3 SLEVLIGHLSRLPGVGKKSASRIAHWLLKADRAFVQALGRLIMELPDRVKRCSRCGMYSD 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C IC D RD I VVE +D+WA+E + LYHVL G+++PL+ + PED+ I Sbjct: 63 ATLCEICSDPARDHRTICVVEQPSDVWAIEATHTYRGLYHVLHGAIAPLEGVRPEDLTID 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L+ R+E + + E+I A + T+EG TTA Y++ LK K++RLA G+P+G +L+Y D Sbjct: 123 ALVRRLEREPVEEVIIATNPTVEGDTTALYLVRLLKDWGGKVSRLALGLPVGGDLEYADR 182 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R + Sbjct: 183 VTLARALEGRQRI 195 >gi|145634560|ref|ZP_01790269.1| recombination protein RecR [Haemophilus influenzae PittAA] gi|145268105|gb|EDK08100.1| recombination protein RecR [Haemophilus influenzae PittAA] Length = 200 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+LI+ L +PG GP+SA+R HL++ LA A+ +K+ CS C + Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQHNRSGGMNLARALTEAMSKIGHCSQCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQQNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRQI 199 >gi|145632688|ref|ZP_01788422.1| recombination protein RecR [Haemophilus influenzae 3655] gi|229844397|ref|ZP_04464537.1| recombination protein RecR [Haemophilus influenzae 6P18H1] gi|144986883|gb|EDJ93435.1| recombination protein RecR [Haemophilus influenzae 3655] gi|229812646|gb|EEP48335.1| recombination protein RecR [Haemophilus influenzae 6P18H1] Length = 200 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C + Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQQNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRQI 199 >gi|262407940|ref|ZP_06084488.1| recombination protein RecR [Bacteroides sp. 2_1_22] gi|294644003|ref|ZP_06721785.1| recombination protein RecR [Bacteroides ovatus SD CC 2a] gi|294807757|ref|ZP_06766550.1| recombination protein RecR [Bacteroides xylanisolvens SD CC 1b] gi|262354748|gb|EEZ03840.1| recombination protein RecR [Bacteroides sp. 2_1_22] gi|292640656|gb|EFF58892.1| recombination protein RecR [Bacteroides ovatus SD CC 2a] gi|294445193|gb|EFG13867.1| recombination protein RecR [Bacteroides xylanisolvens SD CC 1b] Length = 205 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPNDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|153006598|ref|YP_001380923.1| recombination protein RecR [Anaeromyxobacter sp. Fw109-5] gi|171769313|sp|A7HGU3|RECR_ANADF RecName: Full=Recombination protein recR gi|152030171|gb|ABS27939.1| recombination protein RecR [Anaeromyxobacter sp. Fw109-5] Length = 198 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 83/193 (43%), Positives = 120/193 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I L+K LA++PG G ++A+R H++K G LA A+A + V LCS C + Sbjct: 6 PIARLVKELAKLPGIGEKTAQRLAFHILKAGPGYAGELAGAIAGVVRDVRLCSECQTLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPCA+C D +RD+ +I VVE V DL A+ER+ YHVL G+LSPLD IGP ++ I+ Sbjct: 66 KDPCAVCADPRRDSRIICVVEGVPDLLAVERTHEFRGRYHVLHGALSPLDGIGPSELKIR 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+E + E++ A + +EG+ TA Y+ LK + VK+TR+A GIPMG +L+Y D Sbjct: 126 ELLLRLEREPAEEIVVATNPDVEGEATALYLTKLLKPLGVKVTRIAQGIPMGGDLEYADQ 185 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R L Sbjct: 186 VTLARALAGRREL 198 >gi|110598754|ref|ZP_01387015.1| recombination protein RecR [Chlorobium ferrooxidans DSM 13031] gi|110339618|gb|EAT58132.1| recombination protein RecR [Chlorobium ferrooxidans DSM 13031] Length = 204 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 131/204 (64%), Gaps = 5/204 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T IE LI+ A++PG G ++A+R ++++ + LA A+ ++ +KV CS+ Sbjct: 1 MRYTSAAIEALIEEFAKLPGVGRKTAQRLAMYVLHEPRAEAEKLASALLDVKDKVIRCSV 60 Query: 63 CGNV--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV +DPCA+C + RD SVI VVE D+ A E++ LYHVL G +SPLD I Sbjct: 61 CQNVTDKESDPCAVCSSRARDRSVICVVESPVDMLAFEKTGFYKGLYHVLHGVISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKI---RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI ++ L+ R ++ +E++ A++ TIEG+TT+ Y+ LK + V++T++A GI Sbjct: 121 GPDDIKVRELLVRFSGQESGEVKEVVLALNPTIEGETTSLYLSKLLKPLGVQVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G+EL+++D+ T+ A+ R+ + Sbjct: 181 PVGAELEFVDEATLSRAMEGRSAM 204 >gi|329955111|ref|ZP_08296092.1| recombination protein RecR [Bacteroides clarus YIT 12056] gi|328526401|gb|EGF53416.1| recombination protein RecR [Bacteroides clarus YIT 12056] Length = 205 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 127/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFPSILLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E++ A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLEIESLVQRVSAGGIKEVVLALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRTP 200 >gi|325680621|ref|ZP_08160163.1| recombination protein RecR [Ruminococcus albus 8] gi|324107691|gb|EGC01965.1| recombination protein RecR [Ruminococcus albus 8] Length = 200 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 118/189 (62%) Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72 L + A++PG G +SA+R H+++ LA+A+ N++ V LC C N C Sbjct: 12 LTEQFAKLPGIGMKSAQRIAYHVMEMNADEAKALADAVMNVHKTVHLCKYCQNYTDRHVC 71 Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC D +RD S++ VV+ D+ A+ER+ +YHVL G +SPL+ I P+D+ I+ L+ Sbjct: 72 PICDDNRRDHSLVCVVQSPQDITAIERTNEYKGVYHVLHGLISPLNGISPDDLKIKELLA 131 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 RI I E+I A + T++G TA+YI LK + VK+TRLA+G+P+G +L+Y D+ T++ Sbjct: 132 RINAGGIDEIIMATNPTVDGDATAYYISKLLKPLGVKVTRLAFGLPIGGQLEYADEITLY 191 Query: 193 EAIRSRTVL 201 +A+ +R + Sbjct: 192 KALENRNEI 200 >gi|297717872|gb|ADI50079.1| recombination protein RecR [Candidatus Odyssella thessalonicensis L13] Length = 197 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 97/196 (49%), Positives = 140/196 (71%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EI+ LI+ L+++PG GPRS RR LHL+KK+E++ PL + MA KV C IC Sbjct: 1 MNSPEIQLLIQHLSKLPGLGPRSGRRVALHLLKKREKIFRPLIQVMAEAEQKVRTCHICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 +D +DPC +C D +RD + VVEDVADLWALER+ +YHVLGG LS +D IGP+ Sbjct: 61 ALDASDPCTLCTDPKRDPHQLCVVEDVADLWALERANTYRGVYHVLGGVLSAIDGIGPQQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + IQSL++R+ + E+I A++AT++GQTT HY++++L+ +KIT LA+G+P+G ELD Sbjct: 121 LTIQSLLDRVAKGSVHEVILALNATVDGQTTIHYLIEQLREHKIKITTLAHGVPIGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+F A ++R Sbjct: 181 YLDEGTLFTAFQARRS 196 >gi|223932692|ref|ZP_03624691.1| recombination protein RecR [Streptococcus suis 89/1591] gi|302023962|ref|ZP_07249173.1| recombination protein RecR [Streptococcus suis 05HAS68] gi|330832451|ref|YP_004401276.1| recombination protein RecR [Streptococcus suis ST3] gi|223898662|gb|EEF65024.1| recombination protein RecR [Streptococcus suis 89/1591] gi|329306674|gb|AEB81090.1| recombination protein RecR [Streptococcus suis ST3] Length = 198 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ ++ A+ + + CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKTLLTRLMDNEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|298484196|ref|ZP_07002361.1| recombination protein RecR [Bacteroides sp. D22] gi|299145431|ref|ZP_07038499.1| recombination protein RecR [Bacteroides sp. 3_1_23] gi|298269609|gb|EFI11205.1| recombination protein RecR [Bacteroides sp. D22] gi|298515922|gb|EFI39803.1| recombination protein RecR [Bacteroides sp. 3_1_23] Length = 205 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|332290072|ref|YP_004420924.1| recombination protein RecR [Gallibacterium anatis UMN179] gi|330432968|gb|AEC18027.1| recombination protein RecR [Gallibacterium anatis UMN179] Length = 200 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++ L+ L +PG GP+SA+R +L+++ LA+ + + CS C Sbjct: 4 SPLLDELMDALRCLPGVGPKSAQRMAYYLLQRDRSGAMNLAKTLTEAMAHIGHCSQCRTF 63 Query: 67 DTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC + +R + +VE +D+ A+E++ + Y VL G LSPLD IGP++I Sbjct: 64 TEEEVCNICNNYRRQENGQLCIVEMPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +R++ + E+I A + TIEG TA+YI + + VK++R+A+GIP+G EL+ Sbjct: 124 GLDLLQKRLQTESFSEVILATNPTIEGDATANYIAEMCQQYGVKVSRIAHGIPVGGELEM 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ + R L Sbjct: 184 VDGTTLSHSFIGRREL 199 >gi|158421771|ref|YP_001523063.1| recombination protein RecR [Azorhizobium caulinodans ORS 571] gi|172048018|sp|A8IGX4|RECR_AZOC5 RecName: Full=Recombination protein recR gi|158328660|dbj|BAF86145.1| recombination protein [Azorhizobium caulinodans ORS 571] Length = 201 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 112/201 (55%), Positives = 153/201 (76%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++L R+PG GPRSARRATLHL+KK+E L+ PL A+ ++ K+ C Sbjct: 1 MSRAVAGPEIERLIQLLGRLPGLGPRSARRATLHLIKKRETLMAPLGLALQDVLGKIVEC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CGNVD DPC +C D RD+SV++VV +VADLWALER+ A+NA YHVLGG LSPLD + Sbjct: 61 QVCGNVDVRDPCTVCTDIHRDSSVLVVVAEVADLWALERANAINAKYHVLGGVLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ + L+ER+ + E+I A+ AT++ QTTAHY+ D L+ VK+TRLA+G+P+G Sbjct: 121 GPDDLNLTKLVERVGAGGVNEVILALGATVDAQTTAHYVTDLLRETGVKVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELD+LD+GT+ AIR+RT L Sbjct: 181 GELDHLDEGTLSAAIRARTAL 201 >gi|237740850|ref|ZP_04571331.1| recombination protein recR [Fusobacterium sp. 4_1_13] gi|229431147|gb|EEO41359.1| recombination protein recR [Fusobacterium sp. 4_1_13] Length = 197 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 115/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C+IC D R+ +I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCSICSDNIRNHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|146319007|ref|YP_001198719.1| recombination protein RecR [Streptococcus suis 05ZYH33] gi|253752074|ref|YP_003025215.1| recombination protein RecR [Streptococcus suis SC84] gi|253753899|ref|YP_003027040.1| recombination protein RecR [Streptococcus suis P1/7] gi|253755226|ref|YP_003028366.1| recombination protein RecR [Streptococcus suis BM407] gi|166223509|sp|A4VW30|RECR_STRSY RecName: Full=Recombination protein recR gi|145689813|gb|ABP90319.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus suis 05ZYH33] gi|251816363|emb|CAZ51994.1| recombination protein RecR [Streptococcus suis SC84] gi|251817690|emb|CAZ55438.1| recombination protein RecR [Streptococcus suis BM407] gi|251820145|emb|CAR46477.1| recombination protein RecR [Streptococcus suis P1/7] gi|292558657|gb|ADE31658.1| RecR protein [Streptococcus suis GZ1] gi|319758440|gb|ADV70382.1| recombination protein RecR [Streptococcus suis JS14] Length = 198 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ ++ A+ + + CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++L+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKTLLTRLMENEVTEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|237720984|ref|ZP_04551465.1| recombination protein recR [Bacteroides sp. 2_2_4] gi|229449819|gb|EEO55610.1| recombination protein recR [Bacteroides sp. 2_2_4] Length = 205 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 123/199 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDVSTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|294785975|ref|ZP_06751262.1| recombination protein RecR [Fusobacterium sp. 3_1_27] gi|294486312|gb|EFG33675.1| recombination protein RecR [Fusobacterium sp. 3_1_27] Length = 197 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 115/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C+IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCSICSDNIRDHKIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRVEI 197 >gi|78484876|ref|YP_390801.1| recombination protein RecR [Thiomicrospira crunogena XCL-2] gi|123555876|sp|Q31I96|RECR_THICR RecName: Full=Recombination protein recR gi|78363162|gb|ABB41127.1| DNA replication and repair protein RecR [Thiomicrospira crunogena XCL-2] Length = 197 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 109/195 (55%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +P GP+SA+R L++ +Q LA A+ + KV C C Sbjct: 1 MQSPVINELIDAFKLLPTIGPKSAQRLAYFLLQNHQQDGHRLASAIESALEKVGYCQQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ T+ C C + R + +VE D+ A+E+S Y VL G LSP+D IGP++ Sbjct: 61 NLSETEICGFCASKSRQTDQLCIVETPTDVVAIEQSGIYKGQYFVLMGHLSPIDGIGPDE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +R+ +I+ELI A + T+EG+ TAHYI ++ +TRLA GIP+G EL+ Sbjct: 121 LGLPILRDRLAQGEIQELILATNPTVEGEATAHYIQQMAIEFNISVTRLAQGIPLGGELE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y+D GT+ +A R Sbjct: 181 YIDSGTLGQAFAGRK 195 >gi|315925751|ref|ZP_07921958.1| recombination protein R [Pseudoramibacter alactolyticus ATCC 23263] gi|315620860|gb|EFV00834.1| recombination protein R [Pseudoramibacter alactolyticus ATCC 23263] Length = 200 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 125/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E L+ L+++PG G ++A+R HL+ ++ + L+ A+ ++ K+ LC + Sbjct: 1 MGLYPKAVERLVAELSKLPGIGEKTAQRLAFHLIDAPKEDIAGLSRALLDVKEKIKLCPV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ D C IC D RD SV+ VVE+ D++A+ER++ + LYHVL G +SPL+ IGP Sbjct: 61 CFSITDGDRCDICADASRDRSVLCVVENTRDIYAIERTREYHGLYHVLHGVISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +DI + L+ R+ + E+I A + T EG+ TA Y+ + + + V +TRLA GIP+G++ Sbjct: 121 QDIKARELMLRLADGTVTEVIMATNPTPEGEATAVYLGNLITPMGVTVTRLAKGIPIGAD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +++ D+ T+ +A R + Sbjct: 181 VEFTDEVTLIKAFEGRKQI 199 >gi|312863516|ref|ZP_07723754.1| recombination protein RecR [Streptococcus vestibularis F0396] gi|311101052|gb|EFQ59257.1| recombination protein RecR [Streptococcus vestibularis F0396] Length = 198 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC+D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D Sbjct: 62 RLTDDDPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|320333444|ref|YP_004170155.1| Recombination protein recR [Deinococcus maricopensis DSM 21211] gi|319754733|gb|ADV66490.1| Recombination protein recR [Deinococcus maricopensis DSM 21211] Length = 198 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L+R+PG GP+SA+R HL ++ + LA A+ + + C C N Sbjct: 3 YPPSLVALIRELSRLPGVGPKSAQRLAFHLFEQPREDTERLASAIMSAKRDLHTCPKCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD +I VVE+ DL A+ERS LYHVL G++SP++ +GP+ + Sbjct: 63 ITDREFCDVCTDPARDQELICVVEEPGDLIAIERSGEYRGLYHVLHGAISPMNGVGPDKL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R+ E+I A S T+EG+ T+ Y+ L+ + ++R+AYG+P+G L+Y Sbjct: 123 MIKPLLPRVAAG--MEVILATSTTVEGEATSLYLQRLLEPLGATVSRIAYGLPVGGALEY 180 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A+ R L Sbjct: 181 ADEVTLGRALTGRQRL 196 >gi|166367420|ref|YP_001659693.1| recombination protein RecR [Microcystis aeruginosa NIES-843] gi|166089793|dbj|BAG04501.1| recombination protein [Microcystis aeruginosa NIES-843] Length = 188 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 80/188 (42%), Positives = 122/188 (64%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ L ++PG GP+SA+R L+++K+ EQ LA+A+ +V LC +C ++ C Sbjct: 2 IEQLQKLPGVGPKSAQRLALYILKRPEQDAIELAQAIVAAKKQVGLCQVCFHLSAEPICE 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC + R+ I VV D D+ ALE+++ + YHVLGG +SP+D IGP+ + IQSL+ R Sbjct: 62 ICRNPNRETGTICVVADSRDVIALEKTREYSGKYHVLGGVISPMDGIGPDQLNIQSLVTR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + KKI+E+I AIS ++EG+TT YI LK K+TR+A+G+PMG +L+Y D+ T+ Sbjct: 122 VSQKKIQEVILAISPSVEGETTTLYIGGLLKPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180 Query: 194 AIRSRTVL 201 A+ R L Sbjct: 181 ALEGRREL 188 >gi|163814834|ref|ZP_02206222.1| hypothetical protein COPEUT_00984 [Coprococcus eutactus ATCC 27759] gi|158449773|gb|EDP26768.1| hypothetical protein COPEUT_00984 [Coprococcus eutactus ATCC 27759] Length = 199 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 113/199 (56%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ G E+ LI+ L R+PG G ++A+R H++ E L++A+ N + CS Sbjct: 1 MEVYGGEVNRLIEELGRLPGIGTKTAQRLAFHIISMPEDRAFALSDAIVNAKKNIKYCSC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC R+ +I+VVE DL A ER+ + +YHVL G ++P IGP Sbjct: 61 CYTITDREVCPICSSPNRNHKLIMVVETPRDLAAYERTGQFDGVYHVLHGVINPALGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI I L+ R++ + + ELI A + EG+ TA YI +K +K++R+A G+P+G + Sbjct: 121 ADIKISELMRRLQSEDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D+ T+ A+ R L Sbjct: 181 LECIDEVTLLRALEGRVYL 199 >gi|94495736|ref|ZP_01302316.1| recombinational DNA repair protein [Sphingomonas sp. SKA58] gi|94425124|gb|EAT10145.1| recombinational DNA repair protein [Sphingomonas sp. SKA58] Length = 198 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 97/196 (49%), Positives = 143/196 (72%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EIE L + L+R+PG GPRSARRA LHL+K++E + PL A+ + ++ C +CG Sbjct: 1 MASPEIETLTQALSRLPGLGPRSARRAVLHLLKRREGAMEPLLRALEAVNERLVTCHLCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT DPC IC D +RD + VVEDV+DLWAL++S+ +HVLGG LS LD + PED Sbjct: 61 NVDTVDPCGICADPRRDPRALCVVEDVSDLWALDKSRLFPGRFHVLGGRLSALDGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ R+E I E++ A++AT+EGQTTAHY+ ++L+ +++T+LA+G+P+G ELD Sbjct: 121 LTIDALVARVEAGGIDEVVLAMNATLEGQTTAHYLAERLERFPIRLTQLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|281424030|ref|ZP_06254943.1| recombination protein RecR [Prevotella oris F0302] gi|281401813|gb|EFB32644.1| recombination protein RecR [Prevotella oris F0302] Length = 203 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 129/200 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K +E + A++PG G +SA R L++++++ + + +A+ + ++V C Sbjct: 1 MSDKYASALLEKAVSEFAKLPGIGRKSALRLVLYMLRREHEEVDAFGKAITTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC D +RD + I VVE++ D+ A+E+++ N LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTDVCPICSDIRRDDTTICVVENIQDVMAVEKTQQYNGLYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I+SL+ER++ K++E+I A+S+T+EG TT YI KL V ++ +A GI +G Sbjct: 121 GPNDIEIESLVERVKGGKVKEVILALSSTMEGDTTNFYISRKLAAYGVDVSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIINRTP 200 >gi|295094178|emb|CBK83269.1| recombination protein RecR [Coprococcus sp. ART55/1] Length = 199 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 114/199 (57%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ G E+ LI+ L R+PG G ++A+R H++ E+ L++A+ N + CS Sbjct: 1 MEVYGGEVNRLIEGLGRLPGIGSKTAQRLAFHIISMPEERALALSDAIVNAKKNIKYCSC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC R+ VI+VVE DL A ER+ + +YHVL G ++P IGP Sbjct: 61 CYTITDREVCPICSSPNRNHKVIMVVETPRDLAAYERTGQFDGVYHVLHGVINPALGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI I L+ R++ + + ELI A + EG+ TA YI +K +K++R+A G+P+G + Sbjct: 121 ADIRISELMRRLQNEDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D+ T+ A+ R L Sbjct: 181 LECIDEVTLLRALEGRVYL 199 >gi|114799985|ref|YP_759100.1| recombination protein RecR [Hyphomonas neptunium ATCC 15444] gi|123323639|sp|Q0C593|RECR_HYPNA RecName: Full=Recombination protein recR gi|114740159|gb|ABI78284.1| recombination protein RecR [Hyphomonas neptunium ATCC 15444] Length = 201 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 108/199 (54%), Positives = 144/199 (72%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ G E+ LI ++A++PG GPRSARR LHL+K+ + LL PLAEA+A K+ C Sbjct: 1 MSQRSAGPELLRLIDLIAKLPGLGPRSARRVALHLLKRNDTLLKPLAEALAEAGAKIQKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + CGN DT PCA+C RD +I VVEDV DLWALER + YHVLGG+LS +D I Sbjct: 61 ATCGNFDTVQPCAVCQMPGRDDGIICVVEDVPDLWALERGGSFRGRYHVLGGALSAIDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+GI SL+ R++ +RE+I A++AT++GQTTAHY+ D L G V +TRLA+G+P+G Sbjct: 121 GPEDLGIASLVARVDAGGVREVILALNATVDGQTTAHYVADLLAGKGVDVTRLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELD+LDDGT+ A+RSR Sbjct: 181 GELDHLDDGTLAAALRSRR 199 >gi|15602071|ref|NP_245143.1| recombination protein RecR [Pasteurella multocida subsp. multocida str. Pm70] gi|13431793|sp|P57826|RECR_PASMU RecName: Full=Recombination protein recR gi|12720430|gb|AAK02290.1| RecR [Pasteurella multocida subsp. multocida str. Pm70] Length = 200 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C Sbjct: 3 TSPLLEHLIESLRCLPGVGPKSAQRMAYHLLQRNRNGGMELARALTEAMSKIGHCSHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++ Sbjct: 63 FTEEEVCTICNNPRRQHSGLLCVVEQPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + E+I A + T+EG TA+YI + ++K+TR+A+GIP+G EL+ Sbjct: 123 IGLHLLQKRLQEESFHEVILATNPTVEGDATANYIAELCMQQNIKVTRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R L Sbjct: 183 MVDGTTLTHSFLGRRQL 199 >gi|319902361|ref|YP_004162089.1| DNA replication and repair protein RecR [Bacteroides helcogenes P 36-108] gi|319417392|gb|ADV44503.1| DNA replication and repair protein RecR [Bacteroides helcogenes P 36-108] Length = 205 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 126/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ + A+ + ++V C Sbjct: 1 MNGQYPSTLLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTMAVEAFGNAIITLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD+SV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTEICRICSNPQRDSSVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLQIESLVQRVSSGDIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRTP 200 >gi|189466061|ref|ZP_03014846.1| hypothetical protein BACINT_02426 [Bacteroides intestinalis DSM 17393] gi|189434325|gb|EDV03310.1| hypothetical protein BACINT_02426 [Bacteroides intestinalis DSM 17393] Length = 205 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 126/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFSSILLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD S + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCRICANPQRDDSTVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLQIESLVQRVSAGGIKEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRTP 200 >gi|139473554|ref|YP_001128270.1| recombination protein RecR [Streptococcus pyogenes str. Manfredo] gi|166223507|sp|A2RDV9|RECR_STRPG RecName: Full=Recombination protein recR gi|134271801|emb|CAM30034.1| recombination protein RecR [Streptococcus pyogenes str. Manfredo] Length = 198 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD + I+VVED D+ A+E+ + YHVL G +SP++ +GP+D Sbjct: 62 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYRGYYHVLHGLISPMNGMGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|322517156|ref|ZP_08070040.1| recombination protein R [Streptococcus vestibularis ATCC 49124] gi|322124306|gb|EFX95817.1| recombination protein R [Streptococcus vestibularis ATCC 49124] Length = 202 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 122/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 6 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVCG 65 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC+D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D Sbjct: 66 RLTDDDPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 125 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 126 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 185 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 186 YADEVTLLRAIENRTEL 202 >gi|254448821|ref|ZP_05062277.1| recombination protein RecR [gamma proteobacterium HTCC5015] gi|198261511|gb|EDY85800.1| recombination protein RecR [gamma proteobacterium HTCC5015] Length = 199 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 112/195 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + LI+ +PG GP+SA+R H ++++ LA + ++ C C N Sbjct: 4 SSLLNELIEAFRCLPGVGPKSAQRMAFHALERERGRAKHLALVLQQAVERIGHCQRCRNF 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 C++C +RD SV+ +VE AD+ ALE + N LY VL G LSPLD IGP+DIG Sbjct: 64 TENAVCSLCESPRRDGSVLCIVESPADVSALEDATDYNGLYFVLMGRLSPLDGIGPKDIG 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L +R+ +RELI A + T+EG+ TAHYI + V ++R+A+G+P+G EL+Y+ Sbjct: 124 LDQLEQRLSDGSVRELILATNPTVEGEATAHYISELAAEAKVAVSRIAHGVPLGGELEYI 183 Query: 187 DDGTIFEAIRSRTVL 201 D GT+ A R L Sbjct: 184 DGGTLSHAFSQRLRL 198 >gi|153806693|ref|ZP_01959361.1| hypothetical protein BACCAC_00964 [Bacteroides caccae ATCC 43185] gi|149131370|gb|EDM22576.1| hypothetical protein BACCAC_00964 [Bacteroides caccae ATCC 43185] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSVLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTEICQICANPQRDASTICVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVQRVSEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|284049058|ref|YP_003399397.1| recombination protein RecR [Acidaminococcus fermentans DSM 20731] gi|283953279|gb|ADB48082.1| recombination protein RecR [Acidaminococcus fermentans DSM 20731] Length = 198 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 126/194 (64%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K + L + L R+PG G +SA R H++ K + + LA A+ ++ + V LC C ++ Sbjct: 5 KPLARLHEQLRRLPGIGSKSALRLAYHVLDMKREDVEELARALLDVKDHVHLCRQCFDLC 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D++RD S++ VVE D+ A+ER++ LYHVL G LSPLD +GP+ + I Sbjct: 65 EGELCEICQDEKRDRSLVCVVEQPQDVAAMERTRGYQGLYHVLHGVLSPLDGVGPDQLKI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R++ ++E+I A ++ +EG+ TA+Y+ ++ +K++R+A+G+P+G +L+Y D Sbjct: 125 RELLLRLQKGTVKEVIIATNSDVEGEATANYLAGLIRPTGIKVSRIAHGLPVGGDLEYAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+++A+ +R + Sbjct: 185 ELTLYKALENRREI 198 >gi|29346491|ref|NP_809994.1| recombination protein RecR [Bacteroides thetaiotaomicron VPI-5482] gi|253568105|ref|ZP_04845516.1| recombination protein recR [Bacteroides sp. 1_1_6] gi|298387732|ref|ZP_06997283.1| recombination protein RecR [Bacteroides sp. 1_1_14] gi|73621464|sp|Q8A8T6|RECR_BACTN RecName: Full=Recombination protein recR gi|29338387|gb|AAO76188.1| recombination protein recR [Bacteroides thetaiotaomicron VPI-5482] gi|251842178|gb|EES70258.1| recombination protein recR [Bacteroides sp. 1_1_6] gi|298259588|gb|EFI02461.1| recombination protein RecR [Bacteroides sp. 1_1_14] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 125/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSVLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVQRVSEGGIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEITLGRSIVNRT 199 >gi|163789944|ref|ZP_02184380.1| recombination protein RecR [Carnobacterium sp. AT7] gi|159874884|gb|EDP68952.1| recombination protein RecR [Carnobacterium sp. AT7] Length = 198 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 123/196 (62%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG G ++A R + +E+ + A+A+ + + CSICG Sbjct: 3 YPEPISKLMDSYMKLPGIGAKTAARLAFFTIDMREEDVTDFAKALISAKRDLHYCSICGQ 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S+++VVED D+ ALE+ + + +YHVL G LSP++ GPEDI Sbjct: 63 ITEDDPCQICQDKSRDRSIVLVVEDPKDVMALEKMREYHGVYHVLHGVLSPIEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R++ +I E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIPSLIKRLQSDEINEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEITLLKAVEGRREL 198 >gi|237749100|ref|ZP_04579580.1| recombinational DNA repair protein [Oxalobacter formigenes OXCC13] gi|229380462|gb|EEO30553.1| recombinational DNA repair protein [Oxalobacter formigenes OXCC13] Length = 198 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 113/192 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI+ +PG GP+SA+R HL++ L+ A+AN + V C C Sbjct: 6 SLQQLIEAFRHLPGIGPKSAQRMAYHLLQHDRDGAQQLSVALANAISSVRHCERCNTFTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 ++ C +C DQ+RDAS++ + E AD +E++ Y VL GSLSPLD IGP++I Sbjct: 66 SEVCEMCSDQERDASLLCITETPADQMMIEQTLTFKGYYFVLMGSLSPLDGIGPKEIHFD 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI+R ++E++ A S EG+ TAHYI + LK ++++RLA G+P+G+EL+Y+D Sbjct: 126 KLIKRATDGIVKEVVLATSFNNEGEATAHYISEMLKVRGIRVSRLARGVPVGAELEYVDV 185 Query: 189 GTIFEAIRSRTV 200 GTI A R Sbjct: 186 GTIARAFLDRRS 197 >gi|113461451|ref|YP_719520.1| recombination protein RecR [Haemophilus somnus 129PT] gi|123132215|sp|Q0I4S5|RECR_HAES1 RecName: Full=Recombination protein recR gi|112823494|gb|ABI25583.1| DNA replication and repair protein RecR [Haemophilus somnus 129PT] Length = 201 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +ENLI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C Sbjct: 3 SSPLLENLIEHLRCLPGVGPKSAQRMAYHLLQRDRSGGMNLAGALTEAMSKIGHCTHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC + +R S + VVE +D+ A+E++ + Y VL G LSPLD IGP++ Sbjct: 63 FTEEESCAICNNPRRQNSGFLCVVEQPSDIPAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + E+I A + T+EG+ TA+YI + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLQHESFYEVILATNPTVEGEATANYIAEMCFQHNIKVSRIAHGIPIGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 TVDGTTLSHSLIGRREI 199 >gi|317476230|ref|ZP_07935481.1| recombination protein RecR [Bacteroides eggerthii 1_2_48FAA] gi|316907641|gb|EFV29344.1| recombination protein RecR [Bacteroides eggerthii 1_2_48FAA] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 128/200 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFPSILLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRD+SVI VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCYNISDTETCRICSNPQRDSSVICVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E++FA+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLEIESLVQRVAAGGIKEVVFALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRTP 200 >gi|90962201|ref|YP_536117.1| recombination protein RecR [Lactobacillus salivarius UCC118] gi|227891206|ref|ZP_04009011.1| recombination protein [Lactobacillus salivarius ATCC 11741] gi|301300449|ref|ZP_07206649.1| recombination protein RecR [Lactobacillus salivarius ACS-116-V-Col5a] gi|122448749|sp|Q1WSU5|RECR_LACS1 RecName: Full=Recombination protein recR gi|90821395|gb|ABE00034.1| Recombination protein [Lactobacillus salivarius UCC118] gi|227867080|gb|EEJ74501.1| recombination protein [Lactobacillus salivarius ATCC 11741] gi|300214870|gb|ADJ79286.1| Recombination protein recR [Lactobacillus salivarius CECT 5713] gi|300851946|gb|EFK79630.1| recombination protein RecR [Lactobacillus salivarius ACS-116-V-Col5a] Length = 199 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + +E + A+++ + + CSICGN Sbjct: 3 YPEPISKLIDSYMKLPGIGSKTATRLAFYTIDMQEDDVTEFAQSLISAKRDLSYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D+ RD S ++VVE D+ +LER + LYHVL G LSP++ GPEDI Sbjct: 63 ITESDPCMICADKSRDNSKVVVVEQPKDVMSLERMNEYHGLYHVLHGVLSPIEGKGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL+ R++ + I+E+I A +AT EG+ TA YI +K ++K+TRLA+G+ +GS+++ Sbjct: 123 NIASLLRRLQKNEAIKEVIIATNATPEGEATAMYIARLVKPANIKVTRLAHGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+AI R + Sbjct: 183 YADEMTLFKAIEGRQEI 199 >gi|145630380|ref|ZP_01786161.1| recombination protein RecR [Haemophilus influenzae R3021] gi|144984115|gb|EDJ91552.1| recombination protein RecR [Haemophilus influenzae R3021] Length = 200 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+LI+ L +PG GP+SA+R HL+++ LA A+ +++ CS C + Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSRIGHCSQCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCHQHNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRQI 199 >gi|78042767|ref|YP_361462.1| recombination protein RecR [Carboxydothermus hydrogenoformans Z-2901] gi|123575269|sp|Q3A8S2|RECR_CARHZ RecName: Full=Recombination protein recR gi|77994882|gb|ABB13781.1| recombination protein RecR [Carboxydothermus hydrogenoformans Z-2901] Length = 199 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 131/197 (66%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI+ LA++PG GP++A++ L+L++ E+ LAEA+ CSIC Sbjct: 2 YFAEPVAKLIEHLAKLPGIGPKTAQKLALYLLEIPEEEARALAEAIITARKNTRYCSICF 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TDPCAIC + R+ +++VVE+ D+ A+ER+ + N +YHVL G LSP+ IGPED Sbjct: 62 NLTDTDPCAICRNPGRNHRLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPED 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ R+ + + E+I A + T+EG+ TA Y+ LK ++ K+TR+A+G+P+GS+++ Sbjct: 122 LKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRIAHGLPVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ TI +A+ R VL Sbjct: 182 YADELTIRKALEGRRVL 198 >gi|228478357|ref|ZP_04062965.1| recombination protein RecR [Streptococcus salivarius SK126] gi|228250036|gb|EEK09306.1| recombination protein RecR [Streptococcus salivarius SK126] Length = 198 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D Sbjct: 62 RLTDDDPCNICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVDEIIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|300087578|ref|YP_003758100.1| recombination protein RecR [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527311|gb|ADJ25779.1| recombination protein RecR [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 203 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 2/202 (0%) Query: 1 MQK--KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 M++ K T + L ++L R+PG GP+SA+R + H++K + + LA+A+ + + Sbjct: 1 MKEAPKSTAAAVNRLTEVLGRLPGIGPKSAQRLSYHILKASAEQVRELADALVCVKQQTR 60 Query: 59 LCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118 LC C N+ D C+IC +RD S I VVE D+ LE + YHVL G++SP + Sbjct: 61 LCRTCWNIADGDTCSICASPERDTSRICVVEQPQDMLTLEHTGIYKGGYHVLHGAISPSE 120 Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 +G DI + L+ R+E + E+I A +A +EG+TTA Y+ + + +++TRLA G+P Sbjct: 121 GVGTADIRLAELMSRLESGMVTEVIVATNANVEGETTAMYLQRLIAPLGIRVTRLARGLP 180 Query: 179 MGSELDYLDDGTIFEAIRSRTV 200 G E++Y DD T+ A+ +R Sbjct: 181 FGGEIEYADDVTLSRALENRQE 202 >gi|170742369|ref|YP_001771024.1| recombination protein RecR [Methylobacterium sp. 4-46] gi|238688006|sp|B0UP43|RECR_METS4 RecName: Full=Recombination protein recR gi|168196643|gb|ACA18590.1| recombination protein RecR [Methylobacterium sp. 4-46] Length = 201 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 118/199 (59%), Positives = 152/199 (76%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI++LAR+PG GPRSARRA L L+KK++ LLGPLAEAM ++ C Sbjct: 1 MPQAVAGPEIERLIQLLARMPGLGPRSARRAALQLIKKRDTLLGPLAEAMRVASERIVTC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNVDT DPC IC D RD S+++VVEDV+DLWALERS AV A YHVLGG LS LD I Sbjct: 61 RECGNVDTCDPCTICRDHGRDPSMLVVVEDVSDLWALERSGAVTARYHVLGGILSALDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PE++ + L+ER V ++RE+I A+SAT++GQTTAHY+ + L + VK+T+LA+G+P+G Sbjct: 121 RPENLNLARLVERASVPEMREIILALSATVDGQTTAHYVTELLAHLPVKVTKLAHGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLD+GT+ AIR RT Sbjct: 181 GELDYLDEGTLSAAIRQRT 199 >gi|325579175|ref|ZP_08149131.1| recombination protein R [Haemophilus parainfluenzae ATCC 33392] gi|301155602|emb|CBW15070.1| gap repair protein [Haemophilus parainfluenzae T3T1] gi|325159410|gb|EGC71544.1| recombination protein R [Haemophilus parainfluenzae ATCC 33392] Length = 200 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ CS C + Sbjct: 3 SSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R S ++ VVE AD+ A+E++ + Y VL G LSPLD IGP++ Sbjct: 63 FTEEETCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + E+I A + T+EG TA+YI + ++K++R+A+GIP+G EL+ Sbjct: 123 IGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEICHQHNIKVSRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLTHSFLGRRQI 199 >gi|50903606|gb|AAT87321.1| RecR [Streptococcus pyogenes MGAS10394] Length = 228 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 32 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 91 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 92 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 151 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 152 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 211 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 212 YADEVTLLRAIENRTEL 228 >gi|332829165|gb|EGK01829.1| recombination protein recR [Dysgonomonas gadei ATCC BAA-286] Length = 207 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 126/199 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +K +EN + AR+PG G ++A R LHL+++ + ++ A+++ + ++V C Sbjct: 1 MNQKYPSILLENAVNEFARLPGIGRKTALRLILHLLRQDDAMVDGFAQSLVALKHEVRYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ + C IC D+ RDA+ I VVE++ ++ A+E + YHVLGG +SP+D I Sbjct: 61 KVCHNISDAEVCPICQDKSRDATTICVVENIKEVMAIENTMQFRGQYHVLGGIISPIDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ER+ I E+I A+S T+EG TT YI KL DVK++ +A GI +G Sbjct: 121 GPADLEIESLVERVSQGNINEIILALSTTMEGDTTNFYIYKKLAPYDVKVSMIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEVTLGRSILNRT 199 >gi|254304296|ref|ZP_04971654.1| recombination protein R [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324488|gb|EDK89738.1| recombination protein R [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 197 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 115/197 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C IC D R+ ++I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCNICSDNARNHNIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRIEI 197 >gi|260170498|ref|ZP_05756910.1| recombination protein RecR [Bacteroides sp. D2] gi|315918842|ref|ZP_07915082.1| recombination protein recR [Bacteroides sp. D2] gi|313692717|gb|EFS29552.1| recombination protein recR [Bacteroides sp. D2] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSVITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPIDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVQRVTEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|194336273|ref|YP_002018067.1| recombination protein RecR [Pelodictyon phaeoclathratiforme BU-1] gi|229470331|sp|B4SGN7|RECR_PELPB RecName: Full=Recombination protein recR gi|194308750|gb|ACF43450.1| recombination protein RecR [Pelodictyon phaeoclathratiforme BU-1] Length = 204 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 127/202 (62%), Gaps = 5/202 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T +E+LI A++PG G ++A+R ++++++ LAEA+ + V CS+ Sbjct: 1 MRYTSAALESLIDEFAKLPGVGRKTAQRLAMYILREPRAEAERLAEALLEAKDNVIRCSV 60 Query: 63 CGNVDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ DPCA+C + RD SVI VVE D+ A E++ LYHVL G +SPLD I Sbjct: 61 CQNITDVGVDPCALCTSKARDRSVICVVESPVDMLAFEKTGHYKGLYHVLHGVISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKI---RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI ++ L+ R + + RE++ A++ TIEG+TTA Y+ LK + + +T++A GI Sbjct: 121 GPDDIKVRELLLRFTMPQSPAVREVVLALNPTIEGETTALYLSKLLKPLGIHVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 P+G+EL+++D+ T+ A+ RT Sbjct: 181 PVGAELEFIDEATLSRAMEGRT 202 >gi|282859499|ref|ZP_06268604.1| recombination protein RecR [Prevotella bivia JCVIHMP010] gi|282587727|gb|EFB92927.1| recombination protein RecR [Prevotella bivia JCVIHMP010] Length = 202 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 128/199 (64%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ +E + +++PG G ++A R LHL+++ + + AM + + + C Sbjct: 1 MQQYPSLLLEKAVNEFSQLPGIGRKTALRLVLHLLRQSTTQVDDFSNAMVEMKHNIKHCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ TD C IC D +RD +V+ VVE++ D+ A+E ++ N LYHVLGG +SP+D IG Sbjct: 61 VCHNISDTDICPICSDARRDTTVVCVVENIQDVMAIENTQQFNGLYHVLGGIISPMDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I+SL+ER+ +I+E+I A+++T+EG TT YI KLK DVK++ +A GI +G Sbjct: 121 PNDLEIESLVERVRSGEIKEIILALASTMEGDTTNFYISRKLKEFDVKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSIINRTP 199 >gi|258647975|ref|ZP_05735444.1| recombination protein RecR [Prevotella tannerae ATCC 51259] gi|260851816|gb|EEX71685.1| recombination protein RecR [Prevotella tannerae ATCC 51259] Length = 203 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 126/201 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ K +E + ++PG G R+A R LHL+K+ + + AE++ + K+ C Sbjct: 1 MNEQYPSKHLERALNEFTKLPGIGRRTALRLVLHLLKQDKAYVNSFAESLIAVKEKIHYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +IC N+ TD C IC RD SV+ VVE+++ + ++E + A LYHVLGG +SP+D + Sbjct: 61 NICHNISDTDICEICASPLRDQSVVCVVENISGVLSIENTGAFRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SLI+R+ +++E+IFA++ T+EG TT +I KL +VK+T LA G+ +G Sbjct: 121 GPSDLEIDSLIDRVASGEVKEIIFALNPTMEGDTTIFFIQRKLAQYNVKLTTLARGVSVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y D+ T+ +I R + Sbjct: 181 EELEYTDEITLGRSITERIEI 201 >gi|260912246|ref|ZP_05918798.1| recombination protein R [Prevotella sp. oral taxon 472 str. F0295] gi|260633680|gb|EEX51818.1| recombination protein R [Prevotella sp. oral taxon 472 str. F0295] Length = 204 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 127/201 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+++ +E + +R+PG G ++A R LHL+K + + + + ++ + + C Sbjct: 1 MEQQYPSALLEKAVSEFSRLPGIGRKTALRLVLHLLKTRVEDVESFSSSILKVRKDIKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ CAIC + +RDA+ I VVE++ D+ A+E ++ N LYHVLGG +SP+D + Sbjct: 61 QLCHNISDTETCAICANPRRDAATICVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I SL+ER+ + E+I A+S+T+EG TT +YI K+ VK + +A GI +G Sbjct: 121 GPNDIEINSLVERVANGGVNEVILALSSTMEGDTTNYYISRKIAPYKVKTSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 E++Y D+ T+ +I +RT + Sbjct: 181 DEIEYTDEVTLGRSILNRTSI 201 >gi|270291182|ref|ZP_06197405.1| recombination protein RecR [Pediococcus acidilactici 7_4] gi|304385467|ref|ZP_07367812.1| recombination protein R [Pediococcus acidilactici DSM 20284] gi|270280578|gb|EFA26413.1| recombination protein RecR [Pediococcus acidilactici 7_4] gi|304328674|gb|EFL95895.1| recombination protein R [Pediococcus acidilactici DSM 20284] Length = 199 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + ++ + A+A+ + + CSICGN Sbjct: 3 YPEPIAKLIDSFMKLPGIGYKTATRLAFFTLDMQKDDVTDFAKALISAQRDLRFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD ++VVED D+ ++E+ K + LYHVL G LSP+D GPEDI Sbjct: 63 ITEDDPCDICQDASRDQKTVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL+ R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIASLLTRLQKNEAIKEVIIATNATPEGEATAMYISRLIKPSGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+++A+ RT + Sbjct: 183 YADQMTLYKAVEGRTEM 199 >gi|253996276|ref|YP_003048340.1| recombination protein RecR [Methylotenera mobilis JLW8] gi|253982955|gb|ACT47813.1| recombination protein RecR [Methylotenera mobilis JLW8] Length = 200 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 3/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ +E LI L +PG GP+SA+R +L+++ Q LA A+ N V C Sbjct: 1 MKN---PPALEQLIDSLRCLPGVGPKSAQRMAYYLLQRDRQGANGLALALNNALQVVDHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C C +C QRD +V+ VVE DL LE ++A + +Y VL G LSPLD I Sbjct: 58 KLCNTFSEQPICPLCESAQRDKTVLCVVEMPTDLIMLENTRAYSGMYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I + LI+R + E+I A + T+EG TAHYI + L+ +K++R+A G+PMG Sbjct: 118 GPKEIHLDRLIKRANDGVVTEVILATNYTVEGDATAHYISELLRARGIKVSRIARGMPMG 177 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y+D GT+ +A+ R Sbjct: 178 GEIEYVDTGTLAQAMLERRS 197 >gi|254421279|ref|ZP_05034997.1| recombination protein RecR [Synechococcus sp. PCC 7335] gi|196188768|gb|EDX83732.1| recombination protein RecR [Synechococcus sp. PCC 7335] Length = 190 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ R+PG GP+SA+R +H++K+ E + LA A+ + N+V CS C ++ C Sbjct: 2 IEEFQRLPGIGPKSAQRLAMHMLKRPEAEVRALANALIDAKNQVGQCSQCFHLSAEPVCN 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC Q RD + I VV + D+ ALE+++ YHVLGG +SP+D IGPE + + L+ R Sbjct: 62 ICRSQSRDRNTICVVAESKDVIALEKTREYKGRYHVLGGLISPMDGIGPEQLNVGQLVHR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + + I E I AIS +IEG TT Y+ LK K+TR+A+G+PMG +L+Y D+ T+ Sbjct: 122 VNREGISEAILAISPSIEGDTTTLYVGQLLKPF-TKVTRIAFGLPMGGDLEYADEVTLAR 180 Query: 194 AIRSRTVL 201 A+ R L Sbjct: 181 ALEGRREL 188 >gi|89892859|ref|YP_516346.1| hypothetical protein DSY0113 [Desulfitobacterium hafniense Y51] gi|122484179|sp|Q251Z0|RECR_DESHY RecName: Full=Recombination protein recR gi|89332307|dbj|BAE81902.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 198 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 126/201 (62%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + +LI L+R+PG GP++A R +L+++ Q+ LAE M ++ C Sbjct: 1 MDFLNYPEPLADLITGLSRLPGIGPKTAGRLAFYLLQQP-QVAENLAETMIRAQREIRQC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N DPC IC ++R+ +++ +VE D+ +LE+++ LYHVL G +SPL+ + Sbjct: 60 SLCCNYTDHDPCPICTGEKRERTLLCIVEQPRDVVSLEKTREFKGLYHVLHGVISPLEGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I L+ R+ + ++E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G Sbjct: 120 GPEQLTISKLLGRL--EGVQEVVMAMNPTVEGEATALYLSRLLKPLGIKVTRIAHGLPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ TI A+ R + Sbjct: 178 GDLEYADEITIARALEGRRQI 198 >gi|55820693|ref|YP_139135.1| recombination protein RecR [Streptococcus thermophilus LMG 18311] gi|55822584|ref|YP_141025.1| recombination protein RecR [Streptococcus thermophilus CNRZ1066] gi|3024524|sp|P96053|RECR_STRTR RecName: Full=Recombination protein recR gi|73621520|sp|Q5M0P4|RECR_STRT1 RecName: Full=Recombination protein recR gi|73621521|sp|Q5M580|RECR_STRT2 RecName: Full=Recombination protein recR gi|1685113|gb|AAC44615.1| RecM [Streptococcus thermophilus] gi|55736678|gb|AAV60320.1| recombination protein [Streptococcus thermophilus LMG 18311] gi|55738569|gb|AAV62210.1| recombination protein [Streptococcus thermophilus CNRZ1066] Length = 198 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D Sbjct: 62 RLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|219666122|ref|YP_002456557.1| recombination protein RecR [Desulfitobacterium hafniense DCB-2] gi|254790765|sp|B8FY16|RECR_DESHD RecName: Full=Recombination protein recR gi|219536382|gb|ACL18121.1| recombination protein RecR [Desulfitobacterium hafniense DCB-2] Length = 198 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 127/201 (63%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + +LI L+R+PG GP++A R +L+++ Q+ LAEAM ++ C Sbjct: 1 MDFLNYPEPLADLITGLSRLPGIGPKTAGRLAFYLLQQP-QVAENLAEAMIRAQREIRQC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N DPC IC ++R+ +++ +VE D+ +LE+++ LYHVL G +SPL+ + Sbjct: 60 SLCCNYTDHDPCPICTGEKRERTLLCIVEQPRDVVSLEKTREFKGLYHVLHGVISPLEGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I L+ R+ + ++E++ A++ T+EG+ TA Y+ LK + +K+TR+A+G+P+G Sbjct: 120 GPEQLTISKLLGRL--EGVQEVVMAMNPTVEGEATALYLSRLLKPLGIKVTRIAHGLPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ TI A+ R + Sbjct: 178 GDLEYADEITIARALEGRRQI 198 >gi|15828252|ref|NP_302515.1| recombination protein RecR [Mycobacterium leprae TN] gi|221230729|ref|YP_002504145.1| recombination protein RecR [Mycobacterium leprae Br4923] gi|6093948|sp|O69520|RECR_MYCLE RecName: Full=Recombination protein recR gi|3150109|emb|CAA19161.1| recombination protein RecR [Mycobacterium leprae] gi|13093945|emb|CAC31845.1| DNA repair protein [Mycobacterium leprae] gi|219933836|emb|CAR72427.1| DNA repair protein [Mycobacterium leprae Br4923] Length = 203 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 121/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI L ++PG GP+SA+R HL+ + Q + L + + + V C++CG Sbjct: 1 MFEGPVQNLIDELGKLPGIGPKSAQRIAFHLLSVEPQDIDRLTAVLVKVRDDVRFCTVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDASV+ VVE+ D+ A+ER++ YHVLGG+L PL IGPE Sbjct: 61 NVSDDERCRICSDTRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVGITEVIIATDPNTEGEATATYLVRMLRDMPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALTGRRTM 202 >gi|254514490|ref|ZP_05126551.1| recombination protein RecR [gamma proteobacterium NOR5-3] gi|219676733|gb|EED33098.1| recombination protein RecR [gamma proteobacterium NOR5-3] Length = 202 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 115/195 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R LHL+++ + L+ ++A+ +V C C N Sbjct: 4 FSPAMDALIEGLRCLPGVGPKSAQRMALHLLERNREGALTLSRSLADAVERVGRCQQCRN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC D RD +++ +VE D+ A+E++ Y VL G LSP+D IGPE+I Sbjct: 64 LAEAVLCGICSDTGRDPTLLCIVETPGDILAIEQAGGYRGRYFVLMGHLSPIDGIGPEEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +++E+I A + T+EG+ TA+YI L+ + +++R+A+G+P+G EL+Y Sbjct: 124 GLPILEALARDGEVQEVILATNPTVEGEATAYYITRMLEPLIPRLSRIAHGVPLGGELEY 183 Query: 186 LDDGTIFEAIRSRTV 200 +D T+ A R Sbjct: 184 VDGSTLAHAFSGRQP 198 >gi|127513161|ref|YP_001094358.1| recombination protein RecR [Shewanella loihica PV-4] gi|166221964|sp|A3QF51|RECR_SHELP RecName: Full=Recombination protein recR gi|126638456|gb|ABO24099.1| recombination protein RecR [Shewanella loihica PV-4] Length = 199 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA+A+++ + V CS C Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGHKLAQALSSAMSDVGHCSSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R S +I VVE AD+ A+E + Y VL G LSPLD +GP++ Sbjct: 63 FTEESLCPICASSRRGNSDLICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + ++ ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+ Sbjct: 123 LGLSLLETHLASGEVSELILATNPTVEGDATAHFIADMAKQHEVNVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRIPL 199 >gi|116627502|ref|YP_820121.1| recombination protein RecR [Streptococcus thermophilus LMD-9] gi|122267900|sp|Q03LJ7|RECR_STRTD RecName: Full=Recombination protein recR gi|116100779|gb|ABJ65925.1| DNA replication and repair protein RecR [Streptococcus thermophilus LMD-9] Length = 198 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D Sbjct: 62 RLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLIARLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|172046636|sp|Q3AJ44|RECR_SYNSC RecName: Full=Recombination protein recR Length = 191 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 116/189 (61%), Gaps = 1/189 (0%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 LI R+PG GPR+A+R LHL+ + ++ + A+A+ +V C C ++ Sbjct: 3 RLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFHLSADPE 62 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC + +R VI VV D DL ALER++ + YHVLGG +SP+D IGPE + + L+ Sbjct: 63 CEICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELV 122 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +RI ++I E+I A++ ++EG TT+ Y+ LK ++R+AYG+PMGSEL+Y D+ T+ Sbjct: 123 QRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFC-SVSRIAYGLPMGSELEYADEVTL 181 Query: 192 FEAIRSRTV 200 A+ R Sbjct: 182 SRALEGRRP 190 >gi|331265935|ref|YP_004325565.1| recombination protein RecR [Streptococcus oralis Uo5] gi|326682607|emb|CBZ00224.1| recombination protein RecR [Streptococcus oralis Uo5] Length = 198 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYISRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|237716337|ref|ZP_04546818.1| recombination protein recR [Bacteroides sp. D1] gi|229443984|gb|EEO49775.1| recombination protein recR [Bacteroides sp. D1] Length = 220 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 16 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 75 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 76 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 135 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 136 GPNDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISVG 195 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 196 DELEYADEVTLGRSIVNRT 214 >gi|254464756|ref|ZP_05078167.1| recombination protein RecR [Rhodobacterales bacterium Y4I] gi|206685664|gb|EDZ46146.1| recombination protein RecR [Rhodobacterales bacterium Y4I] Length = 199 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 105/201 (52%), Positives = 143/201 (71%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + EIE+LI ++A++PG GPRSARRA LHL++K+ LL PLA+ M+ + C Sbjct: 1 MIKN-SNSEIEDLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLADVMSEVAATAREC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN TT+ C IC D++R + VVEDVADLWA+ER+ YHVLGG+LS LD + Sbjct: 60 LNCGNAGTTEICPICTDERRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G VK+T LA G+P+G Sbjct: 120 GPEDLRIPRLVDRVATEGVSEVILALNATIDGQTTAHYIADQLQG-QVKLTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGTI A+ +R + Sbjct: 179 GELDYLDDGTISAALSARKEI 199 >gi|288928336|ref|ZP_06422183.1| recombination protein RecR [Prevotella sp. oral taxon 317 str. F0108] gi|288331170|gb|EFC69754.1| recombination protein RecR [Prevotella sp. oral taxon 317 str. F0108] Length = 204 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 127/201 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+++ +E + +R+PG G ++A R LHL+K + + + + ++ + + C Sbjct: 1 MEQQYPSALLEKAVAEFSRLPGIGRKTALRLVLHLLKTRVEDVENFSSSILKVRKDIKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ CAIC + +RDA+ I VVE++ D+ A+E ++ N LYHVLGG +SP+D + Sbjct: 61 QLCHNISDTETCAICANPRRDAATICVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP DI I SL+ER+ + E+I A+S+T+EG TT +YI K+ VK + +A GI +G Sbjct: 121 GPNDIEINSLVERVAKGGVNEVILALSSTMEGDTTNYYISRKIAPYKVKTSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 E++Y D+ T+ +I +RT + Sbjct: 181 DEIEYTDEVTLGRSIINRTSI 201 >gi|116750217|ref|YP_846904.1| recombination protein RecR [Syntrophobacter fumaroxidans MPOB] gi|171460802|sp|A0LM17|RECR_SYNFM RecName: Full=Recombination protein recR gi|116699281|gb|ABK18469.1| DNA replication and repair protein RecR [Syntrophobacter fumaroxidans MPOB] Length = 201 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 123/199 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +LI+ L+++PG G +SA R +HL+K LA+A+ + +++ C Sbjct: 1 MVSSGYPPIMNDLIRRLSKLPGLGEKSATRIAMHLLKMSRTDAESLADAIRELRSRIRTC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C + + C+IC D RD I VVE ADL A+E+S A YHVL G L+PLD + Sbjct: 61 SRCFHFTDAEECSICADPARDTGEICVVETTADLLAIEQSGAYRGRYHVLQGVLAPLDAV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ I+ L+ERI+ + RE+I A + + EG+ TAHY++ LK +V+++R+AYGIPMG Sbjct: 121 GPDDLRIRELLERIDREGAREVIIATNPSSEGEATAHYLLKLLKDRNVRVSRIAYGIPMG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L Y D T+ A++ R Sbjct: 181 GDLKYTDRFTLERALKGRQ 199 >gi|94994663|ref|YP_602761.1| recombination protein RecR [Streptococcus pyogenes MGAS10750] gi|94548171|gb|ABF38217.1| Recombination protein recR [Streptococcus pyogenes MGAS10750] Length = 231 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 35 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICG 94 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D RD + I+VVED D+ A+E+ + + YHVL G +SP++ +GP+D Sbjct: 95 NLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDD 154 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 155 INLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 214 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 215 YADEVTLLRAIENRTEL 231 >gi|77917991|ref|YP_355806.1| recombination protein RecR [Pelobacter carbinolicus DSM 2380] gi|123574983|sp|Q3A7K8|RECR_PELCD RecName: Full=Recombination protein recR gi|77544074|gb|ABA87636.1| DNA replication and repair protein RecR [Pelobacter carbinolicus DSM 2380] Length = 199 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 119/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 L+ A++PG G ++A R TL ++++ Q L EA+ + + CS C Sbjct: 4 FTPSFNRLVGEFAKLPGIGRKTAVRLTLFMLRQTSQDALALGEAVRELKERTRFCSRCFY 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 DPC +C D RD +I VVE+ D+ A+ERS++ YHVL GSLSPLD IGP+D+ Sbjct: 64 FTEEDPCPLCTDVGRDDQLICVVEEPQDVIAIERSRSFRGRYHVLHGSLSPLDGIGPDDL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ER++ ++E++ A + +EG+ TA Y+ ++ VK+TRLA+GIP GS+L+Y Sbjct: 124 KIDALLERLQQNNVKEVLLATNFDVEGEATALYLAKVIQPFGVKVTRLAHGIPTGSDLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ R L Sbjct: 184 VDEATVNHAVEGRREL 199 >gi|21673635|ref|NP_661700.1| recombination/replication protein RecR [Chlorobium tepidum TLS] gi|25091147|sp|Q8KE84|RECR_CHLTE RecName: Full=Recombination protein recR gi|21646751|gb|AAM72042.1| recombination/replication protein RecR [Chlorobium tepidum TLS] Length = 204 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 129/204 (63%), Gaps = 5/204 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + +E LI+ A++PG G ++A+R T+H++ ++ + LA A+ ++ KV CS+ Sbjct: 1 MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLHERRSEVEKLASALIDVKEKVIRCSV 60 Query: 63 CGNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ DPC IC RD SVI VVE ++ A E++ LYHVL G +SPLD + Sbjct: 61 CQNITDLGVDPCHICTSAGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKI---RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI ++ LI RI V RE++ A++ T+EG+TT+ YI LK + + +TR+A GI Sbjct: 121 GPDDIKVRELIARIGVDSTGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G+EL+++D+ T+ A+ R+ + Sbjct: 181 PVGAELEFIDEATLSRAMEGRSAI 204 >gi|269216236|ref|ZP_06160090.1| recombination protein RecR [Slackia exigua ATCC 700122] gi|269130495|gb|EEZ61573.1| recombination protein RecR [Slackia exigua ATCC 700122] Length = 198 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 117/194 (60%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 I+ L+ L R+PG GP+SA+R ++ LA+A+ ++ + V C C N Sbjct: 5 PAIQTLLDELERMPGVGPKSAQRIAYWILNSDRATAERLAQAVLDVKSSVHFCPRCFNYA 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC RDA I VV + D+ A+ER+ LYHVLGG+LSP+D IGP+D+ + Sbjct: 65 QGDVCDICGSANRDAHTICVVSEPRDIAAIERTAVYKGLYHVLGGALSPMDGIGPDDLKV 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L+ R+ V+ + E++ A + +EG+TTA Y+ +K + ++++RLA G+P+G +L++ D Sbjct: 125 AELMARLAVEDVTEVLIATNPDVEGETTATYLARLIKPLGIEVSRLASGLPVGGDLEFAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+ AI +R L Sbjct: 185 EVTLGRAIEARRAL 198 >gi|329117044|ref|ZP_08245761.1| recombination protein RecR [Streptococcus parauberis NCFD 2020] gi|326907449|gb|EGE54363.1| recombination protein RecR [Streptococcus parauberis NCFD 2020] Length = 198 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDEDVNDFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D R+ +I+VVE+ D+ A+E+ + + LYHVL G +SP++ +GP++ Sbjct: 62 NLTDDDPCGICTDPNRNQEIILVVEESKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDN 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++ LI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKPLITRLMDGKVNEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|215432694|ref|ZP_03430613.1| recombination protein RecR [Mycobacterium tuberculosis EAS054] gi|289755846|ref|ZP_06515224.1| recombination protein recr [Mycobacterium tuberculosis EAS054] gi|289696433|gb|EFD63862.1| recombination protein recr [Mycobacterium tuberculosis EAS054] Length = 203 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTSVLAKVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R VL Sbjct: 181 GGDLEFADELTLGRALAGRRVL 202 >gi|78187144|ref|YP_375187.1| recombination protein RecR [Chlorobium luteolum DSM 273] gi|123582928|sp|Q3B3D7|RECR_PELLD RecName: Full=Recombination protein recR gi|78167046|gb|ABB24144.1| RecR protein [Chlorobium luteolum DSM 273] Length = 204 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 130/202 (64%), Gaps = 5/202 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + IE LI +R+PG G ++ARR ++++++ LA A+ ++ ++V CS+ Sbjct: 1 MQYSSSSIEALIDAFSRLPGVGRKTARRLAMYVLQQPRLEAERLARALIDVKDRVIRCSV 60 Query: 63 CGNVD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV DPC+IC Q RD +VI VVE D+ A E++ LYHVL G +SPLD + Sbjct: 61 CQNVTDREEDPCSICTSQGRDRTVICVVESPVDVLAFEKTGHYRGLYHVLHGVISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKI---RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI I+ L+ R+ + I RE++ A++ TIEG+TT+ Y+ LK + V++T++A GI Sbjct: 121 GPDDIKIRELLGRLSPEGIGGVREIVLALNPTIEGETTSLYLSRLLKPLGVEVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 P+G+EL+++D+ T+ A+ R+ Sbjct: 181 PVGAELEFIDEATLSRAMEGRS 202 >gi|325298171|ref|YP_004258088.1| Recombination protein recR [Bacteroides salanitronis DSM 18170] gi|324317724|gb|ADY35615.1| Recombination protein recR [Bacteroides salanitronis DSM 18170] Length = 206 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 125/198 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R L+L+++ Q + A+ + ++V C Sbjct: 1 MNQQYPSALLEKAVDEFAKLPGIGRKTAMRLVLYLLRQDTQAVESFGNALIRLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC + RDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTDVCQICSNPSRDASTICVVENIRDVMAIENTQQYRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ER++ + E+I A+S+T+EG TT YI KL +VK+T +A GI +G Sbjct: 121 GPSDLQIESLVERVKAGTVSEVILALSSTMEGDTTNFYIFRKLAPYNVKLTIIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSR 198 EL+Y D+ T+ +I +R Sbjct: 181 DELEYTDEVTLGRSIANR 198 >gi|288918921|ref|ZP_06413264.1| recombination protein RecR [Frankia sp. EUN1f] gi|288349673|gb|EFC83907.1| recombination protein RecR [Frankia sp. EUN1f] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 115/195 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++++I L ++PG GP+SA+R HL+ + L A+ + KV C C Sbjct: 1 MYEGVVQDVIDELGQLPGIGPKSAQRIAFHLLAADPADVRRLVSALTELKEKVQFCRTCF 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV ++ C IC+D +RD + I VVE+ D+ A+ER++ YHVLGG+++P+ +GP+D Sbjct: 61 NVAQSELCRICVDPRRDQTSICVVEESKDVVAIERTREFRGRYHVLGGAINPIGGVGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ LI R+ + E+I A EG+ TA Y+ ++ + + +TRLA G+PMG +L+ Sbjct: 121 LHIRELIARLADGVVTEIILATDPNTEGEVTASYLARQIAPMGLTVTRLASGLPMGGDLE 180 Query: 185 YLDDGTIFEAIRSRT 199 + D+ T+ A R Sbjct: 181 WADEVTLGRAFEGRR 195 >gi|328956612|ref|YP_004373998.1| recombination protein RecR [Carnobacterium sp. 17-4] gi|328672936|gb|AEB28982.1| recombination protein RecR [Carnobacterium sp. 17-4] Length = 198 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 121/196 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG G ++A R + +E+ + A+++ + + CS CG Sbjct: 3 YPEPISKLMDSYMKLPGIGAKTAARLAFFTIDMREEDVTDFAKSLISAKRDLHYCSNCGQ 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S ++VVED D+ ALE+ + + LYHVL G LSP++ GPEDI Sbjct: 63 ITEDDPCQICQDKSRDRSTVLVVEDPKDVMALEKMREYHGLYHVLHGVLSPIEGTGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI+R++ +I E+I A +A+ EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NIPSLIKRLQSDEINEVIIATNASAEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R L Sbjct: 183 ADEITLLKAVEGRREL 198 >gi|302035665|ref|YP_003795987.1| recombination protein recR [Candidatus Nitrospira defluvii] gi|300603729|emb|CBK40060.1| Recombination protein recR [Candidatus Nitrospira defluvii] Length = 200 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 76/193 (39%), Positives = 121/193 (62%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L++ L R+PG G +SA+R HL+K + + LAEA+ + + + C C N+ Sbjct: 8 LLAKLVRELVRLPGIGQKSAQRLAFHLLKAEREDAMRLAEAIQAVKDGLSFCRQCRNIAE 67 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C C D +RD S I+V+E+ + L+A+ER+ LYHVL G LSPLD +GP DI + Sbjct: 68 GELCEFCRDPKRDRSKILVIEEPSTLYAIERAGGYRGLYHVLLGVLSPLDGVGPSDIRAE 127 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++R++ + E+I A + TIEG+ TA Y+ LK V++TR+AYGIP+G +++Y D+ Sbjct: 128 ELLDRVKAGGVEEVIVATNPTIEGEATAIYLTRLLKPHHVRVTRIAYGIPVGMDIEYADE 187 Query: 189 GTIFEAIRSRTVL 201 T+ ++I R L Sbjct: 188 VTLVKSIEGRRDL 200 >gi|24379076|ref|NP_721031.1| recombination protein RecR [Streptococcus mutans UA159] gi|73621519|sp|Q8DV99|RECR_STRMU RecName: Full=Recombination protein recR gi|24376974|gb|AAN58337.1|AE014903_13 putative recombination protein RecM [Streptococcus mutans UA159] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 121/198 (61%), Gaps = 1/198 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ ++PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD S ++VVED D+ A+E+ + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDDDPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 I ++SL+ R+ I E+I A +AT +G+ TA YI LK + +TRLA G+ +GS++ Sbjct: 122 INLKSLLTRLRDNSDIHEVIIATNATADGEATAMYISRVLKPAGITVTRLARGLAVGSDI 181 Query: 184 DYLDDGTIFEAIRSRTVL 201 +Y D+ T+ AI +RT L Sbjct: 182 EYADEVTLLRAIENRTEL 199 >gi|254555741|ref|YP_003062158.1| recombination protein RecR [Lactobacillus plantarum JDM1] gi|254044668|gb|ACT61461.1| recombination protein RecR [Lactobacillus plantarum JDM1] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + + A+++ + CSICGN Sbjct: 3 YPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S ++VVE+ D+ A+E+ K N LYHVL G LSP+D GPEDI Sbjct: 63 ITEDDPCVICKDKSRDQSTVLVVEEAKDVMAMEKVKEYNGLYHVLHGVLSPIDGKGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS++ Sbjct: 123 NIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSDIQ 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A+ R + Sbjct: 183 YADEMTLFKAVEGRQEM 199 >gi|116493220|ref|YP_804955.1| recombination protein RecR [Pediococcus pentosaceus ATCC 25745] gi|122265316|sp|Q03E59|RECR_PEDPA RecName: Full=Recombination protein recR gi|116103370|gb|ABJ68513.1| DNA replication and repair protein RecR [Pediococcus pentosaceus ATCC 25745] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + ++ + A+A+ + + CSICGN Sbjct: 3 YPEPIAKLIDSFMKLPGIGYKTATRLAFFTLDMEKDDVTEFAKALISAQRDLSFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD ++VVED D+ ++E+ K + LYHVL G LSP+D GPEDI Sbjct: 63 ITEDDPCDICQDPSRDQKAVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +L+ R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIAALLTRLQKNEAIKEVIIATNATPEGEATAMYISRLVKPSGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+++A+ RT + Sbjct: 183 YADQMTLYKAVEGRTEM 199 >gi|183985200|ref|YP_001853491.1| recombination protein RecR [Mycobacterium marinum M] gi|183178526|gb|ACC43636.1| recombination protein RecR [Mycobacterium marinum M] Length = 203 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE Sbjct: 61 NVSDDERCRICADPRRDGSLVCVVEEPKDIQAVERTREYRGRYHVLGGALDPLSGIGPEQ 120 Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALTGRRAM 202 >gi|254476313|ref|ZP_05089699.1| recombination protein RecR [Ruegeria sp. R11] gi|214030556|gb|EEB71391.1| recombination protein RecR [Ruegeria sp. R11] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 100/200 (50%), Positives = 141/200 (70%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + EIENLI ++A++PG GPRSARRA LHL++K+ LL PLA+++ + C Sbjct: 1 MRDTSTSEIENLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLADSITEVAATARECL 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CGN+ T D C IC D +R + VVEDV+DLWA+ER+ YHVLGG+LS LD +G Sbjct: 61 NCGNIGTNDICPICEDNERANGELCVVEDVSDLWAMERAGVFKGRYHVLGGTLSALDAVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+D+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G Sbjct: 121 PDDLRIPRLLDRVPAEAVTEVILALNATIDGQTTAHYIADQLSG-QVRLTSLAQGVPIGG 179 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GTI A+R+R + Sbjct: 180 ELDYLDEGTISAALRARKEI 199 >gi|221135202|ref|ZP_03561505.1| recombination protein RecR [Glaciecola sp. HTCC2999] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ +PG G +SA+R HL+++ + L+ ++ + V C C Sbjct: 3 YSPLITELIESFKCLPGVGAKSAQRMAFHLLERNREGAMRLSHSLHDAMEHVTHCESCRT 62 Query: 66 VDTTDPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC R + +VE D+ A+E++ Y VL G LSP+D IGP + Sbjct: 63 FTESKLCGICSSPARKQAQTLCIVESPQDILAIEQTSEFGGQYFVLMGHLSPIDGIGPAE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + I+E+I A + T+EG+ TAHYI DVK TR+A+G+P+G EL+ Sbjct: 123 IGLDILAQRLANENIQEVILATNPTVEGEATAHYIGQMCTKHDVKATRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A R + Sbjct: 183 YIDGNTLTHAFSGRRSI 199 >gi|317047212|ref|YP_004114860.1| recombination protein RecR [Pantoea sp. At-9b] gi|316948829|gb|ADU68304.1| recombination protein RecR [Pantoea sp. At-9b] Length = 201 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPQD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEQETLQEVILATNPTVEGEATANYIAELCSQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|296328102|ref|ZP_06870635.1| recombination protein R [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154773|gb|EFG95557.1| recombination protein R [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 197 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 114/197 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C ICG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKKNVKKCHICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C IC D RD +I VVE+ D+ LER+ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCHICSDNARDHRIICVVEESKDIMILERTTKYRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRIEI 197 >gi|329944061|ref|ZP_08292327.1| recombination protein RecR [Actinomyces sp. oral taxon 170 str. F0386] gi|328531107|gb|EGF57958.1| recombination protein RecR [Actinomyces sp. oral taxon 170 str. F0386] Length = 202 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +++LI +PG GP+SA+R H++ + L EA+ + KV C Sbjct: 1 MP-AVYEGAVQDLIDEFGELPGIGPKSAQRMAFHVLAADSAAVERLIEALRAVKAKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ + Sbjct: 60 ETCGNIAEAPQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ ++ L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G Sbjct: 120 GPDDLRVRELFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 ++L+Y D+ T+ A R Sbjct: 180 ADLEYADEVTLGRAFEGRR 198 >gi|15610851|ref|NP_218232.1| recombination protein RecR [Mycobacterium tuberculosis H37Rv] gi|15843336|ref|NP_338373.1| recombination protein RecR [Mycobacterium tuberculosis CDC1551] gi|31794887|ref|NP_857380.1| recombination protein RecR [Mycobacterium bovis AF2122/97] gi|121639631|ref|YP_979855.1| recombination protein RecR [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663580|ref|YP_001285103.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra] gi|148824920|ref|YP_001289674.1| recombination protein RecR [Mycobacterium tuberculosis F11] gi|167970870|ref|ZP_02553147.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra] gi|215405767|ref|ZP_03417948.1| recombination protein RecR [Mycobacterium tuberculosis 02_1987] gi|215413642|ref|ZP_03422310.1| recombination protein RecR [Mycobacterium tuberculosis 94_M4241A] gi|215424958|ref|ZP_03422877.1| recombination protein RecR [Mycobacterium tuberculosis T92] gi|218755499|ref|ZP_03534295.1| recombination protein RecR [Mycobacterium tuberculosis GM 1503] gi|219559798|ref|ZP_03538874.1| recombination protein RecR [Mycobacterium tuberculosis T17] gi|224992127|ref|YP_002646816.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800761|ref|YP_003033762.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435] gi|254233210|ref|ZP_04926536.1| recombination protein recR [Mycobacterium tuberculosis C] gi|254366260|ref|ZP_04982304.1| recombination protein recR [Mycobacterium tuberculosis str. Haarlem] gi|254552825|ref|ZP_05143272.1| recombination protein RecR [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184636|ref|ZP_05762110.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A] gi|260198760|ref|ZP_05766251.1| recombination protein RecR [Mycobacterium tuberculosis T46] gi|260202916|ref|ZP_05770407.1| recombination protein RecR [Mycobacterium tuberculosis K85] gi|289441151|ref|ZP_06430895.1| recombination protein RecR [Mycobacterium tuberculosis T46] gi|289445314|ref|ZP_06435058.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A] gi|289555980|ref|ZP_06445190.1| recombination protein recR [Mycobacterium tuberculosis KZN 605] gi|289571959|ref|ZP_06452186.1| recombination protein recR [Mycobacterium tuberculosis T17] gi|289572366|ref|ZP_06452593.1| recombination protein recR [Mycobacterium tuberculosis K85] gi|289747554|ref|ZP_06506932.1| recombination protein recr [Mycobacterium tuberculosis 02_1987] gi|289748233|ref|ZP_06507611.1| recombination protein recR [Mycobacterium tuberculosis T92] gi|289763896|ref|ZP_06523274.1| recombination protein recR [Mycobacterium tuberculosis GM 1503] gi|297636393|ref|ZP_06954173.1| recombination protein RecR [Mycobacterium tuberculosis KZN 4207] gi|297733387|ref|ZP_06962505.1| recombination protein RecR [Mycobacterium tuberculosis KZN R506] gi|298527192|ref|ZP_07014601.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A] gi|306778072|ref|ZP_07416409.1| recombination protein recR [Mycobacterium tuberculosis SUMu001] gi|306778604|ref|ZP_07416941.1| recombination protein recR [Mycobacterium tuberculosis SUMu002] gi|306786627|ref|ZP_07424949.1| recombination protein recR [Mycobacterium tuberculosis SUMu003] gi|306790993|ref|ZP_07429315.1| recombination protein recR [Mycobacterium tuberculosis SUMu004] gi|306791312|ref|ZP_07429614.1| recombination protein recR [Mycobacterium tuberculosis SUMu005] gi|306795377|ref|ZP_07433679.1| recombination protein recR [Mycobacterium tuberculosis SUMu006] gi|306801348|ref|ZP_07438016.1| recombination protein recR [Mycobacterium tuberculosis SUMu008] gi|306805559|ref|ZP_07442227.1| recombination protein recR [Mycobacterium tuberculosis SUMu007] gi|306969956|ref|ZP_07482617.1| recombination protein recR [Mycobacterium tuberculosis SUMu009] gi|306974189|ref|ZP_07486850.1| recombination protein recR [Mycobacterium tuberculosis SUMu010] gi|307081897|ref|ZP_07491067.1| recombination protein recR [Mycobacterium tuberculosis SUMu011] gi|307086510|ref|ZP_07495623.1| recombination protein recR [Mycobacterium tuberculosis SUMu012] gi|313660718|ref|ZP_07817598.1| recombination protein RecR [Mycobacterium tuberculosis KZN V2475] gi|54039039|sp|P65991|RECR_MYCBO RecName: Full=Recombination protein recR gi|54041798|sp|P65990|RECR_MYCTU RecName: Full=Recombination protein recR gi|171704440|sp|A1KQ47|RECR_MYCBP RecName: Full=Recombination protein recR gi|172047917|sp|A5U941|RECR_MYCTA RecName: Full=Recombination protein recR gi|2960139|emb|CAA18037.1| PROBABLE RECOMBINATION PROTEIN RECR [Mycobacterium tuberculosis H37Rv] gi|13883698|gb|AAK48187.1| recR protein [Mycobacterium tuberculosis CDC1551] gi|31620485|emb|CAD95928.1| RECOMBINATION PROTEIN RECR [Mycobacterium bovis AF2122/97] gi|121495279|emb|CAL73765.1| Recombination protein recR [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603003|gb|EAY61278.1| recombination protein recR [Mycobacterium tuberculosis C] gi|134151772|gb|EBA43817.1| recombination protein recR [Mycobacterium tuberculosis str. Haarlem] gi|148507732|gb|ABQ75541.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra] gi|148723447|gb|ABR08072.1| recombination protein recR [Mycobacterium tuberculosis F11] gi|224775242|dbj|BAH28048.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322264|gb|ACT26867.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435] gi|289414070|gb|EFD11310.1| recombination protein RecR [Mycobacterium tuberculosis T46] gi|289418272|gb|EFD15473.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A] gi|289440612|gb|EFD23105.1| recombination protein recR [Mycobacterium tuberculosis KZN 605] gi|289536797|gb|EFD41375.1| recombination protein recR [Mycobacterium tuberculosis K85] gi|289545713|gb|EFD49361.1| recombination protein recR [Mycobacterium tuberculosis T17] gi|289688082|gb|EFD55570.1| recombination protein recr [Mycobacterium tuberculosis 02_1987] gi|289688820|gb|EFD56249.1| recombination protein recR [Mycobacterium tuberculosis T92] gi|289711402|gb|EFD75418.1| recombination protein recR [Mycobacterium tuberculosis GM 1503] gi|298496986|gb|EFI32280.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A] gi|308213601|gb|EFO73000.1| recombination protein recR [Mycobacterium tuberculosis SUMu001] gi|308328334|gb|EFP17185.1| recombination protein recR [Mycobacterium tuberculosis SUMu002] gi|308328738|gb|EFP17589.1| recombination protein recR [Mycobacterium tuberculosis SUMu003] gi|308332580|gb|EFP21431.1| recombination protein recR [Mycobacterium tuberculosis SUMu004] gi|308340071|gb|EFP28922.1| recombination protein recR [Mycobacterium tuberculosis SUMu005] gi|308344061|gb|EFP32912.1| recombination protein recR [Mycobacterium tuberculosis SUMu006] gi|308347859|gb|EFP36710.1| recombination protein recR [Mycobacterium tuberculosis SUMu007] gi|308351847|gb|EFP40698.1| recombination protein recR [Mycobacterium tuberculosis SUMu008] gi|308352512|gb|EFP41363.1| recombination protein recR [Mycobacterium tuberculosis SUMu009] gi|308356462|gb|EFP45313.1| recombination protein recR [Mycobacterium tuberculosis SUMu010] gi|308360409|gb|EFP49260.1| recombination protein recR [Mycobacterium tuberculosis SUMu011] gi|308364105|gb|EFP52956.1| recombination protein recR [Mycobacterium tuberculosis SUMu012] gi|323717579|gb|EGB26781.1| recombination protein recR [Mycobacterium tuberculosis CDC1551A] gi|328460489|gb|AEB05912.1| recombination protein recR [Mycobacterium tuberculosis KZN 4207] Length = 203 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R VL Sbjct: 181 GGDLEFADELTLGRALAGRRVL 202 >gi|144898668|emb|CAM75532.1| Recombinational DNA repair protein (RecF pathway) [Magnetospirillum gryphiswaldense MSR-1] Length = 196 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 104/196 (53%), Positives = 142/196 (72%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE L+++L+R+PG GPRSARR LHLV+K+E LL PLA+A++ + + V CS+CG Sbjct: 1 MVGPEIERLMQLLSRLPGLGPRSARRVALHLVEKRETLLLPLAKALSAVGDSVKTCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N D+ DPC+IC D +RD +++ VVE V LWA+ER+ + YHVLGG LS LD IGP+D Sbjct: 61 NFDSVDPCSICADPRRDQTILCVVEGVGSLWAMERASVFSGRYHVLGGLLSALDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L R+ IRE++ A AT+EGQTTAHYI D L + ++ LA+G+P+G ELD Sbjct: 121 LGLGRLRARL-DGSIREVVVATPATVEGQTTAHYIADFLADCGITVSGLAHGVPVGGELD 179 Query: 185 YLDDGTIFEAIRSRTV 200 YLDDGTI A+R+R Sbjct: 180 YLDDGTIGAALRARRS 195 >gi|19703754|ref|NP_603316.1| recombination protein recR [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|24212188|sp|Q8RG96|RECR_FUSNN RecName: Full=Recombination protein recR gi|19713888|gb|AAL94615.1| Recombination protein recR [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 197 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 114/197 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ + E+ + AEA+ + V C +CG Sbjct: 1 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N +D C IC D RD +I VVE+ D+ LE++ +YHVL G L PL+ I P + Sbjct: 61 NYCESDTCNICSDNARDHRIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL+ERI I E+I A + IEG+TTA Y+ +K +KIT+LA GIPMG L+ Sbjct: 121 LNIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D TI A+ R + Sbjct: 181 FSDTATISRALDDRIEI 197 >gi|261345762|ref|ZP_05973406.1| recombination protein RecR [Providencia rustigianii DSM 4541] gi|282566251|gb|EFB71786.1| recombination protein RecR [Providencia rustigianii DSM 4541] Length = 199 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ CS C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP D Sbjct: 63 FTEQDICNICDNPRRQQNGLICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSSETITEVILATNPTVEGEATANYIGQMCAQYGVVASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 MVDGTTLSHSLAGRQRL 199 >gi|251790617|ref|YP_003005338.1| recombination protein RecR [Dickeya zeae Ech1591] gi|247539238|gb|ACT07859.1| recombination protein RecR [Dickeya zeae Ech1591] Length = 201 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L+ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMDALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C+IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEVCSICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLVTETISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|255691811|ref|ZP_05415486.1| recombination protein RecR [Bacteroides finegoldii DSM 17565] gi|260622529|gb|EEX45400.1| recombination protein RecR [Bacteroides finegoldii DSM 17565] Length = 205 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 123/199 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 1 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIMTLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTEICQICANPQRDASTICVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 121 GPSDLQIESLVRRVSEGGIKEVILALSTTMEGDTTNFYIYRKLDRLGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|212634564|ref|YP_002311089.1| recombination protein RecR [Shewanella piezotolerans WP3] gi|226739008|sp|B8CN00|RECR_SHEPW RecName: Full=Recombination protein recR gi|212556048|gb|ACJ28502.1| Recombination protein RecR [Shewanella piezotolerans WP3] Length = 199 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA+++ ++V C C Sbjct: 3 FSPLVDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGSKLADSLGKAMSEVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC+ +R +SVI VVE AD+ A+E + Y VL G LSPLD +GP++ Sbjct: 63 FTEETYCPICVSTKRGHSSVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + ++ ELI A + T+EG TAHYI D K ++ ++R+A+G+P+G EL+ Sbjct: 123 LGLALLETHLASGEVTELILATNPTVEGDATAHYIADMAKNHELAVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R + Sbjct: 183 YVDSTTLALSFNGRLPI 199 >gi|116617406|ref|YP_817777.1| DNA replication and repair protein RecR [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096253|gb|ABJ61404.1| DNA replication and repair protein RecR [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 213 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R + + E+ + ++A+ + + CSICGN Sbjct: 15 YPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSICGN 74 Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + TDPC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPE Sbjct: 75 ITATDTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 134 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ E ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS+ Sbjct: 135 DINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSD 194 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D+ T+ +A++ RT L Sbjct: 195 IDYADELTLIKAVQGRTKL 213 >gi|172045849|sp|Q03ZG8|RECR_LEUMM RecName: Full=Recombination protein recR Length = 201 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R + + E+ + ++A+ + + CSICGN Sbjct: 3 YPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSICGN 62 Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + TDPC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPE Sbjct: 63 ITATDTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 122 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ E ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS+ Sbjct: 123 DINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSD 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D+ T+ +A++ RT L Sbjct: 183 IDYADELTLIKAVQGRTKL 201 >gi|157961351|ref|YP_001501385.1| recombination protein RecR [Shewanella pealeana ATCC 700345] gi|189029375|sp|A8H2R3|RECR_SHEPA RecName: Full=Recombination protein recR gi|157846351|gb|ABV86850.1| recombination protein RecR [Shewanella pealeana ATCC 700345] Length = 199 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA+++A ++V C C Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC+ +R S VI VVE AD+ A+E + Y VL G LSPLD +GP++ Sbjct: 63 FTEETYCPICVSTKRGHSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + + ELI A + T+EG TAHYI D K + ++R+A+G+P+G EL+ Sbjct: 123 LGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADMAKRHQLTVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R + Sbjct: 183 YVDSTTLALSFNGRLPM 199 >gi|260914407|ref|ZP_05920876.1| recombination protein R [Pasteurella dagmatis ATCC 43325] gi|260631508|gb|EEX49690.1| recombination protein R [Pasteurella dagmatis ATCC 43325] Length = 200 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+LI+ L +PG GP+SA+R HL+++ LA A+ +K+ C+ C Sbjct: 3 TSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRNGGMDLARALTEAMSKIGHCTQCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++ Sbjct: 63 FTEEEVCTICNNSRRQHSGLLCVVEQPSDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPKE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R++ + E+I A + T+EG TA+YI + +VK+TR+A+GIP+G EL+ Sbjct: 123 IGLHLLQQRLQEESFHEVILATNPTVEGDATANYIAEICMQHNVKVTRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R L Sbjct: 183 MVDGTTLTHSFLGRRQL 199 >gi|271499627|ref|YP_003332652.1| recombination protein RecR [Dickeya dadantii Ech586] gi|270343182|gb|ACZ75947.1| recombination protein RecR [Dickeya dadantii Ech586] Length = 201 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C+IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQDVCSICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLASETISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|326800491|ref|YP_004318310.1| recombination protein recR [Sphingobacterium sp. 21] gi|326551255|gb|ADZ79640.1| Recombination protein recR [Sphingobacterium sp. 21] Length = 204 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 121/198 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + +R+PG G ++A R LHL+ + + ++A+ + +++C C++ Sbjct: 1 MNFSSKLLENAVNEFSRLPGIGQKTALRLVLHLLNQPADDVTKFSDALTKLKSEICYCAV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC +RD +I VVED D+ A+E + N +YHVLGG +SP+D +GP Sbjct: 61 CHNIADEAICEICNAPKRDKGLICVVEDTRDVMAIENTNQFNGVYHVLGGLISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ I SLI R+ + E+I A+SAT+EG TT Y+ KLK +V+I+ +A GI G E Sbjct: 121 SDLSIDSLINRLRENDVHEIILALSATMEGDTTIFYLYKKLKDFNVQISTIARGISFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y+D+ T+ +I +R Sbjct: 181 LEYVDEVTLGRSIVTRVP 198 >gi|320531495|ref|ZP_08032451.1| recombination protein RecR [Actinomyces sp. oral taxon 171 str. F0337] gi|320136292|gb|EFW28284.1| recombination protein RecR [Actinomyces sp. oral taxon 171 str. F0337] Length = 202 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +++LI +PG GP+SA+R H++ + L EA+ + KV C Sbjct: 1 MP-AVYEGAVQDLIDEFGELPGIGPKSAQRMAFHVLAADSAAVERLIEALRAVKAKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+ C IC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ + Sbjct: 60 ETCGNIAEAPQCTICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ ++ L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G Sbjct: 120 GPDDLRVRELFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 ++L+Y D+ T+ A R Sbjct: 180 ADLEYADEVTLGRAFEGRR 198 >gi|270294151|ref|ZP_06200353.1| recombination protein RecR [Bacteroides sp. D20] gi|270275618|gb|EFA21478.1| recombination protein RecR [Bacteroides sp. D20] Length = 205 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 125/200 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFPSTLLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC QRDASV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCCICSSPQRDASVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLQIESLVQRVAAGGINEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIVNRTP 200 >gi|212711279|ref|ZP_03319407.1| hypothetical protein PROVALCAL_02351 [Providencia alcalifaciens DSM 30120] gi|212686008|gb|EEB45536.1| hypothetical protein PROVALCAL_02351 [Providencia alcalifaciens DSM 30120] Length = 199 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP D Sbjct: 63 FTEQEICNICDNPRRQQNGLICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLASETITEVILATNPTVEGEATASYIGQMCAQYGVTASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R+ L Sbjct: 183 MVDSTTLSHSLSGRSKL 199 >gi|28377568|ref|NP_784460.1| recombination protein RecR [Lactobacillus plantarum WCFS1] gi|300769762|ref|ZP_07079644.1| recombination protein R [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179720|ref|YP_003923848.1| recombination protein RecR [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258541|sp|Q88YP8|RECR_LACPL RecName: Full=Recombination protein recR gi|28270400|emb|CAD63303.1| recombination protein RecR [Lactobacillus plantarum WCFS1] gi|300492670|gb|EFK27856.1| recombination protein R [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045211|gb|ADN97754.1| recombination protein RecR [Lactobacillus plantarum subsp. plantarum ST-III] Length = 199 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + + A+++ + CSICGN Sbjct: 3 YPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S ++VVE+ D+ A+E+ K N LYHVL G LSP+D GPEDI Sbjct: 63 ITEDDPCVICKDKSRDQSTVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R++ + I+E+I A +AT EG+ TA YI +K +K+TRLA+G+ +GS++ Sbjct: 123 NIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSDIQ 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A+ R + Sbjct: 183 YADEMTLFKAVEGRQEM 199 >gi|325066587|ref|ZP_08125260.1| recombination protein RecR [Actinomyces oris K20] gi|326772634|ref|ZP_08231918.1| recombination protein RecR [Actinomyces viscosus C505] gi|326637266|gb|EGE38168.1| recombination protein RecR [Actinomyces viscosus C505] Length = 202 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +++LI +PG GP+SA+R H++ + L EA+ + KV C Sbjct: 1 MP-AVYEGAVQDLIDEFGELPGIGPKSAQRMAFHVLAADAAAVERLIEALRAVKAKVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ + Sbjct: 60 ETCGNIAEAPQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ ++ L R+ ++ E+I A + G+ TA Y+ L+ + V ++RLA G+P+G Sbjct: 120 GPDDLRVRELFSRLGDGEVEEVILATDPDVVGEATAAYLTRMLRTMAVPVSRLASGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSRT 199 ++L+Y D+ T+ A R Sbjct: 180 ADLEYADEVTLGRAFEGRR 198 >gi|53719134|ref|YP_108120.1| recombination protein RecR [Burkholderia pseudomallei K96243] gi|52209548|emb|CAH35501.1| recombination protein [Burkholderia pseudomallei K96243] Length = 202 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 1/202 (0%) Query: 1 MQKKITGKE-IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M+ I + L++ L +PG GP+SA+R HL++ + L ++ + Sbjct: 1 MRMSIKPPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD Sbjct: 61 CEKCNTFTEAQVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+ Sbjct: 121 IGPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPV 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G EL+Y+D GTI A+ R L Sbjct: 181 GGELEYVDAGTIARAMLDRRTL 202 >gi|257438603|ref|ZP_05614358.1| recombination protein RecR [Faecalibacterium prausnitzii A2-165] gi|257198947|gb|EEU97231.1| recombination protein RecR [Faecalibacterium prausnitzii A2-165] Length = 199 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 117/199 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +E LI+ ++ PG G + A R ++ +Q LA A+ N + K+ C + Sbjct: 1 MGYNAAPLEKLIEEFSKFPGIGRKGATRMAYQVLSMSDQDAAALAGAIQNAHTKLHRCRV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N + C IC +RD SVI VVE D+ A ER++ + +YHVL G +SP+D IG Sbjct: 61 CQNYTEAELCPICASAKRDRSVICVVETPRDVQAFERTREYHGMYHVLHGLISPMDGIGA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++ L+ R+ +++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G+ Sbjct: 121 EQLTVKELLARLGDGEVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGAS 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T++ A+ R L Sbjct: 181 LEYTDETTLYRALSGRGEL 199 >gi|78189156|ref|YP_379494.1| recombination protein RecR [Chlorobium chlorochromatii CaD3] gi|123579732|sp|Q3ARC4|RECR_CHLCH RecName: Full=Recombination protein recR gi|78171355|gb|ABB28451.1| RecR protein [Chlorobium chlorochromatii CaD3] Length = 204 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 130/202 (64%), Gaps = 5/202 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + ++ LI A++PG G ++A+R ++++ + + LA+A+ ++ KV C+I Sbjct: 1 MRFPSVALDTLIDEFAKLPGIGRKTAQRLAMYILHEPKIEAEQLAKALLDVKEKVVRCTI 60 Query: 63 CGNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ TDPCAIC + RD +VI VVE D+ A E++ LYHVL G +SPLD + Sbjct: 61 CQNITDVGTDPCAICASKARDRTVICVVESPVDMLAFEKTGHYKGLYHVLHGVISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI ++ L+ RI V + +RE++ A++ TIEG+TT+ Y+ LK + + +T++A GI Sbjct: 121 GPDDIKVRELLARIPVGEASGVREVVLALNPTIEGETTSLYLARLLKPLGIAVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 P+G+EL+Y+D+ T+ A+ RT Sbjct: 181 PVGAELEYVDEATLSRAMEGRT 202 >gi|215448054|ref|ZP_03434806.1| recombination protein RecR [Mycobacterium tuberculosis T85] gi|289759875|ref|ZP_06519253.1| recombination protein recR [Mycobacterium tuberculosis T85] gi|294995375|ref|ZP_06801066.1| recombination protein RecR [Mycobacterium tuberculosis 210] gi|289715439|gb|EFD79451.1| recombination protein recR [Mycobacterium tuberculosis T85] gi|326905554|gb|EGE52487.1| recombination protein recR [Mycobacterium tuberculosis W-148] Length = 203 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTCVLAKVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDASV+ +VE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R VL Sbjct: 181 GGDLEFADELTLGRALAGRRVL 202 >gi|304440575|ref|ZP_07400461.1| recombination protein R [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370951|gb|EFM24571.1| recombination protein R [Peptoniphilus duerdenii ATCC BAA-1640] Length = 196 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 120/194 (61%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + +ENLI L ++PG G +SA R +++++ ++ LA+A+ + + CSIC N Sbjct: 2 SRPLENLIYELTKLPGVGDKSAERILYYILEQDKEEARGLAKAIVDAAENIEECSICHNF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 DPC IC D+ RD + I VVE D+ ++E++ + + LYHVL G++ P I P D+ Sbjct: 62 TDDDPCDICTDESRDRTTICVVERPRDVASMEKTNSYHGLYHVLHGTVQPTRGIFPSDLR 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 SL++R++ I+E+I A + T +G TTA YI + LK V +TR+A+GIP+G L+Y Sbjct: 122 FASLVKRVKDGGIKEVIIATNPTTDGDTTAMYIQEALKDTGVLMTRIAHGIPVGGNLEYY 181 Query: 187 DDGTIFEAIRSRTV 200 D+ TI A+++R Sbjct: 182 DELTIETALKNRVS 195 >gi|320094880|ref|ZP_08026618.1| recombination protein R [Actinomyces sp. oral taxon 178 str. F0338] gi|319978209|gb|EFW09814.1| recombination protein R [Actinomyces sp. oral taxon 178 str. F0338] Length = 197 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 118/194 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI ++PG GP+SA+R +H+++ E + L +A+ + +V C ICG Sbjct: 1 MYEGALQDLIDEFGQLPGIGPKSAQRMAIHVLEADEDDVARLVDAINAVRTRVRHCEICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C+IC D +RD + + VV++ D+ A+E ++ YHVLGG + P+ IGPE Sbjct: 61 NVTEEPTCSICRDARRDPTKVCVVQEPKDIQAVEAARVFRGRYHVLGGVIDPIHGIGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L++R+ +I E+I A + +EG+ TA Y+ L + ++ +RLA G+PMG++L+ Sbjct: 121 LRIAALMKRLGEGEIAEVILATNPNVEGEATAAYLARMLSTMGIETSRLAMGLPMGADLE 180 Query: 185 YLDDGTIFEAIRSR 198 Y D T+ A+ R Sbjct: 181 YADAVTLGRALEGR 194 >gi|226944095|ref|YP_002799168.1| recombination protein RecR [Azotobacter vinelandii DJ] gi|259563687|sp|C1DEK8|RECR_AZOVD RecName: Full=Recombination protein recR gi|226719022|gb|ACO78193.1| RecR protein [Azotobacter vinelandii DJ] Length = 199 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R LHL+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALHLLERDRSGGLRLAQALTQALEHVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEDELCPQCADPRRDDSLLCVVQGPMDVFAIEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ R+E E+I A + T+EG+ TAHYI L DV ++R+A+G+P+G EL+ Sbjct: 122 GIPELLARVEQGAFEEVIIATNPTVEGEATAHYIAQTLASSDVTVSRIAHGVPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLSHALAGRRPI 197 >gi|332637115|ref|ZP_08415978.1| recombination protein RecR [Weissella cibaria KACC 11862] Length = 199 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R H + +E+ + A+++ + + CSICGN Sbjct: 3 YPEPIAKLIDSYTKLPGIGIKTATRLAFHTIDMQEEDVTGFAQSLISAKRDLSFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T PCAIC D RD S ++VVE+V DL A+E + LYHVL G LSPL GP+DI Sbjct: 63 LTETQPCAICSDPTRDQSQVLVVEEVRDLMAIENTGEYRGLYHVLHGVLSPLSGKGPDDI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL+ R++ + +E+I A +A EG+ TA Y+ LK + ++RLA G+ +GS++D Sbjct: 123 NIESLVTRLQKDEDIQEVIVATNANAEGEATAMYLSRLLKPAGLTVSRLATGLSVGSDID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ RT L Sbjct: 183 YADEITLIKAVEGRTKL 199 >gi|145588887|ref|YP_001155484.1| recombination protein RecR [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189029366|sp|A4SWQ6|RECR_POLSQ RecName: Full=Recombination protein recR gi|145047293|gb|ABP33920.1| DNA replication and repair protein RecR [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 204 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + + LI+ L +PG GP+SA+R +L++ LA+++ + V Sbjct: 1 MARVEAPQDALGRLIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVDTVGH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C T C+ C D +RD S++ +VE AD +E++ + Y VL G +SPLD Sbjct: 61 CARCNTFSETQICSTCADGRRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRISPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAY 175 +GP +I L+ RIE RE++ A + T EG+ TAHYI + LK +K+TR+A Sbjct: 121 MGPNEIHFDRLLTRIENPDTGVPIREVVLATNFTSEGEATAHYIGEVLKAKGIKVTRIAR 180 Query: 176 GIPMGSELDYLDDGTIFEAIRSRT 199 GIP+G EL+Y+D GT+ A+ R Sbjct: 181 GIPVGGELEYVDAGTLARALMDRR 204 >gi|103485745|ref|YP_615306.1| recombination protein RecR [Sphingopyxis alaskensis RB2256] gi|123380172|sp|Q1GWJ9|RECR_SPHAL RecName: Full=Recombination protein recR gi|98975822|gb|ABF51973.1| recombination protein RecR [Sphingopyxis alaskensis RB2256] Length = 198 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 99/196 (50%), Positives = 145/196 (73%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EIE L++ LAR+PG GPRSARRA LHL+KK+E PL A+ + ++ C+ CG Sbjct: 1 MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT DPCAIC D +RDA + VVE+V+DLWAL++S+ YHVLGG LS L+ + P+D Sbjct: 61 NIDTHDPCAICADPRRDARSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ R+ I E++ A++AT+EGQTTAHY+ ++L+G V++T+LA+G+P+G ELD Sbjct: 121 LSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLEGYPVRLTQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|295425169|ref|ZP_06817873.1| recombination protein R [Lactobacillus amylolyticus DSM 11664] gi|295065145|gb|EFG56049.1| recombination protein R [Lactobacillus amylolyticus DSM 11664] Length = 199 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI ++PG G ++A R + + EQ + A+++ + + CSICGN Sbjct: 3 YPLPIAHLIDSYMKLPGIGEKTATRLAFYTLDMPEQDVQEFAKSLTEVKQDLHQCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC + +RD + I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITEQDPCAICSNPERDQTTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDQVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTSL 199 >gi|170726148|ref|YP_001760174.1| recombination protein RecR [Shewanella woodyi ATCC 51908] gi|238688704|sp|B1KNK2|RECR_SHEWM RecName: Full=Recombination protein recR gi|169811495|gb|ACA86079.1| recombination protein RecR [Shewanella woodyi ATCC 51908] Length = 199 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 110/197 (55%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C Sbjct: 3 FSPLVDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGQSLASALSSAMSDVGHCQACRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R S VI VVE AD+ A+E + Y VL G LSPLD +GPE+ Sbjct: 63 FTEETLCPICASHKRGNSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + ++ ELI A + T+EG TAH+I D KG V ++R+A+G+P+G EL+ Sbjct: 123 LGLSLLEAHLASGEVSELILATNPTVEGDATAHFIADMAKGHQVSVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|322392709|ref|ZP_08066169.1| recombination protein R [Streptococcus peroris ATCC 700780] gi|321144701|gb|EFX40102.1| recombination protein R [Streptococcus peroris ATCC 700780] Length = 198 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDEDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|325104135|ref|YP_004273789.1| recombination protein RecR [Pedobacter saltans DSM 12145] gi|324972983|gb|ADY51967.1| recombination protein RecR [Pedobacter saltans DSM 12145] Length = 205 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 124/198 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN ++ +++PG G ++A R LHL+K + + ++ + + + C Sbjct: 1 MNFSSKLLENAVEEFSKLPGVGKKTALRLVLHLLKNSSAEVHQFSNSLTTLKDNIKYCQK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC+ +RD+++I VVED D+ A+E + LYHVL G +SP+D IGP Sbjct: 61 CHNISDNNVCEICLSPKRDSTIICVVEDTRDVMAIENTHQYQGLYHVLNGLISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ I+SL+ERI+ +I+E+IFA+SAT+EG TT Y+ KLK ++KI+ +A GI G E Sbjct: 121 ADLTIESLLERIKSGEIQEIIFALSATMEGDTTIFYLHKKLKDFNIKISTIARGIAFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 ++Y D+ T+ +I +R Sbjct: 181 IEYADEITLGRSIATRVP 198 >gi|224825857|ref|ZP_03698961.1| recombination protein RecR [Lutiella nitroferrum 2002] gi|224602081|gb|EEG08260.1| recombination protein RecR [Lutiella nitroferrum 2002] Length = 199 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ ++ LI L +PG GP+SA+R HL+++ + LA A+ + C Sbjct: 1 MKN---PPSLDQLISALKVLPGVGPKSAQRMAFHLLQRDQAGADRLARALDRALANLTHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C T C +C + R+ + +VE ADL LE+++ + LY VL G LSP+D I Sbjct: 58 ERCNTFSETPLCNLCAEPARNQHQLCIVEMPADLLMLEQARCYDGLYFVLMGRLSPIDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ + L+ R + E+I A + T EG+ TAH I + LK + ++R+A G+P+G Sbjct: 118 GPKDVNLDKLMVRALDGVVEEVIIATNFTAEGEVTAHMIAELLKDRGLAVSRIARGMPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R L Sbjct: 178 GELEYVDSGTLAQALYERRQL 198 >gi|76811798|ref|YP_333766.1| recombination protein RecR [Burkholderia pseudomallei 1710b] gi|76581251|gb|ABA50726.1| recombination protein RecR [Burkholderia pseudomallei 1710b] Length = 202 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 1/202 (0%) Query: 1 MQKKITGKE-IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M+ I + L++ L +PG GP+SA+R HL++ + L ++ + Sbjct: 1 MRMSIKPPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD Sbjct: 61 CEKCNTFTEAQICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+ Sbjct: 121 IGPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPV 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G EL+Y+D GTI A+ R L Sbjct: 181 GGELEYVDAGTIARAMLDRRTL 202 >gi|154245783|ref|YP_001416741.1| recombination protein RecR [Xanthobacter autotrophicus Py2] gi|229470346|sp|A7IGE1|RECR_XANP2 RecName: Full=Recombination protein recR gi|154159868|gb|ABS67084.1| recombination protein RecR [Xanthobacter autotrophicus Py2] Length = 201 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 111/201 (55%), Positives = 146/201 (72%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + G EIE LI+++AR+PG GPRSARR LHL+KK+E L+ PLA AM + K+ C Sbjct: 1 MPRAVAGPEIERLIQLIARLPGLGPRSARRVALHLIKKREALMAPLAAAMTDALGKIVEC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNVD DPC IC D RD ++VV DV DLWALER+ +NA YHVLGG LSPLD + Sbjct: 61 RRCGNVDVCDPCTICTDTSRDRRTLVVVADVGDLWALERAGVLNAPYHVLGGVLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ + L+ R+ ++ E+I A+ AT++GQTTAHYI D L+ V++TRLA G+P+G Sbjct: 121 GPEDLNLAKLVTRVHEDEVGEVILALGATVDGQTTAHYITDLLREAHVRVTRLAQGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GT+ AIR+RT + Sbjct: 181 GELDYLDEGTLSAAIRARTQM 201 >gi|323340132|ref|ZP_08080396.1| recombination protein R [Lactobacillus ruminis ATCC 25644] gi|323092323|gb|EFZ34931.1| recombination protein R [Lactobacillus ruminis ATCC 25644] Length = 199 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG G ++A R + ++ + ++A+ + + + CS+CGN Sbjct: 3 YPEPIAKLIDSYMRLPGIGEKTAVRLAFFTIDMDKEDVSEFSKALVSAKSDLHYCSLCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D+ R+ +IVVE V D+ A E+ + + LYHVL G LSP + IGPEDI Sbjct: 63 ITESDPCVICADKTRNQHQVIVVEQVKDVMAFEKLRDYHGLYHVLHGVLSPSEGIGPEDI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 ++ LI R++ +I+E+I A +AT EG+ TA YI +K +K TRLA+G+ +GS+++ Sbjct: 123 NVKGLIRRLQANPEIKEVILATNATPEGEATAMYISRLIKPAGIKTTRLAHGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A+ R + Sbjct: 183 YADEMTLFKAVEGRQEI 199 >gi|118619460|ref|YP_907792.1| recombination protein RecR [Mycobacterium ulcerans Agy99] gi|171460880|sp|A0PVF2|RECR_MYCUA RecName: Full=Recombination protein recR gi|118571570|gb|ABL06321.1| recombination protein RecR [Mycobacterium ulcerans Agy99] Length = 203 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+ PL IGPE Sbjct: 61 NVSDDERCRICADPRRDGALVCVVEEPKDIQAVERTREYRGRYHVLGGAFDPLSGIGPEQ 120 Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALTGRRAM 202 >gi|312278019|gb|ADQ62676.1| Recombination protein recR [Streptococcus thermophilus ND03] Length = 198 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI ++ PG G ++A R + + ++ + A+ + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSFSKFPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC IC D+ RD + I+VVED D+ A+E+ + LYHVL G +SP++ +GP+D Sbjct: 62 RLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SLI R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++ Sbjct: 122 INLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|240173344|ref|ZP_04752002.1| recombination protein RecR [Mycobacterium kansasii ATCC 12478] Length = 203 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + + L + + + V C++CG Sbjct: 1 MFEGPVQDLIDELGRLPGIGPKSAQRIAFHLLSVEPSDIDRLTAVLGRVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE Sbjct: 61 NVSDGERCRICADPRRDGSLVCVVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPEQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R VL Sbjct: 181 GGDLEFADELTLGRALTGRRVL 202 >gi|113868362|ref|YP_726851.1| recombinational DNA repair protein (RecF pathway) [Ralstonia eutropha H16] gi|113527138|emb|CAJ93483.1| Recombinational DNA repair protein (RecF pathway) [Ralstonia eutropha H16] Length = 318 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 114/203 (56%), Gaps = 4/203 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + ++ L++ L +PG GP+SA+R HL++ + L +A+ + + C Sbjct: 116 KASSPTSLQALVEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCQR 175 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP Sbjct: 176 CNTFTEQEICETCLDDRRDASVLCVVETPADQVMIEQTLTYRGKYFVLMGRLSPLDGIGP 235 Query: 123 EDIGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 +I + L+ R + + E+I A + T EG+ TAHYI + LK +K++RLA G+P Sbjct: 236 REIHLDRLLARATEPELGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVP 295 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +G EL+Y+D GTI A+ R L Sbjct: 296 VGGELEYVDAGTIARAVMDRRNL 318 >gi|254284041|ref|ZP_04959009.1| recombination protein RecR [gamma proteobacterium NOR51-B] gi|219680244|gb|EED36593.1| recombination protein RecR [gamma proteobacterium NOR51-B] Length = 201 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 116/193 (60%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 IE LI+ L +PG GP+SA+R TL L+++ + LA+A+ +V C C N Sbjct: 4 SPSIEALIEALRCLPGVGPKSAQRMTLTLLERDREGAALLAQALTTALERVGRCQRCRNF 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 C IC D +RD +++ VVE AD+ A+E S + ++ VL G LSP+D IGPE+IG Sbjct: 64 TELPVCEICADPRRDQALLCVVETPADVMAIEHSGSYRGVFFVLMGHLSPIDGIGPEEIG 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L R + E+I A + T+EG+TTA+YI + + V I+++A+G+P+G EL++ Sbjct: 124 LTELASRFHEGDLAEVILATNPTVEGETTAYYIAQQARSAGVTISKIAHGVPLGGELEFT 183 Query: 187 DDGTIFEAIRSRT 199 D T+ A+ RT Sbjct: 184 DATTLAHALSGRT 196 >gi|71278497|ref|YP_270358.1| recombination protein RecR [Colwellia psychrerythraea 34H] gi|123631494|sp|Q47XW2|RECR_COLP3 RecName: Full=Recombination protein recR gi|71144237|gb|AAZ24710.1| recombination protein RecR [Colwellia psychrerythraea 34H] Length = 201 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI L +PG G +SA+R L+++ + LA +A + C C N Sbjct: 3 FSPLVQELIDSLKCLPGVGAKSAQRMAFQLLERNRRGGSKLANTLAKAMTDIGHCQQCRN 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R ++ + +VE D+ A+E++ Y VL G LSP+D IGP+D Sbjct: 63 FTEEALCEICQSPKRQLSTTLCIVETPGDVIAIEQTGEFFGKYFVLMGHLSPIDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L ++ + E+I A + T+EG+ TAH+I + + V I+R+A+G+P+G EL+ Sbjct: 123 LGLDILAKQFATGQFSEVILATNPTVEGEATAHFIAELAQQHQVNISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D T+ A+ R Sbjct: 183 YVDGNTLSHALSGRKS 198 >gi|160886051|ref|ZP_02067054.1| hypothetical protein BACOVA_04057 [Bacteroides ovatus ATCC 8483] gi|156108864|gb|EDO10609.1| hypothetical protein BACOVA_04057 [Bacteroides ovatus ATCC 8483] Length = 241 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + ++ + +V C Sbjct: 37 MNQQYPSILLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTATVEAFGNSIITLKREVKYC 96 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 97 KVCHNISDTETCQICANPQRDASTVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 156 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL++R+ I+E+I A+S T+EG TT YI KL + VK++ +A GI +G Sbjct: 157 GPSDLQIESLVQRVAEGGIKEVILALSTTMEGDTTNFYIYRKLDKLGVKLSVIARGISIG 216 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 217 DELEYADEVTLGRSIVNRT 235 >gi|194290030|ref|YP_002005937.1| recombination protein recr [Cupriavidus taiwanensis LMG 19424] gi|229890147|sp|B3R1M6|RECR_CUPTR RecName: Full=Recombination protein recR gi|193223865|emb|CAQ69874.1| Recombination protein recR [Cupriavidus taiwanensis LMG 19424] Length = 204 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 114/204 (55%), Gaps = 4/204 (1%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K + ++ L++ L +PG GP+SA+R HL++ + L +A+ + + C Sbjct: 1 MKASSPTSLQALVEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCQ 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C + C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IG Sbjct: 61 RCNTFTEQEICETCLDDRRDASVLCVVETPADQVMIEQTLTYRGKYFVLMGRLSPLDGIG 120 Query: 122 PEDIGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 P +I + L+ R + + E+I A + T EG+ TAHYI + LK +K++RLA G+ Sbjct: 121 PREIHLDRLLARATEPELGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGV 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G EL+Y+D GTI A+ R L Sbjct: 181 PVGGELEYVDAGTIARAVMDRRNL 204 >gi|325283369|ref|YP_004255910.1| Recombination protein recR [Deinococcus proteolyticus MRP] gi|324315178|gb|ADY26293.1| Recombination protein recR [Deinococcus proteolyticus MRP] Length = 198 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 117/196 (59%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L+R+PG GP+SA+R HL ++ + + L+ A+ +++ C +C N Sbjct: 3 YPPSLVALIRELSRLPGIGPKSAQRLAFHLFEQPAEDIERLSAALLAAKSELHTCPVCFN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD ++I VVE+ D+ ALERS LYHVL G LSP++ +GPE + Sbjct: 63 ITDAELCDVCSDPSRDQNLICVVEEPGDVIALERSGEYQGLYHVLHGVLSPMNGVGPEQL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L+ R ++ E+I A T+EG TA Y+ L+ + +++R+AYG+ +GS L+Y Sbjct: 123 HIKELLPRA--REGLEVILATGTTVEGDATALYLQRLLEPLGAEVSRIAYGLQVGSALEY 180 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ A+ R + Sbjct: 181 ADEVTLGRALLGRQKI 196 >gi|256374360|ref|YP_003098020.1| recombination protein RecR [Actinosynnema mirum DSM 43827] gi|255918663|gb|ACU34174.1| recombination protein RecR [Actinosynnema mirum DSM 43827] Length = 197 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 2/198 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + +G L +A+ + V C +CG Sbjct: 1 MYEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAAEPADIGRLQDALQKVKEGVVFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSAETTCRICRDPRRDLTLICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183 + I+ L+ RI + E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L Sbjct: 121 LRIRQLLTRI-GTDVSEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDL 179 Query: 184 DYLDDGTIFEAIRSRTVL 201 ++ D+ T+ A+ R L Sbjct: 180 EFADELTLGRALSGRRSL 197 >gi|116072458|ref|ZP_01469725.1| RecR protein [Synechococcus sp. BL107] gi|116064980|gb|EAU70739.1| RecR protein [Synechococcus sp. BL107] Length = 192 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 1/190 (0%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 LI R+PG GPR+A+R LHL+ + E + A+A+ ++V C C ++ Sbjct: 3 RLIDQFQRLPGIGPRTAQRLALHLLNQPEDQVQQFADALLAARSQVGQCQSCFHLSADPL 62 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC +R+ +I VV D DL ALER++ YHVLGG +SP+D IGPE + I+ LI Sbjct: 63 CEICSKPERNNGLICVVADSRDLLALERTREFKGRYHVLGGLISPMDGIGPELLHIKPLI 122 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 ERI I E+I A++ ++EG TT+ Y+ +K ++R+AYG+PMGSEL+Y D+ T+ Sbjct: 123 ERIAKDGITEVILALTPSVEGDTTSLYLARLIKPFC-PVSRIAYGLPMGSELEYADEVTL 181 Query: 192 FEAIRSRTVL 201 A+ R + Sbjct: 182 SRALEGRRPM 191 >gi|329890899|ref|ZP_08269242.1| recombination protein RecR [Brevundimonas diminuta ATCC 11568] gi|328846200|gb|EGF95764.1| recombination protein RecR [Brevundimonas diminuta ATCC 11568] Length = 200 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 104/195 (53%), Positives = 142/195 (72%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +LA++PG GPRSARRA L L+K++EQLL PLA ++A +KV CS+CG+ Sbjct: 5 AGPEIERLISLLAKLPGMGPRSARRAALALLKRREQLLVPLAASLAETADKVVNCSVCGS 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 DT DPC++C DQ RD ++I VVE+ LWA+ERS A YHVLGG LS LD +GPE + Sbjct: 65 PDTRDPCSVCADQSRDNALICVVEEAGALWAMERSGAFRGKYHVLGGLLSALDGVGPEQL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI R + + +E++ A+ AT++GQTTAHY+ ++L V++T LA G+P+G ELD+ Sbjct: 125 RIAELIGRAKGGEAKEVVLALPATVDGQTTAHYLAERLSAAGVQVTSLARGVPVGGELDW 184 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI +A+R+R Sbjct: 185 LDDGTIIQALRARRP 199 >gi|119386355|ref|YP_917410.1| recombination protein RecR [Paracoccus denitrificans PD1222] gi|171704476|sp|A1B870|RECR_PARDP RecName: Full=Recombination protein recR gi|119376950|gb|ABL71714.1| recombination protein RecR [Paracoccus denitrificans PD1222] Length = 199 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 108/196 (55%), Positives = 132/196 (67%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +AR+PG GPRSARR LHL++++ + LA MAN+ C +CGN Sbjct: 4 AGDEIETLIATMARLPGLGPRSARRIVLHLIRRRTGQMAQLAGLMANVAEHARECLVCGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V +D C IC D R I VV DVADLWALER +A + YHVLGGSLS LD +GPED+ Sbjct: 64 VTGSDICPICEDPDRATGEICVVTDVADLWALERGRAFHGRYHVLGGSLSALDEVGPEDL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI RI + I E+I A+SAT+EGQTTAHYI + L V +T LA G+P+G ELDY Sbjct: 124 RIPQLIARIAEEGITEVILALSATVEGQTTAHYIAEALAPTGVAVTGLAQGVPIGGELDY 183 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R L Sbjct: 184 LDDGTITAALRARRKL 199 >gi|116495713|ref|YP_807447.1| recombination protein RecR [Lactobacillus casei ATCC 334] gi|191639201|ref|YP_001988367.1| recombination protein RecR [Lactobacillus casei BL23] gi|301067268|ref|YP_003789291.1| recombinational DNA repair protein [Lactobacillus casei str. Zhang] gi|122262885|sp|Q035W7|RECR_LACC3 RecName: Full=Recombination protein recR gi|238693007|sp|B3W9Z0|RECR_LACCB RecName: Full=Recombination protein recR gi|116105863|gb|ABJ71005.1| DNA replication and repair protein RecR [Lactobacillus casei ATCC 334] gi|190713503|emb|CAQ67509.1| Recombination protein recR [Lactobacillus casei BL23] gi|300439675|gb|ADK19441.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus casei str. Zhang] gi|327383279|gb|AEA54755.1| Recombination protein recR [Lactobacillus casei LC2W] gi|327386462|gb|AEA57936.1| Recombination protein recR [Lactobacillus casei BD-II] Length = 199 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG G ++A R + + + + A+++ + CSICGN Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ Sbjct: 63 ITDEDPCAICRDKSRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIESLLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ RT L Sbjct: 183 YADEMTLMKAVEGRTEL 199 >gi|242238467|ref|YP_002986648.1| recombination protein RecR [Dickeya dadantii Ech703] gi|242130524|gb|ACS84826.1| recombination protein RecR [Dickeya dadantii Ech703] Length = 201 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L+ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMDALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQDVCTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEARLATESISEVILATNPTVEGDATANYIAELCAEHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|254818509|ref|ZP_05223510.1| recombination protein RecR [Mycobacterium intracellulare ATCC 13950] Length = 203 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD S + VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSDNERCRICADPRRDGSQVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|315180752|gb|ADT87666.1| Recombinational DNA repair protein [Vibrio furnissii NCTC 11218] Length = 194 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 1/193 (0%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMVEIGHCSECRTFTEE 61 Query: 70 DPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ Sbjct: 62 EVCHICQNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLD 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R++ I E+I A + T+EG+ TAHYI + + DV +R+A+G+P+G EL+ +D Sbjct: 122 VLDFRLQRGGISEVILATNPTVEGEATAHYIAELCREHDVSASRIAHGVPVGGELELVDG 181 Query: 189 GTIFEAIRSRTVL 201 T+ ++ R L Sbjct: 182 TTLSHSLLGRQKL 194 >gi|183600057|ref|ZP_02961550.1| hypothetical protein PROSTU_03589 [Providencia stuartii ATCC 25827] gi|188022342|gb|EDU60382.1| hypothetical protein PROSTU_03589 [Providencia stuartii ATCC 25827] Length = 199 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + +I VVE AD++A+E++ + Y VL G LSPLD IGP D Sbjct: 63 FTEQEVCNICENPRRQQNGLICVVESPADIYAVEQTGQFSGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSSETIIEVILATNPTVEGEATANYIAQMCAQYGVAASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 MVDGTTLSHSLAGRQRL 199 >gi|323499525|ref|ZP_08104495.1| recombination protein RecR [Vibrio sinaloensis DSM 21326] gi|323315398|gb|EGA68439.1| recombination protein RecR [Vibrio sinaloensis DSM 21326] Length = 200 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCSECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKESQVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRQKL 199 >gi|260776400|ref|ZP_05885295.1| recombination protein RecR [Vibrio coralliilyticus ATCC BAA-450] gi|260607623|gb|EEX33888.1| recombination protein RecR [Vibrio coralliilyticus ATCC BAA-450] Length = 199 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCNECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEETCHICTNPKRQENGQICVVESPADIAAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ + E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDVSEVILATNPTVEGEATAHYIAELCKEHQVQASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRQKL 199 >gi|285017410|ref|YP_003375121.1| recombination protein recr [Xanthomonas albilineans GPE PC73] gi|283472628|emb|CBA15133.1| probable recombination protein recr [Xanthomonas albilineans] Length = 204 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 113/196 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI+ +PG G ++A+R H+++++ LA+ + +V C+ C Sbjct: 1 MSSPLLEQLIEAFRILPGVGQKTAQRMAYHVLERERAGGQRLADTLHAAIARVGHCTQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + TD CAIC RD + VVE AD A+E++ LY +L G LSPLD IGP + Sbjct: 61 DFSETDICAICASPGRDRQQLCVVESPADRLAIEQATGYRGLYFILQGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L R+ ++ ELI A ++T+EG+ TAHY+ + V+ +RLA G+P+G EL+ Sbjct: 121 LGLDRLGARLAQGEVAELIIATNSTVEGEATAHYLAQLARQHGVRPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ A SR Sbjct: 181 YVDRGTLSHAFGSRNE 196 >gi|227533728|ref|ZP_03963777.1| recombination protein RecR [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188712|gb|EEI68779.1| recombination protein RecR [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 216 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG G ++A R + + + + A+++ + CSICGN Sbjct: 20 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 79 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ Sbjct: 80 ITDEDPCAICRDKSRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 139 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 140 NIESLLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 199 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ RT L Sbjct: 200 YADEMTLMKAVEGRTEL 216 >gi|256848134|ref|ZP_05553578.1| recombination protein RecR [Lactobacillus coleohominis 101-4-CHN] gi|256715194|gb|EEU30171.1| recombination protein RecR [Lactobacillus coleohominis 101-4-CHN] Length = 199 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + E + ++A+ + + CSICGN Sbjct: 3 YPEPIAKLIASYMKLPGIGEKTATRLAFYTIGMDEDDVKDFSKALVAVKEDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC DQ RD + I+VVE+ D+ A+ER + LYHVL G++SP + GP DI Sbjct: 63 ITEDDPCPICKDQGRDQTTIVVVENSRDVMAMERMNEYHGLYHVLHGTISPSEGTGPMDI 122 Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SLIER++ +++E+I A +A+++G+TTA Y+ LK +K+TRLA+G+ G+++D Sbjct: 123 NIPSLIERLKKHSEVQEVIIATNASMDGETTAQYLAKLLKPAGIKVTRLAHGLSAGADID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 183 YTDEVTLFKAVQGRTEM 199 >gi|331005545|ref|ZP_08328919.1| Recombination protein RecR [gamma proteobacterium IMCC1989] gi|330420647|gb|EGG94939.1| Recombination protein RecR [gamma proteobacterium IMCC1989] Length = 218 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 119/218 (54%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ LI L +PG G +SA+R LHL+++ + G L A+ KV C C Sbjct: 1 MFSPLIDELIHSLCCLPGVGRKSAQRMALHLLERDPEGAGRLVGALGTAIEKVGRCLHCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC +Q+R+ ++ VVE AD+ A+E+S Y VL G LSP+D IGP++ Sbjct: 61 ILTEQPVCYICSNQRRNTGLLCVVETPADVVAIEQSGTYQGKYFVLNGRLSPIDGIGPKE 120 Query: 125 IGIQSLIERIEVKK---------------------IRELIFAISATIEGQTTAHYIMDKL 163 +G+ L +R+ ++ + ELI A + T+EG+ TA+YI ++ Sbjct: 121 LGLPQLFQRLRQEQQVTSQADEAEVEVEKDNANAPVTELILATNPTVEGEATAYYIAEQA 180 Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 + + ++R+A+G+P+G EL+Y+D GT+ A SR + Sbjct: 181 RQCGITVSRIAHGVPLGGELEYIDGGTLTHAFSSRRSI 218 >gi|290968133|ref|ZP_06559678.1| recombination protein RecR [Megasphaera genomosp. type_1 str. 28L] gi|290781808|gb|EFD94391.1| recombination protein RecR [Megasphaera genomosp. type_1 str. 28L] Length = 196 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 123/193 (63%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ L + R+PG G ++AR+ ++V++ ++ + A+ K+C CS C N+ + Sbjct: 4 PLDRLTEQFRRLPGIGIKTARKLAYYMVQEPQEKVNEFIHALQEAKQKMCFCSQCFNLSS 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC IC D++RD S+I VVE D+ A+ERS LYHVL G+LSPLD IG +++ I+ Sbjct: 64 QDPCPICSDRKRDRSMICVVETPQDVLAVERSGNYGGLYHVLQGALSPLDGIGADNLRIK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++R+E +I+E+I A +EG+ TA Y+ LK + +++TR+A G+P G +L+Y D+ Sbjct: 124 ELLQRLENTEIKEVIIATDPDVEGEATALYLARLLKPVPIRVTRIARGLPAGGDLEYADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 ATLAGAVANRLEM 196 >gi|199599029|ref|ZP_03212436.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus rhamnosus HN001] gi|258509259|ref|YP_003172010.1| recombination protein RecR [Lactobacillus rhamnosus GG] gi|258540443|ref|YP_003174942.1| recombination protein RecR [Lactobacillus rhamnosus Lc 705] gi|199590065|gb|EDY98164.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus rhamnosus HN001] gi|257149186|emb|CAR88159.1| Recombination protein recR [Lactobacillus rhamnosus GG] gi|257152119|emb|CAR91091.1| Recombination protein recR [Lactobacillus rhamnosus Lc 705] gi|259650541|dbj|BAI42703.1| recombination protein RecR [Lactobacillus rhamnosus GG] Length = 199 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG G ++A R + + + + A+++ + CSICGN Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ Sbjct: 63 ITDEDPCAICRDKNRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL++R++ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIESLLKRLKKNTAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ RT L Sbjct: 183 YADEMTLMKAVEGRTEL 199 >gi|260769013|ref|ZP_05877947.1| recombination protein RecR [Vibrio furnissii CIP 102972] gi|260617043|gb|EEX42228.1| recombination protein RecR [Vibrio furnissii CIP 102972] Length = 199 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMVEIGHCSECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICQNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R++ I E+I A + T+EG+ TAHYI + + DV +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDFRLQRGGISEVILATNPTVEGEATAHYIAELCREHDVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRQKL 199 >gi|229552946|ref|ZP_04441671.1| recombination protein RecR [Lactobacillus rhamnosus LMS2-1] gi|229313690|gb|EEN79663.1| recombination protein RecR [Lactobacillus rhamnosus LMS2-1] Length = 199 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG G ++A R + + + + A+++ + CSICGN Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC D+ RD S I+VVE D+ +++R++ + LYHVL G LSP++ GPED+ Sbjct: 63 ITDEDPCAICRDKNRDQSTILVVEQPKDVMSIDRAQDYHGLYHVLQGVLSPIEGRGPEDL 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL++R++ ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIESLLKRLKKNTAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ RT L Sbjct: 183 YADEMTLMKAVEGRTEL 199 >gi|255036664|ref|YP_003087285.1| recombination protein RecR [Dyadobacter fermentans DSM 18053] gi|254949420|gb|ACT94120.1| recombination protein RecR [Dyadobacter fermentans DSM 18053] Length = 204 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 124/201 (61%), Gaps = 4/201 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE + ++R+PG G ++A R LHL+K+ E+ L++A+ N+ K CS Sbjct: 1 MNYPSRLIEEAVAEISRLPGIGKKTALRLALHLLKRDEEQTRSLSDALLNMRTKTTYCSR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + +RD + I VV D D+ A+E + LYHVLGG +SPL+ IGP Sbjct: 61 CHNIADDTLCNICSNNKRDQATICVVVDTRDVLAIESTNQYRGLYHVLGGIISPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 D+ I SL+ RIE K+ +RE+I A+S T+EG TTA Y+ +LK + VKI+ +A GIP Sbjct: 121 SDLEIDSLMSRIEKKEGDEAVREVILALSPTMEGDTTAFYLQKRLKALGVKISTIARGIP 180 Query: 179 MGSELDYLDDGTIFEAIRSRT 199 +G +L+Y D+ T+ +I SR Sbjct: 181 IGGDLEYADEITLGRSIVSRV 201 >gi|332883359|gb|EGK03642.1| recombination protein recR [Dysgonomonas mossii DSM 22836] Length = 207 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 128/199 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +K +EN + A++PG G ++A R LHL+++ ++ A+A+ ++ ++V C Sbjct: 1 MNQKYPSALLENAVNEFAKLPGIGRKTALRLILHLLRQDNAMVEGFAQALVSLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C N+ D C IC+D+ RDA+ I VVE++ ++ A+E + LYHVLGG +SP+D I Sbjct: 61 NVCHNICDDDICPICLDKSRDAATICVVENIKEVMAIENTMQFKGLYHVLGGIISPIDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ ++E+I A+S T+EG TT YI KL D+K++ +A GI +G Sbjct: 121 GPSDLEIDSLVTRVAKGDVKEIILALSTTMEGDTTNFYIYKKLSSFDIKVSMIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEVTLGRSILNRT 199 >gi|253990860|ref|YP_003042216.1| recombination protein RecR [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639195|emb|CAR67808.1| Recombination protein recR [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782310|emb|CAQ85474.1| Recombination protein recR [Photorhabdus asymbiotica] Length = 201 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTKAMSEIGHCQYCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEQCTICANSRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA+YI D +V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSTEVISEVILATNPTVEGEATANYIADMCAQYEVTASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRQKI 199 >gi|109899202|ref|YP_662457.1| recombination protein RecR [Pseudoalteromonas atlantica T6c] gi|122971763|sp|Q15RT5|RECR_PSEA6 RecName: Full=Recombination protein recR gi|109701483|gb|ABG41403.1| recombination protein RecR [Pseudoalteromonas atlantica T6c] Length = 200 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 I LI +PG GP+SA+R HL+++ L++ + N V C C Sbjct: 4 SPLILELINAFKVLPGVGPKSAQRMAFHLLERNRSGALQLSQVLHNAMEHVGHCKQCRTF 63 Query: 67 DTTDPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 ++ C IC +R + VVE D+ A+E++ LY VL G LSP+D IGP +I Sbjct: 64 TESELCEICAHPRRSEAGTLCVVESPQDVVAIEQTAEFKGLYFVLMGHLSPIDGIGPSEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L ++ K + E+I A + T+EG+ TAHYI D++ TRLA+G+P+G EL+Y Sbjct: 124 GLDELANLLDSKDLTEVILATNPTVEGEATAHYIGQMCSARDIQATRLAHGMPVGGELEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A R L Sbjct: 184 VDGNTLTHAFVGRRSL 199 >gi|85707835|ref|ZP_01038901.1| recombinational DNA repair protein [Erythrobacter sp. NAP1] gi|85689369|gb|EAQ29372.1| recombinational DNA repair protein [Erythrobacter sp. NAP1] Length = 198 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 104/196 (53%), Positives = 142/196 (72%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +EIE L LAR+PG GPRSARRA L LVK +EQ L L EA+ + + C ICG Sbjct: 1 MASQEIEALSSALARLPGLGPRSARRAVLWLVKNREQALPALLEALDAVSETLVECQICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT+DPC IC D +RD + VVEDVAD+WAL+R++ YHVLGG LS LD IGP+D Sbjct: 61 NVDTSDPCGICADPRRDPKSLCVVEDVADVWALDRARLFQGRYHVLGGKLSALDGIGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL+ER ++ E++ A++AT+EGQTTAHY+ ++L ++IT+LA+G+P+G ELD Sbjct: 121 LNIASLMERAANGEVEEVVLAMNATLEGQTTAHYLAERLDEHKLRITQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|218261719|ref|ZP_03476454.1| hypothetical protein PRABACTJOHN_02122 [Parabacteroides johnsonii DSM 18315] gi|218223826|gb|EEC96476.1| hypothetical protein PRABACTJOHN_02122 [Parabacteroides johnsonii DSM 18315] Length = 207 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 123/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +K +EN + L+ +PG G ++A R LH++++ A A+ + V C Sbjct: 1 MNQKYPSVLLENAVNELSSLPGVGRKTALRLALHMLRRDVGYTEGFASALLALRRDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ + C+IC D QRD S++ VVE++ ++ A+E + +YHVLGG +SP+D I Sbjct: 61 KVCHNICDDNMCSICADHQRDHSMVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL++R+ +++E++ A+S T+EG TT +I KL DVKI+ +A G+ +G Sbjct: 121 GPGDLQIDSLVQRVAEGEVKEVVLALSTTMEGDTTNFFIYRKLSSYDVKISVIARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSIVNRTS 200 >gi|114770076|ref|ZP_01447614.1| recombination protein RecR [alpha proteobacterium HTCC2255] gi|114548913|gb|EAU51796.1| recombination protein RecR [alpha proteobacterium HTCC2255] Length = 198 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 103/200 (51%), Positives = 143/200 (71%), Gaps = 3/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++I+ LI ++A++PG GPRSARRA LHL+KK++ LL PL++A+ N+ C Sbjct: 1 MSN---NQDIDILIALMAKLPGLGPRSARRAVLHLIKKRDILLSPLSDAIYNVAQTAREC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+DT D C ICI+ +R I VVEDV+DLWA+ERS YHVLGG+LS LD I Sbjct: 58 LSCGNIDTKDICEICINSKRGNGQICVVEDVSDLWAMERSNVFKGRYHVLGGNLSALDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I L++R++ + I E+I A++AT++GQTTAHYI D+L +DV +T LA G+P+G Sbjct: 118 GPDELRIPHLVKRVKGENINEIILALNATVDGQTTAHYIADQLDEMDVAVTSLAQGVPIG 177 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLDDGTI A+ +R Sbjct: 178 GELDYLDDGTISAALNARKS 197 >gi|33863348|ref|NP_894908.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9313] gi|73621507|sp|Q7V6R9|RECR_PROMM RecName: Full=Recombination protein recR gi|33640797|emb|CAE21252.1| RecR protein [Prochlorococcus marinus str. MIT 9313] Length = 189 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I R+PG GPR+A+R LHL+++ E + A+A+ ++V C C ++ C Sbjct: 2 IDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLCD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC D +R ++ VV D DL ALER++ YHVLGG +SP+D IGP+ + I SLI+R Sbjct: 62 ICRDGKRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 ++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D+ T+ Sbjct: 122 VDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYADEVTLTR 180 Query: 194 AIRSRTVL 201 A+ R + Sbjct: 181 ALEGRRAM 188 >gi|197103837|ref|YP_002129214.1| recombination protein recR [Phenylobacterium zucineum HLK1] gi|229470333|sp|B4RDT6|RECR_PHEZH RecName: Full=Recombination protein recR gi|196477257|gb|ACG76785.1| recombination protein recR [Phenylobacterium zucineum HLK1] Length = 200 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 104/195 (53%), Positives = 143/195 (73%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +LA++PG GPRSARRA L L+K+++QLL PL++A+A +V CS CG+ Sbjct: 5 AGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCSTCGS 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +DT DPCAIC D RDAS+I VVE+V LWA+ER+ A YHVLGG LS LD +GP+ + Sbjct: 65 LDTQDPCAICSDGTRDASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVGPDAL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L+ R +RE+I A+ AT++GQTTAHY+ ++L G +V ++ LA G+P+G ELD+ Sbjct: 125 RVGPLVARASEPGVREVILALPATVDGQTTAHYLAERLAGAEVTVSMLARGVPVGGELDW 184 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI +A+R+R Sbjct: 185 LDDGTIAQAMRARRP 199 >gi|73541798|ref|YP_296318.1| recombination protein RecR [Ralstonia eutropha JMP134] gi|123624674|sp|Q46ZF9|RECR_RALEJ RecName: Full=Recombination protein recR gi|72119211|gb|AAZ61474.1| RecR protein [Ralstonia eutropha JMP134] Length = 204 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 4/204 (1%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K ++ LI+ L +PG GP+SA+R HL++ + L +A+ + + C+ Sbjct: 1 MKAAPPTSLQALIEALRVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAADHIRHCA 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C + C C+D +RD S++ VVE AD +E++ Y VL G LSPLD IG Sbjct: 61 RCNTFTEQEICETCLDDRRDGSILCVVETPADQIMIEQTLTYRGKYFVLMGRLSPLDGIG 120 Query: 122 PEDIGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 P++I + L+ R ++ E+I A + T EG+ TAHYI + LK +K++RLA G+ Sbjct: 121 PKEIHLDRLLARATDTEMGGPVGEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGV 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G EL+Y+D GTI A+ R L Sbjct: 181 PVGGELEYVDAGTIARAVMDRRNL 204 >gi|224539567|ref|ZP_03680106.1| hypothetical protein BACCELL_04474 [Bacteroides cellulosilyticus DSM 14838] gi|224518801|gb|EEF87906.1| hypothetical protein BACCELL_04474 [Bacteroides cellulosilyticus DSM 14838] Length = 205 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 126/199 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFSSILLEKAVSEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 RVCHNISDTETCRICANPQRDASTVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ R+ I+E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLQIESLVRRVAAGGIKEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYADEVTLGRSIVNRT 199 >gi|319441765|ref|ZP_07990921.1| recombination protein RecR [Corynebacterium variabile DSM 44702] Length = 214 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 16/213 (7%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++++I +R+PG GP+SA+R HL++ + + LA A+ + V C IC Sbjct: 1 MFEGPLQDVIDEFSRLPGVGPKSAQRIAFHLLQAEPTDVERLAGALTRLQQGVHFCRICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + D C IC D RDA+++ VVE+ D+ +ER+ YHVLGG+L PL+ IGP++ Sbjct: 61 NISSEDVCRICADSSRDATLVCVVEESKDIQVIERTGEYKGRYHVLGGALDPLNGIGPKE 120 Query: 125 IGIQSLIERI---------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DV 168 + + +L++RI + I E+I A EG+ TA Y+ LK + Sbjct: 121 LNVTALVQRIGGRVDDVPAADGTLPDAPDISEVIIATDPNTEGEATASYLGRLLKDFPGL 180 Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 ++RLA GIPMG +L+++D+ T+ A RT L Sbjct: 181 TVSRLASGIPMGGDLEFVDELTLSRAFEGRTPL 213 >gi|189500125|ref|YP_001959595.1| recombination protein RecR [Chlorobium phaeobacteroides BS1] gi|229890139|sp|B3EQT3|RECR_CHLPB RecName: Full=Recombination protein recR gi|189495566|gb|ACE04114.1| recombination protein RecR [Chlorobium phaeobacteroides BS1] Length = 204 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 133/204 (65%), Gaps = 5/204 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T IE LI+ A++PG G ++A+R ++H++++K + L+ A+ ++ KV CSI Sbjct: 1 MRYTSTAIEALIEEFAKLPGIGRKTAQRLSMHILQEKPGEVEKLSRALTDVKEKVISCSI 60 Query: 63 CGNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV DPC+IC + RD S I VVE D+ A E++ LYHVL G +SPLD + Sbjct: 61 CQNVTDRGDDPCSICRGKGRDLSKICVVESPPDVLAFEKTAQYRGLYHVLHGVISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIREL---IFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI ++ L+ R+ ++ RE+ I A+S T+EG+TT Y+ LK + +++T++A GI Sbjct: 121 GPDDIKVKELLARLSLQDGREVSEVIMALSPTVEGETTVLYVSRLLKPLGIEVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G+EL+Y+D+ T+ A+ R+VL Sbjct: 181 PVGAELEYIDEATLSRAMEGRSVL 204 >gi|256822250|ref|YP_003146213.1| recombination protein RecR [Kangiella koreensis DSM 16069] gi|256795789|gb|ACV26445.1| recombination protein RecR [Kangiella koreensis DSM 16069] Length = 199 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 118/196 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I+ LI+ +PG G +SA+R L+++ + LAEA+ N V CS C Sbjct: 1 MQSPLIKKLIEAFTCLPGVGNKSAQRMAYFLLERNREGGEQLAEALVAAMNGVKHCSRCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C IC Q RD S++ +VE AD++A+E + + Y VL G LSPLD IGPED Sbjct: 61 DFTEDDLCGICNSQARDNSLLCIVESPADVFAIESTASFKGKYFVLMGHLSPLDGIGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L ++ +K E+I A ++T+EG+ TAH+I + LK +V ++R+A G+P+G EL+ Sbjct: 121 LGLDQLKRLVDEEKPVEIILATNSTVEGEATAHFISEMLKKNEVVLSRIASGVPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ ++ R Sbjct: 181 YIDGGTLMHSLSGRQP 196 >gi|290580906|ref|YP_003485298.1| putative recombination protein [Streptococcus mutans NN2025] gi|254997805|dbj|BAH88406.1| putative recombination protein [Streptococcus mutans NN2025] Length = 199 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 1/198 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ ++PG G ++A R + + ++ + A+ + ++ C +CG Sbjct: 2 LYPTPIAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAAKRELTYCFVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD S ++VVED D+ A+E+ + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDDDPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 I ++SL+ R+ I E+I A +AT +G+ TA YI LK + +TRLA G+ +GS++ Sbjct: 122 INLKSLLTRLRDNSDIHEVIIATNATADGEATAMYISRVLKPAGITVTRLARGLAVGSDI 181 Query: 184 DYLDDGTIFEAIRSRTVL 201 +Y D+ T+ AI +RT L Sbjct: 182 EYADEVTLLRAIENRTEL 199 >gi|322388817|ref|ZP_08062414.1| recombination protein R [Streptococcus infantis ATCC 700779] gi|321140436|gb|EFX35944.1| recombination protein R [Streptococcus infantis ATCC 700779] Length = 198 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ YI LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYISRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|332992411|gb|AEF02466.1| recombination protein RecR [Alteromonas sp. SN2] Length = 199 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L +PG G +SA+R HL+++ + L+ + N + C C Sbjct: 3 FSPLLNELIQALTCLPGVGNKSAQRMAFHLLERNRKGAIDLSNVLHNAMEHIHHCQRCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+ Sbjct: 63 FTEDELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R I E+I A + T+EG+ TAHYI +V+ +R+A+G+P+G EL+ Sbjct: 123 IGLNELETRFSAGGINEVILATNPTVEGEATAHYIAQLCAAHNVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A R L Sbjct: 183 YIDGNTLTHAFSGRRKL 199 >gi|91775927|ref|YP_545683.1| recombination protein RecR [Methylobacillus flagellatus KT] gi|123254387|sp|Q1H0Z5|RECR_METFK RecName: Full=Recombination protein recR gi|91709914|gb|ABE49842.1| DNA replication and repair protein RecR [Methylobacillus flagellatus KT] Length = 199 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 119/194 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +E L++ L +PG GP+SA R +L+++ + G LA+++ V C++C N Sbjct: 3 NPPALEQLVEALRCLPGVGPKSALRMAYYLLQRDRKGAGILAKSLDQALQVVSHCNLCNN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C +C RD +++ +VE +DL LE+++ +Y VL G LSPLD IGP DI Sbjct: 63 FSEQEICPLCASPARDRTLLCIVEMPSDLMMLEQTQTYQGMYFVLMGRLSPLDGIGPRDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R + K+ E+I A + T+EG+ TAHY+ + L+ ++++R+A G+PMG E+++ Sbjct: 123 HLDKLLKRAQDGKVEEVILATNYTVEGEATAHYVSELLRARGIQVSRIARGLPMGGEIEH 182 Query: 186 LDDGTIFEAIRSRT 199 +D GT+ +A+ R Sbjct: 183 VDSGTLAQALLERR 196 >gi|41406414|ref|NP_959250.1| recombination protein RecR [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463085|ref|YP_879673.1| recombination protein RecR [Mycobacterium avium 104] gi|254773392|ref|ZP_05214908.1| recombination protein RecR [Mycobacterium avium subsp. avium ATCC 25291] gi|73621499|sp|Q744M5|RECR_MYCPA RecName: Full=Recombination protein recR gi|171472969|sp|A0Q9T5|RECR_MYCA1 RecName: Full=Recombination protein recR gi|41394763|gb|AAS02633.1| RecR [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164372|gb|ABK65269.1| recombination protein RecR [Mycobacterium avium 104] Length = 203 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L +A + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLARVRDGVRFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDASV+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSDDERCRICSDPRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|323493360|ref|ZP_08098483.1| recombination protein RecR [Vibrio brasiliensis LMG 20546] gi|323312446|gb|EGA65587.1| recombination protein RecR [Vibrio brasiliensis LMG 20546] Length = 199 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEDVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + K +V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDIAEVILATNPTVEGEATAHYIAELCKESNVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRQKL 199 >gi|37527699|ref|NP_931043.1| recombination protein RecR [Photorhabdus luminescens subsp. laumondii TTO1] gi|73621503|sp|Q7N0P2|RECR_PHOLL RecName: Full=Recombination protein recR gi|36787134|emb|CAE16211.1| Recombination protein RecR [Photorhabdus luminescens subsp. laumondii TTO1] Length = 201 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRNRSGGMRLAQALTRAMSEIGHCKYCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEQCTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ ++I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEDRLATEEISEVILATNPTVEGEATANYIAEICVQYGVTASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRQKI 199 >gi|333030036|ref|ZP_08458097.1| Recombination protein recR [Bacteroides coprosuis DSM 18011] gi|332740633|gb|EGJ71115.1| Recombination protein recR [Bacteroides coprosuis DSM 18011] Length = 205 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 124/200 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + + A+ + +V C Sbjct: 1 MNQQYPSVLLEKAVDEFSKLPGIGKKTAMRLVLHLLRQDKSAVESFGNAIITLKREVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ T+ C IC + QRD S++ +VE++ D+ A+E ++ +YHVLGG +SP+D I Sbjct: 61 QTCHNISDTESCQICSNPQRDHSLVCIVENIRDVMAIEATQQYRGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ IQSLI+R++ I+E+IFA+S T+EG TT YI KL+ V ++ L+ G+ +G Sbjct: 121 GPSDLEIQSLIDRVQAGGIKEVIFALSTTMEGDTTNFYIYRKLEKSGVDMSVLSRGVSVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL Y D+ T+ +I +RT Sbjct: 181 DELAYADEVTLGRSIVNRTK 200 >gi|298230137|ref|ZP_06963818.1| recombination protein RecR [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254424|ref|ZP_06978010.1| recombination protein RecR [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503416|ref|YP_003725356.1| recombination protein RecR [Streptococcus pneumoniae TCH8431/19A] gi|298239011|gb|ADI70142.1| recombination protein RecR [Streptococcus pneumoniae TCH8431/19A] Length = 198 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMPDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDEDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|119510774|ref|ZP_01629900.1| RecR protein [Nodularia spumigena CCY9414] gi|119464537|gb|EAW45448.1| RecR protein [Nodularia spumigena CCY9414] Length = 185 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 80/185 (43%), Positives = 120/185 (64%), Gaps = 1/185 (0%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76 + R+PG GP+SA+R LH++K+ E + LA+A+ + ++ LCS+C ++ C IC Sbjct: 1 MQRLPGVGPKSAQRLALHILKRPEAEVEALAQALIDAKKQIGLCSVCFHLSADPVCEICR 60 Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136 RD + I VV D DL ALE+++ YHVLGG +SP+D IGPE + IQ+L+ R+ Sbjct: 61 HPNRDDTSICVVADSRDLIALEKTREYKGKYHVLGGVISPMDGIGPEQLTIQALVRRVSQ 120 Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196 +K +E+I AIS TIEG+TT YI LK K+TR+A+G+P+G +L+Y D+ T+ A+ Sbjct: 121 QKTQEVIMAISPTIEGETTTLYIGQLLKPF-TKVTRIAFGLPVGGDLEYADEVTLARALE 179 Query: 197 SRTVL 201 R L Sbjct: 180 GRREL 184 >gi|302878406|ref|YP_003846970.1| recombination protein RecR [Gallionella capsiferriformans ES-2] gi|302581195|gb|ADL55206.1| recombination protein RecR [Gallionella capsiferriformans ES-2] Length = 196 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI L +PG GP+SA+R HL+++ + LA ++ V CS C Sbjct: 1 MALSYLDELISALRCLPGVGPKSAQRMAYHLLQRDRKGALHLATSLERAAENVQHCSRCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N C +C RD S++ VVE AD +E+++ +Y+VL G LSPLD IG ++ Sbjct: 61 NFSELPVCGLCASAARDESLLCVVEMPADQLMIEQTQCFRGMYYVLMGRLSPLDGIGAKE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + +L+ R++ E+I A + T+EG TAHY+ L+ + VK++R+A G+P+G EL+ Sbjct: 121 LQLDNLVRRVQQHPC-EVILATNFTVEGDATAHYLATLLQSLGVKVSRIARGLPVGGELE 179 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ +A+ R L Sbjct: 180 QVDSGTLAQAVLERREL 196 >gi|78779491|ref|YP_397603.1| DNA replication and repair protein RecR [Prochlorococcus marinus str. MIT 9312] gi|123554087|sp|Q31AC8|RECR_PROM9 RecName: Full=Recombination protein recR gi|78712990|gb|ABB50167.1| DNA replication and repair protein RecR [Prochlorococcus marinus str. MIT 9312] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 123/196 (62%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFVLKQPESTIRDFSKALLEAHSNVGRCKKCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + Sbjct: 64 FTSEDECEICKNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 183 VDEVTLARALEGRTKL 198 >gi|190149343|ref|YP_001967868.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307262657|ref|ZP_07544286.1| hypothetical protein appser13_850 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914474|gb|ACE60726.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871985|gb|EFN03700.1| hypothetical protein appser13_850 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 221 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENLI+ L +PG GP+SA+R HL+++ L++A+ + C C Sbjct: 24 SPLLENLIEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 83 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +I Sbjct: 84 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 143 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ Sbjct: 144 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 203 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 204 VDGTTLSHSFAGRRDI 219 >gi|253999386|ref|YP_003051449.1| recombination protein RecR [Methylovorus sp. SIP3-4] gi|313201408|ref|YP_004040066.1| recombination protein RecR [Methylovorus sp. MP688] gi|253986065|gb|ACT50922.1| recombination protein RecR [Methylovorus sp. SIP3-4] gi|312440724|gb|ADQ84830.1| recombination protein RecR [Methylovorus sp. MP688] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 115/195 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +E L++ L +PG GP+SA R HL+++ LA+A+ N V CS+C Sbjct: 3 NPPALEQLVESLRCLPGVGPKSALRMAYHLLQRDRSGANGLAQALHNALQVVTHCSLCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C +C RD +++ VVE DL LE+++ Y VL G LSPLD IGP++I Sbjct: 63 FSEDIVCPLCAADNRDPTLLCVVEMPTDLMMLEQTRVFQGRYFVLMGKLSPLDGIGPKEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L++R + + E++ A + T+EG+ TAHYI + L+ +K++R+A G+PMG E+++ Sbjct: 123 HLEKLLKRAQDGVVEEVVLATNYTVEGEATAHYISELLRSRGLKVSRIARGLPMGGEIEH 182 Query: 186 LDDGTIFEAIRSRTV 200 +D GT+ +A+ R Sbjct: 183 VDSGTLAQALMERRS 197 >gi|300721960|ref|YP_003711240.1| gap repair protein [Xenorhabdus nematophila ATCC 19061] gi|297628457|emb|CBJ89022.1| gap repair protein with type I DNA topoisomerase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus nematophila ATCC 19061] Length = 202 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCQYCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEQCAICANPRRQQNRQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSAEILSEIILATNPTVEGEATANYIAEMCSQYGVTASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLLGRQKI 199 >gi|294141552|ref|YP_003557530.1| recombination protein RecR [Shewanella violacea DSS12] gi|293328021|dbj|BAJ02752.1| recombination protein RecR [Shewanella violacea DSS12] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + L +A+ + V C C Sbjct: 3 FSPLVDELIQALKCLPGVGPKSAQRMAFQLLERDRKAGQSLGQALEKAMSDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R S +I VVE AD+ A+E + Y VL G LSPLD +GP++ Sbjct: 63 FTEEVHCPICASHKRGQSQLICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L E + ++ ELI A + T+EG TAH+I D K DV ++R+A+G+P+G EL+ Sbjct: 123 LGLALLEEHLASGEVSELILATNPTVEGDATAHFIADMAKIHDVIVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|256419940|ref|YP_003120593.1| recombination protein RecR [Chitinophaga pinensis DSM 2588] gi|256034848|gb|ACU58392.1| recombination protein RecR [Chitinophaga pinensis DSM 2588] Length = 205 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 121/197 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + IEN + AR+PG G ++A R LHL+K+ + E + + ++ C +C Sbjct: 3 FSSALIENAVNEFARLPGIGKKTALRLVLHLLKQDPAQVKLFGEVVTRMREQIKFCKVCH 62 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C+IC R+ +++ VVE++ D+ A+E ++ N +YHVLGG +SP+D IGPE Sbjct: 63 NVSDQEVCSICSSPSRNKALVCVVENIRDVMAIENTQQFNGVYHVLGGIISPIDGIGPEQ 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL++R++ + I E+I A+S TIEG TT +Y+ KLK KIT +A GI G EL+ Sbjct: 123 LNIYSLVDRVQQQGIDEIIMALSPTIEGDTTIYYLSKKLKEFPCKITTIARGIAFGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +I +R L Sbjct: 183 YADEMTLARSISNRLPL 199 >gi|293374917|ref|ZP_06621215.1| recombination protein RecR [Turicibacter sanguinis PC909] gi|325844363|ref|ZP_08168118.1| recombination protein RecR [Turicibacter sp. HGF1] gi|292646466|gb|EFF64478.1| recombination protein RecR [Turicibacter sanguinis PC909] gi|325489168|gb|EGC91551.1| recombination protein RecR [Turicibacter sp. HGF1] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 86/197 (43%), Positives = 128/197 (64%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVK-KKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI+ L+++PG G ++A R +++ KE + A+A+ + ++ C ICG Sbjct: 3 YPQPITKLIESLSKLPGIGNKTAERLAFYVISSMKEDDVTTFAKALIDSKRQLFKCPICG 62 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ TDPC+IC D RD S+I VV+D D+ A+ER + LYHVL G LSPLD +GPED Sbjct: 63 HITDTDPCSICSDSHRDRSLIAVVQDPKDVIAIERMRGFKGLYHVLNGVLSPLDGMGPED 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI +LIER++ + ++ELI A+SAT+EG T+ YI LK DVK+TR+A G+ MG ++ Sbjct: 123 IGIPALIERLKDENVKELILALSATLEGDATSQYIAKLLKNTDVKVTRIARGLEMGRSIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 183 YADEVTLIRALEGRREL 199 >gi|88812991|ref|ZP_01128234.1| recombination protein RecR [Nitrococcus mobilis Nb-231] gi|88789769|gb|EAR20893.1| recombination protein RecR [Nitrococcus mobilis Nb-231] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 2/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + LI+ L +PG GP+SA+R H++++ + LA +A KV C Sbjct: 1 MAE--FSPLVSELIEALRCLPGVGPKSAQRMAFHILQRDREGGMRLARVLAEAVAKVGEC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + C IC +RD S + +VE+ AD++AL+++ + LY VL G LSPLD I Sbjct: 59 RYCRILTEQALCTICSSGKRDRSTLCIVENPADVYALDQATDYSGLYFVLKGRLSPLDGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++G+ L +R +IRE++ A ++T+EG+ TA +I + + ++R+AYG+P+G Sbjct: 119 GPAELGLDCLEKRFCEGEIREIVLATNSTVEGEATAQFIAEMAYNNAIHVSRIAYGVPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y+D GT+ A R Sbjct: 179 GELEYVDSGTLSHAFAGRRE 198 >gi|225872190|ref|YP_002753645.1| recombination protein RecR [Acidobacterium capsulatum ATCC 51196] gi|254790744|sp|C1F111|RECR_ACIC5 RecName: Full=Recombination protein recR gi|225793113|gb|ACO33203.1| recombination protein RecR [Acidobacterium capsulatum ATCC 51196] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 124/194 (63%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + + LI+ L ++PG G RSA+R H+++ LA A+ ++ ++ LCS+C N+ Sbjct: 6 EPMARLIEELRKLPGIGTRSAQRLAFHILRSSTADAEALAGAVRDLKAQLRLCSVCNNIT 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC C R+ ++ VVE+ ++ A+E+++ N +YHVL G+LSPL +GPE + Sbjct: 66 DVDPCVFCSSPTRNQRLVCVVEEPTNIAAVEKTRGYNGVYHVLHGTLSPLHGVGPEHLRT 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 +L+ R+E ++ ELI A S T+EG+ TA+Y+ D L+ + V++TR+A G+P GS+++Y+D Sbjct: 126 VNLLARVERGEVDELILATSPTVEGEATANYLADLLRPLRVRLTRIATGVPAGSDIEYVD 185 Query: 188 DGTIFEAIRSRTVL 201 + T+ A+ R L Sbjct: 186 EVTMTRALEGRREL 199 >gi|123968736|ref|YP_001009594.1| recombination protein RecR [Prochlorococcus marinus str. AS9601] gi|166221953|sp|A2BRS6|RECR_PROMS RecName: Full=Recombination protein recR gi|123198846|gb|ABM70487.1| RecR protein [Prochlorococcus marinus str. AS9601] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + ++A+ +N V C C N Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSKALLEAHNNVGRCKKCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + Sbjct: 64 LTSEDECEICRNTERNQKLICVVSETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLSPF-TKVTRIAYGLPMGSELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 183 VDEVTLARALEGRTKL 198 >gi|83720219|ref|YP_442742.1| recombination protein RecR [Burkholderia thailandensis E264] gi|167581689|ref|ZP_02374563.1| recombination protein RecR [Burkholderia thailandensis TXDOH] gi|167619806|ref|ZP_02388437.1| recombination protein RecR [Burkholderia thailandensis Bt4] gi|257138953|ref|ZP_05587215.1| recombination protein RecR [Burkholderia thailandensis E264] gi|123536826|sp|Q2SWF7|RECR_BURTA RecName: Full=Recombination protein recR gi|83654044|gb|ABC38107.1| recombination protein RecR [Burkholderia thailandensis E264] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MSIK-PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 60 EKCNTFTEAQVCEVCCDPERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 180 GELEYVDAGTIARAMLDRRTL 200 >gi|302381705|ref|YP_003817528.1| recombination protein RecR [Brevundimonas subvibrioides ATCC 15264] gi|302192333|gb|ADK99904.1| recombination protein RecR [Brevundimonas subvibrioides ATCC 15264] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 104/195 (53%), Positives = 141/195 (72%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +LA++PG GPRSARRA L L+KK+EQLL PLA ++A KV CSICG Sbjct: 5 AGPEIERLIALLAKLPGLGPRSARRAALALLKKREQLLEPLAASLAETAAKVVSCSICGT 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 DT DPC+IC D RD +I VVE+ LWA+ERS A YHVLGG LS LD +GPE + Sbjct: 65 PDTRDPCSICSDGARDNGLICVVEEAGSLWAMERSGAFRGKYHVLGGLLSALDGVGPEAL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L+ R++ ++RE++ A+ AT++GQTTAHY+ +++ G V++T LA G+P+G +LD+ Sbjct: 125 RVAELVGRVKGGEVREVVLALPATVDGQTTAHYLAERVAGNGVEVTSLARGVPVGGDLDW 184 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI +A+R+R Sbjct: 185 LDDGTIVQALRARRP 199 >gi|297182625|gb|ADI18783.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 201 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 128/191 (67%), Gaps = 2/191 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 KEIE LIKI++++PG GP+SA+R L L+ +++L PL +A +Y V C +CGN+ Sbjct: 7 KEIEELIKIISKLPGLGPKSAKRIVLKLINNRDELAKPLVNTLAQVYKNVIRCKVCGNLK 66 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + + C + ++ I VVE++AD+W ++ S YH+LGG+L L+ + + + Sbjct: 67 SANSNCTCSN--KNYDQICVVENIADMWVIQSSGIYKGHYHILGGTLPSLESKKDDGLLV 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LD Sbjct: 125 SSLVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGLPVGGEIEFLD 184 Query: 188 DGTIFEAIRSR 198 DGT+F A ++R Sbjct: 185 DGTLFSAFKNR 195 >gi|239630118|ref|ZP_04673149.1| recombination protein recR [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527730|gb|EEQ66731.1| recombination protein recR [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI R+PG G ++A R + + + + A+++ + CSICGN Sbjct: 3 YPEPISKLIDSYMRLPGIGAKTATRLAFYTIDMNKDDVTAFAKSLVAAKEDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC D+ RD S I+VVE D+ ++R++ + LYHVL G LSP++ GPED+ Sbjct: 63 ITDEDPCAICRDKSRDQSTILVVEQPKDVMIIDRAQDYHGLYHVLHGVLSPIEGRGPEDL 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL++R++ K ++E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIESLLKRLKANKAVKEVIIATNATPEGEATAQYLARLIKPAGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A+ RT L Sbjct: 183 YADEMTLMKAVEGRTEL 199 >gi|224024429|ref|ZP_03642795.1| hypothetical protein BACCOPRO_01154 [Bacteroides coprophilus DSM 18228] gi|224017651|gb|EEF75663.1| hypothetical protein BACCOPRO_01154 [Bacteroides coprophilus DSM 18228] Length = 226 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 125/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ + + + AM + ++V C Sbjct: 22 MNQQYPSALLEKAVGEFAKLPGIGRKTAMRLVLHLLRQSTESVEAFSSAMVTLKHEVKYC 81 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC + RDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 82 KVCHNISDTDICRICSNPSRDASTVCVVENIRDVMAVENTQQYKGLYHVLGGVISPMDGI 141 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ ++E+I A+S+T+EG TT +I KL G DVK+T +A GI +G Sbjct: 142 GPSDLQIDSLVARVRSGAVKEVILALSSTMEGDTTNFFIYRKLSGFDVKLTVIARGISIG 201 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +R Sbjct: 202 DELEYTDEVTLGRSIVNRV 220 >gi|85058669|ref|YP_454371.1| recombination protein RecR [Sodalis glossinidius str. 'morsitans'] gi|123519908|sp|Q2NV59|RECR_SODGM RecName: Full=Recombination protein recR gi|84779189|dbj|BAE73966.1| recombination protein RecR [Sodalis glossinidius str. 'morsitans'] Length = 201 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L + L +PG GP+SA+R HL+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLEALTEALRCLPGVGPKSAQRMVFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC + +R S I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQPVCTICANPRRQQSGQICVVESPADIHAIEQTGQFAGSYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLGRLQERLENESIEEVILATNPTVEGEATANYIAEMCAHYGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|262200016|ref|YP_003271225.1| recombination protein RecR [Haliangium ochraceum DSM 14365] gi|262083363|gb|ACY19332.1| recombination protein RecR [Haliangium ochraceum DSM 14365] Length = 201 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 122/198 (61%), Gaps = 5/198 (2%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I+ L++ LAR+PG G ++A R HL++ + LA+ + + + LCS+C N+ Sbjct: 4 PIKRLVQHLARLPGIGEKTATRLAFHLIRSPASQVKDLAQTLVEVIEQTVLCSVCANITQ 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC IC D R+AS I VV + +D+ A++R +HVL G LSPL+ IGPED+ I Sbjct: 64 DDPCVICRDPGREASAICVVSNPSDVVAIDRGGHFRGRFHVLHGVLSPLEGIGPEDLRID 123 Query: 129 SLIERIE-----VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 L++R++ +I E+I A SA +EG+ TA Y+ +K ++++++R+A GIP+G EL Sbjct: 124 ELLKRLQTPAAGEPEIDEIIVATSANVEGEATAMYLARLIKPLNIRVSRIASGIPVGGEL 183 Query: 184 DYLDDGTIFEAIRSRTVL 201 +Y D TI A+ R+ L Sbjct: 184 EYSDQATIARALAGRSPL 201 >gi|227874528|ref|ZP_03992694.1| recombination protein RecR [Oribacterium sinus F0268] gi|227839624|gb|EEJ50088.1| recombination protein RecR [Oribacterium sinus F0268] Length = 198 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K+++ L++ L+R+PG GP+SA+R L+ +++ LA+++ + + C Sbjct: 1 MEYFSKDMDRLVQELSRLPGIGPKSAQRLAYFLINGEKEQAYALADSIKKARDSIRYCKC 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C +C +R+ I+VVE+ D+ A ER +YHVL G++SPL IGP Sbjct: 61 CCTLTDGELCPVCSSAERNHKQIMVVENPRDMSAYERVGKYQGVYHVLHGAISPLLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ L+ R+ ++ E+I A ++++EG+TTA YI +K + V ++R+A G+P+G + Sbjct: 121 EDIRLKELMVRL-QGEVEEVIIATNSSLEGETTASYITKLIKPLGVPLSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 ++ +D+ T+ A+ R L Sbjct: 180 IENIDEITLLRALDGRVSL 198 >gi|187928131|ref|YP_001898618.1| recombination protein RecR [Ralstonia pickettii 12J] gi|187725021|gb|ACD26186.1| recombination protein RecR [Ralstonia pickettii 12J] Length = 206 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L++ L +PG GP+SA+R HL++ + LA+A++ + CS C Sbjct: 7 TPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 66 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 67 FTEQEVCETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K TRLA G+P+G Sbjct: 127 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 186 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206 >gi|167562531|ref|ZP_02355447.1| recombination protein RecR [Burkholderia oklahomensis EO147] gi|167569717|ref|ZP_02362591.1| recombination protein RecR [Burkholderia oklahomensis C6786] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MSIK-PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 60 EKCNTFTEAQICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 180 GELEYVDAGTIARAMLDRRTL 200 >gi|116333251|ref|YP_794778.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus brevis ATCC 367] gi|122270061|sp|Q03SS5|RECR_LACBA RecName: Full=Recombination protein recR gi|116098598|gb|ABJ63747.1| DNA replication and repair protein RecR [Lactobacillus brevis ATCC 367] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G +SA R + E + ++A+ + CSICGN Sbjct: 3 YPEPIAQLIDGYMKLPGIGQKSATRLAFFTIDMAEDDVTAFSKALIAAKRDLHFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC+IC D+ RD + ++VVE D+ +E+ K + LYHVL G +SP++ GPED+ Sbjct: 63 ITEGDPCSICADKTRDQTHVLVVEQPKDIMVMEKMKEYHGLYHVLHGVMSPIEGKGPEDL 122 Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SLI R++ I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++ Sbjct: 123 NIASLINRLQQNPNIKEVIIATNATPEGEATAMYLSRLIKPAGIKVTRLAHGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A+ RT + Sbjct: 183 YADEMTLFKAVEGRTEM 199 >gi|296166809|ref|ZP_06849227.1| recombination protein R [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897825|gb|EFG77413.1| recombination protein R [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 203 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAALGKVRDGVRFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD S++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSDNERCRICSDPRRDGSLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + I E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLSRIGERVDDVDIAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|124022680|ref|YP_001016987.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9303] gi|171769768|sp|A2C8B2|RECR_PROM3 RecName: Full=Recombination protein recR gi|123962966|gb|ABM77722.1| RecR protein [Prochlorococcus marinus str. MIT 9303] Length = 189 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 116/188 (61%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I R+PG GPR+A+R LHL+++ E + AEA+ ++V C C ++ C Sbjct: 2 IDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLCD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC D R ++ VV D DL ALER++ YHVLGG +SP+D IGP+ + I SLI+R Sbjct: 62 ICRDGTRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 ++ I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y D+ T+ Sbjct: 122 VDRDGISEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYGLPVGSELEYADEVTLTR 180 Query: 194 AIRSRTVL 201 A+ R + Sbjct: 181 ALEGRRAM 188 >gi|126439985|ref|YP_001059239.1| recombination protein RecR [Burkholderia pseudomallei 668] gi|126452036|ref|YP_001066506.1| recombination protein RecR [Burkholderia pseudomallei 1106a] gi|134277460|ref|ZP_01764175.1| recombination protein RecR [Burkholderia pseudomallei 305] gi|167815437|ref|ZP_02447117.1| recombination protein RecR [Burkholderia pseudomallei 91] gi|167823847|ref|ZP_02455318.1| recombination protein RecR [Burkholderia pseudomallei 9] gi|167845388|ref|ZP_02470896.1| recombination protein RecR [Burkholderia pseudomallei B7210] gi|167893931|ref|ZP_02481333.1| recombination protein RecR [Burkholderia pseudomallei 7894] gi|167902383|ref|ZP_02489588.1| recombination protein RecR [Burkholderia pseudomallei NCTC 13177] gi|167918648|ref|ZP_02505739.1| recombination protein RecR [Burkholderia pseudomallei BCC215] gi|217421382|ref|ZP_03452886.1| recombination protein RecR [Burkholderia pseudomallei 576] gi|226197313|ref|ZP_03792890.1| recombination protein RecR [Burkholderia pseudomallei Pakistan 9] gi|237812563|ref|YP_002897014.1| recombination protein RecR [Burkholderia pseudomallei MSHR346] gi|242316061|ref|ZP_04815077.1| recombination protein RecR [Burkholderia pseudomallei 1106b] gi|254179536|ref|ZP_04886135.1| recombination protein RecR [Burkholderia pseudomallei 1655] gi|254197692|ref|ZP_04904114.1| recombination protein RecR [Burkholderia pseudomallei S13] gi|166918737|sp|A3NA68|RECR_BURP6 RecName: Full=Recombination protein recR gi|171855121|sp|A3NVY5|RECR_BURP0 RecName: Full=Recombination protein recR gi|172045976|sp|Q63UU6|RECR_BURPS RecName: Full=Recombination protein recR gi|126219478|gb|ABN82984.1| recombination protein RecR [Burkholderia pseudomallei 668] gi|126225678|gb|ABN89218.1| recombination protein RecR [Burkholderia pseudomallei 1106a] gi|134251110|gb|EBA51189.1| recombination protein RecR [Burkholderia pseudomallei 305] gi|169654433|gb|EDS87126.1| recombination protein RecR [Burkholderia pseudomallei S13] gi|184210076|gb|EDU07119.1| recombination protein RecR [Burkholderia pseudomallei 1655] gi|217395124|gb|EEC35142.1| recombination protein RecR [Burkholderia pseudomallei 576] gi|225930692|gb|EEH26702.1| recombination protein RecR [Burkholderia pseudomallei Pakistan 9] gi|237506041|gb|ACQ98359.1| recombination protein RecR [Burkholderia pseudomallei MSHR346] gi|242139300|gb|EES25702.1| recombination protein RecR [Burkholderia pseudomallei 1106b] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MSIK-PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 60 EKCNTFTEAQVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 180 GELEYVDAGTIARAMLDRRTL 200 >gi|255319564|ref|ZP_05360777.1| recombination protein RecR [Acinetobacter radioresistens SK82] gi|262379862|ref|ZP_06073018.1| recombination protein RecR [Acinetobacter radioresistens SH164] gi|255303362|gb|EET82566.1| recombination protein RecR [Acinetobacter radioresistens SK82] gi|262299319|gb|EEY87232.1| recombination protein RecR [Acinetobacter radioresistens SH164] Length = 198 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + L++ L +P GP+SA+R LHL+ K + LA A+ + + C +C Sbjct: 1 MFSERFDQLVQALRILPSVGPKSAQRMALHLLMKNREGASGLAHALNEATSYIHECKVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC +RD + VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTENEVCDICASSERDEQQLCVVESPADVMAIEQSGSFKGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L+ R+ I E+I A +AT+EGQ TAHY+ + K + + +TR+A G+P G EL+ Sbjct: 121 IGIPYLVRRLSEGHITEVILATNATVEGQATAHYLAEATKHLPLHLTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQALHNRMRI 197 >gi|126696542|ref|YP_001091428.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9301] gi|166221952|sp|A3PDK2|RECR_PROM0 RecName: Full=Recombination protein recR gi|126543585|gb|ABO17827.1| RecR protein [Prochlorococcus marinus str. MIT 9301] Length = 199 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIREFSKALLEAHSNVGRCKKCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + D C IC + +R+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + Sbjct: 64 LTSEDECEICRNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 183 VDEVTLARALEGRTKL 198 >gi|71906447|ref|YP_284034.1| recombination protein RecR [Dechloromonas aromatica RCB] gi|123628051|sp|Q47HW7|RECR_DECAR RecName: Full=Recombination protein recR gi|71846068|gb|AAZ45564.1| RecR protein [Dechloromonas aromatica RCB] Length = 199 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 113/195 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +E+LI+ L +PG GP+SA+R HL+++ L +A+ + + C C Sbjct: 1 MNPSGLESLIEALRCLPGIGPKSAQRMAYHLLQRDRPGAQRLGDAVLHALQAIRHCQRCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C C +RD ++ VVE D+ +E++ +Y+VL G +SPLD +GP++ Sbjct: 61 TFTEGDICERCASPRRDPELLCVVETPVDMNMMEQTLTYRGMYYVLMGKISPLDGVGPKE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L+ R ++E+I A + T EG+ TAHYI LK V +TR+A G+P+G EL+ Sbjct: 121 LGLDRLMTRALDGVVKEVILATNYTNEGEATAHYITAMLKPKGVGVTRIARGVPVGGELE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y+D GT+ +A+R R Sbjct: 181 YVDSGTLAQALRERK 195 >gi|53713342|ref|YP_099334.1| recombination protein RecR [Bacteroides fragilis YCH46] gi|60681587|ref|YP_211731.1| recombination protein RecR [Bacteroides fragilis NCTC 9343] gi|253565320|ref|ZP_04842775.1| recombination protein recR [Bacteroides sp. 3_2_5] gi|255008967|ref|ZP_05281093.1| recombination protein RecR [Bacteroides fragilis 3_1_12] gi|265763415|ref|ZP_06091983.1| recombination protein RecR [Bacteroides sp. 2_1_16] gi|73621459|sp|Q5LDK8|RECR_BACFN RecName: Full=Recombination protein recR gi|73621460|sp|Q64UM9|RECR_BACFR RecName: Full=Recombination protein recR gi|52216207|dbj|BAD48800.1| recombination protein RecR [Bacteroides fragilis YCH46] gi|60493021|emb|CAH07801.1| putative RecR-family recombination protein [Bacteroides fragilis NCTC 9343] gi|251945599|gb|EES86006.1| recombination protein recR [Bacteroides sp. 3_2_5] gi|263256023|gb|EEZ27369.1| recombination protein RecR [Bacteroides sp. 2_1_16] gi|301163145|emb|CBW22694.1| putative RecR-family recombination protein [Bacteroides fragilis 638R] Length = 205 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 126/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ ++ ++ + ++V C Sbjct: 1 MNQQYPSTLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTSVVEAFGSSIITLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS++ VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 61 KVCHNISDTETCQICANPQRDASMVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ LA G+ +G Sbjct: 121 GPGDLQIESLVRRVAEGGINEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVLARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEITLGRSIVNRTT 200 >gi|193212498|ref|YP_001998451.1| recombination protein RecR [Chlorobaculum parvum NCIB 8327] gi|229890138|sp|B3QMU8|RECR_CHLP8 RecName: Full=Recombination protein recR gi|193085975|gb|ACF11251.1| recombination protein RecR [Chlorobaculum parvum NCIB 8327] Length = 204 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 129/202 (63%), Gaps = 5/202 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + +E LI+ A++PG G ++A+R T+H+++++ + LA A+ ++ KV CSI Sbjct: 1 MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSI 60 Query: 63 CGNVDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ TDPC +C RD SVI VVE ++ A E++ LYHVL G +SPLD + Sbjct: 61 CQNITDLGTDPCLLCTSTGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKI---RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI ++ L+ RI RE++ A++ T+EG+TT+ YI LK + + +TR+A GI Sbjct: 121 GPDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 P+G+EL+++D+ T+ A+ R+ Sbjct: 181 PVGAELEFIDEATLSRAMDGRS 202 >gi|94311065|ref|YP_584275.1| recombination protein RecR [Cupriavidus metallidurans CH34] gi|172046202|sp|Q1LLH0|RECR_RALME RecName: Full=Recombination protein recR gi|93354917|gb|ABF09006.1| gap repair protein [Cupriavidus metallidurans CH34] Length = 204 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R HL++ + L +A+ + + C+ C Sbjct: 5 PPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCTRCNT 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C C D +RDA+++ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 65 FTELEICGTCSDPERDATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIGPKEI 124 Query: 126 GIQSLIERIEVKK----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 + L+ R + E+I A + T EG+ TAHYI + LK +K++RLA G+P+G Sbjct: 125 HLDRLLARATDPELGGPASEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGVPVGG 184 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 185 ELEYVDAGTIARAVMDRRTL 204 >gi|255532916|ref|YP_003093288.1| recombination protein RecR [Pedobacter heparinus DSM 2366] gi|255345900|gb|ACU05226.1| recombination protein RecR [Pedobacter heparinus DSM 2366] Length = 205 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 117/198 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E+ + +++PG G ++A R LHL+ K+++ + + + ++ CS+ Sbjct: 1 MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVDHFGNVLIRLRKEIKHCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC +R+ +I VVED D+ A+E + +YHVLGG +SP+D IGP Sbjct: 61 CHNISDQHTCNICTAGKREKELICVVEDTRDVMAVENTGQYFGVYHVLGGLISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ I SL++R+ ++E+I A+SAT+EG TT Y+ +LK + IT +A GI G E Sbjct: 121 SDLFIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ +I +R Sbjct: 181 LEYADEITLGRSIVTRVP 198 >gi|241662734|ref|YP_002981094.1| recombination protein RecR [Ralstonia pickettii 12D] gi|240864761|gb|ACS62422.1| recombination protein RecR [Ralstonia pickettii 12D] Length = 206 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L++ L +PG GP+SA+R HL++ + LA+A++ + CS C Sbjct: 7 TPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 66 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 67 FTEQDICETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K TRLA G+P+G Sbjct: 127 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 186 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206 >gi|227496712|ref|ZP_03926987.1| recombination protein RecR [Actinomyces urogenitalis DSM 15434] gi|226833777|gb|EEH66160.1| recombination protein RecR [Actinomyces urogenitalis DSM 15434] Length = 201 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 120/199 (60%), Gaps = 2/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +++LI ++PG GP+SA+R H++ + L EA+ + +V C Sbjct: 1 MP-AVYEGAVQDLIDEFGQLPGIGPKSAQRLAFHVLSADSSSVERLIEALRAVKARVRFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+ ++ CAIC D +RD VI VVE+ D+ A+ER++ LYHVLGG++ P++ + Sbjct: 60 ETCGNIAESEQCAICRDPRRDQRVICVVEEPKDVVAIERTREYRGLYHVLGGAIDPINGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ ++ L+ R+ + E+I A + G+ TA Y+ L+ ++V ++RLA G+P+G Sbjct: 120 GPDDLRVRELLARL-GGDVEEVILATDPDVVGEATAAYLTRMLRTMEVPVSRLASGLPVG 178 Query: 181 SELDYLDDGTIFEAIRSRT 199 S+L+Y D+ T+ A R Sbjct: 179 SDLEYADEVTLGRAFEGRR 197 >gi|313114016|ref|ZP_07799570.1| recombination protein RecR [Faecalibacterium cf. prausnitzii KLE1255] gi|310623636|gb|EFQ07037.1| recombination protein RecR [Faecalibacterium cf. prausnitzii KLE1255] Length = 199 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 116/199 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 T +E LI+ ++ PG G + A R ++ ++ LA A+ + K+ C I Sbjct: 1 MGYTAAPLEKLIEEFSKFPGIGRKGATRMAYQVLSMSDEDAAALAGAIQGAHTKLHRCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N D C IC +RD SVI VVE D+ A ER++ + LYHVL G LSP+D I Sbjct: 61 CQNYTEADICPICASAKRDPSVICVVETPRDVQAFERTREYHGLYHVLHGLLSPMDGITA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++ L+ R+ K++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G+ Sbjct: 121 EQLCVKELLARLGDGKVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGAS 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T++ A+ R L Sbjct: 181 LEYTDETTLYRALSGRGEL 199 >gi|167041264|gb|ABZ06020.1| putative Toprim domain protein [uncultured marine microorganism HF4000_005D21] gi|167045769|gb|ABZ10415.1| putative Toprim domain protein [uncultured marine bacterium HF4000_APKG3108] Length = 201 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 84/191 (43%), Positives = 128/191 (67%), Gaps = 2/191 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 KEIE LIKI+A++PG GP+SA+R L L+ +E+L PL +A +Y V C +CGN+ Sbjct: 7 KEIEELIKIIAKLPGLGPKSAKRIVLKLINNREELAKPLVNTLAQVYKNVIRCKVCGNLK 66 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + + C + ++ I VVE++AD+W ++ S YH+LGG+L L+ + + + Sbjct: 67 SANSNCTCSN--KNYDQICVVENIADMWVIQSSGIYKGHYHILGGTLPSLESKKDDGLLV 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LD Sbjct: 125 SSLVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGVPVGGEIEFLD 184 Query: 188 DGTIFEAIRSR 198 DGT+F A ++R Sbjct: 185 DGTLFSAFKNR 195 >gi|167837617|ref|ZP_02464500.1| recombination protein RecR [Burkholderia thailandensis MSMB43] Length = 200 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MSIK-PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 60 EKCNTFTQAPICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 180 GELEYVDAGTIARAMLDRRTL 200 >gi|160887705|ref|ZP_02068708.1| hypothetical protein BACUNI_00106 [Bacteroides uniformis ATCC 8492] gi|317478909|ref|ZP_07938056.1| recombination protein RecR [Bacteroides sp. 4_1_36] gi|156862836|gb|EDO56267.1| hypothetical protein BACUNI_00106 [Bacteroides uniformis ATCC 8492] gi|316904886|gb|EFV26693.1| recombination protein RecR [Bacteroides sp. 4_1_36] Length = 205 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 124/200 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +E + A++PG G ++A R LHL+++ ++ A+ + ++V C Sbjct: 1 MNGQFPSTLLEKAVNEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAIVTLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC QRDASV+ VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCRICSSPQRDASVVCVVENIRDVMAVEATQQFRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ +A GI +G Sbjct: 121 GPGDLQIESLVRRVAAGGINEVILALSTTMEGDTTNFYIYRKLEKLGVKLSVIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIVNRTP 200 >gi|312887351|ref|ZP_07746952.1| recombination protein RecR [Mucilaginibacter paludis DSM 18603] gi|311300154|gb|EFQ77222.1| recombination protein RecR [Mucilaginibacter paludis DSM 18603] Length = 205 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 125/198 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E + +++PG G ++A R LHL+ ++++ + ++A++ + N++ C + Sbjct: 1 MNFSSKLLEAAVAEFSKLPGVGQKTALRLVLHLLNQEKEEVESFSKAISKLRNEIQFCEV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC +RD S++ VVED D+ A+E + N LYHVLG +SP+D IGP Sbjct: 61 CHNISDLPVCEICSAPKRDRSLVCVVEDTRDVMAVENTSQYNGLYHVLGALISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ + SLIER+ +++E+IFA+SAT+EG TT Y+ +LK ++ I+ +A GI G E Sbjct: 121 ADLEVDSLIERLRTDEVKEVIFALSATMEGDTTIFYLHKRLKEFNIHISTIARGIAFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y+D+ T+ +I +R Sbjct: 181 LEYVDEITLGRSITTRVP 198 >gi|146276571|ref|YP_001166730.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17025] gi|166221959|sp|A4WPW1|RECR_RHOS5 RecName: Full=Recombination protein recR gi|145554812|gb|ABP69425.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17025] Length = 199 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 101/199 (50%), Positives = 138/199 (69%), Gaps = 2/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +IE LI+++AR+PG GPRSARRA L ++KK+ ++ PLA+AMA + C Sbjct: 1 MAE--APGDIERLIELMARLPGLGPRSARRAVLVMLKKRGAVMAPLAQAMAEVAATARDC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + CGN+ + D C IC D +R + VVEDVADLWALER+ YHVLGG LS LD + Sbjct: 59 ARCGNITSADLCDICRDDRRATGELCVVEDVADLWALERAGVFRGRYHVLGGVLSALDSV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I L ER+ + I E+I A++AT++GQTTAHYI D L+ V++T LA G+P+G Sbjct: 119 GPDELRIPRLAERVRDEGISEVILALNATVDGQTTAHYIADVLEPSGVQVTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGTI A+R+R Sbjct: 179 GELDYLDDGTIGAALRARR 197 >gi|332529399|ref|ZP_08405360.1| recombination protein RecR [Hylemonella gracilis ATCC 19624] gi|332041197|gb|EGI77562.1| recombination protein RecR [Hylemonella gracilis ATCC 19624] Length = 196 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 87/193 (45%), Positives = 117/193 (60%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++ LI L R+PG G RSA+R HL++ + LA A+ +V C+ C Sbjct: 4 PHSLDALIHALRRLPGVGQRSAQRMAFHLLQHDREGAQLLAGALQQAVAQVRHCARCHTF 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T+ CA+C D RDAS + VVE AD ALER+ A LYHVL G LSPLD IGP+DIG Sbjct: 64 SETEICALCSDPARDASRLCVVETPADQMALERTGAYKGLYHVLMGRLSPLDGIGPKDIG 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + +L+ R +RE+I A + T EG+ TAH I + +K V +TRLA G+P+GSEL+Y+ Sbjct: 124 LPALLARASDGTVREVIIATNFTGEGEATAHVIAEAMKSRGVAVTRLARGVPIGSELEYV 183 Query: 187 DDGTIFEAIRSRT 199 D GTI A+ R Sbjct: 184 DLGTIAHALADRR 196 >gi|118473908|ref|YP_890498.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 155] gi|171472986|sp|A0R5R0|RECR_MYCS2 RecName: Full=Recombination protein recR gi|118175195|gb|ABK76091.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 155] Length = 203 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L + I + V CS+CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLGRIRDGVTFCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDAS++ VVE+ D+ A+ER++ YHVLGG+L PL IGPE Sbjct: 61 NVSDEERCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQ 120 Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLNRIGERVEGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|307129960|ref|YP_003881976.1| gap repair protein [Dickeya dadantii 3937] gi|306527489|gb|ADM97419.1| gap repair protein [Dickeya dadantii 3937] Length = 201 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLATETISEVILATNPTVEGDATANYIAELCAENGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|312137878|ref|YP_004005214.1| recombination protein recr [Rhodococcus equi 103S] gi|325673355|ref|ZP_08153047.1| recombination protein R [Rhodococcus equi ATCC 33707] gi|311887217|emb|CBH46526.1| recombination protein recR [Rhodococcus equi 103S] gi|325555945|gb|EGD25615.1| recombination protein R [Rhodococcus equi ATCC 33707] Length = 202 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 116/202 (57%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L + + + V C +CG Sbjct: 1 MYEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPEIDRLQAVLQKVRDGVQFCVVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V + C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 TVSEEEKCRICSDPRRDRTMVCVVEEPKDVQAIERTREFKGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ RI ++ E+I A EG+ TA Y++ L+ + ++RLA G+PM Sbjct: 121 LRIRELLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADELTLGRALSGRRTL 202 >gi|261880555|ref|ZP_06006982.1| recombination protein R [Prevotella bergensis DSM 17361] gi|270332779|gb|EFA43565.1| recombination protein R [Prevotella bergensis DSM 17361] Length = 201 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 130/200 (65%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ +E + ++PG G +++ R L+L+++ + ++A++ + N + C Sbjct: 1 MEQYPSALLEKAVSEFCKLPGIGRKTSLRLVLYLLRQPVNRVNAFSDAISYVRNNIKYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 IC N+ T+ C+IC D +RD++ + VVE++ D+ A+E ++ + LYHVLGG +SP+D I Sbjct: 61 ICHNISDTEVCSICSDTRRDSTTVCVVENIQDVMAVESTQQYHGLYHVLGGVISPMDGIS 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I SL+ER+ +I+E+IFA+S+T+EG TT Y+ LK DVK++ +A GI +G+ Sbjct: 121 PGDLQIDSLVERVARGEIKEIIFALSSTMEGDTTNFYLSRLLKKYDVKLSLIARGISVGN 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y D+ T+ +I +RT L Sbjct: 181 ELEYADEVTLGRSILNRTPL 200 >gi|53723571|ref|YP_103019.1| recombination protein RecR [Burkholderia mallei ATCC 23344] gi|67639897|ref|ZP_00438726.1| recombination protein RecR [Burkholderia mallei GB8 horse 4] gi|121601240|ref|YP_993168.1| recombination protein RecR [Burkholderia mallei SAVP1] gi|124385650|ref|YP_001026056.1| recombination protein RecR [Burkholderia mallei NCTC 10229] gi|126450201|ref|YP_001080675.1| recombination protein RecR [Burkholderia mallei NCTC 10247] gi|167738247|ref|ZP_02411021.1| recombination protein RecR [Burkholderia pseudomallei 14] gi|167910623|ref|ZP_02497714.1| recombination protein RecR [Burkholderia pseudomallei 112] gi|254178520|ref|ZP_04885175.1| recombination protein RecR [Burkholderia mallei ATCC 10399] gi|254189072|ref|ZP_04895583.1| recombination protein RecR [Burkholderia pseudomallei Pasteur 52237] gi|254199966|ref|ZP_04906332.1| recombination protein RecR [Burkholderia mallei FMH] gi|254206299|ref|ZP_04912651.1| recombination protein RecR [Burkholderia mallei JHU] gi|254260508|ref|ZP_04951562.1| recombination protein RecR [Burkholderia pseudomallei 1710a] gi|254297414|ref|ZP_04964867.1| recombination protein RecR [Burkholderia pseudomallei 406e] gi|254358287|ref|ZP_04974560.1| recombination protein RecR [Burkholderia mallei 2002721280] gi|73621474|sp|Q62JV0|RECR_BURMA RecName: Full=Recombination protein recR gi|166221926|sp|A3MK89|RECR_BURM7 RecName: Full=Recombination protein recR gi|166221927|sp|A2S287|RECR_BURM9 RecName: Full=Recombination protein recR gi|166221928|sp|A1V4L5|RECR_BURMS RecName: Full=Recombination protein recR gi|172046644|sp|Q3JRN7|RECR_BURP1 RecName: Full=Recombination protein recR gi|52426994|gb|AAU47587.1| recombination protein RecR [Burkholderia mallei ATCC 23344] gi|121230050|gb|ABM52568.1| recombination protein RecR [Burkholderia mallei SAVP1] gi|124293670|gb|ABN02939.1| recombination protein RecR [Burkholderia mallei NCTC 10229] gi|126243071|gb|ABO06164.1| recombination protein RecR [Burkholderia mallei NCTC 10247] gi|147749562|gb|EDK56636.1| recombination protein RecR [Burkholderia mallei FMH] gi|147753742|gb|EDK60807.1| recombination protein RecR [Burkholderia mallei JHU] gi|148027414|gb|EDK85435.1| recombination protein RecR [Burkholderia mallei 2002721280] gi|157807148|gb|EDO84318.1| recombination protein RecR [Burkholderia pseudomallei 406e] gi|157936751|gb|EDO92421.1| recombination protein RecR [Burkholderia pseudomallei Pasteur 52237] gi|160699559|gb|EDP89529.1| recombination protein RecR [Burkholderia mallei ATCC 10399] gi|238520509|gb|EEP83968.1| recombination protein RecR [Burkholderia mallei GB8 horse 4] gi|254219197|gb|EET08581.1| recombination protein RecR [Burkholderia pseudomallei 1710a] Length = 200 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MSIK-PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 60 EKCNTFTEAQICEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 180 GELEYVDAGTIARAMLDRRTL 200 >gi|312129997|ref|YP_003997337.1| recombination protein recr [Leadbetterella byssophila DSM 17132] gi|311906543|gb|ADQ16984.1| recombination protein RecR [Leadbetterella byssophila DSM 17132] Length = 200 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + IE + ++++PG G +SA R LHL+K +Q+ L+ A+ N+ C+ Sbjct: 1 MNYPSRTIEEAVSEISKLPGIGKKSALRMALHLLKSDKQVAHSLSSALVNLVENTTFCTE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC +R+ S+I VV+D D+ A+E + LYHVLGG ++P+ IGP Sbjct: 61 CHNISDQSICQICSSHRRERSIIAVVQDTKDVLAIENTGQYQGLYHVLGGVIAPVQGIGP 120 Query: 123 EDIGIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 + I +L+ER+ + +E+I A+S T+EG TTA YI KL ++I+ +A GIP+G Sbjct: 121 NQLHIDALVERLRKNEEVKEVILALSPTMEGDTTAFYIRKKLAEFPIRISTIARGIPVGG 180 Query: 182 ELDYLDDGTIFEAIRSR 198 +L+Y D+ T+ +I SR Sbjct: 181 DLEYTDEITLGRSILSR 197 >gi|255014909|ref|ZP_05287035.1| recombination protein RecR [Bacteroides sp. 2_1_7] Length = 208 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 122/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 IC N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I Sbjct: 61 KICHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G Sbjct: 121 GPSDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSIINRTE 200 >gi|303232546|ref|ZP_07319232.1| recombination protein RecR [Atopobium vaginae PB189-T1-4] gi|302481333|gb|EFL44407.1| recombination protein RecR [Atopobium vaginae PB189-T1-4] Length = 199 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 115/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ ++ ++PG GP+SA R L+++ Q LA+A+ + ++V C +C T Sbjct: 7 ALQCVLDEFGKLPGIGPKSAARIAYFLMEQPTQDATRLAQAIIRLKDEVHFCPVCFTYAT 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C C D RD + I VV + D+ A+E + A + LYHVLGG +SP+D IGPE++ + Sbjct: 67 DDLCTYCSDSSRDTTTICVVAEPKDVAAIENTHAYHGLYHVLGGVISPMDNIGPEELHVA 126 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R+ + + E+I A S +EG+TTA Y+ LK + V TRLA G+P+G +L+Y D+ Sbjct: 127 ELTRRLANQTVHEVILATSPNVEGETTAIYLARLLKPLGVTTTRLASGLPVGGDLEYADE 186 Query: 189 GTIFEAIRSRTVL 201 T+ AI +R L Sbjct: 187 VTLGRAIEARREL 199 >gi|329296815|ref|ZP_08254151.1| recombination protein RecR [Plautia stali symbiont] Length = 201 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ LA+A+ ++ CS C Sbjct: 3 TSPLLEALMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMCLAQALTRAMAEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPQD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLERETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|293400032|ref|ZP_06644178.1| recombination protein RecR [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306432|gb|EFE47675.1| recombination protein RecR [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 196 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K+ E L++ ++PG G ++A R ++ E+ L +++A++ + + C +CG Sbjct: 1 MYPKKFEALVESFRKLPGVGMKTAERYAFQTLEWDEETLNGFIQSLADMKDGLKKCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC D R +I VV+ D+ A+E++K +YHVL G +S I PED Sbjct: 61 NLAEGDLCDICKDTTRQRDIICVVQSPKDVIAMEKTKEYAGVYHVLNGVISTAKGILPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I+SL+ RI + +E+I A + T+EG+TTA Y+ L+ DV +TR+A+G+PMG LD Sbjct: 121 INIESLLTRI-QEDTKEIIIATNPTVEGETTALYLSKLLESYDVTVTRIAHGLPMGGHLD 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +AI R + Sbjct: 180 YADELTLIKAIEGRKKM 196 >gi|297183474|gb|ADI19605.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11 cluster bacterium HF0770_37D02] Length = 201 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 82/189 (43%), Positives = 129/189 (68%), Gaps = 2/189 (1%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 IE+LIK+++++PG GP+SA+R L L+ +E+L+ PLA +A +Y V C+ICGN+ + Sbjct: 9 IEDLIKLISKLPGLGPKSAKRIVLKLINNREELIKPLANTLAQVYKNVVRCTICGNLKSV 68 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 C + ++ I VVE++AD+W ++ S YH+LGG+L L+ + + + S Sbjct: 69 SANCTCSN--KNYKQICVVENIADMWVIQSSGIYKGHYHILGGTLPALESKKDDGLLVSS 126 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R++ ++E+I A SATIEGQTTAHYI D LK VKI++LA G+P+G E+++LDDG Sbjct: 127 LVTRVKKNSVKEVILATSATIEGQTTAHYIQDSLKDTKVKISKLAQGLPVGGEIEFLDDG 186 Query: 190 TIFEAIRSR 198 T+F A ++R Sbjct: 187 TLFSAFKNR 195 >gi|254526541|ref|ZP_05138593.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9202] gi|221537965|gb|EEE40418.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9202] Length = 199 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N Sbjct: 4 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSKALLEAHSNVGRCKKCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + D C IC + QR+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + Sbjct: 64 LTSEDECEICKNTQRNQKLICVVSETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 183 VDEVTLARALEGRTNL 198 >gi|197284053|ref|YP_002149925.1| recombination protein RecR [Proteus mirabilis HI4320] gi|227358075|ref|ZP_03842417.1| recombination protein [Proteus mirabilis ATCC 29906] gi|229470337|sp|B4EU79|RECR_PROMH RecName: Full=Recombination protein recR gi|194681540|emb|CAR40459.1| recombination protein [Proteus mirabilis HI4320] gi|227161810|gb|EEI46842.1| recombination protein [Proteus mirabilis ATCC 29906] Length = 201 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCCDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEEERCTICANARRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA+YI + D+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSQEPISEVILATNPTVEGEATANYIAEICAQYDIAASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ +I R + Sbjct: 183 MVDGTTLSHSIAGRQKI 199 >gi|78184972|ref|YP_377407.1| recombination protein RecR [Synechococcus sp. CC9902] gi|123581335|sp|Q3AX77|RECR_SYNS9 RecName: Full=Recombination protein recR gi|78169266|gb|ABB26363.1| DNA replication and repair protein RecR [Synechococcus sp. CC9902] Length = 192 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 1/190 (0%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 LI R+PG GPR+A+R LHL+ + E + A+A+ ++V C C ++ Sbjct: 3 RLIDQFQRLPGIGPRTAQRLALHLLNQPEDQVQQFADALLAARSQVGQCQSCFHLSADPL 62 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC +R+ +I VV D DL ALER++ YHVLGG +SP+D IGPE + I+ LI Sbjct: 63 CEICSKPERNNGLICVVADSRDLLALERTREFKGQYHVLGGLISPMDGIGPELLHIKPLI 122 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 ERI I E+I A++ ++EG TT+ Y+ +K ++R+AYG+PMGSEL+Y D+ T+ Sbjct: 123 ERIAKDGISEVILALTPSVEGDTTSLYLARLMKPFC-PVSRIAYGLPMGSELEYADEVTL 181 Query: 192 FEAIRSRTVL 201 A+ R + Sbjct: 182 SRALEGRRPM 191 >gi|145221880|ref|YP_001132558.1| recombination protein RecR [Mycobacterium gilvum PYR-GCK] gi|315446385|ref|YP_004079264.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1] gi|145214366|gb|ABP43770.1| DNA replication and repair protein RecR [Mycobacterium gilvum PYR-GCK] gi|315264688|gb|ADU01430.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1] Length = 203 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L + + + V CS+CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRVRDGVTFCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDAS+I VVE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSDEERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLSVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|227431247|ref|ZP_03913301.1| recombination protein RecR [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353009|gb|EEJ43181.1| recombination protein RecR [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 213 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 123/199 (61%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R T + + E+ + ++A+ + + CSICGN Sbjct: 15 YPEPIAKLIDSYTKLPGIGPKTATRLTFYTLGMNEEDVQDFSKALISAKTDLTFCSICGN 74 Query: 66 VD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + TDPC IC DQ RD S + VVE+ D+ A+E ++ + LYHVL G +SP GPE Sbjct: 75 ITATDTDPCVICRDQSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 134 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ E ++I+E+I +A EG+ TA Y+ LK + +TRLA+G+ +GS+ Sbjct: 135 DINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAVGSD 194 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D+ T+ +A++ RT L Sbjct: 195 IDYADELTLIKAVQGRTKL 213 >gi|225018613|ref|ZP_03707805.1| hypothetical protein CLOSTMETH_02563 [Clostridium methylpentosum DSM 5476] gi|224948607|gb|EEG29816.1| hypothetical protein CLOSTMETH_02563 [Clostridium methylpentosum DSM 5476] Length = 201 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 118/195 (60%), Gaps = 2/195 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ L + A +PG G ++A R +++ ++ A A+ ++ + CS+C N Sbjct: 7 PLKILAEQFASLPGIGMKTAWRLAFYVLTMTKEQSDEFAHAITTAHDTIKNCSVCQNYTD 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C IC D RD SVI VVE D+ A ERS+ LYHVL G +SP+D IGP+ + I+ Sbjct: 67 KLVCDICADGMRDKSVICVVESPKDVVAFERSRGFKGLYHVLHGLISPMDGIGPDQLFIK 126 Query: 129 SLIERI--EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 L+ RI ++++E+I A + T+EG+ TA Y+ LK + VK+TRLAYG+P+G EL++ Sbjct: 127 QLLSRIGDPQQEVKEVIMATNPTVEGEATAMYLSKLLKPLGVKVTRLAYGVPVGGELEFA 186 Query: 187 DDGTIFEAIRSRTVL 201 D+ T+ +A+ +R L Sbjct: 187 DEMTLSKALENRNEL 201 >gi|294791168|ref|ZP_06756325.1| recombination protein RecR [Scardovia inopinata F0304] gi|294457639|gb|EFG25993.1| recombination protein RecR [Scardovia inopinata F0304] Length = 216 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 121/215 (56%), Gaps = 15/215 (6%) Query: 1 MQKKITG------------KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 M + I+NLI A +PG GP+ A+R HL+ + LA+ Sbjct: 1 MSNAYSSFNSSLGSGSSYEAAIQNLIDRFASLPGIGPKGAQRIAFHLLSISQDDAQALAD 60 Query: 49 AMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYH 108 ++ + KV C ICGNV + PC IC D +RD + I +V++ D+ ++ER+ LYH Sbjct: 61 SIVEMKQKVRFCEICGNVCESSPCLICADPRRDHTTICLVQEPKDIMSIERTHEYRGLYH 120 Query: 109 VLGGSLSPLDRIGPEDIGIQSLIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKG 165 VLGG++ P+ IGP+D+ I L+ R++ ++E+IFA++ IEG+ T Y+ L Sbjct: 121 VLGGAIDPMSNIGPQDLKIADLLNRLKTPEGKNVKEIIFALNPDIEGEATTTYLSRLLGP 180 Query: 166 IDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 + + +TRLA G+PMGS+L+Y D+ T+ AI R Sbjct: 181 LGITLTRLASGLPMGSDLEYADEITLGRAITGRRE 215 >gi|288940168|ref|YP_003442408.1| recombination protein RecR [Allochromatium vinosum DSM 180] gi|288895540|gb|ADC61376.1| recombination protein RecR [Allochromatium vinosum DSM 180] Length = 198 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 116/193 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ L +PG GP+SARR HL+++ + LA MA + CS C + Sbjct: 6 LLNQLIEALRCLPGVGPKSARRIAFHLLERDREGGARLARVMAEAMVAIRRCSRCRTLTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + CA+C + RD S++ +VE +++ A+E++ Y VLGG LSPLD IGP+++G+ Sbjct: 66 HEVCALCANPNRDGSLLCIVEQPSEVVAIEQATDYRGRYFVLGGRLSPLDGIGPDELGLD 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R+ + I E+I AIS T+EG TA +I D+ V++TR+A+G+P+G EL+Y+D Sbjct: 126 VLEARLRDESIAEVILAISPTVEGGATAQFIADRAARHGVRVTRIAHGVPLGGELEYVDG 185 Query: 189 GTIFEAIRSRTVL 201 GT+ A R L Sbjct: 186 GTLALAFSGRHAL 198 >gi|313146708|ref|ZP_07808901.1| recombination protein recR [Bacteroides fragilis 3_1_12] gi|313135475|gb|EFR52835.1| recombination protein recR [Bacteroides fragilis 3_1_12] Length = 207 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 126/200 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ ++ ++ + ++V C Sbjct: 3 MNQQYPSTLLEKAVGEFSKLPGIGRKTAMRLVLHLLRQDTSVVEAFGSSIITLKHEVKYC 62 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + QRDAS++ VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 63 KVCHNISDTETCQICANPQRDASMVCVVENIRDVMAVEATQQYRGLYHVLGGVISPMDGV 122 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ R+ I E+I A+S T+EG TT YI KL+ + VK++ LA G+ +G Sbjct: 123 GPGDLQIESLVRRVAEGGINEVILALSTTMEGDTTNFYIYRKLEKMGVKLSVLARGVSIG 182 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 183 DELEYTDEITLGRSIVNRTT 202 >gi|257452755|ref|ZP_05618054.1| recombination protein recR [Fusobacterium sp. 3_1_5R] gi|257466876|ref|ZP_05631187.1| recombination protein recR [Fusobacterium gonidiaformans ATCC 25563] gi|315918024|ref|ZP_07914264.1| recombination protein recR [Fusobacterium gonidiaformans ATCC 25563] gi|317059296|ref|ZP_07923781.1| recombination protein recR [Fusobacterium sp. 3_1_5R] gi|313684972|gb|EFS21807.1| recombination protein recR [Fusobacterium sp. 3_1_5R] gi|313691899|gb|EFS28734.1| recombination protein recR [Fusobacterium gonidiaformans ATCC 25563] Length = 197 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 120/196 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ EQ + +A+ +I K+ C +CG Sbjct: 1 MAIKSLEKLIDQFHKLPGIGRKSATRLGFHILDYSEQEIDDFIQALEDIKGKIHRCPVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC D+ RD I VVED D+ +LE++ LYH+LGG L+PL I P+ Sbjct: 61 DYCEEELCPICSDEARDHKSICVVEDSRDVVSLEKTGKYRGLYHILGGKLAPLQGITPDK 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++SL+ER+ + ++E+I A++ +EG+TTA Y++ LK DVKIT++A GIPMG L+ Sbjct: 121 LNLKSLLERLAKEDVQEIILALNPDLEGETTAMYLVKLLKPFDVKITKIASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 + D TI A+ +R Sbjct: 181 FADSATIARALDARQE 196 >gi|309782343|ref|ZP_07677069.1| recombination protein RecR [Ralstonia sp. 5_7_47FAA] gi|308918879|gb|EFP64550.1| recombination protein RecR [Ralstonia sp. 5_7_47FAA] Length = 207 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L+ L +PG GP+SA+R HL++ + LA+A++ + CS C Sbjct: 8 TPSALQMLVDALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNT 67 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 68 FTEQDICETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K TRLA G+P+G Sbjct: 128 HLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLARGVPVGG 187 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207 >gi|259048075|ref|ZP_05738476.1| recombination protein RecR [Granulicatella adiacens ATCC 49175] gi|259035136|gb|EEW36391.1| recombination protein RecR [Granulicatella adiacens ATCC 49175] Length = 198 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 121/196 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG G ++A R + +E+ + A ++ + + +CS+CGN Sbjct: 3 YPEPIARLMDSFMKLPGIGAKTAARLAFFCMDMREEDVLNFANSLISCKRDLRMCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V DPC IC D RD + I+VVED D+ ++ER K LYHVL G LSP++ GP+DI Sbjct: 63 VTQEDPCEICADTTRDRTKILVVEDARDVMSMERMKEYKGLYHVLHGVLSPMEGTGPDDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SLI R++ +I+E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NITSLITRLQDPEIQEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+F AI R L Sbjct: 183 ADEMTLFRAIEGRREL 198 >gi|121997039|ref|YP_001001826.1| recombination protein RecR [Halorhodospira halophila SL1] gi|171769498|sp|A1WTL2|RECR_HALHL RecName: Full=Recombination protein recR gi|121588444|gb|ABM61024.1| recombination protein RecR [Halorhodospira halophila SL1] Length = 201 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 117/197 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + L++ L R+PG G ++A+R LHL+++ LA+A+ + V C Sbjct: 1 MSVYSPRLRELVEGLRRLPGVGAKTAQRMALHLLQRDRDGARQLADALQRAVDGVGHCPE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + + C +C QR +++ VVE AD++ALE++ LY VLGG+LSPLD IGP Sbjct: 61 CGLLTEEERCGLCASPQRRRTLLCVVESSADVFALEQATDFQGLYFVLGGALSPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E++G+ L +R+E ++ E+I A + TIEG+ TAHY+ V+ TR+A+G+PMG Sbjct: 121 EELGLDRLQQRLEAGEVEEIILATNPTIEGEATAHYVQSLAAERGVRTTRIAHGVPMGGA 180 Query: 183 LDYLDDGTIFEAIRSRT 199 L+ +D GT+ A R Sbjct: 181 LEQVDQGTLSHAFMGRR 197 >gi|150008070|ref|YP_001302813.1| recombination protein RecR [Parabacteroides distasonis ATCC 8503] gi|262381356|ref|ZP_06074494.1| recombination protein RecR [Bacteroides sp. 2_1_33B] gi|298376576|ref|ZP_06986531.1| recombination protein RecR [Bacteroides sp. 3_1_19] gi|301309833|ref|ZP_07215772.1| recombination protein RecR [Bacteroides sp. 20_3] gi|166221950|sp|A6LBX7|RECR_PARD8 RecName: Full=Recombination protein recR gi|149936494|gb|ABR43191.1| recombination protein RecR [Parabacteroides distasonis ATCC 8503] gi|262296533|gb|EEY84463.1| recombination protein RecR [Bacteroides sp. 2_1_33B] gi|298266454|gb|EFI08112.1| recombination protein RecR [Bacteroides sp. 3_1_19] gi|300831407|gb|EFK62038.1| recombination protein RecR [Bacteroides sp. 20_3] Length = 208 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 122/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I Sbjct: 61 KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G Sbjct: 121 GPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSIINRTE 200 >gi|119774449|ref|YP_927189.1| recombination protein RecR [Shewanella amazonensis SB2B] gi|166221961|sp|A1S563|RECR_SHEAM RecName: Full=Recombination protein recR gi|119766949|gb|ABL99519.1| recombination protein RecR [Shewanella amazonensis SB2B] Length = 199 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L++ + LA+ ++ + V C C Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKCRT 62 Query: 66 VDTTDPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R + VVE AD+ A+E Y VL G LSPLD IGPE+ Sbjct: 63 FTEQSLCPICSSSRRGEADTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L ++ I ELI A + T+EG TAHYI D + V ++R+A+G+P+G EL+ Sbjct: 123 LGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADIARRAGVAVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|134096870|ref|YP_001102531.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 2338] gi|133909493|emb|CAL99605.1| putative recombination and repair protein [Saccharopolyspora erythraea NRRL 2338] Length = 190 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 1/187 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I L R+PG GP+SA+R HL+ + + L E + + V C ICGNV C Sbjct: 2 IDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICGNVSEEPTCR 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ + ++ L+ R Sbjct: 62 ICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQLRVRELLTR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTIF 192 I +I E+I A EG+ TA Y++ L+ + +TRLA G+PMG +L++ D+ T+ Sbjct: 122 IGRDEITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDLEFADELTLG 181 Query: 193 EAIRSRT 199 A+ R Sbjct: 182 RALSGRR 188 >gi|297538150|ref|YP_003673919.1| recombination protein RecR [Methylotenera sp. 301] gi|297257497|gb|ADI29342.1| recombination protein RecR [Methylotenera sp. 301] Length = 198 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 3/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ +E LI L +PG GP+SA+R +L+++ L+ A+ V C Sbjct: 1 MKN---PPALEQLIDSLRCLPGVGPKSAQRMAYYLLQRDRNGASALSAALETALEVVDHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C C +C RD +++ VVE DL LE + A +Y VL G LSPLD I Sbjct: 58 KLCNTFSEQPICPLCAADNRDKNLLCVVEMPTDLLMLENTHAFMGMYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I + LI+R + + E+I A + T+EG+ TAHYI + LK +K +R+A G+PMG Sbjct: 118 GPKEIHLDKLIKRAQDGLVNEVILATNYTVEGEATAHYISELLKTRGIKTSRIARGMPMG 177 Query: 181 SELDYLDDGTIFEAIRSRT 199 E++Y+D GT+ +A+ R Sbjct: 178 GEIEYVDSGTLAQAMMERR 196 >gi|256840750|ref|ZP_05546258.1| recombination protein RecR [Parabacteroides sp. D13] gi|256738022|gb|EEU51348.1| recombination protein RecR [Parabacteroides sp. D13] Length = 208 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 122/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +EN + LA +PG G ++A R L+++++ A A+ + V C Sbjct: 1 MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ + C+IC + RD S++ VVE++ ++ A+E + +YHVLGG +SP+D I Sbjct: 61 KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ +++E+I A+S T+EG TT +I KL G DV+I+ +A G+ +G Sbjct: 121 GPSDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSIINRTE 200 >gi|296101607|ref|YP_003611753.1| recombination protein RecR [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056066|gb|ADF60804.1| recombination protein RecR [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 201 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|308185944|ref|YP_003930075.1| Recombination protein recR [Pantoea vagans C9-1] gi|308056454|gb|ADO08626.1| Recombination protein recR [Pantoea vagans C9-1] Length = 201 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPAD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQK 198 >gi|290474635|ref|YP_003467515.1| gap repair protein [Xenorhabdus bovienii SS-2004] gi|289173948|emb|CBJ80735.1| gap repair protein with type I DNA topoisomerase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus bovienii SS-2004] Length = 202 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCQDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEQCTICGNPRRQQNGQICVVETPADIHAIEQTGQFAGRYFVLMGRLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSSETLSEIILATNPTVEGEATANYIAEMCSQYGVIASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRQRI 199 >gi|254506919|ref|ZP_05119058.1| recombination protein RecR [Vibrio parahaemolyticus 16] gi|219550204|gb|EED27190.1| recombination protein RecR [Vibrio parahaemolyticus 16] Length = 200 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCSECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQENGQLCVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKESQVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRQKL 199 >gi|50120117|ref|YP_049284.1| recombination protein RecR [Pectobacterium atrosepticum SCRI1043] gi|73621484|sp|Q6D7Z7|RECR_ERWCT RecName: Full=Recombination protein recR gi|49610643|emb|CAG74088.1| recombination protein [Pectobacterium atrosepticum SCRI1043] Length = 201 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GPRSA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMEALRCLPGVGPRSAQRMAFQLLQRNRSGGMRLAQALTQAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + ++ VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCAICSNPRRQQNGLVCVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER++V+ E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLGRLEERLQVESFNEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQP 198 >gi|330718538|ref|ZP_08313138.1| recombination protein RecR [Leuconostoc fallax KCTC 3537] Length = 201 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R + + + + ++++ + + C CG Sbjct: 3 YPEPIAKLIDNYTKLPGIGPKTATRLAFYTLGMDNEDVESFSKSLISAKKDLTFCDTCGM 62 Query: 66 VDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + D C IC D+ R+ + VVE+ D+ A+E ++ + LYHVL G +SP GPE Sbjct: 63 ITEKDMNPCIICRDKSRNQGTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 122 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SL+ R+ E ++I+E+I +A EG+ TA Y+ LK +K+TRLA+G+ +GS+ Sbjct: 123 DINLPSLVRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIKVTRLAHGLSVGSD 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D+ T+ +A++ RT L Sbjct: 183 IDYADELTLIKAVQGRTEL 201 >gi|170767663|ref|ZP_02902116.1| recombination protein RecR [Escherichia albertii TW07627] gi|218703755|ref|YP_002411274.1| recombination protein RecR [Escherichia coli UMN026] gi|293403593|ref|ZP_06647684.1| recombination protein recR [Escherichia coli FVEC1412] gi|298379203|ref|ZP_06989084.1| recombination protein recR [Escherichia coli FVEC1302] gi|300900546|ref|ZP_07118713.1| recombination protein RecR [Escherichia coli MS 198-1] gi|226739002|sp|B7N925|RECR_ECOLU RecName: Full=Recombination protein recR gi|170123151|gb|EDS92082.1| recombination protein RecR [Escherichia albertii TW07627] gi|218430852|emb|CAR11726.1| gap repair protein [Escherichia coli UMN026] gi|291429446|gb|EFF02466.1| recombination protein recR [Escherichia coli FVEC1412] gi|298280316|gb|EFI21820.1| recombination protein recR [Escherichia coli FVEC1302] gi|300356027|gb|EFJ71897.1| recombination protein RecR [Escherichia coli MS 198-1] Length = 201 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|163750247|ref|ZP_02157489.1| recombination protein RecR [Shewanella benthica KT99] gi|161330103|gb|EDQ01087.1| recombination protein RecR [Shewanella benthica KT99] Length = 199 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + L++A++ + V C C Sbjct: 3 FSPLVDELIQTLKCLPGVGPKSAQRMAFQLLERDRKAGQSLSQALSKAMSDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDASV-IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R S I VVE AD+ A+E + Y VL G LSPLD +GP++ Sbjct: 63 FTEEVHCPICASHKRGLSQVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L E + ++ ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+ Sbjct: 123 LGLALLEEHLASGEVAELILATNPTVEGDATAHFIADIAKSHNVIVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|307127882|ref|YP_003879913.1| recombination protein RecR [Streptococcus pneumoniae 670-6B] gi|307705391|ref|ZP_07642250.1| recombination protein RecR [Streptococcus mitis SK597] gi|307707046|ref|ZP_07643843.1| recombination protein RecR [Streptococcus mitis SK321] gi|322377429|ref|ZP_08051920.1| recombination protein RecR [Streptococcus sp. M334] gi|306484944|gb|ADM91813.1| recombination protein RecR [Streptococcus pneumoniae 670-6B] gi|307617572|gb|EFN96742.1| recombination protein RecR [Streptococcus mitis SK321] gi|307621054|gb|EFO00132.1| recombination protein RecR [Streptococcus mitis SK597] gi|321281629|gb|EFX58638.1| recombination protein RecR [Streptococcus sp. M334] Length = 198 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPSRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|322515728|ref|ZP_08068693.1| recombination protein R [Actinobacillus ureae ATCC 25976] gi|322118190|gb|EFX90499.1| recombination protein R [Actinobacillus ureae ATCC 25976] Length = 201 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 111/196 (56%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENL++ L +PG GP+SA+R HL+++ L++A+ + C+ C Sbjct: 4 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALNEAMTHIGHCNSCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +I Sbjct: 64 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ Sbjct: 124 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 184 VDGTTLSHSFAGRRDI 199 >gi|167623526|ref|YP_001673820.1| recombination protein RecR [Shewanella halifaxensis HAW-EB4] gi|189029374|sp|B0TP04|RECR_SHEHH RecName: Full=Recombination protein recR gi|167353548|gb|ABZ76161.1| recombination protein RecR [Shewanella halifaxensis HAW-EB4] Length = 199 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA+++A + V C C Sbjct: 3 FSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC+ +R S +I VVE AD+ A+E + Y VL G LSPLD +GPE+ Sbjct: 63 FTEETYCPICVSTKRGHSDIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + + ELI A + T+EG TAHYI D K ++ ++R+A+G+P+G EL+ Sbjct: 123 LGLALLEQHLASGDVSELILATNPTVEGDATAHYIADMAKRHELMVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R + Sbjct: 183 YVDSTTLALSFNGRLPI 199 >gi|33151560|ref|NP_872913.1| recombination protein RecR [Haemophilus ducreyi 35000HP] gi|33147780|gb|AAP95302.1| recombination DNA repair protein [Haemophilus ducreyi 35000HP] Length = 201 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENLI L +PG GP+SA+R HL+++ LA+A+ + C+ C Sbjct: 3 TSPLLENLIDALRALPGIGPKSAQRMAYHLLQRNRNGGLNLAKALNEAMTHIGHCNACRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + + +VE D+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEEECTICKNPRRQISGQLCIVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + E+I A + TIEG TA+YI + +VK+TR+A+GIP+G L+ Sbjct: 123 IGLDLLQQRLEQESFHEIILATNPTIEGDATANYIAEICHLYNVKVTRIAHGIPVGGSLE 182 Query: 185 YLDDGTIFEAIRSRT 199 +D T+ + R Sbjct: 183 MVDGTTLSHSFAGRR 197 >gi|241895202|ref|ZP_04782498.1| recombination protein RecR [Weissella paramesenteroides ATCC 33313] gi|241871508|gb|EER75259.1| recombination protein RecR [Weissella paramesenteroides ATCC 33313] Length = 199 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + E+ + A+++ + + CSICGN Sbjct: 3 YPEPIAKLIDSYTKLPGIGIKTATRLAFYTIDMPEEEVTSFAQSLISAKRDLQFCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D+ RD S ++VV +V DL A+E + LYHVL G LSPL+ GP+DI Sbjct: 63 LTETDPCVICSDKNRDQSQVLVVAEVKDLMAIENTGEYRGLYHVLHGVLSPLEGKGPDDI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SL+ R++ + +E+I A +A EG+ TA Y+ LK +K++RLA G+ +GS++D Sbjct: 123 NIESLVNRLQKDETIQEVIVATNANAEGEATAMYLSRLLKPAGLKVSRLATGLSVGSDID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D T+ +A+ RT L Sbjct: 183 YADQITLIKAVEGRTQL 199 >gi|268591258|ref|ZP_06125479.1| recombination protein RecR [Providencia rettgeri DSM 1131] gi|291313229|gb|EFE53682.1| recombination protein RecR [Providencia rettgeri DSM 1131] Length = 199 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+++ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQSLTRAMSEIGHCRDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + +I +VE AD++A+E++ + Y VL G LSPLD IGP D Sbjct: 63 FTEQEVCNICDNPRRQQNGLICIVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLASETINEVILATNPTVEGEATANYIGQMCAQYGVAASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 MVDGTTLSHSLAGRQRL 199 >gi|306829918|ref|ZP_07463105.1| recombination protein R [Streptococcus mitis ATCC 6249] gi|322375681|ref|ZP_08050193.1| recombination protein RecR [Streptococcus sp. C300] gi|304427929|gb|EFM31022.1| recombination protein R [Streptococcus mitis ATCC 6249] gi|321279389|gb|EFX56430.1| recombination protein RecR [Streptococcus sp. C300] Length = 198 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDNEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|88857871|ref|ZP_01132513.1| recombination protein recR [Pseudoalteromonas tunicata D2] gi|88819488|gb|EAR29301.1| recombination protein recR [Pseudoalteromonas tunicata D2] Length = 202 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 1/195 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + LI L +PG GP+SA+R HL+++ L +A+ N KV C C Sbjct: 4 SASLTQLISSLRCLPGIGPKSAQRIAFHLLERDRDGGRQLGQALTNAMAKVGHCQTCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C +C + +R S ++ VVE +D+ A+E++ + Y VL G LSPLD IGP++I Sbjct: 64 CEEPVCELCQNVKRIDSGLLCVVESPSDVLAIEQTGQYSGRYFVLMGHLSPLDGIGPKEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L + I E+I A + T+EG+TTAH+I + + + +R+A+G+P+G ELD Sbjct: 124 GLDELEVQFSQGHITEVILATNPTVEGETTAHFIAELCQKYHIAASRIAHGVPVGGELDL 183 Query: 186 LDDGTIFEAIRSRTV 200 +D T+ A R Sbjct: 184 VDGKTLAHAFNGRKT 198 >gi|120436597|ref|YP_862283.1| recombination protein RecR [Gramella forsetii KT0803] gi|171460856|sp|A0M3M1|RECR_GRAFK RecName: Full=Recombination protein recR gi|117578747|emb|CAL67216.1| recombination protein RecR [Gramella forsetii KT0803] Length = 205 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 124/196 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E + ++++PG G R+A R LHL+K+ E+ L++A+ + + LC+ Sbjct: 1 MDFSSKLLEQAVDEMSQLPGIGKRTALRLVLHLLKQPEEQTTQLSKALLELRQNIKLCNN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC + R + ++ VVED+ D+ A+E + YHVLGG +SP+D IGP Sbjct: 61 CYNISDTELCEICANPSRVSEIVCVVEDIRDVMAIENTGQYRGHYHVLGGKISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I+ LIE+++ KI E+IFA+S+T+EG TT YI +L+G +K + +A GI +G E Sbjct: 121 SQLTIKPLIEKVQAGKIDEIIFALSSTLEGDTTNFYIFKQLEGTAIKTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSITNR 196 >gi|91792785|ref|YP_562436.1| recombination protein RecR [Shewanella denitrificans OS217] gi|123356908|sp|Q12PB3|RECR_SHEDO RecName: Full=Recombination protein recR gi|91714787|gb|ABE54713.1| recombination protein RecR [Shewanella denitrificans OS217] Length = 199 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R +L+++ ++ LAE++ N V C C Sbjct: 3 FSPLVDELIQALKGLPGVGPKSAQRMAFNLLERDRKVGLKLAESLKNAMTDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R AS VI VVE AD+ A+E N Y VL G LSPLD +GPE+ Sbjct: 63 FTEQSLCPICASHKRGASGVICVVETPADVLAIEAGGHFNGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + ++ + ELI A + T+EG TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLSLLEQHLQTLDVTELILATNPTVEGDATAHFIADMARRHKVIISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRIAL 199 >gi|157413568|ref|YP_001484434.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9215] gi|172047295|sp|A8G5G7|RECR_PROM2 RecName: Full=Recombination protein recR gi|157388143|gb|ABV50848.1| RecR protein [Prochlorococcus marinus str. MIT 9215] Length = 201 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + +EA+ ++ V C C N Sbjct: 6 YTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIRDFSEALLEAHSNVGRCKKCFN 65 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + D C IC + QR+ +I VV + DL ALER++ +YHV+GG +SP+D +GPE + Sbjct: 66 LTSEDECEICKNTQRNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELL 125 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 126 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPF-TKVTRIAYGLPMGSELEY 184 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 185 VDEVTLARALEGRTNL 200 >gi|114562713|ref|YP_750226.1| recombination protein RecR [Shewanella frigidimarina NCIMB 400] gi|122300117|sp|Q084C7|RECR_SHEFN RecName: Full=Recombination protein recR gi|114334006|gb|ABI71388.1| recombination protein RecR [Shewanella frigidimarina NCIMB 400] Length = 199 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L++++ ++ LA+++ ++V C C Sbjct: 3 FSPLVDELIQSLRALPGVGPKSAQRMAFQLLERERKVGLKLADSLQKAMSEVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC +R + +I VVE AD+ A+E N Y VL G LSPLD +GPE+ Sbjct: 63 FTEQDLCPICSSHRRINTGIICVVETPADVLAIEAGGHFNGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + ++ ELI A + T+EG TAH+I D + +V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLTSNEVSELILATNPTVEGDATAHFIADMARRHNVVISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRIPL 199 >gi|238855361|ref|ZP_04645673.1| recombination protein RecR [Lactobacillus jensenii 269-3] gi|260664923|ref|ZP_05865774.1| recombination protein RecR [Lactobacillus jensenii SJ-7A-US] gi|282934591|ref|ZP_06339838.1| recombination protein RecR [Lactobacillus jensenii 208-1] gi|313472531|ref|ZP_07813021.1| recombination protein RecR [Lactobacillus jensenii 1153] gi|238832022|gb|EEQ24347.1| recombination protein RecR [Lactobacillus jensenii 269-3] gi|239529965|gb|EEQ68966.1| recombination protein RecR [Lactobacillus jensenii 1153] gi|260561406|gb|EEX27379.1| recombination protein RecR [Lactobacillus jensenii SJ-7A-US] gi|281301343|gb|EFA93640.1| recombination protein RecR [Lactobacillus jensenii 208-1] Length = 199 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ ++PG G ++A R + + E + ++A+ ++ + CSICGN Sbjct: 3 YPLPIARLIESYMKLPGIGEKTATRLAFYTLDMPEDDVEQFSQALKDVKTLLHQCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D RD S ++VVE D+ A E + +YHVL G LSP++ IGPEDI Sbjct: 63 ITETDPCQICRDSNRDHSTVMVVEQPKDVMAFEEMGEYDGMYHVLHGVLSPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI LK +K+TRLA G+ +G++++ Sbjct: 123 NIKSLITRLQKDDDIKEIIIALNSTPEGESTAMYIAKLLKPAGLKVTRLASGLAVGTDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRINL 199 >gi|317492875|ref|ZP_07951299.1| recombination protein RecR [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918997|gb|EFV40332.1| recombination protein RecR [Enterobacteriaceae bacterium 9_2_54FAA] Length = 201 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 113/196 (57%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R H++++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHMLQRDRSGGMRLAQALTRAMSEIGHCEDCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDICTICSNSRRKENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPQD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + + E+I A + T+EG+ TA+YI + V TR+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLGQEPLTEVILATNPTVEGEATANYIAEMCSAHGVLATRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRNP 198 >gi|89056369|ref|YP_511820.1| recombination protein RecR [Jannaschia sp. CCS1] gi|122497564|sp|Q28KG7|RECR_JANSC RecName: Full=Recombination protein recR gi|88865918|gb|ABD56795.1| recombination protein RecR [Jannaschia sp. CCS1] Length = 199 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 108/196 (55%), Positives = 137/196 (69%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T K+IE LI I+AR+PG GPRSARRA L L+KK+ L+ PLAE MA + C CGN Sbjct: 4 TSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVNCGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T D C IC+D +R I VVEDVADLWA+ER +A YHVLGG+LS LD +GPED+ Sbjct: 64 IGTGDLCEICMDVRRATGEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGPEDL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L R+ + I E+I A++AT++GQTTAHYI D+L V ++ LA G+P+G ELDY Sbjct: 124 RIPKLRARMADEGITEVILALNATVDGQTTAHYIADELAPTGVTLSSLAQGVPIGGELDY 183 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R L Sbjct: 184 LDDGTISAALRARKSL 199 >gi|219850062|ref|YP_002464495.1| recombination protein RecR [Chloroflexus aggregans DSM 9485] gi|254790758|sp|B8G7M4|RECR_CHLAD RecName: Full=Recombination protein recR gi|219544321|gb|ACL26059.1| recombination protein RecR [Chloroflexus aggregans DSM 9485] Length = 205 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 113/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ AR+PG GP++A R T +L++ + + LA+A+ ++ +V C C N+ Sbjct: 13 PVARLIEEFARLPGIGPKTASRLTFYLLRAEPKQAQALAQAILDVKAQVGYCRRCFNITV 72 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC D RD + I VVE+ D+ A+ER+ A LYHVL G ++PL+ I ED+ I Sbjct: 73 DELCPICRDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLKID 132 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R+ + + E+I A + EG+ TA ++ L + V++TR A G+P G +L++ D Sbjct: 133 ELIARVRSEPVNEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGGDLEWADP 192 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R L Sbjct: 193 ETLGSALEGRREL 205 >gi|308233499|ref|ZP_07664236.1| DNA replication and repair protein RecR [Atopobium vaginae DSM 15829] gi|328943417|ref|ZP_08240882.1| recombination protein R [Atopobium vaginae DSM 15829] gi|327491386|gb|EGF23160.1| recombination protein R [Atopobium vaginae DSM 15829] Length = 200 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 126/200 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + + ++ ++ R+PG GP+SA+R L++ ++ L+ A+ N+ V C Sbjct: 1 MGQTSNQALQFVLDEFGRLPGIGPKSAQRIAYFLMEADDETARRLSRAILNLKEHVHFCP 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C T D CA+C D RD S + VV + D+ ++E++ + LYHVLGG +SP+D+IG Sbjct: 61 VCFAYATDDVCALCNDSTRDVSKVCVVCEPRDIASIEKTGVYHGLYHVLGGVISPMDKIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 PE + ++ L+ R+ +I+E+I A++ T+EG+TTA Y+ +K + ++ TRLA G+P+G Sbjct: 121 PEQLHVKELLARLAGDEIKEVILAMNPTVEGETTATYLARTIKTLGIQTTRLASGLPVGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y+D+ T+ AI +R + Sbjct: 181 DLEYVDEVTLGRAIEARHEM 200 >gi|261822476|ref|YP_003260582.1| recombination protein RecR [Pectobacterium wasabiae WPP163] gi|261606489|gb|ACX88975.1| recombination protein RecR [Pectobacterium wasabiae WPP163] Length = 201 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLGRLEERLQVESINEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQP 198 >gi|168493573|ref|ZP_02717716.1| recombination protein RecR [Streptococcus pneumoniae CDC3059-06] gi|270292367|ref|ZP_06198578.1| recombination protein RecR [Streptococcus sp. M143] gi|293365896|ref|ZP_06612599.1| recombination protein R [Streptococcus oralis ATCC 35037] gi|303255993|ref|ZP_07342021.1| recombination protein RecR [Streptococcus pneumoniae BS455] gi|306824761|ref|ZP_07458105.1| recombination protein R [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|307702299|ref|ZP_07639257.1| recombination protein RecR [Streptococcus oralis ATCC 35037] gi|307707462|ref|ZP_07643944.1| recombination protein RecR [Streptococcus mitis NCTC 12261] gi|315613599|ref|ZP_07888506.1| recombination protein R [Streptococcus sanguinis ATCC 49296] gi|183576463|gb|EDT96991.1| recombination protein RecR [Streptococcus pneumoniae CDC3059-06] gi|270278346|gb|EFA24192.1| recombination protein RecR [Streptococcus sp. M143] gi|291315574|gb|EFE56024.1| recombination protein R [Streptococcus oralis ATCC 35037] gi|302597052|gb|EFL64170.1| recombination protein RecR [Streptococcus pneumoniae BS455] gi|304432972|gb|EFM35944.1| recombination protein R [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|307616414|gb|EFN95605.1| recombination protein RecR [Streptococcus mitis NCTC 12261] gi|307624102|gb|EFO03081.1| recombination protein RecR [Streptococcus oralis ATCC 35037] gi|315314290|gb|EFU62335.1| recombination protein R [Streptococcus sanguinis ATCC 49296] gi|327389858|gb|EGE88203.1| recombination protein RecR [Streptococcus pneumoniae GA04375] gi|332072840|gb|EGI83321.1| recombination protein RecR [Streptococcus pneumoniae GA17545] Length = 198 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|152969027|ref|YP_001334136.1| recombination protein RecR [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893442|ref|YP_002918176.1| recombination protein RecR [Klebsiella pneumoniae NTUH-K2044] gi|262041605|ref|ZP_06014800.1| recombination protein RecR [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330002984|ref|ZP_08304509.1| recombination protein RecR [Klebsiella sp. MS 92-3] gi|166221945|sp|A6T5N5|RECR_KLEP7 RecName: Full=Recombination protein recR gi|150953876|gb|ABR75906.1| recombination protein RecR [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545758|dbj|BAH62109.1| recombination protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041031|gb|EEW42107.1| recombination protein RecR [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537095|gb|EGF63374.1| recombination protein RecR [Klebsiella sp. MS 92-3] Length = 201 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQYSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|295096737|emb|CBK85827.1| DNA replication and repair protein RecR [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 201 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|300312972|ref|YP_003777064.1| recombinational DNA repair protein [Herbaspirillum seropedicae SmR1] gi|300075757|gb|ADJ65156.1| rocombinational DNA repair protein [Herbaspirillum seropedicae SmR1] Length = 198 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 110/195 (56%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L L R+PG GP++A+R HL++ L++++A + + C++C Sbjct: 3 TPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C C D QRD + + VVE +D +E++ LY VL G LSPLD IGP DI Sbjct: 63 FTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPRDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ LI R + E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y Sbjct: 123 HLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182 Query: 186 LDDGTIFEAIRSRTV 200 +D GTI A+ R Sbjct: 183 VDAGTIARAMLDRRT 197 >gi|150005488|ref|YP_001300232.1| recombination protein RecR [Bacteroides vulgatus ATCC 8482] gi|237710673|ref|ZP_04541154.1| recombination protein recR [Bacteroides sp. 9_1_42FAA] gi|237727063|ref|ZP_04557544.1| recombination protein recR [Bacteroides sp. D4] gi|265750346|ref|ZP_06086409.1| recombination protein RecR [Bacteroides sp. 3_1_33FAA] gi|294778690|ref|ZP_06744109.1| recombination protein RecR [Bacteroides vulgatus PC510] gi|319640712|ref|ZP_07995426.1| recombination protein recR [Bacteroides sp. 3_1_40A] gi|166221923|sp|A6L4J6|RECR_BACV8 RecName: Full=Recombination protein recR gi|149933912|gb|ABR40610.1| recombination protein recR [Bacteroides vulgatus ATCC 8482] gi|229433919|gb|EEO43996.1| recombination protein recR [Bacteroides dorei 5_1_36/D4] gi|229455395|gb|EEO61116.1| recombination protein recR [Bacteroides sp. 9_1_42FAA] gi|263237242|gb|EEZ22692.1| recombination protein RecR [Bacteroides sp. 3_1_33FAA] gi|294447346|gb|EFG15927.1| recombination protein RecR [Bacteroides vulgatus PC510] gi|317387674|gb|EFV68539.1| recombination protein recR [Bacteroides sp. 3_1_40A] Length = 205 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 129/199 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ ++ AM + ++V C Sbjct: 1 MNQQYPSMLLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 KVCHNISDTETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G Sbjct: 121 GPSDLQIESLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSIINRT 199 >gi|227115286|ref|ZP_03828942.1| recombination protein RecR [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 201 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 116/196 (59%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + I VVE AD++A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIYAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQP 198 >gi|254524485|ref|ZP_05136540.1| recombination protein RecR [Stenotrophomonas sp. SKA14] gi|219722076|gb|EED40601.1| recombination protein RecR [Stenotrophomonas sp. SKA14] Length = 199 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 117/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI L +PG G ++A+R HL++++ + LAE +A ++ C+ C Sbjct: 1 MSAPLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAETLALAVERIGHCAQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP + Sbjct: 61 DFSETELCPTCANSSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G++ L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+ Sbjct: 121 LGLEQLENRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ A +R+ Sbjct: 181 YVDRGTLSHAFGTRSE 196 >gi|261252408|ref|ZP_05944981.1| recombination protein RecR [Vibrio orientalis CIP 102891] gi|260935799|gb|EEX91788.1| recombination protein RecR [Vibrio orientalis CIP 102891] Length = 200 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCSECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQENGQMCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCREHQVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRQKL 199 >gi|238027058|ref|YP_002911289.1| recombination protein RecR [Burkholderia glumae BGR1] gi|237876252|gb|ACR28585.1| Recombination protein RecR [Burkholderia glumae BGR1] Length = 198 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L +++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGQSLLFATQHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD S++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|206577691|ref|YP_002240026.1| recombination protein RecR [Klebsiella pneumoniae 342] gi|288936779|ref|YP_003440838.1| recombination protein RecR [Klebsiella variicola At-22] gi|290510166|ref|ZP_06549536.1| recombination protein RecR [Klebsiella sp. 1_1_55] gi|226726305|sp|B5Y0N5|RECR_KLEP3 RecName: Full=Recombination protein recR gi|206566749|gb|ACI08525.1| recombination protein RecR [Klebsiella pneumoniae 342] gi|288891488|gb|ADC59806.1| recombination protein RecR [Klebsiella variicola At-22] gi|289776882|gb|EFD84880.1| recombination protein RecR [Klebsiella sp. 1_1_55] Length = 201 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|229496601|ref|ZP_04390315.1| recombination protein RecR [Porphyromonas endodontalis ATCC 35406] gi|229316498|gb|EEN82417.1| recombination protein RecR [Porphyromonas endodontalis ATCC 35406] Length = 206 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 121/199 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K K +E + L+ +PG G ++A R L+++++ E L ++ + + C Sbjct: 1 MTSKYPSKWLEKAVDQLSLLPGVGRKTALRLALYILRRPESFANLLGSSIIELRENIIYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ + C IC D RD I VVE++ D+ ++ER+ LYHVLGG +SP+D I Sbjct: 61 ERCHNISDSPCCPICSDPSRDTQTICVVENIRDVMSIERTAQYKGLYHVLGGVISPIDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P+D+ I+SL+ER+ ++I+E+I AIS T+EG+TT YI +L + V ++ L+ GI MG Sbjct: 121 APQDLEIESLVERVPREQIKEVILAISPTMEGETTNFYIYKRLAPLGVHVSLLSRGIAMG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ A+R R+ Sbjct: 181 DELEYTDEVTLARALRDRS 199 >gi|169834528|ref|YP_001695053.1| recombination protein RecR [Streptococcus pneumoniae Hungary19A-6] gi|307709607|ref|ZP_07646060.1| recombination protein RecR [Streptococcus mitis SK564] gi|238688352|sp|B1I734|RECR_STRPI RecName: Full=Recombination protein recR gi|168997030|gb|ACA37642.1| recombination protein RecR [Streptococcus pneumoniae Hungary19A-6] gi|307619643|gb|EFN98766.1| recombination protein RecR [Streptococcus mitis SK564] Length = 198 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CS+CG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSVCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|238919042|ref|YP_002932556.1| recombination protein RecR, [Edwardsiella ictaluri 93-146] gi|259563695|sp|C5BD00|RECR_EDWI9 RecName: Full=Recombination protein recR gi|238868610|gb|ACR68321.1| recombination protein RecR, putative [Edwardsiella ictaluri 93-146] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRT 62 Query: 66 VDTTDPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + ++R+ I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRHP 198 >gi|108801866|ref|YP_642063.1| recombination protein RecR [Mycobacterium sp. MCS] gi|119871019|ref|YP_940971.1| recombination protein RecR [Mycobacterium sp. KMS] gi|126437834|ref|YP_001073525.1| recombination protein RecR [Mycobacterium sp. JLS] gi|123177963|sp|Q1B277|RECR_MYCSS RecName: Full=Recombination protein recR gi|171769261|sp|A1UMX3|RECR_MYCSK RecName: Full=Recombination protein recR gi|171855239|sp|A3Q7A7|RECR_MYCSJ RecName: Full=Recombination protein recR gi|108772285|gb|ABG11007.1| DNA replication and repair protein RecR [Mycobacterium sp. MCS] gi|119697108|gb|ABL94181.1| DNA replication and repair protein RecR [Mycobacterium sp. KMS] gi|126237634|gb|ABO01035.1| DNA replication and repair protein RecR [Mycobacterium sp. JLS] Length = 203 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L + I + V C +CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRIRDGVKFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV D C IC D +RDAS++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSDADRCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + + E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|253687473|ref|YP_003016663.1| recombination protein RecR [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259563702|sp|C6DB85|RECR_PECCP RecName: Full=Recombination protein recR gi|251754051|gb|ACT12127.1| recombination protein RecR [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQP 198 >gi|261341082|ref|ZP_05968940.1| recombination protein RecR [Enterobacter cancerogenus ATCC 35316] gi|288316756|gb|EFC55694.1| recombination protein RecR [Enterobacter cancerogenus ATCC 35316] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|194432682|ref|ZP_03064967.1| recombination protein RecR [Shigella dysenteriae 1012] gi|194418944|gb|EDX35028.1| recombination protein RecR [Shigella dysenteriae 1012] gi|332097006|gb|EGJ01990.1| recombination protein RecR [Shigella dysenteriae 155-74] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ + + C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSAIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|157146901|ref|YP_001454220.1| recombination protein RecR [Citrobacter koseri ATCC BAA-895] gi|166221931|sp|A8AJX1|RECR_CITK8 RecName: Full=Recombination protein recR gi|157084106|gb|ABV13784.1| hypothetical protein CKO_02677 [Citrobacter koseri ATCC BAA-895] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +++ E+I A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLASEQLSEVILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|90411568|ref|ZP_01219578.1| recombination protein RecR [Photobacterium profundum 3TCK] gi|90327458|gb|EAS43811.1| recombination protein RecR [Photobacterium profundum 3TCK] Length = 200 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R +L+++ Q LA+A++ + C C Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFNLLQRNRQGGLQLADALSRAMTDIGHCRDCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CA+C + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEDDICAVCANPRRQENGQICVVESPADIVAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ +L R++ + I ELI A + T+EG+ TAHYI + V TR+A+G+P+G EL+ Sbjct: 123 IGLDTLEFRLQKETIAELILATNPTVEGEATAHYIAELCHEYGVPATRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLAGRQKL 199 >gi|120406470|ref|YP_956299.1| recombination protein RecR [Mycobacterium vanbaalenii PYR-1] gi|171769172|sp|A1TGJ3|RECR_MYCVP RecName: Full=Recombination protein recR gi|119959288|gb|ABM16293.1| DNA replication and repair protein RecR [Mycobacterium vanbaalenii PYR-1] Length = 203 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L + + + V C++CG Sbjct: 1 MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNKVRDGVTFCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RDAS+I VVE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSDEERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI + ++ E+I A EG+ TA Y++ L+ + +TR+A G+PM Sbjct: 121 LRIRELLNRIGERVDGVEVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R + Sbjct: 181 GGDLEFADELTLGRALAGRRAM 202 >gi|298208096|ref|YP_003716275.1| recombination protein RecR [Croceibacter atlanticus HTCC2559] gi|83850737|gb|EAP88605.1| recombination protein RecR [Croceibacter atlanticus HTCC2559] Length = 205 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 123/196 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E ++ ++++PG G R+A R LHL+K+ E LA+A+ ++ ++ C+ Sbjct: 1 MDFSSKYLEQAVQEVSQLPGIGKRTALRLVLHLLKQPEDQTVSLAKALVDVKTQINFCTN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + +R++ + VVED+ D+ A+E + YHVLGG +SP+D +GP Sbjct: 61 CHNISDHKLCEICANPKRESQYVCVVEDIRDVMAIENTSQYRGHYHVLGGKISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I +L+++ + K+ E+IFA+S+T+EG TT YI +L+G +K + +A GI +G E Sbjct: 121 NQLNISTLVDKAKAGKVDEIIFALSSTLEGDTTNFYIFKQLEGTGIKTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEITLGRSILNR 196 >gi|15800201|ref|NP_286213.1| recombination protein RecR [Escherichia coli O157:H7 EDL933] gi|15829779|ref|NP_308552.1| recombination protein RecR [Escherichia coli O157:H7 str. Sakai] gi|16128456|ref|NP_415005.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|24111855|ref|NP_706365.1| recombination protein RecR [Shigella flexneri 2a str. 301] gi|30061972|ref|NP_836143.1| recombination protein RecR [Shigella flexneri 2a str. 2457T] gi|74311051|ref|YP_309470.1| recombination protein RecR [Shigella sonnei Ss046] gi|89107341|ref|AP_001121.1| gap repair protein [Escherichia coli str. K-12 substr. W3110] gi|91209546|ref|YP_539532.1| recombination protein RecR [Escherichia coli UTI89] gi|110804499|ref|YP_688019.1| recombination protein RecR [Shigella flexneri 5 str. 8401] gi|117622729|ref|YP_851642.1| recombination protein RecR [Escherichia coli APEC O1] gi|157157829|ref|YP_001461661.1| recombination protein RecR [Escherichia coli E24377A] gi|157159999|ref|YP_001457317.1| recombination protein RecR [Escherichia coli HS] gi|168747850|ref|ZP_02772872.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4113] gi|168754579|ref|ZP_02779586.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4401] gi|168760371|ref|ZP_02785378.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4501] gi|168768429|ref|ZP_02793436.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4486] gi|168777170|ref|ZP_02802177.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4196] gi|168778967|ref|ZP_02803974.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4076] gi|168786325|ref|ZP_02811332.1| recombination protein RecR [Escherichia coli O157:H7 str. EC869] gi|168798038|ref|ZP_02823045.1| recombination protein RecR [Escherichia coli O157:H7 str. EC508] gi|170021140|ref|YP_001726094.1| recombination protein RecR [Escherichia coli ATCC 8739] gi|170080057|ref|YP_001729377.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|170682989|ref|YP_001742616.1| recombination protein RecR [Escherichia coli SMS-3-5] gi|187730170|ref|YP_001879181.1| recombination protein RecR [Shigella boydii CDC 3083-94] gi|188491938|ref|ZP_02999208.1| recombination protein RecR [Escherichia coli 53638] gi|191167493|ref|ZP_03029306.1| recombination protein RecR [Escherichia coli B7A] gi|193064133|ref|ZP_03045217.1| recombination protein RecR [Escherichia coli E22] gi|193067582|ref|ZP_03048549.1| recombination protein RecR [Escherichia coli E110019] gi|194429036|ref|ZP_03061568.1| recombination protein RecR [Escherichia coli B171] gi|194437506|ref|ZP_03069603.1| recombination protein RecR [Escherichia coli 101-1] gi|195936035|ref|ZP_03081417.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4024] gi|208806900|ref|ZP_03249237.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4206] gi|208814945|ref|ZP_03256124.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4045] gi|208822864|ref|ZP_03263182.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4042] gi|209396018|ref|YP_002269122.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4115] gi|209917688|ref|YP_002291772.1| recombination protein RecR [Escherichia coli SE11] gi|215485552|ref|YP_002327983.1| recombination protein RecR [Escherichia coli O127:H6 str. E2348/69] gi|217325942|ref|ZP_03442026.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14588] gi|218549860|ref|YP_002383651.1| recombination protein RecR [Escherichia fergusonii ATCC 35469] gi|218553038|ref|YP_002385951.1| recombination protein RecR [Escherichia coli IAI1] gi|218557382|ref|YP_002390295.1| recombination protein RecR [Escherichia coli S88] gi|218688335|ref|YP_002396547.1| recombination protein RecR [Escherichia coli ED1a] gi|218693934|ref|YP_002401601.1| recombination protein RecR [Escherichia coli 55989] gi|218698616|ref|YP_002406245.1| recombination protein RecR [Escherichia coli IAI39] gi|227884515|ref|ZP_04002320.1| recombination protein RecR [Escherichia coli 83972] gi|237707530|ref|ZP_04538011.1| recombination protein recR [Escherichia sp. 3_2_53FAA] gi|238899759|ref|YP_002925555.1| gap repair protein [Escherichia coli BW2952] gi|253774538|ref|YP_003037369.1| recombination protein RecR [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160541|ref|YP_003043649.1| recombination protein RecR [Escherichia coli B str. REL606] gi|254791655|ref|YP_003076492.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14359] gi|256020443|ref|ZP_05434308.1| recombination protein RecR [Shigella sp. D9] gi|256023910|ref|ZP_05437775.1| recombination protein RecR [Escherichia sp. 4_1_40B] gi|260842672|ref|YP_003220450.1| gap repair protein RecR [Escherichia coli O103:H2 str. 12009] gi|260853695|ref|YP_003227586.1| gap repair protein RecR [Escherichia coli O26:H11 str. 11368] gi|260866633|ref|YP_003233035.1| gap repair protein RecR [Escherichia coli O111:H- str. 11128] gi|261223954|ref|ZP_05938235.1| gap repair protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256332|ref|ZP_05948865.1| gap repair protein RecR [Escherichia coli O157:H7 str. FRIK966] gi|291281378|ref|YP_003498196.1| Recombination protein recR [Escherichia coli O55:H7 str. CB9615] gi|293408621|ref|ZP_06652460.1| recombination protein RecR [Escherichia coli B354] gi|293413725|ref|ZP_06656374.1| recombination protein RecR [Escherichia coli B185] gi|293418541|ref|ZP_06660976.1| recombination protein RecR [Escherichia coli B088] gi|297519065|ref|ZP_06937451.1| recombination protein RecR [Escherichia coli OP50] gi|300818194|ref|ZP_07098405.1| recombination protein RecR [Escherichia coli MS 107-1] gi|300820281|ref|ZP_07100433.1| recombination protein RecR [Escherichia coli MS 119-7] gi|300903257|ref|ZP_07121186.1| recombination protein RecR [Escherichia coli MS 84-1] gi|300919877|ref|ZP_07136344.1| recombination protein RecR [Escherichia coli MS 115-1] gi|300924200|ref|ZP_07140192.1| recombination protein RecR [Escherichia coli MS 182-1] gi|300930223|ref|ZP_07145637.1| recombination protein RecR [Escherichia coli MS 187-1] gi|300935750|ref|ZP_07150715.1| recombination protein RecR [Escherichia coli MS 21-1] gi|300947871|ref|ZP_07162021.1| recombination protein RecR [Escherichia coli MS 116-1] gi|300958041|ref|ZP_07170205.1| recombination protein RecR [Escherichia coli MS 175-1] gi|300987888|ref|ZP_07178437.1| recombination protein RecR [Escherichia coli MS 45-1] gi|301022521|ref|ZP_07186395.1| recombination protein RecR [Escherichia coli MS 69-1] gi|301023019|ref|ZP_07186829.1| recombination protein RecR [Escherichia coli MS 196-1] gi|301049681|ref|ZP_07196629.1| recombination protein RecR [Escherichia coli MS 185-1] gi|301301626|ref|ZP_07207761.1| recombination protein RecR [Escherichia coli MS 124-1] gi|301330660|ref|ZP_07223262.1| recombination protein RecR [Escherichia coli MS 78-1] gi|301647401|ref|ZP_07247211.1| recombination protein RecR [Escherichia coli MS 146-1] gi|306813061|ref|ZP_07447254.1| recombination protein RecR [Escherichia coli NC101] gi|307137116|ref|ZP_07496472.1| recombination protein RecR [Escherichia coli H736] gi|307314967|ref|ZP_07594556.1| recombination protein RecR [Escherichia coli W] gi|309794792|ref|ZP_07689213.1| recombination protein RecR [Escherichia coli MS 145-7] gi|312964463|ref|ZP_07778757.1| recombination protein RecR [Escherichia coli 2362-75] gi|312970571|ref|ZP_07784752.1| recombination protein RecR [Escherichia coli 1827-70] gi|331640996|ref|ZP_08342131.1| recombination protein RecR [Escherichia coli H736] gi|331645658|ref|ZP_08346761.1| recombination protein RecR [Escherichia coli M605] gi|331651412|ref|ZP_08352437.1| recombination protein RecR [Escherichia coli M718] gi|331656530|ref|ZP_08357492.1| recombination protein RecR [Escherichia coli TA206] gi|331661855|ref|ZP_08362778.1| recombination protein RecR [Escherichia coli TA143] gi|331666832|ref|ZP_08367706.1| recombination protein RecR [Escherichia coli TA271] gi|331672014|ref|ZP_08372810.1| recombination protein RecR [Escherichia coli TA280] gi|331676146|ref|ZP_08376858.1| recombination protein RecR [Escherichia coli H591] gi|332281624|ref|ZP_08394037.1| recombination protein recR [Shigella sp. D9] gi|67471985|sp|P0A7H6|RECR_ECOLI RecName: Full=Recombination protein recR gi|67471986|sp|P0A7H7|RECR_ECOL6 RecName: Full=Recombination protein recR gi|67471987|sp|P0A7H8|RECR_ECO57 RecName: Full=Recombination protein recR gi|67471988|sp|P0A7H9|RECR_SHIFL RecName: Full=Recombination protein recR gi|122424726|sp|Q1RF63|RECR_ECOUT RecName: Full=Recombination protein recR gi|123343097|sp|Q0T7B2|RECR_SHIF8 RecName: Full=Recombination protein recR gi|123617861|sp|Q3Z4S7|RECR_SHISS RecName: Full=Recombination protein recR gi|166221937|sp|A1A8D8|RECR_ECOK1 RecName: Full=Recombination protein recR gi|166918738|sp|A7ZIN2|RECR_ECO24 RecName: Full=Recombination protein recR gi|166918739|sp|A7ZXD0|RECR_ECOHS RecName: Full=Recombination protein recR gi|189029361|sp|B1IZC2|RECR_ECOLC RecName: Full=Recombination protein recR gi|226726302|sp|B5Z3Y2|RECR_ECO5E RecName: Full=Recombination protein recR gi|226726303|sp|B6I0C4|RECR_ECOSE RecName: Full=Recombination protein recR gi|226738999|sp|B7MDZ4|RECR_ECO45 RecName: Full=Recombination protein recR gi|226739000|sp|B7NIF8|RECR_ECO7I RecName: Full=Recombination protein recR gi|226739001|sp|B7M3W4|RECR_ECO8A RecName: Full=Recombination protein recR gi|226739003|sp|B1LJM9|RECR_ECOSM RecName: Full=Recombination protein recR gi|226739004|sp|B7LLP8|RECR_ESCF3 RecName: Full=Recombination protein recR gi|229470342|sp|B2U4S5|RECR_SHIB3 RecName: Full=Recombination protein recR gi|229890148|sp|B1XFQ9|RECR_ECODH RecName: Full=Recombination protein recR gi|254790766|sp|B7UKF2|RECR_ECO27 RecName: Full=Recombination protein recR gi|254790767|sp|B7L797|RECR_ECO55 RecName: Full=Recombination protein recR gi|254790768|sp|B7MQI7|RECR_ECO81 RecName: Full=Recombination protein recR gi|259563694|sp|C4ZUS6|RECR_ECOBW RecName: Full=Recombination protein recR gi|12513342|gb|AAG54821.1|AE005226_4 recombination and repair [Escherichia coli O157:H7 str. EDL933] gi|42697|emb|CAA33768.1| unnamed protein product [Escherichia coli K-12] gi|1773154|gb|AAB40226.1| recR [Escherichia coli] gi|1786678|gb|AAC73574.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|13359982|dbj|BAB33948.1| recombination protein RecR [Escherichia coli O157:H7 str. Sakai] gi|24050650|gb|AAN42072.1| recombination protein RecR [Shigella flexneri 2a str. 301] gi|30040216|gb|AAP15949.1| recombination protein RecR [Shigella flexneri 2a str. 2457T] gi|73854528|gb|AAZ87235.1| recombination and repair [Shigella sonnei Ss046] gi|85674611|dbj|BAE76251.1| gap repair protein [Escherichia coli str. K12 substr. W3110] gi|91071120|gb|ABE06001.1| recombination and repair protein RecR [Escherichia coli UTI89] gi|110614047|gb|ABF02714.1| recombination and repair [Shigella flexneri 5 str. 8401] gi|115511853|gb|ABI99927.1| recombination protein RecR [Escherichia coli APEC O1] gi|157065679|gb|ABV04934.1| recombination protein RecR [Escherichia coli HS] gi|157079859|gb|ABV19567.1| recombination protein RecR [Escherichia coli E24377A] gi|169756068|gb|ACA78767.1| recombination protein RecR [Escherichia coli ATCC 8739] gi|169887892|gb|ACB01599.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|170520707|gb|ACB18885.1| recombination protein RecR [Escherichia coli SMS-3-5] gi|187427162|gb|ACD06436.1| recombination protein RecR [Shigella boydii CDC 3083-94] gi|187767554|gb|EDU31398.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4196] gi|188017689|gb|EDU55811.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4113] gi|188487137|gb|EDU62240.1| recombination protein RecR [Escherichia coli 53638] gi|189002997|gb|EDU71983.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4076] gi|189357959|gb|EDU76378.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4401] gi|189362411|gb|EDU80830.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4486] gi|189369096|gb|EDU87512.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4501] gi|189373699|gb|EDU92115.1| recombination protein RecR [Escherichia coli O157:H7 str. EC869] gi|189379340|gb|EDU97756.1| recombination protein RecR [Escherichia coli O157:H7 str. EC508] gi|190902449|gb|EDV62185.1| recombination protein RecR [Escherichia coli B7A] gi|192929162|gb|EDV82772.1| recombination protein RecR [Escherichia coli E22] gi|192958994|gb|EDV89430.1| recombination protein RecR [Escherichia coli E110019] gi|194412973|gb|EDX29263.1| recombination protein RecR [Escherichia coli B171] gi|194423675|gb|EDX39665.1| recombination protein RecR [Escherichia coli 101-1] gi|208726701|gb|EDZ76302.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4206] gi|208731593|gb|EDZ80281.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4045] gi|208737057|gb|EDZ84741.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4042] gi|209157418|gb|ACI34851.1| recombination protein RecR [Escherichia coli O157:H7 str. EC4115] gi|209778368|gb|ACI87496.1| recombination protein RecR [Escherichia coli] gi|209778370|gb|ACI87497.1| recombination protein RecR [Escherichia coli] gi|209778372|gb|ACI87498.1| recombination protein RecR [Escherichia coli] gi|209778374|gb|ACI87499.1| recombination protein RecR [Escherichia coli] gi|209778376|gb|ACI87500.1| recombination protein RecR [Escherichia coli] gi|209910947|dbj|BAG76021.1| recombination protein RecR [Escherichia coli SE11] gi|215263624|emb|CAS07955.1| gap repair protein RecR [Escherichia coli O127:H6 str. E2348/69] gi|217322163|gb|EEC30587.1| recombination protein RecR [Escherichia coli O157:H7 str. TW14588] gi|218350666|emb|CAU96358.1| gap repair protein [Escherichia coli 55989] gi|218357401|emb|CAQ90040.1| gap repair protein [Escherichia fergusonii ATCC 35469] gi|218359806|emb|CAQ97347.1| gap repair protein [Escherichia coli IAI1] gi|218364151|emb|CAR01816.1| gap repair protein [Escherichia coli S88] gi|218368602|emb|CAR16339.1| gap repair protein [Escherichia coli IAI39] gi|218425899|emb|CAR06705.1| gap repair protein [Escherichia coli ED1a] gi|222032266|emb|CAP75005.1| Recombination protein recR [Escherichia coli LF82] gi|226898740|gb|EEH84999.1| recombination protein recR [Escherichia sp. 3_2_53FAA] gi|227838601|gb|EEJ49067.1| recombination protein RecR [Escherichia coli 83972] gi|238861286|gb|ACR63284.1| gap repair protein [Escherichia coli BW2952] gi|253325582|gb|ACT30184.1| recombination protein RecR [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972442|gb|ACT38113.1| recombination protein RecR [Escherichia coli B str. REL606] gi|253976652|gb|ACT42322.1| recombination protein RecR [Escherichia coli BL21(DE3)] gi|254591055|gb|ACT70416.1| gap repair protein [Escherichia coli O157:H7 str. TW14359] gi|257752344|dbj|BAI23846.1| gap repair protein RecR [Escherichia coli O26:H11 str. 11368] gi|257757819|dbj|BAI29316.1| gap repair protein RecR [Escherichia coli O103:H2 str. 12009] gi|257762989|dbj|BAI34484.1| gap repair protein RecR [Escherichia coli O111:H- str. 11128] gi|260450342|gb|ACX40764.1| recombination protein RecR [Escherichia coli DH1] gi|281177642|dbj|BAI53972.1| recombination protein RecR [Escherichia coli SE15] gi|281599811|gb|ADA72795.1| Recombination protein recR [Shigella flexneri 2002017] gi|284920281|emb|CBG33340.1| recombination protein [Escherichia coli 042] gi|290761251|gb|ADD55212.1| Recombination protein recR [Escherichia coli O55:H7 str. CB9615] gi|291325069|gb|EFE64484.1| recombination protein RecR [Escherichia coli B088] gi|291433783|gb|EFF06756.1| recombination protein RecR [Escherichia coli B185] gi|291471799|gb|EFF14282.1| recombination protein RecR [Escherichia coli B354] gi|294493990|gb|ADE92746.1| recombination protein RecR [Escherichia coli IHE3034] gi|299880982|gb|EFI89193.1| recombination protein RecR [Escherichia coli MS 196-1] gi|300298574|gb|EFJ54959.1| recombination protein RecR [Escherichia coli MS 185-1] gi|300315308|gb|EFJ65092.1| recombination protein RecR [Escherichia coli MS 175-1] gi|300397482|gb|EFJ81020.1| recombination protein RecR [Escherichia coli MS 69-1] gi|300404696|gb|EFJ88234.1| recombination protein RecR [Escherichia coli MS 84-1] gi|300407628|gb|EFJ91166.1| recombination protein RecR [Escherichia coli MS 45-1] gi|300413093|gb|EFJ96403.1| recombination protein RecR [Escherichia coli MS 115-1] gi|300419653|gb|EFK02964.1| recombination protein RecR [Escherichia coli MS 182-1] gi|300452549|gb|EFK16169.1| recombination protein RecR [Escherichia coli MS 116-1] gi|300459050|gb|EFK22543.1| recombination protein RecR [Escherichia coli MS 21-1] gi|300461878|gb|EFK25371.1| recombination protein RecR [Escherichia coli MS 187-1] gi|300527066|gb|EFK48135.1| recombination protein RecR [Escherichia coli MS 119-7] gi|300529085|gb|EFK50147.1| recombination protein RecR [Escherichia coli MS 107-1] gi|300843123|gb|EFK70883.1| recombination protein RecR [Escherichia coli MS 124-1] gi|300843321|gb|EFK71081.1| recombination protein RecR [Escherichia coli MS 78-1] gi|301074456|gb|EFK89262.1| recombination protein RecR [Escherichia coli MS 146-1] gi|305853824|gb|EFM54263.1| recombination protein RecR [Escherichia coli NC101] gi|306905606|gb|EFN36137.1| recombination protein RecR [Escherichia coli W] gi|307552378|gb|ADN45153.1| recombination and repair protein RecR [Escherichia coli ABU 83972] gi|307628059|gb|ADN72363.1| recombination protein RecR [Escherichia coli UM146] gi|308121445|gb|EFO58707.1| recombination protein RecR [Escherichia coli MS 145-7] gi|309700732|emb|CBJ00028.1| recombination protein [Escherichia coli ETEC H10407] gi|310337220|gb|EFQ02358.1| recombination protein RecR [Escherichia coli 1827-70] gi|312290940|gb|EFR18816.1| recombination protein RecR [Escherichia coli 2362-75] gi|312945049|gb|ADR25876.1| recombination protein RecR [Escherichia coli O83:H1 str. NRG 857C] gi|313646898|gb|EFS11355.1| recombination protein RecR [Shigella flexneri 2a str. 2457T] gi|313848552|emb|CAQ30945.2| recombination and repair, subunit of RecFOR complex [Escherichia coli BL21(DE3)] gi|315059751|gb|ADT74078.1| gap repair protein [Escherichia coli W] gi|315135153|dbj|BAJ42312.1| recombination protein recR [Escherichia coli DH1] gi|315256302|gb|EFU36270.1| recombination protein RecR [Escherichia coli MS 85-1] gi|315289905|gb|EFU49295.1| recombination protein RecR [Escherichia coli MS 110-3] gi|315294236|gb|EFU53587.1| recombination protein RecR [Escherichia coli MS 153-1] gi|315297998|gb|EFU57268.1| recombination protein RecR [Escherichia coli MS 16-3] gi|315616586|gb|EFU97203.1| recombination protein RecR [Escherichia coli 3431] gi|320176554|gb|EFW51598.1| Recombination protein RecR [Shigella dysenteriae CDC 74-1112] gi|320181085|gb|EFW56005.1| Recombination protein RecR [Shigella boydii ATCC 9905] gi|320192890|gb|EFW67530.1| Recombination protein RecR [Escherichia coli O157:H7 str. EC1212] gi|320197051|gb|EFW71670.1| Recombination protein RecR [Escherichia coli WV_060327] gi|320201718|gb|EFW76294.1| Recombination protein RecR [Escherichia coli EC4100B] gi|320638466|gb|EFX08180.1| recombination protein RecR [Escherichia coli O157:H7 str. G5101] gi|320643847|gb|EFX12970.1| recombination protein RecR [Escherichia coli O157:H- str. 493-89] gi|320649198|gb|EFX17776.1| recombination protein RecR [Escherichia coli O157:H- str. H 2687] gi|320656091|gb|EFX24007.1| recombination protein RecR [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661241|gb|EFX28672.1| recombination protein RecR [Escherichia coli O55:H7 str. USDA 5905] gi|320665217|gb|EFX32310.1| recombination protein RecR [Escherichia coli O157:H7 str. LSU-61] gi|323153374|gb|EFZ39629.1| recombination protein RecR [Escherichia coli EPECa14] gi|323164278|gb|EFZ50085.1| recombination protein RecR [Shigella sonnei 53G] gi|323170568|gb|EFZ56218.1| recombination protein RecR [Escherichia coli LT-68] gi|323178253|gb|EFZ63831.1| recombination protein RecR [Escherichia coli 1180] gi|323184697|gb|EFZ70068.1| recombination protein RecR [Escherichia coli 1357] gi|323379684|gb|ADX51952.1| recombination protein RecR [Escherichia coli KO11] gi|323938658|gb|EGB34907.1| recombination protein RecR [Escherichia coli E1520] gi|323943277|gb|EGB39433.1| recombination protein RecR [Escherichia coli E482] gi|323945255|gb|EGB41312.1| recombination protein RecR [Escherichia coli H120] gi|323952917|gb|EGB48785.1| recombination protein RecR [Escherichia coli H252] gi|323958540|gb|EGB54244.1| recombination protein RecR [Escherichia coli H263] gi|323963461|gb|EGB59023.1| recombination protein RecR [Escherichia coli H489] gi|323965158|gb|EGB60617.1| recombination protein RecR [Escherichia coli M863] gi|323972326|gb|EGB67536.1| recombination protein RecR [Escherichia coli TA007] gi|323976044|gb|EGB71137.1| recombination protein RecR [Escherichia coli TW10509] gi|324010053|gb|EGB79272.1| recombination protein RecR [Escherichia coli MS 57-2] gi|324016728|gb|EGB85947.1| recombination protein RecR [Escherichia coli MS 117-3] gi|324114697|gb|EGC08665.1| recombination protein RecR [Escherichia fergusonii B253] gi|324116960|gb|EGC10873.1| recombination protein RecR [Escherichia coli E1167] gi|325498240|gb|EGC96099.1| recombination protein RecR [Escherichia fergusonii ECD227] gi|326341238|gb|EGD65030.1| Recombination protein RecR [Escherichia coli O157:H7 str. 1044] gi|326345987|gb|EGD69726.1| Recombination protein RecR [Escherichia coli O157:H7 str. 1125] gi|327254799|gb|EGE66415.1| recombination protein RecR [Escherichia coli STEC_7v] gi|330910267|gb|EGH38777.1| recombination protein RecR [Escherichia coli AA86] gi|331037794|gb|EGI10014.1| recombination protein RecR [Escherichia coli H736] gi|331044410|gb|EGI16537.1| recombination protein RecR [Escherichia coli M605] gi|331051153|gb|EGI23205.1| recombination protein RecR [Escherichia coli M718] gi|331054778|gb|EGI26787.1| recombination protein RecR [Escherichia coli TA206] gi|331060277|gb|EGI32241.1| recombination protein RecR [Escherichia coli TA143] gi|331066056|gb|EGI37940.1| recombination protein RecR [Escherichia coli TA271] gi|331071003|gb|EGI42362.1| recombination protein RecR [Escherichia coli TA280] gi|331076204|gb|EGI47486.1| recombination protein RecR [Escherichia coli H591] gi|332094161|gb|EGI99212.1| recombination protein RecR [Shigella boydii 5216-82] gi|332103976|gb|EGJ07322.1| recombination protein recR [Shigella sp. D9] gi|332341838|gb|AEE55172.1| recombination protein RecR [Escherichia coli UMNK88] gi|332760765|gb|EGJ91053.1| recombination protein RecR [Shigella flexneri 4343-70] gi|332761449|gb|EGJ91731.1| recombination protein RecR [Shigella flexneri 2747-71] gi|332763775|gb|EGJ94013.1| recombination protein RecR [Shigella flexneri K-671] gi|332768397|gb|EGJ98581.1| recombination protein RecR [Shigella flexneri 2930-71] gi|333007767|gb|EGK27243.1| recombination protein RecR [Shigella flexneri K-218] gi|333008162|gb|EGK27637.1| recombination protein RecR [Shigella flexneri VA-6] gi|333009908|gb|EGK29343.1| recombination protein RecR [Shigella flexneri K-272] gi|333020742|gb|EGK40002.1| recombination protein RecR [Shigella flexneri K-227] gi|333021968|gb|EGK41216.1| recombination protein RecR [Shigella flexneri K-304] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|168483458|ref|ZP_02708410.1| recombination protein RecR [Streptococcus pneumoniae CDC1873-00] gi|172043140|gb|EDT51186.1| recombination protein RecR [Streptococcus pneumoniae CDC1873-00] Length = 198 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYRGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|26246487|ref|NP_752526.1| recombination protein RecR [Escherichia coli CFT073] gi|26106885|gb|AAN79070.1|AE016756_253 Recombination protein recR [Escherichia coli CFT073] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD +A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADXYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|163755946|ref|ZP_02163063.1| recombination protein recR [Kordia algicida OT-1] gi|161324117|gb|EDP95449.1| recombination protein recR [Kordia algicida OT-1] Length = 206 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 124/198 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +EN + ++++PG G R+A R LHL+++ E L A+ ++ ++ C Sbjct: 1 MEFSSKLLENAVNEISQLPGIGKRTALRLVLHLLRQPESQTLHLTNALQDLRTEIKHCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC + R +I VVED+ D+ A+E + LYHVLGG +SPLD IGP Sbjct: 61 CHNISDVEICDICRNVNRQQEIICVVEDIRDVMAIESTAQYKGLYHVLGGKISPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SL+E+++ K++E+IFA+S+T+EG TT YI +++ DVK + +A GI +G E Sbjct: 121 HNLTINSLVEKVKAGKVKEIIFALSSTMEGDTTNFYIYKQIEKYDVKTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSILNRVP 198 >gi|160914823|ref|ZP_02077037.1| hypothetical protein EUBDOL_00831 [Eubacterium dolichum DSM 3991] gi|158433363|gb|EDP11652.1| hypothetical protein EUBDOL_00831 [Eubacterium dolichum DSM 3991] Length = 196 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K E L++ +PG G ++A R ++ + + + A+ + + + CS+CG Sbjct: 1 MYPKRFEQLVEAYRHLPGVGLKTAERYAFETIEWDLETIDEIITALVEVRDGIKKCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D R+ +I VV+ D+ A+E++K + +YHVL G +S I PED Sbjct: 61 NLSEDNTCDICKDTSRNHEMICVVQSAKDVIAMEKTKEYHGVYHVLNGVISTSKGILPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I SL+ERI+ ++E+I A + T+EG+TTA Y+ L+ D+K+TR+A+G+PMG LD Sbjct: 121 INIDSLLERIDDH-VKEIILATNPTVEGETTAMYLSKLLEPYDIKVTRIAHGLPMGGHLD 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +AI +R + Sbjct: 180 YADELTLIKAIENRKKM 196 >gi|54308212|ref|YP_129232.1| recombination protein RecR [Photobacterium profundum SS9] gi|73621504|sp|Q6LTE6|RECR_PHOPR RecName: Full=Recombination protein recR gi|46912640|emb|CAG19430.1| putative recombinational DNA repair protein [Photobacterium profundum SS9] Length = 202 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R +L+++ Q LA+A+ + C C Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFNLLQRNRQGGLQLADALNRAMTDIGHCRDCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CA+C + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEDDICAVCANPRRQENGQICVVESPADIVAVESTGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ +L R++ + I ELI A + T+EG+ TAHYI + V TR+A+G+P+G EL+ Sbjct: 123 IGLDTLEFRLQKETIAELILATNPTVEGEATAHYIAELCHEYGVPATRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLAGRQKL 199 >gi|330813513|ref|YP_004357752.1| recombination protein RecR [Candidatus Pelagibacter sp. IMCC9063] gi|327486608|gb|AEA81013.1| recombination protein RecR [Candidatus Pelagibacter sp. IMCC9063] Length = 206 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 140/199 (70%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +++ LI +++++PG GP+S+RR L+L+K +E ++ PL++++ ++ K+ C++CGN Sbjct: 5 TEPDLDELIALVSKLPGLGPKSSRRIALYLLKNRENVMKPLSKSLEKVHAKIIRCNLCGN 64 Query: 66 VDT-TDPCAI--CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 + + C I C ++ I VVE++AD+WA+E + YH+LGG+LS L P Sbjct: 65 IKSKEVKCDIKKCSYSPKNYEQICVVENIADMWAMESTNVFQGHYHILGGTLSALGNSSP 124 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ED+ I SL+ RI+ KI+E+I A SATIEGQTTAHYI D +K + VK+T+LA+G+P+G E Sbjct: 125 EDLLINSLLNRIKENKIKEVILATSATIEGQTTAHYINDSIKDLGVKVTKLAHGLPVGGE 184 Query: 183 LDYLDDGTIFEAIRSRTVL 201 ++YLDDGT+F A + R+ L Sbjct: 185 IEYLDDGTLFSAFKFRSSL 203 >gi|283784299|ref|YP_003364164.1| recombination protein [Citrobacter rodentium ICC168] gi|282947753|emb|CBG87309.1| recombination protein [Citrobacter rodentium ICC168] Length = 201 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLSAEPLNEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 MVDGTTLSHSLAGRHKL 199 >gi|308048900|ref|YP_003912466.1| recombination protein RecR [Ferrimonas balearica DSM 9799] gi|307631090|gb|ADN75392.1| recombination protein RecR [Ferrimonas balearica DSM 9799] Length = 199 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LIK L +PG GPRSA+R T L+++ L EA++ + V C C Sbjct: 3 FSPRVDELIKALQCLPGVGPRSAQRMTFQLLERDRVAGTRLGEALSRAMSDVGHCQDCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC + +R + + VVE ADL A+E S + Y VL G LSPLD IGP+D Sbjct: 63 FTEQTRCPICDNPRRAEKGQLCVVESPADLLAIESSGQYDGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L + +E+I A + T+EG TA YI D + +++++R+A+G+P+G EL Sbjct: 123 IGLDVLDRMLAEGPWQEIILATNPTVEGDATAQYIADMARQREIRVSRIAHGVPVGGELG 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R + Sbjct: 183 YVDGTTLALSFSGRRDI 199 >gi|190573047|ref|YP_001970892.1| recombination protein RecR [Stenotrophomonas maltophilia K279a] gi|190010969|emb|CAQ44578.1| putative recombination protein RecR [Stenotrophomonas maltophilia K279a] Length = 199 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI L +PG G ++A+R HL++++ + LAE +A ++ C C Sbjct: 1 MSAPLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAETLALAVERIGHCVQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP + Sbjct: 61 DFSETELCPTCANGSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G++ L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+ Sbjct: 121 LGLEQLERRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ A +R+ Sbjct: 181 YVDRGTLSHAFGTRSE 196 >gi|145219840|ref|YP_001130549.1| recombination protein RecR [Prosthecochloris vibrioformis DSM 265] gi|189029367|sp|A4SEY8|RECR_PROVI RecName: Full=Recombination protein recR gi|145206004|gb|ABP37047.1| recombination protein RecR [Chlorobium phaeovibrioides DSM 265] Length = 204 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 5/203 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T IE LI A++PG G ++ARR +H++++ LA A+ + + V CSI Sbjct: 1 MRYTSAAIEALIDAFAKLPGVGRKTARRLAMHVLQQPRLEAERLASALLDAKDLVVRCSI 60 Query: 63 CGNVDTTD--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV D PC IC Q RD SVI VVE D+ A E++ LYHVL G +SPLD I Sbjct: 61 CQNVTDRDADPCRICTGQGRDQSVICVVESPVDVLAFEKTAHYKGLYHVLHGVISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKK---IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DI I+ L++R++ ++ +RE++ A++ T+EG+TT+ Y+ + + + +T++A GI Sbjct: 121 GPDDINIRELLQRLQPEEGGEVREIVLALNPTVEGETTSLYLSRLIAPLGIMVTKIARGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTV 200 P+G+EL+++D+ T+ A+ RT Sbjct: 181 PVGAELEFIDEATLSRAMEGRTT 203 >gi|311280616|ref|YP_003942847.1| recombination protein RecR [Enterobacter cloacae SCF1] gi|308749811|gb|ADO49563.1| recombination protein RecR [Enterobacter cloacae SCF1] Length = 201 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + + E+I A + T+EG+ TA+YI + + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAAETLSEVILATNPTVEGEATANYIAELCEQYGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|332142046|ref|YP_004427784.1| recombination protein RecR [Alteromonas macleodii str. 'Deep ecotype'] gi|327552068|gb|AEA98786.1| recombination protein RecR [Alteromonas macleodii str. 'Deep ecotype'] Length = 199 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L +PG G +SA+R HL+++ L+ + N + C C Sbjct: 3 FSPLLSELIQALTCLPGVGNKSAQRMAFHLLERNRTGAIDLSNVLHNAMEHIHHCKRCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+ Sbjct: 63 FTEDELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI +V +R+A+G+P+G EL+ Sbjct: 123 IGLTELEGRLSAGGINEVILATNPTVEGEATAHYIAQLCASHNVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A R L Sbjct: 183 YIDGNTLTHAFSGRRKL 199 >gi|77464285|ref|YP_353789.1| recombination protein RecR [Rhodobacter sphaeroides 2.4.1] gi|126463127|ref|YP_001044241.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17029] gi|221640169|ref|YP_002526431.1| recombination protein RecR [Rhodobacter sphaeroides KD131] gi|332559174|ref|ZP_08413496.1| recombination protein RecR [Rhodobacter sphaeroides WS8N] gi|123591212|sp|Q3IZZ6|RECR_RHOS4 RecName: Full=Recombination protein recR gi|166221958|sp|A3PMA3|RECR_RHOS1 RecName: Full=Recombination protein recR gi|254790780|sp|B9KLQ5|RECR_RHOSK RecName: Full=Recombination protein recR gi|77388703|gb|ABA79888.1| recombination protein RecR [Rhodobacter sphaeroides 2.4.1] gi|126104791|gb|ABN77469.1| recombination protein RecR [Rhodobacter sphaeroides ATCC 17029] gi|221160950|gb|ACM01930.1| Recombination protein recR [Rhodobacter sphaeroides KD131] gi|332276886|gb|EGJ22201.1| recombination protein RecR [Rhodobacter sphaeroides WS8N] Length = 199 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 103/199 (51%), Positives = 138/199 (69%), Gaps = 2/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +IE LI+++AR+PG GPRSARRA L ++KK+ ++ PLA+AMA + C Sbjct: 1 MAE--APGDIERLIELMARLPGLGPRSARRAVLLMLKKRGAVMAPLAQAMAEVATSARDC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+ D C IC D++R + VVEDVADLWALER+ A YHVLGG LS LD + Sbjct: 59 VRCGNITNADLCGICRDERRATGELCVVEDVADLWALERAGAFRGRYHVLGGVLSALDSV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE++ I L ER+ + I E+I A++AT++GQTTAHYI D L+ V++T LA G+P+G Sbjct: 119 GPEELRIPRLAERVREEGISEVILALNATVDGQTTAHYIADVLEPSGVQVTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGTI A+R+R Sbjct: 179 GELDYLDDGTIGAALRARR 197 >gi|227510685|ref|ZP_03940734.1| recombination protein RecR [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513701|ref|ZP_03943750.1| recombination protein RecR [Lactobacillus buchneri ATCC 11577] gi|227522509|ref|ZP_03952558.1| recombination protein RecR [Lactobacillus hilgardii ATCC 8290] gi|227083020|gb|EEI18332.1| recombination protein RecR [Lactobacillus buchneri ATCC 11577] gi|227090331|gb|EEI25643.1| recombination protein RecR [Lactobacillus hilgardii ATCC 8290] gi|227189806|gb|EEI69873.1| recombination protein RecR [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 199 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + V + + + A+ + CSICGN Sbjct: 3 YPEPIAKLIDSYMKLPGIGNKTATRLAFYTVDMNKDDVKEFSHALLATKEDLHYCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD + I+VVE D+ +E+ + + LYHVL G LSP++ GPED+ Sbjct: 63 LTDEDPCEICRDKTRDQTKILVVEQPKDIMVMEKVQEYHGLYHVLHGVLSPIEGKGPEDL 122 Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SLI R++ +++E+I A +AT EG+ TA Y+ +K +++TRLA+G+ +G++++ Sbjct: 123 NITSLIRRLQKNGEVKEVIVATNATPEGEATAMYLSKLIKPAGIRVTRLAHGLSVGTDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 183 YADEMTLFKAVQGRTEM 199 >gi|89073486|ref|ZP_01160009.1| recombination protein RecR [Photobacterium sp. SKA34] gi|90580019|ref|ZP_01235827.1| recombination protein RecR [Vibrio angustum S14] gi|89050750|gb|EAR56231.1| recombination protein RecR [Photobacterium sp. SKA34] gi|90438904|gb|EAS64087.1| recombination protein RecR [Vibrio angustum S14] Length = 199 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ Q LA+A++ ++ C C Sbjct: 3 TSHLLEHLMEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLADALSQAMTEIGHCRDCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R +I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEDDVCAICENPRRQENGLICVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R++ + I E+I A + T+EG+ TAHYI + DV +R+A+G+P+G EL+ Sbjct: 123 IGLDRLENRLQHENISEIILATNPTVEGEATAHYIAELCHEYDVPASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLAGRQRL 199 >gi|227542726|ref|ZP_03972775.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC 51866] gi|227181492|gb|EEI62464.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC 51866] Length = 207 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 10/207 (4%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI +R+PG GP+SA+R HL+ ++ + L A+ + V C IC Sbjct: 1 MFEGPFQELIDEFSRLPGIGPKSAQRIAFHLINAEDDSVERLISALTGVVGGVSFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + + C IC + +RDA+ I VVE+ D+ +ER+ YHVLGG+L PL IGP++ Sbjct: 61 NISSDEVCTICANPERDATTICVVEEPKDIQVIERTGEYTGRYHVLGGALDPLGGIGPKE 120 Query: 125 IGIQSLIERI---------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLA 174 + I L+ R+ +V I E+I A EG+ TA Y+ LK + ++RLA Sbjct: 121 LNITQLVRRVGGTLPDVSSDVPDIAEVILATDPNTEGEATASYLARLLKDFSGLTVSRLA 180 Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201 G+P+G +L+++D+ T+ A+ R + Sbjct: 181 SGMPLGGDLEFVDELTLSRALSGRLKI 207 >gi|111021188|ref|YP_704160.1| recombination protein RecR [Rhodococcus jostii RHA1] gi|226363548|ref|YP_002781330.1| recombination protein RecR [Rhodococcus opacus B4] gi|123340193|sp|Q0S8Y4|RECR_RHOSR RecName: Full=Recombination protein recR gi|110820718|gb|ABG96002.1| recombination protein [Rhodococcus jostii RHA1] gi|226242037|dbj|BAH52385.1| recombination protein RecR [Rhodococcus opacus B4] Length = 202 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG Sbjct: 1 MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRVRDGVQFCVVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 TVSDKEHCRICADPRRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ RI ++ E+I A EG+ TA Y++ L+ + ++RLA G+PM Sbjct: 121 LRIRELLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADELTLGRALSGRRTL 202 >gi|54022259|ref|YP_116501.1| recombination protein RecR [Nocardia farcinica IFM 10152] gi|73621501|sp|Q5Z354|RECR_NOCFA RecName: Full=Recombination protein recR gi|54013767|dbj|BAD55137.1| putative recombination and repair protein [Nocardia farcinica IFM 10152] Length = 202 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL++ + + L A+ + + V C +CG Sbjct: 1 MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLQVEPPEIDRLQAALQKVRDGVQFCVVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V + C IC D +RD ++I VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 TVSDGELCRICADPRRDRTMICVVEEPKDVQAIERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ RI + E+I A EG+ TA Y++ L+ + +TRLA G+PM Sbjct: 121 LRIRELLARIGNQDDGVDVAEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADELTLGRALSGRRAL 202 >gi|320536108|ref|ZP_08036161.1| recombination protein RecR [Treponema phagedenis F0421] gi|320147025|gb|EFW38588.1| recombination protein RecR [Treponema phagedenis F0421] Length = 197 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 114/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +++LI +R+PG G +SA R HL+K+ LA+++ ++ K+ CS+CG Sbjct: 3 ALDDLIDNFSRLPGIGKKSAMRLAYHLLKRSPTEAQALAKSILMLHEKIHPCSVCGAFTD 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC D RD S I VVE D+ + N L+HVLGG ++PL+ +GP+ + I Sbjct: 63 QDLCLICADPLRDTSTICVVEQPQDVETVAAVAEYNGLFHVLGGVIAPLEGVGPDQLRIG 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI+RI+ I+E+I A + TIEG TTA Y+ L+ + ++RLA G+P+G +L+Y D Sbjct: 123 ELIKRIQQGNIKEIILATNPTIEGDTTALYLQKILQDFSLTVSRLASGLPVGGDLEYTDR 182 Query: 189 GTIFEAIRSRTVL 201 T+ + R R L Sbjct: 183 LTLARSFRGRINL 195 >gi|303258601|ref|ZP_07344581.1| recombination protein RecR [Streptococcus pneumoniae SP-BS293] gi|303262688|ref|ZP_07348628.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS292] gi|303263628|ref|ZP_07349550.1| recombination protein RecR [Streptococcus pneumoniae BS397] gi|303266389|ref|ZP_07352278.1| recombination protein RecR [Streptococcus pneumoniae BS457] gi|303268262|ref|ZP_07354060.1| recombination protein RecR [Streptococcus pneumoniae BS458] gi|302636244|gb|EFL66739.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS292] gi|302640102|gb|EFL70557.1| recombination protein RecR [Streptococcus pneumoniae SP-BS293] gi|302642213|gb|EFL72562.1| recombination protein RecR [Streptococcus pneumoniae BS458] gi|302644089|gb|EFL74347.1| recombination protein RecR [Streptococcus pneumoniae BS457] gi|302646666|gb|EFL76891.1| recombination protein RecR [Streptococcus pneumoniae BS397] Length = 198 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDSTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|331681867|ref|ZP_08382500.1| recombination protein RecR [Escherichia coli H299] gi|331081069|gb|EGI52234.1| recombination protein RecR [Escherichia coli H299] Length = 201 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEHEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|110640733|ref|YP_668461.1| recombination protein RecR [Escherichia coli 536] gi|123344293|sp|Q0TKG9|RECR_ECOL5 RecName: Full=Recombination protein recR gi|110342325|gb|ABG68562.1| recombination protein RecR [Escherichia coli 536] Length = 201 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+ + +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQTLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRKENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|163801916|ref|ZP_02195813.1| recombination protein RecR [Vibrio sp. AND4] gi|159174424|gb|EDP59228.1| recombination protein RecR [Vibrio sp. AND4] Length = 199 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQDNGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRHKI 199 >gi|194364637|ref|YP_002027247.1| recombination protein RecR [Stenotrophomonas maltophilia R551-3] gi|194347441|gb|ACF50564.1| recombination protein RecR [Stenotrophomonas maltophilia R551-3] Length = 199 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 118/196 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI L +PG G ++A+R HL++++ + LAEA++ ++ C+ C Sbjct: 1 MSAPLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAEALSLAVERIGHCAQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T+ C C + R+ S + VVE AD A+E + +Y VL G LSPLD IGP + Sbjct: 61 DFSETELCPTCANSSRERSQLCVVESPADRLAIENATGFRGVYFVLQGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G++ L R+ +++ELI A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+ Sbjct: 121 LGLEQLERRLAEGEVQELIIATSATVEGEATAHYLAQLARARKVQPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ A +R+ Sbjct: 181 YVDRGTLSHAFGTRSE 196 >gi|154492908|ref|ZP_02032534.1| hypothetical protein PARMER_02547 [Parabacteroides merdae ATCC 43184] gi|154087213|gb|EDN86258.1| hypothetical protein PARMER_02547 [Parabacteroides merdae ATCC 43184] Length = 207 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 123/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +K +EN + L+ +PG G ++A R LH++++ A A+ + V C Sbjct: 1 MNQKYPSVLLENAVNELSSLPGVGRKTALRLALHMLRRDVGYTEGFASALLALRRDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ D CAIC+D QRD S + VVE++ ++ A+E + +YHVLGG +SP+D I Sbjct: 61 KVCHNICDDDVCAICVDCQRDHSTVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL++R+ +++E++ A+S T+EG TT +I KL DVKI+ +A G+ +G Sbjct: 121 GPGDLQIDSLVQRVAGGEVKEVVLALSTTMEGDTTNFFIYRKLSSYDVKISVIARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSIVNRTS 200 >gi|323191138|gb|EFZ76402.1| recombination protein RecR [Escherichia coli RN587/1] Length = 201 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 ASPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|156975354|ref|YP_001446261.1| recombination protein RecR [Vibrio harveyi ATCC BAA-1116] gi|171769809|sp|A7MUE4|RECR_VIBHB RecName: Full=Recombination protein recR gi|156526948|gb|ABU72034.1| hypothetical protein VIBHAR_03085 [Vibrio harveyi ATCC BAA-1116] Length = 194 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 1/193 (0%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 2 LEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRTFTEE 61 Query: 70 DPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ Sbjct: 62 EVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLD 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+ +D Sbjct: 122 VLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELELVDG 181 Query: 189 GTIFEAIRSRTVL 201 T+ ++ R + Sbjct: 182 TTLSHSLLGRHKI 194 >gi|157369380|ref|YP_001477369.1| recombination protein RecR [Serratia proteamaculans 568] gi|166918742|sp|A8GAV1|RECR_SERP5 RecName: Full=Recombination protein recR gi|157321144|gb|ABV40241.1| recombination protein RecR [Serratia proteamaculans 568] Length = 201 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + + E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEKESVTEVILATNPTVEGDATANYIAEMCGQYGVVASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R V+ Sbjct: 183 MVDGTTLSHSLAGRHVI 199 >gi|325917359|ref|ZP_08179574.1| DNA replication and repair protein RecR [Xanthomonas vesicatoria ATCC 35937] gi|325536400|gb|EGD08181.1| DNA replication and repair protein RecR [Xanthomonas vesicatoria ATCC 35937] Length = 197 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 113/194 (58%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++ LI+ +PG G +SA+R H+++++ + LA A+AN KV C+ C + Sbjct: 2 SSLLDQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATALANAVEKVGHCAQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 C IC + RD + VVE AD A+E + +Y +L G LSPLD IGP ++G Sbjct: 62 TEAQICPICANVSRDRQQLCVVESPADRLAIEHATGYRGVYFILQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ +I E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDQLGERLAAGEITEMIIATNATVEGEATAHYLAQLARQHGVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|165975531|ref|YP_001651124.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307244876|ref|ZP_07526974.1| hypothetical protein appser1_890 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247052|ref|ZP_07529105.1| hypothetical protein appser2_500 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307253830|ref|ZP_07535683.1| hypothetical protein appser9_890 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258286|ref|ZP_07540028.1| hypothetical protein appser11_900 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|165875632|gb|ABY68680.1| recombination DNA repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306854198|gb|EFM86405.1| hypothetical protein appser1_890 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856421|gb|EFM88571.1| hypothetical protein appser2_500 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306863190|gb|EFM95131.1| hypothetical protein appser9_890 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867625|gb|EFM99471.1| hypothetical protein appser11_900 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 221 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENL++ L +PG GP+SA+R HL+++ L++A+ + C C Sbjct: 24 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 83 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +I Sbjct: 84 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 143 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ Sbjct: 144 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 203 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 204 VDGTTLSHSFAGRRDI 219 >gi|74316535|ref|YP_314275.1| recombination protein RecR [Thiobacillus denitrificans ATCC 25259] gi|123612290|sp|Q3SLE3|RECR_THIDA RecName: Full=Recombination protein recR gi|74056030|gb|AAZ96470.1| RecR protein [Thiobacillus denitrificans ATCC 25259] Length = 197 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 114/197 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +E+LI L +PG GP+SA R HL+++ + LA A+ + + C +C Sbjct: 1 MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N + C +C +RD + VVE AD +E +++ N LY VL G LSPLD IGP + Sbjct: 61 NFSEAEVCEVCASTRRDRRQLAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I + LI R + E+I A + T EG+ TAH I + LK +K++RLA G+P+G EL+ Sbjct: 121 IHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLKARGLKVSRLARGVPVGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D GT+ +A+R R L Sbjct: 181 YVDSGTLAQAVRDRRAL 197 >gi|191173682|ref|ZP_03035206.1| recombination protein RecR [Escherichia coli F11] gi|300997164|ref|ZP_07181660.1| recombination protein RecR [Escherichia coli MS 200-1] gi|190906040|gb|EDV65655.1| recombination protein RecR [Escherichia coli F11] gi|300304299|gb|EFJ58819.1| recombination protein RecR [Escherichia coli MS 200-1] gi|324010644|gb|EGB79863.1| recombination protein RecR [Escherichia coli MS 60-1] Length = 201 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRKENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|169627424|ref|YP_001701073.1| recombination protein RecR [Mycobacterium abscessus ATCC 19977] gi|169239391|emb|CAM60419.1| Recombination protein RecR [Mycobacterium abscessus] Length = 202 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L A+ + + V C +CG Sbjct: 1 MFEGPVQDLIDELGKLPGVGPKSAQRIAFHLLGVEAPDIDRLTAALTRVRDGVQFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSDKERCRICADPRRDIALVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ 120 Query: 125 IGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ RI ++ E+I A EG+ TA Y++ L+ + +TRLA G+PM Sbjct: 121 LRIRELLTRIGTEEDGVSISEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADELTLGRALSGRRPL 202 >gi|303251897|ref|ZP_07338068.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649327|gb|EFL79512.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 201 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENL++ L +PG GP+SA+R HL+++ L++A+ + C C Sbjct: 4 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +I Sbjct: 64 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ Sbjct: 124 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 184 VDGTTLSHSFAGRRDI 199 >gi|260887503|ref|ZP_05898766.1| recombination protein RecR [Selenomonas sputigena ATCC 35185] gi|330837883|ref|YP_004412463.1| recombination protein RecR [Selenomonas sputigena ATCC 35185] gi|260862790|gb|EEX77290.1| recombination protein RecR [Selenomonas sputigena ATCC 35185] gi|329745647|gb|AEB99003.1| recombination protein RecR [Selenomonas sputigena ATCC 35185] Length = 201 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 3/196 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ +PG G ++A R H++ LAEA+ K+ CS+C N+ Sbjct: 6 PLAKLIEHFRALPGIGSKTAVRLAYHVLDMDAAKARALAEAIVEAREKIGFCSVCCNLSD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPCAIC ++RD S I VVE D+ A+ER K LYHVL GSLSPL +GPE++ ++ Sbjct: 66 QDPCAICASEKRDRSKICVVEQPQDVAAVERMKDYKGLYHVLHGSLSPLSGVGPENLRVK 125 Query: 129 SLIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 L+ R+E + +++E+I A + T+EG+ TA Y+ LK +K+TR+A+G+P+G +L+Y Sbjct: 126 ELLHRLEGEAGAEVQEIIMATNPTVEGEATAMYLARLLKPAGLKVTRIAHGLPIGGDLEY 185 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ +R + Sbjct: 186 ADEVTLAKALENRKEI 201 >gi|254884038|ref|ZP_05256748.1| recombination protein recR [Bacteroides sp. 4_3_47FAA] gi|254836831|gb|EET17140.1| recombination protein recR [Bacteroides sp. 4_3_47FAA] Length = 206 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 129/199 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ ++ AM + ++V C Sbjct: 2 MNQQYPSMLLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYC 61 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D I Sbjct: 62 KVCHNISDTETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGI 121 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G Sbjct: 122 GPSDLQIESLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIG 181 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 182 DELEYTDEVTLGRSIINRT 200 >gi|227487305|ref|ZP_03917621.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC 51867] gi|227092731|gb|EEI28043.1| recombination protein RecR [Corynebacterium glucuronolyticum ATCC 51867] Length = 207 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 10/207 (4%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + LI +R+PG GP+SA+R HL+ ++ + L A+ + V C IC Sbjct: 1 MFEGPFQELIDEFSRLPGIGPKSAQRIAFHLINAEDDSVERLISALTGVVGGVSFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + + C IC + +RDA+ I VVE+ D+ +ER+ YHVLGG+L PL IGP++ Sbjct: 61 NISSDEVCTICANPERDATTICVVEEPKDIQVIERTGEYTGRYHVLGGALDPLGGIGPKE 120 Query: 125 IGIQSLIERI---------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLA 174 + I L+ R+ V I E+I A EG+ TA Y+ LK + ++RLA Sbjct: 121 LNITQLVRRVGGTLPDVSSGVPDIAEVILATDPNTEGEATASYLARLLKDFSGLTVSRLA 180 Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201 G+P+G +L+++D+ T+ A+ R + Sbjct: 181 SGMPLGGDLEFVDELTLSRALSGRLKI 207 >gi|213966435|ref|ZP_03394612.1| recombination protein RecR [Corynebacterium amycolatum SK46] gi|213950928|gb|EEB62333.1| recombination protein RecR [Corynebacterium amycolatum SK46] Length = 208 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 11/205 (5%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R +L+K + + +G L A+ + V C +CG Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFYLMKAEPEDIGRLQSALGRVREGVQFCRVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ TD C C D +RD ++ VVE+ D+ A+ER+ N YHVLGG+L PL IGP + Sbjct: 61 NISETDVCQYCSDTRRDRGLVCVVEEARDIQAIERTGEYNGRYHVLGGALDPLGGIGPNE 120 Query: 125 IGIQSLIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRL 173 + I++L++RI + +I E+I A EG+ TA Y+ L+ D+++TRL Sbjct: 121 LNIRTLLQRIAGVLDDVDETQPPEIHEVIIATDPNTEGEATATYLARLLRDFPDLEVTRL 180 Query: 174 AYGIPMGSELDYLDDGTIFEAIRSR 198 A G+P+G +L+++D+ T+ A+ R Sbjct: 181 ASGMPLGGDLEFVDELTLSRALTGR 205 >gi|15838408|ref|NP_299096.1| recombination protein RecR [Xylella fastidiosa 9a5c] gi|9106887|gb|AAF84616.1|AE004002_6 recombination protein [Xylella fastidiosa 9a5c] Length = 244 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C Sbjct: 47 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECR 106 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP + Sbjct: 107 DFSETKICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 166 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+ Sbjct: 167 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 226 Query: 185 YLDDGTIFEAIRSRTV 200 YLD GT+ A +RT Sbjct: 227 YLDRGTLSHAFGTRTE 242 >gi|6634573|emb|CAB64470.1| recombination protein [Streptococcus pneumoniae] Length = 198 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPSRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEATLLRAIENRTEL 198 >gi|149371245|ref|ZP_01890731.1| recombination protein recR [unidentified eubacterium SCB49] gi|149355383|gb|EDM43942.1| recombination protein recR [unidentified eubacterium SCB49] Length = 206 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 119/196 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++++PG G R+A R LHL+K+ + L+E++ + + CS Sbjct: 1 MDFSSKLLENAVNEMSQLPGIGKRTALRLVLHLLKQPKTQAIALSESIKELREDINFCSN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + R +++ VVED+ D+ A+E + YHVLGG +SP+D IGP Sbjct: 61 CHNISDVKVCEICSNPNRTKNIVCVVEDIRDVMAIENTSQYRGHYHVLGGKISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ IQSL++++ + ELIFA+S+T+EG TT YI +L+ + IT +A GI +G E Sbjct: 121 SELTIQSLVDKVREGVVDELIFALSSTLEGDTTNFYIFKQLEKYPITITTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYADEVTLGRSILHR 196 >gi|170017865|ref|YP_001728784.1| recombination protein RecR [Leuconostoc citreum KM20] gi|238688935|sp|B1MVT6|RECR_LEUCK RecName: Full=Recombination protein recR gi|169804722|gb|ACA83340.1| Recombination protein RecR [Leuconostoc citreum KM20] Length = 201 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 119/199 (59%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R + + +E + ++++ + + C ICGN Sbjct: 3 YPEPIAKLINSYTKLPGIGPKTATRLAFYTLGMQEDDVVDFSKSLLSAKKDLTFCRICGN 62 Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + +PCAIC D+ RD S + VVE+ D+ A+E ++ LYHVL G +SP GPE Sbjct: 63 ITENSVNPCAICQDKSRDQSTVFVVENSRDVMAMENTRDYYGLYHVLNGVISPSAGTGPE 122 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ + ++I E+I +A EG+ TA Y+ LK +K+TRLA+G+ +GS+ Sbjct: 123 DINLPSLIRRLSDHQEINEVIVGTNANAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D T+ +A++ RT L Sbjct: 183 IDYADQLTLIKAVQGRTEL 201 >gi|269138378|ref|YP_003295078.1| recombination protein [Edwardsiella tarda EIB202] gi|267984038|gb|ACY83867.1| recombination protein [Edwardsiella tarda EIB202] gi|304558408|gb|ADM41072.1| Recombination protein RecR [Edwardsiella tarda FL6-60] Length = 201 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRT 62 Query: 66 VDTTDPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + ++R+ I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEARLGQETLSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRHP 198 >gi|160872916|ref|ZP_02063048.1| recombination protein RecR [Rickettsiella grylli] gi|159121715|gb|EDP47053.1| recombination protein RecR [Rickettsiella grylli] Length = 198 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 118/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG GP+SA+R HL++K LA+ + ++ C C N Sbjct: 3 FSPLISQLISQFCCLPGVGPKSAQRMVFHLLEKARGDALTLAKMITQTVQEIGNCEHCRN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T CA+C + R+ ++ VVE D+ A+E++ + Y VL G LSPLD IGP+++ Sbjct: 63 LSETPICALCSNPNRERRLLCVVETPVDVLAIEQTGSYRGYYFVLMGRLSPLDGIGPKEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI I+RI + +E+I A + T+EG+ TAHY+ + +K +K++R+A+G+P+GSEL++ Sbjct: 123 GIHYFIQRINTQLPQEIILATNPTVEGEATAHYLTELIKQKGIKLSRIAHGVPLGSELEF 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ ++ SR + Sbjct: 183 IDNHTLARSLTSRVTI 198 >gi|332305804|ref|YP_004433655.1| recombination protein RecR [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173133|gb|AEE22387.1| recombination protein RecR [Glaciecola agarilytica 4H-3-7+YE-5] Length = 200 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 I LI +PG GP+SA+R HL+++ L++ + N V C C Sbjct: 4 SPLILELINAFKVLPGVGPKSAQRMAFHLLERNRSGALQLSQVLHNAMEHVGHCKQCRTF 63 Query: 67 DTTDPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 ++ C IC R + +VE D+ A+E++ LY VL G LSP+D IGP +I Sbjct: 64 TESELCEICAHPTRSEAGTLCIVESPQDVVAIEQTAEFKGLYFVLMGHLSPIDGIGPSEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L ++ K + E+I A + T+EG+ TAHYI D++ TRLA+G+P+G EL+Y Sbjct: 124 GLDELANLLDNKALNEVILATNPTVEGEATAHYIGQMCSARDIQATRLAHGMPVGGELEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A R L Sbjct: 184 VDGNTLTHAFVGRRSL 199 >gi|262279000|ref|ZP_06056785.1| recombination protein RecR [Acinetobacter calcoaceticus RUH2202] gi|262259351|gb|EEY78084.1| recombination protein RecR [Acinetobacter calcoaceticus RUH2202] Length = 198 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC +R+ ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTENEICDICASTEREDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ LI+R+ I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+ Sbjct: 121 IGVPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|237808960|ref|YP_002893400.1| recombination protein RecR [Tolumonas auensis DSM 9187] gi|259563707|sp|C4L8U4|RECR_TOLAT RecName: Full=Recombination protein recR gi|237501221|gb|ACQ93814.1| recombination protein RecR [Tolumonas auensis DSM 9187] Length = 200 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L++++ + L + + ++ C C Sbjct: 3 FSPLLDALIRELQVLPGVGPKSAQRMAFQLLERERKRGMQLGQTLQRALTEIGHCQHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC + +R S + +VE AD+ A+E++ + Y VL G LSPLD IGP++ Sbjct: 63 FTENSLCDICANPKRAESGQLCIVETPADVAAIEQTHLYSGRYFVLMGHLSPLDGIGPKE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L ++ + +E+I A + TIEG TA YI K + ITR+A+G+P+G EL+ Sbjct: 123 LGLDQLDNVLQGGQWKEVILATNPTIEGDATAFYIASMAKRYQINITRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLSGRRPL 199 >gi|295692242|ref|YP_003600852.1| recombination protein recr [Lactobacillus crispatus ST1] gi|295030348|emb|CBL49827.1| Recombination protein recR [Lactobacillus crispatus ST1] Length = 199 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI ++PG G ++A R + + +Q + A+++ + + C ICGN Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPDQDVDDFAKSLVQVKKDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I Sbjct: 63 ITEKDVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKNDAVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTAL 199 >gi|186475718|ref|YP_001857188.1| recombination protein RecR [Burkholderia phymatum STM815] gi|229890134|sp|B2JG60|RECR_BURP8 RecName: Full=Recombination protein recR gi|184192177|gb|ACC70142.1| recombination protein RecR [Burkholderia phymatum STM815] Length = 198 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCSDTERDPTLLCVVETPADQIMLEQTMTWRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVKRATDGVVKEVVLATNFTNEGEATAHYLGQTLKSRGLSVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSI 198 >gi|304395536|ref|ZP_07377419.1| recombination protein RecR [Pantoea sp. aB] gi|304356830|gb|EFM21194.1| recombination protein RecR [Pantoea sp. aB] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPAD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQK 198 >gi|153833889|ref|ZP_01986556.1| recombination protein RecR [Vibrio harveyi HY01] gi|269962149|ref|ZP_06176503.1| recombination protein RecR [Vibrio harveyi 1DA3] gi|148869831|gb|EDL68805.1| recombination protein RecR [Vibrio harveyi HY01] gi|269833233|gb|EEZ87338.1| recombination protein RecR [Vibrio harveyi 1DA3] Length = 199 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + K V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCKEHQVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRHKI 199 >gi|189459398|ref|ZP_03008183.1| hypothetical protein BACCOP_00019 [Bacteroides coprocola DSM 17136] gi|189433855|gb|EDV02840.1| hypothetical protein BACCOP_00019 [Bacteroides coprocola DSM 17136] Length = 222 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 126/199 (63%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ Q + A+ + +V C Sbjct: 18 MSQQYPSVLLEKAVGEFAKLPGIGRKTAMRLVLHLLRQDLQTVEAFGNAVITLKREVKYC 77 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC + RDAS + VVE++ D+ A+E ++ LYHVLGG +SP+D + Sbjct: 78 RVCHNISDTDVCQICSNSSRDASTVCVVENIRDVMAVENTQQYKGLYHVLGGVISPMDGV 137 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ER++ +RE+I A+S+T+EG TT YI KL DVK+T +A GI +G Sbjct: 138 GPSDLQIESLVERVKSGTVREVILALSSTMEGDTTNFYIFRKLAPYDVKLTMIARGISIG 197 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y D+ T+ +I +RT Sbjct: 198 DELEYTDEVTLGRSIVNRT 216 >gi|317495189|ref|ZP_07953559.1| recombination protein RecR [Gemella moribillum M424] gi|316914611|gb|EFV36087.1| recombination protein RecR [Gemella moribillum M424] Length = 198 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 114/196 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K I +LI + +PG G ++A R H +K + + A+++ + K+ C IC Sbjct: 3 YPKPILDLIDSYSLLPGIGRKTAVRLAFHTLKMHDDDIKNFADSLQGLKEKLTNCEICHR 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T C IC D RD S I VV + DL A+E + LYHVL G +SP+D IGP DI Sbjct: 63 LSETHVCDICSDNSRDKSTICVVANDNDLVAMENMQQYRGLYHVLDGLISPMDGIGPMDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL ER + ++E+I A +++ EG+ TA +I LK D+K+TR+A GI GS+++Y Sbjct: 123 NIKSLFERAQDATVKEIILATNSSPEGEGTASFISRYLKNTDIKVTRIAQGISFGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ AI R L Sbjct: 183 VDEVTLSRAISGRIEL 198 >gi|240948279|ref|ZP_04752665.1| recombination protein RecR [Actinobacillus minor NM305] gi|257465542|ref|ZP_05629913.1| recombination protein RecR [Actinobacillus minor 202] gi|240297318|gb|EER47859.1| recombination protein RecR [Actinobacillus minor NM305] gi|257451202|gb|EEV25245.1| recombination protein RecR [Actinobacillus minor 202] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +ENL++ L +PG GP+SA+R HL+++ L++A+ + C C Sbjct: 3 SSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALNEAMTHIGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R S + VVE D+ A+E++ + Y VL G LSP+D +GP + Sbjct: 63 FTEEEECNICRNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPIDGVGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P+G L+ Sbjct: 123 IGLDLLQQRLENESFHEVILATNPTIEGDATANYIAEICRIYNVKATRIAHGVPVGGSLE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 TVDGTTLSHSFAGRRDI 199 >gi|209522076|ref|ZP_03270729.1| recombination protein RecR [Burkholderia sp. H160] gi|209497485|gb|EDZ97687.1| recombination protein RecR [Burkholderia sp. H160] Length = 198 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLRHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D++RD S++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDEERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLTVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|256852107|ref|ZP_05557494.1| recombination protein RecR [Lactobacillus jensenii 27-2-CHN] gi|260661323|ref|ZP_05862236.1| recombination protein RecR [Lactobacillus jensenii 115-3-CHN] gi|282934784|ref|ZP_06340022.1| recombination protein RecR [Lactobacillus jensenii 208-1] gi|297205018|ref|ZP_06922414.1| recombination protein RecR [Lactobacillus jensenii JV-V16] gi|256615519|gb|EEU20709.1| recombination protein RecR [Lactobacillus jensenii 27-2-CHN] gi|260547778|gb|EEX23755.1| recombination protein RecR [Lactobacillus jensenii 115-3-CHN] gi|281301147|gb|EFA93453.1| recombination protein RecR [Lactobacillus jensenii 208-1] gi|297149596|gb|EFH29893.1| recombination protein RecR [Lactobacillus jensenii JV-V16] Length = 199 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ ++PG G ++A R + + + A+++ ++ + CSICGN Sbjct: 3 YPLPIARLIESYMKLPGIGEKTATRLAFYTLDMPADDVEQFAQSLKDVKTLLHQCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D RD S ++VVE D+ A E + +YHVL G LSP++ IGPEDI Sbjct: 63 ITETDPCQICRDSNRDRSTVMVVEQPKDVMAFEEMGEYDGMYHVLHGVLSPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI LK +K+TRLA G+ +G++++ Sbjct: 123 NIKSLITRLQKDDDIKEIIIALNSTPEGESTAMYIAKLLKPAGLKVTRLASGLAVGTDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRIDL 199 >gi|146310613|ref|YP_001175687.1| recombination protein RecR [Enterobacter sp. 638] gi|166918740|sp|A4W7F6|RECR_ENT38 RecName: Full=Recombination protein recR gi|145317489|gb|ABP59636.1| DNA replication and repair protein RecR [Enterobacter sp. 638] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESETLTEVILATNPTVEGEATANYIGELCAQYGVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 MVDGTTLSHSLAGRHKL 199 >gi|291616584|ref|YP_003519326.1| RecR [Pantoea ananatis LMG 20103] gi|291151614|gb|ADD76198.1| RecR [Pantoea ananatis LMG 20103] gi|327393014|dbj|BAK10436.1| recombination protein RecR [Pantoea ananatis AJ13355] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPAD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + + E+I A + T+EG+ TA+YI + V +R+A+G+PMG EL+ Sbjct: 123 IGLDRLEQRLENETLHEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPMGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRQKI 199 >gi|254452325|ref|ZP_05065762.1| recombination protein RecR [Octadecabacter antarcticus 238] gi|198266731|gb|EDY91001.1| recombination protein RecR [Octadecabacter antarcticus 238] Length = 197 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 108/201 (53%), Positives = 140/201 (69%), Gaps = 4/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + K+I+ LI ++AR+PG GPRSARRA LHL+KK+ QLL PLAEA+ + C Sbjct: 1 MSQ--APKDIDALINLMARLPGLGPRSARRAVLHLIKKRGQLLNPLAEALTIVGATAREC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+ T+D C IC ++R+ I VVEDVADLWA+ERS YHVLGG+LS LD I Sbjct: 59 LNCGNIGTSDLCGICESEKRNVGQICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDDI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I L +RI + I E+I A+ ATI+GQTTAHYI D+L V++T LA G+P+G Sbjct: 119 GPDELRIPKLRDRITTEHITEVILALGATIDGQTTAHYIADEL--HGVQVTTLAQGVPVG 176 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGTI A+ +R L Sbjct: 177 GELDYLDDGTITAALNARKAL 197 >gi|329770460|ref|ZP_08261839.1| recombination protein recR [Gemella sanguinis M325] gi|328836315|gb|EGF85981.1| recombination protein recR [Gemella sanguinis M325] Length = 198 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 114/196 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K I +LI + +PG G ++A R H +K + + A+++ + K+ C +C Sbjct: 3 YPKPILDLIDSYSLLPGIGRKTAIRLAFHTLKMNDNDINNFAKSLVELKEKLTNCEVCHR 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T C IC D RD S I VV + DL A+E + +YHVL G +SP+D IGP DI Sbjct: 63 LSETSVCDICTDNSRDKSTICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL ER + ++E+I A +++ EG+ TA +I LK D+K+TR+A GI GS+++Y Sbjct: 123 NIKSLFERAQDPIVKEIILATNSSPEGEGTASFISKYLKNTDIKVTRIAQGISFGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ AI R + Sbjct: 183 VDEVTLSRAISGRIEI 198 >gi|239993308|ref|ZP_04713832.1| recombination protein RecR [Alteromonas macleodii ATCC 27126] Length = 199 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI+ L +PG G +SA+R HL+++ L+ + N + C C Sbjct: 3 FSPLLSELIQALTCLPGVGNKSAQRMAFHLLERNRTGAIDLSNVLHNAMEHIHHCKRCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC +R+AS ++ +VE D+ A+E++ + Y VL G LSP+D +GPE+ Sbjct: 63 FTEDELCDICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI +V +R+A+G+P+G EL+ Sbjct: 123 IGLTELEARLAAGGINEVILATNPTVEGEATAHYIAQLCASHNVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ A R L Sbjct: 183 YIDGNTLTHAFSGRRKL 199 >gi|227494435|ref|ZP_03924751.1| recombination protein [Actinomyces coleocanis DSM 15436] gi|226832169|gb|EEH64552.1| recombination protein [Actinomyces coleocanis DSM 15436] Length = 196 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 115/197 (58%), Gaps = 2/197 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L +PG GP+SA+R H++ + LA A+ + KV C CG Sbjct: 1 MYEGAVQDLIDELGALPGVGPKSAQRIAFHILSADSADVMRLANALRVVKEKVRFCENCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ C IC D +RD ++I VVE+ D+ +ER+ + LYHVLGG++ P+ +GPE Sbjct: 61 NIAEAPTCRICQDPRRDTTLICVVEEAKDVEVIERTGSYRGLYHVLGGAIDPIKGLGPEQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R+ +RE+I A IEG+ TA Y+ L+ + V +RLA G+P+G +L+ Sbjct: 121 LRIRQLLGRL--TNVREVIIATDPNIEGEATATYLARMLETMQVPASRLALGLPVGGDLE 178 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A R +L Sbjct: 179 YADEITLGRAFEGRRLL 195 >gi|259909220|ref|YP_002649576.1| Recombination protein [Erwinia pyrifoliae Ep1/96] gi|224964842|emb|CAX56364.1| Recombination protein [Erwinia pyrifoliae Ep1/96] gi|283479270|emb|CAY75186.1| Recombination protein recR [Erwinia pyrifoliae DSM 12163] gi|310766876|gb|ADP11826.1| Recombination protein [Erwinia sp. Ejp617] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + +I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDICTICANPRRQQNGLICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEKESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQK 198 >gi|300715627|ref|YP_003740430.1| Recombination protein RecR [Erwinia billingiae Eb661] gi|299061463|emb|CAX58577.1| Recombination protein RecR [Erwinia billingiae Eb661] Length = 201 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + +I +VE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQEICTICANPRRQQNGLICIVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPND 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEKESIQEVILATNPTVEGEATANYIAEMCGQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|188534597|ref|YP_001908394.1| Recombination protein [Erwinia tasmaniensis Et1/99] gi|229890149|sp|B2VCL6|RECR_ERWT9 RecName: Full=Recombination protein recR gi|188029639|emb|CAO97518.1| Recombination protein [Erwinia tasmaniensis Et1/99] Length = 201 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R +I VVE AD+ A+E++ + Y VL G LSPLD IGP D Sbjct: 63 FTEQEICTICANPRRQHNGLICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLETESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRQK 198 >gi|6634588|emb|CAB64482.1| recombination protein [Streptococcus pneumoniae] Length = 198 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKTLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|115351814|ref|YP_773653.1| recombination protein RecR [Burkholderia ambifaria AMMD] gi|170703765|ref|ZP_02894478.1| recombination protein RecR [Burkholderia ambifaria IOP40-10] gi|171322543|ref|ZP_02911332.1| recombination protein RecR [Burkholderia ambifaria MEX-5] gi|172060785|ref|YP_001808437.1| recombination protein RecR [Burkholderia ambifaria MC40-6] gi|122323080|sp|Q0BEV4|RECR_BURCM RecName: Full=Recombination protein recR gi|229890130|sp|B1YRE7|RECR_BURA4 RecName: Full=Recombination protein recR gi|115281802|gb|ABI87319.1| recombination protein RecR [Burkholderia ambifaria AMMD] gi|170131326|gb|EDS99940.1| recombination protein RecR [Burkholderia ambifaria IOP40-10] gi|171092124|gb|EDT37536.1| recombination protein RecR [Burkholderia ambifaria MEX-5] gi|171993302|gb|ACB64221.1| recombination protein RecR [Burkholderia ambifaria MC40-6] Length = 198 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|294787158|ref|ZP_06752411.1| recombination protein RecR [Parascardovia denticolens F0305] gi|315227305|ref|ZP_07869092.1| recombination protein R [Parascardovia denticolens DSM 10105] gi|294484514|gb|EFG32149.1| recombination protein RecR [Parascardovia denticolens F0305] gi|315119755|gb|EFT82888.1| recombination protein R [Parascardovia denticolens DSM 10105] Length = 203 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 126/194 (64%), Gaps = 3/194 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I+N+I A +PG GP+ A+R HL+ ++ LAE++ + KV C ICGNV Sbjct: 8 AIQNVIDRFASLPGIGPKGAQRIAFHLLSVSQEDAQALAESILTMKEKVRFCEICGNVCE 67 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + PC IC+D +RD ++I VV++ D+ +LER+ LYHVLGG++ P+ +GP+D+ I Sbjct: 68 SSPCPICLDPRRDRTIICVVQEPKDIMSLERTHEYRGLYHVLGGAIDPMADVGPQDLHIT 127 Query: 129 SLIERIEVK---KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 L+ R++ +I+E+IFA++ IEG+ T Y+ L+ +D+K+TRLA G+PMGS+L+Y Sbjct: 128 DLLNRLKTDEGKEIKEIIFALNPDIEGEATTTYLSRLLEPLDIKLTRLASGLPMGSDLEY 187 Query: 186 LDDGTIFEAIRSRT 199 D+ T+ A+ R Sbjct: 188 ADEITLGRALSGRQ 201 >gi|227549653|ref|ZP_03979702.1| recombination protein RecR [Corynebacterium lipophiloflavum DSM 44291] gi|227078277|gb|EEI16240.1| recombination protein RecR [Corynebacterium lipophiloflavum DSM 44291] Length = 208 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 11/208 (5%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R +L+K+ + L A+ + + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFYLLKQDPDDVDRLVGALNAVRDGVAFCRICS 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C IC D RDA ++ VVED D+ +ER+ YHVLGG+L PL +GP+D Sbjct: 61 NVSREEVCRICADSSRDAGLVCVVEDAKDIQVIERTGEFRGRYHVLGGALDPLANVGPKD 120 Query: 125 IGIQSLIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRL 173 + I SL++RI E + E+I A EG+ TA Y+ LK D+ ++RL Sbjct: 121 LSIASLLQRIGAVLPDVDDAEAPNVHEVIIATDPDTEGEATASYLARLLKDFPDLVVSRL 180 Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201 A G+P+G +L+++D+ T+ A+ R L Sbjct: 181 ASGMPLGGDLEFVDELTLSRALTGRLTL 208 >gi|62179097|ref|YP_215514.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|73621513|sp|Q57S78|RECR_SALCH RecName: Full=Recombination protein recR gi|62126730|gb|AAX64433.1| putative recombination protein, gap repair [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713558|gb|EFZ05129.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 201 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFPGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|27365347|ref|NP_760875.1| recombination protein RecR [Vibrio vulnificus CMCP6] gi|37680593|ref|NP_935202.1| recombination protein RecR [Vibrio vulnificus YJ016] gi|320155734|ref|YP_004188113.1| recombination protein RecR [Vibrio vulnificus MO6-24/O] gi|29611846|sp|Q8DB22|RECR_VIBVU RecName: Full=Recombination protein recR gi|56749650|sp|Q7MIV4|RECR_VIBVY RecName: Full=Recombination protein recR gi|27361494|gb|AAO10402.1| recombination protein RecR [Vibrio vulnificus CMCP6] gi|37199341|dbj|BAC95173.1| Recombinational DNA repair protein [Vibrio vulnificus YJ016] gi|319931046|gb|ADV85910.1| recombination protein RecR [Vibrio vulnificus MO6-24/O] Length = 200 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A+++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSHAMTEIGHCNECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R ++ VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEDVCHICNNPKRQENGLLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDIKEVILATNPTVEGEATAHYIAELCREHKVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRHKL 199 >gi|134295856|ref|YP_001119591.1| recombination protein RecR [Burkholderia vietnamiensis G4] gi|172044365|sp|A4JEQ3|RECR_BURVG RecName: Full=Recombination protein recR gi|134139013|gb|ABO54756.1| recombination protein RecR [Burkholderia vietnamiensis G4] Length = 198 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + +L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSSLVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|303235790|ref|ZP_07322397.1| recombination protein RecR [Prevotella disiens FB035-09AN] gi|302484237|gb|EFL47225.1| recombination protein RecR [Prevotella disiens FB035-09AN] Length = 202 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 133/200 (66%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ + +E + A++PG G ++A R LHL+++ ++ + E ++ + + + C Sbjct: 1 MQQFPSQLLEKAVGEFAKLPGVGRKTALRFVLHLLRESKEEVDVFTETISTMRHDIKYCH 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ TD CAIC + +RD+S I VVE+V D+ A+E ++ N LYHVLGG +SP+D IG Sbjct: 61 VCHNISDTDTCAICANSRRDSSTICVVENVQDVLAIENTQQFNGLYHVLGGIISPIDGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P ++ I+SL+ER++ I+E+I A+++T+EG TT YI KLK D+ I+ +A GI +G Sbjct: 121 PNNLEIESLVERVKSGGIKEVILALASTMEGDTTNFYISRKLKEYDITISIIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y D+ T+ +I +RT++ Sbjct: 181 ELEYTDEVTLGRSIANRTIM 200 >gi|156934944|ref|YP_001438860.1| recombination protein RecR [Cronobacter sakazakii ATCC BAA-894] gi|166221938|sp|A7MJW5|RECR_ENTS8 RecName: Full=Recombination protein recR gi|156533198|gb|ABU78024.1| hypothetical protein ESA_02794 [Cronobacter sakazakii ATCC BAA-894] Length = 201 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEKCNICTNPRRQENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAAEPLKEIILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKM 199 >gi|299770308|ref|YP_003732334.1| recombination protein RecR [Acinetobacter sp. DR1] gi|298700396|gb|ADI90961.1| recombination protein RecR [Acinetobacter sp. DR1] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC +R+ ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTEHEICDICASTEREDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI LI+R+ KI E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+ Sbjct: 121 IGIPYLIQRLSQGKIEEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|294635359|ref|ZP_06713853.1| recombination protein RecR [Edwardsiella tarda ATCC 23685] gi|291091246|gb|EFE23807.1| recombination protein RecR [Edwardsiella tarda ATCC 23685] Length = 201 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRT 62 Query: 66 VDTTDPCAICID-QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + ++R+ I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEICTICANARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + + E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLGQETLNEVILATNPTVEGEATANYIAEMCAAHGVMASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRHP 198 >gi|313203551|ref|YP_004042208.1| DNA replication and repair protein recr [Paludibacter propionicigenes WB4] gi|312442867|gb|ADQ79223.1| DNA replication and repair protein RecR [Paludibacter propionicigenes WB4] Length = 207 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 129/201 (64%), Gaps = 1/201 (0%) Query: 1 MQ-KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M ++ + +EN + A++PG G ++A R LHL+K+ E + +A + +++ Sbjct: 1 MSLQQFSSSLLENAVNEFAKLPGIGRKTALRLVLHLLKQSEYEVEVFGKAFIQLRSEIQY 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C++C N+ T+ C IC + RD + VVE++ D+ ++E ++ LYHVLGG +SP+D Sbjct: 61 CTVCHNISDTEICQICSNPSRDHETVCVVENIKDVMSIENTQQFRGLYHVLGGIISPMDG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GP+D+ I+SLIER++ + ++E+I A+S T+EG TT YI KL +++KIT +A GI + Sbjct: 121 VGPKDLEIESLIERVQTENVKEVILALSTTMEGDTTNFYIFRKLAPLNIKITTIARGIAI 180 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 G EL+Y D+ T+ +I +R Sbjct: 181 GDELEYADEVTLGRSILNRVE 201 >gi|325003633|ref|ZP_08124745.1| recombination protein RecR [Pseudonocardia sp. P1] Length = 205 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 8/205 (3%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + L E + + V C +CG Sbjct: 1 MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQEVLQTVKQGVAFCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C C D +RD +++ VVE+ D+ A+ER++ YHVLGG+L PL +GP+ Sbjct: 61 NVSSDTRCRYCSDARRDPALLCVVEEPKDVLAVERTREFKGRYHVLGGALDPLAGVGPDT 120 Query: 125 IGIQSLIERI-------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYG 176 + I+ L+ R+ + I E+I A EG+ TA Y++ L+ + +TRLA G Sbjct: 121 LRIRELLARLGGTGPAQDETSISEVIIATDPNTEGEATATYLVRLLRDFPGLTVTRLASG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 +PMG +L++ D+ T+ A+ R L Sbjct: 181 LPMGGDLEFADEMTLGRALAGRRAL 205 >gi|117920887|ref|YP_870079.1| recombination protein RecR [Shewanella sp. ANA-3] gi|166221966|sp|A0KY04|RECR_SHESA RecName: Full=Recombination protein recR gi|117613219|gb|ABK48673.1| DNA replication and repair protein RecR [Shewanella sp. ANA-3] Length = 199 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDIGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+ Sbjct: 63 YTEESLCPICSSHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVVISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRIPL 199 >gi|307729578|ref|YP_003906802.1| recombination protein RecR [Burkholderia sp. CCGE1003] gi|307584113|gb|ADN57511.1| recombination protein RecR [Burkholderia sp. CCGE1003] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ L A+ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQVCEVCLDPERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLTVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|323526147|ref|YP_004228300.1| recombination protein RecR [Burkholderia sp. CCGE1001] gi|323383149|gb|ADX55240.1| recombination protein RecR [Burkholderia sp. CCGE1001] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L A+ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGADKLGRALLFATEHLRHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D +RD S++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDPERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|282880427|ref|ZP_06289135.1| recombination protein RecR [Prevotella timonensis CRIS 5C-B1] gi|281305698|gb|EFA97750.1| recombination protein RecR [Prevotella timonensis CRIS 5C-B1] Length = 203 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 128/198 (64%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+++ +E + A++PG G ++A R L+++++ + + A+A++ + + V C Sbjct: 1 MEQQYPSLLLEKAVSEFAKLPGIGRKTALRLVLNMLRRNVEEVEQFAQAISTMRHDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ TD C IC D +RDAS I VVE++ D+ A+E + LYHVLGG +SP+D I Sbjct: 61 RQCHNISDTDICPICADPRRDASTICVVENIQDVMAIENTMQYRGLYHVLGGLISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + IQSLI+R+E I E+I A+++T+EG TT YI KL +VK+T +A GIP+G Sbjct: 121 GPDQLEIQSLIDRVEAGGISEVILALNSTMEGDTTNFYISRKLNSSEVKLTVIARGIPIG 180 Query: 181 SELDYLDDGTIFEAIRSR 198 EL+Y D+ T+ +I +R Sbjct: 181 DELEYTDEVTLGRSILNR 198 >gi|241889846|ref|ZP_04777144.1| recombination protein RecR [Gemella haemolysans ATCC 10379] gi|241863468|gb|EER67852.1| recombination protein RecR [Gemella haemolysans ATCC 10379] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 118/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K I +LI+ + +PG G ++A R H +K + + A+++ N+ +K+ C +CG Sbjct: 3 YPKPILDLIESYSLLPGIGKKTAVRLAFHTLKMNDTDIKNFADSLVNLKDKLTNCEVCGR 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC D RD S I VV + DL A+E + +YHVL G +SP+D IGP DI Sbjct: 63 LSEEHVCDICSDPGRDKSTICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+S+ ER + + ++E+I A +++ EG+ TA +I LK D+++TR+A GI GS+++Y Sbjct: 123 NIKSIFERAQDETVKEIILATNSSPEGEGTASFISRYLKNTDIRVTRIAQGISFGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ AI R L Sbjct: 183 VDEVTLSRAISGRIEL 198 >gi|219871233|ref|YP_002475608.1| recombination protein RecR [Haemophilus parasuis SH0165] gi|254790770|sp|B8F5Q8|RECR_HAEPS RecName: Full=Recombination protein recR gi|219691437|gb|ACL32660.1| recombination protein RecR [Haemophilus parasuis SH0165] Length = 201 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +ENL++ L +PG GP+SA+R HL+++ LA+A++ + C C Sbjct: 3 SSPLLENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + + VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDECAICQNYRRQISGQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + +E+I A + TIEG TA+YI + ++K+TR+A+GIP+GSEL+ Sbjct: 123 IGLDLLQKRLEEESFQEVILATNPTIEGDATANYIAEMCSIHNIKVTRIAHGIPVGSELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D ++ + R + Sbjct: 183 MVDGTSLSHSFVGRRDI 199 >gi|114767708|ref|ZP_01446397.1| recombination protein RecR [Pelagibaca bermudensis HTCC2601] gi|114540291|gb|EAU43391.1| recombination protein RecR [Roseovarius sp. HTCC2601] Length = 197 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 102/191 (53%), Positives = 137/191 (71%), Gaps = 1/191 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 EI+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+AM + + C CGNV T Sbjct: 6 EIDALIDLMAKLPGLGPRSARRAVLHLIRKRALLLQPLADAMQQVASSARECLNCGNVGT 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC D +R I VVEDV+DLWA+ERS YHVLGG+LS LD +GPE++ I Sbjct: 66 AEICPICADARRANGQICVVEDVSDLWAMERSGVFKGRYHVLGGTLSALDNVGPEELRIP 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ RI+ + I E+I A++AT++GQTTAHYI D+L+ V++T LA G+P+G ELDYLDD Sbjct: 126 QLVSRIDGEAISEVILALNATVDGQTTAHYIADQLETR-VELTSLAQGVPIGGELDYLDD 184 Query: 189 GTIFEAIRSRT 199 GTI A+ +R Sbjct: 185 GTITAALNARK 195 >gi|326336172|ref|ZP_08202344.1| recombination protein R [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691681|gb|EGD33648.1| recombination protein R [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 202 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 124/196 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++++PG G R+A R LHL+K+ + LA ++ N++ C Sbjct: 1 MNFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPNGQVEQLANSLVRFRNEITYCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC RD SVI VVEDV D+ A+E + N LYHVLGG +SP+D IGP Sbjct: 61 CHNISDTEICEICASFNRDPSVICVVEDVRDVMAIENTGQYNGLYHVLGGRISPIDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SL+++ + ++E+IFA+S T+EG TT YI +L+G+D+ I+ +A GI +G E Sbjct: 121 NELHIASLVKKAKEGTVKEIIFALSNTMEGDTTNFYIFKQLEGLDITISTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYTDEVTLGRSILHR 196 >gi|325522012|gb|EGD00696.1| recombination protein RecR [Burkholderia sp. TJI49] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQTCEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|260426216|ref|ZP_05780195.1| recombination protein RecR [Citreicella sp. SE45] gi|260420708|gb|EEX13959.1| recombination protein RecR [Citreicella sp. SE45] Length = 197 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 103/193 (53%), Positives = 138/193 (71%), Gaps = 1/193 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 EI+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+AM + C CGNV T Sbjct: 6 EIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLQPLADAMGAVATSARECLNCGNVGT 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC D++R + VVEDVADLWA+ERS YHVLGG+LS LD +GPE++ I Sbjct: 66 AEICPICADERRGNGQLCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDSVGPEELRIP 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+E + I E+I A++AT++GQTTAHYI D+L+ V++T LA G+P+G ELDYLDD Sbjct: 126 QLVHRVETEAITEVILALNATVDGQTTAHYIADQLETR-VELTSLAQGVPIGGELDYLDD 184 Query: 189 GTIFEAIRSRTVL 201 GTI A+ +R + Sbjct: 185 GTITAALNARKRI 197 >gi|254437816|ref|ZP_05051310.1| recombination protein RecR [Octadecabacter antarcticus 307] gi|198253262|gb|EDY77576.1| recombination protein RecR [Octadecabacter antarcticus 307] Length = 197 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 106/196 (54%), Positives = 138/196 (70%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K+I+ LI ++AR+PG GPRSARRA LHL+KK+ QLL PLAEA+ + C CGN Sbjct: 4 APKDIDALIDLMARLPGLGPRSARRAVLHLIKKRGQLLNPLAEALTIVGATARECLNCGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T++ C IC ++R+ I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ Sbjct: 64 IGTSEICGICKSEKRNVGQICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDDIGPDEL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L +RI + I E+I A+ ATI+GQTTAHYI D+L V++T LA G+P+G ELDY Sbjct: 124 RIPKLRDRITTEHITEVILALGATIDGQTTAHYIADEL--HGVQVTTLAQGVPVGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+ +R L Sbjct: 182 LDDGTITAALNARKAL 197 >gi|161524621|ref|YP_001579633.1| recombination protein RecR [Burkholderia multivorans ATCC 17616] gi|189350623|ref|YP_001946251.1| recombination protein RecR [Burkholderia multivorans ATCC 17616] gi|221212756|ref|ZP_03585732.1| recombination protein RecR [Burkholderia multivorans CGD1] gi|229890133|sp|A9AGY1|RECR_BURM1 RecName: Full=Recombination protein recR gi|160342050|gb|ABX15136.1| recombination protein RecR [Burkholderia multivorans ATCC 17616] gi|189334645|dbj|BAG43715.1| recombination protein [Burkholderia multivorans ATCC 17616] gi|221166969|gb|EED99439.1| recombination protein RecR [Burkholderia multivorans CGD1] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 DKCNTFTEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|15901507|ref|NP_346111.1| recombination protein RecR [Streptococcus pneumoniae TIGR4] gi|15903559|ref|NP_359109.1| recombination protein RecR [Streptococcus pneumoniae R6] gi|111658548|ref|ZP_01409211.1| hypothetical protein SpneT_02000304 [Streptococcus pneumoniae TIGR4] gi|116516007|ref|YP_816941.1| recombination protein RecR [Streptococcus pneumoniae D39] gi|148984110|ref|ZP_01817405.1| recombination protein RecR [Streptococcus pneumoniae SP3-BS71] gi|148988719|ref|ZP_01820152.1| recombination protein RecR [Streptococcus pneumoniae SP6-BS73] gi|148993756|ref|ZP_01823183.1| recombination protein RecR [Streptococcus pneumoniae SP9-BS68] gi|149001956|ref|ZP_01826910.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS69] gi|149006742|ref|ZP_01830428.1| recombination protein RecR [Streptococcus pneumoniae SP18-BS74] gi|149011466|ref|ZP_01832713.1| recombination protein RecR [Streptococcus pneumoniae SP19-BS75] gi|149021234|ref|ZP_01835480.1| recombination protein RecR [Streptococcus pneumoniae SP23-BS72] gi|168486960|ref|ZP_02711468.1| recombination protein RecR [Streptococcus pneumoniae CDC1087-00] gi|168491446|ref|ZP_02715589.1| recombination protein RecR [Streptococcus pneumoniae CDC0288-04] gi|168575139|ref|ZP_02721102.1| recombination protein RecR [Streptococcus pneumoniae MLV-016] gi|182684614|ref|YP_001836361.1| recombination protein RecR [Streptococcus pneumoniae CGSP14] gi|194398154|ref|YP_002038286.1| recombination protein RecR [Streptococcus pneumoniae G54] gi|225857288|ref|YP_002738799.1| recombination protein RecR [Streptococcus pneumoniae P1031] gi|225861500|ref|YP_002743009.1| recombination protein RecR [Streptococcus pneumoniae Taiwan19F-14] gi|237650678|ref|ZP_04524930.1| recombination protein RecR [Streptococcus pneumoniae CCRI 1974] gi|237822436|ref|ZP_04598281.1| recombination protein RecR [Streptococcus pneumoniae CCRI 1974M2] gi|307068297|ref|YP_003877263.1| recombinational DNA repair ATPase [Streptococcus pneumoniae AP200] gi|61230232|sp|P0A454|RECR_STRR6 RecName: Full=Recombination protein recR gi|122278213|sp|Q04J97|RECR_STRP2 RecName: Full=Recombination protein recR gi|226726311|sp|B5E722|RECR_STRP4 RecName: Full=Recombination protein recR gi|238691182|sp|B2IRS7|RECR_STRPS RecName: Full=Recombination protein recR gi|254790789|sp|C1CM11|RECR_STRZP RecName: Full=Recombination protein recR gi|254790790|sp|C1CST7|RECR_STRZT RecName: Full=Recombination protein recR gi|269969522|sp|P0CB76|RECR_STRPN RecName: Full=Recombination protein recR gi|4009464|gb|AAC95434.1| RecM [Streptococcus pneumoniae G54] gi|6634578|emb|CAB64474.1| recombination protein [Streptococcus pneumoniae] gi|6634583|emb|CAB64478.1| recombination protein [Streptococcus pneumoniae] gi|14973164|gb|AAK75751.1| recombination protein RecR [Streptococcus pneumoniae TIGR4] gi|15459178|gb|AAL00320.1| Recombination protein RecR [Streptococcus pneumoniae R6] gi|116076583|gb|ABJ54303.1| recombination protein RecR [Streptococcus pneumoniae D39] gi|147759765|gb|EDK66755.1| recombination protein RecR [Streptococcus pneumoniae SP14-BS69] gi|147761657|gb|EDK68621.1| recombination protein RecR [Streptococcus pneumoniae SP18-BS74] gi|147764456|gb|EDK71387.1| recombination protein RecR [Streptococcus pneumoniae SP19-BS75] gi|147923399|gb|EDK74512.1| recombination protein RecR [Streptococcus pneumoniae SP3-BS71] gi|147925920|gb|EDK76995.1| recombination protein RecR [Streptococcus pneumoniae SP6-BS73] gi|147927712|gb|EDK78736.1| recombination protein RecR [Streptococcus pneumoniae SP9-BS68] gi|147930335|gb|EDK81319.1| recombination protein RecR [Streptococcus pneumoniae SP23-BS72] gi|182629948|gb|ACB90896.1| recombination protein RecR [Streptococcus pneumoniae CGSP14] gi|183570091|gb|EDT90619.1| recombination protein RecR [Streptococcus pneumoniae CDC1087-00] gi|183574138|gb|EDT94666.1| recombination protein RecR [Streptococcus pneumoniae CDC0288-04] gi|183578849|gb|EDT99377.1| recombination protein RecR [Streptococcus pneumoniae MLV-016] gi|194357821|gb|ACF56269.1| recombination protein RecR [Streptococcus pneumoniae G54] gi|225725521|gb|ACO21373.1| recombination protein RecR [Streptococcus pneumoniae P1031] gi|225727686|gb|ACO23537.1| recombination protein RecR [Streptococcus pneumoniae Taiwan19F-14] gi|301800483|emb|CBW33122.1| recombination protein RecR [Streptococcus pneumoniae OXC141] gi|301802374|emb|CBW35128.1| recombination protein RecR [Streptococcus pneumoniae INV200] gi|306409834|gb|ADM85261.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus pneumoniae AP200] gi|332074007|gb|EGI84485.1| recombination protein RecR [Streptococcus pneumoniae GA41301] gi|332200231|gb|EGJ14304.1| recombination protein RecR [Streptococcus pneumoniae GA47368] gi|332201097|gb|EGJ15168.1| recombination protein RecR [Streptococcus pneumoniae GA47901] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|56750195|ref|YP_170896.1| recombination protein RecR [Synechococcus elongatus PCC 6301] gi|73621523|sp|Q5N5P2|RECR_SYNP6 RecName: Full=Recombination protein recR gi|172046613|sp|Q31NH0|RECR_SYNE7 RecName: Full=Recombination protein recR gi|56685154|dbj|BAD78376.1| recombination protein RecR [Synechococcus elongatus PCC 6301] Length = 199 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI+ L ++PG GP++A+R LHL+++ E + AEA+ +V C Sbjct: 1 MSVYTRPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ + D C IC D +RDA I VV D D+ ALE+++ LYHVLGG +SP+D IGP Sbjct: 61 CFHLSSEDLCNICRDPKRDAQTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + +Q+L+ R+ ++ +E+I AIS ++EG+TT Y+ LK ++TR+A+G+PMG + Sbjct: 121 EQLTVQALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ A+ R L Sbjct: 180 LEYADEVTLARALEGRRDL 198 >gi|260584504|ref|ZP_05852251.1| recombination protein RecR [Granulicatella elegans ATCC 700633] gi|260158022|gb|EEW93091.1| recombination protein RecR [Granulicatella elegans ATCC 700633] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 121/196 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I L+ ++PG G ++A R ++ E+ + A A+ + + +CS+CGN Sbjct: 3 YPEPIARLMDSYMKLPGIGAKTAARLAFFSMEMPEEEVMNFANALISCKRDLTMCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD + I+VVED D+ +LER K LYHVL G LSP++ GP+DI Sbjct: 63 ITQEDPCEICQDASRDRTKILVVEDSRDVMSLERMKEYKGLYHVLHGVLSPMEGTGPDDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + SLI+R++ + E+I A +AT EG+ TA Y+ +K +K+TRLA+G+ +GS+++Y Sbjct: 123 NVASLIQRLQDPTVEEVIIATNATAEGEATAMYLSRLIKPAGIKVTRLAHGLAVGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+F+AI R L Sbjct: 183 ADEMTLFKAIEGRREL 198 >gi|329767044|ref|ZP_08258572.1| recombination protein recR [Gemella haemolysans M341] gi|328837769|gb|EGF87394.1| recombination protein recR [Gemella haemolysans M341] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 117/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K I +LI + +PG G ++A R H +K + + A+++ ++ K+ C +CG Sbjct: 3 YPKPILDLIDSYSLLPGIGKKTAVRLAFHTLKMHDDDIKNFADSLVHLKEKLTNCEVCGR 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C IC D RD S+I VV + DL A+E + +YHVL G +SP+D IGP DI Sbjct: 63 LSEDHVCDICSDAGRDKSMICVVANDNDLVAMENMQQYRGVYHVLDGLISPMDGIGPLDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL ER + + ++E+I A +++ EG+ TA +I LK D+++TR+A GI GS+++Y Sbjct: 123 NIKSLFERAQDETVKEIILATNSSPEGEGTASFISRYLKNTDIRVTRIAQGISFGSDIEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ AI R L Sbjct: 183 VDEVTLSRAISGRIEL 198 >gi|300811156|ref|ZP_07091668.1| recombination protein RecR [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497860|gb|EFK32870.1| recombination protein RecR [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 199 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN Sbjct: 3 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I Sbjct: 63 ITEQDPCAICSNPTRDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANLITLKRAVQGRTEL 199 >gi|284006440|emb|CBA71686.1| recombination protein [Arsenophonus nasoniae] Length = 201 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMQLAQALTRAMSEIGHCQGCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C+IC + +R S I VVE AD++A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEKDHCSICTNPRRQQSGQICVVESPADIYAIEQTGQFVGRYFVLMGHLSPLDGIGPKD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ SL +++ + + E+I A + TIEG+ TA+YI V +R+A+GIP+G EL+ Sbjct: 123 IGLDSLADKLATETVSEVILATNPTIEGEATANYIAGICAQYQVMASRIAHGIPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ +I R + Sbjct: 183 MVDGTTLSHSIIGRQKI 199 >gi|293608165|ref|ZP_06690468.1| recombination protein recR [Acinetobacter sp. SH024] gi|292828738|gb|EFF87100.1| recombination protein recR [Acinetobacter sp. SH024] gi|325122105|gb|ADY81628.1| recombination protein, gap repair [Acinetobacter calcoaceticus PHEA-2] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTEHEICDICASTDRDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI LI+R+ I E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+ Sbjct: 121 IGIPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|289167462|ref|YP_003445731.1| recombination protein [Streptococcus mitis B6] gi|288907029|emb|CBJ21863.1| recombination protein [Streptococcus mitis B6] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVATMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|227529517|ref|ZP_03959566.1| recombination protein RecR [Lactobacillus vaginalis ATCC 49540] gi|227350602|gb|EEJ40893.1| recombination protein RecR [Lactobacillus vaginalis ATCC 49540] Length = 199 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ ++PG G ++A R + + + + A+++ + + CSICGN Sbjct: 3 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLTMQGDDVTNFAKSLLSAKRDLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE D+ A+ER + LYHVL G +SP+ GPEDI Sbjct: 63 ITEDDPCPICQDKTRDRSQILVVEQSQDVMAMERMHEYHGLYHVLNGVISPVAGTGPEDI 122 Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R+ + +I+E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D Sbjct: 123 NITSLLDRLKKDDEIKEVIIATNASSDGELTASYLAKLIKPAGIKVTRLAHGLSVGADID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 183 YADEVTLFKAVQGRTEM 199 >gi|145299|gb|AAA23459.1| recR ORF [Escherichia coli] Length = 201 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R ++++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTVLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|261493356|ref|ZP_05989882.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496622|ref|ZP_05993002.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307825|gb|EEY09148.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311000|gb|EEY12177.1| recombination protein RecR [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 201 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENL++ L +PG GP+SA+R HL+++ L++A+ + + C C Sbjct: 3 TSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALSKALNEAMSHIGHCKSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R S + VVE D+ A+E++ + Y VL G LSP+D IGP + Sbjct: 63 FTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPIDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G+P+G L+ Sbjct: 123 IGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEMCRMYNVKATRIAHGVPVGGSLE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ + R + Sbjct: 183 MVDGTTLSHSFAGRRDI 199 >gi|300172667|ref|YP_003771832.1| recombination protein RecR [Leuconostoc gasicomitatum LMG 18811] gi|299887045|emb|CBL91013.1| recombination protein RecR [Leuconostoc gasicomitatum LMG 18811] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + E+ + ++++ + + CS+CGN Sbjct: 3 YPEPIAKLIDSYTKLPGIGSKTATRLAFYTLGMDEKDVLDFSKSLVSAKKDLTFCSVCGN 62 Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + +PC IC D RD + VVE+ D+ A+E ++ + LYHVL G +SP GPE Sbjct: 63 ITENSINPCVICRDVTRDQDTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGTGPE 122 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ E ++I E+I + T EG+ TA Y+ LK +K+TRLA+G+ +GS+ Sbjct: 123 DINLPSLIRRLSEHQEIDEVIVGTNVTAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D T+ +A++ RT L Sbjct: 183 IDYADQLTLIKAVQGRTEL 201 >gi|221198094|ref|ZP_03571140.1| recombination protein RecR [Burkholderia multivorans CGD2M] gi|221204347|ref|ZP_03577364.1| recombination protein RecR [Burkholderia multivorans CGD2] gi|221175204|gb|EEE07634.1| recombination protein RecR [Burkholderia multivorans CGD2] gi|221182026|gb|EEE14427.1| recombination protein RecR [Burkholderia multivorans CGD2M] Length = 198 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 DKCNTFTEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|160893578|ref|ZP_02074362.1| hypothetical protein CLOL250_01132 [Clostridium sp. L2-50] gi|156864563|gb|EDO57994.1| hypothetical protein CLOL250_01132 [Clostridium sp. L2-50] Length = 198 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I G E+ LI+ L R+PG G ++A+R H++ E+ LA+++ N K+ C+ Sbjct: 1 MDIYGGEVNRLIEELGRLPGIGAKTAQRLAFHIISMPEERAQALADSIVNAKKKIRYCNN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + +D C IC R+ VI+VVE DL A ER+ + +YHVL G ++P IGP Sbjct: 61 CYTITDSDLCPICRSANRNHKVIMVVETPRDLAAYERTNQYDGVYHVLHGVINPSLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI I L++R+ + ELI A + EG+ TA YI +K +K++R+A G+P+G + Sbjct: 121 ADIKIAELMKRL-QGDVDELIIATGSGPEGEATAMYISKLVKPAGIKVSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D+ T+ A+ R L Sbjct: 180 LECIDEVTLLRALEGRVYL 198 >gi|309775006|ref|ZP_07670021.1| recombination protein RecR [Erysipelotrichaceae bacterium 3_1_53] gi|308917224|gb|EFP62949.1| recombination protein RecR [Erysipelotrichaceae bacterium 3_1_53] Length = 222 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K+ E L++ +PG G ++A R ++ E+ + A N + C +CG Sbjct: 1 MYPKKFEALVECYRGLPGVGIKTAERYAFQTLEWDEETMDAWISAFENAKEGLKKCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC D R++ +I VV+ D+ A+E++K +YHVL G +S I PED Sbjct: 61 NLSENDKCDICDDHSRNSQIICVVQSPKDVIAMEKTKEYAGVYHVLNGVISTSKGILPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I SL+ RI + +E+I A + T+EG+TTA Y+ L+ V +TR+A+G+PMG LD Sbjct: 121 INIDSLLSRI-TDETQEIIIATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLD 179 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ +AI R Sbjct: 180 YADELTLIKAIEGRKK 195 >gi|148543565|ref|YP_001270935.1| recombination protein RecR [Lactobacillus reuteri DSM 20016] gi|184152972|ref|YP_001841313.1| recombination protein RecR [Lactobacillus reuteri JCM 1112] gi|194468112|ref|ZP_03074098.1| recombination protein RecR [Lactobacillus reuteri 100-23] gi|227363475|ref|ZP_03847597.1| recombination protein RecR [Lactobacillus reuteri MM2-3] gi|325681915|ref|ZP_08161433.1| recombination protein R [Lactobacillus reuteri MM4-1A] gi|172048231|sp|A5VIC4|RECR_LACRD RecName: Full=Recombination protein recR gi|229470338|sp|B2G5V1|RECR_LACRJ RecName: Full=Recombination protein recR gi|148530599|gb|ABQ82598.1| DNA replication and repair protein RecR [Lactobacillus reuteri DSM 20016] gi|183224316|dbj|BAG24833.1| recombination protein RecR [Lactobacillus reuteri JCM 1112] gi|194452965|gb|EDX41863.1| recombination protein RecR [Lactobacillus reuteri 100-23] gi|227071489|gb|EEI09790.1| recombination protein RecR [Lactobacillus reuteri MM2-3] gi|324978559|gb|EGC15508.1| recombination protein R [Lactobacillus reuteri MM4-1A] Length = 200 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN Sbjct: 4 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLSMQEDDVTNFAKSLLSAKRDLHNCSICGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE D+ A+ER + LYHVL G +SP+ GPEDI Sbjct: 64 ITEDDPCPICRDKTRDHSQILVVEQSQDVMAMERMHEYHGLYHVLHGVISPVAGTGPEDI 123 Query: 126 GIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R+ + +++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D Sbjct: 124 NITSLLKRLKKDDEVKEIIIATNASSDGELTAGYLAKLIKPAGIKVTRLAHGLSVGADID 183 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 184 YADEMTLFKAVQGRTEM 200 >gi|87200908|ref|YP_498165.1| recombination protein RecR [Novosphingobium aromaticivorans DSM 12444] gi|123488327|sp|Q2G492|RECR_NOVAD RecName: Full=Recombination protein recR gi|87136589|gb|ABD27331.1| recombination protein RecR [Novosphingobium aromaticivorans DSM 12444] Length = 198 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 100/196 (51%), Positives = 142/196 (72%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +EIE L LAR+PG GPRSARRA L L+K++E L L A+ + + C +CG Sbjct: 1 MASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT++PC IC D +RD I VVE+VADLWAL+R++ YHVLGG LS L+ + PED Sbjct: 61 NVDTSNPCGICTDHRRDQRSICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL++R+ I E++ A++AT+EGQTTAHYI ++L+G V++T+LA+G+P+G ELD Sbjct: 121 LTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEGAAVRVTQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|303250208|ref|ZP_07336409.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|171855133|sp|A3MYE6|RECR_ACTP2 RecName: Full=Recombination protein recR gi|302650919|gb|EFL81074.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 109/194 (56%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENL++ L +PG GP+SA+R HL+++ L++A+ + C C Sbjct: 4 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +I Sbjct: 64 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ Sbjct: 124 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 183 Query: 186 LDDGTIFEAIRSRT 199 +D T+ + R Sbjct: 184 VDGTTLSHSFAGRR 197 >gi|332666194|ref|YP_004448982.1| Recombination protein recR [Haliscomenobacter hydrossis DSM 1100] gi|332335008|gb|AEE52109.1| Recombination protein recR [Haliscomenobacter hydrossis DSM 1100] Length = 203 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 120/196 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E+ + A +PG G ++A R LHLV ++ + +A+ + ++ C + Sbjct: 1 MNFSSKLLEDAVNAFASLPGIGKKTALRLVLHLVNREVDTVDQFGDAIVKMRREIKSCKV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC D +RD V+ VVE++ D+ A+E + LYHVLGG +SPL+ +GP Sbjct: 61 CHNLSDEELCMICRDARRDHQVVCVVENIRDVMAIEDTGQYRGLYHVLGGVISPLEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SL++RI +++E++ AIS TIEG+TT YI +LK + V I+ +A G+ G E Sbjct: 121 SELTIDSLVQRITNNEVKEIVMAISPTIEGETTIFYISKRLKDLHVNISTIARGVSFGGE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADELTLGRSIVAR 196 >gi|330817180|ref|YP_004360885.1| Recombination protein RecR [Burkholderia gladioli BSR3] gi|327369573|gb|AEA60929.1| Recombination protein RecR [Burkholderia gladioli BSR3] Length = 198 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + C +C D +RD S++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTESRICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|90407632|ref|ZP_01215812.1| recombination protein RecR [Psychromonas sp. CNPT3] gi|90311223|gb|EAS39328.1| recombination protein RecR [Psychromonas sp. CNPT3] Length = 199 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 115/199 (57%), Gaps = 2/199 (1%) Query: 5 ITGKEI-ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 ++ + + L++ L +PG GP+SA+R T HL+ K L+ + +++ C C Sbjct: 1 MSSTSLLDELMQALQCLPGVGPKSAQRMTYHLLDKNRSGALKLSHLLERGVHEIGHCQQC 60 Query: 64 GNVDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 + C++C +++R I VVE D+ A+E++ + Y VL G LSPLD IGP Sbjct: 61 RTFTELNLCSLCSNEKRKVNGQICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E +G+ L ++I + E+I A + T+EG+ TA+YI + K VK++R+A+G+P+G E Sbjct: 121 EQLGLALLEQQISAPHVTEVILATNPTVEGEATAYYIAEIAKKFHVKVSRIAHGVPVGGE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y+D T+ + R+ + Sbjct: 181 LEYVDSTTLSHSFAGRSEI 199 >gi|16759465|ref|NP_455082.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763866|ref|NP_459481.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142763|ref|NP_806105.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414359|ref|YP_151434.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615316|ref|YP_001589281.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550987|ref|ZP_02344743.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990473|ref|ZP_02571573.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231477|ref|ZP_02656535.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237603|ref|ZP_02662661.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240317|ref|ZP_02665249.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261075|ref|ZP_02683048.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465583|ref|ZP_02699465.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818897|ref|ZP_02830897.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444330|ref|YP_002039729.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448771|ref|YP_002044519.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470304|ref|ZP_03076288.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735608|ref|YP_002113517.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248347|ref|YP_002145469.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263068|ref|ZP_03163142.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363279|ref|YP_002142916.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243466|ref|YP_002214439.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200391025|ref|ZP_03217636.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930603|ref|ZP_03221533.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205351794|ref|YP_002225595.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855965|ref|YP_002242616.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213022745|ref|ZP_03337192.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213163419|ref|ZP_03349129.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427145|ref|ZP_03359895.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213579999|ref|ZP_03361825.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615956|ref|ZP_03371782.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650776|ref|ZP_03380829.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865426|ref|ZP_03387545.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224582323|ref|YP_002636121.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911384|ref|ZP_04655221.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289811209|ref|ZP_06541838.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289828677|ref|ZP_06546476.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54039040|sp|P65993|RECR_SALTI RecName: Full=Recombination protein recR gi|54041799|sp|P65992|RECR_SALTY RecName: Full=Recombination protein recR gi|73621514|sp|Q5PFK6|RECR_SALPA RecName: Full=Recombination protein recR gi|189029372|sp|A9MW89|RECR_SALPB RecName: Full=Recombination protein recR gi|226726307|sp|B5EXM8|RECR_SALA4 RecName: Full=Recombination protein recR gi|226726308|sp|B5FLJ4|RECR_SALDC RecName: Full=Recombination protein recR gi|226726309|sp|B5QU75|RECR_SALEP RecName: Full=Recombination protein recR gi|226726310|sp|B5R610|RECR_SALG2 RecName: Full=Recombination protein recR gi|229485576|sp|B4T9H9|RECR_SALHS RecName: Full=Recombination protein recR gi|229485577|sp|B4SWX9|RECR_SALNS RecName: Full=Recombination protein recR gi|229485578|sp|B5BD46|RECR_SALPK RecName: Full=Recombination protein recR gi|229485579|sp|B4TMG4|RECR_SALSV RecName: Full=Recombination protein recR gi|254790781|sp|C0Q810|RECR_SALPC RecName: Full=Recombination protein recR gi|25300540|pir||AI0562 recombination protein RecR [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418994|gb|AAL19440.1| putative recombination protein, gap repair [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501757|emb|CAD04971.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi] gi|29138395|gb|AAO69965.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128616|gb|AAV78122.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364680|gb|ABX68448.1| hypothetical protein SPAB_03086 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402993|gb|ACF63215.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407075|gb|ACF67294.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456668|gb|EDX45507.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711110|gb|ACF90331.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631916|gb|EDX50436.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094756|emb|CAR60289.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212050|gb|ACH49447.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241323|gb|EDY23943.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289528|gb|EDY28891.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937982|gb|ACH75315.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603470|gb|EDZ02016.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320537|gb|EDZ05740.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271575|emb|CAR36395.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324246|gb|EDZ12085.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330831|gb|EDZ17595.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334145|gb|EDZ20909.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339737|gb|EDZ26501.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344002|gb|EDZ30766.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350079|gb|EDZ36710.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707768|emb|CAR32053.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466850|gb|ACN44680.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245768|emb|CBG23565.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992203|gb|ACY87088.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157095|emb|CBW16579.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911518|dbj|BAJ35492.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084761|emb|CBY94551.1| Recombination protein recR [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226064|gb|EFX51115.1| Recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614762|gb|EFY11691.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618869|gb|EFY15757.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623576|gb|EFY20415.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629125|gb|EFY25904.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631846|gb|EFY28600.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637417|gb|EFY34119.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642102|gb|EFY38712.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645874|gb|EFY42395.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652336|gb|EFY48691.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653239|gb|EFY49572.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660612|gb|EFY56848.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664764|gb|EFY60957.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669183|gb|EFY65333.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670728|gb|EFY66861.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679033|gb|EFY75088.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682062|gb|EFY78087.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685109|gb|EFY81106.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128805|gb|ADX16235.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192997|gb|EFZ78220.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196921|gb|EFZ82063.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203906|gb|EFZ88923.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207009|gb|EFZ91962.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214212|gb|EFZ98970.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214464|gb|EFZ99215.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219193|gb|EGA03690.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226970|gb|EGA11151.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230212|gb|EGA14332.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233950|gb|EGA18039.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238356|gb|EGA22414.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244043|gb|EGA28052.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246631|gb|EGA30605.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251830|gb|EGA35693.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257826|gb|EGA41505.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261160|gb|EGA44752.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264910|gb|EGA48409.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272473|gb|EGA55880.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622186|gb|EGE28531.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626830|gb|EGE33173.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987435|gb|AEF06418.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|46143302|ref|ZP_00135500.2| COG0353: Recombinational DNA repair protein (RecF pathway) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207562|ref|YP_001052787.1| recombination protein RecR [Actinobacillus pleuropneumoniae L20] gi|307249274|ref|ZP_07531269.1| hypothetical protein appser4_890 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251596|ref|ZP_07533502.1| hypothetical protein appser6_1190 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256095|ref|ZP_07537882.1| hypothetical protein appser10_1000 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260528|ref|ZP_07542221.1| hypothetical protein appser12_1020 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096354|gb|ABN73182.1| recombination protein RecR [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306858673|gb|EFM90734.1| hypothetical protein appser4_890 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860907|gb|EFM92914.1| hypothetical protein appser6_1190 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865276|gb|EFM97172.1| hypothetical protein appser10_1000 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869757|gb|EFN01541.1| hypothetical protein appser12_1020 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 221 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 109/194 (56%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENL++ L +PG GP+SA+R HL+++ L++A+ + C C Sbjct: 24 SPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTF 83 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE D+ A+E++ + Y VL G LSPLD IGP +I Sbjct: 84 TEEDECNICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREI 143 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L R+E + E+I A + TIEG TA+YI + + +VK+TR+A+GIP+G L+ Sbjct: 144 GLDLLQSRLENESFHEVILATNPTIEGDATANYIAEMCRIHNVKVTRIAHGIPVGGSLEM 203 Query: 186 LDDGTIFEAIRSRT 199 +D T+ + R Sbjct: 204 VDGTTLSHSFAGRR 217 >gi|113970587|ref|YP_734380.1| recombination protein RecR [Shewanella sp. MR-4] gi|114047818|ref|YP_738368.1| recombination protein RecR [Shewanella sp. MR-7] gi|123130341|sp|Q0HHZ4|RECR_SHESM RecName: Full=Recombination protein recR gi|123326453|sp|Q0HU94|RECR_SHESR RecName: Full=Recombination protein recR gi|113885271|gb|ABI39323.1| DNA replication and repair protein RecR [Shewanella sp. MR-4] gi|113889260|gb|ABI43311.1| DNA replication and repair protein RecR [Shewanella sp. MR-7] Length = 199 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDIGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R +S I VVE AD+ A+E + Y VL G LSPLD +GPE+ Sbjct: 63 YTEESLCPICASHKRGSSSTICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVVISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRIPL 199 >gi|313124286|ref|YP_004034545.1| recombination protein recr [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280849|gb|ADQ61568.1| Recombination protein recR [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325685700|gb|EGD27779.1| recombination protein R [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 199 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN Sbjct: 3 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I Sbjct: 63 ITEQDPCAICSNPARDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANLITLKRAVQGRTEL 199 >gi|59712292|ref|YP_205068.1| recombination protein RecR [Vibrio fischeri ES114] gi|197334321|ref|YP_002156504.1| recombination protein RecR [Vibrio fischeri MJ11] gi|71648824|sp|Q5E466|RECR_VIBF1 RecName: Full=Recombination protein recR gi|226726313|sp|B5FFM4|RECR_VIBFM RecName: Full=Recombination protein recR gi|59480393|gb|AAW86180.1| gap repair protein [Vibrio fischeri ES114] gi|197315811|gb|ACH65258.1| recombination protein RecR [Vibrio fischeri MJ11] Length = 200 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ Q LA+A++ +++ CS C Sbjct: 3 TSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSQAMSEIGHCSECRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC++ +R AS + +VE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEDTCAICLNPKRQASGEMCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+PMG EL+ Sbjct: 123 IGLDLLDHRLNRGDIKEVILATNPTVEGEATAHYIAELCQEHQVPASRIAHGVPMGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ +I R L Sbjct: 183 LVDGTTLSHSILGRQKL 199 >gi|169633536|ref|YP_001707272.1| recombination protein, gap repair [Acinetobacter baumannii SDF] gi|169796040|ref|YP_001713833.1| recombination protein, gap repair [Acinetobacter baumannii AYE] gi|184158039|ref|YP_001846378.1| recombination protein RecR [Acinetobacter baumannii ACICU] gi|213157226|ref|YP_002319271.1| recombination protein RecR [Acinetobacter baumannii AB0057] gi|215483498|ref|YP_002325715.1| recombination protein RecR [Acinetobacter baumannii AB307-0294] gi|239501842|ref|ZP_04661152.1| recombination protein RecR [Acinetobacter baumannii AB900] gi|260554177|ref|ZP_05826435.1| recombinational DNA repair protein [Acinetobacter sp. RUH2624] gi|260555082|ref|ZP_05827303.1| recombination protein RecR [Acinetobacter baumannii ATCC 19606] gi|301345594|ref|ZP_07226335.1| recombination protein RecR [Acinetobacter baumannii AB056] gi|301510305|ref|ZP_07235542.1| recombination protein RecR [Acinetobacter baumannii AB058] gi|301597269|ref|ZP_07242277.1| recombination protein RecR [Acinetobacter baumannii AB059] gi|332851690|ref|ZP_08433615.1| recombination protein RecR [Acinetobacter baumannii 6013150] gi|332865935|ref|ZP_08436715.1| recombination protein RecR [Acinetobacter baumannii 6013113] gi|332874499|ref|ZP_08442402.1| recombination protein RecR [Acinetobacter baumannii 6014059] gi|169148967|emb|CAM86844.1| recombination protein, gap repair [Acinetobacter baumannii AYE] gi|169152328|emb|CAP01250.1| recombination protein, gap repair [Acinetobacter baumannii] gi|183209633|gb|ACC57031.1| Recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii ACICU] gi|193077319|gb|ABO12112.2| recombination protein gap repair [Acinetobacter baumannii ATCC 17978] gi|213056386|gb|ACJ41288.1| recombination protein RecR [Acinetobacter baumannii AB0057] gi|213986008|gb|ACJ56307.1| recombination protein RecR [Acinetobacter baumannii AB307-0294] gi|260404683|gb|EEW98195.1| recombinational DNA repair protein [Acinetobacter sp. RUH2624] gi|260411624|gb|EEX04921.1| recombination protein RecR [Acinetobacter baumannii ATCC 19606] gi|322508358|gb|ADX03812.1| recR [Acinetobacter baumannii 1656-2] gi|323517980|gb|ADX92361.1| recombination protein RecR [Acinetobacter baumannii TCDC-AB0715] gi|332729697|gb|EGJ61032.1| recombination protein RecR [Acinetobacter baumannii 6013150] gi|332734985|gb|EGJ66071.1| recombination protein RecR [Acinetobacter baumannii 6013113] gi|332737343|gb|EGJ68267.1| recombination protein RecR [Acinetobacter baumannii 6014059] Length = 198 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + E L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTEHEICDICASTERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI LI+R+ I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+ Sbjct: 121 IGIPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|260574233|ref|ZP_05842238.1| recombination protein RecR [Rhodobacter sp. SW2] gi|259023699|gb|EEW26990.1| recombination protein RecR [Rhodobacter sp. SW2] Length = 199 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 103/193 (53%), Positives = 135/193 (69%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +IE LI+++AR+PG GPRSARRA L L+KK+ L+ PLA+AMA + C+ CGN+ Sbjct: 5 PGDIEQLIELMARLPGLGPRSARRAVLVLLKKRGALMAPLAQAMAQVALSARDCTTCGNI 64 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 D CAIC D +R + VVEDVADLWA+ER A YHVLGG+LSPLD +GP+ + Sbjct: 65 GAGDTCAICADPRRATGELCVVEDVADLWAMERGGAFKGRYHVLGGTLSPLDAVGPDTLR 124 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I L+ R+ + I E+I A++AT++GQTTAHYI D L V IT LA G+P+G ELDYL Sbjct: 125 IPRLLARVAEEGISEVILALNATVDGQTTAHYIADVLGASGVAITSLAQGVPIGGELDYL 184 Query: 187 DDGTIFEAIRSRT 199 DDGTI A+++R Sbjct: 185 DDGTIGAALKARK 197 >gi|325285404|ref|YP_004261194.1| Recombination protein recR [Cellulophaga lytica DSM 7489] gi|324320858|gb|ADY28323.1| Recombination protein recR [Cellulophaga lytica DSM 7489] Length = 206 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 125/198 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++++PG G R+A R LHL+K+ + L+ ++ + ++ CS Sbjct: 1 MDFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPKDQTSALSNSLLKLREEIKFCSN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + +RD S++ VVED+ D+ A+E + LYHVLGG +SP++ +GP Sbjct: 61 CHNISDVVLCEICANPKRDESIVCVVEDIRDVMAIENTGQYRGLYHVLGGRISPMEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I SL+ + + I+ELIFA+S+T+EG TT YI +++G+ +K + +A GI +G E Sbjct: 121 QNLTIDSLVNKSKEGIIKELIFALSSTMEGDTTNFYIYKQIEGMGLKTSTIARGIAVGDE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSILNRVP 198 >gi|313888962|ref|ZP_07822622.1| recombination protein RecR [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845135|gb|EFR32536.1| recombination protein RecR [Peptoniphilus harei ACS-146-V-Sch2b] Length = 200 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I IE+LIK L R+PG G ++A+R +++ E + LAEA+ + N C Sbjct: 1 MTKEIGP--IEDLIKRLNRLPGIGSKTAQRLAYYIIGLDETEVRDLAEALISAKNNTVEC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SIC N +DPC IC ++ RD SVI VVE D+ A+ERS + YHVL G +SPL Sbjct: 59 SICMNYADSDPCEICSNKNRDDSVICVVESPKDVDAMERSLSFRGKYHVLHGVISPLKGK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PED+ I+ LI+RIE I+E+I A + T++G TA YI + L+ D+ ++R+ YG+P+G Sbjct: 119 TPEDVTIKELIKRIEEGDIKEVIVATNPTVDGDATARYIKNILEDYDIIVSRIGYGLPVG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ TI A+ +R L Sbjct: 179 GDLEYYDEITIQTAMENRRRL 199 >gi|104774439|ref|YP_619419.1| recombination protein RecR [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514538|ref|YP_813444.1| recombination protein RecR [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274730|sp|Q048W6|RECR_LACDB RecName: Full=Recombination protein recR gi|122983905|sp|Q1G921|RECR_LACDA RecName: Full=Recombination protein recR gi|103423520|emb|CAI98422.1| Recombination protein RecR [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093853|gb|ABJ59006.1| DNA replication and repair protein RecR [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126249|gb|ADY85579.1| Recombination protein recR [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 199 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN Sbjct: 3 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I Sbjct: 63 ITEQDPCAICSNPVRDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLIVRLQKNDAAKEVILALNSTPEGESTAMYISRLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANLITLKRAVQGRTEL 199 >gi|225012671|ref|ZP_03703106.1| recombination protein RecR [Flavobacteria bacterium MS024-2A] gi|225003204|gb|EEG41179.1| recombination protein RecR [Flavobacteria bacterium MS024-2A] Length = 206 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 126/196 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN ++ +A++PG G R+A R LHL+K+ + LA+A+ ++ + C Sbjct: 1 MDFSSKLLENAVQEIAQLPGIGRRTALRLALHLLKQPVEHTQSLAKALTSLREGIIFCDR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC +R+ S++ VVED+ D+ A+E + N LYHVLGG +SP+D IGP Sbjct: 61 CHNLSDAPTCEICSSPKRNKSILCVVEDIRDVMAIENTGQYNGLYHVLGGIISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SL+E+++ ++ ELIFA+SAT+E TT YI LK ++K + +A GIP+G E Sbjct: 121 QDLTINSLLEKVKNNEVSELIFALSATMEADTTNFYIYKLLKPFEIKTSTIARGIPVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L++ D+ T+ +I +R Sbjct: 181 LEFTDEVTLGRSILAR 196 >gi|91223618|ref|ZP_01258883.1| recombination protein RecR [Vibrio alginolyticus 12G01] gi|269966014|ref|ZP_06180106.1| recombination protein RecR [Vibrio alginolyticus 40B] gi|91191704|gb|EAS77968.1| recombination protein RecR [Vibrio alginolyticus 12G01] gi|269829410|gb|EEZ83652.1| recombination protein RecR [Vibrio alginolyticus 40B] Length = 199 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + K V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCKEHQVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRHRI 199 >gi|260596871|ref|YP_003209442.1| recombination protein RecR [Cronobacter turicensis z3032] gi|260216048|emb|CBA28761.1| Recombination protein recR [Cronobacter turicensis z3032] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEKCNICTNPRRQENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + ++E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEAEPLKEIILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKM 199 >gi|292487504|ref|YP_003530376.1| recombination protein recR [Erwinia amylovora CFBP1430] gi|292898745|ref|YP_003538114.1| recombination protein [Erwinia amylovora ATCC 49946] gi|291198593|emb|CBJ45701.1| recombination protein [Erwinia amylovora ATCC 49946] gi|291552923|emb|CBA19968.1| Recombination protein recR [Erwinia amylovora CFBP1430] gi|312171609|emb|CBX79867.1| Recombination protein recR [Erwinia amylovora ATCC BAA-2158] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + +I VVE AD+ A+E++ Y VL G LSPLD IGP+D Sbjct: 63 FTEQDICTICANPRRRQNGLICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEKESIQEVILATNPTVEGEATANYIASLCEQYGVDASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLVGRQK 198 >gi|270263613|ref|ZP_06191882.1| recombination protein RecR [Serratia odorifera 4Rx13] gi|270042497|gb|EFA15592.1| recombination protein RecR [Serratia odorifera 4Rx13] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQDICTICANPRRLQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEKESITEVILATNPTVEGDATANYIAEMCGQYGVVASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R V+ Sbjct: 183 MVDGTTLSHSLAGRNVI 199 >gi|161504339|ref|YP_001571451.1| recombination protein RecR [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189029371|sp|A9MLY7|RECR_SALAR RecName: Full=Recombination protein recR gi|160865686|gb|ABX22309.1| hypothetical protein SARI_02448 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ ++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMAEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICANPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLVSEKISELILATNPTVEGEATANYIAELCAQYGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|168488614|ref|ZP_02712813.1| recombination protein RecR [Streptococcus pneumoniae SP195] gi|221232409|ref|YP_002511562.1| recombination protein RecR [Streptococcus pneumoniae ATCC 700669] gi|225855102|ref|YP_002736614.1| recombination protein RecR [Streptococcus pneumoniae JJA] gi|225859427|ref|YP_002740937.1| recombination protein RecR [Streptococcus pneumoniae 70585] gi|254790785|sp|C1C8R1|RECR_STRP7 RecName: Full=Recombination protein recR gi|254790786|sp|B8ZM67|RECR_STRPJ RecName: Full=Recombination protein recR gi|254790788|sp|C1CFP3|RECR_STRZJ RecName: Full=Recombination protein recR gi|6634558|emb|CAB64458.1| recombination protein [Streptococcus pneumoniae] gi|6634563|emb|CAB64462.1| recombination protein [Streptococcus pneumoniae] gi|6634568|emb|CAB64466.1| recombination protein [Streptococcus pneumoniae] gi|183572659|gb|EDT93187.1| recombination protein RecR [Streptococcus pneumoniae SP195] gi|220674870|emb|CAR69445.1| recombination protein RecR [Streptococcus pneumoniae ATCC 700669] gi|225720091|gb|ACO15945.1| recombination protein RecR [Streptococcus pneumoniae 70585] gi|225722656|gb|ACO18509.1| recombination protein RecR [Streptococcus pneumoniae JJA] gi|332072501|gb|EGI82984.1| recombination protein RecR [Streptococcus pneumoniae GA17570] gi|332199701|gb|EGJ13776.1| recombination protein RecR [Streptococcus pneumoniae GA41317] Length = 198 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDSTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|227545159|ref|ZP_03975208.1| recombination protein RecR [Lactobacillus reuteri CF48-3A] gi|300909168|ref|ZP_07126629.1| recombination protein R [Lactobacillus reuteri SD2112] gi|227184891|gb|EEI64962.1| recombination protein RecR [Lactobacillus reuteri CF48-3A] gi|300893033|gb|EFK86392.1| recombination protein R [Lactobacillus reuteri SD2112] Length = 200 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN Sbjct: 4 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLSMQEDDVTNFAKSLLSAKRDLHNCSICGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE + D+ A+ER + LYHVL G +SP+ GPEDI Sbjct: 64 ITEDDPCPICRDKTRDHSQILVVEQLQDVMAMERMHEYHGLYHVLHGVISPVAGTGPEDI 123 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R++ +E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D Sbjct: 124 NITSLLKRLKKDNEVKEIIIATNASSDGELTAGYLAKLIKPAGIKVTRLAHGLSVGADID 183 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 184 YADEMTLFKAVQGRTEM 200 >gi|85373242|ref|YP_457304.1| recombination protein RecR [Erythrobacter litoralis HTCC2594] gi|122545155|sp|Q2NCT4|RECR_ERYLH RecName: Full=Recombination protein recR gi|84786325|gb|ABC62507.1| recombinational DNA repair protein [Erythrobacter litoralis HTCC2594] Length = 198 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 103/196 (52%), Positives = 142/196 (72%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +EIE L LAR+PG GPRSARRA L LVKK++ L L EA+ + +++ C CG Sbjct: 1 MASQEIEQLASTLARLPGLGPRSARRAVLWLVKKRDTALPALLEALEGVQDRLVECDTCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT +PC IC D +RD I VVEDVADLWAL+R++ YHVLGG LS LD + PED Sbjct: 61 NVDTQNPCGICADPRRDRKSICVVEDVADLWALDRARLFTGRYHVLGGKLSALDGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ R+E I E++ A++AT+EGQTT+HYI ++L+ V+IT+LA+G+P+G ELD Sbjct: 121 LNIANLLGRVEEGGIDEVVLAMNATLEGQTTSHYIAERLEEFPVRITQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|255745473|ref|ZP_05419421.1| recombination protein RecR [Vibrio cholera CIRS 101] gi|255736548|gb|EET91945.1| recombination protein RecR [Vibrio cholera CIRS 101] Length = 195 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 1/193 (0%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQ 61 Query: 70 DPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ Sbjct: 62 DVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L R++ I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D Sbjct: 122 TLDYRLQRGDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDG 181 Query: 189 GTIFEAIRSRTVL 201 T+ ++ R L Sbjct: 182 TTLSHSLLGRHKL 194 >gi|84393358|ref|ZP_00992118.1| recombination protein RecR [Vibrio splendidus 12B01] gi|86148365|ref|ZP_01066658.1| recombination protein RecR [Vibrio sp. MED222] gi|218708916|ref|YP_002416537.1| recombination protein RecR [Vibrio splendidus LGP32] gi|254790791|sp|B7VL98|RECR_VIBSL RecName: Full=Recombination protein recR gi|84376074|gb|EAP92962.1| recombination protein RecR [Vibrio splendidus 12B01] gi|85833848|gb|EAQ52013.1| recombination protein RecR [Vibrio sp. MED222] gi|218321935|emb|CAV17930.1| Recombination protein recR [Vibrio splendidus LGP32] Length = 199 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C+ C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNECRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEETCHICTNPKRQDNGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + +V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRHKI 199 >gi|323140456|ref|ZP_08075384.1| recombination protein RecR [Phascolarctobacterium sp. YIT 12067] gi|322415024|gb|EFY05815.1| recombination protein RecR [Phascolarctobacterium sp. YIT 12067] Length = 199 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 124/201 (61%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + I + + NL + L R+PG G ++A R H++ + + LA A++ ++ C Sbjct: 1 MARMI--RPLANLYEQLRRLPGIGSKTAMRLAYHVIDMPAEDVKQLAAALSGAKEQIHYC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N+ +D C IC D RD+ I VVE D+ A+ERS + LYHVL G LSPLD I Sbjct: 59 SRCFNLTDSDVCEICRDSSRDSFTICVVEQPQDIAAMERSHGYHGLYHVLHGVLSPLDGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + I+ L+ R++ + + E+I A ++ +EG+ TA Y+ LK + + ++R+A+G+PMG Sbjct: 119 GPEKLRIRELLLRLQQESVSEIIIATNSDVEGEATATYLAQLLKPVGITVSRIAHGLPMG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +L+Y D+ T+ +A+ +R + Sbjct: 179 GDLEYADEITLSKALENRRTM 199 >gi|126725866|ref|ZP_01741708.1| recombination protein RecR [Rhodobacterales bacterium HTCC2150] gi|126705070|gb|EBA04161.1| recombination protein RecR [Rhodobacterales bacterium HTCC2150] Length = 198 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 KEIENLI ++A++PG GPRSARRA LHL+KK+ QLL PL+ +M + C CGN Sbjct: 4 ATKEIENLIDMMAKLPGLGPRSARRAVLHLIKKRGQLLAPLSASMQEVTATARECVSCGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T+ C IC +R I VVEDVADLWA+ER++ YHVLGG+LS LD IGPE + Sbjct: 64 IGTSVTCEICQSPKRATGEICVVEDVADLWAMERARVFKGRYHVLGGTLSALDAIGPEQL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ RI+ + I E+I A++ATI+GQTTAHYI D+++G V +T LA G+P+G ELDY Sbjct: 124 GIPRLLSRIKAEDITEVILALNATIDGQTTAHYIADQIEGH-VTVTSLAQGVPIGGELDY 182 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI A+R+R Sbjct: 183 LDDGTISAALRARKT 197 >gi|167587034|ref|ZP_02379422.1| recombination protein RecR [Burkholderia ubonensis Bu] Length = 198 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCSDTERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|282882934|ref|ZP_06291539.1| recombination protein RecR [Peptoniphilus lacrimalis 315-B] gi|281297345|gb|EFA89836.1| recombination protein RecR [Peptoniphilus lacrimalis 315-B] Length = 201 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 123/194 (63%), Gaps = 1/194 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 IE LI+ L R+PG GP++A+R H++ + + LA+++ I +KV CS+C N+ Sbjct: 7 PIEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELADSIGTIKSKVKKCSLCCNISD 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 TDPC IC D RD S I VV+ D+ A+ER+ LYHVL G +SPL DI Sbjct: 67 TDPCNICQDNNRDKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFV 126 Query: 129 SLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 LI+R+ K+I+E+I A S T++G TA ++++ LK D+K+TR+ YG+P+G +L+Y D Sbjct: 127 ELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYD 186 Query: 188 DGTIFEAIRSRTVL 201 + TI A+++R L Sbjct: 187 EITISAALKNRREL 200 >gi|300814122|ref|ZP_07094405.1| recombination protein RecR [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511779|gb|EFK38996.1| recombination protein RecR [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 201 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 IE LI+ L R+PG GP++A+R H++ + + LA ++ I +KV CS+C N+ Sbjct: 7 PIEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELANSIGTIKSKVKKCSLCCNISD 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 TDPC IC D RD S I VV+ D+ A+ER+ LYHVL G +SPL DI Sbjct: 67 TDPCNICQDNNRDKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFV 126 Query: 129 SLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 LI+R+ K+I+E+I A S T++G TA ++++ LK D+K+TR+ YG+P+G +L+Y D Sbjct: 127 ELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYD 186 Query: 188 DGTIFEAIRSRTVL 201 + TI A+++R L Sbjct: 187 EITISAALKNRREL 200 >gi|226954028|ref|ZP_03824492.1| recombination protein, gap repair [Acinetobacter sp. ATCC 27244] gi|294650366|ref|ZP_06727733.1| recombination protein R [Acinetobacter haemolyticus ATCC 19194] gi|226835218|gb|EEH67601.1| recombination protein, gap repair [Acinetobacter sp. ATCC 27244] gi|292823779|gb|EFF82615.1| recombination protein R [Acinetobacter haemolyticus ATCC 19194] Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 125/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + E L++ L +P GP+SA+R LHL+ K + L+ A+ + + C IC Sbjct: 1 MFSERFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALSHALHEASSHIHECHICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTENEICDICASTERDEQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI LI+R+ K++E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+ Sbjct: 121 IGIPYLIQRLSEGKVQEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|148997723|ref|ZP_01825287.1| recombination protein RecR [Streptococcus pneumoniae SP11-BS70] gi|147756222|gb|EDK63264.1| recombination protein RecR [Streptococcus pneumoniae SP11-BS70] Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ A+E + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYPGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|50085407|ref|YP_046917.1| recombination protein RecR [Acinetobacter sp. ADP1] gi|73621454|sp|Q6FA18|RECR_ACIAD RecName: Full=Recombination protein recR gi|49531383|emb|CAG69095.1| recombination protein, gap repair [Acinetobacter sp. ADP1] Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 123/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + E L++ L +P GP+SA+R LHL+ K + LA A+ + + C IC Sbjct: 1 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC+ RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTENEICDICLSNDRDQHLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI LI+R+ +I E+I A +AT+EGQ TAHY+++ K + V +TR+A G+P G EL+ Sbjct: 121 IGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATKHLPVHMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMKM 197 >gi|126731111|ref|ZP_01746919.1| recombination protein RecR [Sagittula stellata E-37] gi|126708413|gb|EBA07471.1| recombination protein RecR [Sagittula stellata E-37] Length = 197 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 100/191 (52%), Positives = 138/191 (72%), Gaps = 1/191 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I+ LI ++AR+PG GPRSARRA LHL++K+ LL PL+EAM + C CGNV T Sbjct: 6 PIDTLIGLMARLPGLGPRSARRAVLHLIRKRGPLLQPLSEAMTEVARTARECLNCGNVST 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 +D C IC D+ R ++ VVEDVADLWA+ER++ YHVLGG+LS LD +GP+++ I Sbjct: 66 SDICPICTDEGRGNGLLCVVEDVADLWAMERAQVFRGRYHVLGGTLSALDGVGPDELRIP 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V ++ LA G+P+G ELDYLDD Sbjct: 126 RLMDRLGAENVTEVILALNATIDGQTTAHYIADQLEGR-VSVSSLAQGVPIGGELDYLDD 184 Query: 189 GTIFEAIRSRT 199 GTI A+ +R Sbjct: 185 GTITAALNARK 195 >gi|260432376|ref|ZP_05786347.1| recombination protein RecR [Silicibacter lacuscaerulensis ITI-1157] gi|260416204|gb|EEX09463.1| recombination protein RecR [Silicibacter lacuscaerulensis ITI-1157] Length = 197 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 104/196 (53%), Positives = 139/196 (70%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +I+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+AM + C CGN Sbjct: 3 SNSDIDALIDLMAKLPGLGPRSARRAVLHLIRKRALLLTPLADAMQQVAATARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC + R + VVEDVADLWA+ER+ YHVLGG+LS LD +GPED+ Sbjct: 63 VGTTDICDICNSEDRATGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDGVGPEDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L +R+ + I E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLRDRVTAENITEVILALNATVDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R L Sbjct: 182 LDDGTITAALRARKEL 197 >gi|226303880|ref|YP_002763838.1| recombination protein RecR [Rhodococcus erythropolis PR4] gi|229492582|ref|ZP_04386385.1| recombination protein RecR [Rhodococcus erythropolis SK121] gi|226182995|dbj|BAH31099.1| recombination protein RecR [Rhodococcus erythropolis PR4] gi|229320568|gb|EEN86386.1| recombination protein RecR [Rhodococcus erythropolis SK121] Length = 206 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L ++PG GP+SA+R HL+ + + L A+ I + V C++CG Sbjct: 1 MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRIRDGVQFCTVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V + C IC D +RD +VI VVE+ D+ A+ER++ YHVLGG+L+PL IGP+ Sbjct: 61 TVSDQEKCRICADARRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALNPLSGIGPDQ 120 Query: 125 IGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 + I+ L+ RI ++ E+I A EG+ TA Y++ ++ + ++RLA G+PM Sbjct: 121 LRIRELLARIANQEDGVDVSEVIIATDPNTEGEATATYLVRMMRDIPGLTVSRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADELTLGRALSGRREL 202 >gi|223939213|ref|ZP_03631095.1| recombination protein RecR [bacterium Ellin514] gi|223892166|gb|EEF58645.1| recombination protein RecR [bacterium Ellin514] Length = 200 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + I L IL+R+PG GPRSA R LHLV+ + LA+ + ++ C Sbjct: 1 MAS--LPEPITTLTGILSRLPGIGPRSAERLALHLVQSDVSEVKQLAQILVEARERIQTC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICG++ PC+IC D++RD +I +VE D+ ++E+S + YHVLGG +SPL+ + Sbjct: 59 PICGSLTEQTPCSICSDERRDGGLICLVERPTDIISIEKSGTFHGRYHVLGGKISPLNGV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I L R+ + I+E++ A+ +EG T++Y+ KL ++I+R+A+G+P G Sbjct: 119 GPEDLRISELESRLSQEPIKEIVVALGTDVEGDATSNYLAKKLARPGLRISRIAHGLPAG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S L++ D+ T+ A+ R + Sbjct: 179 SGLEFADELTLTHALAGRREM 199 >gi|254252244|ref|ZP_04945562.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia dolosa AUO158] gi|124894853|gb|EAY68733.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia dolosa AUO158] Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAPICELCSDDERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|262372599|ref|ZP_06065878.1| recombination protein RecR [Acinetobacter junii SH205] gi|262312624|gb|EEY93709.1| recombination protein RecR [Acinetobacter junii SH205] Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + E L++ L +P GP+SA+R LHL+ K + L+ A+ + + C IC Sbjct: 1 MFSERFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALSYALHEASSHIHECRICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC +RD++++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTENEICDICASTERDSNLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L++R+ +I E+I A +AT+EGQ TAHY+++ K + + +TR+A G+P G EL+ Sbjct: 121 IGIPYLVQRLSEGQIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|254510299|ref|ZP_05122366.1| recombination protein RecR [Rhodobacteraceae bacterium KLH11] gi|221534010|gb|EEE36998.1| recombination protein RecR [Rhodobacteraceae bacterium KLH11] Length = 197 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 102/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +I+NLI ++A++PG GPRSARRA LHL++K+ LL PL++AM + C CGN Sbjct: 3 SNSDIDNLIDLMAKLPGLGPRSARRAVLHLIRKRALLLTPLSDAMQQVAVTARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC + R + VVEDVADLWA+ER+ YHVLGG+LS LD +GP+++ Sbjct: 63 VGTTDICDICNSEARATGELCVVEDVADLWAMERAGIFKGRYHVLGGTLSALDGVGPDEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L +R+ + I E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLKDRVVAEGITEVILALNATVDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R L Sbjct: 182 LDDGTITAALRARKEL 197 >gi|262370489|ref|ZP_06063815.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046] gi|262314831|gb|EEY95872.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046] Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 126/197 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + L++ L +P GP+SA+R LHL+ K + LA A+ + + CS+C Sbjct: 1 MFSDRFDQLVQALRILPSVGPKSAQRMALHLIMKNREGAVGLAHALNEATSYIHECSLCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C ICI +RD ++ VVE AD+ A+E+S + YHVLGG LSPLD +GPE+ Sbjct: 61 SLTENEVCDICISHERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGVGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI LI+R+ K+ E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+ Sbjct: 121 IGIPYLIQRLGDGKVTEVILATNATVEGQATAHYLVEATKHLPIQMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|238762942|ref|ZP_04623910.1| hypothetical protein ykris0001_32540 [Yersinia kristensenii ATCC 33638] gi|238698953|gb|EEP91702.1| hypothetical protein ykris0001_32540 [Yersinia kristensenii ATCC 33638] Length = 201 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQDHCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEKRLETETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRNPI 199 >gi|149189265|ref|ZP_01867551.1| recombination protein RecR [Vibrio shilonii AK1] gi|148836824|gb|EDL53775.1| recombination protein RecR [Vibrio shilonii AK1] Length = 199 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LA+A+++ ++ C C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLADALSSAMTEIGHCQECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICSNPKRKENGQLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRQGDIGEVILATNPTVEGEATAHYIAELCHEHKVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRQKI 199 >gi|149927018|ref|ZP_01915276.1| recombination protein RecR [Limnobacter sp. MED105] gi|149824239|gb|EDM83459.1| recombination protein RecR [Limnobacter sp. MED105] Length = 211 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 117/193 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + +L++ L R+PG GP+SA+R HL++ Q L E++ ++ CS+C N Sbjct: 14 PLVDLVQALKRLPGVGPKSAQRLAFHLLQNDRQAATALGESLLKAVAEIRHCSMCNNFCH 73 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C+IC D +R+ ++ VVE ADL A+E ++ Y+VL G SPLD + PE + Sbjct: 74 ADVCSICSDTRRNPGLLCVVETPADLAAIEATQTYRGYYYVLMGRASPLDGVRPESLDWP 133 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +R++ +++E+I A + T EG+ TA ++ D+++ + +K++RLA G+P+G EL+Y D Sbjct: 134 KLSQRLDDSEVKEVILATNFTNEGEATAVFLTDRIRRMALKVSRLARGVPIGGELEYTDP 193 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R L Sbjct: 194 STVARALLDRRQL 206 >gi|20139818|sp|Q9PCH1|RECR_XYLFA RecName: Full=Recombination protein recR Length = 198 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP + Sbjct: 61 DFSETKICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+ Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD GT+ A +RT Sbjct: 181 YLDRGTLSHAFGTRTE 196 >gi|296111511|ref|YP_003621893.1| recombination protein RecR [Leuconostoc kimchii IMSNU 11154] gi|295833043|gb|ADG40924.1| recombination protein RecR [Leuconostoc kimchii IMSNU 11154] Length = 201 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + E + ++++ + N + CSICGN Sbjct: 3 YPEPIAKLIDSYTKLPGIGSKTATRLAFYTLGMNEDDVVDFSKSLLSAKNDLTFCSICGN 62 Query: 66 VDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + C IC D RD S + VVE+ D+ A+E ++ + LYHVL G +SPL GPE Sbjct: 63 ITENSMNPCVICQDTSRDQSTVFVVENSRDVMAMENTRDYHGLYHVLNGVISPLAGTGPE 122 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ + ++I E+I + EG+ TA Y+ LK +K+TRLA+G+ +GS+ Sbjct: 123 DINLPSLIRRLSQHQEIDEVIVGTNVNAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D T+ +A++ RT L Sbjct: 183 IDYADQLTLIKAVQGRTEL 201 >gi|120598525|ref|YP_963099.1| recombination protein RecR [Shewanella sp. W3-18-1] gi|146293396|ref|YP_001183820.1| recombination protein RecR [Shewanella putrefaciens CN-32] gi|166221965|sp|A4Y7T8|RECR_SHEPC RecName: Full=Recombination protein recR gi|166221967|sp|A1RIQ0|RECR_SHESW RecName: Full=Recombination protein recR gi|120558618|gb|ABM24545.1| DNA replication and repair protein RecR [Shewanella sp. W3-18-1] gi|145565086|gb|ABP76021.1| recombination protein RecR [Shewanella putrefaciens CN-32] gi|319426699|gb|ADV54773.1| recombination protein RecR [Shewanella putrefaciens 200] Length = 199 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+ Sbjct: 63 YTEETLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLASGDVSELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|237730455|ref|ZP_04560936.1| recombination protein RecR [Citrobacter sp. 30_2] gi|226905994|gb|EEH91912.1| recombination protein RecR [Citrobacter sp. 30_2] Length = 201 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTKAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E ++I ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLESEQINELILATNPTVEGEATANYIAELCMQYGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|283834202|ref|ZP_06353943.1| recombination protein RecR [Citrobacter youngae ATCC 29220] gi|291070355|gb|EFE08464.1| recombination protein RecR [Citrobacter youngae ATCC 29220] Length = 201 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ ++I ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLASEQINELILATNPTVEGEATANYIAELCMQYGVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|167648528|ref|YP_001686191.1| recombination protein RecR [Caulobacter sp. K31] gi|189029356|sp|B0T1T2|RECR_CAUSK RecName: Full=Recombination protein recR gi|167350958|gb|ABZ73693.1| recombination protein RecR [Caulobacter sp. K31] Length = 200 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 98/195 (50%), Positives = 137/195 (70%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +L+++PG GPRS RRA L L+KK++ LL PL A+ + KV CS+CG+ Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLTAALVDAQAKVRTCSVCGS 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +DT+DPCAIC D RD ++ VVE+V LWA+ER + YHVLGG LS LD +GPE + Sbjct: 65 LDTSDPCAICSDAARDNRLLCVVEEVGSLWAMERGGSFKGRYHVLGGLLSALDGVGPEAL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L+ R + ++ E+I A+ AT++GQTTAHY+ D+L V +T LA G+P+G +LD+ Sbjct: 125 RVGELLGRAKGGEVSEVILALPATVDGQTTAHYLADRLAPTGVSVTMLARGVPVGGDLDW 184 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI +A+R+R Sbjct: 185 LDDGTIAQALRARRP 199 >gi|300773416|ref|ZP_07083285.1| recombination protein R [Sphingobacterium spiritivorum ATCC 33861] gi|300759587|gb|EFK56414.1| recombination protein R [Sphingobacterium spiritivorum ATCC 33861] Length = 204 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 119/198 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K ++ + R+PG G ++A R LHL+K+ + + A+ + ++ C Sbjct: 1 MEFSSKLLQQAVDEFGRLPGIGQKTALRLVLHLLKQSDGEVLRFTGALNQLKEQIKYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ D C IC +RD S+I VVED D+ A+E + +YHVLGG +SP+D +GP Sbjct: 61 CFNISDHDICEICSSLKRDKSLICVVEDTRDVMAIENTNQYQGVYHVLGGLISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ I+ L++R+ ++E+I A+SAT+EG TT Y+ KLK D++I+ +A GI G E Sbjct: 121 SDLKIEGLVQRLRSGHVKEVILALSATMEGDTTIFYLYRKLKEFDIQISTIARGIAFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y+D+ T+ +I +R Sbjct: 181 LEYVDEITLGRSIATRVP 198 >gi|15641069|ref|NP_230701.1| recombination protein RecR [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587092|ref|ZP_01676869.1| recombination protein RecR [Vibrio cholerae 2740-80] gi|121726247|ref|ZP_01679537.1| recombination protein RecR [Vibrio cholerae V52] gi|147673522|ref|YP_001216524.1| recombination protein RecR [Vibrio cholerae O395] gi|153217695|ref|ZP_01951376.1| recombination protein RecR [Vibrio cholerae 1587] gi|153824935|ref|ZP_01977602.1| recombination protein RecR [Vibrio cholerae MZO-2] gi|153828163|ref|ZP_01980830.1| recombination protein RecR [Vibrio cholerae 623-39] gi|227081229|ref|YP_002809780.1| recombination protein RecR [Vibrio cholerae M66-2] gi|229505349|ref|ZP_04394859.1| recombination protein RecR [Vibrio cholerae BX 330286] gi|229510981|ref|ZP_04400460.1| recombination protein RecR [Vibrio cholerae B33] gi|229515438|ref|ZP_04404897.1| recombination protein RecR [Vibrio cholerae TMA 21] gi|229518102|ref|ZP_04407546.1| recombination protein RecR [Vibrio cholerae RC9] gi|229523157|ref|ZP_04412564.1| recombination protein RecR [Vibrio cholerae TM 11079-80] gi|229525665|ref|ZP_04415070.1| recombination protein RecR [Vibrio cholerae bv. albensis VL426] gi|229608368|ref|YP_002879016.1| recombination protein RecR [Vibrio cholerae MJ-1236] gi|254848185|ref|ZP_05237535.1| recombination protein recR [Vibrio cholerae MO10] gi|297578660|ref|ZP_06940588.1| recombination protein recR [Vibrio cholerae RC385] gi|298498836|ref|ZP_07008643.1| recombination protein RecR [Vibrio cholerae MAK 757] gi|20139783|sp|Q9KT49|RECR_VIBCH RecName: Full=Recombination protein recR gi|172047407|sp|A5F2N5|RECR_VIBC3 RecName: Full=Recombination protein recR gi|254790797|sp|C3LTV3|RECR_VIBCM RecName: Full=Recombination protein recR gi|9655522|gb|AAF94215.1| recombination protein RecR [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548727|gb|EAX58776.1| recombination protein RecR [Vibrio cholerae 2740-80] gi|121631193|gb|EAX63566.1| recombination protein RecR [Vibrio cholerae V52] gi|124113358|gb|EAY32178.1| recombination protein RecR [Vibrio cholerae 1587] gi|146315405|gb|ABQ19944.1| recombination protein RecR [Vibrio cholerae O395] gi|148876405|gb|EDL74540.1| recombination protein RecR [Vibrio cholerae 623-39] gi|149741447|gb|EDM55477.1| recombination protein RecR [Vibrio cholerae MZO-2] gi|227009117|gb|ACP05329.1| recombination protein RecR [Vibrio cholerae M66-2] gi|227012872|gb|ACP09082.1| recombination protein RecR [Vibrio cholerae O395] gi|229339246|gb|EEO04263.1| recombination protein RecR [Vibrio cholerae bv. albensis VL426] gi|229339520|gb|EEO04535.1| recombination protein RecR [Vibrio cholerae TM 11079-80] gi|229344817|gb|EEO09791.1| recombination protein RecR [Vibrio cholerae RC9] gi|229347207|gb|EEO12167.1| recombination protein RecR [Vibrio cholerae TMA 21] gi|229350946|gb|EEO15887.1| recombination protein RecR [Vibrio cholerae B33] gi|229357572|gb|EEO22489.1| recombination protein RecR [Vibrio cholerae BX 330286] gi|229371023|gb|ACQ61446.1| recombination protein RecR [Vibrio cholerae MJ-1236] gi|254843890|gb|EET22304.1| recombination protein recR [Vibrio cholerae MO10] gi|297536254|gb|EFH75087.1| recombination protein recR [Vibrio cholerae RC385] gi|297543169|gb|EFH79219.1| recombination protein RecR [Vibrio cholerae MAK 757] Length = 200 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP D Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ +L R++ I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ Sbjct: 123 IGLDTLDYRLQRGDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRHKL 199 >gi|6624708|emb|CAB63848.1| recombination protein [Streptococcus pneumoniae] Length = 198 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ ALE + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPIRDQTTILVLEDSRDVAALENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|89069706|ref|ZP_01157042.1| recombination protein RecR [Oceanicola granulosus HTCC2516] gi|89044652|gb|EAR50763.1| recombination protein RecR [Oceanicola granulosus HTCC2516] Length = 197 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 104/194 (53%), Positives = 133/194 (68%), Gaps = 2/194 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K+IE LI ++A++PG GPRSARRA LHL+KK+ LL PLAEAMA + C CGN+ Sbjct: 6 KDIEALIDLMAKLPGLGPRSARRAVLHLIKKRGVLLTPLAEAMARVGANARECLNCGNIG 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 T D C IC +R + VVEDVADLWA+ER+ YHVLGG+LS LD +GP+D+ + Sbjct: 66 TGDVCDICTSNKRATGQVCVVEDVADLWAMERAAVFGGRYHVLGGTLSALDGVGPDDLRL 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L +RI + + E+I A+ ATI+GQTTAHYI D L V +T LA G+P+G ELDYLD Sbjct: 126 PKLKDRIASEHVTEVILALGATIDGQTTAHYIADALD--GVTVTSLAQGVPVGGELDYLD 183 Query: 188 DGTIFEAIRSRTVL 201 DGTI A+ +R L Sbjct: 184 DGTITAALNARKSL 197 >gi|71275383|ref|ZP_00651669.1| RecR protein [Xylella fastidiosa Dixon] gi|71898555|ref|ZP_00680726.1| RecR protein [Xylella fastidiosa Ann-1] gi|170730360|ref|YP_001775793.1| recombination protein RecR [Xylella fastidiosa M12] gi|71163683|gb|EAO13399.1| RecR protein [Xylella fastidiosa Dixon] gi|71731679|gb|EAO33739.1| RecR protein [Xylella fastidiosa Ann-1] gi|167965153|gb|ACA12163.1| recombination protein RecR [Xylella fastidiosa M12] Length = 198 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIGHCTECR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP + Sbjct: 61 DFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+ Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD GT+ A +RT Sbjct: 181 YLDRGTLSHAFGTRTE 196 >gi|295676460|ref|YP_003604984.1| recombination protein RecR [Burkholderia sp. CCGE1002] gi|295436303|gb|ADG15473.1| recombination protein RecR [Burkholderia sp. CCGE1002] Length = 198 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLRHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D++RD S++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDEERDPSLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVKRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|124267718|ref|YP_001021722.1| recombination protein RecR [Methylibium petroleiphilum PM1] gi|171769839|sp|A2SIU8|RECR_METPP RecName: Full=Recombination protein recR gi|124260493|gb|ABM95487.1| DNA replication and repair protein RecR [Methylibium petroleiphilum PM1] Length = 196 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 110/194 (56%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +E+L + L R+PG G +SA+R HL++ + LA A+ V C C Sbjct: 3 ASSTLESLTEALRRLPGVGVKSAQRMAYHLLQHDREGALRLARALEQAVATVRHCERCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C+ C+D R+ + VVE AD A+ERS + + LY VL G LSPLD IG DI Sbjct: 63 FTEAPVCSTCLDPARERRQLCVVETPADQAAVERSGSYHGLYFVLMGRLSPLDGIGVHDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G++ L+ R +++ELI A + T EG+ TAH I LKG +TRLA G+P+GSEL+Y Sbjct: 123 GLEKLLARATDGEVQELIVATNFTAEGEATAHVIAQALKGRGPSVTRLARGVPVGSELEY 182 Query: 186 LDDGTIFEAIRSRT 199 +D GTI A+ R Sbjct: 183 VDLGTIAHALSDRR 196 >gi|325919109|ref|ZP_08181168.1| DNA replication and repair protein RecR [Xanthomonas gardneri ATCC 19865] gi|325550418|gb|EGD21213.1| DNA replication and repair protein RecR [Xanthomonas gardneri ATCC 19865] Length = 198 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI+ +PG G +SA+R H+++++ + LA +AN KV C+ C Sbjct: 1 MSSSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCAQCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + ++ CAIC RD + VVE AD A+E + LY +L G LSPLD IGP + Sbjct: 61 DFTESEICAICASASRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+ Sbjct: 121 LGLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D GT+ A +R+ Sbjct: 181 YVDRGTLSHAFGTRSE 196 >gi|260772462|ref|ZP_05881378.1| recombination protein RecR [Vibrio metschnikovii CIP 69.14] gi|260611601|gb|EEX36804.1| recombination protein RecR [Vibrio metschnikovii CIP 69.14] Length = 203 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 112/196 (57%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LAEA+ +V C+ C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALNQAMVEVGHCAECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP D Sbjct: 63 FTEQEVCDICRNPKRQENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ +L R++ I E+I A + T+EG+ TAHYI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDTLDFRLQKGGISEVILATNPTVEGEATAHYIAELCHEHQVSASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 LVDGTTLSHSLLGRQK 198 >gi|256370923|ref|YP_003108747.1| recombination protein RecR [Acidimicrobium ferrooxidans DSM 10331] gi|256007507|gb|ACU53074.1| recombination protein RecR [Acidimicrobium ferrooxidans DSM 10331] Length = 205 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 1/198 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ LI+ L R+PG GP+SA+R L L+ + LA+ + ++ C Sbjct: 1 MNSLPPTLDALIEELGRLPGIGPKSAQRIALALIVRGPAAAHRLADVLVTATERLGRCDR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + C IC D RD +++VVE D+WA ER++ YHVLGG +SP+D +GP Sbjct: 61 CGALAEGARCPICDDPARDPRIVLVVEGDRDVWAFERARRFRGTYHVLGGVISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I LI R+E + I E++ A S T+EG+TTA Y+ L G V ++RLA G+P+G E Sbjct: 121 DDLAIGRLIARVEAEPIEEVVVATSPTVEGETTATYLARVLAGR-VGVSRLATGVPVGGE 179 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y+D+ T+ A+ R Sbjct: 180 LEYVDELTLARALEGRRP 197 >gi|153001130|ref|YP_001366811.1| recombination protein RecR [Shewanella baltica OS185] gi|160875800|ref|YP_001555116.1| recombination protein RecR [Shewanella baltica OS195] gi|217972948|ref|YP_002357699.1| recombination protein RecR [Shewanella baltica OS223] gi|304409213|ref|ZP_07390834.1| recombination protein RecR [Shewanella baltica OS183] gi|307303216|ref|ZP_07582971.1| recombination protein RecR [Shewanella baltica BA175] gi|166221963|sp|A6WPK9|RECR_SHEB8 RecName: Full=Recombination protein recR gi|189029373|sp|A9L594|RECR_SHEB9 RecName: Full=Recombination protein recR gi|254790782|sp|B8E703|RECR_SHEB2 RecName: Full=Recombination protein recR gi|151365748|gb|ABS08748.1| recombination protein RecR [Shewanella baltica OS185] gi|160861322|gb|ABX49856.1| recombination protein RecR [Shewanella baltica OS195] gi|217498083|gb|ACK46276.1| recombination protein RecR [Shewanella baltica OS223] gi|304353034|gb|EFM17431.1| recombination protein RecR [Shewanella baltica OS183] gi|306913576|gb|EFN43998.1| recombination protein RecR [Shewanella baltica BA175] gi|315267990|gb|ADT94843.1| recombination protein RecR [Shewanella baltica OS678] Length = 199 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+ Sbjct: 63 YTEETLCPICASHKRGTSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|293392501|ref|ZP_06636821.1| recombination protein R [Serratia odorifera DSM 4582] gi|291424903|gb|EFE98112.1| recombination protein R [Serratia odorifera DSM 4582] Length = 201 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLETLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQDICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLEQESISEVILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHAI 199 >gi|123966421|ref|YP_001011502.1| recombination protein RecR [Prochlorococcus marinus str. MIT 9515] gi|171769727|sp|A2BX84|RECR_PROM5 RecName: Full=Recombination protein recR gi|123200787|gb|ABM72395.1| RecR protein [Prochlorococcus marinus str. MIT 9515] Length = 199 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 125/196 (63%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N Sbjct: 4 FTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQSESSIRDFSKALLEAHSNVGHCKKCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + + C IC + +R+ ++I VV + DL ALER++ +YHV+GG +SP+D IGPE + Sbjct: 64 LTSEEECDICRNAERNQNIICVVAETKDLLALERAREFKGVYHVIGGLISPMDSIGPEIL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ +I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 124 EIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLTPF-TKVTRIAYGLPMGSELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 183 VDEVTLARALEGRTNL 198 >gi|28198954|ref|NP_779268.1| recombination protein RecR [Xylella fastidiosa Temecula1] gi|182681663|ref|YP_001829823.1| recombination protein RecR [Xylella fastidiosa M23] gi|32129945|sp|Q87CK8|RECR_XYLFT RecName: Full=Recombination protein recR gi|28057052|gb|AAO28917.1| recombination protein RecR [Xylella fastidiosa Temecula1] gi|182631773|gb|ACB92549.1| recombination protein RecR [Xylella fastidiosa M23] gi|307580099|gb|ADN64068.1| recombination protein RecR [Xylella fastidiosa subsp. fastidiosa GB514] Length = 198 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 116/196 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI +PG G ++A+R H+++++ + LA+ ++ K+ C+ C Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHMLEREREGGQRLADVLSRAIEKIGHCTECR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP + Sbjct: 61 DFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+ Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD GT+ A +RT Sbjct: 181 YLDRGTLSHAFGTRTE 196 >gi|312897407|ref|ZP_07756831.1| recombination protein RecR [Megasphaera micronuciformis F0359] gi|310621468|gb|EFQ05004.1| recombination protein RecR [Megasphaera micronuciformis F0359] Length = 196 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 125/193 (64%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E+L + R+PG G ++AR+ +++++ ++ +A+ ++ CS+C N+ + Sbjct: 4 PLEHLAEQFRRLPGIGIKTARKLAYYMIQQPDEKTEAFIDAVRKAKEQMHFCSVCFNLSS 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 TDPC C D RD SVI+VVE D+ A+ERSK + LYHVL G+LSPLD IGPED+ I+ Sbjct: 64 TDPCTYCTDAHRDHSVIMVVETPQDVAAIERSKDYHGLYHVLHGALSPLDGIGPEDLHIK 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++R+ +++E+I A +EG+ TA Y+ LK VK+TR+A G+PMG ++++ D+ Sbjct: 124 ELLQRLGDTRVQEVIIATDPDVEGEATALYLARLLKTAGVKVTRIARGLPMGGDIEFADE 183 Query: 189 GTIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 184 ATLAGAVANRREM 196 >gi|83313204|ref|YP_423468.1| recombinational DNA repair protein (RecF pathway) [Magnetospirillum magneticum AMB-1] gi|123540568|sp|Q2VZR6|RECR_MAGMM RecName: Full=Recombination protein recR gi|82948045|dbj|BAE52909.1| Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magneticum AMB-1] Length = 197 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 111/195 (56%), Positives = 146/195 (74%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE LI++L+R+PG GPRSARRA L LV+K+E LL PLA+AMA+ +V CS+CG Sbjct: 1 MVGPEIERLIQLLSRLPGLGPRSARRAALRLVEKRESLLVPLAQAMADAAARVRTCSVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N DT DPCAIC D +RD S++ VVEDVA LWA+ER+ + Y VLGG LS LD +GPED Sbjct: 61 NFDTIDPCAICADHRRDPSMLCVVEDVAGLWAMERTGSFKGRYAVLGGLLSALDGVGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI+SL+ R I E+I A AT+EGQTTAHY+ ++L +V ++ LA+G+P+G ELD Sbjct: 121 LGIESLVARALDPAITEIILATPATVEGQTTAHYVAERLAPCNVTVSGLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRT 199 +LDDGTI A+R+R Sbjct: 181 HLDDGTITAALRARR 195 >gi|81300178|ref|YP_400386.1| recombination protein RecR [Synechococcus elongatus PCC 7942] gi|81169059|gb|ABB57399.1| DNA replication and repair protein RecR [Synechococcus elongatus PCC 7942] Length = 211 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 126/197 (63%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + LI+ L ++PG GP++A+R LHL+++ E + AEA+ +V C C Sbjct: 15 VYTRPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCF 74 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + D C IC D +RDA I VV D D+ ALE+++ LYHVLGG +SP+D IGPE Sbjct: 75 HLSSEDLCNICRDPKRDAQTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQ 134 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + +Q+L+ R+ ++ +E+I AIS ++EG+TT Y+ LK ++TR+A+G+PMG +L+ Sbjct: 135 LTVQALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQLLKPF-TRVTRIAFGLPMGGDLE 193 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ A+ R L Sbjct: 194 YADEVTLARALEGRRDL 210 >gi|310815373|ref|YP_003963337.1| recombination protein RecR [Ketogulonicigenium vulgare Y25] gi|308754108|gb|ADO42037.1| recombination protein RecR [Ketogulonicigenium vulgare Y25] Length = 196 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 131/195 (67%), Gaps = 2/195 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +I LI ++AR+PG GPRSARRA LHLVKK+ QL+ PL AM + C CGN+ Sbjct: 4 SSDIARLIALMARVPGLGPRSARRAVLHLVKKRSQLMVPLGNAMQAVAQSARECLNCGNI 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T D C IC D R I VVED+ DLWA+ER+ A YHVLGG+LS +D IGPE++ Sbjct: 64 STHDICPICADTARANGQICVVEDIDDLWAMERTGAFKGRYHVLGGTLSAIDAIGPEELR 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I L++R+ + I E+I A+ ATI+GQTTAHYI D L + ++ LA G+P+G ELDYL Sbjct: 124 IPRLVDRVTTENITEVILALGATIDGQTTAHYIADHLS--GIIVSTLAQGVPIGGELDYL 181 Query: 187 DDGTIFEAIRSRTVL 201 DDGTI A+R+R L Sbjct: 182 DDGTIGAALRARRQL 196 >gi|227877634|ref|ZP_03995687.1| recombination protein RecR [Lactobacillus crispatus JV-V01] gi|256844524|ref|ZP_05550010.1| recombination protein RecR [Lactobacillus crispatus 125-2-CHN] gi|256849087|ref|ZP_05554520.1| recombinational DNA repair protein [Lactobacillus crispatus MV-1A-US] gi|262047569|ref|ZP_06020524.1| recombination protein RecR [Lactobacillus crispatus MV-3A-US] gi|293379954|ref|ZP_06626055.1| recombination protein RecR [Lactobacillus crispatus 214-1] gi|312977920|ref|ZP_07789666.1| recombination protein RecR [Lactobacillus crispatus CTV-05] gi|227862782|gb|EEJ70248.1| recombination protein RecR [Lactobacillus crispatus JV-V01] gi|256613602|gb|EEU18805.1| recombination protein RecR [Lactobacillus crispatus 125-2-CHN] gi|256713863|gb|EEU28851.1| recombinational DNA repair protein [Lactobacillus crispatus MV-1A-US] gi|260572145|gb|EEX28710.1| recombination protein RecR [Lactobacillus crispatus MV-3A-US] gi|290923467|gb|EFE00369.1| recombination protein RecR [Lactobacillus crispatus 214-1] gi|310895227|gb|EFQ44295.1| recombination protein RecR [Lactobacillus crispatus CTV-05] Length = 199 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI ++PG G ++A R + + +Q + A+++ + + C ICGN Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPDQDVDDFAKSLVQVKKDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I Sbjct: 63 ITEKDVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ ++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKNDAVKEVILALNSTPEGESTAMYISKLIKSAGIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTAL 199 >gi|198275302|ref|ZP_03207833.1| hypothetical protein BACPLE_01461 [Bacteroides plebeius DSM 17135] gi|198271885|gb|EDY96155.1| hypothetical protein BACPLE_01461 [Bacteroides plebeius DSM 17135] Length = 236 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 124/199 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ + + A++ + +V C Sbjct: 32 MNQQYPSVLLEKAVGEFAKLPGIGRKTAMRLVLHLLRQDTATVEAFSSAISTLKKEVKYC 91 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ TD C IC + RD + + VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 92 KVCHNISDTDVCRICSNPSRDVTTVCVVENIRDVMAVENTQQYRGLYHVLGGVISPMDGI 151 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+SL+ R++ ++E+I A+S+T+EG TT YI KL G DVKIT +A GI +G Sbjct: 152 GPSDLEIESLVNRVKEGTVKEVILALSSTMEGDTTNFYIFRKLVGCDVKITVIARGISIG 211 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL Y D+ T+ +I +R Sbjct: 212 DELQYTDEVTLGRSIVNRV 230 >gi|99080005|ref|YP_612159.1| recombination protein RecR [Ruegeria sp. TM1040] gi|122398457|sp|Q1GKB9|RECR_SILST RecName: Full=Recombination protein recR gi|99036285|gb|ABF62897.1| recombination protein RecR [Ruegeria sp. TM1040] Length = 199 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 106/201 (52%), Positives = 143/201 (71%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +IE LI ++A++PG GPRSARRA LHL++K+ +L PLA+AM+ + C Sbjct: 1 MAAQDNS-DIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETAREC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNV T+D CA+C D+ R + VVEDVADLWA+ER+ YHVLGG+LS LD I Sbjct: 60 LNCGNVGTSDICALCEDETRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L G VK+T LA G+P+G Sbjct: 120 GPEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQLSGR-VKLTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGTI A+R+R + Sbjct: 179 GELDYLDDGTISAALRARKEI 199 >gi|116629041|ref|YP_814213.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus gasseri ATCC 33323] gi|282852747|ref|ZP_06262089.1| recombination protein RecR [Lactobacillus gasseri 224-1] gi|311111163|ref|ZP_07712560.1| recombination protein RecR [Lactobacillus gasseri MV-22] gi|122273961|sp|Q045U7|RECR_LACGA RecName: Full=Recombination protein recR gi|116094623|gb|ABJ59775.1| DNA replication and repair protein RecR [Lactobacillus gasseri ATCC 33323] gi|282556489|gb|EFB62109.1| recombination protein RecR [Lactobacillus gasseri 224-1] gi|311066317|gb|EFQ46657.1| recombination protein RecR [Lactobacillus gasseri MV-22] Length = 199 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + E + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLIQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|259415556|ref|ZP_05739477.1| recombination protein RecR [Silicibacter sp. TrichCH4B] gi|259348786|gb|EEW60548.1| recombination protein RecR [Silicibacter sp. TrichCH4B] Length = 199 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 105/201 (52%), Positives = 143/201 (71%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + +IE LI ++A++PG GPRSARRA LHL++K+ +L PLA+AM + C Sbjct: 1 MAAQDNS-DIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMGRVAETAREC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNV T+D CA+C D+ R + VVEDVADLWA+ER+ YHVLGG+LS LD + Sbjct: 60 LNCGNVGTSDICALCADETRANGELCVVEDVADLWAMERAGVFRGRYHVLGGTLSALDAV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G VK+T LA G+P+G Sbjct: 120 GPEDLRIPRLVDRVATEGVNEVILALNATIDGQTTAHYIADQLEGR-VKLTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGTI A+R+R + Sbjct: 179 GELDYLDDGTISAALRARKEI 199 >gi|87124741|ref|ZP_01080589.1| RecR protein [Synechococcus sp. RS9917] gi|86167620|gb|EAQ68879.1| RecR protein [Synechococcus sp. RS9917] Length = 190 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 74/188 (39%), Positives = 118/188 (62%), Gaps = 2/188 (1%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ R+PG GPR+A+R LHL+++ E+ + AEA+ +V C C ++ C Sbjct: 2 IEQFERLPGIGPRTAQRLALHLLRQPEEQIQSFAEALLAARRQVGQCQTCFHLSAEPTCE 61 Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R S ++ VV D DL ALER++ YHVLGG +SP+D IGPE + + SL++ Sbjct: 62 ICRNPERGTSGLLCVVADSRDLLALERTREYAGRYHVLGGLISPMDGIGPEMLQVSSLVQ 121 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R+E + E+I A++ ++EG TT+ Y+ L+ +++R+AYG+P+GSEL+Y DD T+ Sbjct: 122 RVERESTAEVILALTPSVEGDTTSLYLARLLRPF-TRVSRIAYGLPVGSELEYADDVTLS 180 Query: 193 EAIRSRTV 200 A+ R Sbjct: 181 RALEGRRE 188 >gi|332521184|ref|ZP_08397642.1| recombination protein RecR [Lacinutrix algicola 5H-3-7-4] gi|332043277|gb|EGI79474.1| recombination protein RecR [Lacinutrix algicola 5H-3-7-4] Length = 240 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 127/197 (64%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + K +EN + ++++PG G R+A R LHL+K+ ++ L++A+ ++ + C Sbjct: 35 SMEFSSKLLENAVNEISQLPGIGKRTALRLALHLLKQPKEQTTNLSQAITHMREDLKFCR 94 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C N+ D C IC + R VI VVED+ D+ A+E + + LYHVLGG ++P++ IG Sbjct: 95 SCHNISDVDLCEICANPLRKKDVICVVEDIRDVMAIENTASHKGLYHVLGGKINPIEGIG 154 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P D+ I SLIE+++ I+ELIFA+S T+EG TT YI +L+G++V+ + +A GI +G Sbjct: 155 PHDLNIVSLIEKVKSGNIKELIFALSPTMEGDTTNFYIFKQLQGLEVQTSTIARGISVGD 214 Query: 182 ELDYLDDGTIFEAIRSR 198 EL+Y D+ T+ +I +R Sbjct: 215 ELEYADEVTLGRSILNR 231 >gi|295133092|ref|YP_003583768.1| recombination protein RecR [Zunongwangia profunda SM-A87] gi|294981107|gb|ADF51572.1| recombination protein RecR [Zunongwangia profunda SM-A87] Length = 205 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 122/196 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E + ++++PG G R+A R LHL+++ E L +A++ + ++ C Sbjct: 1 MDFSSKLLEQAVDQMSQLPGIGKRTALRLVLHLLRQPETQTEQLTKALSKLRAEIKRCRN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC + R ++ +VEDV D+ A+E + +YHVLGG +SP+D IGP Sbjct: 61 CYNISDTELCDICANPSRQEDLVCIVEDVRDVMAIENTGQYRGMYHVLGGKISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I+ LIE++ KI+E+IFA+S+T+EG TT YI +L+G VK + +A GI +G E Sbjct: 121 SQLTIKPLIEKVRDGKIQEIIFALSSTMEGDTTNFYIYKQLEGSGVKTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSITNR 196 >gi|126174785|ref|YP_001050934.1| recombination protein RecR [Shewanella baltica OS155] gi|166221962|sp|A3D5Q2|RECR_SHEB5 RecName: Full=Recombination protein recR gi|125997990|gb|ABN62065.1| recombination protein RecR [Shewanella baltica OS155] Length = 199 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + V C C Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+ Sbjct: 63 YTEETLCPICTSHKRGTSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRLPL 199 >gi|24373578|ref|NP_717621.1| recombination protein RecR [Shewanella oneidensis MR-1] gi|38372488|sp|Q8EFF8|RECR_SHEON RecName: Full=Recombination protein recR gi|24347900|gb|AAN55065.1|AE015643_12 recombination protein RecR [Shewanella oneidensis MR-1] Length = 199 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA A+++ + + C C Sbjct: 3 FSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLAAALSSAMSDIGHCQSCRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R +S I VVE AD+ A+E Y VL G LSPLD +GPE+ Sbjct: 63 YTEETLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L + + ELI A + T+EG+ TAH+I D + V I+R+A+G+P+G EL+ Sbjct: 123 LGLALLERHLASGDVAELILATNPTVEGEATAHFIADMARRHKVLISRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R L Sbjct: 183 YVDSTTLALSFNGRIPL 199 >gi|227499704|ref|ZP_03929804.1| recombination protein RecR [Anaerococcus tetradius ATCC 35098] gi|227218171|gb|EEI83434.1| recombination protein RecR [Anaerococcus tetradius ATCC 35098] Length = 201 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + NLI ++P G +SA R + +V + + + A+++ + +++ C I Sbjct: 1 MALYPESLVNLIDEFQKLPTIGRKSAERLAMSIVDRDKDSVDEFAKSLLEVKSRIHSCEI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ D C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D IGP Sbjct: 61 CGNLTEEDICDICKDITRNEECLCIVEDVKNLIAIEKSHAYRGRYHVLGGLISPSDDIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + + L+ERI+ + I+E+I AIS+TIEG+TT+ ++ L +VKIT+LA GIP+GS Sbjct: 121 DKLNVDKLLERIDKEDIKEVILAISSTIEGETTSLFLTGLLSNKNVKITKLAQGIPVGSN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYFDQLTLERALEDRREI 199 >gi|171058657|ref|YP_001791006.1| recombination protein RecR [Leptothrix cholodnii SP-6] gi|170776102|gb|ACB34241.1| recombination protein RecR [Leptothrix cholodnii SP-6] Length = 198 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 82/198 (41%), Positives = 116/198 (58%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K +G + +L++ L R+PG G +SA+R HL++ + LA A+ KV C Sbjct: 1 MKASSGDALAHLVEALRRLPGVGVKSAQRMAYHLLQHDQPAASQLARALDAAVQKVQHCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C CA C+D QRD + VVE AD A+ER+ + LY VL G LSPLD +G Sbjct: 61 RCHTFTEQPVCATCLDPQRDPHQLCVVETPADQAAVERTGSYRGLYFVLMGKLSPLDGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 DIG+ +LIER + ++E+I A + T EG+ TAH I + LK +++TRLA G+P+GS Sbjct: 121 AHDIGLPALIERAFDEVVQEVIVATNFTAEGEVTAHVIAEALKSRGLRVTRLARGVPIGS 180 Query: 182 ELDYLDDGTIFEAIRSRT 199 EL+Y+D GTI A R Sbjct: 181 ELEYVDLGTIAHAFSERR 198 >gi|33861653|ref|NP_893214.1| RecR protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|73621508|sp|Q7V0Z7|RECR_PROMP RecName: Full=Recombination protein recR gi|33634230|emb|CAE19556.1| RecR protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 199 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + LI + PG GPR+A+R L ++K+ E + ++A+ ++ V C C N Sbjct: 4 FTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESSIRDFSKALLEAHSNVGHCKKCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + + C IC + +R+ +I VV + DL ALERS+ YHV+GG +SP+D I PE + Sbjct: 64 LTSEEECEICRNTERNQKIICVVAETKDLLALERSREFKGTYHVIGGLISPMDSISPELL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+SL+ER+ I E+I A++ ++EG TT+ YI L K+TR+AYG+PMGSEL+Y Sbjct: 124 EIRSLVERVSKSDIDEIILALTPSVEGDTTSLYIGKLLTPF-TKVTRIAYGLPMGSELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ RT L Sbjct: 183 VDEVTLARALEGRTNL 198 >gi|229529853|ref|ZP_04419243.1| recombination protein RecR [Vibrio cholerae 12129(1)] gi|229333627|gb|EEN99113.1| recombination protein RecR [Vibrio cholerae 12129(1)] Length = 200 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP D Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLLGRHKL 199 >gi|148977689|ref|ZP_01814250.1| recombination protein RecR [Vibrionales bacterium SWAT-3] gi|145963057|gb|EDK28326.1| recombination protein RecR [Vibrionales bacterium SWAT-3] Length = 199 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCNECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEDTCHICTNPKRQENGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + +V +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRHKI 199 >gi|262375229|ref|ZP_06068462.1| recombination protein RecR [Acinetobacter lwoffii SH145] gi|262309483|gb|EEY90613.1| recombination protein RecR [Acinetobacter lwoffii SH145] Length = 198 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 124/197 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + L++ L +P GP+SA+R LH++ K + LA A+ N + CS+C Sbjct: 1 MFSDRFDQLVQALRILPSVGPKSAQRMALHMIMKNREGAIGLAHALTEATNYIHECSVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ + C IC RD ++ VVE AD+ A+E+S + YHVLGG LSPLD IGPE+ Sbjct: 61 SLTEDEVCNICTSLDRDDELLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L+ R+ +++E+I A +AT+EGQ TAHY+++ K + +++TR+A G+P G EL+ Sbjct: 121 IGIPYLLHRLANGQVKEVILATNATVEGQATAHYLVEASKHLPIQMTRIAQGVPQGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+ +R + Sbjct: 181 YVDSHTLSQAVHNRMRM 197 >gi|262277953|ref|ZP_06055746.1| recombination protein RecR [alpha proteobacterium HIMB114] gi|262225056|gb|EEY75515.1| recombination protein RecR [alpha proteobacterium HIMB114] Length = 205 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 92/202 (45%), Positives = 135/202 (66%), Gaps = 3/202 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K T ++NLI +++R+PG GP+SARR LHL K KE L+ PLA+ + + K+ C I Sbjct: 1 MKFTEPVLDNLISLISRLPGLGPKSARRIALHLFKNKENLMKPLADTLGIAHEKILRCKI 60 Query: 63 CGNVDT-TDPCAI--CIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CG + + C I C + +VE++AD+WA+E + YH+LGG+LS L+ Sbjct: 61 CGAIKSVDANCTISKCEYIDNSYDQLCIVENIADMWAMEATNIYKGHYHILGGTLSALNG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 PE + I SLI+R++ ++E+I A SATIEGQTTAHYI D LK +++KIT+LA+G+P+ Sbjct: 121 SDPESLLIGSLIDRVKKNNVKEVIIATSATIEGQTTAHYINDSLKNLNIKITKLAHGLPV 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 GSE++YLDDGT+F A + R + Sbjct: 181 GSEIEYLDDGTLFSAFKYRNSI 202 >gi|167750679|ref|ZP_02422806.1| hypothetical protein EUBSIR_01656 [Eubacterium siraeum DSM 15702] gi|167656358|gb|EDS00488.1| hypothetical protein EUBSIR_01656 [Eubacterium siraeum DSM 15702] gi|291532022|emb|CBK97607.1| recombination protein RecR [Eubacterium siraeum 70/3] gi|291558240|emb|CBL35357.1| recombination protein RecR [Eubacterium siraeum V10Sc8a] Length = 198 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + + + A++PG G ++A+R +++ E+ + A + + LC Sbjct: 1 MA-EYNSQPLITAAQEFAKLPGIGLKTAQRLAYYILNAPEEEVEQFASGILRARRSMKLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N+ TD C IC D +R+ VI VVE D+ A+ERS + +YHVL G LSP++ I Sbjct: 60 SVCQNICNTDKCDICSDSRRNHKVICVVESPKDVSAIERSGGFDGVYHVLHGLLSPMNSI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + I+ L+ R+ E+I A S TIEG+ TA Y+ +K + VK+TRLAYG+P G Sbjct: 120 GPQQLKIKELMARLSDTD--EVIMATSPTIEGEATATYLSRMIKQLGVKVTRLAYGLPAG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 + L+Y DD T+ A+ +R + Sbjct: 178 ASLEYADDVTLQRALENRNEI 198 >gi|71900521|ref|ZP_00682650.1| RecR protein [Xylella fastidiosa Ann-1] gi|71729697|gb|EAO31799.1| RecR protein [Xylella fastidiosa Ann-1] Length = 198 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 115/196 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ +E LI +PG G ++A+R H+++++ + LA+ + K+ C+ C Sbjct: 1 MSTHLLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLGRAIEKIGHCTECR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T CAIC + RD + VVE D A+E++ LY +L G LSPLD IGP + Sbjct: 61 DFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYRGLYFILQGRLSPLDGIGPHE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +R+ ++ ELI A +AT+EG+TTAHY+ + ++ +RLA G+P+G EL+ Sbjct: 121 LGLDHLGQRLAAGEVTELIIATNATVEGETTAHYLALLARQHGIRPSRLAQGLPLGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD GT+ A +RT Sbjct: 181 YLDRGTLSHAFGTRTE 196 >gi|315037612|ref|YP_004031180.1| recombination protein RecR [Lactobacillus amylovorus GRL 1112] gi|312275745|gb|ADQ58385.1| recombination protein RecR [Lactobacillus amylovorus GRL 1112] gi|327182906|gb|AEA31353.1| recombination protein RecR [Lactobacillus amylovorus GRL 1118] Length = 199 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI ++PG G ++A R + + ++ + A A+ + + C ICGN Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFARALIQVKKDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC + RD + I+VVE D+ + E + LYHVL G LSP+D IGPE+I Sbjct: 63 ITEKDICDICSNPNRDQTTIMVVEQPKDVMSFEEMGEYSGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKHDEVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTTL 199 >gi|301794653|emb|CBW37104.1| recombination protein RecR [Streptococcus pneumoniae INV104] Length = 198 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPTRDQTTILVLEDSRDVATMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I ++SL+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|227506002|ref|ZP_03936051.1| recombination protein RecR [Corynebacterium striatum ATCC 6940] gi|227197284|gb|EEI77332.1| recombination protein RecR [Corynebacterium striatum ATCC 6940] Length = 218 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 122/215 (56%), Gaps = 21/215 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R H++ + + L A+ + + V C IC Sbjct: 1 MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHVLHMDPEDVDRLQNALGAVRDGVTFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC++ QRDAS I VVE+ D+ +ER+ N YHVLGG+L PL +GP+D Sbjct: 61 NISREEVCRICVNSQRDASTICVVEEPKDIQVIERTGEYNGRYHVLGGALDPLANVGPKD 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++RI +I+E+I A EG+ TA Y++ L+ Sbjct: 121 LNISALLQRIGGVLPDRELADSTPDAPLYDTTPEIKEVILATDPNTEGEATAAYLVRLLR 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 D+KITRLA G+P+G +L+++D+ T+ A+ R Sbjct: 181 DFPDLKITRLASGMPLGGDLEFVDELTLSRALSGR 215 >gi|255264134|ref|ZP_05343476.1| recombination protein RecR [Thalassiobium sp. R2A62] gi|255106469|gb|EET49143.1| recombination protein RecR [Thalassiobium sp. R2A62] Length = 197 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 104/198 (52%), Positives = 140/198 (70%), Gaps = 2/198 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K+I++LI+++A++PG GPRSARRA LHL+KK+ L PLA+ M + C Sbjct: 1 MRDATKDIDDLIEMMAKLPGLGPRSARRAVLHLIKKRSLLFTPLADTMQTVAATARECLN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGNV TTD C+IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP Sbjct: 61 CGNVGTTDICSICESEKRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I LI RI+ ++I E+I A++ATI+GQTTAHYI D+L + +T LA G+P+G E Sbjct: 121 DELRIPKLITRIQTEEITEVILALNATIDGQTTAHYIADQL--PTITVTSLAQGVPIGGE 178 Query: 183 LDYLDDGTIFEAIRSRTV 200 LDYLDDGTI A+R+R Sbjct: 179 LDYLDDGTITAALRARKT 196 >gi|254418095|ref|ZP_05031819.1| recombination protein RecR [Brevundimonas sp. BAL3] gi|196184272|gb|EDX79248.1| recombination protein RecR [Brevundimonas sp. BAL3] Length = 205 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 106/200 (53%), Positives = 140/200 (70%), Gaps = 5/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +LA++PG GPRSARRA L L+K++EQLL PLA ++A KV CS+CG Sbjct: 5 AGPEIERLISLLAKLPGLGPRSARRAALALLKRREQLLVPLAASLAETAEKVVSCSVCGA 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 DT DPCAIC D RD +I VVE+ LWA+ERS A YHVLGG LS LD +GPE + Sbjct: 65 PDTRDPCAICSDGSRDNGLICVVEEAGALWAMERSGAFRGKYHVLGGLLSALDGVGPEHL 124 Query: 126 GIQSLIERIEVKKI-----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I L+ R+ + RE++ A+ AT++GQTTAHY+ +++ G DV++T LA G+P+G Sbjct: 125 RIAELVGRVRHQNEGGGAVREVVLALPATVDGQTTAHYVAERISGPDVQVTSLARGVPVG 184 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELD+LDDGTI +A+R+R Sbjct: 185 GELDWLDDGTIVQAMRARRP 204 >gi|157375985|ref|YP_001474585.1| recombination protein RecR [Shewanella sediminis HAW-EB3] gi|189029376|sp|A8FX84|RECR_SHESH RecName: Full=Recombination protein recR gi|157318359|gb|ABV37457.1| recombination protein RecR [Shewanella sediminis HAW-EB3] Length = 199 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ LI+ L +PG GP+SA+R L+++ + LA+A+A+ + V C C Sbjct: 3 FSPLVDELIQSLKCLPGVGPKSAQRMAFQLLERDRKAGQTLAQALASAMSDVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC +R S I VVE AD+ A+E + Y VL G LSPLD +GPE+ Sbjct: 63 FTEESHCPICASNKRGQSEQICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L E + + ELI A + T+EG TAH+I D K +V ++R+A+G+P+G EL+ Sbjct: 123 LGLSLLEEHLCSGGVSELILATNPTVEGDATAHFIADMAKVHNVSVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ + R + Sbjct: 183 YVDSTTLALSFNGRLPI 199 >gi|237746946|ref|ZP_04577426.1| recombinational DNA repair protein [Oxalobacter formigenes HOxBLS] gi|229378297|gb|EEO28388.1| recombinational DNA repair protein [Oxalobacter formigenes HOxBLS] Length = 198 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 112/192 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++NLI+ L +PG GP+SA+R H+++ L+ A+++ + C+ C Sbjct: 6 SLQNLIQALRHLPGIGPKSAQRIAYHMLQHDRDGAAKLSLALSDAIANIRHCARCNTFSE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C +C D +RDAS++ V E AD +E++ Y VL GSLSPLD IGP++I Sbjct: 66 EEICEMCRDNERDASLLCVTETPADQIMIEQTLTFKGYYFVLMGSLSPLDGIGPKEICFD 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI R ++E++ A S EG+ TAHYI + LK ++++RLA G+P+G+EL+Y+D Sbjct: 126 KLIRRATDGVVQEVVLATSFNNEGEATAHYISEMLKARGLRVSRLARGVPVGAELEYVDI 185 Query: 189 GTIFEAIRSRTV 200 GTI A R Sbjct: 186 GTIARAFLDRKT 197 >gi|119356989|ref|YP_911633.1| recombination protein RecR [Chlorobium phaeobacteroides DSM 266] gi|166221930|sp|A1BFN2|RECR_CHLPD RecName: Full=Recombination protein recR gi|119354338|gb|ABL65209.1| recombination protein RecR [Chlorobium phaeobacteroides DSM 266] Length = 205 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 126/205 (61%), Gaps = 6/205 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T IE LI AR+PG G ++A+R +H++ + LA+A+ ++ ++V CS Sbjct: 1 MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSE 60 Query: 63 CGNVDTTD--PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C NV D PC +C RD +VI VVE DL A E++ LYHVL G +SPLD I Sbjct: 61 CQNVTDRDSDPCVLCRSSGRDRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKI----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 GP+DI ++ L+ R+ + RE++ A++ T+EG+TT+ YI LK + + ++++A G Sbjct: 121 GPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIARG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 IP+G+EL+++D+ T+ A+ R+ + Sbjct: 181 IPVGAELEFIDEATLSRAMEGRSAM 205 >gi|146282185|ref|YP_001172338.1| recombination protein RecR [Pseudomonas stutzeri A1501] gi|166221957|sp|A4VKJ5|RECR_PSEU5 RecName: Full=Recombination protein recR gi|145570390|gb|ABP79496.1| recombination protein RecR [Pseudomonas stutzeri A1501] Length = 199 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTRAMEGVGYCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEDELCPQCADPRRDDSLLCVVQSPVDVFAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ R+ E+I A + T+EG+ TAHYI L + I+R+A+G+P+G ELD Sbjct: 122 GIPELLGRVADGAFSEVILATNPTVEGEATAHYIAQMLIPKGLTISRIAHGVPLGGELDL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRKPI 197 >gi|238791474|ref|ZP_04635112.1| hypothetical protein yinte0001_26260 [Yersinia intermedia ATCC 29909] gi|238729090|gb|EEQ20606.1| hypothetical protein yinte0001_26260 [Yersinia intermedia ATCC 29909] Length = 201 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQDRCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEKRLETETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRNPI 199 >gi|160900333|ref|YP_001565915.1| recombination protein RecR [Delftia acidovorans SPH-1] gi|160365917|gb|ABX37530.1| recombination protein RecR [Delftia acidovorans SPH-1] Length = 196 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 82/192 (42%), Positives = 117/192 (60%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ LI+ L R+PG G +SA+R HL+++ + LA A+ V C C Sbjct: 5 QSLDGLIEALRRLPGVGIKSAQRMAFHLLQRDQDGARQLARALTTAVESVTHCERCHTFT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C+IC D+ RDA+ + VVE AD+ A+ER+ A Y+VL G LSPLD IGP D+ + Sbjct: 65 EGRICSICQDEGRDAARLCVVEAPADMAAMERTGAYQGYYYVLMGRLSPLDGIGPRDLNL 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ER K++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D Sbjct: 125 SSLLERAGDGKVQEVILATSFTAEGEATAHAISEALKARGIHVTRLARGVPIGSELEYVD 184 Query: 188 DGTIFEAIRSRT 199 GTI A+ R Sbjct: 185 LGTIAHALVDRR 196 >gi|296157767|ref|ZP_06840601.1| recombination protein RecR [Burkholderia sp. Ch1-1] gi|295892013|gb|EFG71797.1| recombination protein RecR [Burkholderia sp. Ch1-1] Length = 198 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGHSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|56476072|ref|YP_157661.1| recombination protein RecR [Aromatoleum aromaticum EbN1] gi|73621456|sp|Q5P7F1|RECR_AZOSE RecName: Full=Recombination protein recR gi|56312115|emb|CAI06760.1| DNA repair DNA recombination zinc-finger protein [Aromatoleum aromaticum EbN1] Length = 197 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 117/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ ++ LI L +PG GP+SA+R HL+++ ++ LA A+ N + C C Sbjct: 1 MSPSSLDELIDALRGLPGVGPKSAQRMAYHLLQRDQRGAERLARALGNALAVLRHCERCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 T+ C C QRDAS++ VVE ADL +E++ A N LY+VL G LSPLD IGP + Sbjct: 61 TFTETEICQRCASPQRDASLLCVVEMPADLAVIEQTHAYNGLYYVLMGRLSPLDGIGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L+ R+ ++E+I A + T EG+ TAH + + L ++++RL+ G+P+G EL+ Sbjct: 121 LKFDKLLARVADSTVQEVILATNFTNEGEATAHIVAELLAARGIRVSRLSRGVPVGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 + D GTI +A+ R L Sbjct: 181 HTDTGTIAQALVERRPL 197 >gi|227888767|ref|ZP_04006572.1| recombination protein RecR [Lactobacillus johnsonii ATCC 33200] gi|227850604|gb|EEJ60690.1| recombination protein RecR [Lactobacillus johnsonii ATCC 33200] Length = 199 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + EQ + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLIQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC DQ RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDQNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +I+E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEIKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|167855376|ref|ZP_02478143.1| recombination protein RecR [Haemophilus parasuis 29755] gi|167853524|gb|EDS24771.1| recombination protein RecR [Haemophilus parasuis 29755] Length = 201 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +ENL++ L +PG GP+SA+R HL+++ LA+A++ + C C Sbjct: 3 SSPLLENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + + VVE AD+ A+E++ + Y VL G LSPLD IGP + Sbjct: 63 FTEEDECAICQNYRRQISGQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPRE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + +E+I A ++TIEG TA+YI + ++K+TR+A+GIP+GSEL+ Sbjct: 123 IGLDLLQKRLEEESFQEVILATNSTIEGDATANYIAEMCSIHNIKVTRIAHGIPVGSELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D ++ + R + Sbjct: 183 MVDGTSLSHSFVGRRDI 199 >gi|262402601|ref|ZP_06079162.1| recombination protein RecR [Vibrio sp. RC586] gi|262351383|gb|EEZ00516.1| recombination protein RecR [Vibrio sp. RC586] Length = 195 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 113/193 (58%), Gaps = 1/193 (0%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRTFTEQ 61 Query: 70 DPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ Sbjct: 62 DICHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D Sbjct: 122 TLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDG 181 Query: 189 GTIFEAIRSRTVL 201 T+ ++ R L Sbjct: 182 TTLSHSLLGRHKL 194 >gi|327480434|gb|AEA83744.1| recombination protein RecR [Pseudomonas stutzeri DSM 4166] Length = 199 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTRAMEGVGYCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VV+ D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEDELCPQCADPRRDDSLLCVVQSPVDVFAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ R+ E+I A + T+EG+ TAHYI L + I+R+A+G+P+G ELD Sbjct: 122 GIPELLGRVAGGAFSEVILATNPTVEGEATAHYIAQMLIPKGLTISRIAHGVPLGGELDL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRKPI 197 >gi|149278408|ref|ZP_01884545.1| recombination protein [Pedobacter sp. BAL39] gi|149230778|gb|EDM36160.1| recombination protein [Pedobacter sp. BAL39] Length = 205 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 117/198 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E+ + +R+PG G ++A R LHL+ K+++ + + + ++ CS Sbjct: 1 MNFSSKLLEDAVNEFSRLPGVGQKTALRLVLHLLGKEQEEVTNFGNTIIRLRQEIKHCST 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC +R+ +I VVED D+ A+E + +YHVLGG +SP+D +GP Sbjct: 61 CHNISDQEICEICASSKRNKEIICVVEDTRDVMAVENTSQYFGVYHVLGGLISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ I SL++R+ ++E+I A+SAT+EG TT Y+ +LK + IT +A GI G E Sbjct: 121 SDLYIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ +I +R Sbjct: 181 LEYADEITLGRSIVTRVP 198 >gi|218779846|ref|YP_002431164.1| recombination protein RecR [Desulfatibacillum alkenivorans AK-01] gi|226738997|sp|B8FG16|RECR_DESAA RecName: Full=Recombination protein recR gi|218761230|gb|ACL03696.1| recombination protein RecR [Desulfatibacillum alkenivorans AK-01] Length = 199 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 126/199 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + NLIK L+++PG G ++A R LH+++ + LAE+++ V LCS+ Sbjct: 1 MSFYPPSLVNLIKQLSKLPGIGEKTAERLALHILRGSVKDAQALAESISEAKETVRLCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + +DPC IC D RD V+ VVE D+ ALE+S A YHVL G LSP++ +GP Sbjct: 61 CYGLADSDPCHICRDATRDQDVVCVVEQGTDMVALEKSGAFKGRYHVLQGCLSPMNGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I+ L+ER++ +KI+E++ A ++EG++TA+Y+ L+G VKITR+A G+P+G + Sbjct: 121 DNLRIRELVERLKKEKIKEVVVATGTSVEGESTANYLRQVLEGSGVKITRIASGVPIGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L Y D T+ A+ SR L Sbjct: 181 LKYTDALTLKRALDSRHCL 199 >gi|268318941|ref|YP_003292597.1| Recombination protein recR [Lactobacillus johnsonii FI9785] gi|262397316|emb|CAX66330.1| Recombination protein recR [Lactobacillus johnsonii FI9785] Length = 199 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + EQ + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC DQ RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDQNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|289209014|ref|YP_003461080.1| recombination protein RecR [Thioalkalivibrio sp. K90mix] gi|288944645|gb|ADC72344.1| recombination protein RecR [Thioalkalivibrio sp. K90mix] Length = 196 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 114/192 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 E++ L++ L +PG G +SARR LHL+++ LA A+ +V C +C + T Sbjct: 4 ELDELVQALRCLPGVGAKSARRMALHLLERDRDGARRLARAVDQAVERVGHCQVCRTLTT 63 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C+ C D +RD VI VVE D+ A+E + +HVL G LSPLD IGPE++G+ Sbjct: 64 AEVCSRCADPERDPGVICVVESPGDVMAIESATDFTGRFHVLLGRLSPLDGIGPEELGLD 123 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R++ +RELI A + ++EG+ TAHY+ + ++ TR+A GIP G EL+Y+D Sbjct: 124 RLEARLQEDSVRELILATNTSVEGEVTAHYLAEMAARHGIRATRIAQGIPTGGELEYIDA 183 Query: 189 GTIFEAIRSRTV 200 GT+ A+ R Sbjct: 184 GTLAHALSGRRE 195 >gi|221233209|ref|YP_002515645.1| recombination protein RecR [Caulobacter crescentus NA1000] gi|21263936|sp|Q9ABF8|RECR_CAUCR RecName: Full=Recombination protein recR gi|254790757|sp|B8GYE0|RECR_CAUCN RecName: Full=Recombination protein recR gi|220962381|gb|ACL93737.1| Recombination protein recR [Caulobacter crescentus NA1000] Length = 200 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 135/195 (69%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +L+++PG GPRS RRA L L+KK++ LL PLA AMA KV C CG+ Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLATAMAEAQAKVRTCGTCGS 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +D TDPCA+C D RD ++ VVE+V +WA+ER + YHVLGG LS LD IGPE + Sbjct: 65 LDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHVLGGLLSALDGIGPEAL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R+ + E+I A+ AT++GQTTAHYI D+L +V +T LA G+P+G +LD+ Sbjct: 125 RIGELVGRVADGSVAEVILALPATVDGQTTAHYIADRLAKTNVPVTMLARGVPVGGDLDW 184 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI +A+R+R Sbjct: 185 LDDGTIAQALRARRP 199 >gi|113955202|ref|YP_730250.1| recombination protein RecR [Synechococcus sp. CC9311] gi|123327873|sp|Q0IBC2|RECR_SYNS3 RecName: Full=Recombination protein recR gi|113882553|gb|ABI47511.1| recombination protein RecR [Synechococcus sp. CC9311] Length = 189 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 73/186 (39%), Positives = 117/186 (62%), Gaps = 1/186 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I R+PG GPR+A+R LHL+++ E+ + A+A+ ++V C C ++ C Sbjct: 2 IDQFERLPGIGPRTAQRLALHLLRQPEEQIHSFADALLAARSQVGQCQTCFHLSAEPTCE 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC + +R ++ VV D DL ALER++ YHVLGG +SP+D IGPE + I +L++R Sbjct: 62 ICRNPERSIGMLCVVADSRDLLALERTREYAGRYHVLGGLISPMDGIGPEMLQISNLVKR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + +I E+I A++ ++EG TT+ Y+ LK +++R+AYG+P+GSEL+Y DD T+ Sbjct: 122 VAADEINEVILALTPSVEGDTTSLYLARLLKPF-TEVSRIAYGLPVGSELEYADDVTLSR 180 Query: 194 AIRSRT 199 A+ R Sbjct: 181 ALEGRR 186 >gi|300362309|ref|ZP_07058485.1| recombination protein R [Lactobacillus gasseri JV-V03] gi|300353300|gb|EFJ69172.1| recombination protein R [Lactobacillus gasseri JV-V03] Length = 199 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + E + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|110637455|ref|YP_677662.1| recombination protein RecR [Cytophaga hutchinsonii ATCC 33406] gi|122966886|sp|Q11W94|RECR_CYTH3 RecName: Full=Recombination protein recR gi|110280136|gb|ABG58322.1| recombination protein [Cytophaga hutchinsonii ATCC 33406] Length = 205 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 1/198 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K +E+ + ++++PG G ++A R LHL+KK+ + LA A+ N + C Sbjct: 1 MNFPSKLLEDAVLEISKLPGIGKKTALRLVLHLLKKESKESESLANALLNARENIRYCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + CAIC +RD V+ +VED+ D+ A+E + +YHV+GG +SP++RIGP Sbjct: 61 CHTISDHELCAICTSNKRDKRVVCIVEDIRDVLAIENTNQYFGVYHVIGGVISPMERIGP 120 Query: 123 EDIGIQSLIER-IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 + + I SLIER I +I+E+I +S T+EG TTA +I KLK +KI+ +A GIP G Sbjct: 121 DQLNINSLIERVITDTEIKEIILGLSPTMEGDTTAFFITKKLKSYPIKISTIARGIPFGG 180 Query: 182 ELDYLDDGTIFEAIRSRT 199 EL+Y+D+ T+ +I +RT Sbjct: 181 ELEYMDEVTLGRSIATRT 198 >gi|307565357|ref|ZP_07627850.1| recombination protein RecR [Prevotella amnii CRIS 21A-A] gi|307346026|gb|EFN91370.1| recombination protein RecR [Prevotella amnii CRIS 21A-A] Length = 202 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 125/199 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ +E + ++ PG G ++A R LHL+++ + + A+ + + + C Sbjct: 1 MQEFHSLLLEKAVNEFSQFPGIGRKTALRLVLHLLRQSTSRVDEFSNAITLMKHNIKSCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ TD C IC D RD S++ VVE++ D+ A+E ++ + LYHVLGG +SP+D +G Sbjct: 61 VCHNISDTDLCPICSDIHRDKSIVCVVENIQDVMAIENTQQFSGLYHVLGGIISPMDGVG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P DI I SL+ER+ I+E+IFA+++T+EG TT YI K+K ++K++ +A GI +G Sbjct: 121 PNDIEIDSLVERVRSGSIKEVIFALASTMEGDTTNFYISRKIKNFNIKLSVIARGISVGD 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 ELEYTDEVTLGRSIVNRTP 199 >gi|6634593|emb|CAB64486.1| recombination protein [Streptococcus pneumoniae] Length = 198 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+ICID RD + I+V+ED D+ +E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICIDPSRDQTTILVLEDSRDVAVMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +++L+ R+ ++ E+I A +AT +G+ T+ Y+ LK +K+TRLA G+ +G++++ Sbjct: 122 INLKTLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ AI +RT L Sbjct: 182 YADEVTLLRAIENRTEL 198 >gi|152980835|ref|YP_001354018.1| recombination protein RecR [Janthinobacterium sp. Marseille] gi|172049091|sp|A6T0H1|RECR_JANMA RecName: Full=Recombination protein recR gi|151280912|gb|ABR89322.1| Recombinational DNA repair protein (RecF pathway) [Janthinobacterium sp. Marseille] Length = 198 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 114/195 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L + L R+PG GP+SA+R HL++ L A++ KV C++C Sbjct: 3 TPSSLDFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVEKVQHCAMCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C C+D +R+ +++ VVE D +E++ LY VL G LSPLD IGP+DI Sbjct: 63 FTEHEVCETCLDAERNPALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ LI R ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y Sbjct: 123 HLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182 Query: 186 LDDGTIFEAIRSRTV 200 +D GTI A+ R Sbjct: 183 VDAGTIARAMLDRRT 197 >gi|184154761|ref|YP_001843101.1| recombination protein RecR [Lactobacillus fermentum IFO 3956] gi|227514028|ref|ZP_03944077.1| recombination protein RecR [Lactobacillus fermentum ATCC 14931] gi|260663210|ref|ZP_05864102.1| recombination protein RecR [Lactobacillus fermentum 28-3-CHN] gi|229890154|sp|B2GAD9|RECR_LACF3 RecName: Full=Recombination protein recR gi|183226105|dbj|BAG26621.1| recombination protein RecR [Lactobacillus fermentum IFO 3956] gi|227087614|gb|EEI22926.1| recombination protein RecR [Lactobacillus fermentum ATCC 14931] gi|260552402|gb|EEX25453.1| recombination protein RecR [Lactobacillus fermentum 28-3-CHN] Length = 199 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 127/197 (64%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G +SA R + + + + A+++ + + CS+CGN Sbjct: 3 YPEPIARLIDSYMKLPGIGEKSATRLAFYTLGMSDADVDNFAKSLRAVKRDLHYCSVCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S ++VVE D+ A+ER K + LYHVL G++SP + GP+DI Sbjct: 63 ITEDDPCPICKDKTRDQSRVLVVERSRDIMAMERMKEYHGLYHVLHGTISPSEGTGPQDI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 ++SL++R+E K+I+E+I A +A+++G+TTA Y+ +K +K+TRLA+G+ G+++D Sbjct: 123 NLESLLKRLEAHKEIQEVIVATNASLDGETTAQYLAHLIKPAGIKVTRLAHGLSAGADID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F A++ RT + Sbjct: 183 YTDEVTLFRAVQGRTEM 199 >gi|238783569|ref|ZP_04627590.1| hypothetical protein yberc0001_13510 [Yersinia bercovieri ATCC 43970] gi|238715447|gb|EEQ07438.1| hypothetical protein yberc0001_13510 [Yersinia bercovieri ATCC 43970] Length = 201 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQERCTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEKRLESETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|254463454|ref|ZP_05076870.1| recombination protein RecR [Rhodobacterales bacterium HTCC2083] gi|206680043|gb|EDZ44530.1| recombination protein RecR [Rhodobacteraceae bacterium HTCC2083] Length = 197 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 100/196 (51%), Positives = 138/196 (70%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + K+I+ LI+++A++PG GPRSARRA LHL++K+ LL PLA+++ + C CGN Sbjct: 3 STKDIDALIEMMAKLPGLGPRSARRAVLHLIRKRSLLLTPLADSLQTVAATARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V T D C IC +R ++ VVEDV+DLWA+ERS YHVLGG+LS LD IGP+++ Sbjct: 63 VGTADICDICESVKRANGILCVVEDVSDLWAMERSGVFKGRYHVLGGTLSALDAIGPDEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI+R+ + I E+I A++ATI+GQTTAHYI D L+ V +T LA G+P+G ELDY Sbjct: 123 RIPRLIDRVTSEHITEVILALNATIDGQTTAHYIADLLENR-VTLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+ +R + Sbjct: 182 LDDGTITAAMNARKPI 197 >gi|163744804|ref|ZP_02152164.1| recombination protein RecR [Oceanibulbus indolifex HEL-45] gi|161381622|gb|EDQ06031.1| recombination protein RecR [Oceanibulbus indolifex HEL-45] Length = 197 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 102/196 (52%), Positives = 144/196 (73%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++I+ LI+++A++PG GPRSARRA LHL++K+ LL PL++ M + C CGN Sbjct: 3 STRDIDALIELMAKLPGLGPRSARRAVLHLIRKRALLLTPLSDLMQTVAVTARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ Sbjct: 63 VGTTDVCDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++RI+ +++ E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLVDRIDTEEVTEVILALNATIDGQTTAHYIADQLEGR-VRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+++R L Sbjct: 182 LDDGTITAAMQARKSL 197 >gi|300780023|ref|ZP_07089879.1| recombination protein R [Corynebacterium genitalium ATCC 33030] gi|300534133|gb|EFK55192.1| recombination protein R [Corynebacterium genitalium ATCC 33030] Length = 211 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 14/211 (6%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R HL+K + + L A+ + + V C IC Sbjct: 1 MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLKTDPEDIDRLRAALGAVRDGVTFCRICS 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C +C D RDA +I VVED D+ +ER+ YHVLGG+L PL +GP+D Sbjct: 61 NVSREEVCRVCADSGRDAGLICVVEDAKDIQVIERTGEYTGRYHVLGGALDPLANVGPKD 120 Query: 125 IGIQSLIERI-------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKI 170 + I SL++RI + +I E+I A EG+ TA Y+ LK + + Sbjct: 121 LSISSLLQRIGGVLPDRDPDDADSIPEIHEVILATDPDTEGEATASYLARLLKDFPELTV 180 Query: 171 TRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +RLA G+P+G +L+++D+ T+ A+ R L Sbjct: 181 SRLASGMPLGGDLEFVDELTLSRALSGRLTL 211 >gi|239815315|ref|YP_002944225.1| recombination protein RecR [Variovorax paradoxus S110] gi|239801892|gb|ACS18959.1| recombination protein RecR [Variovorax paradoxus S110] Length = 196 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 80/191 (41%), Positives = 110/191 (57%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ L+ L R+PG G +SA R HL++ + LA A+ V C C Sbjct: 6 SLDALVDALRRLPGVGVKSASRMAFHLLQHDREGAQLLARALQQAAGNVRHCERCNTFTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C++C+D +RDAS + VVE AD ALER+ A Y VL G LSPLD IGP+DIG+Q Sbjct: 66 APVCSVCLDARRDASKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPKDIGLQ 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +R + E+I A + T EG+ TAH I + L+ + +TRLA G+P GSEL+Y+D Sbjct: 126 KLFDRALDGTVSEVILATNFTAEGEATAHVIGEALRQRGLNVTRLARGVPAGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALVDRR 196 >gi|123443299|ref|YP_001007273.1| recombination protein RecR [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160793|ref|YP_004297370.1| recombination protein RecR [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223510|sp|A1JNB5|RECR_YERE8 RecName: Full=Recombination protein recR gi|122090260|emb|CAL13126.1| recombination protein RecR [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604679|emb|CBY26177.1| recombination protein RecR [Yersinia enterocolitica subsp. palearctica Y11] gi|325665023|gb|ADZ41667.1| recombination protein RecR [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863112|emb|CBX73242.1| recombination protein recR [Yersinia enterocolitica W22703] Length = 201 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQEHCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEKRLETETISEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRNPI 199 >gi|42518520|ref|NP_964450.1| recombination protein RecR [Lactobacillus johnsonii NCC 533] gi|73621493|sp|Q74KZ9|RECR_LACJO RecName: Full=Recombination protein recR gi|41582805|gb|AAS08416.1| recombination protein RecR [Lactobacillus johnsonii NCC 533] Length = 199 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + EQ + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDSNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|149185874|ref|ZP_01864189.1| recombinational DNA repair protein [Erythrobacter sp. SD-21] gi|148830435|gb|EDL48871.1| recombinational DNA repair protein [Erythrobacter sp. SD-21] Length = 198 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 107/197 (54%), Positives = 143/197 (72%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +EIE L LAR+PG GPRSARRA L LVK++E L L EA+A + + C CG Sbjct: 1 MASQEIETLASALARLPGLGPRSARRAVLWLVKRRESALPALLEALATVGEALVECETCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDTT+PC IC D +RD + VVEDVADLWAL+R+K YHVLGG LS LD I PED Sbjct: 61 NVDTTNPCGICADPRRDGKGLCVVEDVADLWALDRAKLFTGKYHVLGGKLSALDGIRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL+ R+E + E++ A++AT+EGQTTAHY+ ++L+ V+IT+LA+G+P+G ELD Sbjct: 121 LNIASLLSRVEEGGVDEVVLAMNATLEGQTTAHYLAERLEDFPVRITQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLD+GT+ +A+R+R L Sbjct: 181 YLDEGTLAQALRARRPL 197 >gi|312869737|ref|ZP_07729884.1| recombination protein RecR [Lactobacillus oris PB013-T2-3] gi|311094786|gb|EFQ53083.1| recombination protein RecR [Lactobacillus oris PB013-T2-3] Length = 199 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN Sbjct: 3 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLGMQEDDVTNFAKSLLSAKRDLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE D+ ALER + LYHVL G +SP+ GPEDI Sbjct: 63 ITEDDPCPICRDKTRDQSQILVVEQSQDIMALERMHEYHGLYHVLHGVISPVAGTGPEDI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R++ + +E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D Sbjct: 123 NIASLLKRLQKNEEVKEVIIATNASSDGELTAGYLAKLIKPAQIKVTRLAHGLSVGADID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 183 YADEMTLFKAVQGRTEM 199 >gi|91783457|ref|YP_558663.1| recombination protein RecR [Burkholderia xenovorans LB400] gi|123358829|sp|Q13Z78|RECR_BURXL RecName: Full=Recombination protein recR gi|91687411|gb|ABE30611.1| RecR protein [Burkholderia xenovorans LB400] Length = 198 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|159043201|ref|YP_001531995.1| recombination protein RecR [Dinoroseobacter shibae DFL 12] gi|189029360|sp|A8LQA8|RECR_DINSH RecName: Full=Recombination protein recR gi|157910961|gb|ABV92394.1| recombination protein RecR [Dinoroseobacter shibae DFL 12] Length = 199 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 101/198 (51%), Positives = 131/198 (66%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K+IE LI ++AR+PG GPRSARRA L L+ K +LL PL EAM + C Sbjct: 1 MSTAPKDIETLIDLMARLPGLGPRSARRAVLFLLGKNRRLLAPLGEAMTAVAQTARDCLN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ T+D C IC ++R I VVEDVADLWA+ER+ YHVLGG+LS LD +GP Sbjct: 61 CGNIGTSDICDICTSEKRATGEICVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E++ I L +R + E+I A+ AT++GQTTAHYI + L+G V +T LA G+P+G E Sbjct: 121 EELRIPKLRDRAVSEGATEIILALGATVDGQTTAHYIAEALEGTGVAVTSLAQGVPIGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 LDYLDDGTI A+R+R Sbjct: 181 LDYLDDGTITAALRARKS 198 >gi|254427941|ref|ZP_05041648.1| recombination protein RecR [Alcanivorax sp. DG881] gi|196194110|gb|EDX89069.1| recombination protein RecR [Alcanivorax sp. DG881] Length = 200 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 110/193 (56%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ LI +PG GPRSA+R L+ + + L +A+ + V C C N Sbjct: 5 PLVDQLINAFTCLPGVGPRSAQRMAYALLDRGRESGRRLGDALHAAMDGVQHCQRCRNYA 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C +C D +RDAS++ +V D+ A E+S Y VL G LSPLD +GP ++G+ Sbjct: 65 EAELCPVCDDPRRDASLVCIVATPGDVLAFEQSGEYRGQYFVLMGELSPLDGVGPRELGL 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L +R+ +I ELI A T+EG+ TAHY++D + V ++R+A G+PMG EL+++D Sbjct: 125 DVLEQRLNEGQISELILATGTTVEGEATAHYVLDLAQDAGVGVSRIAQGVPMGGELEFVD 184 Query: 188 DGTIFEAIRSRTV 200 T+ +A+R R Sbjct: 185 GATLAQALRGRRP 197 >gi|259502693|ref|ZP_05745595.1| recombination protein R [Lactobacillus antri DSM 16041] gi|259169338|gb|EEW53833.1| recombination protein R [Lactobacillus antri DSM 16041] Length = 199 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI+ ++PG G ++A R + + +E + A+++ + + CSICGN Sbjct: 3 YPEPLAKLIESYTKLPGIGQKTATRLAFYTLGMQEDDVTNFAKSLLSAKRDLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D+ RD S I+VVE D+ ALER + LYHVL G +SP+ GPEDI Sbjct: 63 ITEDDPCPICRDKTRDQSQILVVEQSQDIMALERMHEYHGLYHVLNGVISPVAGTGPEDI 122 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I SL++R++ + ++E+I A +A+ +G+ TA Y+ +K +K+TRLA+G+ +G+++D Sbjct: 123 NIASLLKRLQKNEAVKEVIIATNASSDGELTAGYLAKLIKPAQIKVTRLAHGLSVGADID 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+F+A++ RT + Sbjct: 183 YADEMTLFKAVQGRTEM 199 >gi|227536698|ref|ZP_03966747.1| recombination protein RecR [Sphingobacterium spiritivorum ATCC 33300] gi|227243499|gb|EEI93514.1| recombination protein RecR [Sphingobacterium spiritivorum ATCC 33300] Length = 204 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 118/198 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K ++ + R+PG G ++A R LHL+K+ + + A+ + ++ C Sbjct: 1 MEFSSKLLQQAVDEFGRLPGIGQKTALRLVLHLLKQSDGEVLRFTGALNQLKEQIKYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ D C C +RD S+I VVED D+ A+E + +YHVLGG +SP+D +GP Sbjct: 61 CFNISDHDICETCSSLKRDKSLICVVEDTRDVMAIENTNQYQGVYHVLGGLISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ I+ L++R+ ++E+I A+SAT+EG TT Y+ KLK D++I+ +A GI G E Sbjct: 121 SDLKIEGLVQRLRAGHVKEVILALSATMEGDTTIFYLYRKLKEFDIQISTIARGIAFGGE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y+D+ T+ +I +R Sbjct: 181 LEYVDEITLGRSIATRVP 198 >gi|237784774|ref|YP_002905479.1| recombination protein RecR [Corynebacterium kroppenstedtii DSM 44385] gi|237757686|gb|ACR16936.1| recombination protein [Corynebacterium kroppenstedtii DSM 44385] Length = 218 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R HL+ + L A+ ++ + + C ICG Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHLLHTDPDDIDRLRAALTSVRDGITFCRICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC D RDA+ I V+E+ D+ +E + YHVLGG+L PL +GP+D Sbjct: 61 NISRNDVCRICADPNRDATTICVIEEPKDIEVIEATGEYQGRYHVLGGALDPLANVGPKD 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I L++RI + I+E+I A EG+ T+ Y+ LK Sbjct: 121 LSITQLLQRIAGVLPDRETADSTPDEPRYEDAPTIKEVIIATDPNTEGEATSSYLARLLK 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+ +RLA G+P+G +L+Y+D+ T+ A+ R L Sbjct: 181 DFPDLTTSRLASGMPIGGDLEYVDELTLSRALAGRLPL 218 >gi|329908504|ref|ZP_08274878.1| Recombination protein RecR [Oxalobacteraceae bacterium IMCC9480] gi|327546695|gb|EGF31647.1| Recombination protein RecR [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 109/195 (55%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L + L R+PG GP+SA+R HL++ L A+ ++V CS C Sbjct: 3 TPSSLEFLTETLRRLPGVGPKSAQRIAYHLMQHDRDGAEQLGRALLQAVDRVQHCSRCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C C+D +RDA+++ VVE D +E++ Y VL G LSPLD IGP+DI Sbjct: 63 FTEHLVCETCLDPERDATLLCVVETPGDQLMIEQTLTYKGFYFVLMGRLSPLDGIGPKDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + LI R + E++ A + T EG+ TAHYI + +K + ++RLA G+P+G EL+Y Sbjct: 123 HLDKLILRASDGIVAEVVLATNFTNEGEATAHYISETMKARGLSVSRLARGVPVGGELEY 182 Query: 186 LDDGTIFEAIRSRTV 200 +D GTI A+ R Sbjct: 183 VDAGTIARAMLDRRT 197 >gi|291613734|ref|YP_003523891.1| recombination protein RecR [Sideroxydans lithotrophicus ES-1] gi|291583846|gb|ADE11504.1| recombination protein RecR [Sideroxydans lithotrophicus ES-1] Length = 199 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 117/195 (60%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E LIK L +PG GP+SA+R HL+++ Q LA ++ + V CS C N Sbjct: 3 TPSSLEELIKALRCLPGVGPKSAQRMAYHLLQRDRQGALHLARSLDQAVSSVRHCSKCNN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C +C Q+R+ ++ VVE ADL +E+++ +Y VL G LSPLD +G +D+ Sbjct: 63 FSEEDVCPMCRSQRRETDMLCVVEMPADLLMMEQAQCYRGMYFVLMGRLSPLDGLGAKDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L++R E+I A + TIEG+ TAHY+ L+ +K++R+A G+P+G EL++ Sbjct: 123 PLERLLKRARELSC-EVILATNFTIEGEATAHYLATLLRAQGLKVSRIARGLPVGGELEH 181 Query: 186 LDDGTIFEAIRSRTV 200 +D GT+ +A+ R Sbjct: 182 VDSGTLAQAVLERRT 196 >gi|328946986|ref|YP_004364323.1| Recombination protein recR [Treponema succinifaciens DSM 2489] gi|328447310|gb|AEB13026.1| Recombination protein recR [Treponema succinifaciens DSM 2489] Length = 195 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 112/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ L + +R+PG G +SA R HL+K + + ++ ++ CSICG Sbjct: 3 ALDELTESFSRLPGIGKKSAARIASHLLKTDSSFNIRFSNQILSLQERIKPCSICGAWTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC IC D RD +++ VVE D+ +E S + L+HVLGG +SPL+ I P+ + I Sbjct: 63 EDPCPICSDIARDKTILCVVEQPQDVATIESSHEFHGLFHVLGGVISPLEGITPDKLRIS 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ER+++ I+E+I A + T+EG TTA +I L+ V +TRLA G+P G +L+Y D Sbjct: 123 QLLERVKLGVIKEVIIATNPTVEGDTTALFIQRVLQDTQVVVTRLASGLPAGGDLEYADR 182 Query: 189 GTIFEAIRSRTVL 201 T+ + + R + Sbjct: 183 LTLARSFQGRVKI 195 >gi|296118024|ref|ZP_06836606.1| recombination protein RecR [Corynebacterium ammoniagenes DSM 20306] gi|295968910|gb|EFG82153.1| recombination protein RecR [Corynebacterium ammoniagenes DSM 20306] Length = 218 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 21/215 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R H++ + + L+ A+ + + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHVLHMDPEDIDRLSSALVAVRDGVTFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ C IC++ QRD I VVE+ D+ +ER+ YHVLGG+L PL IGP+D Sbjct: 61 NISRESVCRICVNSQRDRGTICVVEEPKDIQVIERTGEYQGRYHVLGGALDPLANIGPKD 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I L++RI E + E+I A EG+ TA Y++ L+ Sbjct: 121 LNISQLLQRIGGVLPDRELADSTKENPQYDETPDVTEVILATDPNTEGEATAAYLVRLLR 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 D+KITRLA G+P+G +L+++D+ T+ A++ R Sbjct: 181 DFPDLKITRLASGMPLGGDLEFVDELTLSRALQGR 215 >gi|148653525|ref|YP_001280618.1| recombination protein RecR [Psychrobacter sp. PRwf-1] gi|172048543|sp|A5WG77|RECR_PSYWF RecName: Full=Recombination protein recR gi|148572609|gb|ABQ94668.1| DNA replication and repair protein RecR [Psychrobacter sp. PRwf-1] Length = 195 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 78/195 (40%), Positives = 123/195 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ +NL+K L +PG G ++A+R LHL+ + LA+A+ +++ C C Sbjct: 1 MLTEKFDNLVKQLRVLPGVGQKTAQRMALHLLNGRRGQGSALAQALDIAMHEIIECRQCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C IC+D +RD SV+ VVE AD+ A+E++ Y VLGG LSPLD I +D Sbjct: 61 SFSDDDICPICVDPRRDDSVLCVVETAADVMAIEQAAGYRGRYFVLGGHLSPLDGINADD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R++ + E+I A S T+EGQTTAH+I + ++ K+TR+A GIPMG EL+ Sbjct: 121 LNIDQLVNRVKTAPVDEIILATSTTVEGQTTAHFIAEAVRRHVGKVTRIAQGIPMGGELE 180 Query: 185 YLDDGTIFEAIRSRT 199 YLD T+ +A+++R+ Sbjct: 181 YLDSMTLSQALQNRS 195 >gi|149203325|ref|ZP_01880295.1| recombination protein RecR [Roseovarius sp. TM1035] gi|149143158|gb|EDM31197.1| recombination protein RecR [Roseovarius sp. TM1035] Length = 197 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 103/196 (52%), Positives = 142/196 (72%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + + C+ CGN Sbjct: 3 STRDIDALIDMMARLPGLGPRSARRAVLHLIRKRALLLSPLAKLMQTVADTARECATCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TT+ C IC + +R I VVEDVADLWA+ER +A YHVLGG+LS LD++GPE + Sbjct: 63 IGTTEICDICTNAKRANGQICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDQVGPEVL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L+ R++ + I E+I A++AT+EGQTTAHYI D+L G V +T LA G+P+G ELDY Sbjct: 123 RIPALLARVDSEAITEVILALNATVEGQTTAHYIADQLDGR-VTLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+ +R L Sbjct: 182 LDDGTISAALSARKRL 197 >gi|187923818|ref|YP_001895460.1| recombination protein RecR [Burkholderia phytofirmans PsJN] gi|229890135|sp|B2T3S5|RECR_BURPP RecName: Full=Recombination protein recR gi|187715012|gb|ACD16236.1| recombination protein RecR [Burkholderia phytofirmans PsJN] Length = 198 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ L ++ + C Sbjct: 1 MKQ---PSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R I+E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGVIKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|315497914|ref|YP_004086718.1| recombination protein recr [Asticcacaulis excentricus CB 48] gi|315415926|gb|ADU12567.1| recombination protein RecR [Asticcacaulis excentricus CB 48] Length = 200 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 105/201 (52%), Positives = 139/201 (69%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G EIE L+ +L+++PG GPRSARRA L L+KK+EQLL PL AM + +V C Sbjct: 1 MASG-AGPEIERLMALLSKLPGLGPRSARRAALALLKKREQLLIPLTAAMQDAAERVTSC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICG + T DPCA C D RDA++I VVE+ + LWA+ER A + YHVLGG LS LD + Sbjct: 60 HICGALSTRDPCATCADPTRDAAMICVVEEDSALWAMERVGAFSGRYHVLGGLLSALDGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIP 178 PED+ + L++R+ + EL+ A+ AT+EGQTTAHYI D++K + +V IT LA G+P Sbjct: 120 RPEDLRLSGLMQRVSSGGVEELVMALPATVEGQTTAHYIADRVKPLAPEVTITHLARGVP 179 Query: 179 MGSELDYLDDGTIFEAIRSRT 199 +G ELD+LDDGTI A +SR Sbjct: 180 VGGELDWLDDGTIAHAFKSRR 200 >gi|209694646|ref|YP_002262574.1| recombination protein RecR [Aliivibrio salmonicida LFI1238] gi|226726301|sp|B6EJ44|RECR_ALISL RecName: Full=Recombination protein recR gi|208008597|emb|CAQ78772.1| recombination protein RecR [Aliivibrio salmonicida LFI1238] Length = 200 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ Q LA+A++ +++ CS C Sbjct: 3 TSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSECRT 62 Query: 66 VDTTDPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC++ +R + +VE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEDTCAICLNPKRQMNGELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I+E+I A + T+EG+ TAHYI + + V +R+A+G+PMG EL+ Sbjct: 123 IGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEICQEHHVSASRIAHGVPMGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ +I R L Sbjct: 183 LVDGTTLSHSILGRQKL 199 >gi|197116610|ref|YP_002137037.1| recombination protein RecR [Geobacter bemidjiensis Bem] gi|226726304|sp|B5E9A4|RECR_GEOBB RecName: Full=Recombination protein recR gi|197085970|gb|ACH37241.1| recombination protein RecR [Geobacter bemidjiensis Bem] Length = 197 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 127/196 (64%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L+ L ++PG G +SA+R HL+K + LA+++ + +V LCS+C Sbjct: 4 FSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHPSN-IEALAQSLLQVGERVHLCSVCFA 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC +RD+ I VVE+ DL ALERS+A + YHVL G+LSPL+ + P+D+ Sbjct: 63 ITEDDPCWICS-GERDSGTICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKDL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++RE++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y Sbjct: 122 RIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPVGSDLEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A+ R+ L Sbjct: 182 VDAATVQRAVEGRSEL 197 >gi|238788051|ref|ZP_04631847.1| hypothetical protein yfred0001_15420 [Yersinia frederiksenii ATCC 33641] gi|238723999|gb|EEQ15643.1| hypothetical protein yfred0001_15420 [Yersinia frederiksenii ATCC 33641] Length = 201 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQDRCTICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEKRLETETISEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRNPI 199 >gi|126733478|ref|ZP_01749225.1| recombination protein RecR [Roseobacter sp. CCS2] gi|126716344|gb|EBA13208.1| recombination protein RecR [Roseobacter sp. CCS2] Length = 197 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 104/194 (53%), Positives = 140/194 (72%), Gaps = 2/194 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++++NLI ++A++PG GPRSARRA LHL+KK+ +L PLA+AM + V C CGNV Sbjct: 6 EDLDNLIALMAKLPGLGPRSARRAVLHLIKKRSLVLLPLADAMQRVGATVRECLNCGNVC 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 TTD C IC ++R I VVEDVADLWA+ER++ YHVLGG+LS LD IGP+++ I Sbjct: 66 TTDICDICSTEKRATGQIAVVEDVADLWAMERAQVFKGRYHVLGGTLSALDAIGPDELRI 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 LI+RI+ + + E+I A+ ATI+GQTTAHYI D+L + +T LA G+P+G ELDYLD Sbjct: 126 PKLIDRIKAENVTEVILALGATIDGQTTAHYIADQL--PGITVTSLAQGVPVGGELDYLD 183 Query: 188 DGTIFEAIRSRTVL 201 DGTI A+ +R L Sbjct: 184 DGTITAALNARKAL 197 >gi|124003953|ref|ZP_01688800.1| recombination protein RecR [Microscilla marina ATCC 23134] gi|123990532|gb|EAY30012.1| recombination protein RecR [Microscilla marina ATCC 23134] Length = 200 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 121/196 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K IE+ + +A +PG G ++A R HL+K+ E+ L + + + + C+ C Sbjct: 3 FSSKLIEDAVDQIAGLPGIGKKTALRLVFHLLKQDEKSTVALTDTLLKLRRDIVYCNQCH 62 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++ T C IC +RD +++ VVED D+ A+E + LYHVLGG +SP++ + P D Sbjct: 63 HISDTPTCNICNSNKRDRTLLCVVEDSQDVLAIENTAQYQGLYHVLGGVISPMEGVSPID 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL+ER+ +I+E+IFA+S T+EG TT Y+ KL+ +KI+ +A G+P+GSEL+ Sbjct: 123 LHITSLLERVAKSEIKEVIFALSPTMEGDTTTFYLTKKLREHQIKISTIARGVPIGSELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ +I RT Sbjct: 183 YTDEITLGRSIIGRTT 198 >gi|78066595|ref|YP_369364.1| recombination protein RecR [Burkholderia sp. 383] gi|107028996|ref|YP_626091.1| recombination protein RecR [Burkholderia cenocepacia AU 1054] gi|116689846|ref|YP_835469.1| recombination protein RecR [Burkholderia cenocepacia HI2424] gi|170733185|ref|YP_001765132.1| recombination protein RecR [Burkholderia cenocepacia MC0-3] gi|206560260|ref|YP_002231024.1| recombination protein RecR [Burkholderia cenocepacia J2315] gi|254248059|ref|ZP_04941380.1| Recombination protein RecR [Burkholderia cenocepacia PC184] gi|123179928|sp|Q1BGY7|RECR_BURCA RecName: Full=Recombination protein recR gi|123568319|sp|Q39FP6|RECR_BURS3 RecName: Full=Recombination protein recR gi|171855182|sp|A0K7U9|RECR_BURCH RecName: Full=Recombination protein recR gi|229890131|sp|B1JTA5|RECR_BURCC RecName: Full=Recombination protein recR gi|229890132|sp|B4EAY2|RECR_BURCJ RecName: Full=Recombination protein recR gi|77967340|gb|ABB08720.1| RecR protein [Burkholderia sp. 383] gi|105898160|gb|ABF81118.1| recombination protein RecR [Burkholderia cenocepacia AU 1054] gi|116647935|gb|ABK08576.1| recombination protein RecR [Burkholderia cenocepacia HI2424] gi|124872835|gb|EAY64551.1| Recombination protein RecR [Burkholderia cenocepacia PC184] gi|169816427|gb|ACA91010.1| recombination protein RecR [Burkholderia cenocepacia MC0-3] gi|198036301|emb|CAR52197.1| recombination protein [Burkholderia cenocepacia J2315] Length = 198 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R +HL++ + L ++ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAVHLMQHDREGAERLGRSLLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D++RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRTM 198 >gi|257464254|ref|ZP_05628633.1| recombination protein recR [Fusobacterium sp. D12] gi|317061771|ref|ZP_07926256.1| recombination protein recR [Fusobacterium sp. D12] gi|313687447|gb|EFS24282.1| recombination protein recR [Fusobacterium sp. D12] Length = 197 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 119/196 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K +E LI ++PG G +SA R H++ EQ + +A+ ++ K+ C +CG Sbjct: 1 MAIKSLERLIDQFHKLPGIGRKSATRLGFHILDYSEQEIEDFIQALEDVKGKIKRCPVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC D+ RD I +VED D+ +LE++ LYH+LGG L+PL + P+ Sbjct: 61 DYCEDSLCPICADEARDRRSICIVEDSRDVISLEKTGKYRGLYHILGGKLAPLQGVTPDK 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L+ERI ++I+E+I A++ +EG+TTA Y++ LK D++IT++A GIPMG L+ Sbjct: 121 LNLKPLLERITKEEIQEIILALNPDLEGETTAMYLVKLLKPFDIRITKIASGIPMGGNLE 180 Query: 185 YLDDGTIFEAIRSRTV 200 + D TI A+ +R Sbjct: 181 FADSATIARALDARQE 196 >gi|119485345|ref|ZP_01619673.1| recombination protein RecR [Lyngbya sp. PCC 8106] gi|119457101|gb|EAW38227.1| recombination protein RecR [Lyngbya sp. PCC 8106] Length = 189 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 120/188 (63%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I+ L R+PG GP++A+R ++++K+ E + LA+A+ + +V LC +C ++ C Sbjct: 2 IEQLQRLPGVGPKTAQRLAMYIIKRSETEVEALAQALLDAKKQVGLCKVCFHLSAEPICD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC QRD I VV D D+ A+E+++ YHVLGG +SP+D IGPE + I+ L+ R Sbjct: 62 ICRHPQRDNETICVVSDSRDVIAIEKTREYRGKYHVLGGVISPMDGIGPEQLTIEPLVRR 121 Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 + +++E+I AIS ++EG+TT Y+ +K ++TR+A+G+PMG +L+Y D+ T+ Sbjct: 122 VSQNQVKEVIIAISPSVEGETTTLYLGQLIKPF-TRVTRIAFGLPMGGDLEYADEITLAR 180 Query: 194 AIRSRTVL 201 A+ R L Sbjct: 181 ALEGRREL 188 >gi|93005630|ref|YP_580067.1| recombination protein RecR [Psychrobacter cryohalolentis K5] gi|122415701|sp|Q1QCM0|RECR_PSYCK RecName: Full=Recombination protein recR gi|92393308|gb|ABE74583.1| DNA replication and repair protein RecR [Psychrobacter cryohalolentis K5] Length = 197 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + L+K L +PG G +SA+R LHL+ KK LA+A+ + C C Sbjct: 1 MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C +C D +RD +++ VVE AD+ A+E++ Y VLGG LSP+D I +D Sbjct: 61 SFSDEAVCPLCQDPRRDDTLLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R++ + + ELI A T+EGQTTAH+I + + K+TRLA G+PMG EL+ Sbjct: 121 LNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVSRHVNKVTRLAQGVPMGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLD T+ +A+++R+ L Sbjct: 181 YLDSMTLGQAMQNRSFL 197 >gi|329666791|gb|AEB92739.1| recombination protein RecR [Lactobacillus johnsonii DPC 6026] Length = 199 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + EQ + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEQDVEDFSKSLMQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDSNRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGILSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A++++ EG+ TA Y+ +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|163846113|ref|YP_001634157.1| recombination protein RecR [Chloroflexus aurantiacus J-10-fl] gi|222523849|ref|YP_002568319.1| recombination protein RecR [Chloroflexus sp. Y-400-fl] gi|229890136|sp|A9WEA8|RECR_CHLAA RecName: Full=Recombination protein recR gi|254790759|sp|B9LJ32|RECR_CHLSY RecName: Full=Recombination protein recR gi|163667402|gb|ABY33768.1| recombination protein RecR [Chloroflexus aurantiacus J-10-fl] gi|222447728|gb|ACM51994.1| recombination protein RecR [Chloroflexus sp. Y-400-fl] Length = 204 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 116/193 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ A++PG GP++A R T +L++ + + LA+A+ ++ +V C C N+ Sbjct: 12 PVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQVGYCRRCFNITV 71 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + CAIC+D RD + I VVE+ D+ A+ER+ A LYHVL G ++PL+ I ED+ I+ Sbjct: 72 GELCAICLDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLKIE 131 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ + ++E+I A + EG+ TA ++ L + V++TR A G+P G +L++ D Sbjct: 132 ELLARVRSEPVQEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGGDLEWADP 191 Query: 189 GTIFEAIRSRTVL 201 T+ A R L Sbjct: 192 ETLGSAFEGRREL 204 >gi|332185194|ref|ZP_08386943.1| recombination protein RecR [Sphingomonas sp. S17] gi|332014918|gb|EGI56974.1| recombination protein RecR [Sphingomonas sp. S17] Length = 198 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 105/196 (53%), Positives = 146/196 (74%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EIE L + LARIPG GPRSARRA LHL+KK+E L PL A+A + ++ CS CG Sbjct: 1 MASPEIEALTQALARIPGLGPRSARRAVLHLLKKREAALAPLLSALAAVEERLETCSTCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT +PCAIC D +RD + + +VE+VADLWALERS+ +HVLGG LS LD + PED Sbjct: 61 NIDTANPCAICADPRRDPAALCIVEEVADLWALERSRLFPGRFHVLGGRLSALDGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ RIE I E++ A++AT+EGQTTAHYI ++++ V++T+LA+G+P+G ELD Sbjct: 121 LAIDALVRRIEKGAIDEIVLAMNATLEGQTTAHYIAERIERFPVRVTQLAHGLPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD+GT+ +A+R+R Sbjct: 181 YLDEGTLAQALRARRP 196 >gi|312796077|ref|YP_004028999.1| Recombination protein recR [Burkholderia rhizoxinica HKI 454] gi|312167852|emb|CBW74855.1| Recombination protein recR [Burkholderia rhizoxinica HKI 454] Length = 200 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + LI+ L +PG GP+SA+R HL++ L ++ + + C Sbjct: 1 MNVK-PPSALAALIEALRTLPGVGPKSAQRIAYHLMQHDRDGAQRLGRSLLHATQALKHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C D C +C D+QRD +++ VVE AD LE++ A LY VL G LSPLD I Sbjct: 60 ERCNTFTERDVCELCSDEQRDPTLLCVVETPADQVMLEQTLAYCGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP +I + L+ R + E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPREIHFERLMRRATDGVVSEVVLATNFTNEGEATAHYLGQMLKARGLTVTRLARGVPVG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y+D GTI A+ R Sbjct: 180 GELEYVDAGTIARAVLDRRS 199 >gi|49082740|gb|AAT50770.1| PA1534 [synthetic construct] Length = 199 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ L +PG G +SA+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+ Sbjct: 122 GIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRRPI 197 >gi|291460810|ref|ZP_06600200.1| recombination protein RecR [Oribacterium sp. oral taxon 078 str. F0262] gi|291416583|gb|EFE90302.1| recombination protein RecR [Oribacterium sp. oral taxon 078 str. F0262] Length = 198 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K+I L+ L+R+PG G +SA+R +++ + L+E++ + + C Sbjct: 1 MEYFSKDIARLVTELSRLPGVGVKSAQRLAFYIINSPLEQAEALSESILSAKKNIRYCRE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + ++ C +C ++R+ I+VVE+ D+ A ER+ +YHVL G++SP+ IGP Sbjct: 61 CFTITDSELCPVCASEERNHRQIMVVENPRDMGAYERTGRYRGVYHVLHGAISPMLGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 EDI ++ L++R+ K + E+I A ++++EG+TTA Y+ +K ++++R+A G+P+G + Sbjct: 121 EDIRLKELMQRL-QKPVDEVIIATNSSLEGETTATYLTKLIKPSGIRLSRIASGVPVGGD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 ++ +D+ T+ A+ R +L Sbjct: 180 IENIDEVTLLRALDGRVIL 198 >gi|325911633|ref|ZP_08174041.1| recombination protein RecR [Lactobacillus iners UPII 143-D] gi|325476619|gb|EGC79777.1| recombination protein RecR [Lactobacillus iners UPII 143-D] Length = 199 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDEDVEDFSQALIEAKKQIHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I Sbjct: 63 ITDTDPCEICSNANRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++ Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRISL 199 >gi|28898951|ref|NP_798556.1| recombination protein RecR [Vibrio parahaemolyticus RIMD 2210633] gi|153838680|ref|ZP_01991347.1| recombination protein RecR [Vibrio parahaemolyticus AQ3810] gi|260364435|ref|ZP_05777064.1| recombination protein RecR [Vibrio parahaemolyticus K5030] gi|260878851|ref|ZP_05891206.1| recombination protein RecR [Vibrio parahaemolyticus AN-5034] gi|260896227|ref|ZP_05904723.1| recombination protein RecR [Vibrio parahaemolyticus Peru-466] gi|260900004|ref|ZP_05908399.1| recombination protein RecR [Vibrio parahaemolyticus AQ4037] gi|31076898|sp|Q87MQ4|RECR_VIBPA RecName: Full=Recombination protein recR gi|28807170|dbj|BAC60440.1| recombination protein RecR [Vibrio parahaemolyticus RIMD 2210633] gi|149747900|gb|EDM58772.1| recombination protein RecR [Vibrio parahaemolyticus AQ3810] gi|308088845|gb|EFO38540.1| recombination protein RecR [Vibrio parahaemolyticus Peru-466] gi|308094239|gb|EFO43934.1| recombination protein RecR [Vibrio parahaemolyticus AN-5034] gi|308107412|gb|EFO44952.1| recombination protein RecR [Vibrio parahaemolyticus AQ4037] gi|308114583|gb|EFO52123.1| recombination protein RecR [Vibrio parahaemolyticus K5030] gi|328474509|gb|EGF45314.1| recombination protein RecR [Vibrio parahaemolyticus 10329] Length = 199 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ + LA+A++ ++ C+ C Sbjct: 3 TSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQSMTEIGHCAECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L R+ I E+I A + T+EG+ TAHYI + + V+ +R+A+G+P+G EL+ Sbjct: 123 IGLDVLDYRLRRGDISEVILATNPTVEGEATAHYIAELCREHQVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 LVDGTTLSHSLLGRHKI 199 >gi|238759222|ref|ZP_04620389.1| hypothetical protein yaldo0001_7680 [Yersinia aldovae ATCC 35236] gi|238702509|gb|EEP95059.1| hypothetical protein yaldo0001_7680 [Yersinia aldovae ATCC 35236] Length = 201 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 111/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTQAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ + Y VL G LSP+D IGP D Sbjct: 63 FTEQDRCTICSNPRRQQNGQICVVESPADIHAVEQTGQFSGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG TA+YI +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEERLSTETITEVILATNPTVEGDATANYIGQMCGQYGALASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHPI 199 >gi|189502035|ref|YP_001957752.1| recombination protein RecR [Candidatus Amoebophilus asiaticus 5a2] gi|229485580|sp|B3ES21|RECR_AMOA5 RecName: Full=Recombination protein recR gi|189497476|gb|ACE06023.1| hypothetical protein Aasi_0625 [Candidatus Amoebophilus asiaticus 5a2] Length = 200 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 122/196 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 T K IE I ++ +PG G ++A R L L+K + LA ++ + +++ C Sbjct: 1 MAYTSKLIEEAINEISALPGIGKKTALRLVLFLLKSNPEQTERLATSLHKLRSQIQYCQK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T C+IC + RD +I VVE++ D+ A+E + +YHVLGG +SP++ IGP Sbjct: 61 CHNISDTTLCSICANPHRDTGLICVVENIQDVIAIENTAQYKGIYHVLGGLISPVEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I+ L++R++ ++ +E+IFA+S TIEG TT YI KLK VK++ +A G+ +GSE Sbjct: 121 EQLYIEHLVQRVQQEQPQEIIFALSTTIEGDTTTFYITKKLKEFPVKLSNIARGVAVGSE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I+ R Sbjct: 181 LEYTDEMTLARSIKER 196 >gi|86131773|ref|ZP_01050370.1| recombination protein RecR [Dokdonia donghaensis MED134] gi|85817595|gb|EAQ38769.1| recombination protein RecR [Dokdonia donghaensis MED134] Length = 205 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 126/196 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +EN + ++++PG G R+A R LHL+++ E L EA+ + + + C Sbjct: 1 MEFSSKLLENAVYEMSQLPGVGKRTALRLVLHLLRQPENQTHHLTEALNTMRDTIKFCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC + RDAS++ VVEDV D+ A+E + LYHVLGG +SPLD +GP Sbjct: 61 CHNISDVELCEICSNPNRDASLVCVVEDVRDVMAIENTSQYRGLYHVLGGKISPLDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SLI++ + +++E+IFA+S+T+EG TT YI +L+ D+K + +A GI +G E Sbjct: 121 QDLNIYSLIDKAKSGEVKEVIFALSSTMEGDTTNFYIYRQLEAYDIKTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYADEVTLGRSILHR 196 >gi|319793178|ref|YP_004154818.1| recombination protein recr [Variovorax paradoxus EPS] gi|315595641|gb|ADU36707.1| recombination protein RecR [Variovorax paradoxus EPS] Length = 196 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 78/191 (40%), Positives = 109/191 (57%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ L+ L R+PG G +SA R HL++ L+ A+ V C +C Sbjct: 6 SLDALVDALRRLPGVGVKSASRMAFHLLQHDRDGAQLLSRALQQAAGNVRHCELCNTFTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C++C+D +RD + + VVE AD ALER+ A Y VL G LSPLD IGP+DIG+Q Sbjct: 66 APICSVCMDSRRDGTKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPKDIGLQ 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +R + E+I A + T EG+ TAH I + LK + +TRLA G+P GSEL+Y+D Sbjct: 126 KLFDRALDGTVSEVILATNFTAEGEATAHVIGEALKQRGLTVTRLARGVPAGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALVDRR 196 >gi|319763143|ref|YP_004127080.1| recombination protein recr [Alicycliphilus denitrificans BC] gi|330825206|ref|YP_004388509.1| recombination protein RecR [Alicycliphilus denitrificans K601] gi|317117704|gb|ADV00193.1| recombination protein RecR [Alicycliphilus denitrificans BC] gi|329310578|gb|AEB84993.1| recombination protein RecR [Alicycliphilus denitrificans K601] Length = 196 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 113/191 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C Sbjct: 6 SLDALIQALRRLPGVGVKSAQRMAFHLLQHDRGGAQQLSQALARACEQVRHCERCHTFTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C C+D RDA+ + VVE AD ALER+ A LY VL G LSPLD +GP DIG+ Sbjct: 66 GAVCDTCLDPARDATRLCVVETPADQSALERTAAFKGLYFVLMGRLSPLDGVGPRDIGVH 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ER ++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D Sbjct: 126 KLLERAGDGVVQEVILATSFTAEGEATAHAIAEALKRRGIHVTRLARGVPVGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALADRR 196 >gi|58336716|ref|YP_193301.1| recombination protein RecR [Lactobacillus acidophilus NCFM] gi|227903278|ref|ZP_04021083.1| recombinational DNA repair protein [Lactobacillus acidophilus ATCC 4796] gi|73621492|sp|Q5FM04|RECR_LACAC RecName: Full=Recombination protein recR gi|58254033|gb|AAV42270.1| recombinational DNA repair protein [Lactobacillus acidophilus NCFM] gi|227868907|gb|EEJ76328.1| recombinational DNA repair protein [Lactobacillus acidophilus ATCC 4796] Length = 199 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI ++PG G ++A R + + ++ + ++A+ + + C ICGN Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFSKALIQVKQDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC + RD + I+VVE DL ALE + LYHVL G LSP+D IGPE++ Sbjct: 63 ITEKEICDICSNPNRDQTTIMVVEQPKDLMALEEMGEYDGLYHVLHGVLSPMDGIGPEEV 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++T+ YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKNDDVKEVILALNSTPEGESTSMYISKLIKPAGIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTTL 199 >gi|117925037|ref|YP_865654.1| DNA replication and repair protein RecR [Magnetococcus sp. MC-1] gi|171460778|sp|A0L8F5|RECR_MAGSM RecName: Full=Recombination protein recR gi|117608793|gb|ABK44248.1| DNA replication and repair protein RecR [Magnetococcus sp. MC-1] Length = 200 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 127/197 (64%), Gaps = 2/197 (1%) Query: 5 ITG--KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ +E I++ +R+PG G +SA+R HL+K+ + L + + + ++ C + Sbjct: 1 MSSGLPTLERSIELFSRLPGVGRKSAQRMVYHLLKEGGREATLLGQGLLALSERIHFCEV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ CAIC D +RD +I VVE+ D+ A+ER+ A LYHVLGG LSP+D IGP Sbjct: 61 CHNLAEEGLCAICQDSKRDHGLICVVEEPVDVLAMERAGAYRGLYHVLGGRLSPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + + +L+ER++ +RELI A + T+ G+ TAHYI + + + I+RLAYG+PMG E Sbjct: 121 DALYLDALLERLQQGGVRELIIATNPTVAGEATAHYITQLAQPLTIDISRLAYGMPMGGE 180 Query: 183 LDYLDDGTIFEAIRSRT 199 L+YLD+ T+F+A++ R Sbjct: 181 LEYLDESTLFQALQGRR 197 >gi|325956091|ref|YP_004286701.1| recombination protein RecR [Lactobacillus acidophilus 30SC] gi|325332656|gb|ADZ06564.1| recombination protein RecR [Lactobacillus acidophilus 30SC] Length = 199 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI ++PG G ++A R + + ++ + A A+ + + C ICGN Sbjct: 3 YPLPIAHLIDAYMKLPGIGEKTATRLAFYTMDMPQEDVEDFARALIQVKKDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC + RD + I+VVE D+ + E + LYHVL G LSP+D IGPE+I Sbjct: 63 ITEKDICDICSNPNRDQTTIMVVEQPKDVMSFEEMGEYSGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKHDEVKEVILALNSTSEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTTL 199 >gi|170692335|ref|ZP_02883498.1| recombination protein RecR [Burkholderia graminis C4D1M] gi|170142765|gb|EDT10930.1| recombination protein RecR [Burkholderia graminis C4D1M] Length = 198 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + L++ L +PG GP+SA+R HL++ L A+ + C Sbjct: 1 MKQ---PSALSALVEALRVLPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C+D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 58 EKCNTFTEAQICEVCLDSERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L++R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 118 GPKEIHFDRLVKRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R + Sbjct: 178 GELEYVDAGTIARAMLDRRSM 198 >gi|325479550|gb|EGC82646.1| recombination protein RecR [Anaerococcus prevotii ACS-065-V-Col13] Length = 201 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + NLI+ ++P G +SA R + +V + + ++++ + +++ C I Sbjct: 1 MALFPESLTNLIEQFQKLPTIGRKSAERLAMSIVDDDRKKVEDFSKSLLEVKDRIHKCEI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ D C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D IGP Sbjct: 61 CGNLTEEDICDICKDITRNEEYLCIVEDVRNLIAIEKSNAYRGRYHVLGGLISPSDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I L+ERI+ + I+E+I AIS+TIEG+TT ++ L +DVKIT+LA GIP+GS Sbjct: 121 DELNIDKLLERIKKEDIKEVIIAISSTIEGETTILFLSSILSKLDVKITKLAQGIPVGSN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYFDQLTLERALEDRREI 199 >gi|309790309|ref|ZP_07684876.1| recombination protein RecR [Oscillochloris trichoides DG6] gi|308227643|gb|EFO81304.1| recombination protein RecR [Oscillochloris trichoides DG6] Length = 203 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 117/200 (58%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + I + + LI+ L+++PG GP++A R T L++ +E + LA+A+ + +V C+ Sbjct: 4 ENAIIVEPVARLIEELSKLPGIGPKTASRLTFFLLRAEEGQVQALAQALLAVKEQVRFCT 63 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C N+ C IC D RD S I VVE+ D+ A+ER+ A LYHVL G ++PL+ I Sbjct: 64 RCFNITVAPLCPICQDTNRDQSKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIY 123 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 E + I LI R+ + + E++ A++ EG+ TA ++ L + V++TR A G+P G Sbjct: 124 REHLKIDELITRVRSEPVDEVVLAMNPNTEGEATAFLLLRDLAPLGVRVTRPARGLPTGG 183 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L++ D T+ A++ R L Sbjct: 184 DLEWADPETLGSAMQGRREL 203 >gi|226329025|ref|ZP_03804543.1| hypothetical protein PROPEN_02927 [Proteus penneri ATCC 35198] gi|225202211|gb|EEG84565.1| hypothetical protein PROPEN_02927 [Proteus penneri ATCC 35198] Length = 202 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCCDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEEERCTICANVRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPMD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+ + I E+I A + T+EG+ TA+YI + D+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEERLSQETISEVILATNPTVEGEATANYIAEICAQYDIAASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ +I R Sbjct: 183 MVDGTTLSHSIAGRQK 198 >gi|322834003|ref|YP_004214030.1| recombination protein RecR [Rahnella sp. Y9602] gi|321169204|gb|ADW74903.1| recombination protein RecR [Rahnella sp. Y9602] Length = 201 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+++ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R + VVE AD+ A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEICTICANPRRKENGQVCVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L ER+E + I+E+I A + T+EG+ TA+YI + V +R+A+G+P+G ELD Sbjct: 123 IGLGRLEERLESENIQEVILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELD 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D T+ ++ R Sbjct: 183 MVDGTTLSHSLAGRHP 198 >gi|223983489|ref|ZP_03633675.1| hypothetical protein HOLDEFILI_00955 [Holdemania filiformis DSM 12042] gi|223964661|gb|EEF68987.1| hypothetical protein HOLDEFILI_00955 [Holdemania filiformis DSM 12042] Length = 197 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K E LI+ +PG G ++A R ++ ++ + A+A+ + N + C ICG Sbjct: 1 MYPKSFERLIECFQLLPGVGAKTAERYAFTMLDAPQEQIDLFAQALISCKNDIKRCRICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC ++ R++ +I VV+ D+ A+E+ + +YHVL G +S I PED Sbjct: 61 NISDQDECPICQNEDRNSRMICVVQSPKDVIAMEKMQEYAGVYHVLNGLISTSKGIMPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I +L+ERI + E+I A +ATIEG+TTA Y+ L G V +TR+A+G+PMG LD Sbjct: 121 LNIDALLERI-TPETEEVIIATNATIEGETTALYLDKLLSGKGVLVTRIAHGLPMGGHLD 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +A R L Sbjct: 180 YADELTLIKAFEGRKSL 196 >gi|121594689|ref|YP_986585.1| recombination protein RecR [Acidovorax sp. JS42] gi|171769453|sp|A1W8D4|RECR_ACISJ RecName: Full=Recombination protein recR gi|120606769|gb|ABM42509.1| recombination protein RecR [Acidovorax sp. JS42] Length = 196 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 114/191 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C Sbjct: 6 SLDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGAQVLSQALAQAATQVRHCERCHTFTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C C+D RDA+ + VVE AD A+ER+ A LY VL G LSPLD +GP DIG+ Sbjct: 66 GAVCETCLDPARDATRLCVVETPADQAAMERTAAFKGLYFVLMGRLSPLDGVGPRDIGVH 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L+ER ++E+I A S T EG+ TAH I + LK V +TRLA G+P+GSEL+Y+D Sbjct: 126 NLLERASDGVVQEVILATSFTAEGEATAHAIGEALKRRGVHVTRLARGVPVGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALADRR 196 >gi|298373110|ref|ZP_06983100.1| recombination protein RecR [Bacteroidetes oral taxon 274 str. F0058] gi|298276014|gb|EFI17565.1| recombination protein RecR [Bacteroidetes oral taxon 274 str. F0058] Length = 204 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 1/201 (0%) Query: 1 MQK-KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + K + +ENL+ R+PG G ++A R LHL+K+ E L ++ +V Sbjct: 1 MNEVKYPSELLENLVNEFHRLPGVGRKTALRYALHLLKEDEADAMNLGNSILRFRAEVSK 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C +C N+ D C ICI+ +R+ +I VVE VAD+ A+E + N +YHVLGG +SP++ Sbjct: 61 CRVCNNICDNDLCEICINTKRNHRLICVVESVADVMAVENTAQFNGVYHVLGGVISPMNG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGP D+ I +L++R+ I E+I A+S +EG TT YI KL +++I+ +A G+ + Sbjct: 121 IGPADLDIPALVQRVAEGGIDEVILALSPDMEGDTTCLYIYKKLADYNIEISTIARGVAV 180 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 G+ L+Y D+ T+ +I +R Sbjct: 181 GNSLEYADEITLGRSIVNRIK 201 >gi|15596731|ref|NP_250225.1| recombination protein RecR [Pseudomonas aeruginosa PAO1] gi|107100965|ref|ZP_01364883.1| hypothetical protein PaerPA_01001995 [Pseudomonas aeruginosa PACS2] gi|218892510|ref|YP_002441377.1| recombination protein RecR [Pseudomonas aeruginosa LESB58] gi|254234636|ref|ZP_04927959.1| recombination protein RecR [Pseudomonas aeruginosa C3719] gi|254239882|ref|ZP_04933204.1| recombination protein RecR [Pseudomonas aeruginosa 2192] gi|313106539|ref|ZP_07792767.1| recombination protein RecR [Pseudomonas aeruginosa 39016] gi|20139743|sp|Q9I3H9|RECR_PSEAE RecName: Full=Recombination protein recR gi|226739007|sp|B7UVI8|RECR_PSEA8 RecName: Full=Recombination protein recR gi|9947493|gb|AAG04923.1|AE004582_1 recombination protein RecR [Pseudomonas aeruginosa PAO1] gi|126166567|gb|EAZ52078.1| recombination protein RecR [Pseudomonas aeruginosa C3719] gi|126193260|gb|EAZ57323.1| recombination protein RecR [Pseudomonas aeruginosa 2192] gi|218772736|emb|CAW28521.1| recombination protein RecR [Pseudomonas aeruginosa LESB58] gi|310879269|gb|EFQ37863.1| recombination protein RecR [Pseudomonas aeruginosa 39016] Length = 198 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ L +PG G +SA+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+ Sbjct: 122 GIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRRPI 197 >gi|163732697|ref|ZP_02140142.1| recombination protein RecR [Roseobacter litoralis Och 149] gi|161394057|gb|EDQ18381.1| recombination protein RecR [Roseobacter litoralis Och 149] Length = 197 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 139/195 (71%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + K+I+ LI ++A++PG GPRSARRA LHL++K+ LL PLA+ + + C CGN Sbjct: 3 STKDIDALIDLMAKLPGLGPRSARRAVLHLIRKRSLLLIPLADTLQAVAETARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ Sbjct: 63 VGTTDICDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAVGPQEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + I E+I A++ATI+GQTTAHYI D L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEG-QVRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI A+R+R Sbjct: 182 LDDGTITAAMRARKS 196 >gi|291288273|ref|YP_003505089.1| recombination protein RecR [Denitrovibrio acetiphilus DSM 12809] gi|290885433|gb|ADD69133.1| recombination protein RecR [Denitrovibrio acetiphilus DSM 12809] Length = 197 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 123/195 (63%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + E + L+R+PG G ++A R LH++K + + LAE++ + K C ICG Sbjct: 1 MKNRIFERCVGELSRLPGIGRKTAARLALHILKADSEQVKSLAESLVELKEKTVFCKICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ T+ C IC D R+ S I VVE+ D++ LE + LYHVLGG +SPLD IGPED Sbjct: 61 NMSETEVCHICTDGYRNRSQICVVEEAKDIYVLEATGFFRGLYHVLGGRISPLDGIGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L++R + + + E+I A + IEG+TTA Y+ LK ++K+T++A G+P+G+ L+ Sbjct: 121 LHIEELLKRAKAEDVSEIILATNPDIEGETTAIYLSKLLKKQNLKVTKIASGVPIGTNLE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y D+ T+ +A+ R Sbjct: 181 YTDEITLLKAMEQRK 195 >gi|119945932|ref|YP_943612.1| recombination protein RecR [Psychromonas ingrahamii 37] gi|171769144|sp|A1SWZ8|RECR_PSYIN RecName: Full=Recombination protein recR gi|119864536|gb|ABM04013.1| DNA replication and repair protein RecR [Psychromonas ingrahamii 37] Length = 199 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 115/195 (58%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +E+L++ L +P GP+SA+R HL+ K + L+ + N++ C C Sbjct: 3 SSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC + +R+ + +I VVE D+ A+E++ + Y VL G LSPLD +GPE Sbjct: 63 FTEQNLCAICDNDKRNKNGMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGPEQ 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L +++ + E+I A + T+EG+ TA+YI + K +K++R+A+G+P+G EL+ Sbjct: 123 LGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEMAKRYAIKVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRT 199 Y+D T+ + R+ Sbjct: 183 YVDSTTLSHSFSGRS 197 >gi|152983854|ref|YP_001349153.1| recombination protein RecR [Pseudomonas aeruginosa PA7] gi|166221954|sp|A6V7W8|RECR_PSEA7 RecName: Full=Recombination protein recR gi|150959012|gb|ABR81037.1| recombination protein RecR [Pseudomonas aeruginosa PA7] Length = 198 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ L +PG G +SA+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L RI E+I A + T+EG+ TAHYI L + ++R+A+G+P+G EL+ Sbjct: 122 GIPELDARIRDGAFSEVILATNPTVEGEATAHYIAQLLADRGLTLSRIAHGVPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRRPI 197 >gi|254456022|ref|ZP_05069451.1| recombination protein RecR [Candidatus Pelagibacter sp. HTCC7211] gi|207083024|gb|EDZ60450.1| recombination protein RecR [Candidatus Pelagibacter sp. HTCC7211] Length = 203 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 83/194 (42%), Positives = 129/194 (66%), Gaps = 2/194 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 EIE LIK+++++PG GP+SA+R L L+ +++L+ PLA + +Y V C+ CG++ + Sbjct: 6 EIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPLASTLDQVYKNVTRCNFCGSLKS 65 Query: 69 T-DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C C + + + I VVED+AD W++E S +H+LGG++S + + ED+ I Sbjct: 66 NLSGCINCENSKEKYNKICVVEDIADQWSIENSNIFQGYFHILGGTISSVGQR-KEDLLI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ER+ + I E+I A SAT+EGQTTA+YI D LK K+T+LA G+P+G E++ LD Sbjct: 125 NSLVERVNKEGIEEVILATSATVEGQTTAYYIQDSLKNTSAKVTKLAQGLPVGGEIENLD 184 Query: 188 DGTIFEAIRSRTVL 201 DGT+F A ++R L Sbjct: 185 DGTLFSAFKNRANL 198 >gi|227484860|ref|ZP_03915176.1| recombination protein RecR [Anaerococcus lactolyticus ATCC 51172] gi|227237220|gb|EEI87235.1| recombination protein RecR [Anaerococcus lactolyticus ATCC 51172] Length = 201 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 122/197 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I + + NLI+ ++P G +SA R + +V + + + ++++ + ++ C I Sbjct: 1 MAILPESLNNLIEQFQKLPTIGRKSAERLAMSIVDEDAKSVEDFSKSLIEVKKRIHHCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ D C IC D RD + +VEDV +L A+E+S A YHVLGG +SP D I P Sbjct: 61 CGNLTEEDTCNICKDFTRDDEYLCIVEDVRNLIAIEKSGAYRGKYHVLGGLISPSDDISP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + I LI+R++ + I+E+I AIS+TIEG+TT +I + LKG ++KI+++A GIP+GS Sbjct: 121 DKLNIDKLIKRLDTEDIKEIILAISSTIEGETTILFITNLLKGRNIKISKIAQGIPVGSH 180 Query: 183 LDYLDDGTIFEAIRSRT 199 L+Y D T+ A+ R Sbjct: 181 LEYFDQLTLERALEDRR 197 >gi|104780941|ref|YP_607439.1| recombination protein RecR [Pseudomonas entomophila L48] gi|122403933|sp|Q1ICI0|RECR_PSEE4 RecName: Full=Recombination protein recR gi|95109928|emb|CAK14633.1| recombination protein recR [Pseudomonas entomophila L48] Length = 200 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C C Sbjct: 3 FSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEQELCPQCADPRRDDTQLCVVEGPVDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + TR+A+G+P+G EL+ Sbjct: 122 GIPQLMARIEEQGTFSEVILATNPTVEGEATAHYIAQLLAEKGLTATRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ A R + Sbjct: 182 LVDGGTLAHAFAGRRPI 198 >gi|228469550|ref|ZP_04054543.1| recombination protein RecR [Porphyromonas uenonis 60-3] gi|228308900|gb|EEK17575.1| recombination protein RecR [Porphyromonas uenonis 60-3] Length = 205 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 122/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + + +E + L+ +PG G ++A R LHL+++ L EA+ ++ K+C C Sbjct: 1 MKDQYPSQWLERAVDQLSLLPGIGRKTAMRMALHLLRQPPSYAQHLGEAIIDLRQKICYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + + C IC D QRD S + VVE V D+ +E++ LYHVLGG +SP+D I Sbjct: 61 ERCHCISDSPLCDICSDPQRDQSTVCVVEQVKDVLTIEQTHRYKGLYHVLGGIISPIDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I+SL ER++ + +RE+I AI +T+EG TT +YI +L+ V ++ +A GI +G Sbjct: 121 TPNDLEIESLYERVQEEPVREVILAIRSTLEGDTTNYYIYKRLESTGVLVSLIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ AI +RT Sbjct: 181 DEIEYADEVTLGSAIANRTP 200 >gi|309810105|ref|ZP_07703951.1| recombination protein RecR [Lactobacillus iners SPIN 2503V10-D] gi|308169604|gb|EFO71651.1| recombination protein RecR [Lactobacillus iners SPIN 2503V10-D] Length = 199 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I Sbjct: 63 ITDTDPCEICSNPNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++ Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRISL 199 >gi|257458483|ref|ZP_05623620.1| recombination protein RecR [Treponema vincentii ATCC 35580] gi|257444080|gb|EEV19186.1| recombination protein RecR [Treponema vincentii ATCC 35580] Length = 196 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 1/194 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E+LI L R+PG G +S R H++K++ LA+++ N+++ + C ICG Sbjct: 3 ALEDLIDNLCRLPGIGKKSGARLAYHILKQEPLYAHRLADSLYNLHDSIKPCPICGAFTD 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC D RD S I VVE D++ L L+HVLGG ++PL+ IGPE + I Sbjct: 63 QDVCTICSDPGRDGSCICVVEQPQDVYTLMSMGEYRGLFHVLGGVIAPLEGIGPEQLRIA 122 Query: 129 SLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL++RI ++E+I A + TIEG TTA YI L+ V++TRLA G+P+G +L+Y D Sbjct: 123 SLVKRIGSGTAVKEVILATNPTIEGDTTALYIQKILRDFPVEVTRLASGLPVGGDLEYTD 182 Query: 188 DGTIFEAIRSRTVL 201 T+ + + R + Sbjct: 183 KLTLMRSFKGRIKI 196 >gi|228473616|ref|ZP_04058368.1| recombination protein RecR [Capnocytophaga gingivalis ATCC 33624] gi|228274988|gb|EEK13798.1| recombination protein RecR [Capnocytophaga gingivalis ATCC 33624] Length = 202 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 127/196 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++++PG G R+A R LHL+K+ LA ++ ++ N++ C Sbjct: 1 MDFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPPAQTERLAASLVSLVNEITYCKQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC + RD+S++ VVEDV D+ A+E + N LYHVLGG +SP+D +GP Sbjct: 61 CHNISDTEICDICANIHRDSSLLCVVEDVRDVMAIENTGQYNGLYHVLGGKISPIDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SL+++++ ++E+IFA+S T+EG TT YI +L+G+D+ + +A GI +G E Sbjct: 121 NELTIASLVKKVKEGSVKEIIFALSNTMEGDTTNFYIYRQLEGLDITTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYTDEVTLGRSILHR 196 >gi|332526816|ref|ZP_08402917.1| recombination protein RecR [Rubrivivax benzoatilyticus JA2] gi|332111218|gb|EGJ11250.1| recombination protein RecR [Rubrivivax benzoatilyticus JA2] Length = 195 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 110/195 (56%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI+ L R+PG G +SA+R HL++ LA A+ +V C+ C Sbjct: 1 MADTALDALIEALRRLPGVGQKSAQRVAFHLLQHDRDGARRLAHALDVAAERVHHCARCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C +C D +RD ++ VVE AD ALERS LY VL G LSPLD +G D Sbjct: 61 TFTEDEVCPVCRDPERDGRLLCVVETPADQHALERSGGYRGLYFVLMGRLSPLDGVGAGD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG LIER ++E+I A S T EG+ TAH + L+ +K+TRLA G+P GSE++ Sbjct: 121 IGAAELIERASDGTVQEVILATSFTAEGEVTAHALAQALRARGLKVTRLARGVPAGSEIE 180 Query: 185 YLDDGTIFEAIRSRT 199 Y+D GTI A+ R Sbjct: 181 YVDLGTIAHALVDRR 195 >gi|254488517|ref|ZP_05101722.1| recombination protein RecR [Roseobacter sp. GAI101] gi|214045386|gb|EEB86024.1| recombination protein RecR [Roseobacter sp. GAI101] Length = 197 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 104/196 (53%), Positives = 140/196 (71%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++I+ LI +++R+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN Sbjct: 3 STRDIDALIDLMSRLPGLGPRSARRAVLHLIRKRALLLTPLADVMQTVAATARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ Sbjct: 63 VGTTDICDICTSEKRANGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI+R+ + I E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDY Sbjct: 123 RIPRLIDRVSTENITEVILALNATIDGQTTAHYIADQLDGR-VQLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R + Sbjct: 182 LDDGTITAAMRARKSI 197 >gi|161506950|ref|YP_001576904.1| recombination protein RecR [Lactobacillus helveticus DPC 4571] gi|172048178|sp|A8YTF7|RECR_LACH4 RecName: Full=Recombination protein recR gi|160347939|gb|ABX26613.1| Recombinational DNA repair protein [Lactobacillus helveticus DPC 4571] gi|328462875|gb|EGF34724.1| recombination protein RecR [Lactobacillus helveticus MTCC 5463] Length = 199 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI R+PG G ++A R + + E+ + ++A+ + N + C ICGN Sbjct: 3 YPLPIAHLIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I Sbjct: 63 ITEKEVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI +K ++K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAEIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTAL 199 >gi|331694241|ref|YP_004330480.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190] gi|326948930|gb|AEA22627.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190] Length = 205 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 114/205 (55%), Gaps = 8/205 (3%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L R+PG GP+SA+R HL+ + L E + + V C +C Sbjct: 1 MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADVSRLQEVLQRVKQGVRFCEVCS 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV + C C D +RD +V+ VVE+ D+ A+ER++ YHVLGG+L PL IGP+ Sbjct: 61 NVSENERCRFCTDARRDPTVVCVVEEPKDVLAVERTREFKGRYHVLGGALDPLGGIGPDS 120 Query: 125 IGIQSLIERI-------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYG 176 + I+ L+ R+ + +I E+I A EG+ TA Y++ L+ + ++R A G Sbjct: 121 LKIRELLARLGGTGPASDETEIAEVIIATDPNTEGEATATYLVRLLRDFPGLTVSRPAAG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 +PMG +L++ D+ T+ A+ R L Sbjct: 181 LPMGGDLEFADELTLGRALSGRRAL 205 >gi|322435539|ref|YP_004217751.1| recombination protein RecR [Acidobacterium sp. MP5ACTX9] gi|321163266|gb|ADW68971.1| recombination protein RecR [Acidobacterium sp. MP5ACTX9] Length = 200 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 5/202 (2%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ + + LI L ++PG G ++A+R H+++ + LA+A+ I + LC Sbjct: 1 MTQRFA-EPMARLIDELRKLPGIGTKTAQRLAFHVLRSPGEDADALADAIREIKKHLRLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N+ DPC C + R +I VVE+ ++ +ER+++ N +YHVL G+LSP+ + Sbjct: 60 SVCNNITDVDPCHYCSNPVRSHRLICVVEEPTNIATVERTRSYNGVYHVLHGTLSPIGGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIP 178 GPE + I++L+ R+E E+I A S TIEG+ TA YI +L+ VK+TR+A G+P Sbjct: 120 GPEQLRIRNLLTRLEDVD--EVILATSPTIEGEATAGYIAGELRRVKSGVKVTRIATGVP 177 Query: 179 MGSELDYLDDGTIFEAIRSRTV 200 GS+++Y D+ T+ A+ R Sbjct: 178 AGSDIEYADEVTMTRAMEGRRE 199 >gi|116049478|ref|YP_791719.1| recombination protein RecR [Pseudomonas aeruginosa UCBPP-PA14] gi|296390098|ref|ZP_06879573.1| recombination protein RecR [Pseudomonas aeruginosa PAb1] gi|122258586|sp|Q02K17|RECR_PSEAB RecName: Full=Recombination protein recR gi|115584699|gb|ABJ10714.1| recombination protein RecR [Pseudomonas aeruginosa UCBPP-PA14] Length = 198 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI+ L +PG G +SA+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L RI E+I A + T+EG+ TAHYI L G + ++R+A+G+P+G EL+ Sbjct: 122 GIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLAGRGLTLSRIAHGVPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRRPI 197 >gi|86142320|ref|ZP_01060830.1| recombination protein recR [Leeuwenhoekiella blandensis MED217] gi|85831072|gb|EAQ49529.1| recombination protein recR [Leeuwenhoekiella blandensis MED217] Length = 205 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 126/196 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +E + ++++PG G R+A R LHL+++ E L EA+ + + C Sbjct: 1 MEFSSKLLEQAVYEMSQLPGIGKRTALRLVLHLLQQPEAQTEQLTEALTGLRTGIKFCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T+ C IC + R+++++ VVEDV D+ A+E + YHVLGG +SPLD IGP Sbjct: 61 CHNISDTELCEICANPNRESAIVCVVEDVRDVMAIENTSQYRGHYHVLGGKISPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SLIE+++ I E+IFA+S+T+EG TT YI +L+G++VK + +A GI +G E Sbjct: 121 QDLTIYSLIEKVKSGAIEEIIFALSSTMEGDTTNFYIYRQLEGLNVKTSTIARGIAVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L++ D+ T+ +I +R Sbjct: 181 LEFADEVTLGRSILNR 196 >gi|317506737|ref|ZP_07964519.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974] gi|316254956|gb|EFV14244.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974] Length = 203 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R HLV + + L A+A I + V C ICG Sbjct: 1 MFEGPVQDLIDELSRLPGVGPKSAQRIAFHLVGSPKPEIDRLGSALAKIRDGVQFCDICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D +RD S I VV D+ A+ER++ + YHVLGG+L+PL +GP+ Sbjct: 61 NIAADEICRICKDPRRDLSRICVVSQPKDVVAIERTREFHGRYHVLGGALNPLAGVGPDR 120 Query: 125 IGIQSLIER----IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + ++ L+ R ++ + E+I A EG+ TA Y+ L D+++TRLA G+PM Sbjct: 121 LRVKELLTRLASAVDGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADEMTLGRALAGRRSL 202 >gi|121607504|ref|YP_995311.1| recombination protein RecR [Verminephrobacter eiseniae EF01-2] gi|171769526|sp|A1WF86|RECR_VEREI RecName: Full=Recombination protein recR gi|121552144|gb|ABM56293.1| DNA replication and repair protein RecR [Verminephrobacter eiseniae EF01-2] Length = 196 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 114/194 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++ LI+ L R+PG G +SA+R HL++ LA+A+ + V C+ C Sbjct: 3 SSNALDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGGQALAQALHDALGSVQHCARCHT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C C+D RDA+ + VVE AD ALER+ A LY VL G LSPLD +GP++I Sbjct: 63 FTEAETCRTCLDPGRDATRLCVVETPADQAALERTGAFKGLYFVLMGRLSPLDGVGPKEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+Q LI R ++E+I A + EG+ TAH I LK + +TRLA G+P+GSEL+Y Sbjct: 123 GLQKLIARATEGGVQEVILATNFHAEGEATAHVISQALKRQGLHVTRLARGVPVGSELEY 182 Query: 186 LDDGTIFEAIRSRT 199 +D GTI A+ R Sbjct: 183 VDLGTIAHALVDRR 196 >gi|83951297|ref|ZP_00960029.1| recombination protein RecR [Roseovarius nubinhibens ISM] gi|83836303|gb|EAP75600.1| recombination protein RecR [Roseovarius nubinhibens ISM] Length = 197 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 1/194 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + K+I+ LI ++A++PG GPRSARRA LHL++K+E L PLA+ M + C CGN Sbjct: 3 STKDIDALIDMMAKLPGLGPRSARRAVLHLIRKREHKLRPLADLMQIVAATARECDRCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC D +R ++ VVEDVADLWA+ER+ A YHVLGG+LS LD++GP+++ Sbjct: 63 VGTTDICDICRDDRRATGLLCVVEDVADLWAMERAGAFKGRYHVLGGTLSALDQVGPDEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R+ + I E+I A++AT++GQTTAHYI D+++ V +T LA G+P+G ELDY Sbjct: 123 RIPGLVARLAEENITEVILALNATVDGQTTAHYIADQIEDR-VTLTSLAKGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRT 199 LDDGTI A+ +R Sbjct: 182 LDDGTITAALSARK 195 >gi|84685228|ref|ZP_01013127.1| recombination protein RecR [Maritimibacter alkaliphilus HTCC2654] gi|84666960|gb|EAQ13431.1| recombination protein RecR [Rhodobacterales bacterium HTCC2654] Length = 198 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 102/199 (51%), Positives = 140/199 (70%), Gaps = 3/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + ++IENLI+++A++PG GPRSARRA LHL++K+ LL PLA+AM + C Sbjct: 1 MSE--APRDIENLIELMAKLPGLGPRSARRAVLHLIRKRGLLLAPLADAMHAVAVSAREC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNV TT+ C IC ++R + VVEDVADLWA+ER+ YHVLGG+LS LD I Sbjct: 59 ITCGNVGTTEVCDICTSEKRATGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I L+ R+ + I E+I A++AT+ GQTTAHYI ++L+G +T LA G+P+G Sbjct: 119 GPDELRIPKLVSRVGDENITEVILALNATVNGQTTAHYIAEELEGRC-DVTSLAQGVPIG 177 Query: 181 SELDYLDDGTIFEAIRSRT 199 ELDYLDDGTI A+R+R Sbjct: 178 GELDYLDDGTITAALRARK 196 >gi|222110706|ref|YP_002552970.1| recombination protein recr [Acidovorax ebreus TPSY] gi|221730150|gb|ACM32970.1| recombination protein RecR [Acidovorax ebreus TPSY] Length = 196 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 114/191 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI+ L R+PG G +SA+R HL++ L++A+A +V C C Sbjct: 6 SLDALIQALRRLPGVGVKSAQRMAFHLLQHDRAGAQMLSQALAQAATQVRHCERCHTFTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C C+D RDA+ + VVE AD A+ER+ A LY VL G LSPLD +GP DIG+ Sbjct: 66 GAVCETCLDPARDATRLCVVETPADQAAMERTAAFKGLYFVLMGRLSPLDGVGPRDIGVH 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L+ER ++E+I A S T EG+ TAH I + LK V +TRLA G+P+GSEL+Y+D Sbjct: 126 NLLERASDGVVQEVILATSFTAEGEATAHAIGEALKRRGVHVTRLARGVPVGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALADRR 196 >gi|315653114|ref|ZP_07906039.1| recombination protein R [Lactobacillus iners ATCC 55195] gi|315489479|gb|EFU79116.1| recombination protein R [Lactobacillus iners ATCC 55195] Length = 199 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I Sbjct: 63 ITDTDPCEICSNDNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++ Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRISL 199 >gi|172047911|sp|A8GNG2|RECR_RICAH RecName: Full=Recombination protein recR Length = 201 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 92/199 (46%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT C+IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTLSAAINLRQP 199 >gi|183222802|ref|YP_001840798.1| recombination protein RecR [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912834|ref|YP_001964389.1| recombination protein RecR [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777510|gb|ABZ95811.1| Recombinational DNA repair protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781224|gb|ABZ99522.1| Recombination protein RecR [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 202 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 117/199 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ + + LI+ + +PG G +SA R H+++ + K+ C Sbjct: 4 SHLSDPQFQKLIQAFSSLPGIGKKSATRIGFHILRMDPSTFQSWINHIEEAKTKLRFCDD 63 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + C+IC+ +RD ++ VVE D++ +E +K + YHVL G++SPLD IGP Sbjct: 64 CGGLTEDSICSICLSDRRDNGILCVVEQPEDIFFIENTKEYSGKYHVLNGAISPLDGIGP 123 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I+ L++R+++ I+E++ A + T+EG TA Y+ +K +++KITR+A+GI +G Sbjct: 124 EQLRIKQLMQRLDIGNIKEVLIATNPTLEGDATASYLSTVIKPMEIKITRIAHGITIGGT 183 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ +AI+SR L Sbjct: 184 LEYSDQYTLGKAIKSRLTL 202 >gi|110834634|ref|YP_693493.1| recombination protein RecR [Alcanivorax borkumensis SK2] gi|123345433|sp|Q0VNM7|RECR_ALCBS RecName: Full=Recombination protein recR gi|110647745|emb|CAL17221.1| recombination protein RecR [Alcanivorax borkumensis SK2] Length = 200 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 109/193 (56%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ LI +PG GPRSA+R L+ + + L +A+ + V C C N Sbjct: 5 PLVDQLINAFTCLPGVGPRSAQRMAYALLDRGRESGRRLGDALHAAMDGVQHCERCRNYA 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C +C D +RDAS++ +V D+ A E+S Y VL G LSPLD IGP ++G+ Sbjct: 65 QSTLCPVCEDPRRDASLVCIVATPGDVLAFEQSGEYRGQYFVLMGELSPLDGIGPRELGL 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L +R+ +I ELI A T+EG+ TAHY++ + V ++R+A G+PMG EL+++D Sbjct: 125 DVLEQRLNEGQISELILATGTTVEGEATAHYVLGLAQDAGVGVSRIAQGVPMGGELEFVD 184 Query: 188 DGTIFEAIRSRTV 200 T+ +A++ R Sbjct: 185 GATLAQALKGRRP 197 >gi|332299030|ref|YP_004440952.1| Recombination protein recR [Treponema brennaborense DSM 12168] gi|332182133|gb|AEE17821.1| Recombination protein recR [Treponema brennaborense DSM 12168] Length = 195 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 115/190 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L + +R+PG G +SA R + +L+K + A+ +A + +K+ CS+CG+ Sbjct: 3 ALEELTESFSRLPGIGKKSASRISNYLLKADRGFMLRFAQQIAVLQDKIKPCSVCGSYTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPCAIC D R+ +++ VVE D+ +E S+ L+HVLGG ++PLD +GPE + I Sbjct: 63 EDPCAICSDPLRERNLLCVVEQPQDVQTIEASREFRGLFHVLGGVIAPLDGVGPEQLSIG 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ER+ + E+I A + T+EG TTA Y+ L V +TRLA G+P+G +L+Y D Sbjct: 123 KLMERLGDGSVTEVIIATNPTVEGDTTALYLQKLLAKTGVTVTRLASGLPVGGDLEYADR 182 Query: 189 GTIFEAIRSR 198 T+ + R R Sbjct: 183 LTLARSFRGR 192 >gi|17545913|ref|NP_519315.1| recombination protein RecR [Ralstonia solanacearum GMI1000] gi|20139463|sp|Q8Y050|RECR_RALSO RecName: Full=Recombination protein recR gi|17428208|emb|CAD14896.1| probable recombination protein recr [Ralstonia solanacearum GMI1000] Length = 207 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C Sbjct: 8 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNT 67 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207 >gi|163795451|ref|ZP_02189418.1| recombination protein RecR [alpha proteobacterium BAL199] gi|159179437|gb|EDP63968.1| recombination protein RecR [alpha proteobacterium BAL199] Length = 197 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 103/197 (52%), Positives = 142/197 (72%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + E++ ++ LA++PG GPRSARRA LHL+K+++ L+ PLAEA+A V C+ CG Sbjct: 1 MAVGELDRAMQFLAKLPGLGPRSARRAILHLMKRRDSLMLPLAEALAAAARSVRPCTTCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT DPC IC D +RD I VVEDVAD+WALER+ A YHV+GG LS LD IGP D Sbjct: 61 NLDTVDPCGICSDPRRDPQAICVVEDVADVWALERAVAFKGRYHVIGGVLSALDGIGPGD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + L+ R + E+I A++AT++GQTTAHY+ D+L VK++RLA+G+P+G ELD Sbjct: 121 LNVDGLVLRAADPAVNEVILAMNATVDGQTTAHYLADRLASTGVKVSRLAHGVPVGGELD 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLDDGT+ +A+R+R L Sbjct: 181 YLDDGTLAQALRARQAL 197 >gi|320538820|ref|ZP_08038496.1| gap repair protein [Serratia symbiotica str. Tucson] gi|320030980|gb|EFW12983.1| gap repair protein [Serratia symbiotica str. Tucson] Length = 202 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLELLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP D Sbjct: 63 FTEQDICTICANPRRQKNGQICVVETPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+E ++I E+I A + T+EG+ TA+YI + V +R+A+G+P+G EL+ Sbjct: 123 IGLDRLGQRLEKERITEIILATNPTVEGEATANYIAEMCGQYGVLASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHAI 199 >gi|259501363|ref|ZP_05744265.1| recombination protein R [Lactobacillus iners DSM 13335] gi|302190916|ref|ZP_07267170.1| recombination protein RecR [Lactobacillus iners AB-1] gi|309806646|ref|ZP_07700642.1| recombination protein RecR [Lactobacillus iners LactinV 03V1-b] gi|259167216|gb|EEW51711.1| recombination protein R [Lactobacillus iners DSM 13335] gi|308166951|gb|EFO69134.1| recombination protein RecR [Lactobacillus iners LactinV 03V1-b] Length = 199 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I Sbjct: 63 ITDTDPCEICSNTNRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++ Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRISL 199 >gi|309803527|ref|ZP_07697620.1| recombination protein RecR [Lactobacillus iners LactinV 11V1-d] gi|309805424|ref|ZP_07699471.1| recombination protein RecR [Lactobacillus iners LactinV 09V1-c] gi|309808230|ref|ZP_07702139.1| recombination protein RecR [Lactobacillus iners LactinV 01V1-a] gi|312870933|ref|ZP_07731038.1| recombination protein RecR [Lactobacillus iners LEAF 3008A-a] gi|312872172|ref|ZP_07732245.1| recombination protein RecR [Lactobacillus iners LEAF 2062A-h1] gi|312873610|ref|ZP_07733657.1| recombination protein RecR [Lactobacillus iners LEAF 2052A-d] gi|312875739|ref|ZP_07735734.1| recombination protein RecR [Lactobacillus iners LEAF 2053A-b] gi|325912934|ref|ZP_08175308.1| recombination protein RecR [Lactobacillus iners UPII 60-B] gi|329920994|ref|ZP_08277522.1| recombination protein RecR [Lactobacillus iners SPIN 1401G] gi|308164411|gb|EFO66665.1| recombination protein RecR [Lactobacillus iners LactinV 11V1-d] gi|308165242|gb|EFO67478.1| recombination protein RecR [Lactobacillus iners LactinV 09V1-c] gi|308168518|gb|EFO70627.1| recombination protein RecR [Lactobacillus iners LactinV 01V1-a] gi|311088731|gb|EFQ47180.1| recombination protein RecR [Lactobacillus iners LEAF 2053A-b] gi|311090863|gb|EFQ49260.1| recombination protein RecR [Lactobacillus iners LEAF 2052A-d] gi|311092256|gb|EFQ50627.1| recombination protein RecR [Lactobacillus iners LEAF 2062A-h1] gi|311093623|gb|EFQ51962.1| recombination protein RecR [Lactobacillus iners LEAF 3008A-a] gi|325477748|gb|EGC80886.1| recombination protein RecR [Lactobacillus iners UPII 60-B] gi|328935270|gb|EGG31750.1| recombination protein RecR [Lactobacillus iners SPIN 1401G] Length = 199 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 123/197 (62%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + +++ + ++A+ ++ CSICGN Sbjct: 3 YPLPIAKLIDNFMKLPGIGEKTATRLAFYTLDMQDKDVEDFSQALIEAKKQIHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC + RD ++++VVE D+ A E+ N LYHVL G LSP+D IGPE+I Sbjct: 63 ITDTDPCEICSNANRDQTIMMVVEQAKDVMAFEQMGEYNGLYHVLHGVLSPMDGIGPEEI 122 Query: 126 GIQSLIERIEV-KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I++LI R++ +IRE+I A+++T EG++TA Y+ +K +K++RLA G+ +GS+++ Sbjct: 123 NIKNLIIRLQKSDEIREVILALNSTPEGESTAMYLGKLIKPSGIKVSRLASGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ R L Sbjct: 183 YANSITLKRAVQGRISL 199 >gi|88802321|ref|ZP_01117848.1| recombination protein recR [Polaribacter irgensii 23-P] gi|88781179|gb|EAR12357.1| recombination protein recR [Polaribacter irgensii 23-P] Length = 205 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 126/196 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++R+PG G R+A R LHL+K+ + L+EA+ ++ N V C Sbjct: 1 MDFSSKLLENAVNEVSRLPGIGKRTALRLVLHLLKQPVEHTKYLSEALLHLRNDVKTCEK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T C IC + +R+ +++ VVED+ D+ A+E + LYHVLGG +SP++ IGP Sbjct: 61 CHNISDTVLCDICQNPRRNPALVCVVEDIRDVMAIESTSQFKGLYHVLGGKISPIEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I SL+ +I +I+ELIFA+S+T+EG TT YI +++ ++ + +A GI +G E Sbjct: 121 QNLKIDSLVHKIGEGEIKELIFALSSTMEGDTTNFYIFKQIEKFNIITSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSIVNR 196 >gi|332971117|gb|EGK10084.1| recombination protein R [Psychrobacter sp. 1501(2011)] Length = 195 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 121/195 (62%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ +NL+K L +PG G ++A+R LHL+ K LA+A+ + + C C Sbjct: 1 MLTEKFDNLVKQLRVLPGVGQKTAQRMALHLLNGKRPQGSALAQALDIAMHDIIECRQCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC+D +RD V+ VVE AD+ A+E+S Y VLGG LSPLD I +D Sbjct: 61 SFSDDEVCPICLDPRRDDRVLCVVETAADVMAIEQSAGYRGRYFVLGGHLSPLDGINADD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R++ + ELI A S T+EGQTTAH+I + ++ K+TR+A GIPMG EL+ Sbjct: 121 LNIDQLVSRVKASPVEELILATSTTVEGQTTAHFISEAVRRHVGKVTRIAQGIPMGGELE 180 Query: 185 YLDDGTIFEAIRSRT 199 YLD T+ +A+++R+ Sbjct: 181 YLDSMTLSQALQNRS 195 >gi|313886627|ref|ZP_07820339.1| recombination protein RecR [Porphyromonas asaccharolytica PR426713P-I] gi|332299535|ref|YP_004441456.1| Recombination protein recR [Porphyromonas asaccharolytica DSM 20707] gi|312923923|gb|EFR34720.1| recombination protein RecR [Porphyromonas asaccharolytica PR426713P-I] gi|332176598|gb|AEE12288.1| Recombination protein recR [Porphyromonas asaccharolytica DSM 20707] Length = 205 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 123/200 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + + +E + L+ +PG G ++A R LHL+++ L EA+ ++ K+C C Sbjct: 1 MKDQYPSQWLERAVDQLSLLPGIGRKTAMRMALHLLRQPPSYAQHLGEAIIDLRQKICYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + + C IC D QRD SV+ VVE V D+ +E++ LYHVLGG +SP+D I Sbjct: 61 ERCHCISDSPLCDICSDPQRDQSVVCVVEQVKDVLTIEQTHRYKGLYHVLGGIISPIDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P D+ I+SL ER++ + IRE+I AI +T+EG TT +YI +L+ V ++ +A GI +G Sbjct: 121 TPNDLEIESLYERVQEEPIREVILAIRSTLEGDTTNYYIYKRLESTGVLVSLIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E++Y D+ T+ AI +RT Sbjct: 181 DEIEYADEVTLGSAIANRTP 200 >gi|156742263|ref|YP_001432392.1| recombination protein RecR [Roseiflexus castenholzii DSM 13941] gi|189029370|sp|A7NFA0|RECR_ROSCS RecName: Full=Recombination protein recR gi|156233591|gb|ABU58374.1| recombination protein RecR [Roseiflexus castenholzii DSM 13941] Length = 205 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 117/198 (59%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 +I + LI+ L+R+PG GP++A R T L++ ++L LA A+ + +V LCS C Sbjct: 8 QILPTPVIRLIEELSRLPGVGPKTASRLTFFLLRAPDELPRALANALIGLKQQVQLCSRC 67 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + D CAIC + RD ++ VVE+ D+ A+ER+ LYHVL G ++PL+ + E Sbjct: 68 YFITQNDLCAICANPARDQRIVCVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNRE 127 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 DI L++R+ + I E+I A + +EG+ TA ++ L + ++TRLA G+P G +L Sbjct: 128 DIYFDELLDRVRAEPIDEVIIATNPNLEGEATAFHLQRALAPLGARVTRLARGLPTGGDL 187 Query: 184 DYLDDGTIFEAIRSRTVL 201 ++ D GT+ A+ R + Sbjct: 188 EWADPGTLGSALEGRREM 205 >gi|319953940|ref|YP_004165207.1| recombination protein recr [Cellulophaga algicola DSM 14237] gi|319422600|gb|ADV49709.1| Recombination protein recR [Cellulophaga algicola DSM 14237] Length = 205 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 129/196 (65%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +EN + ++++PG G R+A R LHL+K+ E+ L A+ + +++ CS Sbjct: 1 MEFSSKLLENAVYEISQLPGIGKRTALRLALHLLKQPEEQTSHLTSALGKLRSQIKFCSN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + +RDA++I VVED+ D+ A+E + LYHVLGG +SP++ +GP Sbjct: 61 CHNISDVALCEICANSKRDAAIICVVEDIRDVMAIENTGQFRGLYHVLGGKISPMECVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SL+E+++ + ELIFA+S+T+EG TT YI +L+G+ VK + +A GI +G E Sbjct: 121 QDLTIVSLVEKVKKGGVSELIFALSSTMEGDTTNFYIFKQLEGVTVKTSTIARGIAVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEITLGRSILNR 196 >gi|149916414|ref|ZP_01904933.1| recombination protein RecR [Roseobacter sp. AzwK-3b] gi|149809684|gb|EDM69538.1| recombination protein RecR [Roseobacter sp. AzwK-3b] Length = 197 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 137/195 (70%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++I+ LI+++A++PG GPRSARRA LHL+ K++ L PLA+ M + C CGN Sbjct: 3 SNRDIDALIEMMAKLPGLGPRSARRAVLHLIAKRDLQLIPLADLMQRVAATARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TT+ C IC ++R I VVEDVADLWA+ER A YHVLGG+LS LD++GPE + Sbjct: 63 IGTTEICDICAAEKRANGQICVVEDVADLWAMERGHAFKGRYHVLGGTLSALDQVGPEQL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I LI+R+ + I E+I A++AT+EGQTTAHYI D+L G V +T LA G+P+G ELDY Sbjct: 123 RIPQLIDRVTAESITEVILALNATVEGQTTAHYIADQLDGR-VTLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI A+ +R Sbjct: 182 LDDGTIGAALAARKQ 196 >gi|163737247|ref|ZP_02144665.1| recombination protein RecR [Phaeobacter gallaeciensis BS107] gi|163740343|ref|ZP_02147737.1| recombination protein RecR [Phaeobacter gallaeciensis 2.10] gi|161386201|gb|EDQ10576.1| recombination protein RecR [Phaeobacter gallaeciensis 2.10] gi|161389851|gb|EDQ14202.1| recombination protein RecR [Phaeobacter gallaeciensis BS107] Length = 199 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 104/201 (51%), Positives = 143/201 (71%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + +IE+LI ++A++PG GPRSARRA LHL++K+ LL PLAE M+ + C Sbjct: 1 MIKN-STTDIEDLIALMAKLPGLGPRSARRAVLHLIRKRALLLTPLAETMSEVAATAREC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNV T D C IC D R + VVEDV+DLWA+ER+ YHVLGG+LS LD + Sbjct: 60 LNCGNVGTGDLCTICEDMTRANGELCVVEDVSDLWAMERAAVFKGRYHVLGGTLSALDAV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I L++R++ +++ E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G Sbjct: 120 GPEDLRIPRLVDRVQAEQVSEVILALNATIDGQTTAHYIADQLSG-QVRLTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GTI A+R+R + Sbjct: 179 GELDYLDEGTITAALRARKDI 199 >gi|71065354|ref|YP_264081.1| recombination protein RecR [Psychrobacter arcticus 273-4] gi|123649110|sp|Q4FTL1|RECR_PSYA2 RecName: Full=Recombination protein recR gi|71038339|gb|AAZ18647.1| DNA replication and repair protein RecR [Psychrobacter arcticus 273-4] Length = 197 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 119/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + L+K L +PG G +SA+R LHL+ KK LA+A+ + C C Sbjct: 1 MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C +C D +RD +++ VVE AD+ A+E++ Y VLGG LSP+D I +D Sbjct: 61 SFSDDAVCPLCQDPRRDDALLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ R++ + + ELI A T+EGQTTAH+I + + K+TRLA G+PMG EL+ Sbjct: 121 LNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFINEAVSRHVNKVTRLAQGVPMGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 YLD T+ +A+++R+ L Sbjct: 181 YLDSMTLGQAMQNRSFL 197 >gi|157825725|ref|YP_001493445.1| recombination protein RecR [Rickettsia akari str. Hartford] gi|157799683|gb|ABV74937.1| recombination protein RecR [Rickettsia akari str. Hartford] Length = 207 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 92/199 (46%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 7 MNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCK 66 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT C+IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R Sbjct: 67 ICGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQN 126 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 127 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 186 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 187 ELDYLDEGTLSAAINLRQP 205 >gi|260102439|ref|ZP_05752676.1| recombination protein R [Lactobacillus helveticus DSM 20075] gi|260083759|gb|EEW67879.1| recombination protein R [Lactobacillus helveticus DSM 20075] Length = 199 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I +LI R+PG G ++A R + + E+ + ++A+ + N + C ICGN Sbjct: 3 YPLPIAHLIDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE I Sbjct: 63 ITEKEVCDICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEKI 122 Query: 126 GIQSLIERIEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +E+I A+++T EG++TA YI +K ++K+TRLA G+ +GS+++ Sbjct: 123 NIKSLITRLQKNDDVKEVILALNSTPEGESTAMYISKLIKPAEIKVTRLAAGLSVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTAL 199 >gi|257066285|ref|YP_003152541.1| recombination protein RecR [Anaerococcus prevotii DSM 20548] gi|256798165|gb|ACV28820.1| recombination protein RecR [Anaerococcus prevotii DSM 20548] Length = 201 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + ++NLI+ ++P G +SA R + +V+ + + ++++ + +++ C I Sbjct: 1 MALYPESLQNLIEQFQKLPTIGRKSAERLAMAIVESDYKSVDDFSKSLTEVKDRIHACKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ + C IC D R+ + +VEDV +L A+E+S A YHVLGG +SP D +GP Sbjct: 61 CGNLTEDEVCDICKDITRNEEYLCIVEDVRNLIAIEKSHAYRGKYHVLGGLISPSDGLGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + I L+ERIE + I E+I AIS+TIEG+TT ++ + L ++KIT+LA GIP+GS Sbjct: 121 DQLNIDKLLERIEKENIEEVILAISSTIEGETTVLFLTNLLSERNIKITKLAQGIPVGSN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYFDQLTLERALEDRREI 199 >gi|229890155|sp|A4G3Z0|RECR_HERAR RecName: Full=Recombination protein recR gi|193222271|emb|CAL61227.2| Recombination protein RecR [Herminiimonas arsenicoxydans] Length = 198 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 114/195 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L + L R+PG GP+SA+R HL++ L A++ +V C++C Sbjct: 3 SPSSLAFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C C+D +R+A+++ VVE D +E++ LY VL G LSPLD IGP+DI Sbjct: 63 FTESAVCETCLDAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ LI R ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y Sbjct: 123 HLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEY 182 Query: 186 LDDGTIFEAIRSRTV 200 +D GTI A+ R Sbjct: 183 VDAGTIARAMLDRRT 197 >gi|295100447|emb|CBK97992.1| recombination protein RecR [Faecalibacterium prausnitzii L2-6] Length = 199 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 116/199 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 T +E LI+ ++ PG G + A R ++ + LAEA+ N + ++ C + Sbjct: 1 MGYTAAPLEKLIEQFSQFPGIGRKGATRMAYQVLSMSDADAAALAEAIQNAHTRLHRCRV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N + C IC +RD S I VVE D+ A ER++ + LYHVL G +SP+D IG Sbjct: 61 CQNYTEAELCPICSSAKRDRSTICVVETPRDVQAFERTREYHGLYHVLHGLISPMDGIGA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++ L+ R+ +++E+I A++ T+EG+ TA Y+ +K + +K TRLAYG+P+G Sbjct: 121 EQLSVKELLARLGSGEVKEVIMAMNPTVEGEATAMYLAKLIKPLGIKTTRLAYGLPVGGS 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T++ A+ R L Sbjct: 181 LEYTDETTLYRALSGRDEL 199 >gi|307822529|ref|ZP_07652760.1| recombination protein RecR [Methylobacter tundripaludum SV96] gi|307736133|gb|EFO06979.1| recombination protein RecR [Methylobacter tundripaludum SV96] Length = 215 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 115/193 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + LI+ L +PG GP++A+R HL+++ LA+ + K+ CS C + Sbjct: 23 LLGQLIQNLCCLPGVGPKTAQRMAFHLLQRDRNGANMLAQTLLQAIEKMRHCSQCRTLTE 82 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC D+ RD ++I +VE +D+W ++++ Y VL G LSPLD IGP+++G+ Sbjct: 83 GELCEICADKSRDDTLICIVESPSDVWIVDQATMFKGRYFVLHGRLSPLDGIGPDELGLD 142 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +++ I+ELI A ++T+EG+ TA++I + + V +R+A+G+PMG EL++ D Sbjct: 143 LLEQQLATGHIKELILATNSTVEGEATAYFISELARKHQVPASRIAHGVPMGGELEFTDS 202 Query: 189 GTIFEAIRSRTVL 201 GT+ A R + Sbjct: 203 GTLSHAFNGRVGM 215 >gi|71083215|ref|YP_265934.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762355|ref|ZP_01264320.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1002] gi|123647013|sp|Q4FNA8|RECR_PELUB RecName: Full=Recombination protein recR gi|71062328|gb|AAZ21331.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|91718157|gb|EAS84807.1| recR-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 203 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 82/194 (42%), Positives = 128/194 (65%), Gaps = 2/194 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 EIE LIK+++++PG GP+SA+R L L+ +++L+ P+A +A +Y V C CG + + Sbjct: 6 EIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPMANTLAQVYKNVIRCQSCGTLKS 65 Query: 69 TD-PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C C + + + I VVED+AD W++E S +H+LGG++S + ED+ I Sbjct: 66 NSLGCNNCENSKEKYNKICVVEDIADQWSIENSNIYKGYFHILGGTISSAGQR-KEDLLI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ER+ + I E+I A SAT+EGQTTA+YI D LK K+T+LA G+P+G E++ LD Sbjct: 125 NSLVERVSRENIEEVILATSATVEGQTTAYYIEDSLKKTSTKVTKLAQGLPVGGEIESLD 184 Query: 188 DGTIFEAIRSRTVL 201 DGT++ A ++RT + Sbjct: 185 DGTLYSAFKNRTGI 198 >gi|326317364|ref|YP_004235036.1| recombination protein RecR [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374200|gb|ADX46469.1| recombination protein RecR [Acidovorax avenae subsp. avenae ATCC 19860] Length = 199 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 116/199 (58%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ L++ L R+PG G +SA+R HL++ Q L+ A+ + V C Sbjct: 1 MASGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C + C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD I Sbjct: 61 ARCHTFTEGEVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+DIG L+ER ++E+I A + T EG+ TAH + + LK + +TRLA G+P+G Sbjct: 121 GPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 SEL+Y+D GTI A+ R Sbjct: 181 SELEYVDLGTIAHALVDRR 199 >gi|261855384|ref|YP_003262667.1| recombination protein RecR [Halothiobacillus neapolitanus c2] gi|261835853|gb|ACX95620.1| recombination protein RecR [Halothiobacillus neapolitanus c2] Length = 197 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 112/196 (57%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + L++ L +P G ++A+R L L++ + LA A+ + C C Sbjct: 1 MFSPKFVALVQALRGLPSVGQKTAQRMALQLLEHDREGAAQLARAIVAALEGIGRCESCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 T C +C D RDA+ + +VE D A+E+S A LY +L G LSPLD IGPED Sbjct: 61 IFSETPVCPVCADNHRDATQLCIVESPTDWLAIEQSGAYQGLYFILSGHLSPLDGIGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IGI L+ R+ + E+I A SATIEG+ TA YIMD++ K+TRLA G+PMG EL+ Sbjct: 121 IGIPELMNRLANSPVEEIIMATSATIEGEATAGYIMDRVDPARYKVTRLAQGVPMGGELE 180 Query: 185 YLDDGTIFEAIRSRTV 200 YLD T+ A++SR Sbjct: 181 YLDAQTLSLALKSRRS 196 >gi|82542965|ref|YP_406912.1| recombination protein RecR [Shigella boydii Sb227] gi|82775797|ref|YP_402144.1| recombination protein RecR [Shigella dysenteriae Sd197] gi|309786055|ref|ZP_07680684.1| recombination protein RecR [Shigella dysenteriae 1617] gi|123560410|sp|Q325C4|RECR_SHIBS RecName: Full=Recombination protein recR gi|123563329|sp|Q32J52|RECR_SHIDS RecName: Full=Recombination protein recR gi|81239945|gb|ABB60655.1| recombination and repair protein [Shigella dysenteriae Sd197] gi|81244376|gb|ABB65084.1| recombination and repair [Shigella boydii Sb227] gi|308926166|gb|EFP71644.1| recombination protein RecR [Shigella dysenteriae 1617] gi|320184088|gb|EFW58907.1| Recombination protein RecR [Shigella flexneri CDC 796-83] gi|332098534|gb|EGJ03500.1| recombination protein RecR [Shigella boydii 3594-74] Length = 201 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L + G GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R I VVE AD++A+E++ + Y VL G LSPLD IGP+D Sbjct: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ +KI E+I A + T+EG+ TA+YI + DV+ +R+A+G+P+G EL+ Sbjct: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRHKI 199 >gi|329121192|ref|ZP_08249820.1| recombination protein R [Dialister micraerophilus DSM 19965] gi|327470274|gb|EGF15735.1| recombination protein R [Dialister micraerophilus DSM 19965] Length = 196 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 120/192 (62%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E + + ++PG G +SA+R ++ + ++ + + + N VC CSIC N+ T+ Sbjct: 5 LEEVAEQFRKLPGIGVKSAKRLAYFMLMRPQKDIDTFLKTIENAKKSVCYCSICCNLATS 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 DPC+IC D +R++S++ +VE+ D+ A+E+S N LYHVL G LSPLD IGPE++ I+ Sbjct: 65 DPCSICTDSKRNSSLLCIVENPQDVHAMEQSHEYNGLYHVLHGVLSPLDGIGPENLKIKE 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R++ I E+I A EG+ TA+YI D +K +KITR A G+P GS + Y D Sbjct: 125 LLTRLKDSNINEVIIATDPDTEGEATAYYIADLIKPSGIKITRPARGLPAGSNIGYADSI 184 Query: 190 TIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 185 TLANAVENRKEI 196 >gi|227832006|ref|YP_002833713.1| recombination protein [Corynebacterium aurimucosum ATCC 700975] gi|262184138|ref|ZP_06043559.1| recombination protein RecR [Corynebacterium aurimucosum ATCC 700975] gi|227453022|gb|ACP31775.1| recombination protein [Corynebacterium aurimucosum ATCC 700975] Length = 218 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 21/215 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R H++ + + + L +A+ + + V C IC Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHVLHQDPEEIDRLQKALGAVRDGVTFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C ICI+ QRDAS I VVE+ D+ +ER+ + YHVLGG+L PL +GP+D Sbjct: 61 NISREEVCRICINSQRDASTICVVEEPKDIQVIERTGEYDGRYHVLGGALDPLANVGPKD 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I L++R+ + I E+I A EG+ TA Y++ L+ Sbjct: 121 LNISQLLQRLGGVLPDRELADSTPEEPLYDDSPDITEVILATDPNTEGEATAAYLVRLLR 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 +KITRLA G+P+G +L+++D+ T+ A+ R Sbjct: 181 DFPGLKITRLASGMPLGGDLEFVDELTLSRALSGR 215 >gi|269467850|gb|EEZ79593.1| recombinational DNA repair protein, RecF pathway [uncultured SUP05 cluster bacterium] Length = 194 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 114/190 (60%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 IE+L K +PG G ++A+R HL+++ + LA+A+ + V CS C + Sbjct: 2 IESLNKAFCTLPGVGSKTAQRFVYHLLERNREGGLDLAKALVDAMEHVKHCSSCRTLSEK 61 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 C IC + RD+S + ++E D+ A+E+S Y VL G LSP+D IG ++G+ Sbjct: 62 TICDICANDVRDSSQLCIIETPTDIHAIEKSGVYKGKYFVLSGYLSPIDGIGAAELGLDE 121 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L ++++ + I E+I A +AT+EG+ TAHYI + K DVKITR+A+GIP+G EL+Y D Sbjct: 122 LEQKLKDQAIEEIILATNATVEGEVTAHYISNMAKQFDVKITRIAHGIPIGGELEYADIN 181 Query: 190 TIFEAIRSRT 199 TI A+ R Sbjct: 182 TIAHALSGRK 191 >gi|58580689|ref|YP_199705.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622623|ref|YP_449995.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710951|ref|ZP_02242158.1| recombination protein RecR [Xanthomonas oryzae pv. oryzicola BLS256] gi|188578333|ref|YP_001915262.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae PXO99A] gi|73621531|sp|Q5H401|RECR_XANOR RecName: Full=Recombination protein recR gi|123522961|sp|Q2P6V6|RECR_XANOM RecName: Full=Recombination protein recR gi|58425283|gb|AAW74320.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366563|dbj|BAE67721.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522785|gb|ACD60730.1| recombination protein RecR [Xanthomonas oryzae pv. oryzae PXO99A] Length = 197 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 112/194 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI+ +PG G +SA+R H+++++ + LA +AN KV C C + Sbjct: 2 SSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 ++ C IC RD + VVE AD A+E + LY VL G LSPLD IGP ++G Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|319787608|ref|YP_004147083.1| recombination protein RecR [Pseudoxanthomonas suwonensis 11-1] gi|317466120|gb|ADV27852.1| recombination protein RecR [Pseudoxanthomonas suwonensis 11-1] Length = 195 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 112/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E LI+ +PG G +SA+R H++++ + LA +A ++ C+ C + Sbjct: 2 LLEELIEAFRVLPGVGRKSAQRMAYHVLERGREGGKRLATVLAEAVERIGHCAQCRDFSE 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + CA+C RD + VVE AD A+E + +Y VL G LSPLD +GP ++G++ Sbjct: 62 DEVCAVCASGSRDRQQLCVVETPADRLAIETATGYRGVYFVLQGRLSPLDGVGPRELGLE 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +L R+ ++ E+I A SAT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+D Sbjct: 122 TLGTRLAAGEVSEMIIATSATVEGEATAHYLAQLARQHGVRPSRLAQGLPLGGELEYVDR 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A +R + Sbjct: 182 GTLSHAFGTRAEM 194 >gi|225020186|ref|ZP_03709378.1| hypothetical protein CORMATOL_00188 [Corynebacterium matruchotii ATCC 33806] gi|305680112|ref|ZP_07402922.1| recombination protein RecR [Corynebacterium matruchotii ATCC 14266] gi|224946930|gb|EEG28139.1| hypothetical protein CORMATOL_00188 [Corynebacterium matruchotii ATCC 33806] gi|305660732|gb|EFM50229.1| recombination protein RecR [Corynebacterium matruchotii ATCC 14266] Length = 218 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R HL+ + L A+ + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLHVDPIDITRLQAALGAVQQGVSFCRICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D RD S I VVE+ D+ LER+ N YHVLGG+L PL+ IGP++ Sbjct: 61 NISRDEVCRICADSGRDRSTICVVEEPKDIQVLERTGEFNGRYHVLGGALDPLNSIGPKE 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++RI +I E+I A EG+ TA Y+ LK Sbjct: 121 LNITALLQRIGGVLPDRELADSTPEQPLFDTTPEITEVILATDPNTEGEATASYLARLLK 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 + ++RLA G+P+G +L+++D+ T+ A+ R L Sbjct: 181 DFPGLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL 218 >gi|299067245|emb|CBJ38442.1| Recombination protein recR [Ralstonia solanacearum CMR15] Length = 206 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C Sbjct: 7 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNT 66 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDA+V+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 67 FTEQDVCETCLDPRRDAAVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G Sbjct: 127 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 186 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206 >gi|22124969|ref|NP_668392.1| recombination protein RecR [Yersinia pestis KIM 10] gi|45440658|ref|NP_992197.1| recombination protein RecR [Yersinia pestis biovar Microtus str. 91001] gi|51595344|ref|YP_069535.1| recombination protein RecR [Yersinia pseudotuberculosis IP 32953] gi|108808605|ref|YP_652521.1| recombination protein RecR [Yersinia pestis Antiqua] gi|108811133|ref|YP_646900.1| recombination protein RecR [Yersinia pestis Nepal516] gi|145600016|ref|YP_001164092.1| recombination protein RecR [Yersinia pestis Pestoides F] gi|149365031|ref|ZP_01887066.1| recombination protein RecR [Yersinia pestis CA88-4125] gi|153950897|ref|YP_001402017.1| recombination protein RecR [Yersinia pseudotuberculosis IP 31758] gi|162418312|ref|YP_001607272.1| recombination protein RecR [Yersinia pestis Angola] gi|165927675|ref|ZP_02223507.1| recombination protein RecR [Yersinia pestis biovar Orientalis str. F1991016] gi|165935856|ref|ZP_02224426.1| recombination protein RecR [Yersinia pestis biovar Orientalis str. IP275] gi|166010982|ref|ZP_02231880.1| recombination protein RecR [Yersinia pestis biovar Antiqua str. E1979001] gi|166213054|ref|ZP_02239089.1| recombination protein RecR [Yersinia pestis biovar Antiqua str. B42003004] gi|167399385|ref|ZP_02304909.1| recombination protein RecR [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422763|ref|ZP_02314516.1| recombination protein RecR [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423751|ref|ZP_02315504.1| recombination protein RecR [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468906|ref|ZP_02333610.1| recombination protein RecR [Yersinia pestis FV-1] gi|218930153|ref|YP_002348028.1| recombination protein RecR [Yersinia pestis CO92] gi|229838719|ref|ZP_04458878.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896124|ref|ZP_04511294.1| gap repair protein [Yersinia pestis Pestoides A] gi|229899287|ref|ZP_04514430.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901365|ref|ZP_04516487.1| gap repair protein [Yersinia pestis Nepal516] gi|270489550|ref|ZP_06206624.1| recombination protein RecR [Yersinia pestis KIM D27] gi|20139502|sp|Q8ZC97|RECR_YERPE RecName: Full=Recombination protein recR gi|73621532|sp|Q66DP9|RECR_YERPS RecName: Full=Recombination protein recR gi|123072674|sp|Q1C4P6|RECR_YERPA RecName: Full=Recombination protein recR gi|123246655|sp|Q1CL30|RECR_YERPN RecName: Full=Recombination protein recR gi|166223511|sp|A4TPA7|RECR_YERPP RecName: Full=Recombination protein recR gi|166918743|sp|A7FL89|RECR_YERP3 RecName: Full=Recombination protein recR gi|238687263|sp|A9R0Q4|RECR_YERPG RecName: Full=Recombination protein recR gi|21957811|gb|AAM84643.1|AE013709_12 recombination and repair protein [Yersinia pestis KIM 10] gi|45435516|gb|AAS61074.1| recombination protein RecR [Yersinia pestis biovar Microtus str. 91001] gi|51588626|emb|CAH20234.1| putative recombination protein, gap repair [Yersinia pseudotuberculosis IP 32953] gi|108774781|gb|ABG17300.1| DNA replication and repair protein RecR [Yersinia pestis Nepal516] gi|108780518|gb|ABG14576.1| DNA replication and repair protein RecR [Yersinia pestis Antiqua] gi|115348764|emb|CAL21716.1| recombination protein RecR [Yersinia pestis CO92] gi|145211712|gb|ABP41119.1| DNA replication and repair protein RecR [Yersinia pestis Pestoides F] gi|149291444|gb|EDM41518.1| recombination protein RecR [Yersinia pestis CA88-4125] gi|152962392|gb|ABS49853.1| recombination protein RecR [Yersinia pseudotuberculosis IP 31758] gi|162351127|gb|ABX85075.1| recombination protein RecR [Yersinia pestis Angola] gi|165916001|gb|EDR34608.1| recombination protein RecR [Yersinia pestis biovar Orientalis str. IP275] gi|165920429|gb|EDR37706.1| recombination protein RecR [Yersinia pestis biovar Orientalis str. F1991016] gi|165989982|gb|EDR42283.1| recombination protein RecR [Yersinia pestis biovar Antiqua str. E1979001] gi|166205841|gb|EDR50321.1| recombination protein RecR [Yersinia pestis biovar Antiqua str. B42003004] gi|166958354|gb|EDR55375.1| recombination protein RecR [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051889|gb|EDR63297.1| recombination protein RecR [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057921|gb|EDR67667.1| recombination protein RecR [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681294|gb|EEO77388.1| gap repair protein [Yersinia pestis Nepal516] gi|229687689|gb|EEO79762.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695085|gb|EEO85132.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701047|gb|EEO89076.1| gap repair protein [Yersinia pestis Pestoides A] gi|270338054|gb|EFA48831.1| recombination protein RecR [Yersinia pestis KIM D27] gi|320016306|gb|ADV99877.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 201 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC++ +R + I VVE AD+ A+E++ Y VL G LSP+D IGP D Sbjct: 63 FTEQEHCTICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + I E+I A + T+EG TA+YI + +R+A+G+P+G EL+ Sbjct: 123 IGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R + Sbjct: 183 MVDGTTLSHSLAGRNPI 199 >gi|313900839|ref|ZP_07834329.1| recombination protein RecR [Clostridium sp. HGF2] gi|312954259|gb|EFR35937.1| recombination protein RecR [Clostridium sp. HGF2] Length = 198 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K+ E L++ R+PG G ++A R ++ ++ + A N + C++CG Sbjct: 1 MYPKKFEALVECYRRLPGVGIKTAERYAFQTLEWDDETMDSWIHAFQNAKEGLKKCAVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC DQ R++ +I VV+ D+ A+E++K + +YHVL G +S I PED Sbjct: 61 NLSEDDTCDICGDQSRNSQIICVVQSPKDVIAMEKTKEYSGVYHVLNGVISTSKGILPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I I SL+ RI + + A + T+EG+TTA Y+ L+ V +TR+A+G+PMG LD Sbjct: 121 INIDSLLNRISEETEEII-IATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLD 179 Query: 185 YLDDGTIFEAIRSRTVL 201 Y D+ T+ +AI R + Sbjct: 180 YADELTLIKAIEGRKKM 196 >gi|29653995|ref|NP_819687.1| recombination protein RecR [Coxiella burnetii RSA 493] gi|153209000|ref|ZP_01947194.1| recombination protein RecR [Coxiella burnetii 'MSU Goat Q177'] gi|154706620|ref|YP_001424073.1| recombination protein RecR [Coxiella burnetii Dugway 5J108-111] gi|161831096|ref|YP_001596583.1| recombination protein RecR [Coxiella burnetii RSA 331] gi|165920274|ref|ZP_02219546.1| recombination protein RecR [Coxiella burnetii RSA 334] gi|212219111|ref|YP_002305898.1| recombination protein RecR [Coxiella burnetii CbuK_Q154] gi|73621482|sp|Q83DP0|RECR_COXBU RecName: Full=Recombination protein recR gi|29541258|gb|AAO90201.1| recombination protein [Coxiella burnetii RSA 493] gi|120575537|gb|EAX32161.1| recombination protein RecR [Coxiella burnetii 'MSU Goat Q177'] gi|154355906|gb|ABS77368.1| recombination protein [Coxiella burnetii Dugway 5J108-111] gi|161762963|gb|ABX78605.1| recombination protein RecR [Coxiella burnetii RSA 331] gi|165916830|gb|EDR35434.1| recombination protein RecR [Coxiella burnetii RSA 334] gi|212013373|gb|ACJ20753.1| recombination protein [Coxiella burnetii CbuK_Q154] Length = 201 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 125/195 (64%), Gaps = 1/195 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLV-KKKEQLLGPLAEAMANIYNKVCLCSIC 63 + + LI+ L +PG GP+SA+R HL+ K + L++A+ + +V C +C Sbjct: 1 MFSPLTKQLIEALQCLPGIGPKSAQRMAFHLLAKSGQAKGLALSDALQSAIRQVGECKLC 60 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 C IC + +RD++++ VVE AD+ A+E+++ + Y VL G LSPLD IGP+ Sbjct: 61 QIYTEQPLCNICNNPKRDSTLLCVVESPADVVAIEQTQIYSGRYFVLHGHLSPLDGIGPQ 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 +IGI +L++R+ + I+ELI A +AT+EG+ TAHY+ + + +K +R+A+G+PMG EL Sbjct: 121 EIGIPALLDRLRNETIKELIIATNATMEGKATAHYVANHIDHTKIKCSRIAHGVPMGGEL 180 Query: 184 DYLDDGTIFEAIRSR 198 +YLD GT+ A+ SR Sbjct: 181 EYLDGGTLIHALHSR 195 >gi|258645513|ref|ZP_05732982.1| recombination protein RecR [Dialister invisus DSM 15470] gi|260402867|gb|EEW96414.1| recombination protein RecR [Dialister invisus DSM 15470] Length = 196 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 121/195 (62%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++E + + ++PG G ++ARR ++++ ++ + + + +K+C CSIC N+ Sbjct: 2 NSDLELVAEQFRKLPGIGVKTARRLAYFMLERPKEDIDAFINVIHSARDKICYCSICCNL 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T+DPC IC D +RD+SVI VVE D+ ALE+S + LYHVL G LSPLD IGPE + Sbjct: 62 ATSDPCEICGDNRRDSSVICVVEHPQDVQALEQSHEYHGLYHVLHGVLSPLDGIGPEQLK 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I+ L+ R+ ++E+I A EG+ TA+Y+ +K + V++TR+A G+P G ++ Y Sbjct: 122 IKELLNRLADDTVKEVIIATDPNTEGEATAYYLSRLIKPLSVRVTRIARGLPAGGDVGYA 181 Query: 187 DDGTIFEAIRSRTVL 201 D T+ A+ +R + Sbjct: 182 DSMTLAGAVENRKEM 196 >gi|296136310|ref|YP_003643552.1| recombination protein RecR [Thiomonas intermedia K12] gi|295796432|gb|ADG31222.1| recombination protein RecR [Thiomonas intermedia K12] Length = 203 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ LI L +PG GP+SA R HL++ + +A A+ V C+ C + Sbjct: 10 PALDALIDALRHLPGVGPKSASRMAYHLLEHDREAAQHIARALDAALGAVQRCTRCNTLT 69 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C+IC D +RDA + VVE ADL A+E++ + LY VL G +SPLD +GP++IG+ Sbjct: 70 EDAVCSICADPRRDARQLCVVESPADLAAVEQTLTYHGLYFVLMGRISPLDGLGPKEIGL 129 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L+ R + E+I A + T EG+ TAH I + L+ +++TRLA G+P G+EL+Y+D Sbjct: 130 DRLMTRALDGAVEEVILATNFTNEGEATAHVIAETLRPRGLRVTRLARGVPAGAELEYVD 189 Query: 188 DGTIFEAIRSRT 199 GTI A+ R Sbjct: 190 LGTIARALVDRR 201 >gi|238853619|ref|ZP_04643988.1| recombination protein RecR [Lactobacillus gasseri 202-4] gi|238833763|gb|EEQ26031.1| recombination protein RecR [Lactobacillus gasseri 202-4] Length = 199 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + E + ++++ + + CSICGN Sbjct: 3 YPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCSICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + +DPC IC D RD S I+VVE D+ A E N LYHVL G LSP+D +GPE+I Sbjct: 63 ITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPEEI 122 Query: 126 GIQSLIERIE-VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I+SLI R++ +++E+I A++++ EG+ TA Y+ +K +K+T LA G+ +GS+++ Sbjct: 123 NIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTHLAAGLAVGSDIE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 Y + T+ A++ RT L Sbjct: 183 YANSITLKRAVQGRTDL 199 >gi|146298126|ref|YP_001192717.1| recombination protein RecR [Flavobacterium johnsoniae UW101] gi|189029362|sp|A5FN24|RECR_FLAJO RecName: Full=Recombination protein recR gi|146152544|gb|ABQ03398.1| recombination protein RecR [Flavobacterium johnsoniae UW101] Length = 206 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 122/198 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K IE + ++++PG G R+A R LHL+K+ ++ G L++A+ N+ + C Sbjct: 1 MEFSSKLIEKAVNEMSQLPGIGKRTALRLVLHLLKQPKEQTGFLSQALLNMREDIKFCEN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T C IC + R+ I VVED+ D+ A+E + +YHVLGG +SP++ +GP Sbjct: 61 CHNISDTKVCEICANSVRNHQTICVVEDIRDVMAIENTGQYKGIYHVLGGKISPIEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I SL+E+++ K+ E+IFA+S+T+EG TT YI ++ ++ I+ +A GI +G E Sbjct: 121 SQLNISSLVEKVKSGKVVEIIFALSSTMEGDTTNFYIYKQIAESEIIISTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ +I R Sbjct: 181 LEYADEITLGRSILHRVP 198 >gi|257454438|ref|ZP_05619700.1| recombination protein RecR [Enhydrobacter aerosaccus SK60] gi|257448204|gb|EEV23185.1| recombination protein RecR [Enhydrobacter aerosaccus SK60] Length = 202 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 120/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + L+K L +PG GP+SA+R LHL+ K L EA+ + + C +C Sbjct: 1 MLTPKFDELVKQLKVLPGVGPKSAQRMALHLLSYKRPQGQALGEALIVAMHDIKQCQVCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C IC D +R+ V+ +VE AD+ A+E++ N Y VLGG LSP+D IG E Sbjct: 61 GLSDEDICPICSDPRRNERVLCIVETAADMMAIEQTAGFNGKYFVLGGHLSPIDGIGVEQ 120 Query: 125 IGIQSLIERIEVKK-----IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GI LI ++ + + E+I A S T+EGQTTAH+I + +K I+R+A GIPM Sbjct: 121 LGINQLIGLLKQHQAAQTPVEEIILATSTTVEGQTTAHFISEAVKPYVTHISRIAQGIPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G EL+YLD T+ +A+++R L Sbjct: 181 GGELEYLDSMTLGQALQNRGRL 202 >gi|56698391|ref|YP_168764.1| recombination protein RecR [Ruegeria pomeroyi DSS-3] gi|73621515|sp|Q5LMJ4|RECR_SILPO RecName: Full=Recombination protein recR gi|56680128|gb|AAV96794.1| recombination protein RecR [Ruegeria pomeroyi DSS-3] Length = 198 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + K+I+ LI+++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN Sbjct: 4 STKDIDALIELMARLPGLGPRSARRAVLHLIRKRALLLTPLADLMGQVAATARECLNCGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V T+D C IC D++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ Sbjct: 64 VGTSDICDICTDERRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDGVGPDEL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L +R+ + I E+I A++ATI+GQTTAHYI D+L G V++T LA G+P+G ELDY Sbjct: 124 RIPRLADRVTAEAISEVILALNATIDGQTTAHYIADQLGGR-VRLTSLAQGVPIGGELDY 182 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R L Sbjct: 183 LDDGTISAAMRARKEL 198 >gi|241765308|ref|ZP_04763286.1| recombination protein RecR [Acidovorax delafieldii 2AN] gi|241364989|gb|EER59900.1| recombination protein RecR [Acidovorax delafieldii 2AN] Length = 196 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 82/194 (42%), Positives = 117/194 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++ LI+ L R+PG G +SA+R HL++ LA A+ + V C++C Sbjct: 3 STNSLDVLIQALRRLPGVGIKSAQRMAFHLLQHDRAGAQALARALDDAVGSVRHCALCHT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD IGP++I Sbjct: 63 FTQAEVCSTCLDPARDASRLCVVETPADQSALERTGAYKGLYFVLMGRLSPLDGIGPKEI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+Q L+ER ++E+I A + EG+ TAH I + LK + +TRLA G+P+GSEL+Y Sbjct: 123 GLQKLMERSTNGVVQEVILATNFNAEGEATAHVIGEALKSRGLHVTRLARGVPVGSELEY 182 Query: 186 LDDGTIFEAIRSRT 199 +D GTI A+ R Sbjct: 183 VDLGTIAHALVDRR 196 >gi|294340546|emb|CAZ88931.1| Recombination protein recR [Thiomonas sp. 3As] Length = 203 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ LI L +PG GP+SA R HL++ + +A A+ V C+ C + Sbjct: 10 PALDALIDALRHLPGVGPKSASRMAYHLLEHDREAAQHIARALDAALGAVQRCARCNTLT 69 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C+IC D +RDA + VVE ADL A+E++ + LY VL G +SPLD +GP++IG+ Sbjct: 70 EDAVCSICADPRRDARQLCVVESPADLAAVEQTLTYHGLYFVLMGRISPLDGLGPKEIGL 129 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L+ R + E+I A + T EG+ TAH I + L+ +++TRLA G+P G+EL+Y+D Sbjct: 130 DRLMTRALDGAVEEVILATNFTNEGEATAHVIAETLRPRGLRVTRLARGVPAGAELEYVD 189 Query: 188 DGTIFEAIRSRT 199 GTI A+ R Sbjct: 190 LGTIARALVDRR 201 >gi|163789127|ref|ZP_02183570.1| recombination protein RecR [Flavobacteriales bacterium ALC-1] gi|159875540|gb|EDP69601.1| recombination protein RecR [Flavobacteriales bacterium ALC-1] Length = 205 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 125/198 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +EN + +A++PG G R+A R LHL+++ E L+EA++ + ++ C Sbjct: 1 MEFSSKLLENAVNEMAQLPGIGKRTALRLVLHLLRQPENQTFQLSEALSKVRGEINFCKS 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + R+ +I VVED+ D+ A+E + + LYHVLGG +SP+D IGP Sbjct: 61 CHNISDKPLCEICENPNRNTQLICVVEDIRDVMAVENTSSFKGLYHVLGGKISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SL+E+++ +++ELIFA+S T+EG TT YI +++ +V + +A G+ G+E Sbjct: 121 QDLNIMSLVEKVKTGQVKELIFAMSPTMEGDTTNFYIFRQIQDYNVATSTIARGVAAGNE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y D+ T+ +I R Sbjct: 181 LEYTDEITLGRSIIDRVP 198 >gi|207723142|ref|YP_002253541.1| recombination protein RecR [Ralstonia solanacearum MolK2] gi|207743466|ref|YP_002259858.1| recombination protein recr [Ralstonia solanacearum IPO1609] gi|206588336|emb|CAQ35299.1| recombination protein recr [Ralstonia solanacearum MolK2] gi|206594863|emb|CAQ61790.1| recombination protein recr [Ralstonia solanacearum IPO1609] Length = 207 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 67 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207 >gi|212212866|ref|YP_002303802.1| recombination protein RecR [Coxiella burnetii CbuG_Q212] gi|212011276|gb|ACJ18657.1| recombination protein [Coxiella burnetii CbuG_Q212] Length = 201 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 124/195 (63%), Gaps = 1/195 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLV-KKKEQLLGPLAEAMANIYNKVCLCSIC 63 + + LI+ L +PG GP+SA+R HL+ K + L++A+ + +V C +C Sbjct: 1 MFSPLTKQLIEALQCLPGIGPKSAQRMAFHLLAKSGQAKGLALSDALQSAIRQVGECKLC 60 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 C IC + +RD++++ VVE AD+ A+E+++ + Y V G LSPLD IGP+ Sbjct: 61 QIYTEQPLCNICNNPKRDSTLLCVVESPADVVAIEQTQIYSGRYFVFHGHLSPLDGIGPQ 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 +IGI +L++R+ + I+ELI A +AT+EG+ TAHY+ + + +K +R+A+G+PMG EL Sbjct: 121 EIGIPALLDRLRNETIKELIIATNATMEGKATAHYVANHIDHTKIKCSRIAHGVPMGGEL 180 Query: 184 DYLDDGTIFEAIRSR 198 +YLD GT+ A+ SR Sbjct: 181 EYLDGGTLIHALHSR 195 >gi|312882072|ref|ZP_07741822.1| recombination protein RecR [Vibrio caribbenthicus ATCC BAA-2122] gi|309370208|gb|EFP97710.1| recombination protein RecR [Vibrio caribbenthicus ATCC BAA-2122] Length = 189 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R HL+++ + LA+A++ ++ CS C + C Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQAMTEIGHCSECRTFTEQEICH 60 Query: 74 ICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ L Sbjct: 61 ICTNPKRQENGQICVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDVLDY 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R+ + E+I A + T+EG+ TAHYI + + V+ +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLRRGDVSEVILATNPTVEGEATAHYIAELCREHSVEASRIAHGVPVGGELELVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R + Sbjct: 181 HSLLGRHKI 189 >gi|325925318|ref|ZP_08186721.1| DNA replication and repair protein RecR [Xanthomonas perforans 91-118] gi|325544309|gb|EGD15689.1| DNA replication and repair protein RecR [Xanthomonas perforans 91-118] Length = 197 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 113/194 (58%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI+ +PG G +SA+R H+++++ + LA A+ N KV C C + Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVEKVGHCVQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 ++ C+IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G Sbjct: 62 TESEICSICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|330445439|ref|ZP_08309091.1| recombination protein RecR [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489630|dbj|GAA03588.1| recombination protein RecR [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 189 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R L+++ Q LA+A++ ++ C C D CA Sbjct: 1 MEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLADALSQAMTEIGHCRDCRTFTEDDVCA 60 Query: 74 ICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R +I VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ L E Sbjct: 61 ICDNPRRQENGLICVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDRLEE 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R++ + I ELI A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLQQETISELILATNPTVEGEATAHYIAELCREYGVPASRIAHGVPVGGELELVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R L Sbjct: 181 HSLAGRQRL 189 >gi|88658065|ref|YP_507639.1| recombination protein RecR [Ehrlichia chaffeensis str. Arkansas] gi|123492997|sp|Q2GFZ4|RECR_EHRCR RecName: Full=Recombination protein recR gi|88599522|gb|ABD44991.1| recombination protein RecR [Ehrlichia chaffeensis str. Arkansas] Length = 195 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 84/193 (43%), Positives = 132/193 (68%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + A++P FGP S+RR LHL++ KE+++ PLA + ++ + C +C N+D Sbjct: 2 DINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNIDV 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + + Sbjct: 62 KSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLD 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 S++ERI+ ++E+I I T++GQ T HYI +K + +K+TRLA GIPMG E+DYLD+ Sbjct: 122 SIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELGIKVTRLACGIPMGGEIDYLDE 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR ++ Sbjct: 182 GTLSAALSSRYII 194 >gi|91206053|ref|YP_538408.1| recombination protein RecR [Rickettsia bellii RML369-C] gi|157826581|ref|YP_001495645.1| recombination protein RecR [Rickettsia bellii OSU 85-389] gi|122425241|sp|Q1RH45|RECR_RICBR RecName: Full=Recombination protein recR gi|172047817|sp|A8GUU1|RECR_RICB8 RecName: Full=Recombination protein recR gi|91069597|gb|ABE05319.1| Recombination protein RecR [Rickettsia bellii RML369-C] gi|157801885|gb|ABV78608.1| recombination protein RecR [Rickettsia bellii OSU 85-389] Length = 200 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 125/195 (64%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 EI+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C +CGN Sbjct: 4 NNNEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKTLINNLTEIDKKIVKCQVCGN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +DT + C IC + RD SVI +VE VA+LWA+ERS LYHVLG +LS R P + Sbjct: 64 MDTENICGICTSEYRDKSVIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSIL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDY Sbjct: 124 RLPELLDRCFKENIKEVIIATNSTLEGQTTAYFITEYLKDHPAKISRLASGIPIGGELDY 183 Query: 186 LDDGTIFEAIRSRTV 200 LD+GT+ AI R Sbjct: 184 LDEGTLSAAINLRQP 198 >gi|269103100|ref|ZP_06155797.1| recombination protein RecR [Photobacterium damselae subsp. damselae CIP 102761] gi|268162998|gb|EEZ41494.1| recombination protein RecR [Photobacterium damselae subsp. damselae CIP 102761] Length = 190 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R L+++ Q LAEA+ + ++ C C D CA Sbjct: 1 MEALRCLPGVGPKSAQRMAFSLLQRNRQGGLQLAEALNHAMTEIGHCRDCRTFTEDDICA 60 Query: 74 ICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R ++ VVE AD+ A+E + + Y VL G LSPLD IGP DIG+ +L Sbjct: 61 ICDNPRRKENGIVCVVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLEF 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R++ + I ELI A + T+EG+ TAHYI + + V +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLQNEAISELILATNPTVEGEATAHYIAELCQEYGVPASRIAHGVPVGGELELVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R L Sbjct: 181 HSLAGRQKL 189 >gi|296141675|ref|YP_003648918.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162] gi|296029809|gb|ADG80579.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162] Length = 215 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++ LI LA++PG GPR A+R HL+ + + L A+ + + V C +CG Sbjct: 1 MYEGPVQELIDELAKLPGVGPRGAQRIAFHLLGAQPSEIDRLTHALTRVRDDVRYCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RDAS I VVE+ D+ A+ER++ LYHVLGG+L+P+ IGP+ Sbjct: 61 NVSADVRCRICSDSRRDASKICVVEEAKDVQAVERTREYRGLYHVLGGALNPIKAIGPDK 120 Query: 125 IGIQSLIER----IEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ R ++ ++ E+I A EG+ TA +++ LK + +TR A G+PM Sbjct: 121 LRIRELLVRLGAAVDGVEVDEVIIATDPNTEGEATAAFLVRMLKDFPGLTVTRPAAGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G+EL++ D+ T+ A+ R L Sbjct: 181 GAELEFADELTLGRAMSGRRSL 202 >gi|26990958|ref|NP_746383.1| recombination protein RecR [Pseudomonas putida KT2440] gi|148546839|ref|YP_001266941.1| recombination protein RecR [Pseudomonas putida F1] gi|37999624|sp|Q88F32|RECR_PSEPK RecName: Full=Recombination protein recR gi|166221956|sp|A5W0U7|RECR_PSEP1 RecName: Full=Recombination protein recR gi|24985981|gb|AAN69847.1|AE016623_9 recombination protein RecR [Pseudomonas putida KT2440] gi|148510897|gb|ABQ77757.1| DNA replication and repair protein RecR [Pseudomonas putida F1] gi|313497893|gb|ADR59259.1| RecR [Pseudomonas putida BIRD-1] Length = 200 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEQELCPQCADPRRDDTQLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 122 GIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLVASRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ A R + Sbjct: 182 MVDGGTLAHAFAGRRPI 198 >gi|42527057|ref|NP_972155.1| recombination protein RecR [Treponema denticola ATCC 35405] gi|73621527|sp|Q73MF9|RECR_TREDE RecName: Full=Recombination protein recR gi|41817481|gb|AAS12066.1| recombination protein RecR [Treponema denticola ATCC 35405] Length = 195 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 112/192 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I+ +I +R+PG G +SA R HL+K+ LAEA++ ++ K+ C+ICG+ Sbjct: 3 AIDAVIDSFSRLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEKIHPCTICGSYTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C+IC D+ RD + I VV D+ + L+HVLGG ++PL+ IGP+ + I Sbjct: 63 DEICSICADETRDRATICVVGFPQDVNTISSIPEYRGLFHVLGGLIAPLEGIGPDQLHIS 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI RI I E+I A + TIEG TTA YI L+ + V ITRLA G+P+G +L+Y D Sbjct: 123 ELIRRIHEGGITEVILATNPTIEGDTTALYIQKILQDLPVNITRLASGLPVGGDLEYADR 182 Query: 189 GTIFEAIRSRTV 200 T+ ++ R Sbjct: 183 LTLARSLNGRIK 194 >gi|224368755|ref|YP_002602916.1| recombination protein RecR [Desulfobacterium autotrophicum HRM2] gi|259563692|sp|C0QAG9|RECR_DESAH RecName: Full=Recombination protein recR gi|223691471|gb|ACN14754.1| RecR [Desulfobacterium autotrophicum HRM2] Length = 199 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 115/197 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + I NLIK L+ +PG G R+A R LH++ LA + + KV LC Sbjct: 1 MDLYPESILNLIKSLSTLPGIGRRTAERLALHILHAPLHEAQTLANDILELKQKVTLCRT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ C IC + +RDAS+I VVE D+ A+E+S A + LYHVLGG+LSP+D IGP Sbjct: 61 CFSLSDQPECRICSNPRRDASIICVVEKPTDIVAIEKSGAFSGLYHVLGGALSPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I+ L R K E+I A +EG+ TA YI D+L+ V +TR+A G+PMG + Sbjct: 121 DELRIRELFSRACSKTTTEVIIATGTNVEGEATAAYISDQLRKKGVNVTRIASGVPMGGD 180 Query: 183 LDYLDDGTIFEAIRSRT 199 Y+D T+ A+ R Sbjct: 181 FQYVDQVTMQRAMEGRR 197 >gi|253698847|ref|YP_003020036.1| recombination protein RecR [Geobacter sp. M21] gi|259563697|sp|C6E8Y9|RECR_GEOSM RecName: Full=Recombination protein recR gi|251773697|gb|ACT16278.1| recombination protein RecR [Geobacter sp. M21] Length = 197 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 125/196 (63%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L+ L ++PG G +SA R HL+K + LA+++ + +V LCS+C Sbjct: 4 FSGSLTRLVGELKKLPGVGEKSALRLAFHLLKHPNN-IEALAQSLLQVGERVHLCSVCFA 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC +RD+ I VVE+ DL ALERS+A YHVL G+LSPL+ + P+D+ Sbjct: 63 ITEDDPCWICS-GERDSGTICVVEEPQDLMALERSRAFGGRYHVLQGALSPLNGVTPKDL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++RE++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y Sbjct: 122 RIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRMIKPLSIKVTRLAHGIPVGSDLEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A+ R+ L Sbjct: 182 VDAATVQRAVEGRSEL 197 >gi|86140178|ref|ZP_01058740.1| recombination protein RecR [Roseobacter sp. MED193] gi|85823115|gb|EAQ43328.1| recombination protein RecR [Roseobacter sp. MED193] Length = 199 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 104/201 (51%), Positives = 145/201 (72%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M EIE+LI ++A++PG GPRSARRA LHL++K+ LL PLAE+++ + + C Sbjct: 1 MNDDSIS-EIEHLIALMAKLPGMGPRSARRAVLHLIRKRTLLLTPLAESLSQVASSAREC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNV T D C IC D++R I VVE V+DLWA+ER+ + YHVLGG+LS LD I Sbjct: 60 LNCGNVGTQDICGICSDERRANGEICVVETVSDLWAMERAASFKGRYHVLGGTLSALDAI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+++ I L++R+ + +RE+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G Sbjct: 120 GPDELRIPRLVDRVASEGVREVILALNATIDGQTTAHYIADQLEG-QVQLTTLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLDDGTI A+++R L Sbjct: 179 GELDYLDDGTIIAALKARKTL 199 >gi|206890014|ref|YP_002248896.1| recombination protein RecR [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741952|gb|ACI21009.1| recombination protein RecR [Thermodesulfovibrio yellowstonii DSM 11347] Length = 197 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +ENLI+ L ++PG G ++A+R ++ E +AEA+ N+ K CS+C N+ Sbjct: 2 SNPLENLIENLCKLPGIGRKTAQRLAFFIMNMPENEALEIAEAIINLKKKAKFCSVCFNI 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC + RD S+I VVE+ +++ E++ +YHVLGG++SP+D + P+ + Sbjct: 62 TENEKCNICSNSIRDHSIICVVEEPSNIILFEKTG-YKGVYHVLGGNISPVDGLTPDKLK 120 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I+ L ER++ +IRE+I + S +G+ TA +I D LK +VKI+R+AYG+P+G ++++ Sbjct: 121 IKELEERVKTGQIREVIISTSPNTKGELTAQWIADLLKKYNVKISRIAYGLPIGIDIEFA 180 Query: 187 DDGTIFEAIRSRTV 200 D+ T+ +A+ R Sbjct: 181 DEVTLSKALEGRKP 194 >gi|53804578|ref|YP_113788.1| recombination protein RecR [Methylococcus capsulatus str. Bath] gi|73621498|sp|Q609A9|RECR_METCA RecName: Full=Recombination protein recR gi|53758339|gb|AAU92630.1| recombination protein RecR [Methylococcus capsulatus str. Bath] Length = 198 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 77/191 (40%), Positives = 114/191 (59%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I LI+ L +PG GP++A+R TLHL+++ G L+EA+ KV LC+ C + Sbjct: 6 AIAELIEALRCLPGVGPKTAQRMTLHLLQRDRDAAGRLSEALRQALEKVGLCAQCRTLTE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C C RD S++ +VE A++ A+ RS L+ VL G LSPLD IGPE++G+ Sbjct: 66 HSLCEYCASPGRDRSLLCIVESPAEVLAISRSTGYKGLFFVLNGRLSPLDGIGPEELGLD 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +R++ + ELI A + T+EG+ TAHY+ D + V+ TR+A+GIP G EL+Y+D Sbjct: 126 VLEQRLKDDGVAELILATNTTVEGEATAHYLSDMARRHGVRTTRIAHGIPFGGELEYVDG 185 Query: 189 GTIFEAIRSRT 199 T+ A R Sbjct: 186 ATLSHAFDGRK 196 >gi|325274400|ref|ZP_08140489.1| recombination protein RecR [Pseudomonas sp. TJI-51] gi|324100472|gb|EGB98229.1| recombination protein RecR [Pseudomonas sp. TJI-51] Length = 200 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEQDLCPQCADPRRDDTQLCVVEGPTDVYAVEQAG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 122 GIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLNEKGLVASRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ A R + Sbjct: 182 LVDGGTLAHAFAGRRPI 198 >gi|118594961|ref|ZP_01552308.1| recombination protein RecR [Methylophilales bacterium HTCC2181] gi|118440739|gb|EAV47366.1| recombination protein RecR [Methylophilales bacterium HTCC2181] Length = 198 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 123/192 (64%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +++L+ L +PG GP+SA R +L+++ + L+++++N ++ C +C + Sbjct: 7 LQSLVDALKCLPGVGPKSALRLAYYLLQRNRKGADTLSQSISNALEQLGHCKLCNDFTEQ 66 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC Q+RD I +VE +DL +E++ + +Y VL G LSPLD +GP++I + Sbjct: 67 EVCKICSSQKRDVHTICIVEMPSDLLMMEQTHSYKGMYFVLMGRLSPLDGVGPKEIHLDR 126 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 LIERI+ +IRE+I A + T EG TA YI + LKG ++K+TR+A G+PMG E++Y+D G Sbjct: 127 LIERIKSSEIREIILATNFTAEGNATAQYIKELLKGAEIKMTRIARGLPMGGEIEYIDSG 186 Query: 190 TIFEAIRSRTVL 201 T+ +A+ R L Sbjct: 187 TLAQAVVERKQL 198 >gi|83855099|ref|ZP_00948629.1| recombination protein RecR [Sulfitobacter sp. NAS-14.1] gi|83842942|gb|EAP82109.1| recombination protein RecR [Sulfitobacter sp. NAS-14.1] Length = 197 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 103/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN Sbjct: 3 STRDIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLTPLADMMQTVAATARECINCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V T D C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ Sbjct: 63 VGTADICDICTSEKRANGEICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLLDRVRDEAVSEVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R + Sbjct: 182 LDDGTITAAMRARKSI 197 >gi|299531589|ref|ZP_07044994.1| recombination protein RecR [Comamonas testosteroni S44] gi|298720305|gb|EFI61257.1| recombination protein RecR [Comamonas testosteroni S44] Length = 196 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 80/192 (41%), Positives = 118/192 (61%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C Sbjct: 5 QSLDALIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C+IC D RD + + VVE ADL A+ER+ A Y+VL G LSPLD +GP++IG+ Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTGAYQGYYYVLMGRLSPLDGVGPKEIGM 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ER ++E+I A S T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAVSEALKSRGILVTRLARGVPIGSELEYVD 184 Query: 188 DGTIFEAIRSRT 199 GTI A+ R Sbjct: 185 LGTIAHALVDRR 196 >gi|289662389|ref|ZP_06483970.1| recombination protein RecR [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669154|ref|ZP_06490229.1| recombination protein RecR [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 197 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 112/194 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI+ +PG G +SA+R H+++++ + LA +AN KV C C + Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 ++ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|73666876|ref|YP_302892.1| RecR protein [Ehrlichia canis str. Jake] gi|123615050|sp|Q3YSL1|RECR_EHRCJ RecName: Full=Recombination protein recR gi|72394017|gb|AAZ68294.1| RecR protein [Ehrlichia canis str. Jake] Length = 195 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 134/193 (69%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + A++P FGP S+RR LHL++ KE+++ PLA + ++ + CS+C N+D Sbjct: 2 DINKLINMFAKLPNFGPSSSRRIVLHLLRNKEEVMLPLASGIQDLAFQTKECSVCFNIDV 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + + Sbjct: 62 KSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLD 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +++ERI+ I+E+I I T++GQ T HYI +KG+ +KITRLA GIPMG E+DYLD+ Sbjct: 122 NIVERIKKFDIKEVIIGIGNTMDGQVTTHYITQIVKGLGIKITRLACGIPMGGEIDYLDE 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR V+ Sbjct: 182 GTLSAALSSRYVI 194 >gi|325846731|ref|ZP_08169646.1| recombination protein RecR [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481489|gb|EGC84530.1| recombination protein RecR [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 199 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 126/199 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI+ ++P G +SA R + +V K ++ + ++A+ + +K+ C I Sbjct: 1 MALYPESLIKLIEQFQKLPTIGKKSAERLAMSIVGKDDESVEDFSKALLEVKSKIHPCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ + C IC D R+ ++I V+EDV +L+A+E+S + YH+LGG +SP D + Sbjct: 61 CGNLTEDEICGICKDVSREENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ED+ I L++RI+ + I+E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS Sbjct: 121 EDLSIDKLLDRIDKENIKEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYFDQLTLERALEDRREI 199 >gi|313673334|ref|YP_004051445.1| DNA replication and repair protein recr [Calditerrivibrio nitroreducens DSM 19672] gi|312940090|gb|ADR19282.1| DNA replication and repair protein RecR [Calditerrivibrio nitroreducens DSM 19672] Length = 200 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 122/198 (61%), Gaps = 1/198 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I K + IK L+++PG G ++A R ++ L+K ++ + +A A+ ++ C CG Sbjct: 2 IYSKSFDRCIKELSKLPGIGKKTALRLSMQLLKMNQKDVEDIANAIIDLKKNTKFCIRCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC D RD +I VVE+ D++ +E S N +YHVLGG L+PLD I P+D Sbjct: 62 AMAEGEVCPICTDNNRDKQIICVVEEAKDVFLIEVSGKYNGVYHVLGGRLAPLDGINPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSEL 183 + I+ L+ERI +++E+I A + +EG TTA ++ + K D+K+TR+A G+P+G L Sbjct: 122 LRIKELLERIREDQVKEVILATNPDVEGDTTAIFLKKLISKNFDIKVTRIATGVPIGGYL 181 Query: 184 DYLDDGTIFEAIRSRTVL 201 +Y D+ TI +++ +R + Sbjct: 182 EYTDEITILKSLENRREM 199 >gi|305667757|ref|YP_003864044.1| recombination protein RecR [Maribacter sp. HTCC2170] gi|88707594|gb|EAQ99836.1| recombination protein RecR [Maribacter sp. HTCC2170] Length = 206 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 128/196 (65%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++++PG G R+A R LHL+K+ + L+ A+ ++ N V C+ Sbjct: 1 MDFSSKLLENAVYEMSQLPGIGKRTALRLVLHLLKQPTEQTMKLSVALQDLRNTVKFCAN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC + +RD S++ VVED+ D+ A+E + LYHVLGG +SP++ +GP Sbjct: 61 CHNISDVELCEICANPKRDESIVCVVEDIRDVMAIENTGQFKGLYHVLGGKISPMEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I SL+ + + KI+E+IFA+S+T+EG TT YI +L+G+D+ + +A GI +G E Sbjct: 121 QELTISSLVSKAKEGKIKEMIFALSSTMEGDTTNFYIYKQLQGLDIATSTIARGIAIGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSILNR 196 >gi|300113233|ref|YP_003759808.1| recombination protein RecR [Nitrosococcus watsonii C-113] gi|299539170|gb|ADJ27487.1| recombination protein RecR [Nitrosococcus watsonii C-113] Length = 199 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 120/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + G + LI+ L +PG GP+SA+R +L++ + LA+A+ +K+ C Sbjct: 1 MSLFGLSLGRLIEALCCLPGVGPKSAQRMAFYLLESNREGGQRLAQALLEALDKMTHCQT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + TD C++C D +RD + VVE +D+ A+E++ Y VL G LSPLD +GP Sbjct: 61 CRILSETDLCSLCADSRRDHGQLCVVEMPSDVQAIEQATNYAGRYFVLMGHLSPLDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E +G+ L +R++ +IRE+I A + T+EG+ TA+YI + + + TR+A+G+P+G E Sbjct: 121 EALGMDLLAKRLDTDQIREVILATNLTVEGEATAYYISELAQTRGITTTRIAHGVPLGGE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+++D T+ A +SR L Sbjct: 181 LEFIDSNTLSHAFQSRQHL 199 >gi|264677768|ref|YP_003277674.1| recombination protein RecR [Comamonas testosteroni CNB-2] gi|262208280|gb|ACY32378.1| recombination protein RecR [Comamonas testosteroni CNB-2] Length = 196 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 80/192 (41%), Positives = 118/192 (61%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C Sbjct: 5 QSLDTLIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C+IC D RD + + VVE ADL A+ER+ A Y+VL G LSPLD +GP++IG+ Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTGAYQGYYYVLMGRLSPLDGVGPKEIGM 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ER ++E+I A S T EG+ TAH + + LK + +TRLA G+P+GSEL+Y+D Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAVSEALKSRGILVTRLARGVPIGSELEYVD 184 Query: 188 DGTIFEAIRSRT 199 GTI A+ R Sbjct: 185 LGTIAHALVDRR 196 >gi|77166053|ref|YP_344578.1| RecR protein [Nitrosococcus oceani ATCC 19707] gi|254436341|ref|ZP_05049847.1| recombination protein RecR [Nitrosococcus oceani AFC27] gi|123593516|sp|Q3J7Z8|RECR_NITOC RecName: Full=Recombination protein recR gi|76884367|gb|ABA59048.1| DNA replication and repair protein RecR [Nitrosococcus oceani ATCC 19707] gi|207088031|gb|EDZ65304.1| recombination protein RecR [Nitrosococcus oceani AFC27] Length = 199 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 122/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + G + L++ L +PG GP+SA+R HL++ + LA+A+ +K+ C Sbjct: 1 MSLFGLSLGRLLEALRCLPGVGPKSAQRMAFHLLESDREGGRHLAQALLEALDKMTHCQT 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + TD C++C D +RD + VVE +D+ A+E++ + + Y VL G LSPLD +GP Sbjct: 61 CRILSETDLCSLCADSRRDRGQLCVVEMPSDVQAIEQATSYSGRYFVLMGHLSPLDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E +G+ L +R++ +IRE+I A + T+EG+ TA+YI + + + TR+A+G+P+G E Sbjct: 121 EALGMDLLAKRLDTDQIREVILATNLTVEGEATAYYISELAQTRGITTTRIAHGVPLGGE 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+++D T+ A +SR L Sbjct: 181 LEFIDSNTLSHAFQSRRHL 199 >gi|156339807|ref|XP_001620267.1| hypothetical protein NEMVEDRAFT_v1g223282 [Nematostella vectensis] gi|156204949|gb|EDO28167.1| predicted protein [Nematostella vectensis] Length = 205 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 124/196 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++R+PG G R+A R LHL+K+ + G LAEA+ + C Sbjct: 1 MDFSSKLLENAVNEVSRLPGIGKRTALRLVLHLLKQPAEHTGYLAEAITQFRTTIKSCEK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T C IC + R++ ++ VVED+ D+ A+E + LYHVLGG +SP++ IGP Sbjct: 61 CHNISDTVLCEICNNPNRNSEIVCVVEDIRDVMAIESTAQFRGLYHVLGGKISPIEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I+SL+E++ +++ELIFA+S+T+EG TT YI +++ ++ + +A GI +G E Sbjct: 121 HNLQIESLVEKVANGEVKELIFALSSTMEGDTTNFYIFKQIEKYNIITSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSIVNR 196 >gi|52842955|ref|YP_096754.1| recombination protein RecR [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|73621495|sp|Q5ZRX0|RECR_LEGPH RecName: Full=Recombination protein recR gi|52630066|gb|AAU28807.1| recombinational DNA repair protein RecR [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 199 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 120/197 (60%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 +T + L++ L +PG GP+SA+R HL++ + Q LA + + C C Sbjct: 1 MTMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N CA+C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+D Sbjct: 61 NYTEQTLCALCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL+ Sbjct: 121 IGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 +LD TI A+++R V+ Sbjct: 181 FLDGNTISSALKNRAVI 197 >gi|262165294|ref|ZP_06033031.1| recombination protein RecR [Vibrio mimicus VM223] gi|262025010|gb|EEY43678.1| recombination protein RecR [Vibrio mimicus VM223] Length = 190 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C D C Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQDVCH 60 Query: 74 ICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ +L Sbjct: 61 ICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLDY 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R L Sbjct: 181 HSLLGRHKL 189 >gi|196231422|ref|ZP_03130281.1| recombination protein RecR [Chthoniobacter flavus Ellin428] gi|196224758|gb|EDY19269.1| recombination protein RecR [Chthoniobacter flavus Ellin428] Length = 203 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 114/199 (57%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ I+ LI L R+PG GPRSA R L +++ ++ ++ + + + C Sbjct: 1 MKRIAYPAAIQALIGELKRLPGIGPRSAERIALWMLQSRDARPLEVSRVIREVQESIHAC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG T C IC D RDA+ I VVE D+ LER+ YH LGG +SPLD + Sbjct: 61 PRCGFFTTDTLCEICADTTRDAAQICVVEQPTDILPLERTGVFLGRYHALGGRISPLDHV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE++ I +LIERI+ + E+I A+ + +EG+ TA+Y+ L+ + V +TRLA G+P G Sbjct: 121 GPEELRIDALIERIKAEAPSEIILALGSDVEGEATANYLATLLRELPVTVTRLAQGLPAG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 L+ D+ T+ A+ RT Sbjct: 181 GGLEQADELTLSRALAGRT 199 >gi|83815474|ref|YP_446653.1| recombination protein RecR [Salinibacter ruber DSM 13855] gi|294508588|ref|YP_003572647.1| Recombination protein recR [Salinibacter ruber M8] gi|123527969|sp|Q2RZH8|RECR_SALRD RecName: Full=Recombination protein recR gi|83756868|gb|ABC44981.1| recombination protein RecR [Salinibacter ruber DSM 13855] gi|294344917|emb|CBH25695.1| Recombination protein recR [Salinibacter ruber M8] Length = 237 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 37/233 (15%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + T + +E L++ ++P G ++ARR +++K ++ + +A A+ ++ V CS Sbjct: 1 MQYTSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTSVKEDVQRCST 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C V DPC IC +RDAS I VVE+ +DL A+E++ +YHVLGG +SPLD +GP Sbjct: 61 CYVVADQDPCPICGSDKRDASTICVVEESSDLTAIEQTNEYRGVYHVLGGVISPLDGVGP 120 Query: 123 EDIGIQSLIERIEV-------------------------------------KKIRELIFA 145 +D+ + L RI+ + E+I A Sbjct: 121 DDLRVHELATRIDPSFEDTAADAAPEPNTTPDGEADAEAPPSENGGADEAESGVDEVILA 180 Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 ++ +EG TTA+YI L+ DV++TR+A G+P+G +L+Y D+ T+ A+ R Sbjct: 181 VNPNVEGDTTAYYISQLLEPFDVRVTRIARGLPIGGDLEYADEATLSRALEGR 233 >gi|110678387|ref|YP_681394.1| recombination protein RecR [Roseobacter denitrificans OCh 114] gi|122973002|sp|Q16BD5|RECR_ROSDO RecName: Full=Recombination protein recR gi|109454503|gb|ABG30708.1| recombination protein RecR [Roseobacter denitrificans OCh 114] Length = 197 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 138/195 (70%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + K+I+ LI ++A++PG GPRSARR LHL++K+ LL PLA+ + + C CGN Sbjct: 3 STKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V TTD C IC ++R + VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ Sbjct: 63 VGTTDVCDICTCEKRANGELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + I E+I A++ATI+GQTTAHYI D L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEG-QVRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI A+R+R Sbjct: 182 LDDGTITAAMRARKS 196 >gi|120611314|ref|YP_970992.1| recombination protein RecR [Acidovorax citrulli AAC00-1] gi|171769180|sp|A1TQI0|RECR_ACIAC RecName: Full=Recombination protein recR gi|120589778|gb|ABM33218.1| recombination protein RecR [Acidovorax citrulli AAC00-1] Length = 199 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 116/199 (58%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ L++ L R+PG G +SA+R HL++ Q L+ A+ + V C Sbjct: 1 MAPGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C + C+ C+D RDAS + VVE AD ALER+ A LY VL G LSPLD I Sbjct: 61 ARCHTFTEGEVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+DIG L+ER ++E+I A + T EG+ TAH + + LK + +TRLA G+P+G Sbjct: 121 GPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 SEL+Y+D GTI A+ R Sbjct: 181 SELEYVDLGTIAHALVDRR 199 >gi|159903630|ref|YP_001550974.1| RecR protein [Prochlorococcus marinus str. MIT 9211] gi|159888806|gb|ABX09020.1| RecR protein [Prochlorococcus marinus str. MIT 9211] Length = 182 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 77/181 (42%), Positives = 118/181 (65%), Gaps = 1/181 (0%) Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79 +PG GPR+A+R LHL+++ E+ + A A+ N N+V C C ++ + C IC++Q Sbjct: 1 MPGIGPRTAQRLALHLLRQPEERIKAFANALLNARNQVGQCQQCFHLTEGNECEICLNQN 60 Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139 R ++I VV D DL ALER++ LYHVLGG +SP+D IGPE + I L++RI ++ Sbjct: 61 RQRNLICVVADSRDLLALERTREYKGLYHVLGGLISPMDGIGPELLNISPLVKRITSEET 120 Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 E+I A++ ++EG TT+ Y+ L VK+TR+AYG+P+GSEL+Y D+ T+ A+ R Sbjct: 121 TEVILALTPSVEGDTTSLYLAKLLNAF-VKVTRIAYGLPVGSELEYADEVTLARALEGRR 179 Query: 200 V 200 Sbjct: 180 T 180 >gi|255028849|ref|ZP_05300800.1| recombination protein RecR [Listeria monocytogenes LO28] Length = 179 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 70/175 (40%), Positives = 112/175 (64%) Query: 26 RSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVI 85 +SA R +++ KE + A+A+ + + CS+CG++ DPC IC D RD SVI Sbjct: 4 KSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVI 63 Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145 VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI I L++R++ I E+I A Sbjct: 64 CVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILA 123 Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 + +EG+ TA YI LK +K+TR+A+G+P+G +L+Y D+ T+ +A+ R Sbjct: 124 TNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRRE 178 >gi|34497067|ref|NP_901282.1| recombination protein RecR [Chromobacterium violaceum ATCC 12472] gi|73621478|sp|Q7NXL4|RECR_CHRVO RecName: Full=Recombination protein recR gi|34102924|gb|AAQ59288.1| DNA repair DNA recombination zinc-finger protein [Chromobacterium violaceum ATCC 12472] Length = 198 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ +E LI L +PG GP++A+R HL+++ +Q LA A+ ++ C Sbjct: 1 MKN---PPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + CAIC D+ R + +VE ADL LE++K + LY VL G +SPLD I Sbjct: 58 QRCNTFSEAELCAICADETRRRDQLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNI 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ + L+ R ++ E++ A + T EG+ T+H + + K + +TR+A G+P+G Sbjct: 118 GPKDLHLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELFKERGLTVTRIARGMPVG 177 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL+Y+D GT+ +A+ R Sbjct: 178 GELEYVDLGTLAQAVYERR 196 >gi|83941622|ref|ZP_00954084.1| recombination protein RecR [Sulfitobacter sp. EE-36] gi|83847442|gb|EAP85317.1| recombination protein RecR [Sulfitobacter sp. EE-36] Length = 197 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 103/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++I+ LI ++AR+PG GPRSARRA LHL++K+ LL PLA+ M + C CGN Sbjct: 3 STRDIDALIDLMARLPGLGPRSARRAVLHLIRKRALLLTPLADMMQTVAATARECINCGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V T D C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD IGP+++ Sbjct: 63 VGTADICDICTSEKRANGEICVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAIGPQEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+ + + E+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G ELDY Sbjct: 123 RIPRLMDRVRDEAVSEVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIGGELDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+R+R + Sbjct: 182 LDDGTITAAMRARKSI 197 >gi|284928920|ref|YP_003421442.1| DNA replication and repair protein RecR [cyanobacterium UCYN-A] gi|284809379|gb|ADB95084.1| DNA replication and repair protein RecR [cyanobacterium UCYN-A] Length = 185 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 71/185 (38%), Positives = 116/185 (62%), Gaps = 1/185 (0%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76 + R+PG GP+SA+R +++K E + A+A+ N + LC+ C + C IC Sbjct: 1 MQRLPGIGPKSAQRLAFYILKLPESEVQAFAKALINAKQRTGLCTKCFHFSEKPICEICS 60 Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136 + RD+++I VV D D+ ALE+++ +YHVLGG +SP+D IGPE + ++ L+ R+ Sbjct: 61 NTNRDSNLICVVADSRDVIALEKTREYKGMYHVLGGIMSPIDGIGPEQLNVEPLVRRVSQ 120 Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196 + I+E+I AIS T+EG+T Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+ Sbjct: 121 ENIKEVILAISPTVEGETMTLYLCQVLKAF-TKVTRIAFGLPVGGDLEYTDEITLARALA 179 Query: 197 SRTVL 201 R L Sbjct: 180 GRQEL 184 >gi|170722748|ref|YP_001750436.1| recombination protein RecR [Pseudomonas putida W619] gi|229470339|sp|B1JBZ1|RECR_PSEPW RecName: Full=Recombination protein recR gi|169760751|gb|ACA74067.1| recombination protein RecR [Pseudomonas putida W619] Length = 200 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C C Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGVRLAQALSLAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GP+ I Sbjct: 63 LTEQELCPQCADTRRDDTQLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPDAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 G+ L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 122 GVPQLMARIEEQGSFTEVILATNPTVEGEATAHYIAQLLAEKGLVASRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ A R + Sbjct: 182 LVDGGTLAHAFAGRKPI 198 >gi|86133950|ref|ZP_01052532.1| recombination protein RecR [Polaribacter sp. MED152] gi|85820813|gb|EAQ41960.1| recombination protein RecR [Polaribacter sp. MED152] Length = 205 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 127/196 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + ++R+PG G R+A R LHL+K+ ++ L+EA+ ++ N V C Sbjct: 1 MDFSSKILENAVNEVSRLPGIGKRTALRLVLHLLKQPKENTSYLSEALLHLRNDVKSCEK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ T C IC + +R+ ++ VVED+ D+ A+E + LYHVLGG +SP++ IGP Sbjct: 61 CHNISDTVLCDICNNPKRNEEIVCVVEDIRDVMAIESTSQFKGLYHVLGGKISPIEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I+SL+ ++E I+ELIFA+S+T+EG TT YI +++ ++ + +A GI +G E Sbjct: 121 QNLQIESLVNKVEKGIIKELIFALSSTMEGDTTNFYIYKQIEKYNITTSTIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSIVNR 196 >gi|238899121|ref|YP_002924803.1| gap repair protein with type I DNA topoisomerase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259563699|sp|C4K7W2|RECR_HAMD5 RecName: Full=Recombination protein recR gi|229466881|gb|ACQ68655.1| gap repair protein with type I DNA topoisomerase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 202 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 113/193 (58%), Gaps = 1/193 (0%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 IE L++ L +PG GP+SA+R +L++ LAE++ +++ C +C Sbjct: 7 IEALMESLRHLPGVGPKSAQRMAFYLLQSDRSKGIRLAESLLKAMSEIGHCGVCRTFTEQ 66 Query: 70 DPCAICIDQQRDA-SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C IC + R+ I VVE +D+ A+E++ + Y VL G LSPLD IGP+DIG+ Sbjct: 67 PCCDICSNVYREKMGQICVVESPSDICAIEQTGQFSGRYFVLMGRLSPLDGIGPDDIGLP 126 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L R+ + I+E+I A++ T+EG+ T++YI + + T++A+G+P+G +L+ +D+ Sbjct: 127 LLEHRLSTEPIKEVILAMNPTVEGEATSNYIAQMCEEYGISTTKIAHGVPIGGDLEMVDE 186 Query: 189 GTIFEAIRSRTVL 201 T+ A+ R + Sbjct: 187 TTLSHALVGRRPM 199 >gi|145298808|ref|YP_001141649.1| recombination protein RecR [Aeromonas salmonicida subsp. salmonicida A449] gi|166221920|sp|A4SLX9|RECR_AERS4 RecName: Full=Recombination protein recR gi|142851580|gb|ABO89901.1| recombination protein RecR [Aeromonas salmonicida subsp. salmonicida A449] Length = 200 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ ++K L +PG GP+SA+R L++++ LA+ + ++ CS C Sbjct: 3 FSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLNRALTEIGHCSHCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 C IC + +R+ S ++ VVE AD+ A+E + + Y VL G LSPLD IGPE+ Sbjct: 63 FTENALCEICANPKREESGLLCVVESPADVAAIEHTGQFSGRYFVLMGHLSPLDGIGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G++ L +R++ + I ELI A + TIEG TA YI D + VK++R+A+G+P+G EL+ Sbjct: 123 LGLEILEQRLKAESISELILATNPTIEGDATAWYIADMARAAGVKVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLMGRQPL 199 >gi|150025368|ref|YP_001296194.1| recombination protein RecR [Flavobacterium psychrophilum JIP02/86] gi|172048609|sp|A6GZ60|RECR_FLAPJ RecName: Full=Recombination protein recR gi|149771909|emb|CAL43383.1| Recombination protein RecR [Flavobacterium psychrophilum JIP02/86] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 120/196 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +E + +A++PG G R+A R L+L+K+ + LA+++ + + C Sbjct: 1 MEFSSKLLEKAVNEMAQLPGIGKRTALRLVLYLLKQPKDRTDFLAQSLLTMREGIIFCEN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC ++ R+ ++ VVEDV D+ A+E + +YHVLGG +SP+D +GP Sbjct: 61 CHNISDVAVCEICSNKNRNHQIVCVVEDVRDVMAIENTGQFRGVYHVLGGKISPIDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I SL+E+++ + E+IFA+S+T+EG TT YI ++K ++ + +A GI +G E Sbjct: 121 SQLNISSLVEKVKSGSVSEIIFALSSTMEGDTTNFYIYKQIKDCEIITSSIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I +R Sbjct: 181 LEYADEVTLGRSILNR 196 >gi|229591980|ref|YP_002874099.1| recombination protein RecR [Pseudomonas fluorescens SBW25] gi|259563703|sp|C3JXP7|RECR_PSEFS RecName: Full=Recombination protein recR gi|229363846|emb|CAY51305.1| recombination protein [Pseudomonas fluorescens SBW25] Length = 200 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C C Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMTGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 122 GIPQLVARIEEQGTFTEVILATNPTVEGEATAHYIAQLLTNKGLITSRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|300933816|ref|ZP_07149072.1| recombination protein RecR [Corynebacterium resistens DSM 45100] Length = 218 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 20/217 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++++I +R+PG GP+SA+R LHL++ + + L A+ + + V C IC Sbjct: 1 MFEGPLQDVIDEFSRLPGIGPKSAQRIALHLMEVEAEDLKRFQAALGRLQDGVAFCRICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC D RD S+I VVE+ D+ +ER+ YHVLGG+L PL +GP++ Sbjct: 61 NISQEDICRICADSSRDKSIICVVEESKDIQVIERTAEYRGRYHVLGGALDPLAGVGPKE 120 Query: 125 IGIQSLIERI-------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKG 165 + + L++RI +I E+I A EG+ TA Y+ LK Sbjct: 121 LNVTPLVQRIGGVLNDVARPGEGDEVVYDPAPEIEEVIIATDPNTEGEATASYLGRLLKD 180 Query: 166 I-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +K+TRLA GIPMG +L+++D+ T+ A RT L Sbjct: 181 FPGLKVTRLASGIPMGGDLEFVDELTLSRAFAGRTAL 217 >gi|312962438|ref|ZP_07776929.1| Recombination protein recR [Pseudomonas fluorescens WH6] gi|311283365|gb|EFQ61955.1| Recombination protein recR [Pseudomonas fluorescens WH6] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C C Sbjct: 9 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRT 68 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 69 LTEEELCPQCADPRRDDTLLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 127 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 128 GIPQLVARIEEQGTFSEVILATNPTVEGEATAHYIAQLLSNKGLITSRIAHGVPLGGELE 187 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 188 LVDGGTLAHSFAGRKPI 204 >gi|327483767|gb|AEA78174.1| Recombination protein RecR [Vibrio cholerae LMA3894-4] Length = 190 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C D C Sbjct: 1 MEALRCLPGVGPKSAQRMAFHLLQRDRKGGIQLAEALSQAMVEIGHCQECRTFTEQDVCH 60 Query: 74 ICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ +L Sbjct: 61 ICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDTLDY 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R L Sbjct: 181 HSLLGRHKL 189 >gi|39995207|ref|NP_951158.1| recombination protein RecR [Geobacter sulfurreducens PCA] gi|73621487|sp|Q74GZ7|RECR_GEOSL RecName: Full=Recombination protein recR gi|39981969|gb|AAR33431.1| recombination protein RecR [Geobacter sulfurreducens PCA] gi|298504212|gb|ADI82935.1| recombination protein RecR [Geobacter sulfurreducens KN400] Length = 197 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 122/196 (62%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L+ L ++PG G ++A R HL+K + LA+++ ++ ++V CS+C Sbjct: 4 FSDSLSRLLAELQKLPGVGEKTALRLAFHLLKSPDN-AAALADSLRDVMSRVRFCSVCFG 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC C D RD I VVE+ DL A+ER++A YHVL G+LSPL+ + P+ + Sbjct: 63 ITEDDPCRFCSDA-RDDGAICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++R+E +RE++ A + T+EG+ TA Y+ +K + V++TRLA+GIP+GS+L++ Sbjct: 122 RVAELMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSDLEF 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A+ R+ L Sbjct: 182 VDAATVQRALEGRSEL 197 >gi|330996287|ref|ZP_08320172.1| recombination protein RecR [Paraprevotella xylaniphila YIT 11841] gi|329573479|gb|EGG55086.1| recombination protein RecR [Paraprevotella xylaniphila YIT 11841] Length = 205 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 122/199 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ Q + +++ + + V C Sbjct: 1 MNQQYPSVLLEKAVNEFAKLPGIGSKTAMRLVLHLLRQDVQAVESFGQSLITLKHDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SIC N+ TD C IC D QRD S I VVE++ D+ A+E + +YHVLGG +SP+D + Sbjct: 61 SICHNISDTDVCEICSDMQRDHSTICVVENIQDVMAIENTHQYKGVYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ +Q+L+ER+E +RE+I A+S T+EG TT YI KL+ + +I+ +A G+ Sbjct: 121 GPSDLQMQTLVERVEDGGVREVILALSPTMEGDTTNFYIYRKLENVAARISVIARGVAQN 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL Y D+ T+ +I +R Sbjct: 181 DELQYTDEVTLGRSIVNRV 199 >gi|126739562|ref|ZP_01755254.1| recombination protein RecR [Roseobacter sp. SK209-2-6] gi|126719208|gb|EBA15918.1| recombination protein RecR [Roseobacter sp. SK209-2-6] Length = 199 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 104/201 (51%), Positives = 143/201 (71%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +IENLI ++A++PG GPRSARRA LHL++K+ LL PLA+ M+ + C Sbjct: 1 MSDNSIS-DIENLIGLMAKLPGMGPRSARRAVLHLIRKRGLLLTPLADCMSEVAATAREC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGNV T+D C++C D+ R + VVE V+DLWA+ER+ YHVLGG+LS LD + Sbjct: 60 LNCGNVGTSDICSLCNDEDRANGELCVVETVSDLWAMERAAVFKGRYHVLGGTLSALDAV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPED+ I L++R+ + IRE+I A++ATI+GQTTAHYI D+L+G V++T LA G+P+G Sbjct: 120 GPEDLHIPRLVDRVTSEGIREVILALNATIDGQTTAHYIADQLEG-QVRLTSLAQGVPIG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ELDYLD+GTI A+R+R L Sbjct: 179 GELDYLDEGTITAALRARKDL 199 >gi|329849469|ref|ZP_08264315.1| recombination protein RecR [Asticcacaulis biprosthecum C19] gi|328841380|gb|EGF90950.1| recombination protein RecR [Asticcacaulis biprosthecum C19] Length = 200 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 100/196 (51%), Positives = 137/196 (69%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE L+ +L+++PG GPRSARRA L L+K++EQLL PL AM + +KV C +CG Sbjct: 5 AGPEIERLMALLSKLPGLGPRSARRAALALLKRREQLLIPLTVAMQDAADKVVTCGVCGA 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T +PCA C D RD ++I VVE+ + LWA+ER A + YHVLGG LS LD + PED+ Sbjct: 65 LSTRNPCATCSDPARDTTMICVVEEDSALWAMERVGAFSGRYHVLGGLLSALDGVRPEDL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMGSEL 183 + L+ R+ I E+I A+ AT+EGQTTAHYI D+LKG+ +T LA G+P+G +L Sbjct: 125 RLDGLVARVREGGIHEIIMALPATVEGQTTAHYIADRLKGLQNQATVTYLARGVPVGGDL 184 Query: 184 DYLDDGTIFEAIRSRT 199 D+LDDGTI A+++R Sbjct: 185 DWLDDGTIAHALKTRR 200 >gi|315224197|ref|ZP_07866037.1| recombination protein R [Capnocytophaga ochracea F0287] gi|314945930|gb|EFS97939.1| recombination protein R [Capnocytophaga ochracea F0287] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 116/196 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + +A++P G R+A R LHL+K+ E+ LA+A+ + + C Sbjct: 1 MDFSSKLLENAVYEIAQLPSIGKRTALRLALHLLKQPEEQSLQLAQAIVALRTHIQYCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ D C IC + RD V+ VVED D+ A+E + YHVLGG +SP+D I P Sbjct: 61 CHNISDVDLCEICANPMRDTGVVCVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SLIE+++ K+ ELI A+S T+EG TT YI +++ + I+ +A GI +G E Sbjct: 121 SNLYIASLIEKVKTGKVTELILALSNTMEGDTTNFYIYKQVEPYHITISTIARGIAVGGE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYTDEVTLGRSITQR 196 >gi|89890633|ref|ZP_01202143.1| recombination DNA repair protein RecR [Flavobacteria bacterium BBFL7] gi|89517548|gb|EAS20205.1| recombination DNA repair protein RecR [Flavobacteria bacterium BBFL7] Length = 205 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 123/198 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E + ++++PG G R+A R LHL+++ L++A+ N+ + + C Sbjct: 1 MNFSSKILEEAVNQVSQLPGIGKRTALRLVLHLMRQPASQTDALSQALTNLRHDLKFCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C NV D C IC RD +++ VVED+ D+ A+E + LYHVLGG +SP+D IGP Sbjct: 61 CHNVSDVDICEICSSHNRDKTIVCVVEDIRDVMAIENTSQYRGLYHVLGGKISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I+SLIERI+ ++ELIFA+S TIEG TT YI +L G++V + +A GI +G E Sbjct: 121 QDLNIKSLIERIQNDGVQELIFALSPTIEGDTTNFYIFKQLNGLEVNTSTIARGIAVGDE 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 L++ D+ T+ +I R Sbjct: 181 LEFADEVTLGRSILHRVP 198 >gi|313892542|ref|ZP_07826129.1| recombination protein RecR [Dialister microaerophilus UPII 345-E] gi|313118939|gb|EFR42144.1| recombination protein RecR [Dialister microaerophilus UPII 345-E] Length = 196 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 120/192 (62%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E + + ++PG G +SA+R ++ + ++ + + + N VC CSIC N+ T+ Sbjct: 5 LEEVAEQFCKLPGIGVKSAKRLAYFMLMRPQKDIDTFLKTIENAKKSVCYCSICCNLATS 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 DPC+IC D +R++S++ +VE+ D+ A+E+S N LYHVL G LSPLD IGPE++ I+ Sbjct: 65 DPCSICTDSKRNSSLLCIVENPQDVHAMEQSHEYNGLYHVLHGVLSPLDGIGPENLKIKE 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R++ I E+I A EG+ TA+YI D +K +KITR A G+P GS + Y D Sbjct: 125 LLTRLKDSNINEVIIATDPDTEGEATAYYIADLIKPSGIKITRPARGLPAGSNIGYADSI 184 Query: 190 TIFEAIRSRTVL 201 T+ A+ +R + Sbjct: 185 TLANAVENRKEI 196 >gi|221067922|ref|ZP_03544027.1| recombination protein RecR [Comamonas testosteroni KF-1] gi|220712945|gb|EED68313.1| recombination protein RecR [Comamonas testosteroni KF-1] Length = 196 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 119/192 (61%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ LI+ L R+PG G +SA+R HL+++ + LA A+ + N V C C Sbjct: 5 QSLDALIEALRRLPGVGIKSAQRMAFHLLQRDQAGALQLARALDSAVNSVHHCERCHTFT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C+IC D RD + + VVE ADL A+ER++A Y+VL G LSPLD +GP++IG+ Sbjct: 65 EGAICSICDDAGRDGARLCVVEAPADLAAMERTEAYQGYYYVLMGRLSPLDGVGPKEIGM 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ER ++E+I A S T EG+ TAH I + LK + +TRLA G+P+GSEL+Y+D Sbjct: 125 KQLLERACDGVVQEVILATSFTAEGEATAHAISEALKSRGILVTRLARGVPIGSELEYVD 184 Query: 188 DGTIFEAIRSRT 199 GTI A+ R Sbjct: 185 LGTIAHALVDRR 196 >gi|78046685|ref|YP_362860.1| recombination protein RecR [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585701|sp|Q3BWK3|RECR_XANC5 RecName: Full=Recombination protein recR gi|78035115|emb|CAJ22760.1| recombination protein RecR [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 197 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 112/194 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI+ +PG G +SA+R H+++++ + LA A+ N KV C C + Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVEKVGHCVQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 ++ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|300704435|ref|YP_003746038.1| recombination protein recr [Ralstonia solanacearum CFBP2957] gi|299072099|emb|CBJ43431.1| Recombination protein recR [Ralstonia solanacearum CFBP2957] Length = 207 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGAARLAEALAEAAESIRHCSRCNT 67 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +R ASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 68 FTEQDVCETCLDPRRAASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 127 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K++RLA G+P+G Sbjct: 128 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLARGVPVGG 187 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 188 ELEYVDAGTIARAVLDRRQL 207 >gi|311745661|ref|ZP_07719446.1| recombination protein RecR [Algoriphagus sp. PR1] gi|126575099|gb|EAZ79449.1| recombination protein RecR [Algoriphagus sp. PR1] Length = 205 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 124/199 (62%), Gaps = 3/199 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I K IE+ + ++R+PG G ++A R LHL+K+ E L A+ + +V C I Sbjct: 1 MNIPSKLIEDAVTEISRLPGIGKKTALRLALHLLKQSEVHTEALTLALTRMREEVQYCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C+IC +RD VI VVED+ D+ A+E + LYHVLGG +SP+ IGP Sbjct: 61 CHNISDDEHCSICKSHRRDHGVICVVEDIRDVLAIENTDQYQGLYHVLGGVISPIQGIGP 120 Query: 123 EDIGIQSLIERI---EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 E++ I+SLIER+ + ++E+I A+S T+EG TT+ Y+ +L +K++ +A GIP+ Sbjct: 121 EELTIESLIERVSTDSEEPVKEVIMALSGTMEGDTTSFYLAKRLHEKGIKVSTIARGIPV 180 Query: 180 GSELDYLDDGTIFEAIRSR 198 G EL+Y D+ T+ +I +R Sbjct: 181 GGELEYTDEITLGRSIMTR 199 >gi|284046732|ref|YP_003397072.1| recombination protein RecR [Conexibacter woesei DSM 14684] gi|283950953|gb|ADB53697.1| recombination protein RecR [Conexibacter woesei DSM 14684] Length = 212 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 14/213 (6%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ LI L R+PG G R+A+R HL++ E+ LAEA+ + ++ LC Sbjct: 1 MSS--FAPPVQRLITELGRLPGIGGRTAQRLAFHLLRASEEDALALAEAIKEVKARIGLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ C IC D++RDA ++ VVE+ +D+ +ER+ + YHVLGG+LSP+D I Sbjct: 59 EVCFNLSDGPRCRICSDERRDAGLVCVVEEPSDIIPIERTHEFHGRYHVLGGALSPIDGI 118 Query: 121 GPEDIGIQSLIERI----------EVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDV 168 PED+ I L R+ IRE++ A + T G+ TA +I L+ V Sbjct: 119 DPEDLRIAELYTRVTPPADAPQDEHPTPIREVVLATNPTTTGEATALHIAAHLREQAPQV 178 Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +TRLA G+P+G++L+Y D+ T+ A+ R L Sbjct: 179 TVTRLASGLPVGADLEYADELTLGRALSGRRAL 211 >gi|88808903|ref|ZP_01124412.1| recombination protein RecR [Synechococcus sp. WH 7805] gi|88786845|gb|EAR18003.1| recombination protein RecR [Synechococcus sp. WH 7805] Length = 182 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79 +PG GPR+A+R LHL+++ E+ + A A+ +V C C ++ C IC + + Sbjct: 1 MPGIGPRTAQRLALHLLRQPEEQIHSFANALLAARTEVGQCQTCHHLSAEPICEICRNPE 60 Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139 R I VV D DL ALER++ + YHVLGG +SP+D IGP+ + I SL++R+ Sbjct: 61 RSNGQICVVADSRDLLALERTREFSGHYHVLGGLISPMDGIGPDLLQISSLVKRVAASNT 120 Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 E+I A++ ++EG TT+ Y+ LK ++R+AYG+P+GSEL+Y D+ T+ A+ R Sbjct: 121 EEVILALTPSVEGDTTSLYVARLLKPF-TTVSRIAYGLPVGSELEYADEVTLSRALEGRR 179 >gi|167034827|ref|YP_001670058.1| recombination protein RecR [Pseudomonas putida GB-1] gi|189029368|sp|B0KPW7|RECR_PSEPG RecName: Full=Recombination protein recR gi|166861315|gb|ABY99722.1| recombination protein RecR [Pseudomonas putida GB-1] Length = 200 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C Sbjct: 3 FSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD + + VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEQELCPQCADTRRDDTQLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + TR+A+G+P+G EL+ Sbjct: 122 GIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLAATRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ AI R + Sbjct: 182 LVDGGTLAHAIAGRRPI 198 >gi|330808466|ref|YP_004352928.1| Recombination protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376574|gb|AEA67924.1| Recombination protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 200 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C +C Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGSRLAQALSQAMEGVGHCRLCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C C D +RD S++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEDDLCPQCADPRRDDSLLCVVEGPMDVYAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI LI RIE E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 122 GIPQLIARIEEAGTFTEVILATNPTVEGEATAHYIAQLLNNKGLIASRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|73621511|sp|Q4ULQ0|RECR_RICFE RecName: Full=Recombination protein recR Length = 201 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 90/199 (45%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNKTNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNMDTENICCICSSEYRDKSVIAVVETVAELWAMERSSNFKGLYHVLGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + L+ KI+RLA GIP+G Sbjct: 121 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLREHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTLSAAINLRQP 199 >gi|330502979|ref|YP_004379848.1| recombination protein RecR [Pseudomonas mendocina NK-01] gi|328917265|gb|AEB58096.1| recombination protein RecR [Pseudomonas mendocina NK-01] Length = 199 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C + Sbjct: 3 FSPLIRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRCRS 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C+D++RD SV+ VVE D+ A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEDEVCQLCLDERRDDSVLCVVEGPMDVHAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ERIE E+I A + T+EG+ TAHYI L G + +R+A+G+P+G EL+ Sbjct: 122 GIPELLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLVASRIAHGMPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRRPI 197 >gi|117620825|ref|YP_857005.1| recombination protein RecR [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166221919|sp|A0KL54|RECR_AERHH RecName: Full=Recombination protein recR gi|117562232|gb|ABK39180.1| recombination protein RecR [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 200 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ ++K L +PG GP+SA+R L++++ LA+ ++ ++ CS C Sbjct: 3 FSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLSRALTEIGHCSHCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC + +R+ ++ VVE AD+ A+E++ + Y VL G LSPLD IGPE+ Sbjct: 63 FTENERCEICANPKREENGLLCVVESPADVAAIEQTGQFSGRYFVLMGHLSPLDGIGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G++ L R++ + I ELI A + TIEG TA YI D + VK++R+A+G+P+G EL+ Sbjct: 123 LGLEILERRLKDEAISELILATNPTIEGDATAWYIADMARAAGVKVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLMGRQPL 199 >gi|257091958|ref|YP_003165599.1| recombination protein RecR [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044482|gb|ACV33670.1| recombination protein RecR [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 200 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 117/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +E+LI+ L +PG GP+SA+R HL++ LA+A+ + C C Sbjct: 3 APSSLESLIEALRCLPGVGPKSAQRMAYHLMQHDRPGADRLADALQLALAALRHCQRCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 T+ C+ C+ +RD S + VVE D+ +E++ A + LY+VL G +SPLD IGP ++ Sbjct: 63 FTETEICSRCLSAKRDPSQLCVVETPVDMNMMEQTHAYSGLYYVLMGRVSPLDGIGPAEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L+ R +RE+I A + T EG+ TAHY+ + L+ V ++R+A G+P+G EL+Y Sbjct: 123 HLERLLARCGDGLVREVIIATNYTNEGEATAHYLSEMLRSRGVSVSRIARGVPVGGELEY 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ +A+R R L Sbjct: 183 VDSGTLAQALRERRPL 198 >gi|262276242|ref|ZP_06054051.1| recombination protein RecR [Grimontia hollisae CIP 101886] gi|262220050|gb|EEY71366.1| recombination protein RecR [Grimontia hollisae CIP 101886] Length = 200 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E L++ L +PG GP+SA+R HL+++ Q L+EA+ + + C C Sbjct: 3 TSHLLEQLMEALRCLPGVGPKSAQRMAFHLLQRNRQGGVKLSEALLSAMTDIGHCEKCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CAIC + +R I VVE AD+ A+E + + Y VL G LSPLD IGP D Sbjct: 63 FTEEEECAICANPRRQENGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 IG+ L +R+ + I ELI A + T+EG+ TAHYI + V +R+A+G+PMG EL+ Sbjct: 123 IGLDLLEKRLSSESISELILATNPTVEGEATAHYISELCSEHGVIASRIAHGVPMGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ +I R L Sbjct: 183 LVDGTTLSHSIIGRHRL 199 >gi|66046625|ref|YP_236466.1| recombination protein RecR [Pseudomonas syringae pv. syringae B728a] gi|302188651|ref|ZP_07265324.1| recombination protein RecR [Pseudomonas syringae pv. syringae 642] gi|75501355|sp|Q4ZQZ4|RECR_PSEU2 RecName: Full=Recombination protein recR gi|63257332|gb|AAY38428.1| RecR protein [Pseudomonas syringae pv. syringae B728a] gi|330972503|gb|EGH72569.1| recombination protein RecR [Pseudomonas syringae pv. aceris str. M302273PT] Length = 200 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA+A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|25026767|ref|NP_736821.1| recombination protein RecR [Corynebacterium efficiens YS-314] gi|259508096|ref|ZP_05750996.1| RecR protein [Corynebacterium efficiens YS-314] gi|73621481|sp|Q8FU10|RECR_COREF RecName: Full=Recombination protein recR gi|23492046|dbj|BAC17021.1| putative recombination protein [Corynebacterium efficiens YS-314] gi|259164319|gb|EEW48873.1| RecR protein [Corynebacterium efficiens YS-314] Length = 218 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R HL+ + L +A+ + + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPDDITRLQDALGAVRDGVRFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D RD +I VVE+ D+ +ER+ YHVLGG+L PL +GP + Sbjct: 61 NISRDEVCRICNDSGRDRGLICVVEEPKDIQVIERTGEFRGRYHVLGGALDPLANVGPRE 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++RI + +I E+I A EG+ TA Y+ L+ Sbjct: 121 LTISTLLQRIGGVLDDRELADSTPDTPLLDDKPQIHEVILATDPNTEGEATASYLARLLQ 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+ ++RLA G+P+G +L+++D+ T+ A+ R L Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLPL 218 >gi|300691827|ref|YP_003752822.1| Recombination protein recR [Ralstonia solanacearum PSI07] gi|299078887|emb|CBJ51548.1| Recombination protein recR [Ralstonia solanacearum PSI07] Length = 206 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ LI+ L +PG GP+SA+R HL++ + LAEA+A + CS C Sbjct: 7 TPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 66 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP++I Sbjct: 67 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEI 126 Query: 126 GIQSLIERIEVK----KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 ++ L+ R E+I A + T EG+ TAHYI + LK +K +RLA G+P+G Sbjct: 127 HLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKASRLARGVPVGG 186 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GTI A+ R L Sbjct: 187 ELEYVDAGTIARAVLDRRQL 206 >gi|326693437|ref|ZP_08230442.1| recombination protein RecR [Leuconostoc argentinum KCTC 3773] Length = 201 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG G ++A R + + E + ++A+A+ N + C +CGN Sbjct: 3 YPEPIAKLIASYTKLPGIGQKTATRLAFYTLGMAEDDVIDFSKALASAKNDLTFCEVCGN 62 Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + +PC IC D RD + + VVE D+ A+E ++ + LYHVL G +SP GPE Sbjct: 63 ITEKTINPCVICQDPSRDQTTVFVVEQARDVMAMENTRDYHGLYHVLNGVISPSSGTGPE 122 Query: 124 DIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI + SLI R+ E ++I E+I + EG+ TA Y+ LK +K+TRLA+G+ +GS+ Sbjct: 123 DINLPSLIRRLSEHQEINEVIVGTNVNAEGEATAMYLARLLKPAGIKVTRLAHGLAVGSD 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D T+ +A++ RT L Sbjct: 183 IDYADQLTLIKAVQGRTEL 201 >gi|332535327|ref|ZP_08411126.1| recombination protein RecR [Pseudoalteromonas haloplanktis ANT/505] gi|332035240|gb|EGI71747.1| recombination protein RecR [Pseudoalteromonas haloplanktis ANT/505] Length = 202 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 103/194 (53%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + LI+ L PG GP+SA+R HL+++ + L A+ + C C Sbjct: 4 SDSLNQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAIGHCQSCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C IC+ +R S ++ VVE D+ A+E++ LY VL G LSP+D IGP++I Sbjct: 64 CEQAQCDICLSTKRQDSGILCVVESPTDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +++ I E+I A + T+EG TTAHYI V +R+A+GIP+G ELD Sbjct: 124 GLDVLEQKLAQGDINEVILATNPTVEGDTTAHYIAQLCHKYKVGASRIAHGIPVGGELDL 183 Query: 186 LDDGTIFEAIRSRT 199 +D T+ A R Sbjct: 184 VDGRTLMHAFSGRR 197 >gi|256545278|ref|ZP_05472643.1| recombination protein RecR [Anaerococcus vaginalis ATCC 51170] gi|256399105|gb|EEU12717.1| recombination protein RecR [Anaerococcus vaginalis ATCC 51170] Length = 199 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI+ ++P G +SA R + +V + + + ++++ + +K+ C I Sbjct: 1 MSLYPESLNKLIEQFQKLPTIGKKSAERLAMSIVGRDLESVEEFSKSLLEVKSKIHPCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ + C IC D R+ + I V+EDV +L+A+E+S + YH+LGG +SP D + Sbjct: 61 CGNLTEDEICGICKDISREENTICVIEDVRNLYAIEKSSVYHGKYHILGGLISPSDNVKA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ED+ I L++RI+ + I E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS Sbjct: 121 EDLSIDKLLDRIDKENINEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYFDQLTLERALEDRREI 199 >gi|260221003|emb|CBA29133.1| Recombination protein recR [Curvibacter putative symbiont of Hydra magnipapillata] Length = 196 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 75/191 (39%), Positives = 111/191 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI+ L +PG G +SA+R HL++ L+ A+ + V C C Sbjct: 6 ALDTLIQALRGLPGVGVKSAQRMAFHLLQHDRPAAQFLSRALQQAADTVHHCERCHTFTQ 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C+ C+D++RD S + VVE AD A+ER+ A LY VL G LSPLD +GP D+G + Sbjct: 66 DAVCSTCLDERRDRSQLCVVETPADQSAMERTGAYKGLYFVLMGKLSPLDGVGPNDLGFK 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +R ++E+I A + T EG+ TA+ I + LK ++ TRLA G+P+GSEL+Y+D Sbjct: 126 KLFDRACDGVVQEVILATNFTAEGEATAYVIAEGLKARGLRPTRLARGVPVGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALVDRR 196 >gi|119897250|ref|YP_932463.1| recombination protein RecR [Azoarcus sp. BH72] gi|171704428|sp|A1K421|RECR_AZOSB RecName: Full=Recombination protein recR gi|119669663|emb|CAL93576.1| recombination protein RecR [Azoarcus sp. BH72] Length = 199 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 2/199 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ LI L +PG GP+SA+R HL+++ ++ LA A+ + + C Sbjct: 1 MSS--PPSSLDELIAALRCLPGVGPKSAQRMAYHLLQRDQRGAARLAGALGHALEVLRHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N C C + +RD + + VVE ADL +E++++ N LY+VL G LSPLD + Sbjct: 59 QRCNNFSEEAVCQRCANPRRDPATLCVVEMPADLAMIEQTQSYNGLYYVLMGRLSPLDGV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++G++ LI R +++E+I A + T EG+ TAH + L VK++R++ G+P+G Sbjct: 119 GPRELGLERLIARATDGEVKEVILATNFTNEGEATAHTVATLLGARGVKVSRISRGVPVG 178 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL++ D GTI +A+ R Sbjct: 179 GELEHTDTGTIAQALVERR 197 >gi|239947272|ref|ZP_04699025.1| recombination protein RecR [Rickettsia endosymbiont of Ixodes scapularis] gi|239921548|gb|EER21572.1| recombination protein RecR [Rickettsia endosymbiont of Ixodes scapularis] Length = 201 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNETNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDIRLKSLINNLVEIDKKIVKCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNMDTENICHICSSEYRDKSIIAIVETVAELWAMERSGNFRGLYHVLGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTLSAAINLRQP 199 >gi|332882336|ref|ZP_08449964.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679720|gb|EGJ52689.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 205 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 121/199 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + A++PG G ++A R LHL+++ Q + +++ + + V C Sbjct: 1 MNQQYPSVLLEKAVNEFAKLPGIGSKTAMRLVLHLLRQDVQAVESFGQSLITLKHDVKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N+ TD C IC D QRD S I VVE++ D+ A+E + +YHVLGG +SP+D + Sbjct: 61 SVCHNISDTDVCEICSDMQRDHSTICVVENIQDVMAIENTHQYKGVYHVLGGVISPMDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ IQ+L+ER+E +RE+I A+S T+EG TT YI KL+ +I+ +A G+ Sbjct: 121 GPSDLQIQTLVERVEDGGVREVILALSPTMEGDTTNFYIYRKLENAAARISVIARGVAQN 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL Y D+ T+ +I +R Sbjct: 181 DELQYTDEVTLGRSIVNRV 199 >gi|77458035|ref|YP_347540.1| recombination protein RecR [Pseudomonas fluorescens Pf0-1] gi|123605283|sp|Q3KFA5|RECR_PSEPF RecName: Full=Recombination protein recR gi|77382038|gb|ABA73551.1| recombination protein [Pseudomonas fluorescens Pf0-1] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C C Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGTRLAQALSQAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEDDLCPQCADTRRDDTLLCVVEGPMDVYAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE E+I A + T+EG+ TAHYI L+ + +R+A+G+P+G EL+ Sbjct: 122 GIPQLMARIEEAGTFTEVILATNPTVEGEATAHYIAQLLQNKGLIASRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|330953815|gb|EGH54075.1| recombination protein RecR [Pseudomonas syringae Cit 7] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA+A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCADTRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|114568988|ref|YP_755668.1| DNA replication and repair protein RecR [Maricaulis maris MCS10] gi|122316784|sp|Q0ASK7|RECR_MARMM RecName: Full=Recombination protein recR gi|114339450|gb|ABI64730.1| DNA replication and repair protein RecR [Maricaulis maris MCS10] Length = 201 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 106/200 (53%), Positives = 143/200 (71%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ G EIE LI +LA++PG GPRSARRA L+L+ KK+ L+ PLAEA+A+ +K+ C Sbjct: 1 MKTASAGPEIERLISLLAKLPGLGPRSARRAALNLLGKKDALMRPLAEALADAADKIRAC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGN+D +DPC +C R + I VVE V DLWALER+ A YHVLGG LS LD + Sbjct: 61 SECGNMDVSDPCTVCAAPNRLDAAICVVETVGDLWALERAGAFKGRYHVLGGVLSALDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 PED+ I L+ER +++ E++ A++AT++GQTTAHY+ D++ G +V IT LA G+P+G Sbjct: 121 RPEDLNITKLVERSAREEVSEIVLALNATVDGQTTAHYLADRMAGCNVSITSLARGVPVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLDDGT+ A RSR+ Sbjct: 181 GELDYLDDGTLAAAFRSRST 200 >gi|189423438|ref|YP_001950615.1| recombination protein RecR [Geobacter lovleyi SZ] gi|229890151|sp|B3E1K3|RECR_GEOLS RecName: Full=Recombination protein recR gi|189419697|gb|ACD94095.1| recombination protein RecR [Geobacter lovleyi SZ] Length = 197 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 127/194 (65%), Gaps = 2/194 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + L+ L ++PG G R+A R HL+K + L LAEA+ + +VC CS+C + Sbjct: 6 PTLTRLVGELKKLPGIGERTALRLAFHLLKSPQNLGS-LAEALTQVQERVCACSVCFALT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 +PC IC RD+SVI VVE D+ ALERS A + YHVL G++SPL + P+D+ I Sbjct: 65 EQNPCPICS-GGRDSSVICVVETSQDMLALERSNAYHGSYHVLQGAISPLHGVNPDDLRI 123 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ RIE K+ E++ A + T+EG+TTA Y+ +LK + +++TRLA+GIP+GS+++++D Sbjct: 124 RELLMRIEQGKVEEVVIATNFTVEGETTALYLARQLKPLGIRVTRLAHGIPLGSDIEFVD 183 Query: 188 DGTIFEAIRSRTVL 201 T+ A++ R+ L Sbjct: 184 PATVQWAMKGRSEL 197 >gi|15639988|ref|NP_219441.1| recombination protein RecR [Treponema pallidum subsp. pallidum str. Nichols] gi|189026227|ref|YP_001933999.1| recombination protein RecR [Treponema pallidum subsp. pallidum SS14] gi|6093950|sp|O83969|RECR_TREPA RecName: Full=Recombination protein recR gi|3323328|gb|AAC65952.1| recombination protein (recR) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018802|gb|ACD71420.1| recombination protein RecR [Treponema pallidum subsp. pallidum SS14] gi|291060361|gb|ADD73096.1| recombination protein RecR [Treponema pallidum subsp. pallidum str. Chicago] Length = 201 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 113/194 (58%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 IE +++ L+R+PG G + A R HL+K+ LA +A ++ +V C CG Sbjct: 3 PAIEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGAFC 62 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 CA+C D RD +I VVE D+ + L+HVLGG ++PL+ +GP+ + I Sbjct: 63 EGRTCALCTDASRDRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQLRI 122 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 +L++R++ +RE+I A++ T+EG TTA Y+ L V +TRLA GIP+G +L+Y+D Sbjct: 123 AALLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEYID 182 Query: 188 DGTIFEAIRSRTVL 201 T+ ++R R L Sbjct: 183 RTTLAHSLRGRRPL 196 >gi|21241866|ref|NP_641448.1| recombination protein RecR [Xanthomonas axonopodis pv. citri str. 306] gi|294627934|ref|ZP_06706513.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666541|ref|ZP_06731782.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24212230|sp|Q8PNG0|RECR_XANAC RecName: Full=Recombination protein recR gi|21107249|gb|AAM35984.1| recombination protein RecR [Xanthomonas axonopodis pv. citri str. 306] gi|292597848|gb|EFF42006.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603685|gb|EFF47095.1| recombination protein RecR [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 197 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 112/194 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI+ +PG G +SA+R H+++++ + LA A+ + KV C C + Sbjct: 2 STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 ++ C IC RD + VVE AD A+E + LY +L G LSPLD IGP ++G Sbjct: 62 TESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|330899494|gb|EGH30913.1| recombination protein RecR [Pseudomonas syringae pv. japonica str. M301072PT] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA+A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLAQALGQAMDGVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ER+ + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|217969822|ref|YP_002355056.1| recombination protein RecR [Thauera sp. MZ1T] gi|217507149|gb|ACK54160.1| recombination protein RecR [Thauera sp. MZ1T] Length = 197 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 119/195 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ ++ LI+ L +PG GP+SA+R HL+++ ++ L A+ + + C+ C Sbjct: 1 MSPSSLDELIEALRCLPGVGPKSAQRMAYHLLQRDQRGAARLGNALLHALEVLRHCARCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C C + +RDA+++ VVE ADL +E++++ N LY+VL G LSPLD +GP + Sbjct: 61 SFTEDEVCPRCANPRRDAALLCVVEMPADLAMIEQTQSYNGLYYVLMGRLSPLDGVGPRE 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + LI R + +RE+I A + T EG+ TAH + L VK++RL+ G+P+G EL+ Sbjct: 121 LRLDKLIARATEEGVREVILATNFTNEGEATAHTVASLLGARGVKVSRLSRGVPVGGELE 180 Query: 185 YLDDGTIFEAIRSRT 199 + D GTI +A+ R Sbjct: 181 HTDIGTIGQALIERR 195 >gi|126662227|ref|ZP_01733226.1| recombination protein RecR [Flavobacteria bacterium BAL38] gi|126625606|gb|EAZ96295.1| recombination protein RecR [Flavobacteria bacterium BAL38] Length = 205 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 121/196 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ K +EN + ++++PG G R+A R LHL+K+ L A+A++ N + C Sbjct: 1 MELPSKLLENAVNEMSQLPGIGKRTALRLVLHLLKQPVDQTQGLTAALASMRNDIQYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + D C IC + RD ++I VVEDV D+ A+E + +YHVLGG +SP++ IGP Sbjct: 61 CHTISDFDICGICSNLSRDKTIICVVEDVRDVMAIENTGMFKGVYHVLGGKISPIEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I SL+E+++ + E+IFA+S+T+EG TT YI ++K VK + +A GI +G E Sbjct: 121 SQLKINSLVEKVKNNAVSEIIFALSSTMEGDTTNFYIYKQIKDFAVKTSTIARGIAVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ ++ +R Sbjct: 181 LEYADEVTLGRSLLNR 196 >gi|119713123|gb|ABL97192.1| recombination protein RecR [uncultured marine bacterium EB0_49D07] Length = 195 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 2/197 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 ++ + LI+ L +PG G +SA+R L L+ K + LA+ + + C +C Sbjct: 1 MSKDLLYELIEALTILPGVGKKSAQRMALFLLDKNKDGAVHLAKTLEECLETIQRCEVCR 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC D RD + VVE +D+ A+E + Y VL G LSP+D I P+D Sbjct: 61 QLTSEPICRICSDSSRDVYSLCVVESPSDVLAIESTGGFKGRYFVLMGRLSPIDGISPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI L+ I+ +I E+I A S+T+EG TA +I D L+ VK++R++YGIP+G EL+ Sbjct: 121 LGIPDLLRHIQHTQIEEVILATSSTVEGDATASFIKDHLQS--VKVSRISYGIPIGGELE 178 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D TI AI+ R + Sbjct: 179 YVDGNTIARAIQGRIEI 195 >gi|70729289|ref|YP_259026.1| recombination protein RecR [Pseudomonas fluorescens Pf-5] gi|123656866|sp|Q4KFF7|RECR_PSEF5 RecName: Full=Recombination protein recR gi|68343588|gb|AAY91194.1| recombination protein RecR [Pseudomonas fluorescens Pf-5] Length = 200 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A++ V C C Sbjct: 3 FSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGLRLAQALSQAMEGVGHCRQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEDELCPQCADPRRDDTLLCVVEGPMDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ RIE + E+I A + T+EG+ TAHYI L + +R+A+G+P+G EL+ Sbjct: 122 GIPQLLARIEEQGSFSEVILATNPTVEGEATAHYIAQLLTNKGLITSRIAHGVPLGGELE 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|119469547|ref|ZP_01612451.1| recombination protein recR [Alteromonadales bacterium TW-7] gi|119447082|gb|EAW28352.1| recombination protein recR [Alteromonadales bacterium TW-7] Length = 202 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + LI+ L PG GP+SA+R HL+++ + L A+ + C +C Sbjct: 4 SDSLNQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGSALTKAMTAIGHCQMCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C IC+ +R S + VVE D+ A+E++ LY VL G LSP+D IGP++I Sbjct: 64 CEQPQCDICLSTKRQDSGTLCVVESPTDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +++ I E+I A + ++EG+TTAHYI +V +R+A+GIP+G ELD Sbjct: 124 GLDVLEQKLSQGGINEVILATNPSVEGETTAHYIAQLCHKNNVGASRIAHGIPVGGELDL 183 Query: 186 LDDGTIFEAIRSRT 199 +D T+ A R Sbjct: 184 VDGRTLMHAFSGRR 197 >gi|146307667|ref|YP_001188132.1| recombination protein RecR [Pseudomonas mendocina ymp] gi|166221955|sp|A4XVN4|RECR_PSEMY RecName: Full=Recombination protein recR gi|145575868|gb|ABP85400.1| recombination protein RecR [Pseudomonas mendocina ymp] Length = 199 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L +PG G ++A+R L L+++ LA+A+ V C C + Sbjct: 3 FSPLIRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRCRS 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C+D++RD S++ VVE D+ A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LSEDEVCQLCLDERRDDSLLCVVEGPMDVHAVEQTG-FRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 GI L+ERIE E+I A + T+EG+ TAHYI L G + +R+A+G+P+G EL+ Sbjct: 122 GIPELLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLIASRIAHGMPLGGELEL 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ A+ R + Sbjct: 182 VDGGTLAHALAGRRPI 197 >gi|298244235|ref|ZP_06968041.1| recombination protein RecR [Ktedonobacter racemifer DSM 44963] gi|297551716|gb|EFH85581.1| recombination protein RecR [Ktedonobacter racemifer DSM 44963] Length = 203 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + L++ A++PG G ++A+R T +++ LAEA+ + + CS C N+ Sbjct: 6 PPVAALVEEFAKLPGIGVKTAQRLTFFILRSPNDHARRLAEAIIRVKESIIYCSRCFNIT 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 TDPC IC + R+ V+ VVE+ D+ ALE++ A LYHVL G+LSP++ IG +++ I Sbjct: 66 ETDPCPICGNPSREQDVVCVVEEPLDVLALEKTGAYKGLYHVLHGALSPMNGIGRKELRI 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTA----HYIMDKLKGIDVKITRLAYGIPMGSEL 183 L++R++ + IRE+IFA + EG TA YI ++L ++ +T LA G+P+G +L Sbjct: 126 DELLKRLDHEHIREVIFATNPGFEGDYTAGSIKLYIKNELNLPELHMTSLARGLPIGGDL 185 Query: 184 DYLDDGTIFEAIRSRTVL 201 +Y D T+ AI R L Sbjct: 186 EYADQDTLGRAIEGRREL 203 >gi|296284447|ref|ZP_06862445.1| recombination protein RecR [Citromicrobium bathyomarinum JL354] Length = 197 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 106/197 (53%), Positives = 145/197 (73%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +EIE L LAR+PG GPRSARRA LHLVKK+E L L +A+ ++ + + C ICG Sbjct: 1 MASQEIETLASALARLPGLGPRSARRAVLHLVKKRETALPALLDALLSVQDTLEECRICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NVDT DPC IC D +RDA I VVEDVADLWAL+R+K + +HVLGG LS LD + PED Sbjct: 61 NVDTQDPCGICSDPRRDAKSICVVEDVADLWALDRAKLFSGTFHVLGGRLSALDGVRPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I L+ R+ + E++ A++AT+EGQTTAHY+ ++L+ V+IT+LA+G+P+G ELD Sbjct: 121 LAIPGLLARV-EAGVDEVVLAMNATLEGQTTAHYLAERLEDFPVRITQLAHGLPVGGELD 179 Query: 185 YLDDGTIFEAIRSRTVL 201 YLD+GT+ +A+R+R L Sbjct: 180 YLDEGTLAQALRARRPL 196 >gi|323144820|ref|ZP_08079391.1| recombination protein RecR [Succinatimonas hippei YIT 12066] gi|322415407|gb|EFY06170.1| recombination protein RecR [Succinatimonas hippei YIT 12066] Length = 199 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +E LIK L +PG GPRSA R HL+ ++ + LA+ + K+ LCS C + Sbjct: 3 ASPLLEKLIKSLQIMPGIGPRSAVRIAYHLLDRRREESVQLADTLKEAVEKIGLCSHCRD 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC +R S + VVE +DL A+E S Y VL G LSP+D +GP + Sbjct: 63 YSEEEVCPICASFKRKQSGQLCVVETPSDLLAVESSGNYFGQYFVLHGHLSPIDGVGPTE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI LI+R+ +++ELI A + T+EG TA YI K ++ +++LA G+P+G +LD Sbjct: 123 LGIDILIKRLSAGEVKELILATNPTVEGDATASYIAALAKRYNISVSKLASGVPLGGDLD 182 Query: 185 YLDDGTIFEAIRSRTV 200 +D+ TI ++ R Sbjct: 183 NIDEQTIAASLAHRRP 198 >gi|256820997|ref|YP_003142276.1| recombination protein RecR [Capnocytophaga ochracea DSM 7271] gi|256582580|gb|ACU93715.1| recombination protein RecR [Capnocytophaga ochracea DSM 7271] Length = 206 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 116/196 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + +A++P G R+A R LHL+K+ E+ LA+A+ + + C Sbjct: 1 MDFSSKLLENAVYEIAQLPSIGKRTALRLALHLLKQPEEQSLQLAQAIVALRTHIQYCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ D C IC + RD V+ VVED D+ A+E + YHVLGG +SP+D I P Sbjct: 61 CHNISDVDLCEICANPMRDTGVVCVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SLIE+++ K+ ELI A+S T+EG TT YI +++ + I+ +A GI +G E Sbjct: 121 SNLHIASLIEKVKTGKVTELILALSNTMEGDTTNFYIYKQVESYHITISTIARGIAVGGE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYTDEVTLGRSITQR 196 >gi|212696575|ref|ZP_03304703.1| hypothetical protein ANHYDRO_01113 [Anaerococcus hydrogenalis DSM 7454] gi|212676431|gb|EEB36038.1| hypothetical protein ANHYDRO_01113 [Anaerococcus hydrogenalis DSM 7454] Length = 199 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 124/199 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI+ ++P G +SA R + +V K ++ + ++A+ + +K+ C I Sbjct: 1 MALYPESLIKLIEQFQKLPTIGKKSAERLAMSIVGKDDESVEEFSKALMEVKSKIHPCKI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ + C IC D R ++I V+EDV +L+A+E+S + YH+LGG +SP D + Sbjct: 61 CGNLTEDEICGICKDVSRQENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ED+ I L++RI+ + I E+I AIS+TIEG+TT+ ++ L+ +VK++++A GIP+GS Sbjct: 121 EDLSIDKLLDRIDKENINEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSN 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D T+ A+ R + Sbjct: 181 LEYFDQLTLERALEDRREI 199 >gi|67459064|ref|YP_246688.1| recombination protein RecR [Rickettsia felis URRWXCal2] gi|67004597|gb|AAY61523.1| Recombination protein RecR [Rickettsia felis URRWXCal2] Length = 207 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 90/199 (45%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 7 MNKTNDNDIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCE 66 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD SVI VVE VA+LWA+ERS LYHVLG +LS R Sbjct: 67 ICGNMDTENICCICSSEYRDKSVIAVVETVAELWAMERSSNFKGLYHVLGHNLSAASRQN 126 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + L+ KI+RLA GIP+G Sbjct: 127 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLREHPAKISRLASGIPIGG 186 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 187 ELDYLDEGTLSAAINLRQP 205 >gi|58585003|ref|YP_198576.1| recombinational DNA repair protein RecR [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|73621530|sp|Q5GRP0|RECR_WOLTR RecName: Full=Recombination protein recR gi|58419319|gb|AAW71334.1| Recombinational DNA repair protein RecR [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 201 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 85/191 (44%), Positives = 134/191 (70%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I+NL+ +++P GP S+RR +HL++ KE+++ PLA ++ + + + C +CGN+DT Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASSIKELADLIIECKVCGNLDTQ 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 PC+IC + +RD ++ VVE++ DLWA E+ + +YHVLGG LS ++ IGPE + + + Sbjct: 65 SPCSICTNPKRDTKLMCVVEELGDLWAFEKGSIYSGMYHVLGGRLSAINGIGPEKLNLDN 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 + +R+ KI E+I AI+ T+EGQ T YI++ LK +DVK++RLA GIPMG E+DYLD+G Sbjct: 125 IPKRVTEFKIEEVIIAINPTLEGQVTVQYIIESLKNLDVKVSRLACGIPMGGEIDYLDEG 184 Query: 190 TIFEAIRSRTV 200 T+ A+ SR Sbjct: 185 TLKAALTSRQE 195 >gi|301058419|ref|ZP_07199440.1| recombination protein RecR [delta proteobacterium NaphS2] gi|300447475|gb|EFK11219.1| recombination protein RecR [delta proteobacterium NaphS2] Length = 203 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 2/200 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I + + L+ ++PG G +SA R L +++ +L LA ++ ++ K+ CSI Sbjct: 1 MGIYPEPLVKLVDQFTKLPGIGQKSATRMALFILRSNRELAESLARSLIDVKEKIHFCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPCAIC D QR I VVE D ALE S YHVL G LSPLD +GP Sbjct: 61 CFNLTDEDPCAICRDGQRADGTICVVETPGDQMALEESGVYRGRYHVLHGVLSPLDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180 ED+ I+ L+ R+E ++I+E+I A + T G+TTA +I + K + +TR+A G+PMG Sbjct: 121 EDLRIEKLLGRLEREQIKEIILATNPTTGGETTASFISALISEKHPAINVTRIALGVPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 +L ++D T+ A++ R Sbjct: 181 GDLKFMDTMTLQHALKRRVQ 200 >gi|307611626|emb|CBX01311.1| recombination and repair protein recR [Legionella pneumophila 130b] Length = 197 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 76/193 (39%), Positives = 117/193 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L++ L +PG GP+SA+R HL++ + Q LA + + C C N Sbjct: 3 ALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C +C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+ Sbjct: 63 QTLCTLCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLP 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL++LD Sbjct: 123 KLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDEAVNISQLAHGIPSGGELEFLDG 182 Query: 189 GTIFEAIRSRTVL 201 TI A+++R V+ Sbjct: 183 NTISSALKNRAVI 195 >gi|297616249|ref|YP_003701408.1| recombination protein RecR [Syntrophothermus lipocalidus DSM 12680] gi|297144086|gb|ADI00843.1| recombination protein RecR [Syntrophothermus lipocalidus DSM 12680] Length = 197 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 116/194 (59%), Gaps = 1/194 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + +E LI L ++PG GP+SA+R L ++K + + LA AM KV CS CGN+ Sbjct: 5 RPLEKLIDELLKLPGIGPKSAQRLALFILKMEPSEVRRLAAAMIEAREKVFPCSRCGNLT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC +C D++RD SVI VVE+ D+ ++ER+ LY+VL ++ E + + Sbjct: 65 DQDPCWVCADEKRDESVICVVEEAGDVMSIERTG-YRGLYYVLNQEPHLMEEGALEKLKL 123 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L++ ++ +++E+I A + T++G+ A YI +K VKITR A+G+P+G +++Y D Sbjct: 124 AGLLDMVDKGRVKEIILATNPTVDGELVARYIAGMVKAKGVKITRPAHGLPVGGDIEYSD 183 Query: 188 DGTIFEAIRSRTVL 201 T+ +A+ R + Sbjct: 184 ALTLRKALEGRQEI 197 >gi|322417713|ref|YP_004196936.1| recombination protein RecR [Geobacter sp. M18] gi|320124100|gb|ADW11660.1| recombination protein RecR [Geobacter sp. M18] Length = 197 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 124/196 (63%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L+ L ++PG G +SA R HL+K + L+E++ + KV CS+C Sbjct: 4 FSRSLTRLVGELKKLPGVGEKSALRLAFHLLKYPGN-IEALSESLVQVKEKVRFCSLCFA 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC +RDA+ + VVE+ DL ALERS+A YHVL G+LSPL+ + P D+ Sbjct: 63 ITEDDPCWICS-GERDAAALCVVEEPQDLLALERSRAFRGRYHVLQGALSPLNGVTPRDL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+E +RE++ A + ++EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y Sbjct: 122 RIAELMQRLEGGGVREVLIATNFSVEGEATALYLTRMIKPLGIKVTRLAHGIPIGSDLEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A+ R+ L Sbjct: 182 VDAATVQRAVEGRSEL 197 >gi|254496162|ref|ZP_05109059.1| recombinational DNA repair protein RecR [Legionella drancourtii LLAP12] gi|254354618|gb|EET13256.1| recombinational DNA repair protein RecR [Legionella drancourtii LLAP12] Length = 197 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 77/189 (40%), Positives = 119/189 (62%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 + L++ L +PG GP+SA+R HL++ + Q LA + +++ C C N Sbjct: 4 LNRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMSQINHCQRCMNYTEQ 63 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 CA+C + QRD+S++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+ Sbjct: 64 SFCALCQNPQRDSSLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPK 123 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L I ++I+E+I A+S ++EGQTT H+I L+ + IT+LA+GIP G EL++LD Sbjct: 124 LKNLILEEEIQEVILALSPSVEGQTTIHFIQQLLRDQSINITQLAHGIPSGGELEFLDGN 183 Query: 190 TIFEAIRSR 198 TI A+R+R Sbjct: 184 TIGNALRNR 192 >gi|190571171|ref|YP_001975529.1| recombination protein RecR [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357443|emb|CAQ54877.1| recombination protein RecR [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 197 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 85/192 (44%), Positives = 135/192 (70%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C ICGN+DT Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGNLDTK 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 PC+IC + +RD ++ VVE++ DLWA E+ + +YHVLGG LS ++ IGP+++ + + Sbjct: 65 SPCSICTNPKRDTKLMCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDN 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 + +R+ KI E+I AI+ T+EGQ TA YI++ LK +VKI+RLA GIP+G E+DYLD+G Sbjct: 125 IPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDYLDEG 184 Query: 190 TIFEAIRSRTVL 201 T+ A+ SR + Sbjct: 185 TLKIALTSRQDI 196 >gi|118578741|ref|YP_899991.1| recombination protein RecR [Pelobacter propionicus DSM 2379] gi|166221951|sp|A1AKR3|RECR_PELPD RecName: Full=Recombination protein recR gi|118501451|gb|ABK97933.1| DNA replication and repair protein RecR [Pelobacter propionicus DSM 2379] Length = 197 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 2/195 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + L+ L ++PG G R+A R HL+K + L L+E++ + ++V CSIC + Sbjct: 5 PSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNLT-ALSESLLEVKSRVRSCSICFAI 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 DPCAIC RD I VVE+ DL ALERS A + YHVL G +SPL IGP ++ Sbjct: 64 TEDDPCAICA-GDRDTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSELR 122 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I L+ RI + E++ A + T+EG+ TA Y+ LK + ++I+RLA+GIP+GS+++Y+ Sbjct: 123 IAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIEYV 182 Query: 187 DDGTIFEAIRSRTVL 201 D T+ A++ R L Sbjct: 183 DAATVQWALQGRNQL 197 >gi|237799334|ref|ZP_04587795.1| recombination protein RecR [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022190|gb|EGI02247.1| recombination protein RecR [Pseudomonas syringae pv. oryzae str. 1_6] Length = 200 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEEFCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERIAGQGTFTEVILATNPTVEGEATAHYIAQLLNDKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|54295586|ref|YP_128001.1| recombination and repair protein recR [Legionella pneumophila str. Lens] gi|54298740|ref|YP_125109.1| recombination protein RecR [Legionella pneumophila str. Paris] gi|148361069|ref|YP_001252276.1| recombinational DNA repair protein RecR [Legionella pneumophila str. Corby] gi|296108400|ref|YP_003620101.1| recombination protein RecR [Legionella pneumophila 2300/99 Alcoy] gi|73621494|sp|Q5X1D9|RECR_LEGPA RecName: Full=Recombination protein recR gi|73621496|sp|Q5WT52|RECR_LEGPL RecName: Full=Recombination protein recR gi|172047876|sp|A5IHT0|RECR_LEGPC RecName: Full=Recombination protein recR gi|53752525|emb|CAH13957.1| Recombination and repair protein recR [Legionella pneumophila str. Paris] gi|53755418|emb|CAH16914.1| Recombination and repair protein recR [Legionella pneumophila str. Lens] gi|148282842|gb|ABQ56930.1| recombinational DNA repair protein RecR [Legionella pneumophila str. Corby] gi|295650302|gb|ADG26149.1| recombination protein RecR [Legionella pneumophila 2300/99 Alcoy] Length = 197 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 76/193 (39%), Positives = 117/193 (60%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L++ L +PG GP+SA+R HL++ + Q LA + + C C N Sbjct: 3 ALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C +C + RD++++ VVE AD+ A+E+S + Y VL G +SPLD +GP+DIG+ Sbjct: 63 QTLCTLCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLP 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L E I +KI+E+I A+S ++E QTT H+I LK V I++LA+GIP G EL++LD Sbjct: 123 KLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELEFLDG 182 Query: 189 GTIFEAIRSRTVL 201 TI A+++R V+ Sbjct: 183 NTISSALKNRAVI 195 >gi|255535694|ref|YP_003096065.1| recombination protein RecR [Flavobacteriaceae bacterium 3519-10] gi|255341890|gb|ACU08003.1| Recombination protein RecR [Flavobacteriaceae bacterium 3519-10] Length = 225 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 114/196 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + ++ ++ +PG G +SA R LHL+K+ E L +++ + ++ C Sbjct: 23 MDYPSKVLAKAVEEISGLPGIGKKSALRLALHLLKQPETQAVALGDSLKKLVTEIKYCRE 82 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N + C IC + +R +I VVEDV D+ A+E + Y VLGG +SP++ IGP Sbjct: 83 CHNFSDHEVCDICANPKRTEEIICVVEDVRDVMAIENTGKYRGKYLVLGGKISPMEGIGP 142 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I S+ +++E +E+IFA+SAT+EG TTA+YI K K V + +A GI +G E Sbjct: 143 NQLNISSIGKKLEKAGAKEIIFALSATMEGDTTAYYIYRKFKDSGVNFSTIARGISVGDE 202 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ ++ +I++R Sbjct: 203 LEYADEISLGRSIQNR 218 >gi|88607618|ref|YP_505551.1| recombination protein RecR [Anaplasma phagocytophilum HZ] gi|123494636|sp|Q2GJA0|RECR_ANAPZ RecName: Full=Recombination protein recR gi|88598681|gb|ABD44151.1| recombination protein RecR [Anaplasma phagocytophilum HZ] Length = 194 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 83/193 (43%), Positives = 128/193 (66%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + +++PG GP S+RR LHL++ + ++ PLA + + C IC N+D Sbjct: 2 DISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLDV 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 T PC+IC D +RD S++ +VE++ DLWA E+ + +YHVLGG LS L +GPED+ + Sbjct: 62 TSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNMS 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 S+ ER+ + ++E+I A + ++GQ T HYI +K VK+TRLA GIP+G E+DYLD+ Sbjct: 122 SIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTGVKVTRLACGIPLGGEIDYLDE 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR ++ Sbjct: 182 GTLRAALSSRYII 194 >gi|296533584|ref|ZP_06896152.1| recombination protein R [Roseomonas cervicalis ATCC 49957] gi|296266092|gb|EFH12149.1| recombination protein R [Roseomonas cervicalis ATCC 49957] Length = 200 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 98/194 (50%), Positives = 134/194 (69%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++E L+ +LAR+PG G RSARRA L L++ L+ PLA+A+ V C ICGN+ Sbjct: 6 PDQVERLVAMLARLPGLGRRSARRAALKLLQDPGGLMLPLAQALHETAEAVRPCRICGNL 65 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 DT DPC IC D R+ V+ VVE V+DLWAL+R+ LYHVLGG LS L +GPED+ Sbjct: 66 DTEDPCRICTDPGREQDVVCVVEGVSDLWALQRAHVHRGLYHVLGGVLSALSGVGPEDLR 125 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I +L+ER+ +IRE+I A+ AT+EG TTAHY+ D+L+ + V +TRLA G+PMG LD + Sbjct: 126 ITALLERVAAGEIREVILALPATVEGATTAHYLTDRLRPMGVAVTRLAQGVPMGGALDVM 185 Query: 187 DDGTIFEAIRSRTV 200 DDGT+ A+++R Sbjct: 186 DDGTLAAALKARRP 199 >gi|260063519|ref|YP_003196599.1| recombination protein RecR [Robiginitalea biformata HTCC2501] gi|88782963|gb|EAR14137.1| recombination protein recR [Robiginitalea biformata HTCC2501] Length = 208 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 130/196 (66%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +IT K + + ++++PG G R+A R LHL+++ + LAEA+ ++ + +C C Sbjct: 1 MEITSKLLGKAVDEVSQLPGIGKRTALRLVLHLLRQPKARTEKLAEALTSLRSGICRCRE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ ++ C IC +RD S+I VVED+ D+ A+E + LYHVLGG +SP++ IGP Sbjct: 61 CHNISDSERCEICASPKRDRSLICVVEDIRDIMAIESTGHYRGLYHVLGGKISPMEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SL+ER+ +RELI A+SAT+EG TT Y+ +L+G++V+++ +A GIP+G + Sbjct: 121 QDLQIASLVERVRDGGVRELILALSATMEGDTTNFYLYKQLEGVEVELSTIARGIPVGDD 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYADEVTLGRSILQR 196 >gi|42525063|ref|NP_970443.1| DNA repair and genetic recombination protein [Bdellovibrio bacteriovorus HD100] gi|73621467|sp|Q6MH30|RECR_BDEBA RecName: Full=Recombination protein recR gi|39577274|emb|CAE81097.1| DNA repair and genetic recombination protein [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 124/199 (62%), Gaps = 6/199 (3%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E L+ L+R+PG GP++A+R ++++ + L+EA+ + +V C C N Sbjct: 6 ALEKLVHELSRLPGIGPKTAQRLAYYILRTGNEYPERLSEALLRVKAEVHDCPTCFNYTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 TD C C D R I VVE+ +D+ +E S A YHVL G++SPL+ IGP+++ I+ Sbjct: 66 TDICRYCEDSHRSDESICVVEEPSDIMRIESSGAFRGRYHVLHGAISPLEGIGPKELKIK 125 Query: 129 SLIERIEV------KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 LI+R+E I+E+I A+ A +EG TT Y+ +L+G +K++R+A+G+P+GS+ Sbjct: 126 ELIDRVEDGLSGTGPAIKEIILALDADLEGDTTILYLAKQLQGKGLKLSRIAHGVPIGSD 185 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +D++DD T+ A+++R L Sbjct: 186 IDFVDDRTMGRALQNRVEL 204 >gi|172045676|sp|A8F1L4|RECR_RICM5 RecName: Full=Recombination protein recR Length = 201 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNETNDNDIDQLIYLFSKLPGLGSRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNIDTENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTVSAAINLRQP 199 >gi|212694992|ref|ZP_03303120.1| hypothetical protein BACDOR_04529 [Bacteroides dorei DSM 17855] gi|212662445|gb|EEB23019.1| hypothetical protein BACDOR_04529 [Bacteroides dorei DSM 17855] Length = 198 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 79/191 (41%), Positives = 126/191 (65%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +E + A++PG G ++A R LHL+++ ++ AM + ++V C +C N+ Sbjct: 2 LLEKAVGEFAKLPGVGRKTAMRLVLHLLRQDTAVVEAFGNAMITLKHEVKYCKVCHNISD 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 T+ C IC + RDAS I VVE + D+ A+E ++ LYHVLGG +SP+D IGP D+ I+ Sbjct: 62 TETCRICSNPARDASTICVVESIRDVMAVEATQQYRGLYHVLGGVISPMDGIGPSDLQIE 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 SL+ER++ +++E+I A+S+T+EG TT YI KL G+DVK++ +A GI +G EL+Y D+ Sbjct: 122 SLVERVKGGEVKEVILALSSTMEGDTTNFYISRKLDGMDVKLSVIARGISIGDELEYTDE 181 Query: 189 GTIFEAIRSRT 199 T+ +I +RT Sbjct: 182 VTLGRSIINRT 192 >gi|315126894|ref|YP_004068897.1| recombination protein recR [Pseudoalteromonas sp. SM9913] gi|315015408|gb|ADT68746.1| recombination protein recR [Pseudoalteromonas sp. SM9913] Length = 202 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + +LI+ L PG GP+SA+R HL+++ + L A+ V C C Sbjct: 4 SDSLTSLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAVGHCQSCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C IC+ +R S ++ VVE D+ A+E++ LY VL G LSP+D IGP++I Sbjct: 64 TEQAQCDICLSTKRQDSGILCVVESPTDVLAIEQTGQYKGLYFVLMGHLSPIDGIGPKEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +++ I E+I A + ++EG+TTAHYI +V +R+A+GIP+G ELD Sbjct: 124 GLDVLEQKLAQGGINEVILATNPSVEGETTAHYIAQLCHKNNVGASRIAHGIPVGGELDL 183 Query: 186 LDDGTIFEAIRSRT 199 +D T+ A R Sbjct: 184 VDGMTLMHAFSGRR 197 >gi|332291051|ref|YP_004429660.1| recombination protein RecR [Krokinobacter diaphorus 4H-3-7-5] gi|332169137|gb|AEE18392.1| recombination protein RecR [Krokinobacter diaphorus 4H-3-7-5] Length = 205 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 122/196 (62%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K +EN + ++++PG G R+A R LHL+++ E L EA+ + + + C Sbjct: 1 MEFSSKLLENAVYEMSQLPGVGKRTALRLVLHLLRQPETQTHHLTEALNTMRDTIKFCKK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ C IC + RD S++ VVEDV D+ A+E + LYHVLGG +SPLD IGP Sbjct: 61 CHNISDVALCEICSNPNRDESIVCVVEDVRDVMAIENTSQYRGLYHVLGGKISPLDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +D+ I SLI+R + ++E+IFA+S+T+EG TT YI +L+ D+ + +A GI +G E Sbjct: 121 QDLNIFSLIDRAKSGVVKEVIFALSSTMEGDTTNFYIYRQLEAYDIATSTIARGIAVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ T+ +I R Sbjct: 181 LEYADEVTLGRSILHR 196 >gi|108803359|ref|YP_643296.1| DNA replication and repair protein RecR [Rubrobacter xylanophilus DSM 9941] gi|122382097|sp|Q1AYP4|RECR_RUBXD RecName: Full=Recombination protein recR gi|108764602|gb|ABG03484.1| DNA replication and repair protein RecR [Rubrobacter xylanophilus DSM 9941] Length = 199 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 120/199 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +E LI L+R+P GPRSA+R H+++ +++ LAEA+ + ++ C Sbjct: 1 MATYARSVERLIAELSRLPTIGPRSAQRIAFHIIRTRKEEALALAEALREVKERIRPCRR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC D +RD SVI VVED D+ +ER+ LYHVLGG+LSPLD + P Sbjct: 61 CFNLTEGEECDICRDPRRDRSVICVVEDPYDIGPIERTGEYRGLYHVLGGALSPLDGVEP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ED+ I L+ER+ + RELI A + G+ TA +I +++ + V++T LA G+P+G + Sbjct: 121 EDLRIAELVERVRSEGTRELILATNPNTTGEATAMFIAQEVRELPVRVTALASGLPVGGD 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T+ A R L Sbjct: 181 LEYADEVTLGRAFAGRREL 199 >gi|296393612|ref|YP_003658496.1| recombination protein RecR [Segniliparus rotundus DSM 44985] gi|296180759|gb|ADG97665.1| recombination protein RecR [Segniliparus rotundus DSM 44985] Length = 212 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+ A+R HLV + + L A+A I + V C ICG Sbjct: 1 MFEGPVQDLIDELSRLPGVGPKGAQRIAFHLVGSPKPEIDRLVSALAKIRDGVRFCDICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ C +C D +RD + I VV D+ A+ER++ + YHVLGG+L+PL IGP+ Sbjct: 61 NIAADVTCRVCADARRDLTRICVVSQPKDVAAIERTREFHGRYHVLGGALNPLAGIGPDR 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + ++ L+ R+ + + E+I A EG+ TA Y+ L D+++TRLA G+PM Sbjct: 121 LRVKELLTRLGASADGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R L Sbjct: 181 GGDLEFADEMTLGRALAGRRAL 202 >gi|325474111|gb|EGC77299.1| recombination protein recR [Treponema denticola F0402] Length = 195 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I+++I + +PG G +SA R HL+K+ LAEA++ ++ K+ C+ICG+ Sbjct: 3 AIDSVIDSFSLLPGIGHKSAARIAYHLLKQGPADALRLAEAVSTLHEKIHPCTICGSYTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C+IC D+ RD + I VV D+ + L+HVLGG ++PL+ IGP+ + I Sbjct: 63 DEICSICADETRDRATICVVGFPQDVNTISSIPEYRGLFHVLGGLIAPLEGIGPDQLHIS 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 LI RI I E+I A + TIEG TTA YI L+ + V ITRLA G+P+G +L+Y D Sbjct: 123 ELIRRIHEGGITEVILATNPTIEGDTTALYIQKILQDLPVNITRLASGLPVGGDLEYADR 182 Query: 189 GTIFEAIRSRTV 200 T+ ++ R Sbjct: 183 LTLARSLNGRIK 194 >gi|238754275|ref|ZP_04615632.1| hypothetical protein yruck0001_22240 [Yersinia ruckeri ATCC 29473] gi|238707522|gb|EEP99882.1| hypothetical protein yruck0001_22240 [Yersinia ruckeri ATCC 29473] Length = 191 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 1/188 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R HL+++ LA+A+ +++ C+ C D C Sbjct: 1 MESLRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQDSCT 60 Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R + I VVE AD+ A+E++ Y VL G LSPLD IGP DIG+ L + Sbjct: 61 ICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLDRLEQ 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R+ + + E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLSSETLSEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDGTTLS 180 Query: 193 EAIRSRTV 200 ++ R Sbjct: 181 HSLAGRHP 188 >gi|323465899|gb|ADX69586.1| Recombination protein recR [Lactobacillus helveticus H10] Length = 190 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 115/189 (60%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 I R+PG G ++A R + + E+ + ++A+ + N + C ICGN+ + C Sbjct: 2 IDAYMRLPGVGEKTATRLAFYTMDMPEKDVEDFSKALIQVKNDIHQCPICGNITEKEVCD 61 Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIER 133 IC + RD + I+VVE DL A E + LYHVL G LSP+D IGPE+I I+SLI R Sbjct: 62 ICSNPNRDQTTIMVVEQPKDLMAFEEMGEYDGLYHVLHGVLSPMDGIGPEEINIKSLITR 121 Query: 134 IEVKKI-RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 ++ +E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y + T+ Sbjct: 122 LQKNDDVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANSITLK 181 Query: 193 EAIRSRTVL 201 A++ RT L Sbjct: 182 RAVQGRTAL 190 >gi|227824619|ref|ZP_03989451.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905118|gb|EEH91036.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 198 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 125/194 (64%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K + L + L ++PG G +SA R + H++ K + LA A+ + ++V LC+ C N+ Sbjct: 5 KPLARLHEQLRKLPGIGSKSALRLSYHVLDMKRSDVEALAAALVAVKDQVHLCTSCFNLC 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C IC D++RD +I VVE+ D+ A+ER+K +YHVL G LSPLD +GP+ + I Sbjct: 65 EGTRCEICEDEKRDHGLICVVEEPQDVAAMERTKGFEGVYHVLHGVLSPLDGVGPDQLKI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R++ + E+I A ++ +EG+ TA Y+ ++ + +K++R+A+G+PMG +L+Y D Sbjct: 125 RELMRRLQDGSVHEVILATNSDVEGEATAAYLASLIRPLGIKVSRIAHGLPMGGDLEYAD 184 Query: 188 DGTIFEAIRSRTVL 201 + T+++A+ +R L Sbjct: 185 ELTLYKALENRREL 198 >gi|251772824|gb|EES53384.1| recombination protein RecR [Leptospirillum ferrodiazotrophum] Length = 215 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 124/208 (59%), Gaps = 8/208 (3%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + ++L+ + R+PG G ++A R HL++ E LA A++ + ++ C Sbjct: 7 MGSSLFPAPFQDLVDLFRRLPGIGTKTATRLAFHLLQSSESERQELASAVSTLKERLLPC 66 Query: 61 SICGNV--------DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG 112 S C N+ CAIC+D RD++++IVVED+ L+++E+S YHVL G Sbjct: 67 SECRNIVASPPPESPEVPRCAICLDPARDSTILIVVEDIQTLYSIEKSGEFRGRYHVLEG 126 Query: 113 SLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITR 172 LSPL+ I PE + ++ L++R+E IRE++ A S T +G+ TA Y+ +K + ++++R Sbjct: 127 RLSPLEGIAPEMLRVRELLQRLENPDIREVVLATSPTTDGEATALYLSRLVKPLGIRVSR 186 Query: 173 LAYGIPMGSELDYLDDGTIFEAIRSRTV 200 +A+GIP+G EL+Y+D+ T+ A+ R Sbjct: 187 IAFGIPVGLELEYVDEVTLIRAVEGRHP 214 >gi|300775556|ref|ZP_07085417.1| recombination protein R [Chryseobacterium gleum ATCC 35910] gi|300505583|gb|EFK36720.1| recombination protein R [Chryseobacterium gleum ATCC 35910] Length = 203 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 115/196 (58%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + + ++ +PG G ++A R LHL+K+ L ++ N+ N++ C Sbjct: 1 MDYPSKVLAKAVDEISGLPGIGRKTALRLALHLLKQPSSRAVSLGNSLINLVNEIKYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N D C IC +++R+ +I +VEDV D+ A+E + Y +LGG +SP++ +GP Sbjct: 61 CHNFSDFDVCEICSNEKRNGELICIVEDVRDVIAIENTGKYTGKYLILGGKISPMEGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + I S+ +++ K++E IFA+SAT+EG TTA+YI K K +V + +A GI +G E Sbjct: 121 GQLNIPSIEKKLNEGKVKEFIFALSATMEGDTTAYYIYKKFKNFNVNFSSIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ ++ +I +R Sbjct: 181 LEYADEISLGRSIINR 196 >gi|157964523|ref|YP_001499347.1| recombination protein RecR [Rickettsia massiliae MTU5] gi|157844299|gb|ABV84800.1| Recombination protein RecR [Rickettsia massiliae MTU5] Length = 203 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 126/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 3 MNETNDNDIDQLIYLFSKLPGLGSRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCK 62 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R Sbjct: 63 ICGNIDTENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQN 122 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L++R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 123 PSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 182 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 183 ELDYLDEGTVSAAINLRQP 201 >gi|42520978|ref|NP_966893.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila melanogaster] gi|59798344|sp|Q73FZ1|RECR_WOLPM RecName: Full=Recombination protein recR gi|42410719|gb|AAS14827.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila melanogaster] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 87/191 (45%), Positives = 136/191 (71%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ IGP+++ + + Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLDT 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 +++R+ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G Sbjct: 125 ILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184 Query: 190 TIFEAIRSRTV 200 T+ A+ SR Sbjct: 185 TLRIALTSRQE 195 >gi|158520557|ref|YP_001528427.1| recombination protein RecR [Desulfococcus oleovorans Hxd3] gi|226738998|sp|A8ZU38|RECR_DESOH RecName: Full=Recombination protein recR gi|158509383|gb|ABW66350.1| recombination protein RecR [Desulfococcus oleovorans Hxd3] Length = 199 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 119/196 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I N I L+R+PG G ++A R +HL+ ++ + LA ++ ++ +CS+C Sbjct: 4 YPPSIRNAISHLSRLPGIGQKTAERLAMHLLHVPDRAVHELARSLVDLKKNTRMCSVCFT 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + T CAIC D R+AS++ VVE ++ A+E++ A +YHVL G LSP+D IGP+DI Sbjct: 64 LSDTPVCAICGDPDRNASLLCVVEGPTEVMAIEKTAAFKGVYHVLHGVLSPMDGIGPDDI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L++R++ ++E++ A +EG+ TA Y+++ LK V +TR+A G+P G E+ Y Sbjct: 124 RIRELVDRVKKGIVKEIVLATDTRVEGEATAAYLVEVLKPFPVTVTRIASGMPAGGEVRY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D T+ A+ R L Sbjct: 184 SDPVTLKNAMEKRYAL 199 >gi|34580476|ref|ZP_00141956.1| recombination protein RecR [Rickettsia sibirica 246] gi|229586721|ref|YP_002845222.1| recombination protein RecR [Rickettsia africae ESF-5] gi|259563704|sp|C3PNG9|RECR_RICAE RecName: Full=Recombination protein recR gi|28261861|gb|EAA25365.1| recombination protein RecR [Rickettsia sibirica 246] gi|228021771|gb|ACP53479.1| Recombination protein RecR [Rickettsia africae ESF-5] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 125/199 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNETNDNDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNMDTENMCRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTVSAAINLRQP 199 >gi|300857564|ref|YP_003782547.1| recombination protein [Corynebacterium pseudotuberculosis FRC41] gi|300685018|gb|ADK27940.1| recombination protein [Corynebacterium pseudotuberculosis FRC41] gi|302205304|gb|ADL09646.1| Recombination protein RecR [Corynebacterium pseudotuberculosis C231] gi|302329858|gb|ADL20052.1| Recombination protein RecR [Corynebacterium pseudotuberculosis 1002] gi|308275544|gb|ADO25443.1| Recombination protein RecR [Corynebacterium pseudotuberculosis I19] Length = 218 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R HL+ + + L +A+ + + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLHVEPADIARLQDALGAVRDGVTFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ C IC D RD I VVE+ D+ +ER+ N YHVLGG+L PL IGP + Sbjct: 61 NISRESVCRICADSGRDRGTICVVEEPKDIQVIERTGEYNGRYHVLGGALDPLANIGPRE 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++RI + E+I A EG+ TA Y+ L+ Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPDAPLYDSSPTVTEVILATDPNTEGEATASYLARLLR 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+ ++RLA G+P+G +L+++D+ T+ A+ R + Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTI 218 >gi|71734841|ref|YP_275477.1| recombination protein RecR [Pseudomonas syringae pv. phaseolicola 1448A] gi|289626816|ref|ZP_06459770.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646517|ref|ZP_06477860.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str. 2250] gi|298487770|ref|ZP_07005811.1| Recombination protein RecR [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123635795|sp|Q48GK6|RECR_PSE14 RecName: Full=Recombination protein recR gi|71555394|gb|AAZ34605.1| recombination protein RecR [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157862|gb|EFH98941.1| Recombination protein RecR [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323988|gb|EFW80072.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str. B076] gi|320328124|gb|EFW84129.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str. race 4] gi|330869031|gb|EGH03740.1| recombination protein RecR [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330986555|gb|EGH84658.1| recombination protein RecR [Pseudomonas syringae pv. lachrymans str. M301315] Length = 200 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|116491392|ref|YP_810936.1| recombinational DNA repair protein (RecF pathway) [Oenococcus oeni PSU-1] gi|290890958|ref|ZP_06554022.1| hypothetical protein AWRIB429_1412 [Oenococcus oeni AWRIB429] gi|122276426|sp|Q04E51|RECR_OENOB RecName: Full=Recombination protein recR gi|116092117|gb|ABJ57271.1| Recombinational DNA repair protein (RecF pathway) [Oenococcus oeni PSU-1] gi|290479357|gb|EFD88017.1| hypothetical protein AWRIB429_1412 [Oenococcus oeni AWRIB429] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 113/199 (56%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG- 64 + I LI+ +++PG G +SA R + + + + A +++ + + C ICG Sbjct: 3 YPEAIAKLIESYSKLPGIGRKSATRLAFYTLGMSDDDVKNFARSLSASKSDLTFCRICGF 62 Query: 65 -NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 DPC IC D+ RD S I VVE+ D A+E + + LYHVL G LSP++ GPE Sbjct: 63 ITSKDDDPCVICSDESRDQSKIFVVENSQDEMAIENTHDYHGLYHVLNGVLSPMEGRGPE 122 Query: 124 DIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI I SLI R+ +++E+I + A+ EG+ T Y+ ++ +K+TRLA G+ +G+ Sbjct: 123 DINITSLITRLSDHSEVKEVIIGLDASTEGEATTLYLARLIRPSGIKVTRLARGLSVGTN 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D T+ +A+ RT + Sbjct: 183 VDYADQLTLTQAVNGRTEI 201 >gi|255324354|ref|ZP_05365473.1| recombination protein RecR [Corynebacterium tuberculostearicum SK141] gi|311741091|ref|ZP_07714916.1| recombination protein R [Corynebacterium pseudogenitalium ATCC 33035] gi|255298573|gb|EET77871.1| recombination protein RecR [Corynebacterium tuberculostearicum SK141] gi|311303893|gb|EFQ79971.1| recombination protein R [Corynebacterium pseudogenitalium ATCC 33035] Length = 218 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC Sbjct: 1 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGAVRDGVTFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP D Sbjct: 61 NISREDVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPRD 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++R+ I E+I A EG+ TA Y++ L+ Sbjct: 121 LNISTLLQRLGGVLPDRELADSTPEAPLYDATPTIHEVILATDPNTEGEATAAYLVRLLR 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+KITRLA G+P+G +L+++D+ T+ A+ R + Sbjct: 181 DFPDLKITRLASGMPLGGDLEFVDELTLSRALSGRLTI 218 >gi|157803801|ref|YP_001492350.1| recombination protein RecR [Rickettsia canadensis str. McKiel] gi|172045660|sp|A8EYY2|RECR_RICCK RecName: Full=Recombination protein recR gi|157785064|gb|ABV73565.1| recombination protein RecR [Rickettsia canadensis str. McKiel] Length = 199 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 124/192 (64%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I+ LI + +++PG G RSARR L+L++ K+ L L + NI K+ C ICGN+DT Sbjct: 6 DIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLINIDKKIVKCEICGNMDT 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC + RD SVI +VE VA+LWA+ERS LYHVLG +LS R P + + Sbjct: 66 ENICRICSSEYRDKSVIAIVETVAELWAMERSGNFKGLYHVLGYNLSAASRKNPSMLRLP 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G ELDYLD+ Sbjct: 126 ELLTRCFAANIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGGELDYLDE 185 Query: 189 GTIFEAIRSRTV 200 GT+ AI R Sbjct: 186 GTLSAAINLRQP 197 >gi|188997275|ref|YP_001931526.1| recombination protein RecR [Sulfurihydrogenibium sp. YO3AOP1] gi|188932342|gb|ACD66972.1| recombination protein RecR [Sulfurihydrogenibium sp. YO3AOP1] Length = 200 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 128/199 (64%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I + I+ +I ++R+PG+G ++A+R ++L+K + L +A + +KV LC Sbjct: 1 MNIVPETIQQVISEISRLPGYGEKTAQRLAVNLLKMPKGEAVDLVRHLALMLDKVHLCRE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + C +C D+ RD SVI VVE+ D + +E + + LYHVLGG LSPL+ IGP Sbjct: 61 CGIFTEKEICDVCSDESRDRSVICVVEESFDAFMIENTGKYSGLYHVLGGRLSPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I+SLI+RI+ ++E+IFA + T+EG+ TA+YI + +K + I+RLAYG+P G Sbjct: 121 EKLNIKSLIDRIKKLNVKEIIFATNPTVEGEATANYIHNLIKNYPITISRLAYGLPFGGV 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ DD T+ +A+ ++ +L Sbjct: 181 LENADDFTLAKALENKQIL 199 >gi|77360146|ref|YP_339721.1| recombination protein recR [Pseudoalteromonas haloplanktis TAC125] gi|123589320|sp|Q3IKN2|RECR_PSEHT RecName: Full=Recombination protein recR gi|76875057|emb|CAI86278.1| recombination protein recR [Pseudoalteromonas haloplanktis TAC125] Length = 202 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + LI+ L PG GP+SA+R HL+++ + L A+ V C C Sbjct: 4 SASLTQLIEALRCQPGIGPKSAQRIAFHLLERDRKGGTQLGNALTKAMTAVGHCESCRTF 63 Query: 67 DTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C IC+ +R S ++ VVE +D+ A+E++ LY VL G LSP+D IGP++I Sbjct: 64 CEQSQCDICLSTKRQDSGILCVVESPSDVLAIEQTGQYLGLYFVLMGHLSPIDGIGPKEI 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L ++ I E+I A + T+EG+TTAHYI V +R+A+GIP+G ELD Sbjct: 124 GLDVLETKLAQSGISEVILATNPTVEGETTAHYIAQLCHKYKVGASRIAHGIPVGGELDL 183 Query: 186 LDDGTIFEAIRSRT 199 +D T+ A R Sbjct: 184 VDGTTLMHAFSGRR 197 >gi|332882716|ref|ZP_08450327.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679218|gb|EGJ52204.1| recombination protein RecR [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 206 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 117/196 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +EN + + ++P G R+A R LHL+K+ E+ LA+A+ + + C Sbjct: 1 MDFSSKLLENAVYEIGQLPSIGKRTALRLALHLLKQPEEQTLQLAQALVALRTHIVYCKN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC + RD VI VVED D+ A+E + YHVLGG +SP+D I P Sbjct: 61 CHNISDVEICEICANPVRDTGVICVVEDFRDVMAIENTGQFFGQYHVLGGKISPIDGIAP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++ I SL+E+++ K+ ELI A+S T+EG TT YI +++ ++ I+ +A GI +G+E Sbjct: 121 SNLHIASLVEKVKQGKVNELILALSNTMEGDTTNFYIYKQVEPYNITISTIARGIAVGAE 180 Query: 183 LDYLDDGTIFEAIRSR 198 ++Y D+ T+ +I R Sbjct: 181 IEYTDEITLGRSIAHR 196 >gi|325954178|ref|YP_004237838.1| recombination protein recR [Weeksella virosa DSM 16922] gi|323436796|gb|ADX67260.1| Recombination protein recR [Weeksella virosa DSM 16922] Length = 205 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 115/197 (58%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K +E + ++++PG G R+A R LH++ + LAEA+ ++ + C Sbjct: 1 MSNYPSKVLERAVNEMSQLPGIGKRTALRLVLHMLNRPHTQTLRLAEALTHLVEDIQYCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C + T C IC + RD S+I VVEDV D+ A+E + +YHVLGG +SP++ IG Sbjct: 61 TCHTLSDTPICEICSNPLRDHSIICVVEDVRDVMAIENTGQYRGVYHVLGGRISPMEGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + I SL++R + +E+IFA+S+T+EG TT Y+ +LK + T +A GI +G Sbjct: 121 PSQLKIDSLVKRAAEESTKEIIFALSSTMEGDTTVFYLFKQLKDFPLFYTTIARGIGVGD 180 Query: 182 ELDYLDDGTIFEAIRSR 198 EL+Y D+ T+ +I +R Sbjct: 181 ELEYADEATLIRSIENR 197 >gi|118586635|ref|ZP_01544075.1| recombination protein [Oenococcus oeni ATCC BAA-1163] gi|118432950|gb|EAV39676.1| recombination protein [Oenococcus oeni ATCC BAA-1163] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 113/199 (56%), Gaps = 3/199 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG- 64 + I LI+ +++PG G +SA R + + + + A +++ + + C ICG Sbjct: 3 YPEAISKLIESYSKLPGIGRKSATRLAFYTLGMSDDDVKNFARSLSASKSDLTFCRICGF 62 Query: 65 -NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 DPC IC D+ RD S I VVE+ D A+E + + LYHVL G LSP++ GPE Sbjct: 63 ITSKDDDPCVICSDESRDQSKIFVVENSQDEMAIENTHDYHGLYHVLNGVLSPMEGRGPE 122 Query: 124 DIGIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 DI I SLI R+ +++E+I + A+ EG+ T Y+ ++ +K+TRLA G+ +G+ Sbjct: 123 DINITSLITRLSDHSEVKEVIIGLDASTEGEATTLYLARLIRPSGIKVTRLARGLSVGTN 182 Query: 183 LDYLDDGTIFEAIRSRTVL 201 +DY D T+ +A+ RT + Sbjct: 183 VDYADQLTLTQAVNGRTEI 201 >gi|332283345|ref|YP_004415256.1| recombination protein RecR [Pusillimonas sp. T7-7] gi|330427298|gb|AEC18632.1| recombination protein RecR [Pusillimonas sp. T7-7] Length = 202 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 1/200 (0%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M+ + + + +LI+ L R+PG G RSARR HL++ L+ A+A+ + Sbjct: 1 MESPLPEPEPLTSLIEALRRLPGVGVRSARRMAYHLLQYDISGAEQLSRALASAAQGLRH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C D CA C + +RD S++ VVE AD +E S LY+VL G L+PL+ Sbjct: 61 CARCNGFAEEDVCATCTNPKRDPSLLCVVETPADQNMIESSHGYRGLYYVLMGRLTPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GP + LI+R+ ++E+I A + T EG+TTAHY+ + L+ + ++RLA G+P Sbjct: 121 VGPRALQFDRLIQRVSDGIVQEVILATNFTAEGETTAHYLSELLRARGLTVSRLARGVPA 180 Query: 180 GSELDYLDDGTIFEAIRSRT 199 GSEL+Y+D GTI A+ R Sbjct: 181 GSELEYVDAGTIAWALMERR 200 >gi|62263541|gb|AAX78170.1| unknown protein [synthetic construct] Length = 235 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 27 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 86 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 87 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 146 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 147 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 205 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 206 GELEYLDQQTLLHAFNARTNI 226 >gi|58696821|ref|ZP_00372348.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila simulans] gi|58698616|ref|ZP_00373512.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila ananassae] gi|225630849|ref|YP_002727640.1| recombination protein RecR [Wolbachia sp. wRi] gi|58534861|gb|EAL58964.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila ananassae] gi|58536979|gb|EAL60136.1| recombination protein RecR [Wolbachia endosymbiont of Drosophila simulans] gi|225592830|gb|ACN95849.1| recombination protein RecR [Wolbachia sp. wRi] Length = 201 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 86/191 (45%), Positives = 136/191 (71%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ IGP+++ + + Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLDT 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 +++++ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G Sbjct: 125 ILKKVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184 Query: 190 TIFEAIRSRTV 200 T+ A+ SR Sbjct: 185 TLRIALTSRQE 195 >gi|304312975|ref|YP_003812573.1| Recombinational DNA repair protein (RecF pathway) [gamma proteobacterium HdN1] gi|301798708|emb|CBL46941.1| Recombinational DNA repair protein (RecF pathway) [gamma proteobacterium HdN1] Length = 198 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 112/195 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 I L+ L ++PG GP+SA+R L L+++ + LA+A+ N V C C + Sbjct: 4 SPAIARLVDALRQLPGVGPKSAQRMALFLLERNRRAAANLADALQNALATVRRCRQCRLL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC +RD S++ VVE AD++A+E+S A +Y VL G LSPLD IGPE +G Sbjct: 64 CENELCEICAHSERDHSLLCVVESPADVFAIEQSGAFRGVYFVLSGRLSPLDGIGPEQLG 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L R+ I ELI A SAT+EG+ TA Y+ + + TR+A G+P+G EL+ + Sbjct: 124 LVDLQARLANGGINELILATSATLEGEATAFYLSEMANEAGITATRIAQGVPIGGELEQV 183 Query: 187 DDGTIFEAIRSRTVL 201 D T+ A+ R L Sbjct: 184 DSHTLSLALAGRKRL 198 >gi|57238988|ref|YP_180124.1| recombination protein RecR [Ehrlichia ruminantium str. Welgevonden] gi|58578924|ref|YP_197136.1| recombination protein RecR [Ehrlichia ruminantium str. Welgevonden] gi|58616983|ref|YP_196182.1| recombination protein RecR [Ehrlichia ruminantium str. Gardel] gi|57161067|emb|CAH57974.1| putative recombination protein RecR [Ehrlichia ruminantium str. Welgevonden] gi|58416595|emb|CAI27708.1| Recombination protein RecR [Ehrlichia ruminantium str. Gardel] gi|58417550|emb|CAI26754.1| Recombination protein RecR [Ehrlichia ruminantium str. Welgevonden] Length = 195 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 85/193 (44%), Positives = 130/193 (67%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + A++P G S+RR L+L++ +E+++ PLA ++ + K CSIC N+D Sbjct: 2 DINKLINMFAKLPNLGSSSSRRIVLYLLRNREEIMLPLASSIQELALKTKECSICFNIDV 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC+IC D +RD ++ +VE++ DLWA E+ K +YHVLGG+LS + IGP+ + Sbjct: 62 KSPCSICSDVKRDQKLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNFN 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 ++I RI+ ++E+I IS T++GQ T HYI +K + VK+TRLA GIPMG E+DYLD+ Sbjct: 122 NIIARIQNSGVQEVIIGISNTMDGQVTTHYITQMIKKLGVKVTRLACGIPMGGEIDYLDE 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR V+ Sbjct: 182 GTLSAALSSRYVI 194 >gi|19551495|ref|NP_599497.1| recombination protein RecR [Corynebacterium glutamicum ATCC 13032] gi|62389142|ref|YP_224544.1| recombination protein RecR [Corynebacterium glutamicum ATCC 13032] gi|24212182|sp|Q8NTQ8|RECR_CORGL RecName: Full=Recombination protein recR gi|21323008|dbj|BAB97637.1| Recombinational DNA repair protein [Corynebacterium glutamicum ATCC 13032] gi|41324475|emb|CAF18815.1| DNA repair protein (RecF pathway) [Corynebacterium glutamicum ATCC 13032] Length = 218 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R HL+ + L EA+ + + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D RD I VVE+ D+ +ER+ + YHVLGG+L PL IGP + Sbjct: 61 NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++RI +RE+I A EG+ TA Y+ LK Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+ I+RLA G+P+G +L+++D+ T+ A+ R + Sbjct: 181 DFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI 218 >gi|213968920|ref|ZP_03397060.1| recombination protein RecR [Pseudomonas syringae pv. tomato T1] gi|301385358|ref|ZP_07233776.1| recombination protein RecR [Pseudomonas syringae pv. tomato Max13] gi|302061232|ref|ZP_07252773.1| recombination protein RecR [Pseudomonas syringae pv. tomato K40] gi|302133131|ref|ZP_07259121.1| recombination protein RecR [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926219|gb|EEB59774.1| recombination protein RecR [Pseudomonas syringae pv. tomato T1] gi|330879118|gb|EGH13267.1| recombination protein RecR [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967861|gb|EGH68121.1| recombination protein RecR [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015906|gb|EGH95962.1| recombination protein RecR [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 200 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA A+ + V C +C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRLCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCSDLRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERISQQATFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|28870795|ref|NP_793414.1| recombination protein RecR [Pseudomonas syringae pv. tomato str. DC3000] gi|37999576|sp|Q87Z00|RECR_PSESM RecName: Full=Recombination protein recR gi|28854044|gb|AAO57109.1| recombination protein RecR [Pseudomonas syringae pv. tomato str. DC3000] Length = 200 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA A+ + V C +C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRLCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +R+ +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCSDLRRNDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 122 GIPQLMERISQQATFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|238650290|ref|YP_002916142.1| recombination protein RecR [Rickettsia peacockii str. Rustic] gi|259563705|sp|C4K0J3|RECR_RICPU RecName: Full=Recombination protein recR gi|238624388|gb|ACR47094.1| recombination protein RecR [Rickettsia peacockii str. Rustic] Length = 201 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 124/199 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNETNDNDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHV G +LS R Sbjct: 61 ICGNMDTENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVFGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLDDGT+ AI R Sbjct: 181 ELDYLDDGTVSAAINLRQP 199 >gi|319944207|ref|ZP_08018483.1| recombination protein R [Lautropia mirabilis ATCC 51599] gi|319742502|gb|EFV94913.1| recombination protein R [Lautropia mirabilis ATCC 51599] Length = 198 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 114/193 (59%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++ LI L +PG GPRSARR HL+++ L+E +A +V CS C + Sbjct: 4 PAALDELILALRGLPGVGPRSARRLAFHLLQRDRDAARRLSEGLAQALERVRHCSRCNTL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC D+ R+ +++ VVE+ AD +E ++A LY+VL G LSPLD IGP D+ Sbjct: 64 TEHELCDICSDETRNPALLCVVENPADQLVIEHTRAYQGLYYVLMGRLSPLDGIGPSDLQ 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L+ R +RE++ A + T EG+ TAHY+ + L + ++R A G+P+G EL+Y+ Sbjct: 124 FERLLARATDGVVREVVLATNFTQEGEATAHYLSEVLTARGLSVSRPARGVPLGGELEYV 183 Query: 187 DDGTIFEAIRSRT 199 D T+ +A+R R Sbjct: 184 DAATVAQALRDRR 196 >gi|15892532|ref|NP_360246.1| recombination protein RecR [Rickettsia conorii str. Malish 7] gi|20139547|sp|Q92I11|RECR_RICCN RecName: Full=Recombination protein recR gi|15619693|gb|AAL03147.1| recombination protein RecR [Rickettsia conorii str. Malish 7] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 125/199 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNETNDNDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDIRLKSLINNLVEIDKKIVKCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNMDTENMCRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSATSRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTVSAAINLRQP 199 >gi|330829301|ref|YP_004392253.1| Gap repair protein with type I DNA topoisomerase domain [Aeromonas veronii B565] gi|328804437|gb|AEB49636.1| Gap repair protein with type I DNA topoisomerase domain [Aeromonas veronii B565] Length = 200 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 ++ ++K L +PG GP+SA+R L++++ LA+ ++ ++ CS C Sbjct: 3 FSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLAQLLSRALTEIGHCSHCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R+ ++ VVE AD+ A+E++ + Y VL G LSPLD IGPE+ Sbjct: 63 FTENDRCDICANPKREENGLLCVVESPADVAAIEQTGQFSGRYFVLMGHLSPLDGIGPEE 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +G+ L R++ + I ELI A + TIEG TA YI D + V+++R+A+G+P+G EL+ Sbjct: 123 LGLDILERRLKEEHISELILATNPTIEGDATAWYIADMARTAGVEVSRIAHGVPVGGELE 182 Query: 185 YLDDGTIFEAIRSRTVL 201 +D T+ ++ R L Sbjct: 183 LVDGTTLSHSLMGRQRL 199 >gi|169351619|ref|ZP_02868557.1| hypothetical protein CLOSPI_02399 [Clostridium spiroforme DSM 1552] gi|169291841|gb|EDS73974.1| hypothetical protein CLOSPI_02399 [Clostridium spiroforme DSM 1552] Length = 197 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 118/196 (60%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +NL+ R+PG G +SA R +++ ++ + ++ +A+I++ + C CG+ Sbjct: 3 YPRSFQNLVNCFKRLPGIGGKSAERLAYYILSMDKEYVDDFSKTLASIHDNIHYCKKCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D+ RD SVI VVE+ D++A+E+ K N LYHVL G++S +D +D+ Sbjct: 63 ICEDEICDICKDKSRDQSVICVVEESKDVFAMEKVKEYNGLYHVLHGTMSIIDGKTMDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL R+ I+E+I A + T +G+TTA Y+ L ++ +R+A G+P+GS +DY Sbjct: 123 NIASLFNRL-DDSIKEVIIATNPTRDGETTALYLAKLLAKRNINTSRIANGLPIGSNIDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +++ R + Sbjct: 182 ADELTLLKSLEGRKKI 197 >gi|157828483|ref|YP_001494725.1| recombination protein RecR [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933201|ref|YP_001649990.1| recombination protein RecR [Rickettsia rickettsii str. Iowa] gi|166221960|sp|A8GS42|RECR_RICRS RecName: Full=Recombination protein recR gi|189029369|sp|B0BXK8|RECR_RICRO RecName: Full=Recombination protein recR gi|157800964|gb|ABV76217.1| recombination protein RecR [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908288|gb|ABY72584.1| recombination protein [Rickettsia rickettsii str. Iowa] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 125/199 (62%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + +I+ LI + +++PG G RSARR L+L++ K+ L L + I K+ C Sbjct: 1 MNETNYNDIDQLIYLFSKLPGLGIRSARRIALYLLQDKDVRLKSLINNLVEIDKKIVKCE 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 ICGN+DT + C IC + RD S+I +VE VA+LWA+ERS LYHVLG +LS R Sbjct: 61 ICGNMDTENICRICSSEYRDKSIIAIVETVAELWAMERSGNFKGLYHVLGHNLSAASRQN 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P + + L+ R + I+E+I A ++T+EGQTTA++I + LK KI+RLA GIP+G Sbjct: 121 PSILRLPELLTRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLASGIPIGG 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 181 ELDYLDEGTVSAAINLRQP 199 >gi|206603201|gb|EDZ39681.1| Recombination protein RecR [Leptospirillum sp. Group II '5-way CG'] Length = 214 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 118/200 (59%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +LI+ L +PG G ++A R HL+K E+ L+ ++ + + LC C N Sbjct: 15 YPLPFHHLIESLRTLPGIGIKTATRLAFHLLKAPEEEALQLSREISGLREALVLCPQCQN 74 Query: 66 VDTTD----PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 + D C IC D RD ++VVED+ L+++ER+ YHVL G LSPL+ IG Sbjct: 75 IMDRDSRLSCCTICADPARDPGTVMVVEDIQTLYSIERTGEFRGRYHVLLGRLSPLEGIG 134 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 PE + ++ L++R +I E+I A S T+EG++TA Y+ K + VK++R+A+GIP+G Sbjct: 135 PEALRVRELLDRTGTGEIHEMILATSPTVEGESTALYLARLFKPLGVKVSRIAFGIPVGL 194 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+++DD T+ ++ +R + Sbjct: 195 ELEFVDDITLIRSVEARRPM 214 >gi|227894600|ref|ZP_04012405.1| recombinational DNA repair protein [Lactobacillus ultunensis DSM 16047] gi|227863591|gb|EEJ71012.1| recombinational DNA repair protein [Lactobacillus ultunensis DSM 16047] Length = 185 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 115/184 (62%), Gaps = 1/184 (0%) Query: 19 RIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQ 78 ++PG G ++A R + + ++ + ++A+ + + C ICGN+ D C IC + Sbjct: 2 KLPGIGEKTATRLAFYTMDMPQEDVEDFSKALIQVKKDIHQCPICGNITEKDVCDICSNP 61 Query: 79 QRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIE-VK 137 RD + I+VVE DL A E N LYHVL G LSP+D IGPE+I I+SLI R++ Sbjct: 62 NRDQTTIMVVEQPKDLMAFEEMGEYNGLYHVLHGVLSPMDGIGPEEINIKSLITRLQKHD 121 Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197 +++E+I A+++T EG++TA YI +K +K+TRLA G+ +GS+++Y + T+ A++ Sbjct: 122 EVKEVILALNSTPEGESTAMYISKLIKPAGIKVTRLAAGLSVGSDIEYANSITLKRAVQG 181 Query: 198 RTVL 201 RT L Sbjct: 182 RTAL 185 >gi|56707920|ref|YP_169816.1| recombination protein RecR [Francisella tularensis subsp. tularensis SCHU S4] gi|110670391|ref|YP_666948.1| recombination protein RecR [Francisella tularensis subsp. tularensis FSC198] gi|224457002|ref|ZP_03665475.1| recombination protein RecR [Francisella tularensis subsp. tularensis MA00-2987] gi|254370411|ref|ZP_04986416.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874729|ref|ZP_05247439.1| recombination protein recR [Francisella tularensis subsp. tularensis MA00-2987] gi|73621485|sp|Q5NGM6|RECR_FRATT RecName: Full=Recombination protein recR gi|122970980|sp|Q14I28|RECR_FRAT1 RecName: Full=Recombination protein recR gi|56604412|emb|CAG45442.1| Recombination protein recR [Francisella tularensis subsp. tularensis SCHU S4] gi|110320724|emb|CAL08825.1| Recombination protein recR [Francisella tularensis subsp. tularensis FSC198] gi|151568654|gb|EDN34308.1| hypothetical protein FTBG_00175 [Francisella tularensis subsp. tularensis FSC033] gi|254840728|gb|EET19164.1| recombination protein recR [Francisella tularensis subsp. tularensis MA00-2987] gi|282159105|gb|ADA78496.1| Recombination protein recR [Francisella tularensis subsp. tularensis NE061598] Length = 200 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200 >gi|325972847|ref|YP_004249038.1| recombination protein recR [Spirochaeta sp. Buddy] gi|324028085|gb|ADY14844.1| Recombination protein recR [Spirochaeta sp. Buddy] Length = 196 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 87/192 (45%), Positives = 121/192 (63%), Gaps = 1/192 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +ENLI+ L+R+PG GP+SA R HL+K + LA+A+A I +K+ CSICG+ Sbjct: 3 ALENLIQTLSRLPGIGPKSASRLAYHLIKTDKLYNSTLADAIATIQDKIFPCSICGSFTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 DPC +C D RD + + VVE D+ L+ S A N LYHVLGG++SPLD IGPE + Sbjct: 63 YDPCPMCGDTSRDRTQLCVVEQPQDVLTLQSSGAYNGLYHVLGGAISPLDGIGPEHLSFS 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187 L++RI+ ELI A + T EG TTA Y+ LK ++ ITRLA G+P+G +L+Y D Sbjct: 123 KLVKRIDEGGFTELIIATNPTEEGDTTALYLRHILKNHEELSITRLASGLPIGGDLEYAD 182 Query: 188 DGTIFEAIRSRT 199 T+ ++R R Sbjct: 183 RITLARSLRGRV 194 >gi|145294361|ref|YP_001137182.1| recombination protein RecR [Corynebacterium glutamicum R] gi|172044393|sp|A4QAN3|RECR_CORGB RecName: Full=Recombination protein recR gi|140844281|dbj|BAF53280.1| hypothetical protein [Corynebacterium glutamicum R] Length = 218 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI L+R+PG GP+SA+R HL+ + L EA+ + + V C IC Sbjct: 1 MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D RD I VVE+ D+ +ER+ + YHVLGG+L PL IGP + Sbjct: 61 NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I +L++RI +RE+I A EG+ TA Y+ LK Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+ ++RLA G+P+G +L+++D+ T+ A+ R + Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI 218 >gi|99036083|ref|ZP_01315117.1| hypothetical protein Wendoof_01000036 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 197 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 86/191 (45%), Positives = 135/191 (70%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I+NL+ +++P GP S+RR +HL++ KE+++ PLA + + + + C +CGN+DT Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 PC+IC + +RD ++ VVE++ DLWA E+ + LYHVLGG LS ++ GP+++ + + Sbjct: 65 SPCSICTNPKRDTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGTGPKELNLDT 124 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 +++R+ KI E+I AI+ T+EGQ TA YI++ LK +DVKI+RLA GIPMG E+DYLD+G Sbjct: 125 ILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDEG 184 Query: 190 TIFEAIRSRTV 200 T+ A+ SR Sbjct: 185 TLRIALTSRQE 195 >gi|124026189|ref|YP_001015305.1| RecR protein [Prochlorococcus marinus str. NATL1A] gi|123961257|gb|ABM76040.1| RecR protein [Prochlorococcus marinus str. NATL1A] Length = 182 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 122/182 (67%), Gaps = 1/182 (0%) Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79 +PG GPR+A+R LHL+++ E + +EA+ N ++V C C ++ + C IC+++Q Sbjct: 1 MPGIGPRTAQRLALHLLRQPEDKIRLFSEALLNAKSQVGQCKTCFHLTAGEQCEICLNKQ 60 Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139 R+ +I VV + DL ALER++ LYHV+GG +SP+D IGPE + I SLI+R++ I Sbjct: 61 RNQELICVVSESRDLLALERTREYKGLYHVIGGLISPMDGIGPEMLEISSLIKRVDKANI 120 Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 +E+I A++ +IEG TT+ Y+ LK K+TR+AYG+P+GSEL+Y D+ T+ A+ R Sbjct: 121 KEVILALTPSIEGDTTSLYVGRLLKPF-TKVTRIAYGLPVGSELEYADEVTLSRALEGRR 179 Query: 200 VL 201 L Sbjct: 180 DL 181 >gi|261367394|ref|ZP_05980277.1| recombination protein RecR [Subdoligranulum variabile DSM 15176] gi|282570160|gb|EFB75695.1| recombination protein RecR [Subdoligranulum variabile DSM 15176] Length = 198 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + + +ENL+ AR PG G + A R ++ + LA A+ + + C Sbjct: 1 MPQNV--EPLENLVDQFARFPGIGRKGATRMAYEVMSMSNEQAMELARAIEHAKKDLHRC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 IC + + C IC +RD SVI VVE D+ ++ER+ N LYHVL G +SP+D I Sbjct: 59 RICQDYTAGEVCKICSSPKRDRSVICVVESPRDIKSIERTHEYNGLYHVLHGLISPMDGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 G + + ++ L+ R+ + ++E+I A S T+EG+ TA Y+ +K + ++ TRLAYG+P+G Sbjct: 119 GADQLCVKELLARL-NETVKEVIMATSPTVEGEATAMYLAKLIKPLGIRTTRLAYGLPVG 177 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S L+Y D+ T++ A++ R L Sbjct: 178 SSLEYADETTLYRAMQGRGEL 198 >gi|83645395|ref|YP_433830.1| recombination protein RecR [Hahella chejuensis KCTC 2396] gi|123533423|sp|Q2SIW9|RECR_HAHCH RecName: Full=Recombination protein recR gi|83633438|gb|ABC29405.1| recombination protein RecR [Hahella chejuensis KCTC 2396] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +T I+ L++ L +PG G ++A R L+L+++ + LA A+++ +V C Sbjct: 1 MSSSLT-PAIDQLVRCLRYLPGVGAKTATRMALNLLERDQGRAADLAIAISDALTRVKRC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N + C+IC +RD V+ VVE D+ A+E++ + Y VL G LSP+D I Sbjct: 60 SRCQNFCEAELCSICESPKRDDRVLCVVESPTDVLAIEQTSDYSGRYFVLMGHLSPIDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPEDIG+ L + ++ + ELI A + T+EG+ TAH+I K +++ ++R+A+GIP+G Sbjct: 120 GPEDIGVDKLKQLLQESAVSELILATNPTVEGEATAHFIAHIAKDLNIPVSRIAHGIPLG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL +D GT+ A++ R Sbjct: 180 GELGMIDSGTLSHALQGRKP 199 >gi|304320340|ref|YP_003853983.1| recombination protein RecR [Parvularcula bermudensis HTCC2503] gi|303299242|gb|ADM08841.1| recombination protein RecR [Parvularcula bermudensis HTCC2503] Length = 202 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 102/199 (51%), Positives = 144/199 (72%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M G EIE L+ I++R+PGFGPRSARR LHL++++E ++ PLAEA+A V C Sbjct: 1 MSTLPVGPEIEQLLTIISRLPGFGPRSARRIALHLLRRREGVMVPLAEALATAAATVAPC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN D+ PC +C D++RD SV+ VVEDV D+WALERS A YH+LGG +SPLD I Sbjct: 61 EICGNWDSQSPCRLCEDEERDGSVLCVVEDVGDVWALERSGAFKGRYHILGGLISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+D+ L +R +RE+I A+SAT++GQTTA Y+ D+L+G+ + +TRL++G+P+G Sbjct: 121 GPDDLNFGPLSQRASAGTVREVILALSATVDGQTTAGYVADRLEGLGLTVTRLSHGVPIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 EL +LD+GT+ A++SR Sbjct: 181 GELGHLDEGTLAAALQSRR 199 >gi|24217032|ref|NP_714513.1| recombinational DNA repair protein [Leptospira interrogans serovar Lai str. 56601] gi|45659291|ref|YP_003377.1| recombination protein RecR [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|56749625|sp|Q72LS5|RECR_LEPIC RecName: Full=Recombination protein recR gi|56749658|sp|Q8EY84|RECR_LEPIN RecName: Full=Recombination protein recR gi|24198441|gb|AAN51531.1| recombinational DNA repair protein [Leptospira interrogans serovar Lai str. 56601] gi|45602537|gb|AAS72014.1| RecR [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 123/201 (61%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + ++ +I+ L+ +PG G +SA R + HL++ ++ L + + NK+ C Sbjct: 1 MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG+ T+ C IC+ ++RD+ VVE D++ +E ++ YHVL G +SPL+ I Sbjct: 61 KRCGSYAETEICEICVSEKRDSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I+ L+ERIE ++++E++ A + T+EG TA Y+ ++LK I V +TR+AYGI +G Sbjct: 121 GPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ++ D T+ AIRSR L Sbjct: 181 GSIELADQYTLGRAIRSRLQL 201 >gi|269120331|ref|YP_003308508.1| recombination protein RecR [Sebaldella termitidis ATCC 33386] gi|268614209|gb|ACZ08577.1| recombination protein RecR [Sebaldella termitidis ATCC 33386] Length = 194 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 120/194 (61%), Gaps = 1/194 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K ++N+I A++PG G +SA R H+++ +++ L + K+ C ICGN+ Sbjct: 2 KSLDNIIDEFAKLPGIGRKSAMRIAFHVLEMEDEELLNFITILKEAKEKIKKCEICGNLT 61 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC D++RD+S+I +V+D D+ A E+SK N LYHVLGG + PL+ IG +D+ I Sbjct: 62 ENDICEICSDEERDSSIICIVKDSRDIIAFEKSKTYNGLYHVLGGIIDPLNGIGVDDLDI 121 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L +R+ ++E+I A+ ++EG+TT+ Y+ +K ++ ++R+A GIPMG +++ D Sbjct: 122 DKLTKRL-TGNVKEVILALDPSLEGETTSLYLSKIIKEKEIIVSRIASGIPMGGNIEFSD 180 Query: 188 DGTIFEAIRSRTVL 201 T+ ++ R + Sbjct: 181 IATLSRSLEGRKEI 194 >gi|270158085|ref|ZP_06186742.1| recombination protein RecR [Legionella longbeachae D-4968] gi|289163649|ref|YP_003453787.1| Recombination and repair protein recR [Legionella longbeachae NSW150] gi|269990110|gb|EEZ96364.1| recombination protein RecR [Legionella longbeachae D-4968] gi|288856822|emb|CBJ10633.1| Recombination and repair protein recR [Legionella longbeachae NSW150] Length = 197 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 78/192 (40%), Positives = 119/192 (61%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 + L++ L +PG GP+SA+R HL++ + Q LA + N++ C C N Sbjct: 4 LTRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMNQIQHCERCANYTEH 63 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 CA+C + RD+S++ VVE AD+ A+E+S A Y VL G +SPLD +GP+DIG+ Sbjct: 64 KLCALCQNSDRDSSLLCVVESPADVSAIEQSNAFQGKYFVLMGKISPLDGLGPDDIGLPR 123 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L I + I+E+I A+S ++EGQTT H+I L+ V +T+LA+GIP G EL++LD Sbjct: 124 LKRLIIQENIKEVILALSPSVEGQTTIHFIHQLLRDQPVNMTQLAHGIPSGGELEFLDGN 183 Query: 190 TIFEAIRSRTVL 201 TI A+R+R ++ Sbjct: 184 TIGNALRNRAII 195 >gi|85857925|ref|YP_460127.1| recombination protein [Syntrophus aciditrophicus SB] gi|123517947|sp|Q2LYF5|RECR_SYNAS RecName: Full=Recombination protein recR gi|85721016|gb|ABC75959.1| recombination protein [Syntrophus aciditrophicus SB] Length = 203 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 116/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I++LI L ++PG G ++A R +H+++ E LA+++ + +K+ C +C N Sbjct: 4 YPLPIKHLISELGKLPGIGEKTATRLAMHILRAPEGDARALADSILEVRDKIRFCRVCYN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C +C D RD+S I VVED L A+E S + + YHVL G LSPLD IGPE + Sbjct: 64 FSEAELCTVCRDSARDSSQICVVEDPDALMAIEDSGSYSGTYHVLHGVLSPLDGIGPEQL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L+ERI +RE+I A + + G +TA I + + V +TR+A G+PMGS+L Y Sbjct: 124 KLRELVERIRESGVREVILATNPNVSGDSTALLISRMIGPLAVTVTRIAQGVPMGSDLRY 183 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ +++ R + Sbjct: 184 MDRMTLSKSLEFRRGM 199 >gi|134301666|ref|YP_001121634.1| recombination protein RecR [Francisella tularensis subsp. tularensis WY96-3418] gi|254369564|ref|ZP_04985575.1| recombination protein recR [Francisella tularensis subsp. holarctica FSC022] gi|254374597|ref|ZP_04990078.1| hypothetical protein FTDG_00771 [Francisella novicida GA99-3548] gi|166221941|sp|A4IX62|RECR_FRATW RecName: Full=Recombination protein recR gi|134049443|gb|ABO46514.1| recombination protein RecR [Francisella tularensis subsp. tularensis WY96-3418] gi|151572316|gb|EDN37970.1| hypothetical protein FTDG_00771 [Francisella novicida GA99-3548] gi|157122518|gb|EDO66653.1| recombination protein recR [Francisella tularensis subsp. holarctica FSC022] Length = 200 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200 >gi|118497787|ref|YP_898837.1| RecFOR complex, RecR component [Francisella tularensis subsp. novicida U112] gi|194323759|ref|ZP_03057535.1| recombination protein RecR [Francisella tularensis subsp. novicida FTE] gi|208779850|ref|ZP_03247194.1| recombination protein RecR [Francisella novicida FTG] gi|254373144|ref|ZP_04988633.1| recombination protein recR [Francisella tularensis subsp. novicida GA99-3549] gi|166221940|sp|A0Q768|RECR_FRATN RecName: Full=Recombination protein recR gi|118423693|gb|ABK90083.1| RecFOR complex, RecR component [Francisella novicida U112] gi|151570871|gb|EDN36525.1| recombination protein recR [Francisella novicida GA99-3549] gi|194322123|gb|EDX19605.1| recombination protein RecR [Francisella tularensis subsp. novicida FTE] gi|208744305|gb|EDZ90605.1| recombination protein RecR [Francisella novicida FTG] Length = 200 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETARAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD + Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLDILQRIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200 >gi|113475124|ref|YP_721185.1| recombination protein RecR [Trichodesmium erythraeum IMS101] gi|110166172|gb|ABG50712.1| DNA replication and repair protein RecR [Trichodesmium erythraeum IMS101] Length = 182 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 77/182 (42%), Positives = 117/182 (64%), Gaps = 1/182 (0%) Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79 +PG GP++A+R L+++K+ E + LAEA+ + K+ LC C ++ C IC + Q Sbjct: 1 MPGVGPKTAQRLALYIIKRPEAEIQALAEALVDARKKIGLCQKCFHLSAEPICEICRNPQ 60 Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139 RD VI VV D DL ALE+++ YHVLGG +SP+D IGPE + IQ L+ R+ + I Sbjct: 61 RDKEVICVVCDSRDLIALEKTREYKGQYHVLGGVISPMDGIGPEQLSIQPLVRRVSQENI 120 Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 +E+I AIS ++EG+TT Y+ L+ K+TR+A+G+PMG +L+Y D+ T+ A+ R Sbjct: 121 QEVIIAISPSVEGETTTLYVGQLLRPF-TKVTRIAFGLPMGGDLEYADELTLARALEGRQ 179 Query: 200 VL 201 L Sbjct: 180 EL 181 >gi|89900252|ref|YP_522723.1| recombination protein RecR [Rhodoferax ferrireducens T118] gi|122479542|sp|Q21YG1|RECR_RHOFD RecName: Full=Recombination protein recR gi|89344989|gb|ABD69192.1| recombination protein RecR [Rhodoferax ferrireducens T118] Length = 196 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 117/191 (61%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ LI+ L R+PG G +SA R HL++ L+ A+ +++ C C Sbjct: 6 SLDVLIQALRRLPGVGVKSASRMAFHLLQHDRPGALALSRALQVAADQMRHCERCHTFTQ 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D CA C+D +RDAS + VVE AD ALER+ A + LY VL G LSPLD IGP+DIG++ Sbjct: 66 ADICATCLDPRRDASKLCVVETPADQSALERTGAYHGLYFVLMGKLSPLDGIGPKDIGLK 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L +R ++E+I A + T EG+ TAH I + LK +++TRLA G+P+GSEL+Y+D Sbjct: 126 GLFDRACDGTVQEVILATNFTAEGEATAHVISEGLKSRGLRLTRLARGVPVGSELEYVDL 185 Query: 189 GTIFEAIRSRT 199 GTI A+ R Sbjct: 186 GTIAHALLDRR 196 >gi|330837780|ref|YP_004412421.1| DNA replication and repair protein RecR [Spirochaeta coccoides DSM 17374] gi|329749683|gb|AEC03039.1| DNA replication and repair protein RecR [Spirochaeta coccoides DSM 17374] Length = 196 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 1/193 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++NLI+ L+R+PG GP+SA R HL+K Q LA+++ I + V C +CG+ Sbjct: 3 TLDNLIQALSRLPGIGPKSAARIGYHLIKTNPQYNKELAKSIGTIQDVVFPCPVCGSYTE 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC C D RD ++ VVE D+ + S + N LYHVLGG++SPLD IGPED+ Sbjct: 63 ISPCRFCSDSSRDRELLCVVEQPQDVVTISTSGSYNGLYHVLGGAISPLDGIGPEDLSFD 122 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLD 187 SL+ RI +E+I A + T EG TTA YI +K D+ +TRLA G+P+G +L+Y D Sbjct: 123 SLMRRISEGSFQEVIIATNPTEEGDTTAMYIRHLMKDFPDIILTRLASGLPIGGDLEYAD 182 Query: 188 DGTIFEAIRSRTV 200 T+ ++R R Sbjct: 183 RLTLARSLRGRIK 195 >gi|320354018|ref|YP_004195357.1| recombination protein RecR [Desulfobulbus propionicus DSM 2032] gi|320122520|gb|ADW18066.1| recombination protein RecR [Desulfobulbus propionicus DSM 2032] Length = 203 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 119/198 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 +I +E LI L R+PG G ++A R L+++++ LA + +++ + LC Sbjct: 1 MQIIPPALERLIADLTRLPGIGRKTATRLALYILRRPAAEGRNLAHDLMVLHDTIHLCHQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C TDPCAIC + RD+ ++ VVE+ D A+E++ YH+L G ++P+D IGP Sbjct: 61 CFTFSETDPCAICGNPGRDSRLVCVVEEPGDQIAIEKTGVFRGTYHILHGVIAPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 +++ I+ L +R+ ++ E++ A S+T+ G+ TA Y+ + L+ V+++RLA GIPMG + Sbjct: 121 DELKIRELRQRVASGQVDEVLIATSSTVPGEATASYLAEMLQDTKVRLSRLACGIPMGMD 180 Query: 183 LDYLDDGTIFEAIRSRTV 200 + Y D+ T+ A+ SR Sbjct: 181 IKYADEHTLARAVESRQS 198 >gi|238795500|ref|ZP_04639015.1| hypothetical protein ymoll0001_10900 [Yersinia mollaretii ATCC 43969] gi|238720619|gb|EEQ12420.1| hypothetical protein ymoll0001_10900 [Yersinia mollaretii ATCC 43969] Length = 191 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R L+++ LA+++ +++ C+ C D C Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQDRCT 60 Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L + Sbjct: 61 ICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R+E + I E+I A + T+EG TA+YI V +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLESETITEVILATNPTVEGDATANYIGQMCGQYGVLASRIAHGVPVGGELEMVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R + Sbjct: 181 HSLAGRNPI 189 >gi|189485280|ref|YP_001956221.1| recombination protein RecR [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226739009|sp|B1GZS8|RECR_UNCTG RecName: Full=Recombination protein recR gi|170287239|dbj|BAG13760.1| recombination protein RecR [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 198 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 120/195 (61%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + +E ++ I+ ++PG G + A R + H++K + + L +++ N + CSIC N+ Sbjct: 4 PRPVEKMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSICCNL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 DPC IC D R+ +++ VVE DL A+ + + LY VLGG+LSPLD +GP+DI Sbjct: 64 SEHDPCPICSDVTREKNIVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGPDDIR 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I LI+R++ I E+I A A +G+ TA Y+ D +K + +K+TRL YG+P+G +++Y Sbjct: 124 IDKLIKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGDIEYA 183 Query: 187 DDGTIFEAIRSRTVL 201 D+ TI AI R + Sbjct: 184 DEITISRAIAGRKEM 198 >gi|38232884|ref|NP_938651.1| recombination protein RecR [Corynebacterium diphtheriae NCTC 13129] gi|73621480|sp|Q6NJY0|RECR_CORDI RecName: Full=Recombination protein recR gi|38199142|emb|CAE48766.1| recombination protein [Corynebacterium diphtheriae] Length = 218 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 116/218 (53%), Gaps = 21/218 (9%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI +R+PG GP+SA+R HL+ + + L +A+ I + V C IC Sbjct: 1 MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICC 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D RD S I VVE+ D+ +ER+ YHVLGGSL PL IGP + Sbjct: 61 NISREEVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRE 120 Query: 125 IGIQSLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLK 164 + I L++RI ++RE+I A EG+ TA Y+ L+ Sbjct: 121 LNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVILATDPNTEGEATASYLARLLR 180 Query: 165 GI-DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 D+ ++RLA G+P+G +L+++D+ T+ A+ R L Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL 218 >gi|167719250|ref|ZP_02402486.1| recombination protein RecR [Burkholderia pseudomallei DM98] Length = 189 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + L++ L +PG GP+SA+R HL++ + L ++ + C Sbjct: 1 MSIK-PPSALSELVEALRALPGVGPKSAQRIAYHLMQHDREGAERLGRSLLFATEHLRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C +C D +RD +++ VVE AD LE++ LY VL G LSPLD I Sbjct: 60 EKCNTFTEAQVCEVCSDPERDPALLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGI 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP++I L+ R ++E++ A + T EG+ TAHY+ LK + +TRLA G+P+G Sbjct: 120 GPKEIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVG 179 Query: 181 SELDYLDDGT 190 EL+Y+D GT Sbjct: 180 GELEYVDAGT 189 >gi|237755840|ref|ZP_04584438.1| recombination protein RecR [Sulfurihydrogenibium yellowstonense SS-5] gi|237692005|gb|EEP61015.1| recombination protein RecR [Sulfurihydrogenibium yellowstonense SS-5] Length = 200 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 127/199 (63%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I+ +I ++R+PG+G ++A+R ++L+K + L +A + +KV LC Sbjct: 1 MNLVPDSIQQVISEISRLPGYGEKTAQRLAVNLLKMPKGEAVDLVRHLALMLDKVHLCRE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + C +C D+ RD SVI VVE+ D + +E + N LYHVLGG LSPL+ IGP Sbjct: 61 CGIFTEKEICDVCSDESRDRSVICVVEESFDAFMIENTDKYNGLYHVLGGRLSPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I+SLI+RI+ ++E+IFA + T+EG+ TA+YI + +K + I+RLAYG+P G Sbjct: 121 EKLNIKSLIDRIKKLNVKEIIFATNPTVEGEATANYIHNLIKNYPITISRLAYGLPFGGI 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ DD T+ +A+ ++ +L Sbjct: 181 LENADDFTLAKALENKQIL 199 >gi|327405347|ref|YP_004346185.1| DNA replication and repair protein RecR [Fluviicola taffensis DSM 16823] gi|327320855|gb|AEA45347.1| DNA replication and repair protein RecR [Fluviicola taffensis DSM 16823] Length = 201 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 119/196 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I K +E ++ + +PG G R+A R L+L+K+ + L + + + V CS Sbjct: 1 MNIPSKYVEEAVEQFSSLPGIGKRTALRLVLNLLKRNPEELERFGDVLQQLKTHVQSCSS 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ T C+IC +++R+ +I VVED+ D+ A+E + +YHVLGG +SP+D IGP Sbjct: 61 CGNISDTAICSICANEKRNHRLICVVEDIRDVMAIESTGTYLGIYHVLGGIISPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 D+ IQ L+++ + E+I A+S T+EG TT ++ K+ +V+IT L+ GI +GSE Sbjct: 121 NDLFIQPLVDKCSQGSVDEIILALSPTMEGDTTNFFLYKKIHATNVQITTLSRGIAVGSE 180 Query: 183 LDYLDDGTIFEAIRSR 198 + Y D+ T+ +I+ R Sbjct: 181 IQYADEITLSRSIQQR 196 >gi|254994847|ref|ZP_05277037.1| recombination protein RecR [Anaplasma marginale str. Mississippi] Length = 227 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 89/193 (46%), Positives = 131/193 (67%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT Sbjct: 2 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ + Sbjct: 62 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+ Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR V+ Sbjct: 182 GTLRAALSSRYVI 194 >gi|241668771|ref|ZP_04756349.1| recombination protein RecR [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877302|ref|ZP_05250012.1| recombination protein recR [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843323|gb|EET21737.1| recombination protein recR [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 201 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +I +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MNNQIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C ++ D C IC Q RD S + ++E + DL A+E + Y VL G +SPLD I Sbjct: 61 KYCQSLTEKDVCDICSSQNRDESKLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I ++I E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPNELKLDILEQIIINREISEIILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLIHAFNARTNI 200 >gi|160945465|ref|ZP_02092691.1| hypothetical protein FAEPRAM212_02990 [Faecalibacterium prausnitzii M21/2] gi|158443196|gb|EDP20201.1| hypothetical protein FAEPRAM212_02990 [Faecalibacterium prausnitzii M21/2] Length = 199 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 114/199 (57%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 T +E LI+ + G G + A R ++ ++ LA+A+ + ++ C I Sbjct: 1 MDYTAAPLEKLIEEFGKFQGVGRKGATRMAYQVLSMSDKDAAALADAIRGAHTRLHRCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N D C +C +RD SVI VVE D+ A ER++ N LYHVL G L PL +G Sbjct: 61 CQNFTDADLCPVCASAKRDTSVICVVEKPRDVQAFERTREYNGLYHVLHGLLDPLAGVGV 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++ L+ R++ ++E+I A++ T+EG+ TA Y+ +K + +++TRLA G+P+G+ Sbjct: 121 EQLTVKELLARLKDDTVKEVIMAMNPTVEGEATAMYLAKLIKPLGIRVTRLASGLPVGAS 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T++ A+ R L Sbjct: 181 LEYADETTLYRALSGRGEL 199 >gi|238751047|ref|ZP_04612543.1| hypothetical protein yrohd0001_1800 [Yersinia rohdei ATCC 43380] gi|238710737|gb|EEQ02959.1| hypothetical protein yrohd0001_1800 [Yersinia rohdei ATCC 43380] Length = 191 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R L+++ LA+++ +++ C+ C D C Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQSLTRAMSEIGHCADCRTFTEQDRCT 60 Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC + +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L + Sbjct: 61 ICSNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R+E + I E+I A + T+EG TA+YI V TR+A+G+P+G EL+ +D T+ Sbjct: 121 RLETETISEVILATNPTVEGDATANYIGQMCGQYGVLATRIAHGVPVGGELEMVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R + Sbjct: 181 HSLAGRNPI 189 >gi|295105374|emb|CBL02918.1| recombination protein RecR [Faecalibacterium prausnitzii SL3/3] Length = 199 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 114/199 (57%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 T +E LI+ + G G + A R ++ ++ LA+A+ + ++ C I Sbjct: 1 MDYTAAPLEKLIEEFGKFQGVGRKGATRMAYQVLSMSDKDAAALADAIRGAHTRLHRCRI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N + C +C +RD SVI VVE D+ A ER++ N LYHVL G L PL +G Sbjct: 61 CQNFTDAELCPVCASAKRDTSVICVVEKPRDVQAFERTREYNGLYHVLHGLLDPLAGVGA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++ L+ R++ ++E+I A++ T+EG+ TA Y+ +K + +++TRLA G+P+G+ Sbjct: 121 EQLTVKELLARLKDDTVKEVIMAMNPTVEGEATAMYLAKLIKPLGIRVTRLASGLPVGAS 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+Y D+ T++ A+ R L Sbjct: 181 LEYADETTLYRALSGRGEL 199 >gi|308270886|emb|CBX27496.1| Recombination protein recR [uncultured Desulfobacterium sp.] Length = 198 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 123/190 (64%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NLIK L ++PG G ++A R +H+++ ++ LA + ++ +KV +CS C + T+ Sbjct: 9 NLIKNLTKLPGVGEKTAERYAMHILRSSQKEAEQLAADILDMKHKVRICSKCFALSETEV 68 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC + R+ S++ V E AD+ A+E+S + N LYH+L G LSP++ IGP+DI I+ LI Sbjct: 69 CHICSNPSRNNSLLCVTEQPADMVAIEKSGSFNGLYHILSGVLSPINGIGPDDIKIKELI 128 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +RIE KI E++ A S ++EG+ TA YI L V ITR+A G+P+G +L Y+D T+ Sbjct: 129 KRIEEGKITEVVVATSTSMEGEATASYIAQCLSKYTVNITRIASGVPIGGDLKYVDQVTL 188 Query: 192 FEAIRSRTVL 201 +A+ +R + Sbjct: 189 KKAMETRHAI 198 >gi|227502439|ref|ZP_03932488.1| recombination protein RecR [Corynebacterium accolens ATCC 49725] gi|227076808|gb|EEI14771.1| recombination protein RecR [Corynebacterium accolens ATCC 49725] Length = 219 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 21/214 (9%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+ Sbjct: 6 PLQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGGVRDGVTFCRICCNISR 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP+D+ I Sbjct: 66 EDVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPKDLNIS 125 Query: 129 SLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-D 167 +L++R+ + I E+I A EG+ TA Y++ L+ D Sbjct: 126 TLLQRLGGVLPDRELADSTPEAPLYDDTPTIHEVILATDPNTEGEATAAYLVRLLRDFPD 185 Query: 168 VKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +KITRLA G+P+G +L+++D+ T+ A+ R + Sbjct: 186 LKITRLASGMPLGGDLEFVDELTLSRALSGRLTI 219 >gi|226226520|ref|YP_002760626.1| recombination protein RecR [Gemmatimonas aurantiaca T-27] gi|226089711|dbj|BAH38156.1| recombination protein RecR [Gemmatimonas aurantiaca T-27] Length = 199 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 123/196 (62%), Gaps = 4/196 (2%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I+ L LAR+PG G ++A R T HL+++ LA+A+ + +V C C N+ + Sbjct: 4 IDELTNELARLPGIGRKTALRLTYHLLRQPASQCRNLADALVALTERVRSCERCHNLTES 63 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 C +C D +RDA+ + VVE +D+ ++ER+ LYHVLGG LSPLD +GP+D+ + Sbjct: 64 TLCHLCADPRRDAATLCVVEQASDIASIERAGEFRGLYHVLGGRLSPLDGVGPDDLHVAD 123 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG----IDVKITRLAYGIPMGSELDY 185 L+ R+E + +RE+I A + ++EG+ TA Y+ +L G +++TR+A G+P+G +L+Y Sbjct: 124 LLARLEAEGVREVILATNPSLEGEATALYVQRQLAGSASSHAIRVTRIARGLPVGGDLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D TI +AI +R + Sbjct: 184 ADGVTIAQAIAARREM 199 >gi|54113491|gb|AAV29379.1| NT02FT0742 [synthetic construct] Length = 200 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 VYCQALTEDDVCNICSNTNRDNTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ AI +RT + Sbjct: 180 GELEYLDQQTLLHAINARTNI 200 >gi|89256705|ref|YP_514067.1| recombination protein RecR [Francisella tularensis subsp. holarctica LVS] gi|115315113|ref|YP_763836.1| recombination protein RecR [Francisella tularensis subsp. holarctica OSU18] gi|156502866|ref|YP_001428931.1| recombination protein RecR [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010458|ref|ZP_02275389.1| recombination protein RecR [Francisella tularensis subsp. holarctica FSC200] gi|254368012|ref|ZP_04984032.1| recombination protein recR [Francisella tularensis subsp. holarctica 257] gi|290954137|ref|ZP_06558758.1| recombination protein RecR [Francisella tularensis subsp. holarctica URFT1] gi|295312455|ref|ZP_06803227.1| recombination protein RecR [Francisella tularensis subsp. holarctica URFT1] gi|122324885|sp|Q0BL35|RECR_FRATO RecName: Full=Recombination protein recR gi|122500482|sp|Q2A2I5|RECR_FRATH RecName: Full=Recombination protein recR gi|166221939|sp|A7NDC2|RECR_FRATF RecName: Full=Recombination protein recR gi|89144536|emb|CAJ79851.1| Recombination protein recR [Francisella tularensis subsp. holarctica LVS] gi|115130012|gb|ABI83199.1| recombination protein RecR [Francisella tularensis subsp. holarctica OSU18] gi|134253822|gb|EBA52916.1| recombination protein recR [Francisella tularensis subsp. holarctica 257] gi|156253469|gb|ABU61975.1| recombination protein RecR [Francisella tularensis subsp. holarctica FTNF002-00] Length = 200 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNTRTNI 200 >gi|306835000|ref|ZP_07468049.1| recombination protein R [Corynebacterium accolens ATCC 49726] gi|304569120|gb|EFM44636.1| recombination protein R [Corynebacterium accolens ATCC 49726] Length = 219 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 122/214 (57%), Gaps = 21/214 (9%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +++LI +R+PG GP+SA+R H++ + + + L A+ + + V C IC N+ Sbjct: 6 PLQDLIDEFSRLPGIGPKSAQRIAFHVLHMEPEDIERLQNALGGVRDGVTFCRICCNISR 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C ICI+ QRDAS I VVE+ D+ +ER+ YHVLGG+L PL +GP+D+ I Sbjct: 66 EDVCRICINSQRDASTICVVEEPKDIQVIERTGEYEGRYHVLGGALDPLANVGPKDLNIS 125 Query: 129 SLIERI--------------------EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-D 167 +L++R+ + IRE+I A EG+ TA Y++ L+ D Sbjct: 126 TLLQRLGGVLPDRELADSTPEAPLYDDTPTIREVILATDPNTEGEATAAYLVRLLRDFPD 185 Query: 168 VKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +KITRLA G+P+G +L+++D+ T+ A+ R + Sbjct: 186 LKITRLASGMPLGGDLEFVDELTLSRALSGRLTI 219 >gi|124516359|gb|EAY57867.1| Recombination protein RecR [Leptospirillum rubarum] Length = 214 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 117/200 (58%), Gaps = 4/200 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 +LI+ L +PG G ++A R HL+K E L+ ++ + + LC C N Sbjct: 15 YPLPFHHLIESLRTLPGIGIKTATRLAFHLLKAPEAEALQLSREISGLREALVLCPQCQN 74 Query: 66 VDTTD----PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 + D C IC D RD ++VVED+ L+++ER+ YHVL G LSPL+ IG Sbjct: 75 IMDRDSRLSCCTICSDPARDPGTVMVVEDIQTLYSIERTGEFRGRYHVLLGRLSPLEGIG 134 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 PE + ++ L++R +I E+I A S T+EG++TA Y+ K + VK++R+A+GIP+G Sbjct: 135 PEALRVRELLDRTGTGEIHEMILATSPTVEGESTALYLARLFKPLGVKVSRIAFGIPVGL 194 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+++DD T+ ++ +R + Sbjct: 195 ELEFVDDITLIRSVEARRPM 214 >gi|332184290|gb|AEE26544.1| Recombination protein RecR [Francisella cf. novicida 3523] Length = 200 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + V C Sbjct: 1 MTSKIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANVRKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 AYCQALTEDDVCNICSNNNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I ++I E+I AIS T+EG+TTAH+I + D KI+R+ +G+P G Sbjct: 121 GPSELKLDILEQIIAKREIDEVILAISPTVEGETTAHFISQMIAK-DTKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200 >gi|72382490|ref|YP_291845.1| DNA replication and repair protein RecR [Prochlorococcus marinus str. NATL2A] gi|72002340|gb|AAZ58142.1| DNA replication and repair protein RecR [Prochlorococcus marinus str. NATL2A] Length = 182 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 122/182 (67%), Gaps = 1/182 (0%) Query: 20 IPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQ 79 +PG GPR+A+R LHL+++ E + +EA+ N ++V C C ++ + C IC+++Q Sbjct: 1 MPGIGPRTAQRLALHLLRQPEYKIRLFSEALLNAKSQVGQCKTCFHLTAGEQCEICLNKQ 60 Query: 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKI 139 R+ +I VV + DL ALER++ LYHV+GG +SP+D IGPE + I SLI+R++ I Sbjct: 61 RNQELICVVSESRDLLALERTREYKGLYHVIGGLISPMDGIGPEMLEISSLIKRVDKANI 120 Query: 140 RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 +E+I A++ +IEG TT+ Y+ LK K+TR+AYG+P+GSEL+Y D+ T+ A+ R Sbjct: 121 KEVILALTPSIEGDTTSLYVGRLLKPF-TKVTRIAYGLPVGSELEYADEVTLSRALEGRR 179 Query: 200 VL 201 L Sbjct: 180 DL 181 >gi|226939893|ref|YP_002794966.1| recombination protein RecR [Laribacter hongkongensis HLHK9] gi|254790772|sp|C1D5E0|RECR_LARHH RecName: Full=Recombination protein recR gi|226714819|gb|ACO73957.1| RecR [Laribacter hongkongensis HLHK9] Length = 203 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 110/196 (56%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+LI L +PG GP++A+R HL+++ LA A+ + + + C+ C Sbjct: 3 TPASLESLITALRVLPGVGPKTAQRMAYHLMQRDPGGADRLARAIDHARSHLKHCARCNT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 T+ C +C D QR V+ VVE AD +E++ + + LY VL G +SPLD + DI Sbjct: 63 FSETELCVLCADDQRRQDVLCVVEMPADALMIEQTHSYDGLYFVLMGKVSPLDGLTARDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L R + E+I A + T EG+ TAH + K + ++R+A G+P+G EL++ Sbjct: 123 PLEQLARRALDGTVNEVILATNFTAEGEATAHVLATLFKDRGLSVSRIARGLPVGGELEH 182 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ +A+ R L Sbjct: 183 VDAGTLAQALYERRRL 198 >gi|110932060|gb|ABH02983.1| RecR [Spirochaeta aurantia] Length = 182 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 77/181 (42%), Positives = 108/181 (59%) Query: 21 PGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80 PG G +SA R HL+K L L ++ + + V CSICGN DPC IC D R Sbjct: 1 PGLGKKSAVRMAFHLLKADRDYLNQLGRQISTLRDSVVRCSICGNYTEADPCEICSDPTR 60 Query: 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIR 140 D +V+ VVE V DL L+ + L+HVL G ++PLD IGP ++G+ L R+ +R Sbjct: 61 DQTVLCVVEQVQDLMNLQATGEFRGLFHVLHGVIAPLDGIGPAELGLDRLDRRLAEGTVR 120 Query: 141 ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 E+I A + T+EG TTA YI L +KITRLA G+P+G +L+Y D TI A+++R+ Sbjct: 121 EVILATNPTLEGDTTALYIHRMLGPRQLKITRLASGLPVGGDLEYADRLTIARALKARSG 180 Query: 201 L 201 + Sbjct: 181 M 181 >gi|84500403|ref|ZP_00998652.1| recombination protein RecR [Oceanicola batsensis HTCC2597] gi|84391356|gb|EAQ03688.1| recombination protein RecR [Oceanicola batsensis HTCC2597] Length = 197 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 139/191 (72%), Gaps = 1/191 (0%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +IE LI ++AR+PG GPRSARRA L +++KKE LL PLA+ M ++ V C+ CGN+ Sbjct: 6 DIEALIDMMARLPGLGPRSARRAVLQMIRKKELLLTPLADLMHHVAATVRECATCGNIGA 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 C IC ++R I VVEDVADLWA+ERS YHVLGG+LS LD +GPE++ I Sbjct: 66 GQICDICASEKRATGEICVVEDVADLWAMERSAVFGGRYHVLGGTLSALDAVGPEELRIP 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++R+ +++ E+I A++AT++GQTTAHYI D+L+G V++T LA G+P+G ELDYLDD Sbjct: 126 KLVQRVTDERVTEVILALNATVDGQTTAHYIADQLEGR-VRLTSLAQGVPIGGELDYLDD 184 Query: 189 GTIFEAIRSRT 199 GTI A+R+R Sbjct: 185 GTITAALRARK 195 >gi|328954116|ref|YP_004371450.1| Recombination protein recR [Desulfobacca acetoxidans DSM 11109] gi|328454440|gb|AEB10269.1| Recombination protein recR [Desulfobacca acetoxidans DSM 11109] Length = 201 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 120/199 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + ++ +I+ L+R PG G ++A R L+L++ + + LA+A+ ++ K+ LC Sbjct: 1 MARNFYPAPLQKVIRGLSRWPGIGEKTATRLALYLLRAADTEVTELAQALIDLKAKIRLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C + C IC D R+ ++VV D DL ALER YHVLGG +SPLD + Sbjct: 61 SRCFAFADQELCPICADPGRNNGQLVVVADPGDLIALERVGFFQGAYHVLGGLISPLDNV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I L+ R+ + I E+I A++ ++EG+ T Y+ +L+G VK+TR+AYG+PMG Sbjct: 121 GPRDLHISELLSRLHSEAIEEVILALNPSLEGEATTAYLAQELQGKPVKVTRIAYGLPMG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 +L Y D TI E++R R Sbjct: 181 GDLKYADQQTIKESLRHRV 199 >gi|225848980|ref|YP_002729144.1| recombination protein RecR [Sulfurihydrogenibium azorense Az-Fu1] gi|225644146|gb|ACN99196.1| recombination protein RecR [Sulfurihydrogenibium azorense Az-Fu1] Length = 199 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 123/199 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++ +I+ ++ +PG+G +SA+R ++L+K L + +A + +K+ C Sbjct: 1 MNYIPDILKKVIEDISNLPGYGEKSAQRLAINLLKLPRGEAVDLIKHIAQMLDKIHPCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + C IC ++RD + I VVE+ D +A+E++ +YHVLGG LSPL+ IGP Sbjct: 61 CGIYTDQEICPICSSEERDKTHICVVEESFDAYAIEKTGKFKGVYHVLGGRLSPLEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + I++LIERI+ +++E+I A + T+EG+ T +YI + LK + ITRLAYG+P GS Sbjct: 121 EKLNIKTLIERIKKYQVKEVIIATNPTVEGEATGNYIYNLLKKYPLNITRLAYGLPFGSV 180 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ DD T+ +A+ R + Sbjct: 181 LENADDFTLSKALEYRVKI 199 >gi|78224610|ref|YP_386357.1| recombination protein RecR [Geobacter metallireducens GS-15] gi|123570728|sp|Q39Q42|RECR_GEOMG RecName: Full=Recombination protein recR gi|78195865|gb|ABB33632.1| DNA replication and repair protein RecR [Geobacter metallireducens GS-15] Length = 197 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 123/196 (62%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L+ L ++PG G ++A R HL+K E LAE++ + ++V CS+C Sbjct: 4 SSNSFARLLAELQKLPGVGEKTALRLAFHLLKYPENTA-ALAESLGEVLSRVKFCSVCFG 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC +C RD + + VVE+ DL A+ER++A YHVL G+LSPL+ + P+ + Sbjct: 63 ITEEDPCRLCSSD-RDETSLCVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R+E +RE++ A + ++EG+TTA Y+ ++K + +++TRLA+GIP+GS+L+Y Sbjct: 122 RIAELMRRLEEGTVREVVIATNFSVEGETTALYLARQIKPLGIRVTRLAHGIPLGSDLEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A+ R+ L Sbjct: 182 VDAATVQRALEGRSEL 197 >gi|163857864|ref|YP_001632162.1| recombination protein RecR [Bordetella petrii DSM 12804] gi|229890129|sp|A9HZ10|RECR_BORPD RecName: Full=Recombination protein recR gi|163261592|emb|CAP43894.1| recombination protein RecR [Bordetella petrii] Length = 202 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 1/201 (0%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M ++ + + +LI+ L R+PG G RSARR HL++ Q L A+A + Sbjct: 1 MDPQLPEPEPLVSLIEALRRLPGVGVRSARRMAYHLMQHDLQGADMLGRALAGAVQNLRH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C + D CA C + +RD SV+ VVE AD +E S LY+VL G ++PL+ Sbjct: 61 CARCNSFTEDDICATCANPKRDPSVLCVVETPADQNMIEASHGYRGLYYVLMGRVAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 IGP ++ Q L+ER +RE+I A + T EG+TTAH++ + L G +K+TRLA G+P Sbjct: 121 IGPRELDFQRLLERASDGVVREVILATNFTAEGETTAHFLGEVLAGKGLKVTRLARGVPA 180 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 GSEL+Y+D GTI A+ R Sbjct: 181 GSELEYVDAGTIAWALMERKS 201 >gi|299140392|ref|ZP_07033551.1| recombination protein RecR [Acidobacterium sp. MP5ACTX8] gi|298597619|gb|EFI53798.1| recombination protein RecR [Acidobacterium sp. MP5ACTX8] Length = 200 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 122/203 (60%), Gaps = 5/203 (2%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + + LI L ++PG G ++A+R H+++ + LA+++ + + LC Sbjct: 1 MATRFA-EPMARLIDELRKLPGVGTKTAQRYAFHILRSSDSDATTLADSIRALKQHLHLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 SIC N+ DPCA C R+ +I VVE+ ++ A+E+++ +YHVL G+LSP++ + Sbjct: 60 SICNNITDVDPCAYCTSPARNTHLICVVEEPTNINAIEKTRTYTGVYHVLHGTLSPVNGV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIP 178 GPE + +++L R+ + ELI A S T+EG+ TA Y++D ++ + I+R+A G+P Sbjct: 120 GPEQLRLRNLWPRL--AEAEELILATSPTVEGEATARYLLDDIRKTHPTLHISRIATGVP 177 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 GS+++Y D+ T+ A+ R L Sbjct: 178 AGSDIEYADEVTMTRALEGRRDL 200 >gi|218294871|ref|ZP_03495725.1| recombination protein RecR [Thermus aquaticus Y51MC23] gi|218244779|gb|EED11303.1| recombination protein RecR [Thermus aquaticus Y51MC23] Length = 194 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 131/196 (66%), Gaps = 4/196 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L + L+R+PG GP++A++ L L K ++ L E +A + + +C +CGN Sbjct: 3 YPESLLKLARALSRLPGIGPKTAQKLALFLAFHK-EVAEELKEGLAALR-DLGVCRVCGN 60 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D+ RD +++ VVE VADL+ALERS + +YHVLGG+L+PL+ +GP+D+ Sbjct: 61 LAEGELCPICQDEGRDRALLAVVETVADLYALERSGEFSGVYHVLGGALNPLEGVGPKDL 120 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++SL R+ +++RE+I A S T+EG+ TA ++ ++LK VK TRLAYG+P+G L+Y Sbjct: 121 NLESLWPRL--QEVREVILATSMTVEGEATALFLAEELKKRGVKATRLAYGLPVGGSLEY 178 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ R L Sbjct: 179 VDEVTLGRALEGRKPL 194 >gi|88608709|ref|YP_506765.1| recombination protein RecR [Neorickettsia sennetsu str. Miyayama] gi|123491366|sp|Q2GCN1|RECR_NEOSM RecName: Full=Recombination protein recR gi|88600878|gb|ABD46346.1| recombination protein RecR [Neorickettsia sennetsu str. Miyayama] Length = 196 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 88/192 (45%), Positives = 131/192 (68%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K+I+ LIK+ +PG GP+SARR LHL+K +E L + M +Y + C +CGN++ Sbjct: 3 KKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGNLE 62 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + PC+IC +R + ++ VVE++ DLWA+E++ N YHVL G+LS +D I PE + I Sbjct: 63 SESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETLQI 122 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L R+ ++ELI A +AT+EGQTTA YI++ LKG VK++ LA+GIP+GSE+DYLD Sbjct: 123 EKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGTQVKLSFLAHGIPVGSEMDYLD 182 Query: 188 DGTIFEAIRSRT 199 +GT+ A +R Sbjct: 183 EGTLGIAFANRR 194 >gi|84516009|ref|ZP_01003370.1| recombination protein RecR [Loktanella vestfoldensis SKA53] gi|84510451|gb|EAQ06907.1| recombination protein RecR [Loktanella vestfoldensis SKA53] Length = 197 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 2/194 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 +++++LI ++A++PG GPRSARRA LH++KK+ +L PLA+A+ + + V C C N+ Sbjct: 6 EDLDHLIAMMAKLPGLGPRSARRAVLHMIKKRNLVLLPLADALQKVGSTVRECLNCANIC 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 T+D C IC+ +R I VVEDVADLWA+ERS YHVLGG+LS LD +GP+++ I Sbjct: 66 TSDLCDICLSDKRATGQIAVVEDVADLWAMERSGVFKGRYHVLGGTLSALDAVGPDELRI 125 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 LI+RI + + E+I A+ ATI+G TTAHYI D+L V +T LA G+P+G ELDYLD Sbjct: 126 PKLIDRIAAENVTEVIIALGATIDGLTTAHYIADQL--PGVSVTSLAQGVPVGGELDYLD 183 Query: 188 DGTIFEAIRSRTVL 201 DGTI A+ +R L Sbjct: 184 DGTITAALNARKAL 197 >gi|326383523|ref|ZP_08205209.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395] gi|326197607|gb|EGD54795.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395] Length = 203 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 122/202 (60%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI LA++PG GP+ A+R HL+ + + L A+ ++ + V C+ CG Sbjct: 1 MYEGPIQDLIDQLAKLPGLGPKGAQRIAFHLLAGENVEIDRLIAALGHVRDDVTFCTECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RDA+ I VVE+ D++A+ER+K + YHVLGG+L PL IGP+ Sbjct: 61 NVAADTLCRICGDARRDATKICVVEEPKDIYAIERTKEFDGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ R+ + + + E+I A EG+ TA Y++ LK + +TRLA G+PM Sbjct: 121 LRIRELLRRLGDQPDGQDVSEIIVATDPNTEGEATATYLLRMLKDFPGLSVTRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R VL Sbjct: 181 GGDLEFADELTLGRALSGRRVL 202 >gi|326560440|gb|EGE10822.1| recombination protein RecR [Moraxella catarrhalis 7169] gi|326561644|gb|EGE11981.1| recombination protein RecR [Moraxella catarrhalis 103P14B1] gi|326562607|gb|EGE12918.1| recombination protein RecR [Moraxella catarrhalis 46P47B1] gi|326563583|gb|EGE13837.1| recombination protein RecR [Moraxella catarrhalis 12P80B1] gi|326565825|gb|EGE15987.1| recombination protein RecR [Moraxella catarrhalis BC1] gi|326570480|gb|EGE20520.1| recombination protein RecR [Moraxella catarrhalis BC8] gi|326571164|gb|EGE21188.1| recombination protein RecR [Moraxella catarrhalis BC7] gi|326573454|gb|EGE23422.1| recombination protein RecR [Moraxella catarrhalis 101P30B1] gi|326575648|gb|EGE25571.1| recombination protein RecR [Moraxella catarrhalis CO72] gi|326577112|gb|EGE27006.1| recombination protein RecR [Moraxella catarrhalis O35E] Length = 198 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 117/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++ LIK L +P G +SA+R L L+ KK LA A+ + + C C Sbjct: 1 MLTPKLDKLIKELQVLPSVGQKSAQRMALQLLTKKRTQGLSLAAALETAMHDIKECLQCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC+D +RD ++ VVE+ +D+ A+E+S A Y VLGG LSP+D I D Sbjct: 61 SFSDDEICPICLDHRRDDGLLCVVENASDVMAIEQSGAYRGKYFVLGGHLSPIDGINAND 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I LI RI + I E+I A AT+EGQTTA +I D + KITRLA GIPMG EL Sbjct: 121 LHIDQLIHRIRHEAIHEVILATGATVEGQTTAFFIHDAICTHVPKITRLAQGIPMGGELG 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+++R+ + Sbjct: 181 YVDSITLHQALQNRSNI 197 >gi|187931732|ref|YP_001891717.1| recombination protein RecR [Francisella tularensis subsp. mediasiatica FSC147] gi|238691568|sp|B2SGT0|RECR_FRATM RecName: Full=Recombination protein recR gi|187712641|gb|ACD30938.1| RecFOR complex, RecR component [Francisella tularensis subsp. mediasiatica FSC147] Length = 200 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLNILQQIIADRKIDEVILAISPTVEGETTAHFISQMIVK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200 >gi|167465483|ref|ZP_02330572.1| recombination protein RecR [Paenibacillus larvae subsp. larvae BRL-230010] Length = 178 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 73/177 (41%), Positives = 115/177 (64%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +R+PG GP++A R H+++ KE+ + A+A+ N+ + CS+C Sbjct: 2 FYPEPISKLIDAFSRLPGVGPKTAGRLAFHVLRMKEEEVLDFAKALVNVKRNLHYCSVCC 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPC IC D+ RD S+I VV++ DL A+ER+K + YHVL G++SP++ IGP+ Sbjct: 62 NITDVDPCRICQDKSRDDSIICVVQEPKDLAAMERTKEFDGYYHVLHGAISPMEGIGPDQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 I I L++R+ +K++ELI A + IEG+ TA YI +KG +K+TR+A G+P+G Sbjct: 122 IHIAELLKRLGDEKVQELILATNPNIEGEATAMYISRLVKGFGLKVTRIARGLPVGG 178 >gi|332678503|gb|AEE87632.1| Recombination protein RecR [Francisella cf. novicida Fx1] Length = 200 Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KI +I +I+ L ++P G +S++R TL+L+ K + +A ++ + + C Sbjct: 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLTLYLLDKSPETAIAIANSLLDATANIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C + D C IC + RD + + ++E + D+ A+E + Y VL G +SPLD I Sbjct: 61 VYCQALTEDDVCNICSNTNRDDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I +KI E+I AIS T+EG+TTAH+I + D+KI+R+ +G+P G Sbjct: 121 GPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFISQMIAK-DIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLLHAFNARTNI 200 >gi|258541158|ref|YP_003186591.1| recombination protein RecR [Acetobacter pasteurianus IFO 3283-01] gi|256632236|dbj|BAH98211.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-01] gi|256635293|dbj|BAI01262.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-03] gi|256638348|dbj|BAI04310.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-07] gi|256641402|dbj|BAI07357.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-22] gi|256644457|dbj|BAI10405.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-26] gi|256647512|dbj|BAI13453.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-32] gi|256650565|dbj|BAI16499.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653556|dbj|BAI19483.1| DNA recombinase RecR [Acetobacter pasteurianus IFO 3283-12] Length = 198 Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 101/197 (51%), Positives = 134/197 (68%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G+EIE LI++L R+PGFGPRSARR L+L+K+ + L PLA AM N + CS CG Sbjct: 1 MGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLAHAMERAGNAIKTCSSCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT DPC IC D RD +I VVE V DLWALER+ +Y VLGG+LSPL IGPED Sbjct: 61 NLDTIDPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSEL 183 + + L E++ +RE+I A+ AT+EG TT H++MD+L V ++R+A G+PMG L Sbjct: 121 LDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLAPYGGVTVSRVAQGVPMGGAL 180 Query: 184 DYLDDGTIFEAIRSRTV 200 D LDDGT+ A+ +R Sbjct: 181 DVLDDGTLAAALGARRP 197 >gi|114565608|ref|YP_752762.1| recombination protein RecR [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122319210|sp|Q0B0W3|RECR_SYNWW RecName: Full=Recombination protein recR gi|114336543|gb|ABI67391.1| DNA replication and repair protein RecR [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 197 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 117/194 (60%), Gaps = 1/194 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + +ENLI L ++PG GP++A+R L+++K E LA+A+ + KV CS CG + Sbjct: 5 RPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRCGYLT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC IC D+ RD S+I + E+ +D+ A+ER+ Y VL + ++ G ED+ + Sbjct: 65 DFDPCLICSDESRDKSLICIGEESSDVIAIERTG-FRGQYFVLNKDFNLMEDKGLEDLNL 123 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L +R+ +I+E++ A++ ++G+ + ++ VK+TRLA+G+P+G ++++ D Sbjct: 124 KPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGDIEFAD 183 Query: 188 DGTIFEAIRSRTVL 201 + T+ A+ R L Sbjct: 184 EITLRRALEGRKEL 197 >gi|134094279|ref|YP_001099354.1| recombination protein RecR [Herminiimonas arsenicoxydans] Length = 185 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 110/184 (59%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76 + R+PG GP+SA+R HL++ L A++ +V C++C + C C+ Sbjct: 1 MRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNTFTESAVCETCL 60 Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136 D +R+A+++ VVE D +E++ LY VL G LSPLD IGP+DI ++ LI R Sbjct: 61 DAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDIHLEKLISRATD 120 Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196 ++E++ A + T EG+ TAHYI + LK +K++RLA G+P+G EL+Y+D GTI A+ Sbjct: 121 GIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAML 180 Query: 197 SRTV 200 R Sbjct: 181 DRRT 184 >gi|162448235|ref|YP_001621367.1| recombination DNA repair protein [Acholeplasma laidlawii PG-8A] gi|161986342|gb|ABX81991.1| recombination DNA repair protein [Acholeplasma laidlawii PG-8A] Length = 195 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 2/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI L ++PG G ++A R LHL + L + + + C ICG Sbjct: 1 MYPTIILELIDDLKKLPGIGEKTAERLALHLTNWDSEDLKHFGTHLIELKTNISFCDICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C+IC D+ +D + I+VV D D++A+E++K + YHVL G + I P+D Sbjct: 61 LLTDDHICSICKDETKDKTQIMVVSDSKDVFAIEKTKTFHGNYHVLNGLIDFSKGIEPKD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L R+ K I+E+I A ++ +EG+ TA YI K +D+ I+RL YG+P+G++L Sbjct: 121 LNFDKLTNRV--KDIKEIIIATNSNVEGELTAQYIKSLYKDLDLTISRLGYGLPVGADLK 178 Query: 185 YLDDGTIFEAIRSRTV 200 Y D T+ +A+ +R Sbjct: 179 YADQLTLTKAVENRQK 194 >gi|94271396|ref|ZP_01291948.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1] gi|93450456|gb|EAT01636.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1] Length = 203 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 126/200 (63%), Gaps = 2/200 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +E LI ++PG G +SA R LHL+++ LA ++ ++ + +CS Sbjct: 1 MNVIPPALERLIADFGKLPGIGRKSATRLALHLLRRPALEAQGLARSLHELHQLITMCSS 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C DPC IC + RDAS++ VVE+ DL A+E++ + YH+L G+LSP+D IGP Sbjct: 61 CCAFSEEDPCEICRNPGRDASLVCVVEEPGDLLAIEKTSSYKGRYHILHGALSPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMG 180 +++ I L+ERI+ +++RE++ A S+T+ G+ TA Y++D+L+ V++TRLAYGIPMG Sbjct: 121 KELKIGLLLERIKREQVREVLIATSSTVPGEATASYLIDQLQQHTTGVRLTRLAYGIPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ++ Y D+ T+ AI +R Sbjct: 181 MDIKYADELTLARAIETRQE 200 >gi|187477419|ref|YP_785443.1| recombination protein RecR [Bordetella avium 197N] gi|123513969|sp|Q2KVU4|RECR_BORA1 RecName: Full=Recombination protein recR gi|115422005|emb|CAJ48527.1| recombination protein [Bordetella avium 197N] Length = 202 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 1/200 (0%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + + LI+ L R+PG G RSARR HL++ Q L A+A + Sbjct: 1 MDNALPEPEPLIALIEALRRLPGVGARSARRMAYHLLQHDVQGADMLGRALAGAVQNLRR 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C + D C IC + +RDAS++ +VE AD +E S LY+VL G L+PL+ Sbjct: 61 CARCNSFTEDDVCVICANPKRDASLLCIVETPADQNVIESSHGYRGLYYVLMGRLAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GP ++ Q +++R ++E+I A + T EG+TTAH++ + L +K+TRLA G+P Sbjct: 121 VGPRELDFQRVLDRAADGLVQEVILATNFTAEGETTAHFLGEALAERGLKVTRLARGVPA 180 Query: 180 GSELDYLDDGTIFEAIRSRT 199 GSEL+Y+D GTI A+ R Sbjct: 181 GSELEYVDAGTIAWALMERR 200 >gi|224541624|ref|ZP_03682163.1| hypothetical protein CATMIT_00795 [Catenibacterium mitsuokai DSM 15897] gi|224525462|gb|EEF94567.1| hypothetical protein CATMIT_00795 [Catenibacterium mitsuokai DSM 15897] Length = 197 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 1/195 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K E L+ +PG G + A R + E+ + ++A+ + V C ICGN Sbjct: 3 YPKSFEELMTCFKMLPGIGNKGAERMAYAIYDMSEEDVKRFSQALTSFKENVHTCPICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC D +RD S I VVE D++A+E+ K + LYHVLGG++S +D +D+ Sbjct: 63 LSEGDKCEICADHERDQSTICVVESPKDVFAMEKMKEYHGLYHVLGGTISIMDGKTMDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL +RI +E+I A +AT EG+TTA ++ L V TR+A+G+P+GS LDY Sbjct: 123 NIMSLFDRI-TPDTKEVIIATNATREGETTALFLAKLLDKKGVNTTRIAHGLPIGSSLDY 181 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ ++ R Sbjct: 182 ADELTLLKSFEGRKK 196 >gi|317406000|gb|EFV86278.1| recombination protein recR [Achromobacter xylosoxidans C54] Length = 202 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 112/194 (57%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + + +LI+ L R+PG G RSARR HL++ Q L A+A + CS C + Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLRHCSRCNSF 67 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 D CA C + +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++ Sbjct: 68 AEEDVCATCANPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELD 127 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 +I R ++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+ Sbjct: 128 FDRVIRRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYV 187 Query: 187 DDGTIFEAIRSRTV 200 D GTI A+ R Sbjct: 188 DAGTIAWALMERKT 201 >gi|170025413|ref|YP_001721918.1| recombination protein RecR [Yersinia pseudotuberculosis YPIII] gi|186894363|ref|YP_001871475.1| recombination protein RecR [Yersinia pseudotuberculosis PB1/+] gi|294504859|ref|YP_003568921.1| recombination protein RecR [Yersinia pestis Z176003] gi|169751947|gb|ACA69465.1| recombination protein RecR [Yersinia pseudotuberculosis YPIII] gi|186697389|gb|ACC88018.1| recombination protein RecR [Yersinia pseudotuberculosis PB1/+] gi|262362923|gb|ACY59644.1| recombination protein RecR [Yersinia pestis D106004] gi|262366844|gb|ACY63401.1| recombination protein RecR [Yersinia pestis D182038] gi|294355318|gb|ADE65659.1| recombination protein RecR [Yersinia pestis Z176003] Length = 191 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 1/189 (0%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCA 73 ++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C + C Sbjct: 1 MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCT 60 Query: 74 ICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC++ +R + I VVE AD+ A+E++ Y VL G LSP+D IGP DIG+ L + Sbjct: 61 ICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK 120 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R+ + I E+I A + T+EG TA+YI + +R+A+G+P+G EL+ +D T+ Sbjct: 121 RLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELEMVDGTTLS 180 Query: 193 EAIRSRTVL 201 ++ R + Sbjct: 181 HSLAGRNPI 189 >gi|296113064|ref|YP_003627002.1| recombination protein RecR [Moraxella catarrhalis RH4] gi|295920758|gb|ADG61109.1| recombination protein RecR [Moraxella catarrhalis RH4] Length = 198 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 117/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++ LIK L +P G +SA+R L L+ KK LA A+ + + C C Sbjct: 1 MLTPKLDKLIKELQVLPSVGQKSAQRMALQLLTKKRTQGLSLAAALETAMHDIKECLQCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C IC+D +RD ++ VVE+ +D+ A+E+S A Y VLGG LSP+D I D Sbjct: 61 SFSDDEICPICLDHRRDDGLLCVVENASDVIAIEQSGAYRGKYFVLGGHLSPIDGINAND 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I LI RI + I E+I A AT+EGQTTA +I D + KITRLA GIPMG EL Sbjct: 121 LHIDQLIHRIRHEAIHEVILATGATVEGQTTAFFIHDAICTHVPKITRLAQGIPMGGELG 180 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +A+++R+ + Sbjct: 181 YVDSITLHQALQNRSNI 197 >gi|148266339|ref|YP_001233045.1| recombination protein RecR [Geobacter uraniireducens Rf4] gi|189029364|sp|A5G9K4|RECR_GEOUR RecName: Full=Recombination protein recR gi|146399839|gb|ABQ28472.1| DNA replication and repair protein RecR [Geobacter uraniireducens Rf4] Length = 197 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 121/195 (62%), Gaps = 2/195 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + + L+ L ++P G ++A R HL+K E L LA+++ + + V CS C + Sbjct: 5 SRSLTKLLGELKKLPSVGDKTALRLAFHLLKSPEN-LSALAKSLLEVRDGVRFCSTCFGI 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 +DPC +C RD + I VVE+ D+ A+ERS+A YHVL G+LSPL+ + P + Sbjct: 64 TESDPCHLCT-TPRDDASICVVEEPQDILAMERSQAFKGRYHVLHGALSPLNGVTPGQLR 122 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I L++R+E ++E++ A + T+EG+ TA Y+ +K + +K+TRLA+GIP+GS+L+Y+ Sbjct: 123 IAELLQRLENGSVKEVLLATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPIGSDLEYV 182 Query: 187 DDGTIFEAIRSRTVL 201 D T+ A+ R+ L Sbjct: 183 DAATVQRAVEGRSEL 197 >gi|91788141|ref|YP_549093.1| recombination protein RecR [Polaromonas sp. JS666] gi|122967827|sp|Q12B97|RECR_POLSJ RecName: Full=Recombination protein recR gi|91697366|gb|ABE44195.1| DNA replication and repair protein RecR [Polaromonas sp. JS666] Length = 208 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 115/205 (56%), Gaps = 12/205 (5%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E L + L ++PG G +SA R HL++ + +A A+ + N V C++C + Sbjct: 4 SNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLCNTL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + CA C + QRD S + VVE AD ALER+ A LY VL G LSPLD IGP DIG Sbjct: 64 TEQEVCATCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPNDIG 123 Query: 127 IQSLIERIEVKKIR------------ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174 +Q L +R+ + E+I A + T EG+ TAH I LK V++TRLA Sbjct: 124 LQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQVTRLA 183 Query: 175 YGIPMGSELDYLDDGTIFEAIRSRT 199 G+P+GSEL+Y+D GTI A+ R Sbjct: 184 RGVPVGSELEYVDLGTIAHALVDRR 208 >gi|297170604|gb|ADI21630.1| recombinational DNA repair protein (recF pathway) [uncultured myxobacterium HF0130_06F04] Length = 207 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 8/204 (3%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQ--------LLGPLAEAMANIYNK 56 ++ IE LI + R+PG G R+A R +L+K+ L LA A+ + ++ Sbjct: 1 MSADPIERLILEMGRLPGIGERTAARLAFYLLKQARDAEARGLSTLARDLALALTEVVDE 60 Query: 57 VCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116 V LCS C N+ +D C+IC D RD ++ VVE+V+DL ALE S A YHVL G+L+P Sbjct: 61 VRLCSRCQNLCASDLCSICEDTTRDERLLCVVENVSDLRALEASGAYRGTYHVLHGALAP 120 Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 LD +GP D+ + L +R+ +E+I A++A +EG TA Y+ L DVK++RLA G Sbjct: 121 LDGVGPADLKLPELADRVVRGGYQEVILAMNADVEGDATALYLARLLGAGDVKLSRLASG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRTV 200 +P+G EL+YLD TI A+ +RT Sbjct: 181 VPLGGELEYLDQATIGRALTARTP 204 >gi|289450283|ref|YP_003475321.1| recombination protein RecR [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184830|gb|ADC91255.1| recombination protein RecR [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 200 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + NLI L ++P G R+A++ +++ E LA+A+ ++ LC Sbjct: 1 MSQ--FPPVLANLISKLGQLPTIGNRTAQKLAFYIMSMPEAEALALADAVRKARTEIHLC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C N+ ++ C+IC D+ RD S+I VVE AD+ ALE+ + YHVL G++SPL I Sbjct: 59 SVCCNLTDSEVCSICADKTRDNSIICVVESPADVSALEKLHVFHGRYHVLHGAVSPLKNI 118 Query: 121 GPEDIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 GP+DI ++ L R+ +I+E+ A S+T EG+ TA YI LK +K TRLA+G+PM Sbjct: 119 GPDDIKLKELFSRLAAEPEIKEVFLANSSTPEGEATALYISRLLKPAGIKTTRLAHGLPM 178 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 GS L++ D+ T+ +AI R + Sbjct: 179 GSSLEFADEITLSKAIEGRREI 200 >gi|56416635|ref|YP_153709.1| recombination protein [Anaplasma marginale str. St. Maries] gi|56387867|gb|AAV86454.1| recombination protein [Anaplasma marginale str. St. Maries] Length = 213 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 89/193 (46%), Positives = 131/193 (67%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT Sbjct: 20 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 79 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ + Sbjct: 80 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 139 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+ Sbjct: 140 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 199 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR V+ Sbjct: 200 GTLRAALSSRYVI 212 >gi|257125660|ref|YP_003163774.1| recombination protein RecR [Leptotrichia buccalis C-1013-b] gi|257049599|gb|ACV38783.1| recombination protein RecR [Leptotrichia buccalis C-1013-b] Length = 198 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 120/192 (62%), Gaps = 1/192 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K++++LI + A++PG G +SA R +++K E + + E + + + + C ICGN+ Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLEKSEADIDRMLEIIKDSHTNIKHCEICGNLS 61 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC +++RD VI VVE V D+ A E+S+ N LYHVLGG + PL+ + ED+ + Sbjct: 62 ENDICEICANEKRDKEVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNL 121 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L+ R+ ++E+I A++ +EG+TT+ Y+ LK +VKI+++A GIPMG ++Y D Sbjct: 122 MKLMRRL-DGNVKEIILALNPDLEGETTSLYLTKFLKDKNVKISKIASGIPMGGNIEYTD 180 Query: 188 DGTIFEAIRSRT 199 T+ ++ R Sbjct: 181 MATLGRSLEGRV 192 >gi|169335256|ref|ZP_02862449.1| hypothetical protein ANASTE_01664 [Anaerofustis stercorihominis DSM 17244] gi|169257994|gb|EDS71960.1| hypothetical protein ANASTE_01664 [Anaerofustis stercorihominis DSM 17244] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K I NLI L+++PG G ++A R +++ ++ + L+EA+ ++ CSI Sbjct: 1 MSVYSKPILNLINELSKLPGVGRKTASRLAYYIINMEQSDVDSLSEAIKVAKKELKYCSI 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC IC +RD S I+VV + DL A+E++K N LYHVLGG +SP++ I Sbjct: 61 CYNITDKDPCDICSSTKRDKSTILVVSESKDLIAIEKTKEYNGLYHVLGGVISPMEGIMV 120 Query: 123 EDIGIQSLIERI-EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMG 180 EDI I+ LI RI + E+I A +EG+TTA I LK DVK+TR+A G+P G Sbjct: 121 EDIRIKELISRIGTSDDVEEVILATGFNVEGETTAMVIKKLLKPFDDVKVTRIAKGLPQG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 ++L+Y D T+ AI R + Sbjct: 181 ADLEYTDGATLANAIIGRNEI 201 >gi|51473627|ref|YP_067384.1| recombination protein RecR [Rickettsia typhi str. Wilmington] gi|73621512|sp|Q68WU0|RECR_RICTY RecName: Full=Recombination protein recR gi|51459939|gb|AAU03902.1| recombination protein RecR [Rickettsia typhi str. Wilmington] Length = 199 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 89/200 (44%), Positives = 127/200 (63%), Gaps = 3/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K +I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C Sbjct: 1 MNK---TNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN+DT + C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R Sbjct: 58 EICGNMDTKNICHICSSEHRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQ 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P + + L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G Sbjct: 118 NPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIG 177 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 178 GELDYLDEGTLSAAINLRQP 197 >gi|254797228|ref|YP_003082069.1| recombination protein RecR [Neorickettsia risticii str. Illinois] gi|254590472|gb|ACT69834.1| recombination protein RecR [Neorickettsia risticii str. Illinois] Length = 196 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 85/192 (44%), Positives = 130/192 (67%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K+I+ LI + +PG GP+SARR LHL+K KE L + M ++ + C +CGN++ Sbjct: 3 KKIKALINLAESLPGLGPKSARRIVLHLLKSKETTLMRFIDTMQVLFETIKHCELCGNLE 62 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + PC+IC +R + ++ VVE++ DLWA+E++ + YHVL G+LS ++ I PE + I Sbjct: 63 SESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHSGRYHVLNGALSIVNGITPETLQI 122 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L R+ ++ELI A +AT+EGQTTA YI++ LKG VK++ LA+GIP+GSE+DYLD Sbjct: 123 EKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGAQVKLSFLAHGIPVGSEMDYLD 182 Query: 188 DGTIFEAIRSRT 199 +GT+ A +R Sbjct: 183 EGTLGIAFANRR 194 >gi|329114768|ref|ZP_08243525.1| Recombination protein RecR [Acetobacter pomorum DM001] gi|326695899|gb|EGE47583.1| Recombination protein RecR [Acetobacter pomorum DM001] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 1/200 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + G+EIE LI++L R+PGFGPRSARR L+L+K+ + L PLA AM N + CS Sbjct: 1 MSGMGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLARAMERAGNAIKTCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CGN+DT +PC IC D RD +I VVE V DLWALER+ +Y VLGG+LSPL IG Sbjct: 61 SCGNLDTINPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMG 180 PED+ + L E++ +RE+I A+ AT+EG TT H++MD+L V ++R+A G+PMG Sbjct: 121 PEDLDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLASYGGVTVSRVAQGVPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 LD LDDGT+ A+ +R Sbjct: 181 GALDVLDDGTLAAALGARRP 200 >gi|255002981|ref|ZP_05277945.1| recombination protein RecR [Anaplasma marginale str. Puerto Rico] gi|255004107|ref|ZP_05278908.1| recombination protein RecR [Anaplasma marginale str. Virginia] gi|269958950|ref|YP_003328739.1| recombination protein RecR [Anaplasma centrale str. Israel] gi|172045888|sp|Q5PB75|RECR_ANAMM RecName: Full=Recombination protein recR gi|269848781|gb|ACZ49425.1| recombination protein RecR [Anaplasma centrale str. Israel] Length = 195 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 89/193 (46%), Positives = 131/193 (67%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 +I LI + A++P GP S+RR LHL++ ++ ++ PLA + + C+IC N+DT Sbjct: 2 DITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDT 61 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 PC+IC D+ RD S+I VVE++ DLWA ER + + +YHVLGG+LS L IGPED+ + Sbjct: 62 ISPCSICSDKGRDQSIICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 +++RI ++E+I A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+ Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181 Query: 189 GTIFEAIRSRTVL 201 GT+ A+ SR V+ Sbjct: 182 GTLRAALSSRYVI 194 >gi|33592643|ref|NP_880287.1| recombination protein RecR [Bordetella pertussis Tohama I] gi|73621471|sp|Q7VY12|RECR_BORPE RecName: Full=Recombination protein recR gi|33572289|emb|CAE41841.1| recombination protein RecR [Bordetella pertussis Tohama I] gi|332382060|gb|AEE66907.1| recombination protein RecR [Bordetella pertussis CS] Length = 202 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M ++ + + LI+ L R+PG G RSARR HL++ Q L A++ + Sbjct: 1 MDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSAAVQHLRH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C + + CA C + +RD ++ +VE AD +E S LY+VL G ++PL+ Sbjct: 61 CARCNSFTEDEVCATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GP ++ Q +IER ++E+I A + T EG+TTAH++ D L +K+TRLA G+P Sbjct: 121 VGPRELDFQRVIERACDGVVQEVILATNFTAEGETTAHFLDDALSERGLKVTRLARGVPA 180 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 GSEL+Y+D GTI A+ R Sbjct: 181 GSELEYVDAGTIAWALMERRS 201 >gi|148655671|ref|YP_001275876.1| recombination protein RecR [Roseiflexus sp. RS-1] gi|172048083|sp|A5UTH3|RECR_ROSS1 RecName: Full=Recombination protein recR gi|148567781|gb|ABQ89926.1| recombination protein RecR [Roseiflexus sp. RS-1] Length = 205 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 116/198 (58%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 +I + LI+ L R+PG GP++A R T L++ + L LA A+ + +V LCS C Sbjct: 8 QILPAPVIRLIEELNRLPGVGPKTASRLTFFLLRAPDDLPLALAHALTALKQQVQLCSRC 67 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + D CAIC + RD VI VVE+ D+ A+ER+ LYHVL G ++PL+ + E Sbjct: 68 YFITQGDLCAICANPARDQRVICVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNRE 127 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 DI L++R+ + + E+I A + +EG+ TA ++ L + V++TRLA G+P G +L Sbjct: 128 DIYFDELLDRVRAEPVEEVIIATNPNLEGEATAFHLQRALAPLGVRVTRLARGLPTGGDL 187 Query: 184 DYLDDGTIFEAIRSRTVL 201 ++ D GT+ A+ R + Sbjct: 188 EWADPGTLGSALEGRREM 205 >gi|167957505|ref|ZP_02544579.1| recombination protein RecR [candidate division TM7 single-cell isolate TM7c] Length = 205 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 4/205 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++ + + LI L +PG G R+A R HL++ K + L+ ++AN+ V C Sbjct: 1 MAKQLLPRALTTLIDELGNLPGVGVRTAERYAYHLLRTKAESNKRLSNSIANLKANVKYC 60 Query: 61 SICGNV--DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118 + + + D R+ VI VVE+ D+ ALER+ N YHVLGG +SP+D Sbjct: 61 PATFALIDSDEEISPLYADPTRNKKVIAVVEEPLDIIALERTGQYNGTYHVLGGVISPID 120 Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYG 176 IGPE + I+ L+ RI+ ++ E+I A +A++EG++TA ++ +K I+VK++RLA G Sbjct: 121 NIGPEQLHIKELVIRIKQDEVEEIIIATNASVEGESTALFLQRYIKENEINVKMSRLARG 180 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 +P+G +L+Y D T+ A+ R L Sbjct: 181 LPVGVDLEYADQITLSHALEGRRSL 205 >gi|85703836|ref|ZP_01034939.1| recombination protein RecR [Roseovarius sp. 217] gi|85671156|gb|EAQ26014.1| recombination protein RecR [Roseovarius sp. 217] Length = 205 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 103/196 (52%), Positives = 139/196 (70%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +EI+ LI ++AR+PG GPRSARRA LH+++K+ LL PLA M + + C+ CGN Sbjct: 11 STREIDALIDMMARLPGLGPRSARRAVLHMIRKRALLLAPLARLMQIVADTARECATCGN 70 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TT+ C IC +R I VVEDVADLWA+ER +A YHVLGG+LS LD++GPE + Sbjct: 71 IGTTEICDICASAKRANGQICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDQVGPEVL 130 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R+E + I E+I A++AT++GQTTAHYI D+L G V +T LA G+P+G ELDY Sbjct: 131 RIPDLVARVESEAITEVILALNATVDGQTTAHYIADQLDG-KVTLTSLAQGVPIGGELDY 189 Query: 186 LDDGTIFEAIRSRTVL 201 LDDGTI A+ +R L Sbjct: 190 LDDGTISAALSARKRL 205 >gi|33600426|ref|NP_887986.1| recombination protein RecR [Bordetella bronchiseptica RB50] gi|73621469|sp|Q7WMF1|RECR_BORBR RecName: Full=Recombination protein recR gi|73621470|sp|Q7WAY7|RECR_BORPA RecName: Full=Recombination protein recR gi|33568025|emb|CAE31938.1| recombination protein RecR [Bordetella bronchiseptica RB50] Length = 202 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M ++ + + LI+ L R+PG G RSARR HL++ Q L A++ + Sbjct: 1 MDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSGAVQHLRH 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C + + CA C + +RD ++ +VE AD +E S LY+VL G ++PL+ Sbjct: 61 CARCNSFTEDEVCATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GP ++ Q +IER ++E+I A + T EG+TTAH++ D L +K+TRLA G+P Sbjct: 121 VGPRELDFQRVIERACDGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPA 180 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 GSEL+Y+D GTI A+ R Sbjct: 181 GSELEYVDAGTIAWALMERRS 201 >gi|20141819|sp|Q9ZDA4|RECR_RICPR RecName: Full=Recombination protein recR gi|292572052|gb|ADE29967.1| Recombination protein RecR [Rickettsia prowazekii Rp22] Length = 199 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 89/200 (44%), Positives = 126/200 (63%), Gaps = 3/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K +I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C Sbjct: 1 MNK---TNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN+DT C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R Sbjct: 58 EICGNLDTKSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQ 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P + + L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G Sbjct: 118 NPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIG 177 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 178 GELDYLDEGTLSAAISLRQP 197 >gi|260889568|ref|ZP_05900831.1| recombination protein RecR [Leptotrichia hofstadii F0254] gi|260860979|gb|EEX75479.1| recombination protein RecR [Leptotrichia hofstadii F0254] Length = 198 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 121/192 (63%), Gaps = 1/192 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K++++LI + A++PG G +SA R ++ + E + + E + + + + C ICGN+ Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLDRSEADIDRMLEIIKDSHANIKHCEICGNLS 61 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC +++RD VI VVE V D+ A E+S+ N LYHVLGG + PL+ + ED+ + Sbjct: 62 ENDICEICANEKRDKEVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNL 121 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ R+ + ++E+I A++ +EG+TT+ Y+ LK +VKI+++A GIPMG ++Y D Sbjct: 122 RKLMNRL-NEDVKEVILALNPDLEGETTSLYLTKFLKEKNVKISKIASGIPMGGNIEYTD 180 Query: 188 DGTIFEAIRSRT 199 T+ ++ R Sbjct: 181 MATLGRSLEGRV 192 >gi|291295538|ref|YP_003506936.1| recombination protein RecR [Meiothermus ruber DSM 1279] gi|290470497|gb|ADD27916.1| recombination protein RecR [Meiothermus ruber DSM 1279] Length = 195 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 120/194 (61%), Gaps = 4/194 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L++ LA +PG GP+SA++ L+LV+ + L+ + C +CGN Sbjct: 3 YPERLLKLVRALAGLPGVGPKSAQKLGLYLVQNPDASAELLSS--LQAAQALHPCPVCGN 60 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D +RD +VI VVE ++DL A+ERS + LYHVLGG+L+PL+ IGPE + Sbjct: 61 LAEDELCPICADPERDRTVICVVETISDLMAIERSGEYSGLYHVLGGALNPLEGIGPEQL 120 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L R+E E+I A T+EG+ TA Y+ ++L +++ TRLAYG+P+G L+Y Sbjct: 121 YLEKLFARLEGVN--EVILATGMTVEGEATAGYLAERLSQHNIRPTRLAYGLPVGGSLEY 178 Query: 186 LDDGTIFEAIRSRT 199 D+ T+ A+ +R Sbjct: 179 ADEVTLARALENRR 192 >gi|331011125|gb|EGH91181.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 200 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 2/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 63 LTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 121 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ERI + E+I A + T+EG+ TAHYI L + +R+A+ +P+G ELD Sbjct: 122 GIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHRVPLGGELD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 182 LVDGGTLAHSFAGRKPI 198 >gi|91216056|ref|ZP_01253025.1| recombination protein RecR [Psychroflexus torquis ATCC 700755] gi|91186033|gb|EAS72407.1| recombination protein RecR [Psychroflexus torquis ATCC 700755] Length = 207 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 125/200 (62%), Gaps = 2/200 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K +E I+ +A +PG G R+A R LHL+K+ + LA+A+ ++ KV C Sbjct: 1 MDFSSKFLETAIEEIALLPGIGKRTALRLALHLLKQPQSQTTDLAKALVDLKTKVKQCKS 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ + C IC +Q RD S+I +VED+ D+ A+E ++ +YHVLGG +SP+D +GP Sbjct: 61 CHNISDKELCGICANQSRDHSIICIVEDIRDVMAIENTEQYKGIYHVLGGKISPMDGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMG 180 + I+SL+++I+ K+ E+IFA+S+T+EG TT YI +++ +K + +A GI +G Sbjct: 121 NQLNIESLVDKIKTGKVIEVIFALSSTMEGDTTNFYIYKQIQASKHSLKTSTIARGISIG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I R Sbjct: 181 DELEYADEITLGRSILQRVP 200 >gi|21230462|ref|NP_636379.1| recombination protein RecR [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769544|ref|YP_244306.1| recombination protein RecR [Xanthomonas campestris pv. campestris str. 8004] gi|188992752|ref|YP_001904762.1| recombination protein RecR [Xanthomonas campestris pv. campestris str. B100] gi|24212228|sp|Q8PBW4|RECR_XANCP RecName: Full=Recombination protein recR gi|81304501|sp|Q4URN7|RECR_XANC8 RecName: Full=Recombination protein recR gi|21112026|gb|AAM40303.1| recombination protein RecR [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574876|gb|AAY50286.1| recombination protein RecR [Xanthomonas campestris pv. campestris str. 8004] gi|167734512|emb|CAP52722.1| Recombination protein RecR [Xanthomonas campestris pv. campestris] Length = 197 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 115/194 (59%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 +E LI+ +PG G +SA+R H+++++ + LA A+AN KV C C + Sbjct: 2 SSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALANAVEKVGHCVQCRDF 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 ++ CAIC + RD + VVE AD A+E + +Y +L G LSPLD IGP ++G Sbjct: 62 TESEVCAICANSGRDRQQLCVVESPADRLAIEHATGYRGVYFILQGRLSPLDGIGPRELG 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ER+ ++ E+I A +AT+EG+ TAHY+ + V+ +RLA G+P+G EL+Y+ Sbjct: 122 LDRLAERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHSVRPSRLAQGMPLGGELEYV 181 Query: 187 DDGTIFEAIRSRTV 200 D GT+ A +R+ Sbjct: 182 DRGTLSHAFGTRSE 195 >gi|94264276|ref|ZP_01288070.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1] gi|94270246|ref|ZP_01291688.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1] gi|93450881|gb|EAT01896.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1] gi|93455321|gb|EAT05528.1| RecR protein:TOPRIM [delta proteobacterium MLMS-1] Length = 203 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 126/200 (63%), Gaps = 2/200 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + +E LI ++PG G +SA R LHL+++ LA ++ ++ + +CS Sbjct: 1 MNVIPPALERLIVDFGKLPGIGRKSATRLALHLLRRPALEAHGLARSLHELHQLITMCSS 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C DPC IC + RDAS++ VVE+ DL A+E++ + YH+L G+LSP+D IGP Sbjct: 61 CCAFSEEDPCEICRNPGRDASLVCVVEEPGDLLAIEKTSSYKGKYHILHGALSPMDGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMG 180 +++ I L+ERI+ +++RE++ A S+T+ G+ TA Y++D+L+ V++TRLAYGIPMG Sbjct: 121 KELKIGLLLERIKREQVREVLIATSSTVPGEATASYLIDQLRQHTTGVRLTRLAYGIPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ++ Y D+ T+ AI +R Sbjct: 181 MDIKYADELTLARAIETRQE 200 >gi|167755135|ref|ZP_02427262.1| hypothetical protein CLORAM_00639 [Clostridium ramosum DSM 1402] gi|237733439|ref|ZP_04563920.1| recombination protein recR [Mollicutes bacterium D7] gi|167705185|gb|EDS19764.1| hypothetical protein CLORAM_00639 [Clostridium ramosum DSM 1402] gi|229383474|gb|EEO33565.1| recombination protein recR [Coprobacillus sp. D7] Length = 197 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + ++L+ R+PG G +SA R H++ ++ + + A+ +I K+ C CG+ Sbjct: 3 YPQAFQDLVDCFKRLPGIGGKSAERLAYHVLSMDKKYVDEFSAAIGSIQTKIHYCKKCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D RD + I +VED D++A+E+ K + LYHVL G++S +D +D+ Sbjct: 63 ICEGEICDICQDPDRDQTTICIVEDPKDVFAMEKVKEYHGLYHVLHGAMSIMDGKTMDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I SL ER+ I+E+I A + T +G+TTA Y+ L ++ +R+A G+P+GS +DY Sbjct: 123 NIASLFERL-DDSIKEVIIATNPTRDGETTALYLAKLLSKKNINTSRIANGLPIGSNIDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +++ R + Sbjct: 182 ADELTLLKSLEGRKKI 197 >gi|293607022|ref|ZP_06689366.1| recombination protein R [Achromobacter piechaudii ATCC 43553] gi|292814619|gb|EFF73756.1| recombination protein R [Achromobacter piechaudii ATCC 43553] Length = 202 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 114/194 (58%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + + +LI+ L R+PG G RSARR HL++ Q L A+A + C+ C + Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLKHCARCNSF 67 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C C + +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++ Sbjct: 68 SEEEVCGTCSNPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELD 127 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + +I+R +++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+ Sbjct: 128 FERIIKRATDGEVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYV 187 Query: 187 DDGTIFEAIRSRTV 200 D GTI A+ R Sbjct: 188 DAGTIAWALMERKT 201 >gi|328950358|ref|YP_004367693.1| Recombination protein recR [Marinithermus hydrothermalis DSM 14884] gi|328450682|gb|AEB11583.1| Recombination protein recR [Marinithermus hydrothermalis DSM 14884] Length = 197 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 121/194 (62%), Gaps = 3/194 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L++ LAR+PG GP+SA++ L+L + + L +A+ + +V C CGN Sbjct: 3 YPNALLQLVRSLARLPGVGPKSAQKLALYLAQH-AEAAETLEQALRGVRERVRPCVRCGN 61 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D RD VI VVE DL A+E+S N +YHVLGG+L+PL+ IGPED+ Sbjct: 62 LAEAELCPVCADPGRDHGVICVVETPGDLLAIEKSGEYNGVYHVLGGALNPLEGIGPEDL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L+ER+ + ++E+I A S T+EG+ TA Y+ + LK ++ TR AYG+P+G L+Y Sbjct: 122 RVAELLERL--EGVQEVILATSMTVEGEATAGYLAELLKARGLRATRPAYGLPVGGALEY 179 Query: 186 LDDGTIFEAIRSRT 199 +D+ T+ A+ R Sbjct: 180 VDEVTLARALAHRR 193 >gi|121533382|ref|ZP_01665210.1| recombination protein RecR [Thermosinus carboxydivorans Nor1] gi|121307941|gb|EAX48855.1| recombination protein RecR [Thermosinus carboxydivorans Nor1] Length = 171 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 68/171 (39%), Positives = 110/171 (64%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 H+++ + LA+A+ + KV CS+C N+ DPC +C + RD +VI VVED Sbjct: 1 MAYHVLEMDKDEAQALAQAILDAKEKVGYCSVCFNLTDCDPCQVCQAEGRDRTVICVVED 60 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 D+ A+ER++ LYHVL G+LSPLD +GP+ + + L++R+ +RE+I A + + Sbjct: 61 PRDVEAMERTREYRGLYHVLHGALSPLDGVGPDQLRLAELLQRLRQGDVREVIMATNPNV 120 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 EG+ TA YI LK + VK+TR+A+G+P+G +L+Y D+ T+ +A+ +R L Sbjct: 121 EGEATAMYIARLLKPLGVKVTRIAHGLPVGGDLEYADEVTLAKALENRREL 171 >gi|319778423|ref|YP_004129336.1| Recombination protein RecR [Taylorella equigenitalis MCE9] gi|317108447|gb|ADU91193.1| Recombination protein RecR [Taylorella equigenitalis MCE9] Length = 198 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 115/200 (57%), Gaps = 2/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ + ++ LI+ ++ +PG G R+ARR H+++ + LA + + + C Sbjct: 1 MTQE--PEPLQALIESISGLPGIGVRTARRLAYHMLQNDREGAEYLAHNIKSALITLKHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N ++D C IC +RD + + +VE ADL +E S LY+VL G ++P+ Sbjct: 59 SKCNNFSSSDICDICSSNKRDLTTLCIVETPADLIRIEESHGYRGLYYVLMGRITPMSPK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 G + + + LIER++ I+E+I A + T EG+TTAH+I +D++ +R+A G+P G Sbjct: 119 GAQGLNFEHLIERVKESGIKEVIIATNFTTEGETTAHFIKTLFSDLDIQTSRIARGVPSG 178 Query: 181 SELDYLDDGTIFEAIRSRTV 200 SEL+Y+D TI A+ R Sbjct: 179 SELEYVDAATIAWALNDRKK 198 >gi|33595895|ref|NP_883538.1| recombination protein RecR [Bordetella parapertussis 12822] gi|33565974|emb|CAE36525.1| recombination protein RecR [Bordetella parapertussis] Length = 216 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M ++ + + LI+ L R+PG G RSARR HL++ Q L A++ + Sbjct: 15 MDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHLLQHDLQGADMLGRALSGAVQHLRH 74 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C + + CA C + +RD ++ +VE AD +E S LY+VL G ++PL+ Sbjct: 75 CARCNSFTEDEVCATCANPKRDPGLLCIVETPADQNMIESSHGYRGLYYVLMGRIAPLEG 134 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 +GP ++ Q +IER ++E+I A + T EG+TTAH++ D L +K+TRLA G+P Sbjct: 135 VGPRELDFQRVIERACDGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPA 194 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 GSEL+Y+D GTI A+ R Sbjct: 195 GSELEYVDAGTIAWALMERRS 215 >gi|116326907|ref|YP_796627.1| recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332431|ref|YP_802149.1| recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122279843|sp|Q04NX9|RECR_LEPBJ RecName: Full=Recombination protein recR gi|122285243|sp|Q056Q1|RECR_LEPBL RecName: Full=Recombination protein recR gi|116119651|gb|ABJ77694.1| Recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126120|gb|ABJ77391.1| Recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 197 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 118/197 (59%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +E ++ L+ +PG G +SA R + HL++ ++ + N NK+ C CG Sbjct: 1 MANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + T+ C IC ++RD VVE D++ +E ++ + YHVL G +SPL+ IGP+D Sbjct: 61 SYAETEICNICTSEKRDTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+ L+ERIE ++I+E++ A + T+EG TA Y+ +LK + V +TR+AYGI +G ++ Sbjct: 121 LRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIE 180 Query: 185 YLDDGTIFEAIRSRTVL 201 D T+ AIRSR L Sbjct: 181 LADQYTLGRAIRSRLQL 197 >gi|262200456|ref|YP_003271664.1| recombination protein RecR [Gordonia bronchialis DSM 43247] gi|262083803|gb|ACY19771.1| recombination protein RecR [Gordonia bronchialis DSM 43247] Length = 203 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I++LI LA+ PG GP+ A+R L+ ++ + L A+ + + V C+ CG Sbjct: 1 MYEGPIQDLIDELAKQPGLGPKGAQRIAFALLAGEKSEIDRLVAALGRVRDDVTFCAECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 NV C IC D +RDA+ I VVE+ D+ A+ER+K N YHVLGG+L PL IGP+ Sbjct: 61 NVSANRLCRICSDARRDATKICVVEEPKDVHAIERTKEFNGRYHVLGGALDPLSGIGPDQ 120 Query: 125 IGIQSLIERIEV----KKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I+ L+ R+ + E+I A EG+ TA Y++ LK + +TRLA G+PM Sbjct: 121 LRIRELLRRLANTDDGNDVTEIIVATDPNTEGEATATYLLRMLKEFPGLSVTRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +L++ D+ T+ A+ R VL Sbjct: 181 GGDLEFADELTLGRALSGRRVL 202 >gi|311108169|ref|YP_003981022.1| recombination protein RecR [Achromobacter xylosoxidans A8] gi|310762858|gb|ADP18307.1| recombination protein RecR [Achromobacter xylosoxidans A8] Length = 202 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 114/194 (58%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + + +LI+ L R+PG G RSARR HL++ Q L A+A + C+ C + Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVQDLKHCARCNSF 67 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C C++ +RD S++ +VE AD +E S LY+VL G ++PL+ IGP ++ Sbjct: 68 SEDEVCGTCVNPKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELD 127 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + +I+R ++E+I A + T EG+TTAH++ + L +++TRLA G+P GSEL+Y+ Sbjct: 128 FERVIKRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYV 187 Query: 187 DDGTIFEAIRSRTV 200 D GTI A+ R Sbjct: 188 DAGTIAWALMERKT 201 >gi|320106729|ref|YP_004182319.1| recombination protein RecR [Terriglobus saanensis SP1PR4] gi|319925250|gb|ADV82325.1| recombination protein RecR [Terriglobus saanensis SP1PR4] Length = 199 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 119/201 (59%), Gaps = 4/201 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + LI L ++PG G +SA+R H+++ + L+ A+ N+ + LCS+ Sbjct: 1 MERFAPPMSRLIDELRKLPGVGSKSAQRLAFHILRTSQTDADLLSAAILNLKATLHLCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N+ DPC C R I V+E+ ++ A+ERS+ N +YHVL G+LSP++ +GP Sbjct: 61 CNNITDVDPCTFCTSPTRSHRTICVLEEPTNIAAVERSRTYNGVYHVLHGTLSPVNGVGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI--DVKITRLAYGIPMG 180 ED+ I +L+ R+ E+I A+S T EG+ TA Y+ ++ D++++R+A G+P G Sbjct: 121 EDLRIGNLLNRLAEAD--EIILALSPTTEGEATATYLATEIHRTRRDLRVSRIATGVPAG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S+++Y D+ T+ AI +R L Sbjct: 179 SDIEYADEITLTRAIENRRDL 199 >gi|222053484|ref|YP_002535846.1| recombination protein RecR [Geobacter sp. FRC-32] gi|254790769|sp|B9LZ13|RECR_GEOSF RecName: Full=Recombination protein recR gi|221562773|gb|ACM18745.1| recombination protein RecR [Geobacter sp. FRC-32] Length = 197 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 123/196 (62%), Gaps = 2/196 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L+ L ++PG G ++A R HL+K + L LAE++ + V CS+C Sbjct: 4 FSRSLTRLLGELKKLPGVGDKTALRLAFHLLKSPDNLT-ALAESLLEVKAGVRFCSVCFG 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC +C +RD + I VVE+ D+ A+ERS+A YHVL G+LSPL+ I P D+ Sbjct: 63 ITEDDPCHLCS-TERDRTTICVVEEPQDILAMERSRAFKGRYHVLHGALSPLNGITPGDL 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R+E IRE++ A + T+EG+ TA Y+ +K + +++TRLA+GIP+GS+L++ Sbjct: 122 KIAELMKRLESGAIREVLIATNFTVEGEATALYLTRLIKPLSIRVTRLAHGIPLGSDLEF 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D T+ A+ R+ L Sbjct: 182 IDAATVQRAVEGRSEL 197 >gi|304384141|ref|ZP_07366594.1| recombination protein R [Prevotella marshii DSM 16973] gi|304334768|gb|EFM01045.1| recombination protein R [Prevotella marshii DSM 16973] Length = 204 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 126/201 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ K +E + A++PG G ++A R LHL+++ + ++A+A + +V C Sbjct: 2 MEQAYPSKLLEKAVSEFAKLPGIGRKTALRLVLHLLRRDVDEVETFSQAVARLRTEVKHC 61 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N+ D C IC+D +R+ S + VVE++ D+ A+E ++ N LYHVLGG +SP+D + Sbjct: 62 RVCHNISDEDVCPICMDNRRERSTLCVVENIQDVMAIENTQQFNGLYHVLGGVISPMDGV 121 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ER+ E+I A+S+T+EG TT Y+ KL VK++ +A GI +G Sbjct: 122 GPGDLEIDSLVERVAGGGFSEIILALSSTMEGDTTNFYLSRKLSPYGVKLSVIARGISVG 181 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y D+ T+ +I +RT L Sbjct: 182 DELEYTDEVTLGRSITNRTAL 202 >gi|295691233|ref|YP_003594926.1| recombination protein RecR [Caulobacter segnis ATCC 21756] gi|295433136|gb|ADG12308.1| recombination protein RecR [Caulobacter segnis ATCC 21756] Length = 200 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 137/195 (70%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 G EIE LI +L+++PG GPRS RRA L L+KK++ LL PLA AMA KV CS CG+ Sbjct: 5 AGPEIERLIALLSKLPGLGPRSGRRAALALLKKRDTLLAPLALAMAEAQAKVRTCSTCGS 64 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 +D TDPCA+C D RD ++ VVE+V +WA+ER + YHVLGG LS LD +GPE + Sbjct: 65 LDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHVLGGLLSALDGVGPEAL 124 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ R+ ++ E+I A+ AT++GQTTAHYI D+L +V +T LA G+P+G +LD+ Sbjct: 125 RIGELVARVGGGEVAEVILALPATVDGQTTAHYIADRLAQTNVPVTMLARGVPVGGDLDW 184 Query: 186 LDDGTIFEAIRSRTV 200 LDDGTI +A+R+R Sbjct: 185 LDDGTIAQALRARRP 199 >gi|15604303|ref|NP_220819.1| recombination protein RecR [Rickettsia prowazekii str. Madrid E] gi|3860995|emb|CAA14895.1| RECOMBINATION PROTEIN RECR (recR) [Rickettsia prowazekii] Length = 226 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 89/200 (44%), Positives = 126/200 (63%), Gaps = 3/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K +I+ LI + +++PG G RSARR L+L++ K+ L L + + K+ C Sbjct: 28 MNK---TNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKC 84 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN+DT C IC + RD S I +VE VA+L A+ERS LYHVLG +LS R Sbjct: 85 EICGNLDTKSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQ 144 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 P + + L++R V+ I+E+I A ++T+EGQTTA++I++ LK KI+RLA GIP+G Sbjct: 145 NPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIG 204 Query: 181 SELDYLDDGTIFEAIRSRTV 200 ELDYLD+GT+ AI R Sbjct: 205 GELDYLDEGTLSAAISLRQP 224 >gi|297182769|gb|ADI18923.1| recombinational DNA repair protein (recf pathway) [uncultured SAR11 cluster bacterium HF0010_09O16] Length = 203 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 128/194 (65%), Gaps = 2/194 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 EI++LIKI++++PG GP+SA+R L L+ K++L+ P+A ++ +Y V C++CG++ + Sbjct: 6 EIDDLIKIISKLPGLGPKSAKRIVLKLINNKDELVKPMANSLVQVYKNVTRCNLCGSLKS 65 Query: 69 TDP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C C + + + I VVED++D W++E S YH+LGG+++ ED+ I Sbjct: 66 NIKGCFNCANVREKFNKICVVEDISDQWSIENSNIFKGYYHILGGTIASAGNR-KEDLLI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ER+ KI E+I A+S T+EGQTTA+YI D LK +V +T+LA G+P+G + LD Sbjct: 125 NSLVERVNKDKIEEVILALSETVEGQTTAYYIRDSLKNSNVSVTKLARGMPIGYSPENLD 184 Query: 188 DGTIFEAIRSRTVL 201 DGT+ A ++R L Sbjct: 185 DGTLLSAFKNRLKL 198 >gi|198283701|ref|YP_002220022.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667448|ref|YP_002426330.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC 23270] gi|226726300|sp|B5EJE1|RECR_ACIF5 RecName: Full=Recombination protein recR gi|226737869|sp|B7JC18|RECR_ACIF2 RecName: Full=Recombination protein recR gi|198248222|gb|ACH83815.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519661|gb|ACK80247.1| recombination protein RecR [Acidithiobacillus ferrooxidans ATCC 23270] Length = 199 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 1/194 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L+ +L R+PG GPRSA+R + L+ +K L+ LA A + V C C N+ Sbjct: 5 PSMDALVALLRRLPGIGPRSAQRISYELLVRKRDLMPQLAAAFQQAHAVVRFCERCNNLS 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 CA+C + RD S++ VVE ADL A+E + + VL G LSPLD IGPE + I Sbjct: 65 EAPLCAVCRSEHRDRSILCVVESPADLRAIEDTGVFVGEFFVLMGHLSPLDGIGPEALHI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L R+ ++E+IFA + T+EG+ TA ++ + V I+R+A G+P+G EL+Y+D Sbjct: 125 DRLSARLGETDLQEVIFATNPTLEGEATAQFLAGLV-PDGVTISRIARGVPVGGELEYVD 183 Query: 188 DGTIFEAIRSRTVL 201 T+ A+ R +L Sbjct: 184 RSTLGRALHGRRLL 197 >gi|91201432|emb|CAJ74492.1| strongly similar to recombination protein RecR [Candidatus Kuenenia stuttgartiensis] Length = 215 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 116/196 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + NLI ++PG G ++A R +++K+ LA A+ ++ + +C++C N Sbjct: 18 YPQTVNNLISEFGKMPGIGQKTAERLACYVLKQPVDDAMKLAYAIRDVKKYMKICTVCFN 77 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 V PC IC + +RD+S+I VVE ADL +E++ N YH+L G +SPL+ I P+ + Sbjct: 78 VSENSPCHICSNLRRDSSIICVVEQFADLLTIEKTGKYNGHYHILQGHISPLEGIDPDLL 137 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L++R++ ++E+I A + +EG TA YI +L+ VK+TR+A G+P GS L+Y Sbjct: 138 TIGRLLQRVKDGSVKEVILATNLNMEGDITAVYIHKQLQSFGVKVTRIARGLPTGSYLEY 197 Query: 186 LDDGTIFEAIRSRTVL 201 + + +A+ R + Sbjct: 198 ANTAIVADAVSDRNEM 213 >gi|319936702|ref|ZP_08011115.1| recombination protein recR [Coprobacillus sp. 29_1] gi|319808259|gb|EFW04824.1| recombination protein recR [Coprobacillus sp. 29_1] Length = 197 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 113/196 (57%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 E L++ +PG G + A R H++ + + ++A+ + + + C CG+ Sbjct: 3 YPNSFEELVECFKMLPGIGTKGAERMVYHILAMDDDQIQRFSQALIDFKSNIQYCQRCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC+DQQRD + I VVE D++A+E+ K LYHVL G++S +D +D+ Sbjct: 63 ICEGELCEICLDQQRDQTTICVVESPKDVFAMEKLKEYRGLYHVLHGTMSIMDGKTIDDL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 IQ+L +R+ + I+E+I A + T EG+TTA ++ L ++ +R+A G+P+G LDY Sbjct: 123 NIQTLFDRL-DENIKEVIIATNPTREGETTALFLAKLLAKQNIPASRIANGLPIGGNLDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +++ R L Sbjct: 182 ADELTLLKSLEGRKKL 197 >gi|319950863|ref|ZP_08024746.1| recombination protein RecR [Dietzia cinnamea P4] gi|319435476|gb|EFV90713.1| recombination protein RecR [Dietzia cinnamea P4] Length = 268 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 120/202 (59%), Gaps = 5/202 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++NLI ++PG GP+SA+R HL++ + + + L A+ + V C +CG Sbjct: 1 MYEGPVQNLIDEFGKLPGIGPKSAQRLAFHLLQAEPESVERLRSALQAVVEGVTYCEVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V C IC D +RD ++I VVE+ D+ A+ER++ LYHVLGG+L P++ IGP + Sbjct: 61 TVAAAGRCRICSDPRRDPTLICVVEEPKDIEAIERTREFRGLYHVLGGALDPINGIGPNE 120 Query: 125 IGIQSLIERI----EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 + I L+ R+ E ++I E+I A G+ T+ Y+ L+ D+ ++RLA G+PM Sbjct: 121 LRIAGLMRRVGAEVEGEEIAEIIIATDPNTTGEATSTYLARLLRPFPDLIVSRLASGLPM 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G++L++ D+ T+ A+ R +L Sbjct: 181 GADLEFADELTLGSALSGRRIL 202 >gi|282897322|ref|ZP_06305324.1| RecR protein [Raphidiopsis brookii D9] gi|281197974|gb|EFA72868.1| RecR protein [Raphidiopsis brookii D9] Length = 179 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 70/178 (39%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Query: 24 GPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDAS 83 GP+SA+R L+++K+ E + LA+ + + +V LC +C ++ C IC + RD+ Sbjct: 2 GPKSAQRLALYILKRPESEIEALAQTLIDAKKQVGLCQVCYHLTAEPVCEICRNPHRDSQ 61 Query: 84 VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELI 143 I VV D D+ ALE+++ YHVLGG +SP+D +GPE + +Q+L+ R+ +K +E+I Sbjct: 62 TICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGMGPEQLTLQALVRRVSQQKPQEVI 121 Query: 144 FAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 AIS ++EG+TT YI LK ++TR+A+G+PMG +L+Y D+ T+ +A+ R L Sbjct: 122 MAISPSVEGETTTLYIAGLLKPF-TRVTRIAFGLPMGGDLEYADEITLAKALEGRREL 178 >gi|302380904|ref|ZP_07269366.1| recombination protein RecR [Finegoldia magna ACS-171-V-Col3] gi|302311282|gb|EFK93301.1| recombination protein RecR [Finegoldia magna ACS-171-V-Col3] Length = 202 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 123/201 (61%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K ++ LIK L+ +P G +SARR ++ + + L E++ N+ + + C Sbjct: 1 MSLYPKAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKDNIRPCPN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ C IC DQ+RD S+I VVED ++ ++E++ N YHVLGG LSP D I P Sbjct: 61 CGNLTDKKLCDICSDQKRDNSIITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180 +D+ +++L R + ++E+I A+S T G T ++I++ LK +VK++R+A G+P+G Sbjct: 121 QDLNLENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 + L+Y D+ ++++AI R + Sbjct: 181 ANLEYYDEMSLYKAILDRREI 201 >gi|68537105|ref|YP_251810.1| recombination protein RecR [Corynebacterium jeikeium K411] gi|260579450|ref|ZP_05847331.1| recombination protein RecR [Corynebacterium jeikeium ATCC 43734] gi|123650055|sp|Q4JSL5|RECR_CORJK RecName: Full=Recombination protein recR gi|68264704|emb|CAI38192.1| recombination protein [Corynebacterium jeikeium K411] gi|258602420|gb|EEW15716.1| recombination protein RecR [Corynebacterium jeikeium ATCC 43734] Length = 250 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 53/250 (21%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + ++++I +R+PG GP+SA+R LHL+ ++ + + A+ + V C IC Sbjct: 1 MFEGPLQDVIDEFSRLPGIGPKSAQRIALHLLNEEPEDIERFQSALGRLQRGVTFCRICH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ D C IC D RD S+I VVE+ D+ +ER+ YHVLGG+L PL+ IGP++ Sbjct: 61 NISQEDVCRICADSNRDKSIICVVEESKDIQVIERTAEYRGRYHVLGGALDPLNGIGPKE 120 Query: 125 IGIQSLIERI-------------------------------------------------- 134 + + L++RI Sbjct: 121 LNVTPLVQRIGGALPDVALGAKGGGASLGDADTPADGESSGADAAETGNAKTAAVETDVE 180 Query: 135 --EVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDGTI 191 E +I E+I A EG+ TA Y+ L+ + +TRLA GIPMG +L+++D+ T+ Sbjct: 181 YDEAPEITEVIIATDPNTEGEATASYLGRLLRDFPGLTVTRLASGIPMGGDLEFVDELTL 240 Query: 192 FEAIRSRTVL 201 A RT L Sbjct: 241 SRAFAGRTAL 250 >gi|255021194|ref|ZP_05293244.1| Recombination protein RecR [Acidithiobacillus caldus ATCC 51756] gi|254969309|gb|EET26821.1| Recombination protein RecR [Acidithiobacillus caldus ATCC 51756] Length = 199 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 114/195 (58%), Gaps = 1/195 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 L ++L R+PG GPRS++R L+ +K +L+ LA A+ + + CS C N+ Sbjct: 4 SPSFTALTRLLRRLPGVGPRSSQRIAYDLLMRKRELMPALAMALQAAHEHIRSCSRCNNL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + CAIC D QR ++ VVE DL A+E S A Y VL G LSPLD IGPED+ Sbjct: 64 CEAELCAICSDTQRQRELLCVVESPVDLAAIEESGAYGGDYFVLMGHLSPLDGIGPEDLH 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 I R+ +RE+IFA ++T+EG+ TA ++ + V+ +R+A GIPMG EL+Y+ Sbjct: 124 IDRFTARLAEPGLREVIFATNSTLEGEATAQFLAGYV-PAGVRSSRIARGIPMGGELEYV 182 Query: 187 DDGTIFEAIRSRTVL 201 D GT+ A+ R L Sbjct: 183 DRGTLGRALLGRRDL 197 >gi|167626338|ref|YP_001676838.1| recombination protein RecR [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189029363|sp|B0TY95|RECR_FRAP2 RecName: Full=Recombination protein recR gi|167596339|gb|ABZ86337.1| recombination protein RecR [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 201 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +I +I +I+ L ++P G +S++R L+L+ K + +A ++ + + C Sbjct: 1 MNNQIFSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C ++ D C IC Q RD S + ++E + DL A+E + Y VL G +SPLD I Sbjct: 61 KYCQSLTEKDVCDICGSQNRDESKLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP ++ + L + I ++I E+I AIS T+EG+TTAH+I + G D+KI+R+ +G+P G Sbjct: 121 GPNELKLDILEQIIINREINEIILAISPTVEGETTAHFISQMI-GKDIKISRIGFGVPFG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+YLD T+ A +RT + Sbjct: 180 GELEYLDQQTLIHAFNARTNI 200 >gi|323345662|ref|ZP_08085885.1| recombination protein R [Prevotella oralis ATCC 33269] gi|323093776|gb|EFZ36354.1| recombination protein R [Prevotella oralis ATCC 33269] Length = 203 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 125/200 (62%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M ++ +E + +++PG G ++A R LHL+++ + + + A+ + + C Sbjct: 1 MDQQYPSALLEKAVNEFSKLPGIGRKTALRLVLHLLRRSNEDVETFSTAITTMKQHIKYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C N+ TD C+IC D RDAS I VVE++ D+ A+E ++ LYHVLGG +SP+D I Sbjct: 61 NVCHNISDTDVCSICSDSHRDASTICVVENIQDVMAVENTQQFRGLYHVLGGIISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ER+ I E+I A+S+T+EG TT YI KL+ VK++ +A GI +G Sbjct: 121 GPNDLEINSLVERVMQGGIDEIILALSSTMEGDTTNFYISRKLQSFPVKLSVIARGISVG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 181 DELEYTDEVTLGRSILNRTP 200 >gi|307151592|ref|YP_003886976.1| recombination protein RecR [Cyanothece sp. PCC 7822] gi|306981820|gb|ADN13701.1| recombination protein RecR [Cyanothece sp. PCC 7822] Length = 185 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 73/185 (39%), Positives = 121/185 (65%), Gaps = 1/185 (0%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76 + R+PG GP++A+R LH++K+ E+ + LA+A+ +V LC +C ++ C IC Sbjct: 1 MQRLPGVGPKTAQRLALHILKRPEEEVNTLAKAIIEAKKQVGLCQVCFHLSAESVCEICR 60 Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136 + R+ ++I VV D D+ ALE+++ YHVLGG +SP+D IGPE + I +L+ R+ Sbjct: 61 NPNRNNNIICVVADSRDVIALEKTREYGGKYHVLGGVISPMDGIGPEQLNISALVRRVSQ 120 Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196 +K++E+I AIS ++EG+TT Y+ LK + +TR+A+G+PMG +L+Y D+ T+ A+ Sbjct: 121 QKVQEVILAISPSVEGETTTLYVGQLLKPFTL-VTRIAFGLPMGGDLEYADEVTLARALE 179 Query: 197 SRTVL 201 R L Sbjct: 180 GRREL 184 >gi|55981569|ref|YP_144866.1| recombination protein RecR [Thermus thermophilus HB8] gi|73621526|sp|Q5SHY0|RECR_THET8 RecName: Full=Recombination protein recR gi|55772982|dbj|BAD71423.1| RecR protein [Thermus thermophilus HB8] Length = 194 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 78/195 (40%), Positives = 120/195 (61%), Gaps = 4/195 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L + L+R+PG GP++A+R LHL KE+ +V C CGN Sbjct: 3 YPESLLKLTRALSRLPGIGPKTAQRLALHLAFHKEEAEALAEA--LEGIKRVRACRECGN 60 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D+ RD S++ VVE VADL+ALERS LYHVLGG+L+PL+ IGP+++ Sbjct: 61 LAEGELCPICQDEDRDRSLLAVVESVADLYALERSGEFRGLYHVLGGALNPLEGIGPKEL 120 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L R+ + + E++ A S T+EG+ TA Y+ ++LK V++TR AYG+P+G L+Y Sbjct: 121 NLEGLFRRL--EGVEEVVLATSMTVEGEATALYLAEELKKRGVRVTRPAYGLPVGGSLEY 178 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 179 ADEVTLGRALEGRRP 193 >gi|283780298|ref|YP_003371053.1| recombination protein RecR [Pirellula staleyi DSM 6068] gi|283438751|gb|ADB17193.1| recombination protein RecR [Pirellula staleyi DSM 6068] Length = 199 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 2/200 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + + +I+ +++PG G +SA R H+++ + LA+A+ + V C Sbjct: 1 MAQ--VTQSLATVIEEFSKLPGIGRKSAERLAYHILRVHKSEALALADAIRAVRESVQYC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C N+ C IC D +RD +++ +VE DL ALE++ LYHVL G ++PLD + Sbjct: 59 STCYNLAEGPTCTICSDDRRDKTLLCIVEQPRDLMALEQAGIFKGLYHVLLGRIAPLDGV 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP+ + I L+ER+ RE+I A + T+EG TA YI + L V+ITRLA GI G Sbjct: 119 GPDQLTIDPLVERVRSGTFREIIMATNPTVEGDGTALYISNLLAEYPVQITRLARGITTG 178 Query: 181 SELDYLDDGTIFEAIRSRTV 200 S L+Y + + +A+ R Sbjct: 179 SILEYTNKEILADALSLRQK 198 >gi|313622075|gb|EFR92664.1| recombination protein RecR [Listeria innocua FSL J1-023] Length = 172 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 108/170 (63%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 +++ KE + A+A+ + + CS+CG++ DPC IC D RD SV+ VV++ Sbjct: 2 LAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICSDTSRDRSVLCVVQE 61 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 D+ A+E+ + + LYHVL G++SP+D IGPEDI I L++R++ I E+I A + + Sbjct: 62 SKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNV 121 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 EG+ TA YI L+ +K+TR+A+G+P+G +L+Y D+ T+ +A+ R Sbjct: 122 EGEATAMYISRLLRPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRRE 171 >gi|121604577|ref|YP_981906.1| recombination protein RecR [Polaromonas naphthalenivorans CJ2] gi|171769290|sp|A1VMV7|RECR_POLNA RecName: Full=Recombination protein recR gi|120593546|gb|ABM36985.1| DNA replication and repair protein RecR [Polaromonas naphthalenivorans CJ2] Length = 208 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 12/205 (5%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 ++ L + L ++PG G +SA R HL++ + +A A+ + + C++C + Sbjct: 4 SNALDGLTQALRKLPGVGAKSAARMAFHLLQHDKPGALQIARALEHAVQSIRHCALCNTL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C C + QRD S + VVE AD ALER+ A LY VL G LSPLD +GP DIG Sbjct: 64 TEQEVCVTCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGVGPNDIG 123 Query: 127 IQSLIERIEV------------KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174 +Q L +R ++++E+I A + T EG+ TAH I LK +++TRLA Sbjct: 124 LQKLFDRAVPKDEHGQPLPAASREVQEVILATNFTAEGEATAHVIAQALKSRGMQVTRLA 183 Query: 175 YGIPMGSELDYLDDGTIFEAIRSRT 199 G+P+GSEL+Y+D GTI A+ R Sbjct: 184 RGVPVGSELEYVDLGTIAHALTDRR 208 >gi|262037122|ref|ZP_06010615.1| recombination protein RecR [Leptotrichia goodfellowii F0264] gi|261748853|gb|EEY36199.1| recombination protein RecR [Leptotrichia goodfellowii F0264] Length = 195 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 125/193 (64%), Gaps = 1/193 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K +++L+ + A++PG G +SA R +++K E+ + + + + Y+ + CS+CGN+ Sbjct: 2 KRLDDLVNVFAKLPGIGRKSAMRIAFDILEKDEKEIDDILYTIKDSYDNIKHCSVCGNLS 61 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C ICID++R+ +VI VVE V D+ A E+S+ N LYHVLGG + PL+ + +D+ I Sbjct: 62 EKDVCEICIDEKRNKNVICVVEGVRDIIAFEKSETYNGLYHVLGGKIDPLNGVTIDDLNI 121 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L+ER+ + E+I A++ +EG+TT Y+ LKG ++KI+++A GIPMG ++Y D Sbjct: 122 EKLMERL-DGTVSEIILALNPDLEGETTNLYLTKILKGKNIKISKIASGIPMGGNIEYTD 180 Query: 188 DGTIFEAIRSRTV 200 T+ +++ R Sbjct: 181 MATLGKSLEGRVE 193 >gi|149924603|ref|ZP_01912958.1| recombination protein RecR [Plesiocystis pacifica SIR-1] gi|149814528|gb|EDM74113.1| recombination protein RecR [Plesiocystis pacifica SIR-1] Length = 205 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 15/201 (7%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 +LAR+PG G +SA R L +V+ + L++A+++++ + LCS+C ++ +T C IC Sbjct: 4 LLARLPGIGEKSALRLALAIVRSNDDYCRALSQAISDVHQHMRLCSVCCDLTSTPVCEIC 63 Query: 76 IDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIE 135 D +RDA +I VV D A ER+ YHVL G L PL +GP ++ + SL+ R++ Sbjct: 64 SDPRRDAGLICVVSQPQDRMAFERAGVFRGRYHVLHGVLDPLAGVGPNELKVASLLARLQ 123 Query: 136 VKKIR---------------ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 K+ E+I A S +EG TA Y+ L+ + V +TR+A G+ +G Sbjct: 124 PKEGEPKEGEPKEREKSPVREVIVATSPNVEGDATALYLAKLLEPLGVSVTRIASGVAVG 183 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y D T+ A+ R + Sbjct: 184 GELEYADMTTLHRALEDRRSI 204 >gi|46199538|ref|YP_005205.1| recombination protein recR [Thermus thermophilus HB27] gi|73621525|sp|Q72I96|RECR_THET2 RecName: Full=Recombination protein recR gi|46197164|gb|AAS81578.1| recombination protein recR [Thermus thermophilus HB27] Length = 194 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 78/195 (40%), Positives = 120/195 (61%), Gaps = 4/195 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L + L+R+PG GP++A+R LHL KE+ +V C CGN Sbjct: 3 YPESLLKLTRALSRLPGIGPKTAQRLALHLAFHKEEAEALAEA--LEGLKRVRACRECGN 60 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D+ RD S++ VVE VADL+ALERS LYHVLGG+L+PL+ IGP+++ Sbjct: 61 LAEGELCPICQDEDRDRSLLAVVESVADLYALERSGEFRGLYHVLGGALNPLEGIGPKEL 120 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++ L R+ + + E++ A S T+EG+ TA Y+ ++LK V++TR AYG+P+G L+Y Sbjct: 121 NLEGLFRRL--EGVEEVVLATSMTVEGEATALYLAEELKKRGVRVTRPAYGLPVGGSLEY 178 Query: 186 LDDGTIFEAIRSRTV 200 D+ T+ A+ R Sbjct: 179 ADEVTLGRALEGRRP 193 >gi|297569217|ref|YP_003690561.1| recombination protein RecR [Desulfurivibrio alkaliphilus AHT2] gi|296925132|gb|ADH85942.1| recombination protein RecR [Desulfurivibrio alkaliphilus AHT2] Length = 200 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + LI R+PG G ++A R +HL+++ LA+++ ++ + +CS Sbjct: 1 MNVIPPALARLIADFGRLPGVGRKTASRLAMHLLRRPAVEAQALAKSLTELHQLITMCST 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C DPC IC + R+ ++ VVE+ ADL A+E++ + YH+L G LSP D IGP Sbjct: 61 CCAFSEADPCEICCNPDREQGLVCVVEEPADLVAIEKTASFKGKYHILHGVLSPADGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGS 181 ++ I L+ERI ++ E++ A S+T+ G+ TA Y++ L + V+ITRLA GIPMG Sbjct: 121 GELKIDRLLERIRRDQVNEVLIATSSTVPGEATAAYLIRHLQENSKVRITRLACGIPMGM 180 Query: 182 ELDYLDDGTIFEAIRSRTV 200 ++ Y D+ T+ AI SR Sbjct: 181 DIKYADELTLSRAIASRQQ 199 >gi|212550851|ref|YP_002309168.1| recombination protein RecR [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549089|dbj|BAG83757.1| recombination protein RecR [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 209 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 126/198 (63%), Gaps = 1/198 (0%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 +K +EN I A++PG G ++A R H +K+ + + A+ + N++ C Sbjct: 1 MEKYPSFLLENAINEFAKLPGIGRKTALRLVFHSLKRTTKEVENFGRAIIALRNEINYCK 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C N+ + C IC + RD S+I VVE++ ++ A+E +K + LYHVLGG +SP++ IG Sbjct: 61 VCYNICDNEICDICSNTSRDISLICVVENIKEVMAIENTKQFHGLYHVLGGVISPMEGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMG 180 P D+ I+SLIER++ K+RE+I A+S T+EG TT YI K+ I+ VKI+ LA G+ +G Sbjct: 121 PGDLQIKSLIERVKNGKVREIILALSTTMEGDTTNFYIYRKISNINSVKISTLARGVSIG 180 Query: 181 SELDYLDDGTIFEAIRSR 198 E++Y D+ T+ ++I +R Sbjct: 181 DEIEYTDEITLGKSILNR 198 >gi|258545553|ref|ZP_05705787.1| recombination protein RecR [Cardiobacterium hominis ATCC 15826] gi|258519253|gb|EEV88112.1| recombination protein RecR [Cardiobacterium hominis ATCC 15826] Length = 201 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 114/195 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L++ L +PG G ++A+R L L+ + Q LA+A+ + + C C N Sbjct: 3 FSPSFDQLVQALTCLPGVGNKTAQRMALRLLLDQPQKAKQLADAIDHALHTAQRCHKCRN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C IC + +RDAS + VVE AD+ A+E+S Y VL G +SPLD IGP ++ Sbjct: 63 ISDADLCLICANPKRDASTLCVVEAPADVLAIEQSTDYRGQYFVLMGHISPLDGIGPIEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L ++ I+EL+ A ++T+EG+TTA+++ + +V TRLA+G+PMG EL Y Sbjct: 123 GMDILDRQLATGDIKELVLATNSTLEGETTAYFLAELAAKHNVPATRLAHGVPMGGELAY 182 Query: 186 LDDGTIFEAIRSRTV 200 +D T+ A +R+ Sbjct: 183 IDKSTLSLAFNTRSP 197 >gi|169824211|ref|YP_001691822.1| recombination protein [Finegoldia magna ATCC 29328] gi|297587502|ref|ZP_06946146.1| recombination protein R [Finegoldia magna ATCC 53516] gi|303234906|ref|ZP_07321531.1| recombination protein RecR [Finegoldia magna BVS033A4] gi|226739005|sp|B0S0K8|RECR_FINM2 RecName: Full=Recombination protein recR gi|167831016|dbj|BAG07932.1| recombination protein [Finegoldia magna ATCC 29328] gi|297574191|gb|EFH92911.1| recombination protein R [Finegoldia magna ATCC 53516] gi|302494024|gb|EFL53805.1| recombination protein RecR [Finegoldia magna BVS033A4] Length = 202 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 123/201 (61%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + K ++ LIK L+ +P G +SARR ++ + + L E++ N+ + C+ Sbjct: 1 MSLYPKAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKTNIRPCAN 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ C IC DQ+RD SVI VVED ++ ++E++ N YHVLGG LSP D I P Sbjct: 61 CGNLTDKKLCDICSDQKRDNSVITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180 +D+ +++L R + ++E+I A+S T G T ++I++ LK +VK++R+A G+P+G Sbjct: 121 QDLNLENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 + L+Y D+ ++++AI R + Sbjct: 181 ANLEYYDEMSLYKAILDRREI 201 >gi|163784538|ref|ZP_02179397.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1] gi|159880193|gb|EDP73838.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1] Length = 199 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K++ ++N I+ ++ +PG+G +SA+R +L+K + +++ + K+ C Sbjct: 1 MEKQVLPSALQNAIEHISNLPGYGEKSAQRFVENLLKLPKGESIETIKSLLELLEKIHPC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICG + + C+IC ++R+ + I VVE+ D +A+E++ LYHVL G LSPL+ I Sbjct: 61 KICGLLTENEICSICSSEERNKTTICVVEESFDAFAIEKTGKYTGLYHVLHGKLSPLEGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 ED+ I SL++R+ + ++E+I A + T+EG+ TA YI + LK +V+I+R+AYG+P G Sbjct: 121 TAEDLNISSLLDRL--EGVKEIIIATNPTVEGEATATYIYNLLKNKNVEISRIAYGLPFG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 + L+ D T+ +A+ + L Sbjct: 179 ATLENADVFTLSKALEGKQKL 199 >gi|255994276|ref|ZP_05427411.1| recombination protein RecR [Eubacterium saphenum ATCC 49989] gi|255993944|gb|EEU04033.1| recombination protein RecR [Eubacterium saphenum ATCC 49989] Length = 198 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 113/192 (58%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 ENLI L+R+PG G ++A+R + + ++ ++ A+ N + C CG + Sbjct: 7 FENLITELSRLPGIGRKTAQRLAIFITDMEDNKALSISRAIEEAVNNLKPCDTCGCLTDN 66 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 C C D R+ VI VVE+ D+ A+E+ K YHVLGG +SPLD IGP+ + I + Sbjct: 67 GKCLFCSDPLRNDDVICVVENTIDIVAMEKLKNYRGRYHVLGGVISPLDGIGPDHLRIDT 126 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ R+ ++E+I A S TIEG+ TA+YI +L+ + +K TR+A GIP+G + DY+D Sbjct: 127 LLSRVVKYDVKEVILATSVTIEGEATANYIAKELEKLGIKATRIAKGIPVGGKFDYIDAM 186 Query: 190 TIFEAIRSRTVL 201 T+ AI R + Sbjct: 187 TMQNAIDKREEM 198 >gi|291515277|emb|CBK64487.1| DNA replication and repair protein RecR [Alistipes shahii WAL 8301] Length = 198 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 K +++++ L+++PG G R+A R +H+++ + + + E++ N++ CS C N+ Sbjct: 2 SKLLQDVVGELSKLPGVGRRTALRLAIHILRMERDSVAEMTESIDRFRNEIRYCSQCNNL 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC D++RD + I VVE VAD+ ++E ++ +YHVLGG +SP+ I P D+ Sbjct: 62 SDEEVCPICADRERDHATICVVEQVADVLSVENTRQYRGMYHVLGGVISPMQGISPSDLK 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDY 185 I L ERI ++E+I AIS ++EG+TT Y+M++L+ +K+T +A GI G EL+Y Sbjct: 122 IDLLCERIARGGVKEVILAISTSVEGETTLFYLMNRLRQFPGLKVTSIARGIGFGDELEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ TI A+ +R + Sbjct: 182 VDELTITHALMNRREI 197 >gi|32474297|ref|NP_867291.1| recombinant protein RecR [Rhodopirellula baltica SH 1] gi|73621509|sp|Q7UQ68|RECR_RHOBA RecName: Full=Recombination protein recR gi|32444835|emb|CAD74837.1| recombinant protein RecR [Rhodopirellula baltica SH 1] gi|327539585|gb|EGF26194.1| recombination protein RecR [Rhodopirellula baltica WH47] Length = 199 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 113/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + +L+ L+++PG G +SA R HL++ E LA A+ + V CS+C N+ Sbjct: 7 AVSDLVDQLSKLPGIGRKSAERLAFHLLRVHEDEALALASAIRRVRTDVRYCSVCYNLSE 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 T+ C IC D +RDA+ + VVE DL +L+ S + LYHVL G ++PLD I P+ + I Sbjct: 67 TELCRICSDPKRDATRLCVVEQPRDLLSLDASGVYSGLYHVLLGRIAPLDGITPDQLTID 126 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 SL+ER+ E+I A + T+EG T+ Y+ + ++ V+ITRLA GI GS L+Y + Sbjct: 127 SLVERVRTGNFSEIIMATNPTVEGDGTSLYLSNLMQEFPVEITRLARGITSGSVLEYANR 186 Query: 189 GTIFEAIRSRTVL 201 I +A+ R L Sbjct: 187 EIIADALTGRQRL 199 >gi|87307571|ref|ZP_01089715.1| recombinant protein RecR [Blastopirellula marina DSM 3645] gi|87289741|gb|EAQ81631.1| recombinant protein RecR [Blastopirellula marina DSM 3645] Length = 199 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 113/196 (57%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L+ A++PG G +SA R H+++ E LA+++ + V CS C N Sbjct: 4 TTDSVTRLVDEFAKLPGIGRKSAERLAYHILRVHESEALALADSIRTVKQNVRYCSQCFN 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + ++ C +C D +RD +++ +VE DL ALE+S LYHVL G ++PL+ IGP+ + Sbjct: 64 LAESELCTVCQDTRRDQTLLCIVEQPRDLMALEQSGMFPGLYHVLLGRIAPLEGIGPDQL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I +L++R+ K RE+I A + T EG TA +I + L + V +TRLA GI GS L++ Sbjct: 124 TIDALVDRVRAGKFREIIMATNPTTEGDGTALHISNLLAELPVTLTRLARGITSGSVLEF 183 Query: 186 LDDGTIFEAIRSRTVL 201 + + +A+ R L Sbjct: 184 TNKEILADALSGRQKL 199 >gi|296116790|ref|ZP_06835396.1| recombination protein RecR [Gluconacetobacter hansenii ATCC 23769] gi|295976591|gb|EFG83363.1| recombination protein RecR [Gluconacetobacter hansenii ATCC 23769] Length = 198 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 92/196 (46%), Positives = 130/196 (66%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE LI +L R+PGFGPRSARRA L ++++ + + PLA AM V CS CG Sbjct: 2 MGGAEIERLITLLGRLPGFGPRSARRAALAMLRQPQTRMLPLAHAMEQAARAVRTCSSCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT DPC+IC D RD ++ VVE+V DLWALER+ +Y VLGG+LS LD +GP+D Sbjct: 62 NLDTCDPCSICADPARDHGLVCVVENVGDLWALERACVHRGVYQVLGGTLSALDGVGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + L R+E +RE+I A+ T++G TT H++ D L ++ I+R+ G+P+G LD Sbjct: 122 LNVAPLYARLEAGGVREVILALGTTVDGATTMHWLHDSLLRFNIPISRVGQGVPVGGALD 181 Query: 185 YLDDGTIFEAIRSRTV 200 LDDGT+ A+ +R Sbjct: 182 VLDDGTLAAALMARRP 197 >gi|313159174|gb|EFR58547.1| recombination protein RecR [Alistipes sp. HGB5] Length = 198 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 123/195 (63%), Gaps = 1/195 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 K +++++ L+++PG G R+A R +H+++ + + + + E++ N V C+ C N+ Sbjct: 2 SKLLQDVVGELSKLPGVGRRTALRLAIHILRMERESVAEMTESIDRFRNDVKYCAECNNL 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC+D +RD + I VVE VAD+ ++E + LYHVLGG +SP+ I P D+ Sbjct: 62 SDEEVCPICLDDERDRTTICVVEQVADVLSIENTHQYKGLYHVLGGVISPMQGISPSDLK 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDY 185 I L ERI ++E+I AIS ++EG+TT Y+M++L+ VK+T +A GI G EL+Y Sbjct: 122 IDLLTERIARGGVKEVILAISTSVEGETTLFYLMNRLRQFPGVKVTSIARGIGFGDELEY 181 Query: 186 LDDGTIFEAIRSRTV 200 +D+ TI A+R+R Sbjct: 182 VDELTITHALRNRRE 196 >gi|325280372|ref|YP_004252914.1| Recombination protein recR [Odoribacter splanchnicus DSM 20712] gi|324312181|gb|ADY32734.1| Recombination protein recR [Odoribacter splanchnicus DSM 20712] Length = 203 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 125/196 (63%), Gaps = 1/196 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + ++ + A +PG G ++A + LHL+KK Q + +++ ++ + C C N Sbjct: 3 SSRLLDKAVDQFASLPGVGRKTALKFVLHLLKKDVQEVDDFLKSIGDLKKNIKECRRCHN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D +RD + + VVE++ D+ ++E + N LYHVLGG +SP+D IGP D+ Sbjct: 63 ISDGEICEICSDPKRDNTTLCVVENIKDILSIEATSQYNGLYHVLGGIISPMDGIGPADL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELD 184 I SL+ER+E + IRE+IFA+SATIEG TT +YI K+K D+ I+ +A GI +G++L+ Sbjct: 123 HITSLVERVEQEPIREIIFALSATIEGDTTGYYIFKKMKNKEDLVISTIAKGISIGNDLE 182 Query: 185 YLDDGTIFEAIRSRTV 200 Y D+ T+ +I +R Sbjct: 183 YTDELTLGRSIVNRVK 198 >gi|187251872|ref|YP_001876354.1| recombinational DNA repair protein [Elusimicrobium minutum Pei191] gi|186972032|gb|ACC99017.1| Recombinational DNA repair protein [Elusimicrobium minutum Pei191] Length = 197 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 119/196 (60%), Gaps = 2/196 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K + L++ L R+PG GPR A R + + +K + + A++ + + LCSIC Sbjct: 2 KSFDRLVRALRRLPGVGPRQAERFSAYFLKTSDSEIDEFINALSALRENIHLCSICFAYS 61 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C IC D R+ +I VVED D+ A+E++ A LYHVL G+LSP+D G E+I I Sbjct: 62 EDGVCDICEDSSRERDIICVVEDPQDIEAIEKTGAFKGLYHVLHGALSPIDGRGVENIKI 121 Query: 128 QSLIERIEVKKI--RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + LIERI + RE+I A EG+TTA YI D L+G+ K++R+ YG+P+G +LDY Sbjct: 122 RELIERIHNSQTPVREVIIATDPDTEGETTALYIADALRGLVDKVSRIGYGVPLGGDLDY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LD+ T+ +++ RT L Sbjct: 182 LDEMTLTYSLKGRTKL 197 >gi|149179095|ref|ZP_01857667.1| recombinant protein RecR [Planctomyces maris DSM 8797] gi|148842086|gb|EDL56477.1| recombinant protein RecR [Planctomyces maris DSM 8797] Length = 192 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 111/188 (59%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 LI A +PG G +SA R +++ E LA+A+ + V CS+C N+ + Sbjct: 3 QLIDQFATLPGIGRKSAERLAHYILSIPEPEARQLADAINAVKQSVRPCSVCYNLTEQEV 62 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D +RD ++ VVE D+ +LE + + +YHVL G +SPL+ IGPE++ I +LI Sbjct: 63 CTICSDSRRDKKLVCVVESPRDVVSLEATSSFQGVYHVLQGRISPLEGIGPENLTINALI 122 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 R++ + E+I A + T+EG TA YI + L+ +V+ITRLA GI GS L++ + + Sbjct: 123 RRVKQDGVTEMIMATNPTLEGDGTALYISNLLEHENVEITRLARGIASGSVLEFANKEML 182 Query: 192 FEAIRSRT 199 +A++ R Sbjct: 183 SDALQGRQ 190 >gi|269792613|ref|YP_003317517.1| recombination protein RecR [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100248|gb|ACZ19235.1| recombination protein RecR [Thermanaerovibrio acidaminovorans DSM 6589] Length = 200 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 107/194 (55%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ LI+ L R+PG G + ARR ++ + + + L+ A+ V CS+CG + Sbjct: 7 PSVDGLIEKLKRLPGVGEKGARRFAFFILGQPKDWVEDLSRAIREARWSVRPCSVCGGLA 66 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC D RD VI VVE D A+ER + N YHVLGG SPLD + Sbjct: 67 EGDLCPICSDPARDREVICVVESQEDCVAMERHRIFNGRYHVLGGRYSPLDGEDIPSEAL 126 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL +R+E ++E+I A++ ++EG+ TA + + L + VK++RL+ G+P+G + + D Sbjct: 127 ASLRDRVERGGVQEVILALAPSVEGELTALAVKEALDDLPVKVSRLSSGLPVGGSIGFAD 186 Query: 188 DGTIFEAIRSRTVL 201 T+ A+ R + Sbjct: 187 SATLKLALEGRRGM 200 >gi|291278576|ref|YP_003495411.1| DNA recombination protein RecR [Deferribacter desulfuricans SSM1] gi|290753278|dbj|BAI79655.1| DNA recombination protein RecR [Deferribacter desulfuricans SSM1] Length = 199 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 113/193 (58%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + E + L+++PG G ++A R LHL+K + + L ++ + + C CG++ Sbjct: 6 DFERCVFELSKLPGIGKKTATRLALHLLKMTNKDVESLVNSINKLKTNIKFCKECGSLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C +C+D+ RD I VVE+ D+ +E S LYHVLGG ++PLD I P+ + + Sbjct: 66 KDICYVCLDEGRDRKTICVVEEAKDVIIIENSGIYKGLYHVLGGRIAPLDGITPDMLSFE 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L+ R+ + E+I A + ++G+TTA+Y+ L D++ITR+A G+ +G+ ++Y D+ Sbjct: 126 KLLNRVGDLGVTEVIIATNPDVDGETTAYYLKKLLADYDIRITRIASGLAVGTHIEYSDE 185 Query: 189 GTIFEAIRSRTVL 201 I +A+ +R L Sbjct: 186 FAILKALENRVEL 198 >gi|325111243|ref|YP_004272311.1| DNA replication and repair protein RecR [Planctomyces brasiliensis DSM 5305] gi|324971511|gb|ADY62289.1| DNA replication and repair protein RecR [Planctomyces brasiliensis DSM 5305] Length = 203 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 2/202 (0%) Query: 1 MQKKI--TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 M+++ G + L+ A +PG G +SA R ++V K+ L +A+ + + Sbjct: 1 MEQQSHPYGPSVARLVDEFAEMPGIGRKSAERLAQYVVNLKKPAAARLIQAIDAVKRSIR 60 Query: 59 LCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118 C +C + + C IC D +R++S++ VVE D+ +LE S YHVL G LSPL+ Sbjct: 61 RCDVCHTLTEAETCEICSDPRRESSLVCVVEQPRDVISLEASGVFQGKYHVLHGCLSPLN 120 Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 IGPE + + SL++R+ + E++ A + T+EG TA +I + L +V+ITRLA GI Sbjct: 121 GIGPEQLTLDSLVKRVREHGVTEIVMATNPTLEGDGTALFISNLLADDNVRITRLARGIA 180 Query: 179 MGSELDYLDDGTIFEAIRSRTV 200 GS L++ + + +A+R R Sbjct: 181 SGSVLEFANKEMLADALRGRQS 202 >gi|312880093|ref|ZP_07739893.1| recombination protein RecR [Aminomonas paucivorans DSM 12260] gi|310783384|gb|EFQ23782.1| recombination protein RecR [Aminomonas paucivorans DSM 12260] Length = 203 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 103/193 (53%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ LI+ PG G +SARR L+++ + LAE + + C ICG + Sbjct: 5 PYLDQLIERFRAFPGVGEKSARRMAFFLLQQPTPWVESLAEILRGAREHIHPCPICGALT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC +C D R + ++ VVE D ALE+S YHVLGG +SPL+ + Sbjct: 65 DRDPCPLCSDPGRRSELLCVVETPEDCIALEQSGVFRGRYHVLGGRVSPLEGEQIPPERL 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 +L +RI+ I E+I A++ +EG TA + + L G+ VK++RLA G+P+G + + D Sbjct: 125 DALRQRIQDGGIGEVILAMNPRVEGDLTAFTVQESLAGLPVKLSRLACGLPVGGSIGFAD 184 Query: 188 DGTIFEAIRSRTV 200 T+ A+ +R Sbjct: 185 RVTLHVAMEARQP 197 >gi|282890065|ref|ZP_06298598.1| hypothetical protein pah_c010o058 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500071|gb|EFB42357.1| hypothetical protein pah_c010o058 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 200 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 3/198 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + I LI++L ++PG G RSA R L++ E+ L ++ + K+ CS Sbjct: 1 MRYPSHLI-KLIQVLKKLPGVGARSAERFAFQLMEWDEEKLREFGTILSQVPEKIQACSA 59 Query: 63 CGNVDTTDP-CAICIDQQRDASVI-IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + C C D R AS I V+ D++++E ++ LYHVLGG LSPLD Sbjct: 60 CGCLKEEAGGCPFCDDLVRQASQILCVISSPRDVFSIEETREYKGLYHVLGGLLSPLDGF 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + + SL RIE+ +I E++ A+ +T+EG TA YI +L + V+++RLAYG+P+G Sbjct: 120 GPERLSLASLKGRIEIHQIHEVVIALGSTLEGDATALYIKRELGTLPVQVSRLAYGLPVG 179 Query: 181 SELDYLDDGTIFEAIRSR 198 S LDY+D GT+ A R Sbjct: 180 SSLDYVDGGTLARAFSGR 197 >gi|297565807|ref|YP_003684779.1| recombination protein RecR [Meiothermus silvanus DSM 9946] gi|296850256|gb|ADH63271.1| recombination protein RecR [Meiothermus silvanus DSM 9946] Length = 205 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 9/201 (4%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L++ LA +PG GP++A++ L+LV +K+ LA + + C ICGN Sbjct: 3 YPERLLKLVRALAVLPGVGPKTAQKLGLYLVMQKDAAQELLAA--LDAAQALHPCPICGN 60 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D+ R+ +++ VVE V DL A+ERS + LYHVLGG+L+PL+ IGPE + Sbjct: 61 LAEDELCPICADEHRERNLVCVVESVGDLMAIERSGEYSGLYHVLGGALNPLEGIGPEQL 120 Query: 126 GIQSLIERIEVKKIR-------ELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 + S +R++ + E+I A S T+EG+ TA Y+ D LK +K TRLAYG+P Sbjct: 121 NLGSFYKRLQPENPEALGAKVEEIILATSMTVEGEATAAYLADMLKERGIKATRLAYGLP 180 Query: 179 MGSELDYLDDGTIFEAIRSRT 199 +G L+Y D+ T+ A+ +R Sbjct: 181 VGGSLEYADEVTLARALENRR 201 >gi|218960784|ref|YP_001740559.1| recombination protein RecR [Candidatus Cloacamonas acidaminovorans] gi|167729441|emb|CAO80352.1| recombination protein RecR [Candidatus Cloacamonas acidaminovorans] Length = 199 Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 102/194 (52%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +E LI+ R PG G ++A+R +LV + + LAE + CS C Sbjct: 2 LFSENLEKLIQSFNRFPGIGRKTAQRLAWYLVAQDKNFALNLAETIKTTVESFKTCSQCN 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + +DPC CI R S + VVE+ +D+ LE Y VLG LSPLD GPE Sbjct: 62 MLSESDPCPFCISPDRSDSYLCVVENSSDIQILEGMNEFKGRYFVLGHLLSPLDGYGPEQ 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I L+ERIE E+I A+ + EG+ T HY+ + LK + ITRL+ GIP G +L+ Sbjct: 122 INTAMLLERIENLHPSEVILALKPSAEGEATIHYLWELLKDKGISITRLSTGIPFGGDLE 181 Query: 185 YLDDGTIFEAIRSR 198 Y + T+ A + R Sbjct: 182 YSNLNTLANAWKRR 195 >gi|294101972|ref|YP_003553830.1| recombination protein RecR [Aminobacterium colombiense DSM 12261] gi|293616952|gb|ADE57106.1| recombination protein RecR [Aminobacterium colombiense DSM 12261] Length = 204 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 112/193 (58%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + + L+ +L R+PG G +SARR ++++ LA A+ + ++C CS CGN+ Sbjct: 4 PEPLLQLVTLLKRLPGVGEKSARRMAFFIIQQPGSYPEELAIALHGLKERLCECSKCGNI 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 DPC+IC D R+ + VVE DL ++E++ N LYHVL G +SPLD Sbjct: 64 TDVDPCSICTDPLRERQTLCVVETAEDLLSMEQAGIYNGLYHVLKGKISPLDGEDLPPSE 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L ERI +++E+I A + +EG T + + +L+ +DVKI+RLAYG+P+G +++ Sbjct: 124 YERLKERIINTRVKEVIIATNPRVEGDLTFYSLFSELEDLDVKISRLAYGLPVGGSIEFA 183 Query: 187 DDGTIFEAIRSRT 199 D T+ A SR Sbjct: 184 DRITLHAAFESRV 196 >gi|303256852|ref|ZP_07342866.1| recombination protein RecR [Burkholderiales bacterium 1_1_47] gi|330998901|ref|ZP_08322628.1| recombination protein RecR [Parasutterella excrementihominis YIT 11859] gi|302860343|gb|EFL83420.1| recombination protein RecR [Burkholderiales bacterium 1_1_47] gi|329576115|gb|EGG57634.1| recombination protein RecR [Parasutterella excrementihominis YIT 11859] Length = 203 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 2/193 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I LI L ++PG GPR+A+R L+ L EA+ V C+ C N+ Sbjct: 6 AIAELIDALKKLPGVGPRAAQRIAYQLLNGDRSDANRLGEALLKATKTVHRCARCNNLTD 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C+ C RD S++ +VE VADL +E+S + + Y +L G LSPL+ +GP +IG+ Sbjct: 66 GELCSYCSSHNRDDSLLCIVESVADLMVIEQSLSYHGRYFILMGRLSPLNGVGPHEIGLD 125 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDYL 186 L+ER +++E+I A S T EG+ TA + + L +K+TR+A G+P G+E++Y Sbjct: 126 KLLERAGEPEVKEVIIATSFTAEGEATAFAVSELLSKHYPQLKLTRIARGVPAGAEIEYT 185 Query: 187 DDGTIFEAIRSRT 199 D T+ +A+ +R Sbjct: 186 DVNTVAQAMLNRR 198 >gi|225850087|ref|YP_002730321.1| recombination protein RecR [Persephonella marina EX-H1] gi|225646377|gb|ACO04563.1| recombination protein RecR [Persephonella marina EX-H1] Length = 202 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 124/198 (62%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 I ++ ++ ++ +PG+G +SA+R ++L+ + + + ++ K+ CS C Sbjct: 5 DIIPSTLKEAVEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSEC 64 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 G + C+IC ++RD SVI VVE+ D +A+E++ +YHV+GG LSPL+ I E Sbjct: 65 GLYTEEEICSICSSEERDRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAE 124 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 D+ I+ L+ER++ ++E+I A + T+EG+ TA YI + LK DV I+R+AYG+P G+ L Sbjct: 125 DLNIEKLVERVDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVL 184 Query: 184 DYLDDGTIFEAIRSRTVL 201 + DD T+ +A+ +T++ Sbjct: 185 ENADDFTLSKALEHKTII 202 >gi|323342244|ref|ZP_08082476.1| recombination protein R [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463356|gb|EFY08550.1| recombination protein R [Erysipelothrix rhusiopathiae ATCC 19414] Length = 196 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 116/196 (59%), Gaps = 2/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K++E LI+ +PG G ++A R L ++ ++ Q + ++ + N++ C +C Sbjct: 1 MYPKKLEQLIESFMMLPGVGQKTAERYALSILDQQTQDVDKFSQDLTIARNEIQSCKVCH 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D RD S+I VV + +++E+ + +YHVLGG +S I PE+ Sbjct: 61 NLSDEEICQICKDNTRDRSIICVVATAKEAFSIEKMNEYHGVYHVLGGLISTQKGILPEN 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SLI R+ + + E+I A++AT+EG+ T+ Y+ KL+ ++RLA+G+P+G LD Sbjct: 121 LNILSLINRV-DENVTEVILALNATVEGEMTSLYLAKKLED-KTDVSRLAFGLPIGGHLD 178 Query: 185 YLDDGTIFEAIRSRTV 200 Y DD T+ +A R+ Sbjct: 179 YADDMTLMKAFEGRSK 194 >gi|320527139|ref|ZP_08028326.1| recombination protein RecR [Solobacterium moorei F0204] gi|320132467|gb|EFW25010.1| recombination protein RecR [Solobacterium moorei F0204] Length = 198 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 4/199 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K + LI+ L +PG G ++A R +++ Q A+A+ +++ K+ C ICG Sbjct: 1 MYPKSLTELIERLKFLPGVGEKTAERYAFSIMEMNLQEAKEFAQAINDVHEKITHCRICG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C IC D R+ I VV+ D+ A+E++ YHVL G +S I P D Sbjct: 61 NLSEKEECEICRDDSRNQKQIFVVQSPKDVIAMEKTAEYRGTYHVLNGLISSSKGIMPND 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182 + I+SL+ R+ + E+I + TI+G+TTA Y+ + + V +TR+A+G+P G Sbjct: 121 LNIESLLARL--PEAEEVILGTNITIDGETTAMYLDKLITSRYPHVLVTRIAHGLPSGGM 178 Query: 183 LDYLDDGTIFEAIRSRTVL 201 LDY D+ T+ A+ R + Sbjct: 179 LDYADEMTLAHALADRRRM 197 >gi|189184710|ref|YP_001938495.1| recombination protein RecR [Orientia tsutsugamushi str. Ikeda] gi|238692026|sp|B3CV64|RECR_ORITI RecName: Full=Recombination protein recR gi|189181481|dbj|BAG41261.1| recombination protein RecR [Orientia tsutsugamushi str. Ikeda] Length = 203 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I+ LI A++PG G RSARR L+L++ KE + L + ++ N + C Sbjct: 1 MHKD--SNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMEC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+D C IC +RD+S I VVE VADLWALERSK YHVLG +LS + Sbjct: 59 DYCGNLDIVSICNICKHSERDSSTIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGN 118 Query: 121 GPED-IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 + + + L+ RI K++E+I A ++TI+GQ TA +++D LK ++KI++LA GIP+ Sbjct: 119 DAVNSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPL 178 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 G ELDYLD+GT+ A ++R Sbjct: 179 GGELDYLDEGTLLAAFKARQS 199 >gi|269123196|ref|YP_003305773.1| recombination protein RecR [Streptobacillus moniliformis DSM 12112] gi|268314522|gb|ACZ00896.1| recombination protein RecR [Streptobacillus moniliformis DSM 12112] Length = 195 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 117/194 (60%), Gaps = 1/194 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K+I+ L+ +L+ + G G ++A R L+ K E + L + + Y + CS+C N+ Sbjct: 2 KKIDELVLVLSNLKGIGKKNATRIAFDLLSKDEDDINYLLYTIKSAYENIKPCSVCHNLT 61 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 C IC R+ +VI VVED D++A ++ + N LYHVLGG + PL+ IG +++ I Sbjct: 62 DLGICDICSSTNRNKNVICVVEDTRDIYAFNKASSYNGLYHVLGGKIDPLNGIGIDELNI 121 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 SL+ RI + I E+I A++ +EG+TT Y+ L ++VK++R+A GIP+G ++Y D Sbjct: 122 DSLLSRI-DENINEVILALNPDLEGETTILYLTKLLSNMNVKVSRIASGIPIGGNIEYSD 180 Query: 188 DGTIFEAIRSRTVL 201 T+ +++ R ++ Sbjct: 181 SATLIKSLEGRVII 194 >gi|46447358|ref|YP_008723.1| recombination protein RecR [Candidatus Protochlamydia amoebophila UWE25] gi|73621502|sp|Q6MAF1|RECR_PARUW RecName: Full=Recombination protein recR gi|46400999|emb|CAF24448.1| probable recombination protein RecR [Candidatus Protochlamydia amoebophila UWE25] Length = 198 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 114/194 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LI IL + PG G +SA R HL+ + L L+E + N +K+ C CG Sbjct: 3 YPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNCGC 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + C C QRD+ +I V D++++E + LYHVLGG LSPL+ GPE + Sbjct: 63 LTDEAACYFCDINQRDSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPEHL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L RI+ +I+E++ A+ +T+EG TA ++ +L D++I+RLA+G+PMGS LDY Sbjct: 123 SISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSSLDY 182 Query: 186 LDDGTIFEAIRSRT 199 +D GT+ A+ R+ Sbjct: 183 VDGGTLARALAGRS 196 >gi|298368786|ref|ZP_06980104.1| recombination protein RecR [Neisseria sp. oral taxon 014 str. F0314] gi|298282789|gb|EFI24276.1| recombination protein RecR [Neisseria sp. oral taxon 014 str. F0314] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M KK LI L +P GP+SA+R L++ K + L +A+ N V C Sbjct: 6 MNKK--PDAFTRLINALKVLPNVGPKSAQRMAHQLLQHKREEAQELVDALQNALRLVHHC 63 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C + C IC D R+ +++V AD+ +E + + LY VL G +SP + Sbjct: 64 KLCNTFCEEELCGICSDSDRNPHRLMIVHMPADVSNMEAANCHDGLYFVLMGQISPAQGM 123 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + + LIER++ + E+I A + T EG TA+ + + K + K++RLA GIP+G Sbjct: 124 DLSAVALDKLIERLQNSETEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLG 183 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R + Sbjct: 184 GELEYVDAGTLAQAVYERRSI 204 >gi|261365093|ref|ZP_05977976.1| recombination protein RecR [Neisseria mucosa ATCC 25996] gi|288566519|gb|EFC88079.1| recombination protein RecR [Neisseria mucosa ATCC 25996] Length = 206 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + + LI L +P GP+SA+R L++ K Q L EA+ ++ C Sbjct: 1 MSK--SPDALTRLINALKVLPNVGPKSAQRMAHQLLQHKRQEAENLVEALQYALLQIQHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C N +D C IC D RD +++V AD+ +E + + LY VL G +SP + Sbjct: 59 RMCNNFCESDLCEICSDANRDPRRLMIVHMPADVSNMETANCHDGLYFVLMGQVSPAQGM 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L+ R++ ++ E+I A + T EG TA+ + + K + K++RLA GIP+G Sbjct: 119 DISHISLDKLVARLQNSEVEEIIIATNFTAEGDATAYVLAELFKPLPYKVSRLARGIPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R +L Sbjct: 179 GELEYVDAGTLAQAVYERRML 199 >gi|34540960|ref|NP_905439.1| recombination protein RecR [Porphyromonas gingivalis W83] gi|73621505|sp|Q7MV45|RECR_PORGI RecName: Full=Recombination protein recR gi|34397275|gb|AAQ66338.1| recombination protein RecR [Porphyromonas gingivalis W83] Length = 207 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 121/199 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +K + + +E I A +PG G ++A R L+L+++ + A A+ ++ + C Sbjct: 1 MIQKYSSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ +D C IC D RD S + VVE++ D+ A+E + LYHVLGG +SP+D I Sbjct: 61 RHCHNISDSDVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ ++I E+I A+S T+EG TT ++ KL+ V+++ +A GI +G Sbjct: 121 GPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLEPTGVRVSVIARGIAIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSILNRT 199 >gi|189219684|ref|YP_001940325.1| Recombinational DNA repair protein RecR [Methylacidiphilum infernorum V4] gi|189186542|gb|ACD83727.1| Recombinational DNA repair protein RecR [Methylacidiphilum infernorum V4] Length = 199 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 110/196 (56%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I+NLI L +PG GPRSA R TL+L+++ + LA+++ I K+ CS CG Sbjct: 4 FPPAIQNLIHSLKELPGIGPRSAERITLYLLEETKGTKQKLAQSINEIGAKIKPCSRCGF 63 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 C+IC+D RD +V D+ +ER+ A +YHVLG +SPL+ PED+ Sbjct: 64 YTEETLCSICLDHSRDKQCFCLVIHPIDVIKIERTGAFRGVYHVLGKKISPLEGHVPEDL 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 + L++RI+ +K RE+I A E + TA YI LK ++++ LA G+P GS L+Y Sbjct: 124 PLSPLLQRIDEEKPREIILAFGTDAEAEATALYIGQILKKRAIRVSSLAMGLPAGSGLEY 183 Query: 186 LDDGTIFEAIRSRTVL 201 D T+ A+ R L Sbjct: 184 ADSVTLSYALSGRREL 199 >gi|288800003|ref|ZP_06405462.1| recombination protein RecR [Prevotella sp. oral taxon 299 str. F0039] gi|288333251|gb|EFC71730.1| recombination protein RecR [Prevotella sp. oral taxon 299 str. F0039] Length = 205 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 127/199 (63%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 ++ +E + L+++PG G ++A R LHL+++ E + + ++ + ++ C+ Sbjct: 4 NQQYPSLLLEKAVGELSKLPGVGRKTALRLALHLLRQNESEVETFSSSILKMKQEIKHCN 63 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C NV T+ C IC D +RD++V+ VVE++ D+ A+E ++ N LYHVLGG +SP+D IG Sbjct: 64 CCHNVSDTEICPICADARRDSTVVCVVENIQDVMAIENTQQYNGLYHVLGGVISPMDGIG 123 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P DI I SL+ER+ ++E+IFA+ +T+EG TT YI +L V +T +A GI +G+ Sbjct: 124 PADIEIDSLVERVSQGGVKEIIFALGSTMEGDTTNFYISKRLASYGVLLTVIARGISVGN 183 Query: 182 ELDYLDDGTIFEAIRSRTV 200 EL+Y D+ T+ +I +RT Sbjct: 184 ELEYTDEVTLGRSILNRTP 202 >gi|167752635|ref|ZP_02424762.1| hypothetical protein ALIPUT_00890 [Alistipes putredinis DSM 17216] gi|167659704|gb|EDS03834.1| hypothetical protein ALIPUT_00890 [Alistipes putredinis DSM 17216] Length = 198 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 121/196 (61%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + ++++ L+++PG G R+A R +HL++ + + + ++ + C +C N+ Sbjct: 2 SRLLQDVTGELSKLPGIGRRTALRLAIHLLRMEPDSVSDMTRSIDRFRRDIKYCKLCNNL 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC D++RD + + VVE VAD+ ++E ++ LYHVLGG +SP+ I P D+ Sbjct: 62 SDEEICPICADRERDHTTVCVVEQVADVLSIENTRQYRGLYHVLGGVISPMQGIAPSDLK 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID-VKITRLAYGIPMGSELDY 185 I LIERI IRE+I AIS ++EG+TT Y++++L+ VK+T +A GI G EL+Y Sbjct: 122 IDLLIERIAQGTIREVILAISTSVEGETTLFYLLNRLRQYPQVKVTSIARGIGFGDELEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ TI A+ +R + Sbjct: 182 VDELTITHALMNRREI 197 >gi|148284115|ref|YP_001248205.1| recombination protein RecR [Orientia tsutsugamushi str. Boryong] gi|166918741|sp|A5CCA2|RECR_ORITB RecName: Full=Recombination protein recR gi|146739554|emb|CAM79283.1| recombination protein [Orientia tsutsugamushi str. Boryong] Length = 203 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 126/201 (62%), Gaps = 3/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K IE LI A++PG G RSARR L+L++ KE + L + ++ N + C Sbjct: 1 MHKD--SNIIEELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMEC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CGN+D C IC +RD+S+I +VE VADLWALERSK YHVLG +LS + Sbjct: 59 DYCGNLDVVSICNICRHSERDSSIIAIVESVADLWALERSKVFKGWYHVLGKTLSAVSGN 118 Query: 121 GPED-IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 + + + L+ RI K++E+I A ++TI+GQ TA +++D LK ++KI++LA GIP+ Sbjct: 119 DAINSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPL 178 Query: 180 GSELDYLDDGTIFEAIRSRTV 200 G ELDYLD+GT+ A ++R Sbjct: 179 GGELDYLDEGTLLAAFKARQS 199 >gi|149197777|ref|ZP_01874826.1| recombination protein RecR [Lentisphaera araneosa HTCC2155] gi|149138998|gb|EDM27402.1| recombination protein RecR [Lentisphaera araneosa HTCC2155] Length = 200 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 109/200 (54%), Gaps = 1/200 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K+ ++ + I+ +A +PG G + A + L L E L A + ++ + + C+ Sbjct: 1 MKLYPEQFQQAIETIASLPGIGKKGAEKLALALYSWPESKLKHFASLIDSMQHDLHNCAQ 60 Query: 63 CGNVDT-TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 CG C IC D +R I VVE V+ L +E+S + LYHVL G LSP+ IG Sbjct: 61 CGFFSQKDALCPICSDPKRLNHQICVVEQVSQLPVIEKSGSFKGLYHVLHGKLSPMSGIG 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 P+DI I SL++R + + E+I A S IEGQ TA +I L + TR+A GIP+G+ Sbjct: 121 PDDINIDSLLQRCKENHVSEVILATSTDIEGQATASFIAKLLNEHGINTTRIAQGIPIGA 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 +L+Y D +I AI SR L Sbjct: 181 DLNYADAASIAMAINSRREL 200 >gi|160946874|ref|ZP_02094077.1| hypothetical protein PEPMIC_00835 [Parvimonas micra ATCC 33270] gi|158447258|gb|EDP24253.1| hypothetical protein PEPMIC_00835 [Parvimonas micra ATCC 33270] Length = 202 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K I+ +I L+++P G +SA + L +++ + A+++ N+ C Sbjct: 1 MNN--YTKSIDEVIHYLSKLPSIGRKSATKMALKILEMDDDFTIEFAKSLINMKKNTHHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICGN+ + C IC D++RD S+I VVED+ + +LE++K YH+L G ++P + I Sbjct: 59 KICGNLTEDEICNICADEKRDKSIITVVEDMQGVISLEKTKVYKGTYHILNGLVTPREGI 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPM 179 +D+ + SL+ERIE ++E+IFAIS TI+G+ T YI+D LK D+KI+++A GIP+ Sbjct: 119 TLDDLNVDSLLERIEKDNVKEVIFAISQTIDGELTELYIVDLLKNFKDLKISKIANGIPV 178 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G +D D+ T +A+ R + Sbjct: 179 GRSIDSYDELTFLKALEDRREI 200 >gi|114326923|ref|YP_744080.1| recombination protein RecR [Granulibacter bethesdensis CGDNIH1] gi|122328092|sp|Q0BVJ5|RECR_GRABC RecName: Full=Recombination protein recR gi|114315097|gb|ABI61157.1| recombination protein recR [Granulibacter bethesdensis CGDNIH1] Length = 202 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 93/192 (48%), Positives = 128/192 (66%), Gaps = 5/192 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G E+E LI +LAR+PG GPRSARRA L L+++ E L PLA AM N V C +CG Sbjct: 1 MGGPELEQLIALLARLPGLGPRSARRAALRLLQQPETRLLPLAAAMQNAARAVKTCRVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+D+ DPC++C D R+ +I VVE V DLWA++R+ LYHVLGG LS L GP+ Sbjct: 61 NLDSADPCSVCTDPSRENGLICVVESVGDLWAMDRAGIYRGLYHVLGGVLSALAGTGPDA 120 Query: 125 IGIQSLIERIEVKKI-----RELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 + +L+ RIE + E+I A+ AT++G TTAH++ ++L+ + V +TRLA GIP+ Sbjct: 121 LNWPALMRRIESSRPSATPVTEVILALGATVDGATTAHWLAEQLRPMGVSVTRLAQGIPI 180 Query: 180 GSELDYLDDGTI 191 G LD LDDGT+ Sbjct: 181 GGALDVLDDGTL 192 >gi|7007421|dbj|BAA90838.1| RecR [Bacillus halodurans] Length = 164 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 74/164 (45%), Positives = 110/164 (67%) Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97 KE + A+A+ N+ K+ CS+C N+ TDPC IC D +RD SVI VV+D D+ A+ Sbjct: 1 MKEDDVLDFAKALVNVKRKLTYCSVCHNITDTDPCRICEDSKRDESVICVVQDAKDVIAM 60 Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157 E+ K + YHVL G++SP+D IGPEDI I LI+R++ I+E+I A + TIEG+ TA Sbjct: 61 EKMKEYHGKYHVLHGAISPMDGIGPEDIKIPELIKRLQDDTIQEVIVATNPTIEGEATAM 120 Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 YI +K +K+TR+A+G+P+G +L+Y D+ T+ +A+ R L Sbjct: 121 YISRLVKPTGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREL 164 >gi|320451189|ref|YP_004203285.1| recombination protein RecR [Thermus scotoductus SA-01] gi|320151358|gb|ADW22736.1| recombination protein RecR [Thermus scotoductus SA-01] Length = 194 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 123/196 (62%), Gaps = 4/196 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + L + L+R+PG GP++A++ +LHL +E+ + +C +CGN Sbjct: 3 YPESLLKLARALSRLPGIGPKTAQKLSLHLAFHREEAEELERA--LAGLEALGVCRVCGN 60 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C IC D+ RD SVI VVE V+DL+ALERS + LYHVLGG+L+PL+ +GP ++ Sbjct: 61 LAEGELCPICQDETRDRSVIAVVETVSDLYALERSGEFHGLYHVLGGALNPLEGVGPREL 120 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++SL + + E++ A S T+EG+ TA ++ ++LK ++ +RLAYG+P+G L+Y Sbjct: 121 NLESL--WARLSGVEEVVLATSMTVEGEATALFLAEELKRRGIRASRLAYGLPVGGSLEY 178 Query: 186 LDDGTIFEAIRSRTVL 201 +D+ T+ A+ R L Sbjct: 179 VDEVTLGRALEGRKPL 194 >gi|255067895|ref|ZP_05319750.1| recombination protein RecR [Neisseria sicca ATCC 29256] gi|255047883|gb|EET43347.1| recombination protein RecR [Neisseria sicca ATCC 29256] Length = 201 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K LI L +P GP+SA+R L++ K + L +A+ +V C Sbjct: 1 MSK--APDAFTRLINALKILPNVGPKSAQRMAHQLLQSKREQAQELVDALQYALKQVQHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C C IC D+ RD +++V AD+ +E + + LY VL G +SP + Sbjct: 59 RMCNTFCEGSLCDICSDESRDKHRLMIVHMPADVSNMETANCHDGLYFVLMGQISPAQGM 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L+ R++ + E+I A + T EG TA+ + + K + K++RLA GIP+G Sbjct: 119 DVSAIALDKLVARLQNADVEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R + Sbjct: 179 GELEYVDAGTLAQAVYERRAI 199 >gi|225075251|ref|ZP_03718450.1| hypothetical protein NEIFLAOT_00254 [Neisseria flavescens NRL30031/H210] gi|241758800|ref|ZP_04756913.1| recombination protein RecR [Neisseria flavescens SK114] gi|261380151|ref|ZP_05984724.1| recombination protein RecR [Neisseria subflava NJ9703] gi|224953426|gb|EEG34635.1| hypothetical protein NEIFLAOT_00254 [Neisseria flavescens NRL30031/H210] gi|241321008|gb|EER57221.1| recombination protein RecR [Neisseria flavescens SK114] gi|284796989|gb|EFC52336.1| recombination protein RecR [Neisseria subflava NJ9703] Length = 201 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K LI L +P GP+SA+R L++ K + L +A+ +V C Sbjct: 1 MSKN--PDAFVRLINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C D C IC D++R+ S +++V AD+ ++E + + LY VL G +SP + Sbjct: 59 RMCNTFCEGDLCEICADEKREKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGM 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + + L+ R++ I E+I A + T EG TA+ + + K + K++RLA GIP+G Sbjct: 119 DISAVALDKLVARLQASDIEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 E++Y+D GT+ +A+ R + Sbjct: 179 GEMEYVDAGTLAQAVYDRRNI 199 >gi|258621804|ref|ZP_05716835.1| recombination protein RecR [Vibrio mimicus VM573] gi|258586035|gb|EEW10753.1| recombination protein RecR [Vibrio mimicus VM573] Length = 197 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 1/177 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP D Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGG 179 >gi|188995254|ref|YP_001929506.1| recombination protein RecR [Porphyromonas gingivalis ATCC 33277] gi|229470335|sp|B2RKL4|RECR_PORG3 RecName: Full=Recombination protein recR gi|188594934|dbj|BAG33909.1| putative recombination protein RecR [Porphyromonas gingivalis ATCC 33277] Length = 207 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 119/199 (59%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +K + +E I A +PG G ++A R L+L+++ + A A+ ++ + C Sbjct: 1 MIQKYPSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N+ + C IC D RD S + VVE++ D+ A+E + LYHVLGG +SP+D I Sbjct: 61 RRCHNISDSGVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GP D+ I SL+ R+ ++I E+I A+S T+EG TT ++ KL+ V+++ +A GI +G Sbjct: 121 GPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLESTGVRVSVIARGIAIG 180 Query: 181 SELDYLDDGTIFEAIRSRT 199 E++Y D+ T+ +I +RT Sbjct: 181 DEIEYADEITLGRSILNRT 199 >gi|114778109|ref|ZP_01452996.1| recombination protein RecR [Mariprofundus ferrooxydans PV-1] gi|114551527|gb|EAU54081.1| recombination protein RecR [Mariprofundus ferrooxydans PV-1] Length = 204 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 114/200 (57%), Gaps = 1/200 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + ++++L+ +PG GP++A R L+L+ + LA+A+ ++ +V C Sbjct: 1 MHFPGMPAPLARVVEMLSSLPGVGPKTAMRMGLNLLTRPAGDAAALAQALECLHEQVGFC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CG C C D RDA+ + VVE D+ +ER YHVL G LSP+D + Sbjct: 61 PVCGCFSEQGHCHFCDDPSRDAATLCVVEQPVDVLMMERGHGYRGSYHVLLGRLSPVDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + + SL ++ + I E+I A SAT++G+ TAHY+ ++ + V ++R++ G+P G Sbjct: 121 GPEQLRLASL-DQRMKQGINEIILATSATVDGEATAHYLANRYQHAGVSVSRISRGVPEG 179 Query: 181 SELDYLDDGTIFEAIRSRTV 200 EL+YLD+ T+ A+ R Sbjct: 180 GELEYLDEHTLSRALDQRVS 199 >gi|218283246|ref|ZP_03489307.1| hypothetical protein EUBIFOR_01895 [Eubacterium biforme DSM 3989] gi|218216001|gb|EEC89539.1| hypothetical protein EUBIFOR_01895 [Eubacterium biforme DSM 3989] Length = 195 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K ++LI ++PG G ++A R ++ E + +AE + N+ KV C+ CG Sbjct: 1 MYPKTFDDLIYEFQKLPGVGAKTAERYAFTVLSWNEDEISEMAETLINLKKKVKKCTCCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ + C C +R+ ++I VV++ D+ +E + N +YHVL G ++ + P+ Sbjct: 61 NLTEDELCEFCKSSKRNQNIICVVQNPKDISVIESMQEFNGVYHVLDGLINTQKGVLPDQ 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I SL++RI + E+I A+ T+EG+TTA YI L+G +++RLA+GIP+GS LD Sbjct: 121 LNIMSLLKRI-NENTEEVILALDPTVEGETTALYISKLLEGKC-RVSRLAHGIPVGSHLD 178 Query: 185 YLDDGTIFEAIRSRTV 200 Y D T+ +A R Sbjct: 179 YTDAMTLLKAFEGRKS 194 >gi|261415549|ref|YP_003249232.1| recombination protein RecR [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372005|gb|ACX74750.1| recombination protein RecR [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327932|gb|ADL27133.1| recombination protein RecR [Fibrobacter succinogenes subsp. succinogenes S85] Length = 198 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 112/199 (56%), Gaps = 1/199 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + +ENLI A +PG G ++ARR H++ +K+ + A+++ KV C Sbjct: 1 MNVEPQSLENLISEFASLPGIGLKTARRLAYHMLSRKKGDVERFADSLMQAAEKVHPCPR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C D C C + A I VVE +D+ ERS LY VLGG +SPLD IGP Sbjct: 61 CHAFTDEDICPTCR-AREGAKSICVVEKNSDILPFERSSVHKGLYFVLGGVISPLDGIGP 119 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + + L+ERI+ + I EL+ A+ ++ E +TA I L G++VK TRLA GIPMGS+ Sbjct: 120 EALHLPQLVERIKAENIEELVLALGSSPEADSTALMIDRMLAGVNVKRTRLARGIPMGSD 179 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+++D+ T+ A R L Sbjct: 180 LEFIDEVTMLRAFEGRVSL 198 >gi|319638361|ref|ZP_07993123.1| recombination protein recR [Neisseria mucosa C102] gi|317400110|gb|EFV80769.1| recombination protein recR [Neisseria mucosa C102] Length = 201 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K LI L +P GP+SA+R L++ K + L +A+ +V C Sbjct: 1 MSKN--PDAFVRLINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C D C IC D++RD S +++V AD+ ++E + + LY VL G +SP + Sbjct: 59 RMCNTFCEGDLCEICADEKRDKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGM 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + + L+ R++ I E+I A + T EG TA+ + + K + K++RLA GIP+G Sbjct: 119 DISSVALDKLVVRLQASDIEEIIIATNFTAEGDATAYILAELFKNLPYKVSRLARGIPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 E++Y+D GT+ +A+ R + Sbjct: 179 GEMEYVDAGTLAQAVYDRRNI 199 >gi|289523017|ref|ZP_06439871.1| recombination protein RecR [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503560|gb|EFD24724.1| recombination protein RecR [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 205 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 116/194 (59%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K +E+LI++ R PG G +SARR L L+++ + LAE +A + + CS CGN+ Sbjct: 5 KALEDLIRLFERFPGIGEKSARRMVLFLLQQPKSFSESLAECIAKCNSLLHPCSRCGNIT 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 DPC+IC D RD S I +VE V DL +E++ N LY VLG SPLD + Sbjct: 65 DEDPCSICCDPFRDKSTICIVESVEDLITIEQAGIYNGLYFVLGSLYSPLDDEEIAPQIL 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L++R+ ++++E+I A S +EG+ T + I ++ + V ++RL+YG+P+G + + D Sbjct: 125 ERLLKRVSEEEVKEVILAFSPKVEGELTMNLISKIMEPLPVTVSRLSYGLPVGGSVSFAD 184 Query: 188 DGTIFEAIRSRTVL 201 T+ A+ +RT + Sbjct: 185 RTTLHAALEARTYI 198 >gi|326404390|ref|YP_004284472.1| recombination protein RecR [Acidiphilium multivorum AIU301] gi|325051252|dbj|BAJ81590.1| recombination protein RecR [Acidiphilium multivorum AIU301] Length = 196 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 88/186 (47%), Positives = 122/186 (65%), Gaps = 2/186 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE L+ ++AR+PG GPRSARR L L+ ++EQ L PL A+ +V +C CG Sbjct: 1 MMGPEIERLVGLMARLPGLGPRSARRIVLRLMAEREQRLLPLIAALDAACQRVAVCPTCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 +D+ PC IC D R+ +I VVE VAD WALER+ YHVLGG LS + GPED Sbjct: 61 GLDSQQPCMICADAAREP-LICVVETVADQWALERAAVYRGRYHVLGGLLSAIAGHGPED 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI L+ R+ +RE+I A+ AT++GQ TAHY+ ++L V +TRLA G+P+G ++ Sbjct: 120 LGIDRLVARL-DGSVREVILALPATVDGQATAHYLTERLATCGVSVTRLAQGVPVGGSIE 178 Query: 185 YLDDGT 190 LD+GT Sbjct: 179 ILDEGT 184 >gi|148260990|ref|YP_001235117.1| recombination protein RecR [Acidiphilium cryptum JF-5] gi|172047773|sp|A5G016|RECR_ACICJ RecName: Full=Recombination protein recR gi|146402671|gb|ABQ31198.1| recombination protein RecR [Acidiphilium cryptum JF-5] Length = 196 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 88/186 (47%), Positives = 123/186 (66%), Gaps = 2/186 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G EIE L+ ++AR+PG GPRSARR L L+ ++EQ L PL A+ +V +C +CG Sbjct: 1 MMGPEIERLVGLMARLPGLGPRSARRIVLRLMAEREQRLLPLIAALDAACQRVAVCPVCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 +D+ PC IC D R+ +I VVE VAD WALER+ YHVLGG LS + GPED Sbjct: 61 GLDSQQPCMICADAAREP-LICVVETVADQWALERAAVYRGRYHVLGGLLSAIAGHGPED 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 +GI L+ R+ +RE+I A+ AT++GQ TAHY+ ++L V +TRLA G+P+G ++ Sbjct: 120 LGIDRLVARL-DGSVREVILALPATVDGQATAHYLTERLATCGVSVTRLAQGVPVGGSIE 178 Query: 185 YLDDGT 190 LD+GT Sbjct: 179 ILDEGT 184 >gi|282857784|ref|ZP_06266993.1| recombination protein RecR [Pyramidobacter piscolens W5455] gi|282584454|gb|EFB89813.1| recombination protein RecR [Pyramidobacter piscolens W5455] Length = 201 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 1/196 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + IE+LI +L + PG G +SARR +++++ E LA ++ + ++ C CGN+ Sbjct: 4 PEPIEHLISLLKKFPGVGEKSARRMAFYVLQEGEGFGTDLARSVGELNRRLTTCEKCGNL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVL-GGSLSPLDRIGPEDI 125 T PC IC D RD S++ V E + DL ++E+S N LY VL DR + Sbjct: 64 TETQPCPICSDPLRDRSLLCVTETIEDLVSIEQSGLFNGLYFVLGTSLSPLEDRESLPEG 123 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 ++SL +R E IRE I A + IEG T + +++ L+ + VK +RLAYG+P+G +++ Sbjct: 124 TVRSLRKRFEEYPIREAIIATNPRIEGDMTFYALLEALRDLPVKKSRLAYGLPVGGSIEF 183 Query: 186 LDDGTIFEAIRSRTVL 201 D T+ A+ SR + Sbjct: 184 ADRVTLHAALESRQEI 199 >gi|258626251|ref|ZP_05721098.1| recombination protein RecR [Vibrio mimicus VM603] gi|258581303|gb|EEW06205.1| recombination protein RecR [Vibrio mimicus VM603] Length = 180 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 67/178 (37%), Positives = 103/178 (57%), Gaps = 1/178 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 3 TSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C IC + +R + VVE AD+ ALE + + Y VL G LSPLD IGP D Sbjct: 63 FTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSD 122 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 IG+ +L R++ K I E+I A + T+EG+ TA YI + + V +R+A+G+P+G Sbjct: 123 IGLDTLDYRLQRKDISEVILATNPTVEGEATAQYIAELCREHQVTASRIAHGVPVGGS 180 >gi|187918328|ref|YP_001883891.1| recombination protein RecR [Borrelia hermsii DAH] gi|119861176|gb|AAX16971.1| recombination protein RecR [Borrelia hermsii DAH] Length = 194 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 105/189 (55%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I++LI +++++PG G ++A R ++ K E+ L + ++N+++ + C C N Sbjct: 3 IQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAEE 62 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC+D R+ +VI VVE DL +E + + Y VL G L PL IGP + + Sbjct: 63 EFCDICMDLSRNKNVICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNLDK 122 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L + + +E+I A +IEG TA+YI LK +D+ +TR+A G+P+G + D Sbjct: 123 LEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNADKM 182 Query: 190 TIFEAIRSR 198 T A+R R Sbjct: 183 TTLRALRLR 191 >gi|254480509|ref|ZP_05093756.1| recombination protein RecR [marine gamma proteobacterium HTCC2148] gi|214039092|gb|EEB79752.1| recombination protein RecR [marine gamma proteobacterium HTCC2148] Length = 172 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 104/170 (61%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 TLHL+++ + LA A+ + +K+ CS C N D C IC D +RD S I VVE Sbjct: 1 MTLHLLERDREGASELAGALQSAVDKIDHCSRCRNFTELDVCEICADIKRDVSTICVVET 60 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 AD+ A+E+S + +Y VL G LSP+D IGP +IG+ +R+ + I E+I A + T+ Sbjct: 61 PADVLAVEQSGSFRGIYFVLMGHLSPIDGIGPAEIGLDKFQQRVVDEGIEEVILATNPTV 120 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 EG+ TA+Y+ D L+ V ++R+A+G+P+G EL+Y+D T+ A R Sbjct: 121 EGEATAYYLSDALQRQGVNVSRIAHGVPLGGELEYVDGSTLAHAFSGRRP 170 >gi|329119116|ref|ZP_08247807.1| recombination protein R [Neisseria bacilliformis ATCC BAA-1200] gi|327464747|gb|EGF11041.1| recombination protein R [Neisseria bacilliformis ATCC BAA-1200] Length = 201 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K L L +P GP+SA+R HL++ LAEA+ + +V C Sbjct: 1 MPK--PQDAYSRLTDALKTLPNVGPKSAQRIAFHLLQHNRDGATELAEALQHALKQVRHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C + C +C D +RD +++V AD+ +E + + LY VL G ++P + Sbjct: 59 TRCNTFCEDEICPVCADPERDGRRLMIVHMPADVAGMEAAHCHDGLYFVLMGQINPAQGM 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 E I ++ LI R+ ++ E+I A T EG TA+ + + LK + KI+RLA G+P+G Sbjct: 119 DLEHIALEKLIARLGGGEVEEIIIATGFTAEGDATAYVLAELLKTLPCKISRLARGMPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +EL+Y+D GT+ +A+ R L Sbjct: 179 AELEYIDAGTLAQAVYERRQL 199 >gi|308389330|gb|ADO31650.1| putative recombination protein [Neisseria meningitidis alpha710] Length = 206 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 105/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL++ K + L +A+ +V C Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEVANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|194098674|ref|YP_002001736.1| recombination protein RecR [Neisseria gonorrhoeae NCCP11945] gi|240014108|ref|ZP_04721021.1| recombination protein RecR [Neisseria gonorrhoeae DGI18] gi|240112968|ref|ZP_04727458.1| recombination protein RecR [Neisseria gonorrhoeae MS11] gi|240121670|ref|ZP_04734632.1| recombination protein RecR [Neisseria gonorrhoeae PID24-1] gi|240123572|ref|ZP_04736528.1| recombination protein RecR [Neisseria gonorrhoeae PID332] gi|240128276|ref|ZP_04740937.1| recombination protein RecR [Neisseria gonorrhoeae SK-93-1035] gi|238690202|sp|B4RLV1|RECR_NEIG2 RecName: Full=Recombination protein recR gi|193933964|gb|ACF29788.1| putative recombination protein [Neisseria gonorrhoeae NCCP11945] gi|317164276|gb|ADV07817.1| recombination protein RecR [Neisseria gonorrhoeae TCDC-NG08107] Length = 206 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 106/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL+++K + L +A+ +V C Sbjct: 1 MMNSKKQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVRHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|319942673|ref|ZP_08016980.1| hypothetical protein HMPREF9464_02199 [Sutterella wadsworthensis 3_1_45B] gi|319803756|gb|EFW00691.1| hypothetical protein HMPREF9464_02199 [Sutterella wadsworthensis 3_1_45B] Length = 208 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 86/208 (41%), Positives = 118/208 (56%), Gaps = 8/208 (3%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVK-KKEQLLGPLAEAMANIYNKVCL 59 M ++ + I L+K L +PG+GPRSA+RA L+ K+ L L +A+A+ KV Sbjct: 1 MPQE-SSPAIAALVKALEALPGYGPRSAQRAAFFLLSPKRRGELQALRQALADAETKVHR 59 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C C IC D RDAS++ VVE V D ALE+S LY +LGG LSP+D Sbjct: 60 CPRCRTWCEGAVCEICADPSRDASLLCVVETVQDQMALEKSLNWPGLYFILGGRLSPMDD 119 Query: 120 IGPEDIGIQSLIERIE----VKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRL 173 +GP +IG L+ RIE +RE++ A S T EG TA+Y+M +K ++ITRL Sbjct: 120 MGPTEIGFPELLVRIEEGLAENGLREIVVATSYTPEGDATAYYLMGAVKKRWPQLRITRL 179 Query: 174 AYGIPMGSELDYLDDGTIFEAIRSRTVL 201 A G+P G E++Y D TI AI R + Sbjct: 180 ARGLPSGLEVEYTDLATIAAAIEDRRQI 207 >gi|296840852|ref|ZP_06863600.2| recombination protein RecR [Neisseria polysaccharea ATCC 43768] gi|296839800|gb|EFH23738.1| recombination protein RecR [Neisseria polysaccharea ATCC 43768] Length = 206 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 104/201 (51%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL++ K + L +A+ +V C Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|168700666|ref|ZP_02732943.1| recombinant protein RecR [Gemmata obscuriglobus UQM 2246] Length = 201 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 107/190 (56%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I L++ L ++PG GP+SA R L+ + LA+A+ + ++V C C N+ Sbjct: 10 IAGLLEELTKLPGVGPKSAERIAHFLLAGDRRHAVELADALRAVADRVRPCKECFNLTDG 69 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC D +RD ++ VVE D+ + ER+ LYHVLGG L+PLD +GP+ + + Sbjct: 70 ELCPICSDPKRDGGLLCVVETPRDVNSFERAGNFRGLYHVLGGRLAPLDGMGPDRLTFTA 129 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L+ER+ +RE+I A S T+EG TA L V++TRLA G+P GS L+ + Sbjct: 130 LVERVRRGGVREVILATSPTLEGDGTALLASTVLAQTGVQVTRLARGLPSGSSLELANAQ 189 Query: 190 TIFEAIRSRT 199 + EA+ R Sbjct: 190 MLAEALDGRR 199 >gi|294053805|ref|YP_003547463.1| recombination protein RecR [Coraliomargarita akajimensis DSM 45221] gi|293613138|gb|ADE53293.1| recombination protein RecR [Coraliomargarita akajimensis DSM 45221] Length = 198 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 1/193 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 E L++ ++PG G RSA R + L+ +K + L L ++ V C CGN+ Sbjct: 3 PAFEELLQQFKKLPGLGYRSAERIAMQLLVEKPESLERLLSSLQRAQQVVGRCEQCGNLA 62 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 CA+C D++RD V+ VVE V DL A+ERS A YHVL G LSP+ +GPED+ Sbjct: 63 EEGTCAVCTDERRDPQVLCVVEHVTDLMAIERSAAWKGQYHVLHGKLSPIHGVGPEDLNF 122 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDYL 186 +L +R+ IRE++ A+S IEGQ T HYI +++ ++++R+ +G+P G + Y Sbjct: 123 SALEKRLSAGSIREIVLALSNDIEGQATCHYIQEEIVGERAIQVSRIGFGLPSGGGVTYA 182 Query: 187 DDGTIFEAIRSRT 199 D T+ A+ +R Sbjct: 183 DSVTLKSALEARR 195 >gi|254444294|ref|ZP_05057770.1| recombination protein RecR [Verrucomicrobiae bacterium DG1235] gi|198258602|gb|EDY82910.1| recombination protein RecR [Verrucomicrobiae bacterium DG1235] Length = 197 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 119/193 (61%), Gaps = 1/193 (0%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 E L K L R+PG G RSA R ++L+ +K + L+EA+ V CS+CGNV Sbjct: 3 PAFEALQKELKRLPGVGFRSAERMAIYLLLEKPEAAERLSEAILRARECVRSCSVCGNVC 62 Query: 68 TTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C+IC D +R+ S + VVE V+DL A+E+S A YHVL G LSP++ +GPE++ Sbjct: 63 EDELCSICADSRREESGSLCVVEHVSDLMAIEKSGAYRGRYHVLHGKLSPINGVGPENLN 122 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 + L +RIE + + ELI A+ +EG+ T HY+ + ++ V+++R+ +G+P G+ + Y Sbjct: 123 LDGLAKRIEEEGVGELILALPNDVEGEATCHYLTELVESDKVEVSRIGFGLPSGASVLYA 182 Query: 187 DDGTIFEAIRSRT 199 D GT+ A+ +R Sbjct: 183 DSGTLKSALDARK 195 >gi|254671965|emb|CBA04385.1| recombination protein RecR [Neisseria meningitidis alpha275] Length = 206 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 105/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL++ K + L +A+ +V C Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|269214881|ref|ZP_05987334.2| recombination protein RecR [Neisseria lactamica ATCC 23970] gi|269208788|gb|EEZ75243.1| recombination protein RecR [Neisseria lactamica ATCC 23970] gi|319410486|emb|CBY90847.1| recombination protein RecR [Neisseria meningitidis WUE 2594] Length = 206 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 104/201 (51%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL++ K + L +A+ +V C Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|15677109|ref|NP_274261.1| recombination protein RecR [Neisseria meningitidis MC58] gi|121634930|ref|YP_975175.1| putative recombination protein [Neisseria meningitidis FAM18] gi|254805017|ref|YP_003083238.1| recombination protein RecR [Neisseria meningitidis alpha14] gi|20139759|sp|Q9JZ92|RECR_NEIMB RecName: Full=Recombination protein recR gi|166221948|sp|A1KU46|RECR_NEIMF RecName: Full=Recombination protein recR gi|7226477|gb|AAF41618.1| recombination protein RecR [Neisseria meningitidis MC58] gi|120866636|emb|CAM10387.1| putative recombination protein [Neisseria meningitidis FAM18] gi|254668559|emb|CBA06030.1| recombination protein RecR [Neisseria meningitidis alpha14] gi|254670087|emb|CBA04989.1| recombination protein RecR [Neisseria meningitidis alpha153] gi|325140533|gb|EGC63054.1| recombination protein RecR [Neisseria meningitidis CU385] gi|325144619|gb|EGC66918.1| recombination protein RecR [Neisseria meningitidis M01-240013] Length = 206 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 105/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL++ K + L +A+ +V C Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|171913849|ref|ZP_02929319.1| recombination protein RecR [Verrucomicrobium spinosum DSM 4136] Length = 202 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 1/202 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M I LI + +PG G RSA R L ++ + LA A+A + +V +C Sbjct: 1 MPALDYPAPIRELILQMKSLPGIGQRSAERLVLWMMGRGHARAAELARALAQLEQRVGIC 60 Query: 61 SICGNVDTTDP-CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CG D C +C +R +V+ VVE AD+ LERS A + YHVLGG LSPLD Sbjct: 61 PECGFFIERDAACGLCQSDKRQTTVVCVVEQAADVLRLERSGAFSGQYHVLGGRLSPLDN 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 I P D+ I+ L R+ E+I A+SA +EG+ TA+Y+ D L+ + VK+TRLA G+P Sbjct: 121 ITPSDLRIRELAARVPALGAEEVILALSADVEGEATANYLADILRPLGVKVTRLAQGMPA 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G LD++D+ T+ A+ R + Sbjct: 181 GGGLDHVDEMTLHHALSGRRAM 202 >gi|294670722|ref|ZP_06735597.1| hypothetical protein NEIELOOT_02444 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307610|gb|EFE48853.1| hypothetical protein NEIELOOT_02444 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 201 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 111/201 (55%), Gaps = 2/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K LI L +P GP+SA+R L++ + L EA+ + +V C Sbjct: 1 MSK--PQDAFSRLIHALKILPNVGPKSAQRMAYQLLQYNREGAEELVEALQHALKQVRHC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C + + C IC + +RD +++V AD+ +E + + LY VL G +SPL + Sbjct: 59 TLCNTLCENELCEICANPERDGKRLMIVHMPADVAGMEAAHCHDGLYFVLMGHISPLQDM 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I ++ L+ R++ +I E+I A + T EG TA+ + + LK + K++RLA G+P+G Sbjct: 119 DLGHIALEQLVGRLQNSEIEEIIIATNFTAEGDATAYILAELLKNLPYKVSRLARGMPLG 178 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +EL+Y+D GT+ +A+ R L Sbjct: 179 AELEYIDAGTLAQAVYDRKQL 199 >gi|239998982|ref|ZP_04718906.1| recombination protein RecR [Neisseria gonorrhoeae 35/02] gi|240016543|ref|ZP_04723083.1| recombination protein RecR [Neisseria gonorrhoeae FA6140] gi|240080667|ref|ZP_04725210.1| recombination protein RecR [Neisseria gonorrhoeae FA19] gi|240115722|ref|ZP_04729784.1| recombination protein RecR [Neisseria gonorrhoeae PID18] gi|240118018|ref|ZP_04732080.1| recombination protein RecR [Neisseria gonorrhoeae PID1] gi|240125754|ref|ZP_04738640.1| recombination protein RecR [Neisseria gonorrhoeae SK-92-679] gi|254493774|ref|ZP_05106945.1| recombination protein recR [Neisseria gonorrhoeae 1291] gi|260440466|ref|ZP_05794282.1| recombination protein RecR [Neisseria gonorrhoeae DGI2] gi|268594830|ref|ZP_06128997.1| recombination protein recR [Neisseria gonorrhoeae 35/02] gi|268596789|ref|ZP_06130956.1| recombination protein recR [Neisseria gonorrhoeae FA19] gi|268599049|ref|ZP_06133216.1| recombination protein recR [Neisseria gonorrhoeae MS11] gi|268601402|ref|ZP_06135569.1| recombination protein recR [Neisseria gonorrhoeae PID18] gi|268603731|ref|ZP_06137898.1| recombination protein recR [Neisseria gonorrhoeae PID1] gi|268682202|ref|ZP_06149064.1| recombination protein recR [Neisseria gonorrhoeae PID332] gi|268684353|ref|ZP_06151215.1| recombination protein recR [Neisseria gonorrhoeae SK-92-679] gi|268686674|ref|ZP_06153536.1| recombination protein recR [Neisseria gonorrhoeae SK-93-1035] gi|291043766|ref|ZP_06569482.1| recombination protein recR [Neisseria gonorrhoeae DGI2] gi|226512814|gb|EEH62159.1| recombination protein recR [Neisseria gonorrhoeae 1291] gi|268548219|gb|EEZ43637.1| recombination protein recR [Neisseria gonorrhoeae 35/02] gi|268550577|gb|EEZ45596.1| recombination protein recR [Neisseria gonorrhoeae FA19] gi|268583180|gb|EEZ47856.1| recombination protein recR [Neisseria gonorrhoeae MS11] gi|268585533|gb|EEZ50209.1| recombination protein recR [Neisseria gonorrhoeae PID18] gi|268587862|gb|EEZ52538.1| recombination protein recR [Neisseria gonorrhoeae PID1] gi|268622486|gb|EEZ54886.1| recombination protein recR [Neisseria gonorrhoeae PID332] gi|268624637|gb|EEZ57037.1| recombination protein recR [Neisseria gonorrhoeae SK-92-679] gi|268626958|gb|EEZ59358.1| recombination protein recR [Neisseria gonorrhoeae SK-93-1035] gi|291012229|gb|EFE04218.1| recombination protein recR [Neisseria gonorrhoeae DGI2] Length = 205 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + LI L +P GP+SA+R HL+++K + L +A+ +V C Sbjct: 1 MNSK-KQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVRHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 60 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGM 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 120 DVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 180 GELEYVDAGTLAQAVYERRLI 200 >gi|146328633|ref|YP_001209842.1| recombination protein RecR [Dichelobacter nodosus VCS1703A] gi|166221936|sp|A5EY33|RECR_DICNV RecName: Full=Recombination protein recR gi|146232103|gb|ABQ13081.1| recombination protein RecR [Dichelobacter nodosus VCS1703A] Length = 201 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 112/193 (58%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L++ L + G G ++A+R L L+ KK LA+A+ V C C N Sbjct: 3 FSPSFDALVQALTCLSGVGKKTAQRMALDLLLKKNAEAATLAKALTTALATVQRCRYCRN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C +C D R+ I VVE AD+ A+E++ L+ VL G ++PLD +GPE + Sbjct: 63 LSDAEVCLLCADPLRNRQQICVVETPADVIAIEQATDYRGLFFVLMGHIAPLDGMGPEAL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L +R+ + I EL+ A +AT+EG+TTA+++ + ++ TRLAYG+P+GSEL Y Sbjct: 123 GMDILDDRLANEAISELVLATNATLEGETTAYFLAELAAKHGIQATRLAYGVPLGSELSY 182 Query: 186 LDDGTIFEAIRSR 198 +D T+ A +SR Sbjct: 183 IDKQTLHHAFQSR 195 >gi|297621416|ref|YP_003709553.1| Recombination protein recR [Waddlia chondrophila WSU 86-1044] gi|297376717|gb|ADI38547.1| Recombination protein recR [Waddlia chondrophila WSU 86-1044] Length = 204 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 112/198 (56%), Gaps = 1/198 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + LI+ L R+PG G +SA R +++ + L A+ ++ + K+ C Sbjct: 5 MLMNY-PKHLLQLIEALKRLPGVGNKSAERFAFQMLEWTPKHLKLTADLISQLPEKLKHC 63 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + CA C ++ + ++ V+ D++A+E + +Y VLG +SPL+ Sbjct: 64 EECGCLIGDEQCAFCQPKRMEQEMMCVIASPKDVYAIEETHQFKGVYQVLGFLISPLEGK 123 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 GPE + ++ L ERI IRE++ A+ +T+EG T+ Y+ +L+ + V ++RLA G+PMG Sbjct: 124 GPERLPLEKLNERIRRLGIREVVIALDSTLEGDATSLYLKRELEPLKVNVSRLALGLPMG 183 Query: 181 SELDYLDDGTIFEAIRSR 198 S LDY+D GT+ A R Sbjct: 184 SSLDYVDGGTLARAFSGR 201 >gi|296120962|ref|YP_003628740.1| recombination protein RecR [Planctomyces limnophilus DSM 3776] gi|296013302|gb|ADG66541.1| recombination protein RecR [Planctomyces limnophilus DSM 3776] Length = 207 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 74/188 (39%), Positives = 115/188 (61%) Query: 13 LIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72 L++ LA +PG G +SA R HL+ E+ LA A+ ++ + CS+C N+ + C Sbjct: 19 LVQQLAALPGIGQKSAERLAQHLLDCSEEEAAALAHAILDVRRTIRRCSVCHNLTEQETC 78 Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIE 132 IC+D +RD ++ +VE DL ALE + +YHVLGG ++PL +GP+D+ + +LI Sbjct: 79 DICLDSRRDQGLVCIVEQPRDLLALEATGTFGGVYHVLGGRIAPLSGVGPDDLNLATLIR 138 Query: 133 RIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIF 192 R++ KIREL+ A + T+EG TA YI++ L VKITRLA GI GS L++ + + Sbjct: 139 RVKAGKIRELVMATNPTLEGDGTALYIVNLLADEPVKITRLARGIATGSVLEFANREMLS 198 Query: 193 EAIRSRTV 200 +A++ R Sbjct: 199 DALKGRQS 206 >gi|59801182|ref|YP_207894.1| putative recombination protein [Neisseria gonorrhoeae FA 1090] gi|293399049|ref|ZP_06643214.1| recombination protein RecR [Neisseria gonorrhoeae F62] gi|73621500|sp|Q5F8K5|RECR_NEIG1 RecName: Full=Recombination protein recR gi|59718077|gb|AAW89482.1| putative recombination protein [Neisseria gonorrhoeae FA 1090] gi|291610463|gb|EFF39573.1| recombination protein RecR [Neisseria gonorrhoeae F62] Length = 205 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 1/201 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + LI L +P GP+SA+R HL+++K + L +A+ +VC C Sbjct: 1 MNSK-KQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEELVDALQTALRQVCHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 60 ARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCHDGLYFVLMGQINTALGM 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R++ +I E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 120 DVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 179 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 180 GELEYVDAGTLAQAVYERRLI 200 >gi|325136277|gb|EGC58885.1| recombination protein RecR [Neisseria meningitidis M0579] gi|325202069|gb|ADY97523.1| recombination protein RecR [Neisseria meningitidis M01-240149] gi|325208177|gb|ADZ03629.1| recombination protein RecR [Neisseria meningitidis NZ-05/33] Length = 205 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 104/200 (52%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + LI L +P GP+SA+R HL++ K + L +A+ +V C+ Sbjct: 1 MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCA 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 MCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEVANCHDGLYFVLMGQINTALGMD 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 VSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 ELEYVDAGTLAQAVYERRLI 200 >gi|161870080|ref|YP_001599250.1| recombination protein RecR [Neisseria meningitidis 053442] gi|226739006|sp|A9LZB7|RECR_NEIM0 RecName: Full=Recombination protein recR gi|161595633|gb|ABX73293.1| recombination protein [Neisseria meningitidis 053442] Length = 205 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 104/200 (52%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + LI L +P GP+SA+R HL++ K + L +A+ +V C+ Sbjct: 1 MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVHHCA 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 MCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMD 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 VSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 ELEYVDAGTLAQAVYERRLI 200 >gi|256828011|ref|YP_003156739.1| recombination protein RecR [Desulfomicrobium baculatum DSM 4028] gi|256577187|gb|ACU88323.1| recombination protein RecR [Desulfomicrobium baculatum DSM 4028] Length = 201 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + ++ ++ + +PG GP+SA R L L+K E+ + + + + + +CS Sbjct: 1 MQRLPAPLQKIVDQFSALPGVGPKSALRMALTLLKWPEESVRSFGRDIEGLRSALHICSR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + +DPC +C D +R + +V + L +E S Y +LGG LSPLD I Sbjct: 61 CCGLADSDPCHLCADPKRTPEQLCLVSEWDSLMVMEESGIFKGRYLILGGLLSPLDGIDA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180 + + L + ++RE+I A+ +T+E + T Y+ + L DV +TRLA GIP+G Sbjct: 121 RSLEMDKLESILREGQVREVILALGSTMEAEATGSYVHNLLTRSFPDVAVTRLAQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SEL Y+D T+ ++++ R L Sbjct: 181 SELKYVDRETLKQSLKHRQSL 201 >gi|225163779|ref|ZP_03726078.1| recombination protein RecR [Opitutaceae bacterium TAV2] gi|224801609|gb|EEG19906.1| recombination protein RecR [Opitutaceae bacterium TAV2] Length = 198 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTD 70 E L + L ++PG G RSA R LHL+ +K L L +A+ + V C+ CGN+ TD Sbjct: 5 ERLQQQLKQLPGLGYRSAERIALHLLVEKPARLPALVQALEDAARTVRRCTRCGNLAETD 64 Query: 71 PCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSL 130 C +C D RD +++ VVE V DL A+ERS A YHVL G LSP++ +GP+D+ L Sbjct: 65 LCPLCADPTRDPAIVCVVEHVPDLVAMERSAAYRGHYHVLHGKLSPINGVGPDDLNYAPL 124 Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID--VKITRLAYGIPMGSELDYLDD 188 +R++ I ELI A+S +EG+ T H++ +L + +KITR+ +G+P G+ + Y D Sbjct: 125 ADRVQRGDIHELILALSNDVEGEATCHFLTQQLTTLQPALKITRIGFGLPSGAGVLYADS 184 Query: 189 GTIFEAIRSRTV 200 T+ A+ +RT Sbjct: 185 VTLKSALEARTS 196 >gi|325130316|gb|EGC53083.1| recombination protein RecR [Neisseria meningitidis OX99.30304] Length = 205 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 104/200 (52%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + LI L +P GP+SA+R HL++ K + L +A+ +V C+ Sbjct: 1 MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCA 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 MCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMD 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 VSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 ELEYVDAGTLAQAVYERRLI 200 >gi|203287906|ref|YP_002222921.1| recombination protein RecR [Borrelia recurrentis A1] gi|201085126|gb|ACH94700.1| recombination protein RecR [Borrelia recurrentis A1] Length = 194 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 105/192 (54%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I++LI++++++PG G ++A R ++ + L + + ++ ++ C C N Sbjct: 3 IQDLIELVSKLPGIGKKTAARMVYDILYTGKNFSRALGQILIRLHLEIQKCKNCYNFAEE 62 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC + R+ +I VVE DL +E +K + Y VL G L PL IGP+++ + Sbjct: 63 ELCDICTNLNRNKGIICVVEMPQDLEVIEATKEYDGFYFVLHGHLDPLRNIGPDELNLDK 122 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L I++ K E+I A +IEG TA+YI + LK +D+ +TR+A G+P G + D Sbjct: 123 LENYIKLLKAEEVIIATEFSIEGDVTANYISNLLKDLDINVTRIASGLPAGGSISNADKV 182 Query: 190 TIFEAIRSRTVL 201 T A+R R + Sbjct: 183 TTLRALRLRLKM 194 >gi|218768239|ref|YP_002342751.1| recombination protein RecR [Neisseria meningitidis Z2491] gi|20139753|sp|Q9JUB6|RECR_NEIMA RecName: Full=Recombination protein recR gi|121052247|emb|CAM08572.1| putative recombination protein [Neisseria meningitidis Z2491] gi|309378620|emb|CBX22798.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 205 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 103/200 (51%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + LI L +P GP+SA+R HL++ K + L +A+ +V C+ Sbjct: 1 MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVDHCA 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 RCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMD 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 VSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 ELEYVDAGTLAQAVYERRLI 200 >gi|203284372|ref|YP_002222112.1| recombination protein RecR [Borrelia duttonii Ly] gi|201083815|gb|ACH93406.1| recombination protein RecR [Borrelia duttonii Ly] Length = 194 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 105/192 (54%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I++LI++++++PG G ++A R ++ E L + + ++ ++ C C N Sbjct: 3 IQDLIELVSKLPGIGKKTAARMVYDILYTGENFSRTLGQILIRLHLEIQKCKNCYNFAEE 62 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC + R+ +I VVE DL +E +K + Y VL G L PL IGP+++ + Sbjct: 63 ELCNICTNLNRNKGIICVVEMPQDLEVIEATKEYDGFYFVLHGHLDPLRNIGPDELNLNK 122 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L I++ K E+I A +IEG TA+YI + LK +D+ +TR+A G+P G + D Sbjct: 123 LENYIKLLKAEEVIIATEFSIEGDVTANYISNLLKDLDINVTRIASGLPAGGSISNADKV 182 Query: 190 TIFEAIRSRTVL 201 T A+R R + Sbjct: 183 TTLRALRLRLKM 194 >gi|261392501|emb|CAX50052.1| recombination protein RecR [Neisseria meningitidis 8013] gi|316985096|gb|EFV64049.1| recombination protein RecR [Neisseria meningitidis H44/76] gi|325128357|gb|EGC51241.1| recombination protein RecR [Neisseria meningitidis N1568] gi|325132579|gb|EGC55272.1| recombination protein RecR [Neisseria meningitidis M6190] gi|325134516|gb|EGC57161.1| recombination protein RecR [Neisseria meningitidis M13399] gi|325138352|gb|EGC60921.1| recombination protein RecR [Neisseria meningitidis ES14902] gi|325142492|gb|EGC64896.1| recombination protein RecR [Neisseria meningitidis 961-5945] gi|325198370|gb|ADY93826.1| recombination protein RecR [Neisseria meningitidis G2136] gi|325200132|gb|ADY95587.1| recombination protein RecR [Neisseria meningitidis H44/76] gi|325204221|gb|ADY99674.1| recombination protein RecR [Neisseria meningitidis M01-240355] gi|325205987|gb|ADZ01440.1| recombination protein RecR [Neisseria meningitidis M04-240196] Length = 205 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 104/200 (52%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + LI L +P GP+SA+R HL++ K + L +A+ +V C+ Sbjct: 1 MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHCA 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 +C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 MCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGMD 120 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 VSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLGG 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 ELEYVDAGTLAQAVYERRLI 200 >gi|282899916|ref|ZP_06307877.1| RecR protein [Cylindrospermopsis raciborskii CS-505] gi|281195186|gb|EFA70122.1| RecR protein [Cylindrospermopsis raciborskii CS-505] Length = 171 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 66/171 (38%), Positives = 108/171 (63%), Gaps = 1/171 (0%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 L+++K+ E + LA+ + + +V LC +C ++ C IC + RD+ I VV D Sbjct: 1 MALYILKRPESEIEALAQTLIDAKKQVGLCQVCYHLTAEPVCEICRNPHRDSQTICVVAD 60 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 D+ ALE+++ YHVLGG +SP+D IGPE + +Q+L+ R+ +K +E+I AIS ++ Sbjct: 61 SRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTLQALVRRVSQQKPQEVIMAISPSV 120 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 EG+TT YI LK ++TR+A+G+PMG +L+Y D+ T+ +A+ R L Sbjct: 121 EGETTTLYIAGLLKPF-TRVTRIAFGLPMGGDLEYADEITLAKALEGRREL 170 >gi|313680265|ref|YP_004058004.1| DNA replication and repair protein recr [Oceanithermus profundus DSM 14977] gi|313152980|gb|ADR36831.1| DNA replication and repair protein RecR [Oceanithermus profundus DSM 14977] Length = 197 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 4/198 (2%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + LI+ LAR+PG GP+SA++ LHL + K + + V +C Sbjct: 1 MRYPDRLLA-LIRALARLPGVGPKSAQKLGLHLAQNKAEAAELAQAL-EEVRRHVGVCER 58 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ C +C D RDA VI VVE AD+ A+E+S +YHVLGG+L+PL+ +GP Sbjct: 59 CGNLAEGPLCPVCADPARDAGVIAVVETAADVLAIEKSGEYTGVYHVLGGALNPLEGVGP 118 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++SL+ER + RE+I A S T+EG+ TA Y+ ++L G K++R AYG+P+G Sbjct: 119 EQLRVESLLERA--RSAREVILATSMTVEGEATAAYLSERLAGGPAKLSRPAYGLPVGGT 176 Query: 183 LDYLDDGTIFEAIRSRTV 200 L+Y+D+ T+ A+ R Sbjct: 177 LEYVDEVTLARALAHRQP 194 >gi|288574938|ref|ZP_06393295.1| recombination protein RecR [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570679|gb|EFC92236.1| recombination protein RecR [Dethiosulfovibrio peptidovorans DSM 11002] Length = 203 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 113/193 (58%), Gaps = 1/193 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 E LI +L R+PG G +SARR + + E LA+A ++ + +C ICGN+ Sbjct: 4 PGPFERLIGLLKRLPGVGEKSARRMAFFVFQAPEGYSIELADAFLSLKKNLSVCEICGNL 63 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 PC IC D RD S + VVE + DL ++E++ + LY+VLGG++SPLD + Sbjct: 64 TDRQPCNICSDPLRDRSTLCVVEGIEDLLSIEQAGVYDGLYYVLGGTVSPLDGEDLPEGS 123 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDY 185 + LI IE ++ E+I A + +EG T H ++ LKG+ D+K +RL+YG+P+G +++ Sbjct: 124 LDGLINMIERGRVSEVIVATNPRVEGDMTYHAVLSALKGMSDLKKSRLSYGLPVGGSIEF 183 Query: 186 LDDGTIFEAIRSR 198 D T+ A+ +R Sbjct: 184 ADRVTLHAAMETR 196 >gi|304387501|ref|ZP_07369690.1| recombination protein R [Neisseria meningitidis ATCC 13091] gi|304338388|gb|EFM04509.1| recombination protein R [Neisseria meningitidis ATCC 13091] Length = 206 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 104/201 (51%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+ A+R HL++ K + L +A+ +V C Sbjct: 1 MMSHKKQDAFQGLIDALKVLPNVGPKLAQRIAYHLLQHKRKEAEKLVDALQTALKQVYHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ++C C IC D+ RD ++VV AD+ +E + + LY VL G ++ + Sbjct: 61 AMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L +R+ ++ E+I A + T EG TA+ + + K + K++RL+ GIP+G Sbjct: 121 DVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSEFFKNLPYKVSRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|283768645|ref|ZP_06341557.1| recombination protein RecR [Bulleidia extructa W1219] gi|283105037|gb|EFC06409.1| recombination protein RecR [Bulleidia extructa W1219] Length = 200 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 118/197 (59%), Gaps = 4/197 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + +LI+++ ++PG G ++A R L + +++ A A+ N+ NKV C ICGN Sbjct: 3 YPDSLNHLIEMIRQLPGVGEKTAERYAFALYEMEKEEAIEFAHAIVNMKNKVKNCLICGN 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + CAIC +RD + I+VV+ D+ A+E + +YHVL G +S I PE++ Sbjct: 63 MSEEEQCAICSSSKRDHTKILVVQSPKDIIAIENMGEYDGVYHVLNGLISATKGILPENL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSEL 183 I+ LI+R K+ RE+I A SAT++G+TT+ Y+ L + ++ +TR+A+G+P G+ L Sbjct: 123 KIKELIQRA--KEAREVILATSATLDGETTSLYLTKVLDQEYPNLLVTRIAHGLPSGAML 180 Query: 184 DYLDDGTIFEAIRSRTV 200 DY D+ T+ A+ R Sbjct: 181 DYADEMTLSHALSERRK 197 >gi|268608026|ref|ZP_06141756.1| recombination protein [Ruminococcus flavefaciens FD-1] Length = 164 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 67/164 (40%), Positives = 100/164 (60%) Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97 E + A+A+ + V C C N+ D C IC D +RD+SVI VVE D+ A Sbjct: 1 MDEAAVEDFAKALLDAKKNVHCCQCCQNLTERDICPICADDERDSSVICVVETPKDVTAF 60 Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157 ER++ N +YHVL G LSP+D I P+ + I+ L+ RI + E+I A + T+EG TA Sbjct: 61 ERTREYNGVYHVLHGLLSPMDGITPDKLRIKELLARIAKGGVSEVIMATNPTVEGDATAM 120 Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 YI LK + +K+TRLA+G+P+G L+Y D+ T+F+A+ +R + Sbjct: 121 YIAGLLKPMGIKVTRLAFGLPVGGILEYADEVTLFKALENRNDM 164 >gi|220905409|ref|YP_002480721.1| recombination protein RecR [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869708|gb|ACL50043.1| recombination protein RecR [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 202 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 3/203 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+I + ++ L++ LAR+PG GP+SA RA + L+K E L + ++ + + LC Sbjct: 1 MNKRI-PEPLKALVEQLARLPGLGPKSAMRAAMALLKWPEAETRRLGRGIHDLRDNLHLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CG + +TDPC +C D +R + +V + + L+ Y +LGG L+PL+R+ Sbjct: 60 SRCGGLASTDPCPVCADAERARDTLCLVTEWDSMLTLDEGGFYRGQYMILGGLLAPLERM 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178 E + L+ R++ ++ ELI A+ AT+E + TA +I + G V+I+RLA GIP Sbjct: 120 DAEGLDTDRLVRRLDEGEVTELILALGATLEAENTATFIRRLVAGRFPHVRISRLAQGIP 179 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +G+E+ Y+D T+ ++++ R L Sbjct: 180 LGAEVKYMDKETLRQSLQYRQDL 202 >gi|301165422|emb|CBW24993.1| recombination protein [Bacteriovorax marinus SJ] Length = 197 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 3/196 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + + N+I L++IPG G ++A R TL L K L +AM N+ + C CG Sbjct: 4 PESLLNVIDQLSKIPGVGDKTATRQTLILAKWSADDLNAFGDAMKNLA-NLKACVDCGMY 62 Query: 67 DTTDPCAICIDQQRDASV-IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C IC + +R S + VVE+V D A+ERS LYH+LGG L+PL +GP+++ Sbjct: 63 SDLDYCEICSNSERKESKSVCVVENVTDCLAIERSGNYEGLYHILGGVLNPLMGVGPDEL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I S ++R+ +++ +I A++ ++EG T YI L DV++ R+ +GIPMG L+Y Sbjct: 123 KIDSFVKRVRGLEVKNVILAVNPSVEGDATCSYIKQVL-PSDVEVDRIGFGIPMGGSLEY 181 Query: 186 LDDGTIFEAIRSRTVL 201 LD TI +A+ ++ + Sbjct: 182 LDTMTIAKALENKKKM 197 >gi|269213985|ref|ZP_05983321.2| recombination protein RecR [Neisseria cinerea ATCC 14685] gi|269144904|gb|EEZ71322.1| recombination protein RecR [Neisseria cinerea ATCC 14685] Length = 206 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 106/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + LI L +P GP+SA+R HL++ K + L +A+ +V C Sbjct: 1 MMNPKKQDAFQRLIGALKVLPNVGPKSAQRIAYHLLQHKRKEAEELVDALQTALRQVDHC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+C C+IC D RD +++V AD+ +E + + LY VL G ++ + Sbjct: 61 SMCNTFCEGGLCSICADPSRDVRKLMIVHMPADVSNMEAANCHDGLYFVLMGQINTALGM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I + L ER++ ++I E+I A + T EG TA + + K + KI+RL+ GIP+G Sbjct: 121 DVSAIALDKLAERLKKEEIEEIIIATAFTAEGNATAFVLSEFFKKLPYKISRLSQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 EL+Y+D GT+ +A+ R ++ Sbjct: 181 GELEYVDAGTLAQAVYERRLI 201 >gi|119953251|ref|YP_945460.1| recombination protein RecR [Borrelia turicatae 91E135] gi|119862022|gb|AAX17790.1| recombination protein RecR [Borrelia turicatae 91E135] Length = 194 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 100/192 (52%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 I++LI +L+++PG G ++A R ++ E+ L + + ++ + C C N+ Sbjct: 3 IQDLIVLLSKLPGIGRKTAVRMVYDILYNGEEYSRALGQILIGFHSSIRKCKNCHNLAEG 62 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C IC+D R +I +VE DL +E ++ + LY VL G L PL IGP + + Sbjct: 63 EFCNICMDLSRCKDMICIVEMPQDLEVIESTREYDGLYFVLHGHLDPLRDIGPNRLNLDK 122 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L + +E+I A +IEG TA+YI LK + + +TR+A G+P G + D Sbjct: 123 LENYVREVGAQEVIIATEFSIEGDVTANYISGILKNLGINVTRIASGLPAGGSISNADKI 182 Query: 190 TIFEAIRSRTVL 201 T A+R R + Sbjct: 183 TTLRALRLRLKM 194 >gi|242279900|ref|YP_002992029.1| recombination protein RecR [Desulfovibrio salexigens DSM 2638] gi|259563691|sp|C6BXI4|RECR_DESAD RecName: Full=Recombination protein recR gi|242122794|gb|ACS80490.1| recombination protein RecR [Desulfovibrio salexigens DSM 2638] Length = 201 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 119/201 (59%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + + + + LA++PG GP+SA R L ++K ++ + + +++ ++ K+C+C Sbjct: 1 MENLPEPLRVVAQELAKLPGLGPKSALRIALTMLKMPKEKVTGIGQSVIDLREKLCICEQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C ++ T PC IC D +R+ + +V + L A+E Y VLGG LSPLD + P Sbjct: 61 CASITDTCPCRICSDPKREHDKLCLVSEWDSLLAIEEMGLYRGYYLVLGGLLSPLDGVTP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180 + + Q L ER+E +++ELI A+ AT++ + TA YI + + K ++++RLA GIP+G Sbjct: 121 QHLEFQKLEERLEKGEVKELILALGATVDAEATASYIKNMVESKYPGIELSRLAQGIPIG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SE+ Y D T+ +++ R L Sbjct: 181 SEVKYTDKETLRQSLEYRQKL 201 >gi|187735818|ref|YP_001877930.1| recombination protein RecR [Akkermansia muciniphila ATCC BAA-835] gi|187425870|gb|ACD05149.1| recombination protein RecR [Akkermansia muciniphila ATCC BAA-835] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 1/202 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + L+ L ++PG G R A R L +++ +A + V C Sbjct: 1 MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPC 60 Query: 61 SICGNVDTT-DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 +CG T +PCA C D++RD+ +I VVE D+ +ERS A LYH LGG LSPLD Sbjct: 61 PVCGFFSTEGEPCAACRDEERDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDD 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 + PED+ IQSL+ER+ + E+I A + +EG+ TA Y+ LK +D +I+R A G+P Sbjct: 121 VEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPA 180 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 GS L + D T+ +A+ RT L Sbjct: 181 GSGLSHADTLTLMKALEGRTRL 202 >gi|162149234|ref|YP_001603695.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5] gi|209545028|ref|YP_002277257.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5] gi|161787811|emb|CAP57409.1| putative recombination protein recR [Gluconacetobacter diazotrophicus PAl 5] gi|209532705|gb|ACI52642.1| recombination protein RecR [Gluconacetobacter diazotrophicus PAl 5] Length = 197 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 97/196 (49%), Positives = 133/196 (67%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G +IE LI +LAR+PG GPRSARRA L L+++ + + PLA+AM V CS CG Sbjct: 1 MGGTDIERLIALLARLPGLGPRSARRAALALLRQPQARMLPLAQAMEQAARSVRTCSSCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT DPC IC D RD ++ VVE V DLWALER+ +Y VLGG+LS L +GP+D Sbjct: 61 NLDTHDPCTICADPGRDRGLVCVVETVGDLWALERAGVHRGVYQVLGGTLSALAGMGPDD 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + + SL+ RIE +RE+I A+ AT++G TTAH++ D+L DV ++R+ G+PMG LD Sbjct: 121 LNVASLLARIEQGGVREIILALGATVDGATTAHWLQDRLAAFDVPVSRVGQGVPMGGALD 180 Query: 185 YLDDGTIFEAIRSRTV 200 LDDGT+ A+ +R Sbjct: 181 VLDDGTLAAALMARRP 196 >gi|194246448|ref|YP_002004087.1| Recombinational DNA repair protein [Candidatus Phytoplasma mali] gi|254790778|sp|B3R068|RECR_PHYMT RecName: Full=Recombination protein recR gi|193806805|emb|CAP18232.1| Recombinational DNA repair protein [Candidatus Phytoplasma mali] Length = 206 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 117/203 (57%), Gaps = 10/203 (4%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKK-EQLLGPLAEAMANIYNKVCL 59 M+ +E LI+ +PG G ++A R T L+ +K + + L++ + + N + Sbjct: 1 MKN---SPTVEKLIESFTLLPGVGKKTAERYTFFLINQKNKNKILYLSKHLKELVNNIKS 57 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ICG + + C C D QRD S I++V D D++ E+ + LYH+LGG + Sbjct: 58 CNICGYITEKNICNFCSDSQRDHSTIMIVADNRDVYCFEKINHYHGLYHILGGLIDFSRC 117 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHY----IMDKLKGIDVKITRLAY 175 I PE++ SL +R+ K I+E+I A ++T+EG+ TA Y + LK +KIT+LAY Sbjct: 118 IKPENLNFNSLKDRL--KTIKEIIIATNSTLEGEITATYSKKFLKKYLKDEKIKITKLAY 175 Query: 176 GIPMGSELDYLDDGTIFEAIRSR 198 GIP+G + +YLD+ T+ AI +R Sbjct: 176 GIPIGLDFNYLDEKTLCNAINNR 198 >gi|182414592|ref|YP_001819658.1| recombination protein RecR [Opitutus terrae PB90-1] gi|177841806|gb|ACB76058.1| recombination protein RecR [Opitutus terrae PB90-1] Length = 198 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 1/195 (0%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 E L + L ++PG G RS+ R LHL+ +K Q L L A+ V C+ CGN+ Sbjct: 2 PSAFEKLQQQLKQLPGLGYRSSERIALHLLVEKPQRLPALVAALEEAARTVRRCTRCGNL 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C IC D++RD S++ VVE+V DL ALERS A +YHVL G LSP+ +GP+D+ Sbjct: 62 AEAELCPICADERRDPSLVCVVEEVPDLVALERSGAYRGVYHVLHGKLSPMHGVGPDDLN 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSELDY 185 + SL+ R+E + ELI A+S +EG+ T HY+ ++L KG +ITR+ +G+P G + Y Sbjct: 122 VASLLARVESGAVGELILALSNDVEGEATCHYLTEQLKKGKAPQITRIGFGLPSGGGVLY 181 Query: 186 LDDGTIFEAIRSRTV 200 D T+ A+ +R Sbjct: 182 ADSVTLKSALDARRS 196 >gi|323697996|ref|ZP_08109908.1| recombination protein RecR [Desulfovibrio sp. ND132] gi|323457928|gb|EGB13793.1| recombination protein RecR [Desulfovibrio desulfuricans ND132] Length = 201 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 111/201 (55%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + ++ ++ L+ +PG GP+SA R L L+K + + +++ ++ ++CLC Sbjct: 1 MQNLPGPLKEVVDQLSSLPGIGPKSALRIALTLLKMPRERAAGVGQSILDLRERLCLCED 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + PCAIC D RD + +V + L ALE Y VLGG LSPLD + P Sbjct: 61 CACLAESSPCAICADATRDTGQLCLVPEWDALLALEEMGVYRGKYLVLGGLLSPLDGVDP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180 + I+ L R+ ELI A+ AT++ ++TA Y+ + ++ V +TRLA GIPMG Sbjct: 121 GQLEIERLRRRLASGDFSELILALGATLDAESTASYVKNLVESEFPGVSVTRLAQGIPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +E+ Y+D T+ +++ R + Sbjct: 181 AEVKYMDKETLKQSLVHRQKM 201 >gi|58039072|ref|YP_191036.1| recombination protein RecR [Gluconobacter oxydans 621H] gi|73621489|sp|Q5FTB6|RECR_GLUOX RecName: Full=Recombination protein recR gi|58001486|gb|AAW60380.1| Recombination protein RecR [Gluconobacter oxydans 621H] Length = 198 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 98/197 (49%), Positives = 134/197 (68%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +I+ LI +LAR+PG GPRSARRA L L+++ E + PLA M +V CS+CG Sbjct: 2 MGHGDIDQLITMLARLPGLGPRSARRAALALLRQPESRMLPLAHLMERAATRVKTCSLCG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+DT DPC IC D RD +I VVE V DLWALER+ +Y VLGG+LS L +GP+D Sbjct: 62 NLDTVDPCHICTDAGRDRGLICVVETVGDLWALERAGVHRGVYQVLGGTLSALAGLGPDD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++ L ERIE +RE+I A+SAT+EG TTAH++ ++L V +TR+ +G+PMG LD Sbjct: 122 LNVRPLFERIEEGGVREVILALSATVEGATTAHWLQERLLPTGVTVTRVGHGVPMGGALD 181 Query: 185 YLDDGTIFEAIRSRTVL 201 LDDGT+ A+ +R L Sbjct: 182 VLDDGTLAAALTARRSL 198 >gi|329572902|gb|EGG54523.1| recombination protein RecR [Enterococcus faecalis TX1467] Length = 164 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 67/164 (40%), Positives = 107/164 (65%) Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97 KE+ A+A+ ++ + CSICGN+ DPC IC D+ RD S+I+VVE+ D+ A+ Sbjct: 1 MKEEDANAFAKALISVKRDLHFCSICGNITEEDPCEICQDKNRDRSIILVVEEPKDVMAM 60 Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157 E+ + LYH L G LSP++ GPEDI I SLI+R+ +++E+I A +AT EG+ TA Sbjct: 61 EKMREYQGLYHALHGVLSPMEGTGPEDINIASLIKRLHDDEVKEVIIATNATTEGEATAM 120 Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 Y+ +K + +TRLA+G+ +GS+++Y D+ T+ +A+ R + Sbjct: 121 YLSRLIKPAGITVTRLAHGLSVGSDIEYADEITLLKAVEGRREI 164 >gi|313205704|ref|YP_004044881.1| recombination protein recr [Riemerella anatipestifer DSM 15868] gi|312445020|gb|ADQ81375.1| recombination protein RecR [Riemerella anatipestifer DSM 15868] gi|315022900|gb|EFT35924.1| recombination protein RecR [Riemerella anatipestifer RA-YM] gi|325336853|gb|ADZ13127.1| Recombinational DNA repair protein (RecF pathway) [Riemerella anatipestifer RA-GD] Length = 202 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 119/196 (60%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K +E ++ ++ +PG G +SA R LHL+++ L +A+ N+ ++ C Sbjct: 1 MNFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C N TD C IC D R A ++ VVEDV D+ A+E + Y VLGG +SP++ IGP Sbjct: 61 CHNFSDTDICEICADDSRHAELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + I++L ++E+ +I E+IFA+SAT+EG TT +Y+ K K D+K + +A GI +G E Sbjct: 121 QQLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKKFKHFDIKFSNIARGISVGDE 180 Query: 183 LDYLDDGTIFEAIRSR 198 L+Y D+ ++ +I +R Sbjct: 181 LEYADEVSLGRSILNR 196 >gi|317153156|ref|YP_004121204.1| recombination protein RecR [Desulfovibrio aespoeensis Aspo-2] gi|316943407|gb|ADU62458.1| recombination protein RecR [Desulfovibrio aespoeensis Aspo-2] Length = 201 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 2/200 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + +++ L+ +PG GP+SA R L L+K + + +A+ ++ +CLC Sbjct: 1 MQNIPGPLREVVEQLSSLPGVGPKSALRMALTLLKMPRERANGVGQAILDLRENLCLCEE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + PCAIC D R+ + VV + L A+E Y VLGG LSPLD + P Sbjct: 61 CACLAEASPCAICADPSRETDQLCVVPEWDALLAMEDMGVFRGRYLVLGGLLSPLDGVSP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180 ++ L + +RELI A+ AT++ + TA +I + + + ++RLA GIPMG Sbjct: 121 ANLETDRLRRHLRAGHVRELILALGATLDAEATASFIKNMVGADFSGITVSRLAQGIPMG 180 Query: 181 SELDYLDDGTIFEAIRSRTV 200 E+ ++D T+ +++ R Sbjct: 181 GEVKFMDRETLRQSLVHRQK 200 >gi|326388513|ref|ZP_08210107.1| recombination protein RecR [Novosphingobium nitrogenifigens DSM 19370] gi|326206978|gb|EGD57801.1| recombination protein RecR [Novosphingobium nitrogenifigens DSM 19370] Length = 171 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 86/169 (50%), Positives = 125/169 (73%) Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92 L L+K++E L L +A+A + +++ C CGNVDTT PC IC D +RDA + VVEDV+ Sbjct: 2 LWLIKRRETALTGLVDALATVRDRLVECPTCGNVDTTSPCGICTDTRRDARSLCVVEDVS 61 Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152 DLWAL+R++ YHVLGG LS LD + PED+ I LI+R+ I E++ A++AT+EG Sbjct: 62 DLWALDRARLFTGRYHVLGGRLSALDGVRPEDLNIARLIDRVAGGGIDEVVLAMNATLEG 121 Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 QTTAHY+ ++L+G V+IT+LA+G+P+G ELDYLD+GT+ +A+R+R + Sbjct: 122 QTTAHYLAERLEGYPVRITQLAHGLPVGGELDYLDEGTLAQALRARRPI 170 >gi|303325569|ref|ZP_07356012.1| recombination protein RecR [Desulfovibrio sp. 3_1_syn3] gi|302863485|gb|EFL86416.1| recombination protein RecR [Desulfovibrio sp. 3_1_syn3] Length = 202 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 119/203 (58%), Gaps = 3/203 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +I + ++ L++ LAR+PG GP+SA RA + L+K E L + ++ + + LC Sbjct: 1 MHSRI-PEPLKALVEQLARLPGLGPKSAMRAAMTLLKWPEAETRRLGRGIHDLRDNLHLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CG + +TDPCA+C D R + +V + + L+ Y +LGG L+PL+R+ Sbjct: 60 SRCGGLSSTDPCAVCADAGRTRETLCLVTEWDSMLTLDEGGFYRGQYMILGGLLAPLERM 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178 E + + L R++ ++ ELI A+ AT+E + TA +I ++ ++++RLA GIP Sbjct: 120 DSESLDLDRLTRRLDEGEVTELILALGATLEAENTASFIRQMVRKRFPQIRVSRLAQGIP 179 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +G+E+ Y+D T+ ++++ R + Sbjct: 180 LGAEVKYMDKETLRQSLQYRQDI 202 >gi|28895691|ref|NP_802041.1| recombination protein [Streptococcus pyogenes SSI-1] gi|28810940|dbj|BAC63874.1| putative recombination protein [Streptococcus pyogenes SSI-1] Length = 164 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 66/164 (40%), Positives = 104/164 (63%) Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97 + + A+ + ++ CSICGN+ DPC IC D RD + I+VVED D+ A+ Sbjct: 1 MSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAM 60 Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157 E+ + + YHVL G +SP++ +GP+DI ++SLI R+ K+ E+I A +AT +G+ T+ Sbjct: 61 EKIQEYHGYYHVLHGLISPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSM 120 Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 YI LK +K+TRLA G+ +GS+++Y D+ T+ AI +RT L Sbjct: 121 YISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL 164 >gi|296125711|ref|YP_003632963.1| recombination protein RecR [Brachyspira murdochii DSM 12563] gi|296017527|gb|ADG70764.1| recombination protein RecR [Brachyspira murdochii DSM 12563] Length = 203 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 119/196 (60%), Gaps = 2/196 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ L +I++R+PG G R+A R L+L E+ L A+ + +++ + LCS C ++ Sbjct: 7 QSLDKLTQIISRLPGIGGRTAMRLALYLFDCDEEYLKEFADTLYTLHDNIKLCSKCYSLS 66 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC + +R+ + I VVE D+ A+E+++ N +YHVLGG ++PL IG DI I Sbjct: 67 DNDICYICSNDKREHNKICVVETYPDMLAIEKTEEYNGVYHVLGGLIAPLKGIGISDIRI 126 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAYGIPMGSELDY 185 + LIER+ + I E++ A SA++E TTA YI LK + ++TR+ YGI + S+++ Sbjct: 127 KELIERVNTENIDEIMIAFSASLEADTTAGYIFKLLKDNNYTGRVTRITYGISLSSDIEN 186 Query: 186 LDDGTIFEAIRSRTVL 201 D ++ +I R + Sbjct: 187 ADSRSLARSILDRVEM 202 >gi|33240548|ref|NP_875490.1| recombinational DNA repair protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238076|gb|AAQ00143.1| Recombinational DNA repair protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 169 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 70/168 (41%), Positives = 108/168 (64%), Gaps = 1/168 (0%) Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92 +HL+++ E+ + + A+ N KV C C ++ C IC++ +RD S++ VV D Sbjct: 1 MHLLRQPEEKIKAFSNALLNARTKVGQCKKCFHLTAEIECEICLNPKRDKSLLCVVADSR 60 Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152 DL ALER++ LYHVLGG +SP+D IGPE + I +L++R+ + E+I A++ ++EG Sbjct: 61 DLIALERTREYKGLYHVLGGLISPMDGIGPELLNISALVQRVSNESTAEVILALTPSVEG 120 Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 TT+ YI LK VK+TR+AYG+P+GSEL+Y D+ T+ AI R Sbjct: 121 DTTSLYIARLLKVF-VKVTRIAYGLPVGSELEYADEVTLTRAIEGRRE 167 >gi|298528793|ref|ZP_07016197.1| recombination protein RecR [Desulfonatronospira thiodismutans ASO3-1] gi|298512445|gb|EFI36347.1| recombination protein RecR [Desulfonatronospira thiodismutans ASO3-1] Length = 201 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + ++ L+ L+ +PG GP+SA R + L+K E L +++ ++ +++C+CS Sbjct: 1 MQKLPRSMQLLVDRLSDLPGIGPKSALRMAMTLLKWPEDKTRGLGQSITDLRDQLCICSQ 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + TDPC+IC D R+ + +V + L +E S Y VLGG LSPLD + P Sbjct: 61 CAALADTDPCSICSDAMREQDKLCLVSEWDSLLVMEESGFFKGRYLVLGGLLSPLDGVRP 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180 + + + L E ++ + E+I A+ T+E +TT YI + ++ V++TRLA GIP+G Sbjct: 121 DSLELDKLRENLQSGQTSEIILALGTTLEAETTGSYIKNMVEKEYPHVRVTRLAQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S+L ++D T+ +++R R + Sbjct: 181 SDLKFMDKETLKQSMRFRQNI 201 >gi|255322440|ref|ZP_05363585.1| recombination protein RecR [Campylobacter showae RM3277] gi|255300348|gb|EET79620.1| recombination protein RecR [Campylobacter showae RM3277] Length = 190 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K + ++ L+ R+PG G +SA+R H+ K LA+++ + C Sbjct: 1 MKKGL--EKFNELVAAFERLPGVGKKSAQRYAYHVCLKDSFGGLKLAQSIEDAVRFTGKC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICG + + C IC D+ RD ++ VVE D+ E+S Y VL Sbjct: 59 QICGGLSEDEICDICSDETRDKELLAVVESPKDILVFEQSAIYRGRYFVLEEITPEQTEK 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 L E I + E+IFA++ + +I DKL + VK +++A G+P G Sbjct: 119 ---------LREVIRQNGVTEIIFALTPGLSSDAVMVFIEDKLSDLGVKFSKIAQGVPTG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ SRT L Sbjct: 170 VNLENIDLLSLMKALDSRTEL 190 >gi|118475618|ref|YP_892295.1| recombination protein RecR [Campylobacter fetus subsp. fetus 82-40] gi|118414844|gb|ABK83264.1| recombination protein RecR [Campylobacter fetus subsp. fetus 82-40] Length = 189 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 12/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + K L+ +IPG G +SA + H+ + LA + + + C Sbjct: 1 MPNQKLEK-FNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLNLAHTIEDAVRFLKHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CG + + C IC D RD + +VE D+ +E S + N LY V + Sbjct: 60 SMCGGISENEICDICSDINRDKKTLCIVETPKDILTIEYSNSFNGLYFVFDDA------- 112 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + L I+ I+EL+FA++ +I YI DKLK DV T++A GIP G Sbjct: 113 ----NKLDKLKSNIKENGIKELLFALTPSINSDGMMLYIEDKLKDFDVSFTKIAQGIPTG 168 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +AI+ R L Sbjct: 169 VSLENVDILSLTKAIKDRRSL 189 >gi|258404641|ref|YP_003197383.1| recombination protein RecR [Desulfohalobium retbaense DSM 5692] gi|257796868|gb|ACV67805.1| recombination protein RecR [Desulfohalobium retbaense DSM 5692] Length = 203 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 2/203 (0%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 MQ + ++ LA++PG GP+SA R L L+K ++ L E++ + +CLC Sbjct: 1 MQSNKLPAPLRKVVDELAQLPGVGPKSALRMGLTLLKWPQEKAEGLGESIKQLRRTLCLC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C ++ +PCAIC D RD SV+ ++ D L +E + Y VLGG LSPLD + Sbjct: 61 EQCASLTDQNPCAICADVARDGSVLCLIPDWDSLLVMEEAGFFRGKYFVLGGLLSPLDGV 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178 P+ + + L +R++ +IRE++ A+ T E + T ++ + L K D+++ RLA GIP Sbjct: 121 NPDQLELDRLEKRLDQGEIREVVLALGTTTEAEATESHLKNLLHRKYPDLRVARLAQGIP 180 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +G+ L ++D T+ ++++ R L Sbjct: 181 LGAHLKFMDRETLKQSMQYRQSL 203 >gi|78355115|ref|YP_386564.1| DNA replication and repair protein RecR [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217520|gb|ABB36869.1| DNA replication and repair protein RecR [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 198 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 2/197 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + ++ L+ LAR+PG GP+SA R + L+K E L A+A + + + LC CG++ Sbjct: 2 PEPLKALVDRLARLPGLGPKSALRMAMTLLKWPESETRGLGAAIAQLRDNLHLCRRCGSL 61 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 DPCAIC D R + +V + L A+E Y +LGG L+PLD + PE + Sbjct: 62 TDVDPCAICTDATRGRDTLCLVSEWDSLLAMEDGGFYKGQYMILGGLLAPLDNVNPESLE 121 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELD 184 ++ L R+ ++RE+I + T+E + TA YI + V++TRLA GIP+GSE+ Sbjct: 122 LERLRRRLAEGEVREIILGLGTTLEAENTASYIRSMVNRDFPQVRVTRLAQGIPLGSEVK 181 Query: 185 YLDDGTIFEAIRSRTVL 201 ++D T+ ++++ R L Sbjct: 182 FIDKETLRQSLQFRQDL 198 >gi|319790367|ref|YP_004152000.1| recombination protein RecR [Thermovibrio ammonificans HB-1] gi|317114869|gb|ADU97359.1| recombination protein RecR [Thermovibrio ammonificans HB-1] Length = 201 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I + +E LI+ LA +PG R+A RA L L + E+ + A + +V C CG Sbjct: 2 IYPENLELLIEYLAEVPGISERAAERAVLLLSRLPEERRRQVINAFREL-EQVTPCKECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C +C D +R + I VVE D ++E+ LYHVLGG +SPL+ IGPED Sbjct: 61 LPAAGELCRVCSDPERSRTTICVVEQPRDAISIEKLGEYKGLYHVLGGVISPLEGIGPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + ++SL ERI+ ++E+I A++ T+EG+ TA +++D+L+ + VK+ R+ YGIP G +D Sbjct: 121 LNVKSLFERIKRLGVKEVIIALNPTVEGEATAKFLVDRLQKLGVKVFRIGYGIPYGGTID 180 Query: 185 YLDDGTIFEAIRSRTVL 201 D+ T+ A + ++ Sbjct: 181 NADELTLKRAFEDKKLI 197 >gi|126641730|ref|YP_001084714.1| recombination protein gap repair [Acinetobacter baumannii ATCC 17978] Length = 172 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 71/171 (41%), Positives = 108/171 (63%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 LHL+ K + LA A+ + + CS+C ++ + C IC +RD ++ VVE Sbjct: 1 MALHLLMKNREGAFALAHALHEASSYIHECSVCHSLTEHEICDICASTERDDQLLCVVES 60 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 AD+ A+E+S + YHVLGG LSPLD IGPE+IGI LI+R+ I E+I A +AT+ Sbjct: 61 PADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPYLIQRLSQGTIEEVILATNATV 120 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 EGQ TAHY+++ K + + +TR+A G+P G EL+Y+D T+ +A+ +R + Sbjct: 121 EGQATAHYLVEATKHLPIHMTRIAQGVPQGGELEYVDSHTLSQAVHNRMRM 171 >gi|320104517|ref|YP_004180108.1| DNA replication and repair protein RecR [Isosphaera pallida ATCC 43644] gi|319751799|gb|ADV63559.1| DNA replication and repair protein RecR [Isosphaera pallida ATCC 43644] Length = 203 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 2/193 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN--V 66 +E LI L R+PG G ++A R H++K + LAEA+ +V C IC N Sbjct: 7 TVEKLIAELGRLPGVGAKTAERLAHHILKVPAEEALALAEAIRQAKQRVGYCPICHNLVE 66 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + CAIC D +RD +I VVE DL ALE + +YHVL G L+PL I E + Sbjct: 67 SDHELCAICRDPRRDHGIICVVEQCRDLMALESAGTYQGVYHVLHGRLAPLQGISAEHLT 126 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYL 186 ++SL R+ +RE+I A + +EG TA +I L G+ V IT+LA G+ GS L++ Sbjct: 127 LESLERRMRSGTVREVILATNPNLEGDGTALWISQHLGGLGVPITKLARGLASGSTLEFA 186 Query: 187 DDGTIFEAIRSRT 199 + + +A+ R Sbjct: 187 NKEMLVDALNGRQ 199 >gi|281358638|ref|ZP_06245116.1| recombination protein RecR [Victivallis vadensis ATCC BAA-548] gi|281314868|gb|EFA98903.1| recombination protein RecR [Victivallis vadensis ATCC BAA-548] Length = 210 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 2/203 (0%) Query: 1 MQKKI-TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + +E LI L ++PG G R A R L ++ + + L L + + + V Sbjct: 1 MAGNLSYPDAVEELIGALKQLPGIGRRGAERLALSMLGWEPEKLQYLGKLVETLPATVGS 60 Query: 60 CSICGNVDT-TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118 C CG + + CA+C RD ++ VVE +A ++A+E S YHVLGG LSPLD Sbjct: 61 CPECGALSNAGELCAVCRLPDRDRQLVCVVETMAQVFAIEASGNFRGRYHVLGGRLSPLD 120 Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 + ++ LI ++RE+I A+S +EG+ TA Y+ + L+ V++T+ A G+P Sbjct: 121 AENGAGLNLEKLIGLARSGQVREIILALSPDVEGRATAIYLAELLRDAPVRVTQPALGLP 180 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 G+ L Y D TI A+ RT+L Sbjct: 181 AGANLSYADGATIAAALSGRTIL 203 >gi|46581602|ref|YP_012410.1| recombination protein RecR [Desulfovibrio vulgaris str. Hildenborough] gi|120601238|ref|YP_965638.1| recombination protein RecR [Desulfovibrio vulgaris DP4] gi|46451025|gb|AAS97670.1| recombination protein RecR [Desulfovibrio vulgaris str. Hildenborough] gi|120561467|gb|ABM27211.1| DNA replication and repair protein RecR [Desulfovibrio vulgaris DP4] gi|311235245|gb|ADP88099.1| recombination protein RecR [Desulfovibrio vulgaris RCH1] Length = 201 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 111/201 (55%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + ++ L+ LA++PG GP+SA R + L+K L + ++ + + LC Sbjct: 1 MQRLPEPLKALVDQLAKLPGLGPKSALRLAMTLLKWPASETRRLGRGIHDLRDNLHLCRR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + DPCA+C D R ++ +V + + LE Y +LGG L+PLD + Sbjct: 61 CGALTDCDPCALCTDATRTQDMLCLVSEWDSMLTLEEGGFYRGQYLILGGLLAPLDNVNA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMG 180 + + ++ L R+ ++RE++ A+ T+E + TA +I ++ V++TRLA GIP+G Sbjct: 121 DSLELERLTRRLAEGQVREVVLALGTTVEAENTATFIRAMVERQYPGVRVTRLAQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +E+ ++D T+ ++++ R L Sbjct: 181 AEVKFMDRETLRQSMQYRQEL 201 >gi|262393660|ref|YP_003285514.1| recombination protein RecR [Vibrio sp. Ex25] gi|262337254|gb|ACY51049.1| recombination protein RecR [Vibrio sp. Ex25] Length = 172 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 1/172 (0%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD-ASVIIVVE 89 HL+++ + LA+A++ ++ C+ C + C IC + +R I VVE Sbjct: 1 MAFHLLQRDRKGGLQLADALSQAMTEIGHCTECRTFTEEEVCHICTNPKRQENGQICVVE 60 Query: 90 DVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149 AD+ A+E + + Y VL G LSPLD IGP DIG+ L R+ I E+I A + T Sbjct: 61 SPADIAAVEATGQYSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDIAEVILATNPT 120 Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +EG+ TAHYI + K V +R+A+G+P+G EL+ +D T+ ++ R + Sbjct: 121 VEGEATAHYIAELCKEHQVDASRIAHGVPVGGELELVDGTTLSHSLLGRHRI 172 >gi|225619843|ref|YP_002721100.1| recombination protein RecR [Brachyspira hyodysenteriae WA1] gi|254790754|sp|C0QZV8|RECR_BRAHW RecName: Full=Recombination protein recR gi|225214662|gb|ACN83396.1| recombination protein RecR [Brachyspira hyodysenteriae WA1] Length = 201 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 119/196 (60%), Gaps = 2/196 (1%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 + ++ L +I++R+PG G R+A R L+L ++ L ++ +++++ + LC +C ++ Sbjct: 5 QSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSDVLSSLHENIKLCQVCYSLS 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 D C IC + +R+ + I +VE D+ A+E+++ N +YH+LGG +SPL IG DI I Sbjct: 65 DNDICDICSNDKREHNKICIVESYPDMLAIEKTEEYNGVYHILGGLISPLKGIGISDIRI 124 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGSELDY 185 + LIER+ I E++ A SA++E TTA YI LK + +ITR+ YGI + S+++ Sbjct: 125 KELIERVNNNSIEEIMIAFSASLEADTTASYIYKTLKDNNFNGRITRITYGISLASDIEN 184 Query: 186 LDDGTIFEAIRSRTVL 201 D ++ +I R + Sbjct: 185 ADSRSLARSILDRVDM 200 >gi|223040226|ref|ZP_03610504.1| recombination protein RecR [Campylobacter rectus RM3267] gi|222878479|gb|EEF13582.1| recombination protein RecR [Campylobacter rectus RM3267] Length = 190 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K + ++ L+ R+PG G +SA+R H+ K LA+++ + C Sbjct: 1 MKKGL--EKFNELVAAFERLPGVGKKSAQRYAYHVCLKDSFGGLKLAQSIEDAVRFTGKC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 ICG + + C IC D+ RD ++ VVE D+ E+S Y L Sbjct: 59 QICGGLSEDEICDICSDETRDKELLAVVESPKDILVFEQSAIYRGRYFALEEITQ----- 113 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + L I + E+IFA++ + +I DKL ++VK +++A G+P G Sbjct: 114 ----GQTEKLRTVIVQNGVTEIIFALTPGLSSDAVMIFIEDKLSDLNVKFSKIAQGVPTG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ SRT L Sbjct: 170 VNLENIDILSLMKALDSRTKL 190 >gi|162448527|ref|YP_001610894.1| DNA repair and genetic recombination protein [Sorangium cellulosum 'So ce 56'] gi|161159109|emb|CAN90414.1| DNA repair and genetic recombination protein [Sorangium cellulosum 'So ce 56'] Length = 238 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 113/198 (57%), Gaps = 7/198 (3%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68 + + ++LAR+PG G ++A+R L LV E L + + + + C CG++ Sbjct: 39 LSRVAQLLARLPGVGEKTAQRFALFLVTAGEDTARDLGGELVELCDHIRPCIRCGHIAEL 98 Query: 69 ----TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 CAIC+D +RD +++ VV V DL A+ERS A+ Y VLG LSPL+ +G E+ Sbjct: 99 DDGGRALCAICLDTRRDGALLCVVARVQDLLAIERSGAMRGRYFVLGRLLSPLEGVGAEE 158 Query: 125 IGIQSLIERIEVKK--IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + +++L R+ + +RE++ A +++G+ TA + +L + +++TR+A G+P G + Sbjct: 159 LPLEALRARVRDPEQPVREVLVATPPSVDGEATALLLARELGAMGIQVTRIASGVPHGGD 218 Query: 183 LDYLDDGTIFEAIRSRTV 200 L++ D T+ AI R Sbjct: 219 LEFADQVTLGRAIEGRKS 236 >gi|330993790|ref|ZP_08317722.1| Recombination protein recR [Gluconacetobacter sp. SXCC-1] gi|329759058|gb|EGG75570.1| Recombination protein recR [Gluconacetobacter sp. SXCC-1] Length = 198 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 93/197 (47%), Positives = 134/197 (68%), Gaps = 1/197 (0%) Query: 5 ITGK-EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 ++G+ EI+ L+ +L R+PG GPRSARRA L L+++ + PLA+AM V CS C Sbjct: 1 MSGRGEIDRLVTLLGRLPGLGPRSARRAALALLRQPHARMLPLAQAMEQAARAVRTCSRC 60 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 GN+DTTDPC IC D RD ++ VVE+V DLWALER+ +Y VLGG+LS L +GP+ Sbjct: 61 GNLDTTDPCGICTDPARDDGLVCVVENVGDLWALERAGVHRGVYQVLGGTLSALSGVGPD 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 D+ +Q L++RI +RE+I A+ T+EG TT H++ ++L DV+++R+ G+P+G L Sbjct: 121 DLNVQPLLDRIAAGGVREVILALGTTVEGATTMHWLHERLARFDVQVSRVGQGVPVGGAL 180 Query: 184 DYLDDGTIFEAIRSRTV 200 D LDDGT+ AI +R Sbjct: 181 DVLDDGTLAAAIMARRP 197 >gi|317486261|ref|ZP_07945094.1| recombination protein RecR [Bilophila wadsworthia 3_1_6] gi|316922507|gb|EFV43760.1| recombination protein RecR [Bilophila wadsworthia 3_1_6] Length = 203 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 121/203 (59%), Gaps = 3/203 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +I + ++ L++ LAR+PG GP+SA R + L+K E L + + ++ + + LC Sbjct: 1 MDHRI-PEPLKALVEQLARLPGLGPKSAMRVAMTLLKWPEAETRRLGKGIHDLRDNLRLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CG + TDPC +C D++RD S++ VV + + LE Y +LGG L+PLD + Sbjct: 60 SRCGALTETDPCNVCSDKERDDSLLCVVAEWDSMLTLEEGAFYKGRYLILGGLLAPLDNL 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIP 178 E + + L +R+E ++RE++ A+ AT+E +TT + + + V +TRLA GIP Sbjct: 120 SAESLELDRLTKRLEEGQVREVVLALGATVEAETTGALVRSLVNRRFPGVTVTRLAQGIP 179 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +G+E+ ++D T+ ++++ R + Sbjct: 180 LGAEVKFMDRETLRQSLQYRQEI 202 >gi|116073035|ref|ZP_01470297.1| RecR protein [Synechococcus sp. RS9916] gi|116068340|gb|EAU74092.1| RecR protein [Synechococcus sp. RS9916] Length = 167 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 64/165 (38%), Positives = 105/165 (63%), Gaps = 1/165 (0%) Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADL 94 ++++ E+ + AEA+ ++V C C ++ C IC + +R +I VV D DL Sbjct: 1 MLRQPEEQIQSFAEALLAARSQVGQCQTCFHLSAEPTCEICRNPERSTGMICVVADSRDL 60 Query: 95 WALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQT 154 ALER++ + YHVLGG +SP+D IGP+ + I SL+ R+E + ++E+I A++ ++EG T Sbjct: 61 LALERTREYSGRYHVLGGLISPMDGIGPDMLQITSLVRRVEQEGVQEVILALTPSVEGDT 120 Query: 155 TAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 T+ Y+ LK V ++R+AYG+P+GSEL+Y DD T+ A+ R Sbjct: 121 TSLYLARLLKPFTV-VSRIAYGLPVGSELEYADDVTLTRALEGRR 164 >gi|332970689|gb|EGK09670.1| recombination protein R [Kingella kingae ATCC 23330] Length = 207 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 101/190 (53%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NLI L +P G ++A+R L+++ L A+ ++ C +C D Sbjct: 12 NLIHALRVLPNVGVKTAQRMAFALLQQNRDGAAQLLSALDLALKQIHNCQLCNTFCQDDL 71 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C C D +RD+ +++V AD+ A+E ++ + LY VL G +SP + I + L+ Sbjct: 72 CHTCTDPRRDSRRLMIVHMPADVSAMELARCHDGLYFVLMGQVSPTQDMDLSHIALDKLV 131 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 RI + E+I A + T EG TA+ + + KI+RLA G+P+GSEL+Y+D GT+ Sbjct: 132 ARIAQHPVDEIIIATAFTAEGDATAYVLSELFANQPYKISRLARGMPLGSELEYVDAGTL 191 Query: 192 FEAIRSRTVL 201 +A+ R +L Sbjct: 192 AQAVYERQLL 201 >gi|313606312|gb|EFR83260.1| recombination protein RecR [Listeria monocytogenes FSL F2-208] Length = 144 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 96/143 (67%) Query: 58 CLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117 CS+CG++ DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+ Sbjct: 1 SFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPM 60 Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 D IGPEDI I L++R++ I E+I A + +EG+ TA YI LK +K+TR+A+G+ Sbjct: 61 DGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGL 120 Query: 178 PMGSELDYLDDGTIFEAIRSRTV 200 P+G +L+Y D+ T+ +A+ R Sbjct: 121 PVGGDLEYADEVTLSKAMEGRRE 143 >gi|288818833|ref|YP_003433181.1| recombination protein [Hydrogenobacter thermophilus TK-6] gi|288788233|dbj|BAI69980.1| recombination protein [Hydrogenobacter thermophilus TK-6] gi|308752420|gb|ADO45903.1| recombination protein RecR [Hydrogenobacter thermophilus TK-6] Length = 202 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 1 MQ-KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + K ++ I+ + +IP +G R A R +L+K ++ + + N+ + Sbjct: 1 MAFEDVFPKAMKEAIESIIKIPTYGERGASRFIYNLLKLPQEERIIIVNTLQNLAQSIKK 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ CG + + C+IC D++R I +VE+ D +A+ER + +YHVLGG ++PL+ Sbjct: 61 CAECGLLTDREVCSICSDEKRSKKFICIVEESQDAYAIERLERYTGVYHVLGGRIAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177 I P+D+ I SLI+RIE K +E+I A + +EG+ TA+Y++ LK ++KITR++YG+ Sbjct: 121 ISPQDLSIDSLIQRIERYKPKEVIVATNPNVEGEATANYLIKLLKRRFPNLKITRMSYGL 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 G+ +++ D+ ++ ++I +R Sbjct: 181 QFGTLIEFADELSLEKSIENRK 202 >gi|218887361|ref|YP_002436682.1| recombination protein RecR [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|259563693|sp|B8DQU5|RECR_DESVM RecName: Full=Recombination protein recR gi|218758315|gb|ACL09214.1| recombination protein RecR [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 201 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 111/201 (55%), Gaps = 2/201 (0%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + ++ L++ L+R+PG GP+SA R + L+K L A+ ++ + + LC Sbjct: 1 MQRLPEPLKALVEQLSRLPGLGPKSALRLAMTLLKWPASETRRLGRAVHDLRDNLHLCGR 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + DPC IC D R + +V + L LE Y +LGG L+PLD + Sbjct: 61 CGALTDVDPCGICTDPARSGETLCLVSEWDSLLTLEEGGFYKGQYLILGGLLAPLDNLHA 120 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180 + + + L +R+ +RE++ A+ T+E + TA YI + + + V++TRLA GIP+G Sbjct: 121 DSLELDRLTKRMAEGTVREVVMALGTTVEAENTATYIRNMIVRQYPQVRVTRLAQGIPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SE+ ++D T+ ++++ R L Sbjct: 181 SEVKFMDRETLRQSMQYRQDL 201 >gi|329942834|ref|ZP_08291613.1| recombination protein RecR [Chlamydophila psittaci Cal10] gi|332287427|ref|YP_004422328.1| recombination protein RecR [Chlamydophila psittaci 6BC] gi|313848007|emb|CBY17004.1| recombination protein [Chlamydophila psittaci RD1] gi|325506466|gb|ADZ18104.1| recombination protein RecR [Chlamydophila psittaci 6BC] gi|328815094|gb|EGF85083.1| recombination protein RecR [Chlamydophila psittaci Cal10] gi|328914675|gb|AEB55508.1| recombination protein RecR [Chlamydophila psittaci 6BC] Length = 200 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 3/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI L ++PG G ++A + L+ + L + +A + + C C Sbjct: 4 YPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSELSAARSHCPTCFC 63 Query: 66 VDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + + C+ C + RD S++ +V D++ALERS+ Y+VLG LSP+ + Sbjct: 64 LKSHPESLCSFCQN-NRDTSILCIVATPKDIFALERSQIFKGHYYVLGALLSPITGKHID 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE K +E+I A+ AT+EG TA ++ +L + I+RLA G+P+G Sbjct: 123 AERMHLLKQRIEFLKPKEIILALDATLEGDATALFLKQELSHSSISISRLALGLPIGLSF 182 Query: 184 DYLDDGTIFEAIRSRTV 200 DY+D GT+ A R Sbjct: 183 DYIDSGTLARAFSGRNP 199 >gi|239907165|ref|YP_002953906.1| recombination protein RecR [Desulfovibrio magneticus RS-1] gi|239797031|dbj|BAH76020.1| recombination protein RecR [Desulfovibrio magneticus RS-1] Length = 204 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MQKKITGK-EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + T + L+ LA++PG GP+SA + + L++ L EA+ + ++CL Sbjct: 1 MASQTTLPVPLAELVDQLAKLPGLGPKSALKVAMTLLEWPRPRADGLGEAILRLRERLCL 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C ++ T C +C D R+ + +V + +E + Y VLGG L PL+ Sbjct: 61 CVHCASLSETPVCPVCADPSRNGEQLCLVAQWDAIMQMEETGLYAGRYLVLGGLLDPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177 + P + + L ++ + E I A+ AT+ +TTA +I + L+ V++TRLA GI Sbjct: 121 VSPGQLRLDVLRAKLAEGAVTECILALGATLAAETTASHIKNLLEREFPAVRLTRLAQGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G+E+ Y+D T+ +++R R L Sbjct: 181 PLGAEVKYVDKETLSQSLRYRQDL 204 >gi|154484286|ref|ZP_02026734.1| hypothetical protein EUBVEN_01998 [Eubacterium ventriosum ATCC 27560] gi|149734763|gb|EDM50680.1| hypothetical protein EUBVEN_01998 [Eubacterium ventriosum ATCC 27560] Length = 163 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 95/163 (58%), Gaps = 1/163 (0%) Query: 38 KKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWAL 97 ++ + LA +M + V C C + D C IC ++RD I+VVE D+ A Sbjct: 1 MPKEQVESLANSMIDAKKNVRYCKCCYTLTDQDICPICSSKERDHKTIMVVETTKDMAAY 60 Query: 98 ERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAH 157 E+ +YH+L G+++P+ IG DI ++ L ER+ + E+I A ++++EG+ TA Sbjct: 61 EKIGEYKGVYHILHGAINPMAGIGQNDIKLKELFERL-KDDVNEVIIATNSSVEGEATAM 119 Query: 158 YIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 YI +K + +K+TR+A G+P+G +L+Y+D+ T+ A++ R Sbjct: 120 YITKVIKPLGIKVTRIASGVPVGGDLEYVDNVTLLRALQGRVT 162 >gi|15604961|ref|NP_219745.1| recombination protein RecR [Chlamydia trachomatis D/UW-3/CX] gi|76788962|ref|YP_328048.1| recombination protein RecR [Chlamydia trachomatis A/HAR-13] gi|237802663|ref|YP_002887857.1| recombination protein RecR [Chlamydia trachomatis B/Jali20/OT] gi|237804585|ref|YP_002888739.1| recombination protein RecR [Chlamydia trachomatis B/TZ1A828/OT] gi|255311041|ref|ZP_05353611.1| recombination protein RecR [Chlamydia trachomatis 6276] gi|255317342|ref|ZP_05358588.1| recombination protein RecR [Chlamydia trachomatis 6276s] gi|6685837|sp|O84243|RECR_CHLTR RecName: Full=Recombination protein recR gi|123607037|sp|Q3KMC2|RECR_CHLTA RecName: Full=Recombination protein recR gi|3328650|gb|AAC67833.1| Recombination Protein [Chlamydia trachomatis D/UW-3/CX] gi|76167492|gb|AAX50500.1| RecR [Chlamydia trachomatis A/HAR-13] gi|231272885|emb|CAX09796.1| recombination protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231273897|emb|CAX10689.1| recombination protein [Chlamydia trachomatis B/Jali20/OT] gi|296435756|gb|ADH17930.1| recombination protein RecR [Chlamydia trachomatis G/9768] gi|296436680|gb|ADH18850.1| recombination protein RecR [Chlamydia trachomatis G/11222] gi|296437616|gb|ADH19777.1| recombination protein RecR [Chlamydia trachomatis G/11074] gi|297140115|gb|ADH96873.1| recombination protein RecR [Chlamydia trachomatis G/9301] gi|297748370|gb|ADI50916.1| RecR [Chlamydia trachomatis D-EC] gi|297749250|gb|ADI51928.1| RecR [Chlamydia trachomatis D-LC] Length = 200 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 3/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L ++PG G +SA + L++ + +A+A+ CS C Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMAQALQEFSTSHATCSNCFC 63 Query: 66 --VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + T PC C + RD+S + +V D++ALE+SK Y VLG LSP+ Sbjct: 64 LKISQTSPCNFCS-ESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLS 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G Sbjct: 123 LEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSF 182 Query: 184 DYLDDGTIFEAIRSR 198 D++D T+ A R Sbjct: 183 DFVDANTLARAFSGR 197 >gi|206896103|ref|YP_002246821.1| recombination protein RecR [Coprothermobacter proteolyticus DSM 5265] gi|206738720|gb|ACI17798.1| recombination protein RecR [Coprothermobacter proteolyticus DSM 5265] Length = 201 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 4/194 (2%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT- 68 +E L K R+PG GPR+A + + + ++ + N ++ LC C N+ Sbjct: 3 LEELSKQFRRLPGVGPRTAEKMAYYWLTLEDDEAERFLRTLENFRRQITLCKRCHNLAVG 62 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 +D C IC D +R I+VVE D+ +E++ + YHVL G +SP + PE + I Sbjct: 63 SDLCNICQDNRR-DKAIVVVETPQDVENIEQAGIYHGYYHVLHGLISPRKGVTPEQLFIS 121 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDYL 186 L +RI + I ++I A S T+EG TA Y+ +LK ++ I RL G+P+G EL+Y Sbjct: 122 DLFDRIVDEGITQVIIATSFTMEGDITADYLAKQLKTLQPNIPIYRLGTGLPVGGELNYA 181 Query: 187 DDGTIFEAIRSRTV 200 D T+ A ++ Sbjct: 182 DKATLRAAFITKQK 195 >gi|6093947|sp|O30823|RECR_HAEDU RecName: Full=Recombination protein recR gi|2407232|gb|AAC46216.1| recombinational DNA repair protein [Haemophilus ducreyi] Length = 174 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 1/170 (0%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD-ASVIIVVE 89 HL+++ LA+A+ + C+ C + C IC + +R + + +VE Sbjct: 1 MAYHLLQRNRNGGLNLAKALNEAMTHIGHCNACRTFTEEEECTICKNPRRQISGQLCIVE 60 Query: 90 DVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149 D+ A+E++ + Y VL G LSPLD IGP +IG+ L +R+E + E+I A + T Sbjct: 61 MPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQQRLEQESFHEIILATNPT 120 Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 IEG TA+YI + +VK+TR+A+GIP+G L+ +D T+ + R Sbjct: 121 IEGDATANYIAEICHLYNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRR 170 >gi|294789273|ref|ZP_06754511.1| recombination protein RecR [Simonsiella muelleri ATCC 29453] gi|294482698|gb|EFG30387.1| recombination protein RecR [Simonsiella muelleri ATCC 29453] Length = 197 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 5/201 (2%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M T LI L +P G ++A+R L+ L++A+ N ++ C Sbjct: 1 MSNAYT-----QLIHALKILPNVGNKTAQRMAHTLLHTNRDGAAQLSQAIENALKQIHNC 55 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C + + CAIC + QRDAS +++V+ AD+ A+E ++ + LY VL G ++P + Sbjct: 56 QLCHDFCEGELCAICANPQRDASRLMIVQMPADIAAMEAARCHDGLYFVLMGQVNPSQEM 115 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I ++ LI R+ + E+I A + T EG TA+ + + K KI+RLA G+P+G Sbjct: 116 DLRSIALEQLIARLSGSSVEEIIIATAHTAEGDATAYILAELFKNQHYKISRLARGMPLG 175 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SEL+Y+D GT+ +A+ R +L Sbjct: 176 SELEYVDAGTLAQAVYDRNLL 196 >gi|15618219|ref|NP_224504.1| recombination protein RecR [Chlamydophila pneumoniae CWL029] gi|15835834|ref|NP_300358.1| recombination protein RecR [Chlamydophila pneumoniae J138] gi|16752740|ref|NP_445007.1| recombination protein RecR [Chlamydophila pneumoniae AR39] gi|33241643|ref|NP_876584.1| recombination protein RecR [Chlamydophila pneumoniae TW-183] gi|6685852|sp|Q9Z8N9|RECR_CHLPN RecName: Full=Recombination protein recR gi|4376575|gb|AAD18448.1| Recombination Protein [Chlamydophila pneumoniae CWL029] gi|7189381|gb|AAF38296.1| recombination protein RecR [Chlamydophila pneumoniae AR39] gi|8978673|dbj|BAA98509.1| recombination protein [Chlamydophila pneumoniae J138] gi|33236152|gb|AAP98241.1| RecR [Chlamydophila pneumoniae TW-183] gi|269303174|gb|ACZ33274.1| recombination protein RecR [Chlamydophila pneumoniae LPCoLN] Length = 200 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 3/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI L ++PG G ++A + L+ + L L A N+ ++ C +C Sbjct: 4 YPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPLCFT 63 Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + C C ++RD + +V D++ LERSK YHVLG LSP+ E Sbjct: 64 LKESKEADCHFCR-EERDNQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKHIE 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + + L RIE +E+I AI AT+EG TA ++ +L+ V I+RLA G+P+G Sbjct: 123 NERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQELQHFSVNISRLALGLPIGLSF 182 Query: 184 DYLDDGTIFEAIRSRTV 200 DY+D GT+ A R Sbjct: 183 DYVDSGTLARAFSGRHS 199 >gi|15828522|ref|NP_325882.1| recombination protein RecR [Mycoplasma pulmonis UAB CTIP] gi|20139646|sp|Q98RF8|RECR_MYCPU RecName: Full=Recombination protein recR gi|14089464|emb|CAC13224.1| RECOMBINATION PROTEIN RECR [Mycoplasma pulmonis] Length = 191 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 4/195 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + I+NLI L ++PG G + A + + L+K+ E + + ++ ++ + C C Sbjct: 1 MKNQYIDNLILNLKKLPGVGTKQAEKISFFLLKQNENEVEQIINSIVDLKKNIKECQNCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + + C C+D+ R +++ E +D E+ Y ++ + + Sbjct: 61 FLQSNNICHFCMDKSR-NKQLMIFETTSDALKFEKLGIYRGKYFIIKNLIENVKNANEPK 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L E+I A++ TIEGQ T++YI L+ + +K+T+LA G+P+ S++D Sbjct: 120 WKDKLL---HYASNFEEIIIALNPTIEGQITSNYIKVILEEVALKVTKLAQGLPINSQID 176 Query: 185 YLDDGTIFEAIRSRT 199 Y+D T+ + +R Sbjct: 177 YIDPITLNLSFENRK 191 >gi|212704317|ref|ZP_03312445.1| hypothetical protein DESPIG_02372 [Desulfovibrio piger ATCC 29098] gi|212672279|gb|EEB32762.1| hypothetical protein DESPIG_02372 [Desulfovibrio piger ATCC 29098] Length = 204 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 119/205 (58%), Gaps = 5/205 (2%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M +I + + L++ LAR+PG GP+SA R + L+K E L + + ++ + + LC Sbjct: 1 MHSQI-PEPLRALVEQLARLPGLGPKSAMRVAMTLLKWPEAETRRLGKGIHDLRDNLHLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CG + TDPC IC D+ R + +V + + L+ + Y +LGG L+PL + Sbjct: 60 SRCGGLSATDPCDICKDENRSRDTLCLVNEWDSMLTLDEGGFYHGQYMILGGLLAPLANM 119 Query: 121 --GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYG 176 D+ + LI R+E +IRELI A+ ATI+ + TA +I + ++ ++++RLA G Sbjct: 120 DSDSLDLDLDRLISRLEEGEIRELILALGATIDAENTASFIRNLVRKRFPHIRVSRLAQG 179 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 IP+G+E+ Y+D T+ ++++ R + Sbjct: 180 IPLGAEVKYMDRETLRQSLQYRQDI 204 >gi|94987360|ref|YP_595293.1| recombinational DNA repair protein [Lawsonia intracellularis PHE/MN1-00] gi|94731609|emb|CAJ54972.1| Recombinational DNA repair protein (RecF pathway) ref|ZP_00131299.1| 353: Recombinational DNA repair protein (RecF pathway) [Lawsonia intracellularis PHE/MN1-00] Length = 203 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 117/203 (57%), Gaps = 3/203 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + I + + +I L ++PG GP+SA R + +K E L +++ + +K+ LC Sbjct: 1 MDQHI-PEILRTVIGQLTKLPGLGPKSAMRIAMTFLKWPESETRSLGKSIYELRDKLGLC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CG + ++ C +C D +R +++ +V + + LE Y +LGG L+PLD + Sbjct: 60 SSCGALSDSNLCFVCADSERLDNLLCIVSEWDSMVTLEEVGFFQGRYMILGGLLAPLDNM 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178 G + + I LI+R+ +++E+I A+ +TIE +TTA I + +++TRLA GIP Sbjct: 120 GLDKLEIDRLIDRLNKGEVKEVILALGSTIEAETTATMIYSLISKRFPYIRVTRLAQGIP 179 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +G+E+ ++D T+ ++++ R L Sbjct: 180 LGAEVKFMDRETLRQSLQYRQEL 202 >gi|283850681|ref|ZP_06367968.1| recombination protein RecR [Desulfovibrio sp. FW1012B] gi|283573924|gb|EFC21897.1| recombination protein RecR [Desulfovibrio sp. FW1012B] Length = 204 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 1 MQKKIT-GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + T + L++ LA++PG GP+SA + + L++ L + + + ++CL Sbjct: 1 MAAQTTLPAPLVELVEQLAKLPGLGPKSALKVAMTLLEWPRSRADSLGDGILRLRERLCL 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS C + T C +C D R + +V + LE + Y VLGG L PL+ Sbjct: 61 CSRCAGLSETPVCPVCADPTRRPEELCLVSQWDSVMLLEETAQFGGYYLVLGGLLDPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGI 177 + P + + +L R+ + E I A+ AT+ ++TA +I + L + V++TRLA GI Sbjct: 121 VTPGQLRLDALRARLAEGAVTECILALGATLAAESTASHIKNLLAREFPGVRLTRLAQGI 180 Query: 178 PMGSELDYLDDGTIFEAIRSRTVL 201 P+G+E+ Y+D T+ +++R R L Sbjct: 181 PLGAEVKYVDKETLSQSLRFRQDL 204 >gi|303245253|ref|ZP_07331537.1| recombination protein RecR [Desulfovibrio fructosovorans JJ] gi|302493102|gb|EFL52964.1| recombination protein RecR [Desulfovibrio fructosovorans JJ] Length = 204 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 + L++ LAR+PG GP+SA + + L++ L E + + ++CLCS C + Sbjct: 8 PAPLVELVEQLARLPGLGPKSALKVAMTLLEWPRGRAETLGEGILRLRERLCLCSRCFGL 67 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 T C +C D RD+ + +V + LE + Y VLGG L PLD + P ++ Sbjct: 68 SETPVCPVCADPSRDSRQLCIVAQWDSIMLLEETAQFGGYYLVLGGLLDPLDGVTPGNLR 127 Query: 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSELD 184 + +L R+ I E I A+ AT+ ++TA +I + L + +V++TRLA GIP+G+E+ Sbjct: 128 LDALRARLREGDIAECILALGATLAAESTASHIKNLLAREFPNVRLTRLAQGIPLGTEVK 187 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D T+ +++R R L Sbjct: 188 YVDKETLSQSLRYRQDL 204 >gi|62185098|ref|YP_219883.1| recombination protein RecR [Chlamydophila abortus S26/3] gi|73621477|sp|Q5L609|RECR_CHLAB RecName: Full=Recombination protein recR gi|62148165|emb|CAH63922.1| recombination protein [Chlamydophila abortus S26/3] Length = 200 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 3/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI +L ++PG G ++A + L+ + L + +A + + C C Sbjct: 4 YPDYLSKLISLLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSELSAARSHCPTCFC 63 Query: 66 VDTTDP--CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + + C+ C + RD S++ +V D+++LERS+ Y+VLG LSP+ + Sbjct: 64 LKSHPESVCSFCQN-NRDTSILCIVATPKDIFSLERSQIFQGHYYVLGALLSPITGRHID 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE K +E+I A+ AT+EG TA ++ +L ++RLA G+P+G Sbjct: 123 AERMHLLKQRIEFLKPKEIILALDATLEGDATALFLKQELSHSSASVSRLALGLPIGLSF 182 Query: 184 DYLDDGTIFEAIRSRTV 200 DY+D GT+ A R Sbjct: 183 DYIDSGTLARAFSGRNP 199 >gi|296438547|gb|ADH20700.1| recombination protein RecR [Chlamydia trachomatis E/11023] Length = 200 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 3/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L ++PG G +SA + L++ + +A A+ CS C Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMALALQEFSTSHATCSNCFC 63 Query: 66 --VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + T PC C + RD+S + +V D++ALE+SK Y VLG LSP+ Sbjct: 64 LKISQTSPCNFCS-ESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLS 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G Sbjct: 123 LEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSF 182 Query: 184 DYLDDGTIFEAIRSR 198 D++D T+ A R Sbjct: 183 DFVDANTLARAFSGR 197 >gi|270285301|ref|ZP_06194695.1| recombination protein RecR [Chlamydia muridarum Nigg] gi|270289318|ref|ZP_06195620.1| recombination protein RecR [Chlamydia muridarum Weiss] gi|301336698|ref|ZP_07224900.1| recombination protein RecR [Chlamydia muridarum MopnTet14] gi|13878697|sp|Q9PKF4|RECR_CHLMU RecName: Full=Recombination protein recR Length = 200 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 3/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L ++PG G +SA + L++ + + AM C C Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFC 63 Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + T T C C + RD+S + +V D+++ E+SK Y VLG LSP+ Sbjct: 64 LKTSKTSSCDFCS-ESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLS 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G Sbjct: 123 LEKLNILKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMPVGLSF 182 Query: 184 DYLDDGTIFEAIRSR 198 D++D T+ A R Sbjct: 183 DFIDSNTLARAFSGR 197 >gi|15835129|ref|NP_296888.1| recombination protein RecR [Chlamydia muridarum Nigg] gi|7190550|gb|AAF39353.1| recombination protein RecR [Chlamydia muridarum Nigg] Length = 203 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 3/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L ++PG G +SA + L++ + + AM C C Sbjct: 7 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFC 66 Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + T T C C + RD+S + +V D+++ E+SK Y VLG LSP+ Sbjct: 67 LKTSKTSSCDFCS-ESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLS 125 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G Sbjct: 126 LEKLNILKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMPVGLSF 185 Query: 184 DYLDDGTIFEAIRSR 198 D++D T+ A R Sbjct: 186 DFIDSNTLARAFSGR 200 >gi|289549262|ref|YP_003474250.1| recombination protein RecR [Thermocrinis albus DSM 14484] gi|289182879|gb|ADC90123.1| recombination protein RecR [Thermocrinis albus DSM 14484] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 116/202 (57%), Gaps = 3/202 (1%) Query: 1 MQ-KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M ++ ++ +++L IP +G RSA R + +K + + + + + Sbjct: 1 MAYQEYIPPVLKRALEVLTYIPTYGERSASRFVYNFLKLSPEERDEILKTLFELSRSARK 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS CG V TDPC IC D +R+ + VVE+ D +A+ER + +YHVLGG ++PL+ Sbjct: 61 CSECGLVSDTDPCRICSDTKRNKRFLCVVEESQDAYAIERLERYTGVYHVLGGRIAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177 I ED+ I+ L+ RIE ++E+I A + +EG+ TA+YI+ +K VK++R+++G+ Sbjct: 121 ISAEDLNIEGLLRRIENYGVKEVILATNPNVEGEATANYILSLIKKRFPSVKVSRISHGL 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 GS ++ DD ++ +I +R Sbjct: 181 QFGSLIELADDLSLERSIENRR 202 >gi|166154451|ref|YP_001654569.1| recombination protein RecR [Chlamydia trachomatis 434/Bu] gi|166155326|ref|YP_001653581.1| recombination protein RecR [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|255348598|ref|ZP_05380605.1| recombination protein RecR [Chlamydia trachomatis 70] gi|255503138|ref|ZP_05381528.1| recombination protein RecR [Chlamydia trachomatis 70s] gi|255506816|ref|ZP_05382455.1| recombination protein RecR [Chlamydia trachomatis D(s)2923] gi|301335710|ref|ZP_07223954.1| recombination protein RecR [Chlamydia trachomatis L2tet1] gi|229890140|sp|B0B7F6|RECR_CHLT2 RecName: Full=Recombination protein recR gi|229890142|sp|B0BBM1|RECR_CHLTB RecName: Full=Recombination protein recR gi|165930439|emb|CAP03932.1| recombination protein [Chlamydia trachomatis 434/Bu] gi|165931314|emb|CAP06886.1| recombination protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|289525279|emb|CBJ14755.1| recombination protein [Chlamydia trachomatis Sweden2] gi|296434827|gb|ADH17005.1| recombination protein RecR [Chlamydia trachomatis E/150] Length = 200 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 3/195 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI L ++PG G +SA + L++ + +A A+ CS C Sbjct: 4 YPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMALALQEFSTSHATCSNCFC 63 Query: 66 --VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + T PC C + RD+S + +V D++ALE+SK Y VLG LSP+ Sbjct: 64 LKISQTSPCNFCS-ESRDSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLS 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + L +RIE +E+I A+ AT+EG TA ++ + + +KI+RLA G+P+G Sbjct: 123 LEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSF 182 Query: 184 DYLDDGTIFEAIRSR 198 D++D T+ A R Sbjct: 183 DFVDANTLARAFSGR 197 >gi|313682513|ref|YP_004060251.1| DNA replication and repair protein recr [Sulfuricurvum kujiense DSM 16994] gi|313155373|gb|ADR34051.1| DNA replication and repair protein RecR [Sulfuricurvum kujiense DSM 16994] Length = 189 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 12/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M++ + ++ L+ L +P G +SA R H+V LA A+ N + C Sbjct: 1 MKRSL--EKFNRLVDALQNLPTVGQKSATRLAYHMVMNDSFGALKLAHAIENAITSLKKC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C+IC D++R+ V+ +VE+ D+ E + + Y VL Sbjct: 59 RSCGGLSEDELCSICSDERRNHEVLCIVENAKDILTFEENGLFDGRYFVLDS-------- 110 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + + + + I+E+IFA++ +I Q YI DKL DV+ +R+A G+P G Sbjct: 111 --IEELDIAHLRGVIQSGIKEVIFALTPSIANQGVMLYIEDKLIDCDVRFSRIAQGVPTG 168 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ R + Sbjct: 169 VSLENVDILSLTKAMEDRVSI 189 >gi|89898331|ref|YP_515441.1| recombination protein RecR [Chlamydophila felis Fe/C-56] gi|123483333|sp|Q254J2|RECR_CHLFF RecName: Full=Recombination protein recR gi|89331703|dbj|BAE81296.1| recombination and repair [Chlamydophila felis Fe/C-56] Length = 200 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 3/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI L ++PG G ++A + L+ ++ L L +A + + C C Sbjct: 4 YPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPCCFC 63 Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + C C + RD S + +V D+++LERS+ Y+VLG LSPL E Sbjct: 64 LKNFPESQCEFCQN-NRDTSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKHIE 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + ++ L +RIE +E+I A+ AT+EG TA ++ +L I+RLA G+P+G Sbjct: 123 EERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQELAYSLASISRLALGLPIGLSF 182 Query: 184 DYLDDGTIFEAIRSRTV 200 DY+D GT+ A R Sbjct: 183 DYIDSGTLARAFSGRNP 199 >gi|302343840|ref|YP_003808369.1| recombination protein RecR [Desulfarculus baarsii DSM 2075] gi|301640453|gb|ADK85775.1| recombination protein RecR [Desulfarculus baarsii DSM 2075] Length = 192 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 1/184 (0%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 L R+PG G ++A R LHL + + + LA A+A + +V C+ C N+ DPCAIC Sbjct: 3 ALCRLPGIGRKTAERLALHLARARPEEARALAAAVARVGAEVNTCARCRNLADRDPCAIC 62 Query: 76 IDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIE 135 D RD+ ++ VVE ADL A+E + A LY VL G+LSPLD +GP +G+ +L R Sbjct: 63 ADPARDSGLLCVVESPADLAAMEAAGAYRGLYFVLSGALSPLDGVGPGQLGLDALTRRA- 121 Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAI 195 + +RELI A ++T+EG+ TA + L + I+RL YG+P+G +L Y+D TI A+ Sbjct: 122 AEGVRELIIATNSTVEGEATADLVAQSLARPGLLISRLGYGMPVGGDLKYIDGLTIARAL 181 Query: 196 RSRT 199 SR Sbjct: 182 ESRR 185 >gi|283956658|ref|ZP_06374137.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 1336] gi|283791907|gb|EFC30697.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 1336] Length = 190 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + ++ L++ A +P G ++A R HL + LA + N + C Sbjct: 1 MAKGL--EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D++R+ +++ +VE D+ LE S++ N LY VL Sbjct: 59 EQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVLDEL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + ++ L + I I ELIFA++ +I T +I DK K +++ +++A GIP G Sbjct: 112 --NEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIAQGIPSG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ RT + Sbjct: 170 VNLENVDLISLNKAMNFRTKI 190 >gi|152990929|ref|YP_001356651.1| recombination protein RecR [Nitratiruptor sp. SB155-2] gi|172048733|sp|A6Q485|RECR_NITSB RecName: Full=Recombination protein recR gi|151422790|dbj|BAF70294.1| DNA recombination protein RecR [Nitratiruptor sp. SB155-2] Length = 190 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ K+ K+ NL++ L +P G +SA R H+V LA A+ + + + C Sbjct: 1 MKGKL--KKFYNLVEALETLPSIGKKSAGRLAFHMVLHSPMDALKLAHAIEDAVSSIHRC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + CG + + C IC D+ RD S + +VE D++ +E S + LY V Sbjct: 59 TQCGGLSEDELCYICSDELRDRSSLCLVESARDIYVIEESGEYHGLYFVFESL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + + +L E I+ ++E+IFA + +++ T YI D+L+ + T++A G+P G Sbjct: 112 --NERILANLKEMIKNNGVQEIIFAFTPSMQSDATMLYIEDQLQEFHLHFTKIAQGVPTG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +AI R + Sbjct: 170 VHLENVDMLSLSKAISERVKI 190 >gi|283954827|ref|ZP_06372343.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 414] gi|283793667|gb|EFC32420.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 414] Length = 190 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + ++ L++ A +P G ++A R H+ + LA + N + C Sbjct: 1 MAKGL--EKFNELVESFANLPTIGKKTAIRLAYHICTNNQIDGMKLAHNIENAIRFIKPC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D++RD +++ +VE D+ LE SK+ N Y VL Sbjct: 59 EQCGALSENEFCEICSDKERDKNILCIVESPKDILTLEESKSYNGFYFVLDEL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + ++ L + I ELIFA++ +I T +I DK K +++ +++A GIP G Sbjct: 112 --NEEKLEKLKQIILKLNTSELIFALTHSINSDATIFFIEDKFKHLNLSFSKIAQGIPSG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ RT + Sbjct: 170 VNLENVDLISLNKAMNFRTKI 190 >gi|152993460|ref|YP_001359181.1| recombination protein RecR [Sulfurovum sp. NBC37-1] gi|151425321|dbj|BAF72824.1| DNA recombination protein RecR [Sulfurovum sp. NBC37-1] Length = 189 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 11/200 (5%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K + ENL++ P G +SA R H V + LA A+ N + CS Sbjct: 1 MKNYKIEAFENLVEAFGSFPSIGKKSAIRLAYHSVMEDGFAAMKLAHAIETAVNSIHKCS 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C N+ + C+IC D RD + + +V+ D+ +E S + +Y+V+ Sbjct: 61 KCHNMSEDELCSICSDPYRDTAKLCIVQSAKDILTIEESGQFDGVYYVISEVR------- 113 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 D+ L + + + E+IFA +I T YI DKL+G+ + T++A G+P G Sbjct: 114 --DLDEAHLFYAV--EGVEEIIFAFPPSIATDTMILYIEDKLQGLPISFTKIAQGVPTGV 169 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 EL+ +D ++ A+ +R + Sbjct: 170 ELENIDIMSLSRALEARVKI 189 >gi|296273166|ref|YP_003655797.1| recombination protein RecR [Arcobacter nitrofigilis DSM 7299] gi|296097340|gb|ADG93290.1| recombination protein RecR [Arcobacter nitrofigilis DSM 7299] Length = 190 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K+ + +L++ +P G +SA+R H++ +A ++ N + CS Sbjct: 1 MKLGLNKFYDLVEAFENLPTIGKKSAQRLAYHIIMNDNYCGIKIAHSIENALKSIRKCSK 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + + C IC+D +R++S I VV+ D++ +E SK N Y V+ Sbjct: 61 CGCMSEHEICEICLDDERESSFICVVQSAKDIFTIEESKQFNGKYFVISHL--------- 111 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 ++I + I I+ K+++++FAIS ++ +I DKLK D+ T++A G+P G Sbjct: 112 DEIVLDQFITYIKTNKVKDILFAISPSLSNDAFILFIEDKLKEFDINFTKIAQGVPTGVS 171 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +AI+S+ ++ Sbjct: 172 LENVDILSLAKAIQSKVLI 190 >gi|29840243|ref|NP_829349.1| recombination protein RecR [Chlamydophila caviae GPIC] gi|33301498|sp|Q823D7|RECR_CHLCV RecName: Full=Recombination protein recR gi|29834591|gb|AAP05227.1| recombination protein RecR [Chlamydophila caviae GPIC] Length = 200 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 3/197 (1%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + LI +L ++PG G ++A + L+ + L + +A + + CS C Sbjct: 4 YPDYLSKLISLLRKLPGIGFKTAEKLAFELLDWDQDQLEAMGQAFSEVSAARSHCSTCFC 63 Query: 66 VDT--TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + C C + RD S + +V D+++LERS+ Y+VLG LSP+ + Sbjct: 64 LKNLPESNCEFCQN-NRDTSTLCIVATPKDIFSLERSQIFKGHYYVLGTLLSPITGKHID 122 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 I L +RIE K +E+I A+ AT+EG TA ++ +L I+RLA G+P+G Sbjct: 123 VERIGLLKQRIEFLKPQEIILALDATLEGDATALFLKQELAFSSASISRLALGLPIGLSF 182 Query: 184 DYLDDGTIFEAIRSRTV 200 DY+D GT+ A R Sbjct: 183 DYVDSGTLARAFSGRNP 199 >gi|222475000|ref|YP_002563415.1| recombination protein (recR) [Anaplasma marginale str. Florida] gi|222419136|gb|ACM49159.1| recombination protein (recR) [Anaplasma marginale str. Florida] Length = 170 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 78/169 (46%), Positives = 116/169 (68%) Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92 +HL++ ++ ++ PLA + + C+IC N+DT PC+IC D+ RD S+I VVE++ Sbjct: 1 MHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDTISPCSICSDKGRDQSIICVVEELG 60 Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEG 152 DLWA ER + + +YHVLGG+LS L IGPED+ + +++RI ++E+I A S ++G Sbjct: 61 DLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLGGIVDRIRTHGVKEVIVATSNDMDG 120 Query: 153 QTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 Q T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+ Sbjct: 121 QVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 169 >gi|86150705|ref|ZP_01068921.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 260.94] gi|121613624|ref|YP_001000939.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 81-176] gi|148926257|ref|ZP_01809942.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8486] gi|167005850|ref|ZP_02271608.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 81-176] gi|205356281|ref|ZP_03223047.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315124720|ref|YP_004066724.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|166221929|sp|A1W0P8|RECR_CAMJJ RecName: Full=Recombination protein recR gi|85841875|gb|EAQ59121.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 260.94] gi|87249985|gb|EAQ72944.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 81-176] gi|145845428|gb|EDK22521.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205345886|gb|EDZ32523.1| recombination protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284926488|gb|ADC28840.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni IA3902] gi|315018442|gb|ADT66535.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 190 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 9/194 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ A +P G ++A R HL + LA + N + C CG + Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D++R+ +++ +VE D+ LE S++ N LY VL + + Sbjct: 66 ENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVLDEL---------NEEKL 116 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVD 176 Query: 188 DGTIFEAIRSRTVL 201 ++ +A+ RT + Sbjct: 177 LISLNKAMNFRTKI 190 >gi|86150596|ref|ZP_01068819.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596287|ref|ZP_01099524.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 84-25] gi|218562875|ref|YP_002344654.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|20139828|sp|Q9PN35|RECR_CAMJE RecName: Full=Recombination protein recR gi|85838947|gb|EAQ56213.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191128|gb|EAQ95100.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 84-25] gi|112360581|emb|CAL35378.1| recombination protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927111|gb|EFV06462.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929717|gb|EFV08891.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 305] Length = 190 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 9/194 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ A +P G ++A R HL + LA + N + C CG + Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D++R+ +++ +VE D+ LE S++ N LY VL + + Sbjct: 66 ENELCEICSDKERNKNILCIVESPKDILTLEESQSYNGLYFVLDEL---------NEEKL 116 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVD 176 Query: 188 DGTIFEAIRSRTVL 201 ++ +A+ RT + Sbjct: 177 LISLNKAMNFRTKI 190 >gi|153951682|ref|YP_001397647.1| recombination protein RecR [Campylobacter jejuni subsp. doylei 269.97] gi|171769455|sp|A7H2B7|RECR_CAMJD RecName: Full=Recombination protein recR gi|152939128|gb|ABS43869.1| recombination protein RecR [Campylobacter jejuni subsp. doylei 269.97] Length = 190 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + ++ L++ A +P G ++A R HL + LA + N + C Sbjct: 1 MAKGL--EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D++R +++ +VE D+ LE S++ N LY VL Sbjct: 59 EQCGALSENELCEICSDEERSKNILCIVESPKDILTLEESQSYNGLYFVLDEL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + ++ L + + I ELIFA++ +I T +I DK K +++ +++A GIP G Sbjct: 112 --NEEKLEKLKQILLKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIAQGIPSG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ RT + Sbjct: 170 VNLENVDLISLNKAMNFRTKI 190 >gi|57242137|ref|ZP_00370077.1| recombination protein RecR [Campylobacter upsaliensis RM3195] gi|57017329|gb|EAL54110.1| recombination protein RecR [Campylobacter upsaliensis RM3195] Length = 192 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ A +P G ++A R L++ + L+ + N + C CG + Sbjct: 7 EKFNELVESFANLPTIGKKTAIRLALYICMQNPLEGMKLSHNIENALRFIKSCKQCGALS 66 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D QRD ++I +VE+ D+ LE S N Y VL + + Sbjct: 67 ENELCEICTDTQRDENLICLVENAKDILILEESGGYNGFYFVLNEL---------NEEKL 117 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L IE K +ELIFA++ ++ T +I + LK +++K++++A GIP G L+ +D Sbjct: 118 SKLKAMIEKLKSKELIFALTHSVHSDATIFFIEENLKNLELKLSKIAQGIPSGVNLENVD 177 Query: 188 DGTIFEAIRSRTVL 201 ++ A+ RT + Sbjct: 178 FISLHRAMNFRTKI 191 >gi|332295104|ref|YP_004437027.1| Recombination protein recR [Thermodesulfobium narugense DSM 14796] gi|332178207|gb|AEE13896.1| Recombination protein recR [Thermodesulfobium narugense DSM 14796] Length = 203 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 7/202 (3%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 K + +L L+ +PG GP+ A R + ++ E+ L EA+ N+ + CS C Sbjct: 3 YPKPLSDLSHELSLLPGIGPKLALRLAFFISQRGEEKNLSLIEALQNLK-NIKKCSQCNA 61 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + TDPC IC D R+ ++ VV DV DLW +E +K+ + Y VL + PL+ I PE Sbjct: 62 LSETDPCEICSDPSRNNEILCVVSDVRDLWKIESTKSYSGRYFVLNSLIVPLEGIDPEKA 121 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK------GIDVKITRLAYGIPM 179 G+ L I KK +E++ A ++EGQTT+ YI ++L G ++TRLA G+ M Sbjct: 122 GMTELFSLIRAKKPKEIVIAFDFSMEGQTTSLYIKERLSSQRDQLGYIPQLTRLAVGLSM 181 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G L D+ TI +AI R + Sbjct: 182 GDNLGNTDEFTISQAILHRQKI 203 >gi|325266073|ref|ZP_08132759.1| recombination protein R [Kingella denitrificans ATCC 33394] gi|324982711|gb|EGC18337.1| recombination protein R [Kingella denitrificans ATCC 33394] Length = 207 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 110/201 (54%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K T LI+ L +P G ++A+R L+++ + LA A+ +V C Sbjct: 1 MTTKKTTNAYTALIQALRILPNVGAKTAQRMAHTLLQENREGAAELAAALDTALKQVSNC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C C IC D+ RD + +++V AD+ A+E ++ + LY VL G +SP + Sbjct: 61 QSCNTFCEGGTCEICADETRDPTRLMIVHMPADVAAMEAARCHDGLYFVLMGQVSPAQNM 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 I ++ LI R+ + E+I A S T EG TA+ + + LKG KI+RLA G+P+G Sbjct: 121 DLGSIALEKLIARLAGSPVTEIIIATSFTAEGDATAYILSELLKGQPYKISRLARGMPLG 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 SEL+Y+D GT+ +A+ R++L Sbjct: 181 SELEYVDAGTLAQAVYERSLL 201 >gi|86152659|ref|ZP_01070864.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni HB93-13] gi|157415527|ref|YP_001482783.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 81116] gi|172047168|sp|A8FMW9|RECR_CAMJ8 RecName: Full=Recombination protein recR gi|85843544|gb|EAQ60754.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni HB93-13] gi|157386491|gb|ABV52806.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 81116] gi|307748167|gb|ADN91437.1| Recombination protein recR [Campylobacter jejuni subsp. jejuni M1] gi|315932412|gb|EFV11355.1| recombination protein RecR [Campylobacter jejuni subsp. jejuni 327] Length = 190 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + ++ L++ A +P G ++A R HL + LA + N + C Sbjct: 1 MAKGL--EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D++R+ +++ +VE D+ LE S++ N LY VL Sbjct: 59 GQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVLDEL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + ++ L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G Sbjct: 112 --NEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +A+ RT + Sbjct: 170 VNLENVDLISLNKAMNFRTKI 190 >gi|261885550|ref|ZP_06009589.1| recombination protein RecR [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 189 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 12/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + K L+ +IPG G +SA + H+ + LA + + + C Sbjct: 1 MPNQKLEK-FNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLNLAHTIEDAVRFLKHC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S+CG + + C IC D RD + +VE D+ +E S ++N LY V + Sbjct: 60 SMCGGISENEICDICSDINRDKRSLCIVETPKDILPIEYSHSLNGLYFVFDDA------- 112 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + L I+ I+EL+FA++ +I YI DKLK DV T++A GIP G Sbjct: 113 ----NKLDKLKSNIKENGIKELLFALTRSINSDGMMLYIEDKLKDFDVSFTKIAQGIPTG 168 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +AI+ R L Sbjct: 169 VSLENVDILSLTKAIKDRRSL 189 >gi|47458910|ref|YP_015772.1| recombination protein RecR [Mycoplasma mobile 163K] gi|47458238|gb|AAT27561.1| recombination protein [Mycoplasma mobile 163K] Length = 196 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 5/197 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K ENL+ L +PG + A + + ++++ K+ +L L +A + + C+ C Sbjct: 1 MNNKTFENLVLSLKELPGISKKQAEKISFYIIQSKKDVLNNLIDAFQKAKSNLVKCNNCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C+ICID+ RD ++ VVE ++ E + + Y V+ + D Sbjct: 61 LISEHQLCSICIDKSRDNKLM-VVESSLEVNKFEDLQIYSGKYFVVDSLIKNFDDKSTYF 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182 + + + E+I A+S T+EG+ +A YI + + K ++KI++LA G+P+GS+ Sbjct: 120 ETYNKIFKIL--PNADEVILALSPTLEGEVSAIYIKNLINEKFPNLKISQLANGLPVGSQ 177 Query: 183 LDYLDDGTIFEAIRSRT 199 ++Y+D T+ A ++R Sbjct: 178 VEYIDSLTLNFAFKNRK 194 >gi|157737536|ref|YP_001490219.1| recombination protein RecR [Arcobacter butzleri RM4018] gi|315637320|ref|ZP_07892538.1| recombination protein R [Arcobacter butzleri JV22] gi|157699390|gb|ABV67550.1| recombination protein RecR [Arcobacter butzleri RM4018] gi|315478363|gb|EFU69078.1| recombination protein R [Arcobacter butzleri JV22] Length = 190 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + ++ L++ +P G +SA R H+V +A ++ N + C Sbjct: 1 MNKGL--EKFYELVEAFESLPTIGKKSALRLAYHIVMNDNYCGIKIAHSIENALKNITKC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CG++ + C C+D+ RD + +V+ D++ +E S + Y V+ Sbjct: 59 SRCGSMSEHEICEFCLDENRDNEKLCIVQSAKDIFVIEDSNQFDGRYFVIEEL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + + SL I ++ ++FAI+ +I +I DKLK D+K T++A G+P G Sbjct: 112 --DQDVLDSLQRFILNNGVKTILFAITPSIANDAFILFIEDKLKDFDIKFTKIAQGVPTG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ +AI+S+ + Sbjct: 170 VSLENVDILSLSKAIQSKVEI 190 >gi|315638146|ref|ZP_07893328.1| recombination protein R [Campylobacter upsaliensis JV21] gi|315481682|gb|EFU72304.1| recombination protein R [Campylobacter upsaliensis JV21] Length = 209 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ A +P G ++A R L++ + L+ + N + C CG + Sbjct: 24 EKFNELVESFANLPTIGKKTAIRLALYICMQNPLEGMKLSHNIENALRFIKSCKQCGALS 83 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D QRD ++I +VE+ D+ LE S N Y VL + + Sbjct: 84 ENELCEICTDTQRDENLICLVENAKDILILEESGGYNGFYFVLNEL---------NEEKL 134 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L IE K +ELIFA++ ++ T +I + LK +++K++++A GIP G L+ +D Sbjct: 135 SKLKAMIEKLKSKELIFALTHSVHSDATIFFIEENLKNLELKLSKIAQGIPSGVNLENVD 194 Query: 188 DGTIFEAIRSRTVL 201 ++ A+ RT + Sbjct: 195 FISLHRAMNFRTKI 208 >gi|163782475|ref|ZP_02177472.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1] gi|159882048|gb|EDP75555.1| recombination protein RecR [Hydrogenivirga sp. 128-5-R1-1] Length = 202 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 117/202 (57%), Gaps = 3/202 (1%) Query: 1 MQ-KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M +++ K ++ ++ + RIP +G R A R +L+K + + ++ K+ Sbjct: 1 MAFEEVFPKSLKLALESVKRIPTYGERGASRLVYNLLKLSPEERELVVSSLTEASEKLKP 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C + + CA+C D +R + VVE+ D +++ER + +YHVL G ++PL+ Sbjct: 61 CKECYLLTEGELCAVCSDPRRSKKFVCVVEESQDAYSIERLERYKGVYHVLQGRIAPLEG 120 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGI 177 + P+D+ I L+ERIE ++RE+I A + EG+ TA+Y+M LK VK+TR++YG+ Sbjct: 121 VSPQDLTIDRLLERIEKNRVREIIIATNPNAEGEATANYLMKLLKDRFPSVKVTRVSYGL 180 Query: 178 PMGSELDYLDDGTIFEAIRSRT 199 GS L+++D+ ++ ++ +R Sbjct: 181 QFGSLLEFVDELSLEKSFENRK 202 >gi|154174630|ref|YP_001407798.1| recombination protein RecR [Campylobacter curvus 525.92] gi|112802205|gb|EAT99549.1| recombination protein RecR [Campylobacter curvus 525.92] Length = 190 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 11/200 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K + ++ L+ ++PG G +SA R + + LA+ + + + C Sbjct: 1 MKKGL--EKFNELVDAFGKLPGVGKKSAARFAYFVSMQDSFAGLRLAQCIEDAARFIKRC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D+ RD S+I +VE D+ E++ LY VL Sbjct: 59 ERCGGLSENEICDICADEARDKSMIAIVESPRDILVFEQNGIYEGLYFVLDEI------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 +D I L IE+ K E+IFA + + Y+ DKL ++K +++A G+P G Sbjct: 112 --DDGAINRLKSMIELNKATEIIFAFTPGLNTDALMLYVEDKLGMSELKFSKIAQGVPTG 169 Query: 181 SELDYLDDGTIFEAIRSRTV 200 L+ +D ++ +A+ SRT Sbjct: 170 VSLENVDMLSLLKALESRTK 189 >gi|57167625|ref|ZP_00366765.1| recombination protein RecR [Campylobacter coli RM2228] gi|305433130|ref|ZP_07402286.1| recombination protein R [Campylobacter coli JV20] gi|57020747|gb|EAL57411.1| recombination protein RecR [Campylobacter coli RM2228] gi|304443831|gb|EFM36488.1| recombination protein R [Campylobacter coli JV20] Length = 191 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ A++P G ++A R H+ + LA + N + C CG++ Sbjct: 7 EKFNELVESFAKLPTIGKKTAIRLAYHICTGNQLEGMKLAHNIENAIRFIKPCQQCGSLS 66 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D +RD + + +V+ D+ +E SK+ LY VL D + Sbjct: 67 ENELCEICTDDERDKNCLCIVQSPKDVLVIEESKSYGGLYFVLDEL---------NDEKL 117 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L + I + +ELIFA + + YI D+LK ++++ +++A GIP G L+ +D Sbjct: 118 AQLRQMILKLQSKELIFAFTHNLNSDAMIFYIEDRLKDLNLQFSKIAQGIPSGVNLENVD 177 Query: 188 DGTIFEAIRSRTV 200 ++ +AI RT Sbjct: 178 FISLNKAINFRTK 190 >gi|57238135|ref|YP_179385.1| recombination protein RecR [Campylobacter jejuni RM1221] gi|73621476|sp|Q5HTK0|RECR_CAMJR RecName: Full=Recombination protein recR gi|57166939|gb|AAW35718.1| recombination protein RecR [Campylobacter jejuni RM1221] gi|315058696|gb|ADT73025.1| Recombination protein RecR [Campylobacter jejuni subsp. jejuni S3] Length = 190 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 9/194 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ A +P G ++A R HL + LA + N + C CG + Sbjct: 6 EKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALS 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D++R+ +++ +VE D+ LE S++ N LY VL + + Sbjct: 66 ENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGLYFVLDEL---------NEEKL 116 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L + I I ELIFA++ +I T +I DK KG+++ +++A GIP G L+ +D Sbjct: 117 EKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGINLENVD 176 Query: 188 DGTIFEAIRSRTVL 201 ++ +A+ RT + Sbjct: 177 LISLNKAMNFRTKI 190 >gi|171920724|ref|ZP_02931938.1| recombination protein RecR [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903469|gb|EDT49758.1| recombination protein RecR [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 201 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 4/202 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + E E L+ L +PG G ++A++ L+++ ++ + + + + + C Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNAKKWAFFLLQQDQKYIDDFIKRIKDAKTNIIKC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N D C IC + RD + +++V DL +E + N LYH+ G +S + Sbjct: 58 KYCSNFGNKDECDICSNDYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEVSLRKNV 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 E I+ + ER+ +E+I A S T +G+ TA YI+ L+ +++I R+ +GIP+ Sbjct: 118 VIEHTNIKIIKERVLNGSFKEIIIATSYTHDGEVTADYIVKMLEDIKNIQIYRIGFGIPL 177 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 S +DY DD T+ ++I ++ + Sbjct: 178 NSSIDYADDETLKQSIANKRKI 199 >gi|185178817|ref|ZP_02964608.1| recombination protein RecR [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024394|ref|ZP_02997057.1| recombination protein RecR [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518705|ref|ZP_03004130.1| recombination protein RecR [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524138|ref|ZP_03004210.1| recombination protein RecR [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867497|ref|ZP_03079501.1| recombination protein RecR [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273388|ref|ZP_03205924.1| recombination protein RecR [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554293|ref|YP_002284514.1| recombination protein RecR [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550632|ref|ZP_03771581.1| recombination protein RecR [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551045|ref|ZP_03771991.1| recombination protein RecR [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|238058669|sp|B5ZAS4|RECR_UREU1 RecName: Full=Recombination protein recR gi|184209448|gb|EDU06491.1| recombination protein RecR [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018663|gb|EDU56703.1| recombination protein RecR [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997707|gb|EDU66804.1| recombination protein RecR [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659812|gb|EDX53192.1| recombination protein RecR [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660973|gb|EDX54226.1| recombination protein RecR [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249908|gb|EDY74688.1| recombination protein RecR [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541794|gb|ACI60023.1| recombination protein RecR [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378860|gb|EEH01225.1| recombination protein RecR [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379786|gb|EEH02148.1| recombination protein RecR [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 201 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 4/202 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + E E L+ L +PG G ++A++ L+++ ++ + + + + + C Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNAKKWAFFLLQQDQKYIDDFIKRIKDAKTNIIKC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N D C IC + RD + +++V DL +E + N LYH+ G +S + Sbjct: 58 KYCSNFGNKDECDICSNDYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEVSLRKNV 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 E I+ + ER+ +E+I A S T +G+ TA YI+ L+ D++I R+ +GIP+ Sbjct: 118 VIEHTNIKIIKERVLNGSFKEIIIATSYTHDGEVTADYIVKMLEDIKDIQIYRIGFGIPL 177 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 S +DY DD T+ ++I ++ + Sbjct: 178 NSSIDYADDETLKQSIANKRKI 199 >gi|224372958|ref|YP_002607330.1| recombination protein RecR [Nautilia profundicola AmH] gi|223589618|gb|ACM93354.1| recombination protein RecR [Nautilia profundicola AmH] Length = 187 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 11/193 (5%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 I LI+ +P G +SA R L + K + L A+ ++ + C ICGN Sbjct: 6 SINRLIEAFEELPSIGKKSATRLALSIAK-DKFKALKLINAIEDVVANIKECEICGNFSE 64 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC + R + +VE+ D+ +E S + N Y VL +D IQ Sbjct: 65 HEICDICASENR-DKTLAIVENSKDIMIIEESGSYNGYYFVLTHI---------DDEVIQ 114 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L E I+ K+I+E+IFA ++E + + YI DKLK ++++ T++A G+P G + +D Sbjct: 115 KLREIIKDKEIKEVIFAFPPSVESEARSLYIEDKLKDLNIEFTQIAQGVPTGVHFENVDV 174 Query: 189 GTIFEAIRSRTVL 201 ++ +AI+ R L Sbjct: 175 NSLAKAIKLRFKL 187 >gi|237752563|ref|ZP_04583043.1| recombination protein RecR [Helicobacter winghamensis ATCC BAA-430] gi|229376052|gb|EEO26143.1| recombination protein RecR [Helicobacter winghamensis ATCC BAA-430] Length = 190 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 9/199 (4%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + L++ L RIP G +SA R L + + +A + ++ C Sbjct: 1 MKSYPESFAKLVESLERIPSVGRKSAMRLAYFLAFEDKFSALQVAHNIECCVQELRTCEE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CG + C IC+D R+ + +V + +++ LE S Y VL Sbjct: 61 CGGITNQAVCEICLDATRNNGELCIVANPREIFLLEESGEFFGKYFVLDSL--------- 111 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 + + ++ L + I E+IFA S ++ + Y+ DKL+ ++ T++A GIP G Sbjct: 112 DKLNLEQLERSVTKFGITEIIFAFSPSLGSDSIMLYLEDKLENFGLRFTKIAQGIPTGVS 171 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D +I A++SR + Sbjct: 172 LENVDQLSIIRALQSRVKI 190 >gi|157164121|ref|YP_001466292.1| recombination protein RecR [Campylobacter concisus 13826] gi|112800886|gb|EAT98230.1| recombination protein RecR [Campylobacter concisus 13826] Length = 190 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 9/193 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L + A++PG G +SA R + + LA+ + + + C CG + Sbjct: 6 EKFNELTESFAKLPGVGKKSAARFAYFVCMQDSFAGLRLAQNIEDAVRFIKRCERCGGLS 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC D+ RD+ VI++VE D+ E++ N LY VL +D I Sbjct: 66 ENEICDICSDESRDSEVILLVESPKDILVFEQNGIYNGLYFVLDEI---------DDDTI 116 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L I+ +E++FA + + Y+ DKL ++ +++A G+P G L+ +D Sbjct: 117 ERLRSAIKQNGSKEVVFAFTPGLNSDALMLYVEDKLGMSEISFSKIAQGVPTGVNLENVD 176 Query: 188 DGTIFEAIRSRTV 200 ++ +A SRT Sbjct: 177 MLSLLKAYESRTK 189 >gi|257459385|ref|ZP_05624496.1| recombination protein RecR [Campylobacter gracilis RM3268] gi|257443238|gb|EEV18370.1| recombination protein RecR [Campylobacter gracilis RM3268] Length = 189 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 9/192 (4%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 E L+ ++PG G +SA R ++ + L LA + + C ICG V Sbjct: 7 FEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRICGAVCEG 66 Query: 70 DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQS 129 + C C D +R++ I +VE+ D++ LE +K N Y VL + ++ I + Sbjct: 67 EICEYCADDERESDKICIVENPKDIFILESNKIYNGRYFVLDAA---------DEDKIAA 117 Query: 130 LIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDG 189 L E + RELIFA++ I Y+ DKL + +K T+LA G+P G LD +D Sbjct: 118 LREMVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVSLDNVDML 177 Query: 190 TIFEAIRSRTVL 201 ++ +AI RT + Sbjct: 178 SLIKAINGRTDI 189 >gi|300869960|ref|YP_003784831.1| recombination protein RecR [Brachyspira pilosicoli 95/1000] gi|300687659|gb|ADK30330.1| recombination protein, RecR [Brachyspira pilosicoli 95/1000] Length = 202 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 116/196 (59%), Gaps = 3/196 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 ++ L +++AR+PG G RSA R L+L ++ L L+ ++ +++ + LC C ++ Sbjct: 6 SLDKLTQMIARLPGIGGRSAMRIALYLFDSDDEYLSELSNSILSLHKNIKLCRECYSLSE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC +RD + + +VE D+ A+E+++ N +YHVLGG + PL IG DI I+ Sbjct: 66 NDICNICASDKRDRTKLCIVESYTDMIAIEKTEEYNGIYHVLGGLIEPLKGIGISDIRIK 125 Query: 129 SLIERIEVK-KIRELIFAISATIEGQTTAHYIMDKLK--GIDVKITRLAYGIPMGSELDY 185 LI+R++ I E+I A A++E TTA YI L+ D KI+R+ YGI + S+++ Sbjct: 126 ELIDRVKDNSSIEEIIIAFGASLEADTTASYINKTLRNNNFDKKISRITYGISLASDIEN 185 Query: 186 LDDGTIFEAIRSRTVL 201 D ++ +I R V+ Sbjct: 186 ADSRSLARSIADRVVM 201 >gi|149193701|ref|ZP_01870799.1| recombination protein RecR [Caminibacter mediatlanticus TB-2] gi|149135654|gb|EDM24132.1| recombination protein RecR [Caminibacter mediatlanticus TB-2] Length = 189 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 K I+NLI+IL +P G +SA R L L K + LA A+ + +KV C CGN Sbjct: 5 KSIQNLIEILEELPSIGKKSATRLALSLAK-DKFKALKLANAIEEVVSKVSECKECGNFS 63 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC + R + +VE D+ +E S N Y VL +D + Sbjct: 64 EHEICEICDNPNR-DKTLAIVETPKDIMIIEESGVYNGYYFVLNHL---------DDENL 113 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 Q + E I+ K I+E+IFA +IE + Y+ DKLK ++V+ +++A G+P G + +D Sbjct: 114 QKIREIIKNKNIKEIIFAFPPSIESEARCLYLEDKLKDLEVEFSQIAQGVPTGVHFENVD 173 Query: 188 DGTIFEAIRSRTVL 201 ++ +AI+ R + Sbjct: 174 INSLAKAIKLRFKI 187 >gi|15606640|ref|NP_214020.1| recombination protein RecR [Aquifex aeolicus VF5] gi|6093946|sp|O67455|RECR_AQUAE RecName: Full=Recombination protein recR gi|2983863|gb|AAC07416.1| recombination protein RecR [Aquifex aeolicus VF5] Length = 211 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 113/199 (56%), Gaps = 2/199 (1%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 + + K ++ ++ + IP +G R A R +L+K +++ + E + + C Sbjct: 13 EDVFPKSLKEALEGIKEIPTYGERGASRFMYNLLKLEKEKRKEIIEKVLEAVEVLRPCRE 72 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + + C IC D++R I VVE+ D +A+E+ + +YHVL G ++PL+ I Sbjct: 73 CFLITDREVCPICSDEKRSKKFICVVEESQDAYAIEKLERYKGVYHVLQGHIAPLEGISA 132 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMG 180 ED+ I +L+ERI+ + +E+I A + +EG+ TA+YI + K VKITR AYG G Sbjct: 133 EDLTIDALMERIKKYQPKEVILATNPNVEGEATANYIAGLIRRKFPAVKITRTAYGFQFG 192 Query: 181 SELDYLDDGTIFEAIRSRT 199 S ++++D+ ++ +++ +R Sbjct: 193 SLIEFVDEYSLEKSMENRK 211 >gi|325295256|ref|YP_004281770.1| Recombination protein recR [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065704|gb|ADY73711.1| Recombination protein recR [Desulfurobacterium thermolithotrophum DSM 11699] Length = 201 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 I +E LI+ L+ PG R+A RA L L + E + A+ + ++ C CG Sbjct: 2 IYPDNLELLIRFLSETPGISERAAERAVLSLSRLDEDEKRMITNALREL-ERIKPCVECG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D C +C D +R+ +VI VVE D ++E+ LYHVLGG +SPL+ I PED Sbjct: 61 LPTEEDLCVVCRDPEREQTVICVVEQPRDAISIEKLGEYKGLYHVLGGVISPLEDISPED 120 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I+SL +RI+ K I+ +I A++ T+EG+ T+ +++D+L+ ++V+I R++YGIP G +D Sbjct: 121 LRIESLFKRIKEKNIKTVIIALNPTVEGEATSKFLIDRLEKMNVEIYRISYGIPYGGTID 180 Query: 185 YLDDGTIFEAIRSRTVL 201 D+ T+ +A + ++ Sbjct: 181 MADELTLKKAFEDKKLI 197 >gi|294660557|ref|NP_853381.2| Recombination protein RecR [Mycoplasma gallisepticum str. R(low)] gi|284812220|gb|AAP56949.2| Recombination protein recR [Mycoplasma gallisepticum str. R(low)] gi|284930877|gb|ADC30816.1| Recombination protein recR [Mycoplasma gallisepticum str. R(high)] Length = 206 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 106/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + E NL++ ++ +P + A++ T +L+ K ++ + L + + + +C Sbjct: 1 MTSDLDLNEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDLIDVLKRAKLSIKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C C+IC D+ R+ + + +V DL +E S+A + Y +L +S ++ Sbjct: 61 EMCQGWSNRSICSICSDESRNNNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKR 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 E+I L++ I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P Sbjct: 121 IIEEINFDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYN 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S +DY D ++ A ++ ++ Sbjct: 181 SSIDYADSFSLKGAFENKQLI 201 >gi|284931633|gb|ADC31571.1| Recombination protein recR [Mycoplasma gallisepticum str. F] Length = 206 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 106/201 (52%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M I E NL++ ++ +P + A++ T +L+ K ++ + + + + + +C Sbjct: 1 MASDIDLNEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDMIDVLKRAKLSIKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +C C+IC D+ R+ + + +V DL +E S+A + Y +L +S ++ Sbjct: 61 EMCQGWSNRSICSICSDESRNKNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKR 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 E+I L++ I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P Sbjct: 121 IIEEINFDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYN 180 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 S +DY D ++ A ++ ++ Sbjct: 181 SSIDYADSFSLKGAFENKQLI 201 >gi|330444498|ref|YP_004377484.1| recombination protein RecR [Chlamydophila pecorum E58] gi|328807608|gb|AEB41781.1| recombination protein RecR [Chlamydophila pecorum E58] Length = 220 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 5/198 (2%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + L+ L R+PG G ++A + L+ E+ L L CS C Sbjct: 22 YPSYLSQLVSFLKRLPGIGFKTAEKLAFELLSWDEEQLKALGNVFYETAAARSFCSQCFC 81 Query: 66 VDTT--DPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 + + C C RD S + +V D++ LERSK Y+ LG LSP+ Sbjct: 82 LKESSLTQCEFCSS-TRDTSTLCIVASQKDVFFLERSKVFKGRYYTLGSQLSPMTGQHIP 140 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIPMGS 181 + +L I+V +E+I A+ AT+EG TA ++ +L+G I+RLA G+P+G Sbjct: 141 PQRVAALKHYIQVLSPKEIILALDATLEGDATALFLKQELEGASFSGSISRLALGLPVGL 200 Query: 182 ELDYLDDGTIFEAIRSRT 199 DY+D T+ A R+ Sbjct: 201 SFDYVDVSTLSRAFSGRS 218 >gi|307721329|ref|YP_003892469.1| DNA replication and repair protein RecR [Sulfurimonas autotrophica DSM 16294] gi|306979422|gb|ADN09457.1| DNA replication and repair protein RecR [Sulfurimonas autotrophica DSM 16294] Length = 189 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 12/199 (6%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + ++ L++ L +P G +SA R +++ +A A+ + + C Sbjct: 1 MNNSL--EKFNRLVEALGELPSIGKKSATRLAYYMIMNDTFAGMKIAHAIEDALGSLKKC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D+ RDAS++ +VE+ D+ LE + + Y VL Sbjct: 59 KECGGMSEDELCYICCDEMRDASLLCIVENAKDILLLEENGLFDGKYFVLESL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 + S +E I + E++FA++ +I YI DKL D+ +++A G+P G Sbjct: 112 ---EELSMSHLETIVQNGVSEVLFALTPSIANDAVILYIEDKLGIYDLNFSKIAQGVPTG 168 Query: 181 SELDYLDDGTIFEAIRSRT 199 L+ +D ++ A+ R Sbjct: 169 VSLENIDLLSLTRALEDRV 187 >gi|171920181|ref|ZP_02931568.1| recombination protein RecR [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701809|ref|ZP_02971483.1| recombination protein RecR [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|171902557|gb|EDT48846.1| recombination protein RecR [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701095|gb|EDU19377.1| recombination protein RecR [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 201 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 4/202 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + E E L+ L +PG G ++A + L+++ ++ + L + + + C Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N D C IC+++ RD + +++V DL +E + N LYH+ G +S + Sbjct: 58 KYCANFTNKDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNV 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 E I+++ ER+ +E+I A S T +G+ TA YI+ L+ D++I R+ +GIP+ Sbjct: 118 VIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIKMLEDIKDLQIYRIGFGIPL 177 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 S +DY DD T+ +++ ++ + Sbjct: 178 NSSIDYADDETLKQSLINKRKI 199 >gi|13357645|ref|NP_077919.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762232|ref|YP_001752169.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508466|ref|ZP_02958003.1| recombination protein RecR [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|20139832|sp|Q9PR56|RECR_UREPA RecName: Full=Recombination protein recR gi|189029381|sp|B1AI75|RECR_UREP2 RecName: Full=Recombination protein recR gi|11277992|pir||H82935 recombinational DNA repair protein UU089 [imported] - Ureaplasma urealyticum gi|6899041|gb|AAF30494.1|AE002108_7 recombinational DNA repair protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827809|gb|ACA33071.1| recombination protein RecR [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675882|gb|EDT87787.1| recombination protein RecR [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 201 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 4/202 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K + E E L+ L +PG G ++A + L+++ ++ + L + + + C Sbjct: 1 MSKPV---EFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 C N D C IC+++ RD + +++V DL +E + N LYH+ G +S + Sbjct: 58 KYCANFTNKDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNV 117 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG-IDVKITRLAYGIPM 179 E I+++ ER+ +E+I A S T +G+ TA YI+ L+ D++I R+ +GIP+ Sbjct: 118 VIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPL 177 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 S +DY DD T+ +++ ++ + Sbjct: 178 NSSIDYADDETLKQSLINKRKI 199 >gi|87302304|ref|ZP_01085129.1| RecR protein [Synechococcus sp. WH 5701] gi|87283229|gb|EAQ75185.1| RecR protein [Synechococcus sp. WH 5701] Length = 159 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 97/159 (61%), Gaps = 1/159 (0%) Query: 43 LGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKA 102 + A+A+ +V CS C ++ C IC +++R + VV D DL ALER++ Sbjct: 1 MQAFADALIAARRQVGQCSRCFHLSADRLCDICRNEERRNGQLCVVADSRDLLALERTRE 60 Query: 103 VNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK 162 YHVLGG +SP+D IGPE + IQ L+ R++ + + E+I A+ ++EG TT+ Y+ Sbjct: 61 YKGSYHVLGGLISPMDGIGPELLQIQPLVNRVDQETMTEVILALPPSVEGDTTSLYLARL 120 Query: 163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 L+ + ++R+AYG+P+GSEL+Y D+ T+ A+ R + Sbjct: 121 LRPFCL-VSRIAYGLPVGSELEYADEVTLARALEGRRRM 158 >gi|34557110|ref|NP_906925.1| recombination protein RecR [Wolinella succinogenes DSM 1740] gi|34482825|emb|CAE09825.1| RECOMBINATION PROTEIN [Wolinella succinogenes] Length = 190 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 11/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+K + + L++ L ++P G +SA R L +++ LA A+ K+ C Sbjct: 1 MKKGM--ESFFTLVESLEKLPSVGRKSALRLGYFLAIEEKFSALKLAHAIEEAVVKIKRC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 CG + + C IC D+ R + +V D++ LE SK Y V+ Sbjct: 59 ERCGALSEHELCEICSDETRLNGQLCIVTHPKDIFILEESKHFEGRYFVIDSL------- 111 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 ED L I KI E+IFA S ++ + Y+ DKL+ + V +++A G+P G Sbjct: 112 --EDCDFTLLRSLIVSLKITEVIFAFSPSLSNDSIIFYVEDKLQDLGVSFSKIAQGVPTG 169 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 L+ +D ++ A SR L Sbjct: 170 VSLENIDQLSLTRAFDSRIKL 190 >gi|254458961|ref|ZP_05072384.1| recombination protein RecR [Campylobacterales bacterium GD 1] gi|207084232|gb|EDZ61521.1| recombination protein RecR [Campylobacterales bacterium GD 1] Length = 189 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 10/192 (5%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 + L+ L +P G +SA R H+V K + ++ + + + C++CG + Sbjct: 7 KFNRLVDALQELPTIGKKSATRLAYHMVMKDSYVGMKISHTIEDALGSLKKCTVCGGMSE 66 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC D++RD++V+ ++E+ D+ LE + + Y VL + Sbjct: 67 DELCFICSDERRDSTVLCIIENAKDILLLEENGLFDGRYFVLDSL----------EELSI 116 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 S + +I + E++FA++ +I YI DKL G + +++A G+P G L+ +D Sbjct: 117 SHLVKIVESGVNEVLFALTPSISNDAVILYIEDKLSGHKLSFSKIAQGVPTGVSLENIDI 176 Query: 189 GTIFEAIRSRTV 200 ++ A+ R Sbjct: 177 LSLTRALEDRVK 188 >gi|224417864|ref|ZP_03655870.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491] gi|253827203|ref|ZP_04870088.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491] gi|313141407|ref|ZP_07803600.1| recombination protein [Helicobacter canadensis MIT 98-5491] gi|253510609|gb|EES89268.1| recombination protein RecR [Helicobacter canadensis MIT 98-5491] gi|313130438|gb|EFR48055.1| recombination protein [Helicobacter canadensis MIT 98-5491] Length = 190 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 9/199 (4%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + L++ L ++P G +SA R L + + +A + + ++ +C Sbjct: 1 MKSLPESFVKLVESLEKLPSIGKKSAMRLAYFLAFEDKFSALQIAHNIEHCMQELRICEE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + C IC + R+ + ++ D++ LE S + Y V+ Sbjct: 61 CFGISKEPVCEICSNAMRNNGELCILTSPKDIFLLEESGEFHGKYFVITSL--------- 111 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + ++ L +I K+ E+IFA+S +++ + Y+ DKL +D++ T++A G+P G Sbjct: 112 EALNLKLLENKIIKDKVTEVIFALSPSLKSDSLMLYLEDKLSHLDLQFTKIAQGVPTGVS 171 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D +I A++SR + Sbjct: 172 LENIDQLSIIRALQSRVKI 190 >gi|323160542|gb|EFZ46488.1| recombination protein RecR [Escherichia coli E128010] Length = 160 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 96/158 (60%), Gaps = 1/158 (0%) Query: 45 PLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAV 103 LA+A+ +++ C+ C + C IC + +R I VVE AD++A+E++ Sbjct: 1 RLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQF 60 Query: 104 NALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL 163 + Y VL G LSPLD IGP+DIG+ L +R+ +KI E+I A + T+EG+ TA+YI + Sbjct: 61 SGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC 120 Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 DV+ +R+A+G+P+G EL+ +D T+ ++ R + Sbjct: 121 AQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 158 >gi|154148981|ref|YP_001406701.1| recombination protein RecR [Campylobacter hominis ATCC BAA-381] gi|153804990|gb|ABS51997.1| recombination protein RecR [Campylobacter hominis ATCC BAA-381] Length = 189 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 12/201 (5%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ + + L+ ++PG G +SA R H+ L LA ++ N + C Sbjct: 1 MKN---NTKFDELVATFEKLPGVGKKSALRYAYHISINDPFLGLNLANSIENAVRNLRRC 57 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 +CG + + C +C D RD I +VE D+ E + + LY VL S Sbjct: 58 EVCGAICEDEICEVCCDTSRDREKICIVESPKDILIFEENAIFDGLYFVLDSS------- 110 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 D I L IE+ ++ELIFA++ + Y+ DK+ ++K +++A GIP G Sbjct: 111 --GDEIITKLQRMIELNGVKELIFAMTPGVNSDMLMLYVEDKISIPNLKFSKIAQGIPTG 168 Query: 181 SELDYLDDGTIFEAIRSRTVL 201 +D +D ++ +A++ R + Sbjct: 169 VSVDSIDFISLSKALKDRVGI 189 >gi|222823521|ref|YP_002575095.1| recombination protein RecR [Campylobacter lari RM2100] gi|222538743|gb|ACM63844.1| recombination protein RecR [Campylobacter lari RM2100] Length = 190 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 9/194 (4%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L+ + +P G +SA R H+ K L LA + + C+ CG + Sbjct: 5 EKFNELVSAFSALPTIGKKSALRLAYHVCIKDPLLGSKLAYHIEESIRMIKKCTQCGALS 64 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C +C + +R+ ++I +V+D D+ LE S + + LY VL + I Sbjct: 65 ENELCEVCSNIERNHNIICIVQDSKDVLVLEDSGSYDGLYFVLDDIS---------EENI 115 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 L IE K E+ FA + + ++ +KLK +++ +++A GIP G L+ +D Sbjct: 116 IKLRSMIEHNKTTEIFFAFTQGLNSDAIVFFVEEKLKDLNLSFSQIAQGIPSGVSLENVD 175 Query: 188 DGTIFEAIRSRTVL 201 ++ +AI RT L Sbjct: 176 FISLHKAINHRTRL 189 >gi|78777482|ref|YP_393797.1| recombination protein RecR [Sulfurimonas denitrificans DSM 1251] gi|78498022|gb|ABB44562.1| DNA replication and repair protein RecR [Sulfurimonas denitrificans DSM 1251] Length = 189 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 12/200 (6%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M + + ++ L++ +P G +SA R H+V K + +A A+ + C Sbjct: 1 MSESL--EKFNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEEALGSIKQC 58 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 + CG + + C IC D+ RD +++ +VE+ D+ LE ++ + Y VL + Sbjct: 59 AACGGMSEDELCFICCDESRDETLLCIVENAKDILLLEENRLFDGRYFVLDSLENFNLSG 118 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMG 180 +E + + E++FA++ +I YI DKL + +++A G+P G Sbjct: 119 ----------LESLVKNGVEEIVFALTPSIANDAVILYIEDKLSDFTINFSKIAQGVPTG 168 Query: 181 SELDYLDDGTIFEAIRSRTV 200 L+ +D ++ A+ R Sbjct: 169 VSLENIDLLSLSRALIDRVK 188 >gi|268679206|ref|YP_003303637.1| recombination protein RecR [Sulfurospirillum deleyianum DSM 6946] gi|268617237|gb|ACZ11602.1| recombination protein RecR [Sulfurospirillum deleyianum DSM 6946] Length = 189 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 10/193 (5%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67 ++ L++ ++P G +SA R HLV L L+ + + + C CG + Sbjct: 6 EKFNKLVEAFEKLPTVGRKSALRFAYHLVLNDTSLAMKLSHTIESAIKSIRKCERCGALS 65 Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127 + C IC+D++RD + + VVE D++ LE K + Y VL ++ + Sbjct: 66 EHELCDICVDERRDHAKLCVVESAKDIFILEEHKLFDGNYFVLASL---------DEEIL 116 Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187 + L RI + ++E+IFA++ ++ ++ D+LK + T++A G+P G L+ +D Sbjct: 117 ERLENRI-KEGVQEVIFALTPSLSTDALILFVEDRLKAYALHFTKIAQGVPTGVHLENVD 175 Query: 188 DGTIFEAIRSRTV 200 ++ +A+ +RT Sbjct: 176 MLSLSKALEARTK 188 >gi|327398752|ref|YP_004339621.1| recombination protein RecR [Hippea maritima DSM 10411] gi|327181381|gb|AEA33562.1| recombination protein RecR [Hippea maritima DSM 10411] Length = 201 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 4/201 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M+ K ++ L L IPG G ++A + L + K++ +++ + I KV C Sbjct: 1 MKNAHL-KLLDELSLYLKNIPGIGEKNASKYAFWLAEHKDK-ANSISKLLKEISEKVKSC 58 Query: 61 SICGNVD--TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLD 118 +C N+ C IC D+ RD + VVE + +L +E + N LY +LGG +SP+ Sbjct: 59 RLCYNLTANENGICDICSDKSRDHETVCVVETIENLLEIETANVYNGLYFILGGVISPIY 118 Query: 119 RIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 I I L+ RI ++ +ELI IS T EG+ T YI +KLK ++KIT++A G+P Sbjct: 119 GIDSIIKRIDYLVSRILKEQKKELILVISPTTEGELTMQYIKEKLKPSNIKITKVAIGVP 178 Query: 179 MGSELDYLDDGTIFEAIRSRT 199 G++++Y++ T+ EA + RT Sbjct: 179 AGADINYINKKTLIEAFKMRT 199 >gi|88800843|ref|ZP_01116398.1| recombination protein RecR [Reinekea sp. MED297] gi|88776416|gb|EAR07636.1| recombination protein RecR [Reinekea sp. MED297] Length = 203 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 E LI+ L +PG G RSA+R L L++++ + L+ A+++ V C C Sbjct: 3 FTPATEKLIQALQALPGVGVRSAQRMALQLLEREPETGQRLSSALSDALTLVHKCPQCRT 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + D C +C + RDASVI VV D +E S A Y VL G LSP+D IGPE + Sbjct: 63 LTEDDLCGVCANPDRDASVICVVASDVDRAGIEMSAAFQGRYFVLHGVLSPIDGIGPETL 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 G+ L+E ++ E++ A+ +E + T H+I ++ K + +TR+ + LD Sbjct: 123 GLVELVELARSGEVSEIMLALDDRLESEATVHFIKEQFKESGLTVTRVPFHQMKSGALDQ 182 Query: 186 LDDGTIFEAIRSRTVL 201 D I +A+ + L Sbjct: 183 ADSRVIEQALTQKQTL 198 >gi|331703063|ref|YP_004399750.1| Recombination protein [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801618|emb|CBW53771.1| Recombination protein [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 199 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 3/197 (1%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 K+ + +I+ + G +++ R + L+ K++ L + + + C IC Sbjct: 3 KMLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LDQFIDQLNKAKQLISTCKIC 61 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 G + + C +C R+ + I +V + D +E + +YH+L G ++ I + Sbjct: 62 GYLSENNKCLVCSLDNRNQNTICIVSTILDAKNIENTNKYKGVYHILNGEINLNKNITFD 121 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSEL 183 + I S+ +RI E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ L Sbjct: 122 KLNISSIFKRI--NDNTEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASL 179 Query: 184 DYLDDGTIFEAIRSRTV 200 DY+D+ T+ A +R Sbjct: 180 DYMDEFTLQSAFLNRKK 196 >gi|319956222|ref|YP_004167485.1| DNA replication and repair protein recr [Nitratifractor salsuginis DSM 16511] gi|319418626|gb|ADV45736.1| DNA replication and repair protein RecR [Nitratifractor salsuginis DSM 16511] Length = 189 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 11/198 (5%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 K+ + E L++ +P G ++A R HLV ++ LA+A+ + + + C Sbjct: 1 MKRYRVESFERLVEAFNALPTIGRKTATRLAYHLVTEQGFSGLKLAQAIEDAVSSLRTCR 60 Query: 62 ICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 C + + C IC D RD S + +V+ D++ +E S LY++L Sbjct: 61 RCHAICEDELCGICSDPGRDRSKLCIVQSAKDIFTIEESGQYEGLYYILSS--------- 111 Query: 122 PEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGS 181 + +S + I V+ + E+IFA I T YI D+L + T++A G+P G Sbjct: 112 -IEELDESHLHEI-VEGVEEVIFAFPPGIATDTMILYIEDRLSDRGLVFTKIAQGVPTGV 169 Query: 182 ELDYLDDGTIFEAIRSRT 199 ELD +D ++ A+ R Sbjct: 170 ELDNIDLLSLSRALEDRV 187 >gi|50365492|ref|YP_053917.1| recombination protein [Mesoplasma florum L1] gi|50364048|gb|AAT76033.1| recombination protein [Mesoplasma florum L1] Length = 196 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 3/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + E +I + + G +++ R +L+ + L ++ + I + +C IC Sbjct: 1 MNNELFEEIINNINKNNGLTKKTSERLVNNLII-DKFALDNFSKQLNFIKDNFSICPICN 59 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC D+ R+ +VI VV D+ +E+ LYHVLG ++ + P + Sbjct: 60 YYQIKNECLICSDETRNQNVICVVASQLDVNNIEKINKYKGLYHVLGSEINLNKKRSPSE 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I +SL+ RI +K ELI A++AT EG+ T +YI K +++ ITR+A GIPMG LD Sbjct: 120 INFESLLSRI--EKNTELILALNATFEGELTTNYIYQLTKNMNINITRIAKGIPMGGSLD 177 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ T+ A ++R Sbjct: 178 YMDETTLESAFKNRKK 193 >gi|16124524|ref|NP_419088.1| recombination protein RecR [Caulobacter crescentus CB15] gi|25398644|pir||D87282 recombination protein RecR [imported] - Caulobacter crescentus gi|13421404|gb|AAK22256.1| recombination protein RecR [Caulobacter crescentus CB15] Length = 152 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 75/151 (49%), Positives = 102/151 (67%) Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHV 109 MA KV C CG++D TDPCA+C D RD ++ VVE+V +WA+ER + YHV Sbjct: 1 MAEAQAKVRTCGTCGSLDVTDPCAVCADGSRDGRLLCVVEEVGSVWAMERGGSFKGRYHV 60 Query: 110 LGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVK 169 LGG LS LD IGPE + I L+ R+ + E+I A+ AT++GQTTAHYI D+L +V Sbjct: 61 LGGLLSALDGIGPEALRIGELVGRVADGSVAEVILALPATVDGQTTAHYIADRLAKTNVP 120 Query: 170 ITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 +T LA G+P+G +LD+LDDGTI +A+R+R Sbjct: 121 VTMLARGVPVGGDLDWLDDGTIAQALRARRP 151 >gi|254431560|ref|ZP_05045263.1| recombination protein RecR [Cyanobium sp. PCC 7001] gi|197626013|gb|EDY38572.1| recombination protein RecR [Cyanobium sp. PCC 7001] Length = 145 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 57 VCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116 + C C ++ C IC +++R + VV D DL A+ER++ YHVLGG +SP Sbjct: 1 MGQCQRCFHLSAEPLCEICRNEERRNGQLCVVADSRDLLAMERTREFRGGYHVLGGLISP 60 Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 +D IGPE + IQ L++R+ + E+I A++ ++EG TT+ Y+ LK ++R+AYG Sbjct: 61 MDGIGPELLQIQPLVQRVAADGVEEVILALTPSVEGDTTSLYLARLLKPF-TTVSRIAYG 119 Query: 177 IPMGSELDYLDDGTIFEAIRSRTV 200 +P+GSEL+Y D+ T+ A R Sbjct: 120 LPVGSELEYADEVTLARAFEGRRQ 143 >gi|308190300|ref|YP_003923231.1| recombinational DNA repair protein [Mycoplasma fermentans JER] gi|319777694|ref|YP_004137345.1| recombination protein recr [Mycoplasma fermentans M64] gi|238810243|dbj|BAH70033.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307625042|gb|ADN69347.1| recombinational DNA repair protein [Mycoplasma fermentans JER] gi|318038769|gb|ADV34968.1| Recombination protein RecR [Mycoplasma fermentans M64] Length = 196 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 105/197 (53%), Gaps = 2/197 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + IE L ++L IPG + A + + +K+ ++ + L +++ ++ + CSIC Sbjct: 1 MKIETIEKLNQVLTTIPGISKKQADKMSNFFLKQDQEYIDNLVKSINDLKTNISYCSICN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C +C D+ R + +++VE+ A L ++ N Y+VL + + ++ Sbjct: 61 FLKEGGKCLVCDDKSR-YNFLMIVENAATLRKIDDMNFYNGYYYVLPYLFNLKNNKEIKN 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL-KGIDVKITRLAYGIPMGSEL 183 + LI I+ KK E+I +S ++EG+ T +++ + +K+TR A G+PMGS L Sbjct: 120 YDYKELINYIQHKKFDEVIIVLSPSLEGEMTTGHLLKLINSQFKIKVTRAAIGMPMGSNL 179 Query: 184 DYLDDGTIFEAIRSRTV 200 +YLD TI ++I +R Sbjct: 180 EYLDTFTIKQSIENRNK 196 >gi|148377948|ref|YP_001256824.1| recombination protein RecR [Mycoplasma agalactiae PG2] gi|148291994|emb|CAL59386.1| Recombination protein RecR [Mycoplasma agalactiae PG2] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K I+ L K L IP + A + +++K + + E + +K+ C C Sbjct: 1 MNIKTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILETKDKIGFCEKCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + CA C D+ + +IVVE VA + + + N + VL LS + D Sbjct: 61 FIVENGKCANC-DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVD 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L+ I+ KKI E+I +S TIEGQ T +M + IDVK+TR A G+P+ + ++ Sbjct: 120 FNYEHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKVTRAAVGLPLNANIE 179 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ TI +AI +RT Sbjct: 180 YIDEFTIKQAIENRTK 195 >gi|256384237|gb|ACU78807.1| DNA repair protein RecM [Mycoplasma mycoides subsp. capri str. GM12] gi|256385070|gb|ACU79639.1| DNA repair protein RecM [Mycoplasma mycoides subsp. capri str. GM12] gi|296455620|gb|ADH21855.1| DNA repair protein RecM [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 196 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 3/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +I+ + G +++ R + L+ K++ L + + + C ICG Sbjct: 1 MLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LDQFIDQLNKAKQLISTCKICG 59 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + D C +C + R+ ++I +V + D +E + +YH+L G ++ I + Sbjct: 60 YLSENDKCLVCSLENRNQNIICIVSTILDAKNIENTNKYKGVYHILNGEINLNKNITLDK 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I S+ +RI E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LD Sbjct: 120 LNISSIFKRI--NDNTEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLD 177 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ T+ A +R Sbjct: 178 YMDEFTLQSAFLNRKK 193 >gi|304372904|ref|YP_003856113.1| Recombination protein [Mycoplasma hyorhinis HUB-1] gi|304309095|gb|ADM21575.1| Recombination protein [Mycoplasma hyorhinis HUB-1] gi|330723508|gb|AEC45878.1| recombination protein RecR [Mycoplasma hyorhinis MCLD] Length = 190 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 5/195 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + GKE E LI PG G + A + L+ K + L++ + + + C C Sbjct: 1 MFGKEYEELISTFKTFPGVGKKQAEKFFYFLLNKDIEFFQDLSQKIIKLKQNLQPCERCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V C+IC+D R +S I++VE+ +D+ E + Y V ++ Sbjct: 61 FVSLNVVCSICLDPDR-SSQIMLVENSSDVIKFENLRFYEGKYFVFDYKKGVDNKY--LT 117 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I L I ++ ELI A S IEG A+++M+ +VKI++LA GIP+G++++ Sbjct: 118 AKINKLRNLI--RENTELIVAFSFNIEGLVLANFVMNHKDLKNVKISKLASGIPLGAQIE 175 Query: 185 YLDDGTIFEAIRSRT 199 Y+D+ T+ EAI++R Sbjct: 176 YVDELTLKEAIKNRK 190 >gi|330960249|gb|EGH60509.1| recombination protein RecR [Pseudomonas syringae pv. maculicola str. ES4326] Length = 170 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 3/170 (1%) Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA 92 + L+++ LA A+ + V C C + + C C D +RD +++ VVE Sbjct: 1 MQLLERDRSGGSRLALALGQAMDGVGHCRSCRTLTEEEFCPQCADPRRDDTLLCVVEGPT 60 Query: 93 DLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK-IRELIFAISATIE 151 D++A+E++ Y VL G LSPLD +GP+ IGI L+ERI + E+I A +A +E Sbjct: 61 DVYAVEQTG-YRGRYFVLKGHLSPLDGLGPDAIGIPQLMERIAQQGTFTEVILATNA-VE 118 Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 G+ TAHYI L + +R+A+G+P+G ELD +D GT+ + R + Sbjct: 119 GEATAHYIAQLLNDKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 168 >gi|330976059|gb|EGH76125.1| recombination protein RecR [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 161 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 2/158 (1%) Query: 45 PLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVN 104 LA+A+ + V C C + + C C D +RD +++ VVE D++A+E++ Sbjct: 3 RLAQALGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YR 61 Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKL 163 Y VL G LSPLD +GPE IGI L+ER+ + E+I A + T+EG+ TAHYI L Sbjct: 62 GRYFVLKGHLSPLDGLGPEAIGIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLL 121 Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 + +R+A+G+P+G ELD +D GT+ + R + Sbjct: 122 HDKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 159 >gi|15645541|ref|NP_207717.1| recombination protein RecR [Helicobacter pylori 26695] gi|207091729|ref|ZP_03239516.1| recombination protein RecR [Helicobacter pylori HPKX_438_AG0C1] gi|210135115|ref|YP_002301554.1| recombination protein RecR [Helicobacter pylori P12] gi|3024518|sp|P56214|RECR_HELPY RecName: Full=Recombination protein recR gi|238058665|sp|B6JME6|RECR_HELP2 RecName: Full=Recombination protein recR gi|2314062|gb|AAD07970.1| recombinational DNA repair protein (recR) [Helicobacter pylori 26695] gi|210133083|gb|ACJ08074.1| recombinational DNA repair protein [Helicobacter pylori P12] gi|317009582|gb|ADU80162.1| recombination protein RecR [Helicobacter pylori India7] gi|317012734|gb|ADU83342.1| recombination protein RecR [Helicobacter pylori Lithuania75] Length = 193 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + CS C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|291320672|ref|YP_003515937.1| Recombination protein RecR [Mycoplasma agalactiae] gi|290753008|emb|CBH40984.1| Recombination protein RecR [Mycoplasma agalactiae] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K I+ L K L IP + A + +++K + + E + + +K+ C C Sbjct: 1 MNIKTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILDTKDKIGFCKKCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C C D+ + +IVVE VA + + + N + VL LS + D Sbjct: 61 FIVENGKCVNC-DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVD 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L+ I+ KKI E+I +S TIEGQ T +M + IDVK TR A G+P+ S ++ Sbjct: 120 FNYEHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKATRAAVGLPLNSNIE 179 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ TI +AI +RT Sbjct: 180 YIDEFTIKQAIENRTK 195 >gi|332704009|ref|ZP_08424097.1| Recombination protein recR [Desulfovibrio africanus str. Walvis Bay] gi|332554158|gb|EGJ51202.1| Recombination protein recR [Desulfovibrio africanus str. Walvis Bay] Length = 202 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 3/203 (1%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K+ + + ++ + +AR+PGFGP+SA RA L L+ + L A+ + +C C Sbjct: 1 MTNKL-PRPLRDVAEQMARLPGFGPKSALRAALALLGMPREQAEGLGRAILTLREHLCFC 59 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S C ++ DPC +C D RD+ +++V D L ALE Y VLGG L+PLD++ Sbjct: 60 SRCNSISEFDPCPVCADPGRDSEQLVLVSDWDSLLALEEGGFFRGQYFVLGGLLAPLDKV 119 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG--IDVKITRLAYGIP 178 PE + L +R+ ++RELI A+ T++ + TA Y+ + ++ +V++TRLA GIP Sbjct: 120 NPEQLAFDRLRDRLAESEVRELILALGTTMDAEATASYVKNMVERDFPEVRVTRLAQGIP 179 Query: 179 MGSELDYLDDGTIFEAIRSRTVL 201 +GSE+ ++D T+ +++ R L Sbjct: 180 LGSEVRFVDKETLRQSLLHRQKL 202 >gi|291277441|ref|YP_003517213.1| recombination protein [Helicobacter mustelae 12198] gi|290964635|emb|CBG40489.1| recombination protein [Helicobacter mustelae 12198] Length = 193 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 10/202 (4%) Query: 1 MQKKITG-KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M+ + L++ L +IP G +SA + + + + L +A + N + Sbjct: 1 MKSYKNNLRHFNALLESLEQIPAIGKKSALKIAYAISVENKFLGLKIAHCIENAISHARN 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 CS+C + + C IC D+ RD+S + +V D++ +E + LY V+ Sbjct: 61 CSLCNALSENELCDICSDENRDSSQLCMVLHSKDIFTIEETGDYKGLYFVIQ-------- 112 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 P+ + L ++I + RE+IFA S T+ YI DKL+ +D+ +++A G+P Sbjct: 113 -DPKALDFSRLQKQILDHQTREIIFAFSPTLANDAIMLYIEDKLQHLDLSFSKIAQGVPT 171 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G LD +D ++ +AI RT + Sbjct: 172 GIGLDNVDQLSLSKAILWRTKI 193 >gi|208434828|ref|YP_002266494.1| recombinational DNA repair protein [Helicobacter pylori G27] gi|238058666|sp|B5Z7S9|RECR_HELPG RecName: Full=Recombination protein recR gi|208432757|gb|ACI27628.1| recombinational DNA repair protein [Helicobacter pylori G27] Length = 193 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + CS C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQRFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|317011133|gb|ADU84880.1| recombination protein RecR [Helicobacter pylori SouthAfrica7] Length = 193 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L L A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPFLALKLTHALENALENLKTCASCNALSESEI 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K YHVL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSI---------ENVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ +KI+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLVKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCRLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|83319376|ref|YP_424008.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283262|gb|ABC01194.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 196 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 3/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++ + G +++ R ++L+ K++ L + + + C ICG Sbjct: 1 MPESIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDK-LDEFINQLNKVNQLISTCKICG 59 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C +C R+ + I +V + D +E + +YH+L G ++ I + Sbjct: 60 YLSENNKCLVCSLDNRNQNTICIVSTILDAKNIENANKYKGVYHILNGEINLNKNITFDK 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I S+ +RI E+I A+++T EG+ TA+Y+ L ++KITRLA GIPMG+ LD Sbjct: 120 LNISSIFKRI--NDDTEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLD 177 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ T+ A +R Sbjct: 178 YMDEFTLQSAFINRKK 193 >gi|109947625|ref|YP_664853.1| recombination protein RecR [Helicobacter acinonychis str. Sheeba] gi|123066196|sp|Q17WX2|RECR_HELAH RecName: Full=Recombination protein recR gi|109714846|emb|CAJ99854.1| recombination protein [Helicobacter acinonychis str. Sheeba] Length = 193 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L L A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCNALSESEI 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K YHVL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSI---------ENVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ +KI+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|261839711|gb|ACX99476.1| recombination protein RecR [Helicobacter pylori 52] gi|317177712|dbj|BAJ55501.1| recombination protein RecR [Helicobacter pylori F16] gi|317178725|dbj|BAJ56513.1| recombination protein RecR [Helicobacter pylori F30] Length = 193 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALRITHALENALENLKTCASCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|308062241|gb|ADO04129.1| recombination protein RecR [Helicobacter pylori Cuz20] Length = 193 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|257484837|ref|ZP_05638878.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 160 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 2/158 (1%) Query: 45 PLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVN 104 LA A+ + V C C + + C C D +RD +++ VVE D++A+E++ Sbjct: 2 RLALALGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YR 60 Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKL 163 Y VL G LSPLD +GPE IGI L+ERI + E+I A + T+EG+ TAHYI L Sbjct: 61 GRYFVLKGHLSPLDGLGPEAIGIPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLL 120 Query: 164 KGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 + +R+A+G+P+G ELD +D GT+ + R + Sbjct: 121 HEKGLVASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 158 >gi|315586870|gb|ADU41251.1| recombination protein R [Helicobacter pylori 35A] Length = 193 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNAISESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIKENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|261838299|gb|ACX98065.1| recombinational DNA repair protein [Helicobacter pylori 51] Length = 193 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALRITHALENALENLKTCASCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|260654559|ref|ZP_05860049.1| recombination protein RecR [Jonquetella anthropi E3_33 E1] gi|260630575|gb|EEX48769.1| recombination protein RecR [Jonquetella anthropi E3_33 E1] Length = 175 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 3/172 (1%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 ++++ + +A+A+ + V CS CGN+ T PC IC D R+ ++ VVE Sbjct: 1 MAFFVLQQPQSYAKDMADALNALKRDVATCSRCGNLTVTQPCPICSDPMRNRHLLCVVES 60 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIG--PEDIGIQSLIERIEVKKIRELIFAISA 148 + DL ++E S N LY L S+SP+D P D+ I+ L I + I E+I A + Sbjct: 61 LEDLTSIELSGLFNGLYFNLATSVSPMDDRENIPPDV-IERLRALIAQEPIEEIIIATNP 119 Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 +EG T + ++D L + V +RLAYG+P+G +++ D T+ A+ SR Sbjct: 120 RVEGDMTFYALLDALADLPVTKSRLAYGLPVGGSIEFADRVTLHAALESRRP 171 >gi|217033994|ref|ZP_03439417.1| hypothetical protein HP9810_883g64 [Helicobacter pylori 98-10] gi|308183077|ref|YP_003927204.1| recombination protein RecR [Helicobacter pylori PeCan4] gi|216943627|gb|EEC23075.1| hypothetical protein HP9810_883g64 [Helicobacter pylori 98-10] gi|297380122|gb|ADI35009.1| recombination protein RecR [Helicobacter pylori v225d] gi|308063754|gb|ADO05641.1| recombination protein RecR [Helicobacter pylori Sat464] gi|308065262|gb|ADO07154.1| recombination protein RecR [Helicobacter pylori PeCan4] gi|317182224|dbj|BAJ60008.1| recombination protein RecR [Helicobacter pylori F57] gi|332673764|gb|AEE70581.1| recombination protein R [Helicobacter pylori 83] Length = 193 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|318040218|ref|ZP_07972174.1| recombination protein RecR [Synechococcus sp. CB0101] Length = 145 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 1/145 (0%) Query: 57 VCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116 + C C ++ C IC +++R+ V+ VV D DL ALER++ YHVLGG +SP Sbjct: 1 MGQCQRCYHLSADPLCEICRNEERNTGVLCVVADSRDLLALERTREFRGGYHVLGGLISP 60 Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 +D +GPE + IQ L+ER++ + E+I A++ ++EG TT+ Y+ LK +++R+AYG Sbjct: 61 MDGVGPELLQIQPLVERVDRDGVSEVILALTPSVEGDTTSLYLARLLKPF-TQVSRIAYG 119 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 +P+GSEL+Y D+ T+ A+ R + Sbjct: 120 LPVGSELEYADEVTLARALEGRRRM 144 >gi|188527748|ref|YP_001910435.1| recombination protein RecR [Helicobacter pylori Shi470] gi|238691933|sp|B2UU73|RECR_HELPS RecName: Full=Recombination protein recR gi|188143988|gb|ACD48405.1| recombination protein RecR [Helicobacter pylori Shi470] Length = 193 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEI 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|317014334|gb|ADU81770.1| recombination protein RecR [Helicobacter pylori Gambia94/24] Length = 193 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++ Sbjct: 124 KRLVGENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|254779526|ref|YP_003057632.1| recombination protein RecR [Helicobacter pylori B38] gi|254001438|emb|CAX29433.1| Recombination protein RecR [Helicobacter pylori B38] Length = 193 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCVSCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|108563331|ref|YP_627647.1| recombination protein RecR [Helicobacter pylori HPAG1] gi|122386389|sp|Q1CSU9|RECR_HELPH RecName: Full=Recombination protein recR gi|107837104|gb|ABF84973.1| recombinational DNA repair protein [Helicobacter pylori HPAG1] Length = 193 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|71894077|ref|YP_278185.1| recombination protein RecR [Mycoplasma synoviae 53] gi|71850865|gb|AAZ43474.1| putative recombination protein [Mycoplasma synoviae 53] Length = 194 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 3/192 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 IE I + +IPG + A + ++ K+ + L+ + + + CS C Sbjct: 6 LIEEFITKIRKIPGISRKQAEKIVAWILYSKDDEIYELSNYFKKLKDNISFCSFCNIPQE 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC D R+ ++ VVE+ + LE+ Y V + + + + Sbjct: 66 NNNCYICNDTSRENKLL-VVENPLIIEKLEKLSLFKGKYFVFKNLVKNEKSLDKFYLDLS 124 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L++ K E+IF IS T+EG+ T + I + + + ++LA GIP+G+ +DY+D+ Sbjct: 125 KLLKYC--KNFEEVIFGISPTLEGEVTTNLIRKEFEKFQINSSQLAIGIPIGASIDYMDE 182 Query: 189 GTIFEAIRSRTV 200 T+ +I++R Sbjct: 183 ITLKFSIKNRQK 194 >gi|307637615|gb|ADN80065.1| Recombination protein [Helicobacter pylori 908] gi|325996209|gb|ADZ51614.1| Recombination protein [Helicobacter pylori 2018] gi|325997803|gb|ADZ50011.1| Recombination protein [Helicobacter pylori 2017] Length = 193 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|298736120|ref|YP_003728645.1| recombination protein recr [Helicobacter pylori B8] gi|298355309|emb|CBI66181.1| Recombination protein recR [Helicobacter pylori B8] gi|317180227|dbj|BAJ58013.1| recombination protein RecR [Helicobacter pylori F32] Length = 193 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEI 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + T++A G+P G + +D ++ Sbjct: 124 KRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|224438029|ref|ZP_03658968.1| recombination protein RecR [Helicobacter cinaedi CCUG 18818] gi|313144474|ref|ZP_07806667.1| recombination protein recR [Helicobacter cinaedi CCUG 18818] gi|313129505|gb|EFR47122.1| recombination protein recR [Helicobacter cinaedi CCUG 18818] Length = 199 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 10/205 (4%) Query: 1 MQKKITG-KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + +LI L ++P G +SA++ L + + L +A A+ N V Sbjct: 1 MNSYKSSLRAFADLIAALEKLPTIGKKSAQKMAYSLCVENKFLGLNIAHAIENAALVVKK 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C+ C + ++ C IC+D R + +V + D++ +E Y VL + Sbjct: 61 CNKCLGLSESEICEICLDDTRQNGELCIVANSRDIFTIEEMGEFQGRYFVLDS------Q 114 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI---DVKITRLAYG 176 E I L RI+ + I E+IFA++ ++ + YI DK+K ++ +++A G Sbjct: 115 QDLEQIDFSLLNHRIQAESIHEIIFALTPSLANEAIMLYIEDKIKPPLDTPLQFSKIAQG 174 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 +P G LD +D ++ A+ SR L Sbjct: 175 VPTGIGLDSIDQLSLLAALNSRVKL 199 >gi|308184709|ref|YP_003928842.1| recombination protein RecR [Helicobacter pylori SJM180] gi|308060629|gb|ADO02525.1| recombination protein RecR [Helicobacter pylori SJM180] Length = 193 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + ++ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 C IC D+ R S + +V D++ LE K Y+VL E++ +L Sbjct: 73 CEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++ Sbjct: 124 KRLIGEDIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|218507696|ref|ZP_03505574.1| recombination protein RecR [Rhizobium etli Brasil 5] Length = 146 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 99/146 (67%), Positives = 119/146 (81%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 M K++TG EIE LI++LA++PG GPRSARRA LHL+KKK+QLLGPL+ AM Y+KV +C Sbjct: 1 MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSNAMGEAYDKVKIC 60 Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S CGNVDT DPC +C D QRD SVIIVVEDV+DLWALER+ A+NA YHVLGG+LSPLD I Sbjct: 61 SRCGNVDTVDPCTVCTDAQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGI 120 Query: 121 GPEDIGIQSLIERIEVKKIRELIFAI 146 GP+D+ I+ LI RI IRELI A+ Sbjct: 121 GPDDLNIRGLIHRIGEGGIRELIIAV 146 >gi|15611926|ref|NP_223577.1| recombination protein RecR [Helicobacter pylori J99] gi|6685855|sp|Q9ZKS6|RECR_HELPJ RecName: Full=Recombination protein recR gi|4155437|gb|AAD06442.1| RECOMBINATION PROTEIN [Helicobacter pylori J99] Length = 193 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + C+ C + T+ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALRNALENLKTCASCNALSETEV 72 Query: 72 CAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLI 131 IC D+ R S + +V D++ LE K Y+VL ED+ +L Sbjct: 73 SEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSI---------EDVDFNALE 123 Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ + I+E+IFA T+ + YI DKL+ + + T++A G+P G + +D ++ Sbjct: 124 KRLIGENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSL 183 Query: 192 FEAIRSRTV 200 A SR Sbjct: 184 SRAFNSRIK 192 >gi|313664898|ref|YP_004046769.1| recombination protein RecR [Mycoplasma leachii PG50] gi|312950058|gb|ADR24654.1| putative recombination protein RecR [Mycoplasma leachii PG50] Length = 196 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 3/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++ + G +++ R ++L+ K++ L + + + C ICG Sbjct: 1 MPESIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDK-LNEFINQLNKVSQLISTCKICG 59 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + C +C R+ ++I +V + D +E + +YH+L G ++ I + Sbjct: 60 YLSENEKCLVCSLDNRNQNIICIVSTILDAKNIETANKYKGVYHILNGEINLNKNITFDK 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + I S+ +R+ E+I A+++T EG+ TA+Y+ L +VKITRLA G+PMG+ LD Sbjct: 120 LNISSIFKRV--NDNTEIILALNSTFEGELTANYLYKLLSTKNVKITRLAKGMPMGASLD 177 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ T+ A +R Sbjct: 178 YMDEFTLQSAFINRKK 193 >gi|294155948|ref|YP_003560332.1| recombination protein RecR [Mycoplasma crocodyli MP145] gi|291600313|gb|ADE19809.1| recombination protein RecR [Mycoplasma crocodyli MP145] Length = 193 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 3/196 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I NLI ++ I R A + ++ ++ + L A+ + + CSIC Sbjct: 1 MENNPINNLISLVKNIDTVSKRQAEKIVSWIINCPKEQINELVSAINLVKTNINKCSICT 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ T + C IC + R ++++VVE+ ++ +E ++ N Y V + P + Sbjct: 61 NLTTNEVCEICTSEDR-DNILMVVENFNNIKKIEENEIFNGKYFVFSELIKPKKTSQDIE 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L + E+I AIS T+EG+ T ++ LK + ++ ++ GIP+G+ +D Sbjct: 120 KKAEELAQF--SANFDEVILAISPTLEGEITNEFLRKYLKNRKINVSSISIGIPVGANID 177 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D ++ ++I +R Sbjct: 178 YIDSISLKQSIINRRK 193 >gi|32267017|ref|NP_861049.1| recombination protein RecR [Helicobacter hepaticus ATCC 51449] gi|32263069|gb|AAP78115.1| recombination protein RecR [Helicobacter hepaticus ATCC 51449] Length = 195 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%) Query: 1 MQKKITG-KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + K LI L ++P G +SA++ L + + L +A A+ N V Sbjct: 1 MNQYKSSLKAFSELISTLEKLPAIGKKSAQKMAYALCMENKFLGLNIAHAIENAALLVQK 60 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C + ++ C IC+D R+ + +V + D++ LE Y VL + Sbjct: 61 CHKCFGISESEICDICLDSSRENGELCIVANPRDIFTLEDMGEFKGRYFVLDS------Q 114 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPM 179 E I L +RI+ + +RE+IFA+S ++ + YI DK+K + + +++A G+P Sbjct: 115 GDLEQIDFTLLNQRIDTESVREIIFALSPSLANEAIMLYIEDKIK-MPLHFSKIAQGVPT 173 Query: 180 GSELDYLDDGTIFEAIRSRTVL 201 G LD +D ++ A+ R L Sbjct: 174 GIGLDAIDQLSLSRAMSLRVKL 195 >gi|330940612|gb|EGH43654.1| recombination protein RecR [Pseudomonas syringae pv. pisi str. 1704B] Length = 154 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 2/153 (1%) Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHV 109 M + V C C + + C C D +RD +++ VVE D++A+E++ Y V Sbjct: 1 MGQAMDGVGHCRSCRTLTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFV 59 Query: 110 LGGSLSPLDRIGPEDIGIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDV 168 L G LSPLD +GPE IGI L+ER+ + E+I A + T+EG+ TAHYI L + Sbjct: 60 LKGHLSPLDGLGPEAIGIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGL 119 Query: 169 KITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +R+A+G+P+G ELD +D GT+ + R + Sbjct: 120 VASRIAHGVPLGGELDLVDGGTLAHSFAGRKPI 152 >gi|240047505|ref|YP_002960893.1| recombination protein RecR [Mycoplasma conjunctivae HRC/581] gi|239985077|emb|CAT05070.1| Recombination protein [Mycoplasma conjunctivae] Length = 194 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 5/196 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + G + E L K + +PG G + + + L+ + E + N+ C C Sbjct: 1 MYGNDFEELAKKIKILPGVGKKQSEKILHFLLDAPIDDINTFIEELYNLKKNFQHCRQCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 V C+IC+D QR+ I+VVE+ + E S Y VLG + + D Sbjct: 61 FVSRNRLCSICLDDQRENK-ILVVENSDIVAKFENSGEYKGRYFVLGD--FNIKNLSALD 117 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 I L I ELI IS+T++G YI ++KI++LA GIP G+ +D Sbjct: 118 DKINQLK--IMANNDSELILGISSTLDGLIVTSYITKHEVVANLKISQLATGIPFGANID 175 Query: 185 YLDDGTIFEAIRSRTV 200 YLD T+ +A+++R Sbjct: 176 YLDKITLQQALKNRRE 191 >gi|293364018|ref|ZP_06610754.1| recombination protein RecR [Mycoplasma alligatoris A21JP2] gi|292552508|gb|EFF41282.1| recombination protein RecR [Mycoplasma alligatoris A21JP2] Length = 194 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 3/192 (1%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT 68 IE +I++L R+ G + A R +++ + + L ++ + N+V C CGN+ Sbjct: 6 SIEKIIELLKRVDGISKKQAERILSWVIQSDIKDVETLLNSIKTLKNEVKECKRCGNLTA 65 Query: 69 TDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 + C IC+D+ R +V++VVE + +E+ + N Y V L+ + + Sbjct: 66 SGVCNICLDEDR-DNVLLVVEHFNIIKKMEKEEIYNGKYFVFKELLNIKNFNEKIEKYAY 124 Query: 129 SLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDD 188 L E K E+I AIS T+EG T Y+ L + T ++ G+P+G+ LDY+D Sbjct: 125 ELAEY--GKNFEEVILAISPTLEGAITNEYLKKYLTSKKINATSISIGVPVGASLDYIDK 182 Query: 189 GTIFEAIRSRTV 200 TI ++I +R Sbjct: 183 ITIKQSIENRRK 194 >gi|254360628|ref|ZP_04976777.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213] gi|153091168|gb|EDN73173.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213] Length = 147 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Query: 58 CLCSICGNVDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSP 116 C C + C IC + +R S + VVE D+ A+E++ + Y VL G LSP Sbjct: 1 GHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSP 60 Query: 117 LDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 +D IGP +IG+ L +R+E + E+I A + TIEG TA+YI + + +VK TR+A+G Sbjct: 61 IDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEMCRMYNVKATRIAHG 120 Query: 177 IPMGSELDYLDDGTIFEAIRSRTVL 201 +P+G L+ +D T+ + R + Sbjct: 121 VPVGGSLEMVDGTTLSHSFAGRRDI 145 >gi|134147639|gb|ABO63960.1| RecR [Bacillus thuringiensis] gi|134147641|gb|ABO63961.1| RecR [Bacillus thuringiensis] Length = 152 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 88/146 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP++A R ++ KE + A+A+ N + CS+CG+ Sbjct: 3 YPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SV+ VV++ D+ A+E+ K +YHVL G++SP++ IGPEDI Sbjct: 63 ITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMEGIGPEDI 122 Query: 126 GIQSLIERIEVKKIRELIFAISATIE 151 I L++R+ + ++E+I A + IE Sbjct: 123 NIPQLLKRLHDETVQEVILATNPGIE 148 >gi|237750811|ref|ZP_04581291.1| recombination protein RecR [Helicobacter bilis ATCC 43879] gi|229373256|gb|EEO23647.1| recombination protein RecR [Helicobacter bilis ATCC 43879] Length = 178 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 9/183 (4%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICI 76 L ++P G +SAR+ L + L +A+A+ + + C +CG + + C IC+ Sbjct: 3 LKKMPTIGKKSARKMAYTLAIENAPLGLQIAQAIHDCIATIEKCKVCGALSHGEICHICL 62 Query: 77 DQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEV 136 D R + +V D++ +E + +Y V+ + LI+RI+ Sbjct: 63 DSTRKNGTLCIVSHPKDVFLIEDIGEFHGVYCVIEDY---------KHCDFTDLIQRIKD 113 Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIR 196 + I E+IFA ++E +I +KL + +K +++A G+P LD +D ++ A Sbjct: 114 ENIEEVIFAFMPSLESDIVVMFIQEKLADLCLKFSKIAQGVPSNVSLDNIDHFSLARAFN 173 Query: 197 SRT 199 +R Sbjct: 174 ARV 176 >gi|71893606|ref|YP_279052.1| recombination protein RecR [Mycoplasma hyopneumoniae J] gi|71851733|gb|AAZ44341.1| recombination protein [Mycoplasma hyopneumoniae J] Length = 194 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 5/197 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +NL + L +IPG + A R LV + + A+ ++ C CG Sbjct: 1 MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAIYDLKKNTQYCEKCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++T C IC+D QR I+VVE+ + E + Y V G D E+ Sbjct: 61 YLNTNPVCEICLDFQRSFK-ILVVENTEMIAKFEEYGKYDGQYFVFGKY----DIKNLEN 115 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 Q E+I +S+T+EG A+Y+ +KITRLA GIP G+ +D Sbjct: 116 HNAQIKKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIID 175 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D+ T+ +A+++R + Sbjct: 176 YIDNITLDQALKNRQEM 192 >gi|242308884|ref|ZP_04808039.1| recombination protein RecR [Helicobacter pullorum MIT 98-5489] gi|239524548|gb|EEQ64414.1| recombination protein RecR [Helicobacter pullorum MIT 98-5489] Length = 190 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 9/199 (4%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K + L++ L ++P G +SA R L + + +A + + ++ +C Sbjct: 1 MKSIPESFAKLVESLEKLPSIGKKSAMRLAYFLAFEDKLSALQIAHNIESCMQELRICEE 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 C + C IC + R+ + ++ +++ LE S N Y V+ Sbjct: 61 CFGISKEPICEICSNSMRNNGELCIIASPKEIFLLEESGEFNGKYFVITSL--------- 111 Query: 123 EDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSE 182 E + +++L +I IRE+IFA+S ++ + Y+ DKL +D++ T++A G+P G Sbjct: 112 ETLDMKALERKIIKNNIREIIFALSPSLSSDSLMLYLEDKLSHLDLQFTKIAQGVPTGVS 171 Query: 183 LDYLDDGTIFEAIRSRTVL 201 L+ +D +I A++SR + Sbjct: 172 LENIDQLSIIRALQSRVKI 190 >gi|54020351|ref|YP_115635.1| recombination protein RecR [Mycoplasma hyopneumoniae 232] gi|53987524|gb|AAV27725.1| recombination protein recR [Mycoplasma hyopneumoniae 232] Length = 194 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 5/197 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +NL + L +IPG + A R LV + + A+ ++ C CG Sbjct: 1 MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++T C IC+D QR I+VVE+ + E + Y V G D E+ Sbjct: 61 YLNTNPVCEICLDFQRSFK-ILVVENTEMIAKFEEYGKYDGQYFVFGKY----DIKNLEN 115 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 Q E+I +S+T+EG A+Y+ +KITRLA GIP G+ +D Sbjct: 116 HNTQIKKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIID 175 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D+ T+ +A+++R + Sbjct: 176 YIDNITLDQALKNRQEM 192 >gi|72080597|ref|YP_287655.1| recombination protein RecR [Mycoplasma hyopneumoniae 7448] gi|71913721|gb|AAZ53632.1| recombination protein recR [Mycoplasma hyopneumoniae 7448] gi|312601233|gb|ADQ90488.1| Recombination protein recR [Mycoplasma hyopneumoniae 168] Length = 194 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 5/197 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +NL + L +IPG + A R LV + + A+ ++ C CG Sbjct: 1 MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCG 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 ++T C IC+D QR I+VVE+ + E + Y V G D E+ Sbjct: 61 YLNTNPVCEICLDFQRSFK-ILVVENTEMIAKFEEYGKYDGQYFVFGKY----DIKNLEN 115 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 Q E+I +S+T+EG A+Y+ +KITRLA GIP G+ +D Sbjct: 116 HNAQIKKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIID 175 Query: 185 YLDDGTIFEAIRSRTVL 201 Y+D+ T+ +A+++R + Sbjct: 176 YIDNITLDQALKNRQEM 192 >gi|26554261|ref|NP_758195.1| recombination protein RecR [Mycoplasma penetrans HF-2] gi|26454270|dbj|BAC44599.1| recombinational DNA repair protein RecR [Mycoplasma penetrans HF-2] Length = 201 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 3/200 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + KE E ++ L +P ++A + ++ E + + ++ + + C C Sbjct: 1 MKPKEFEYFVEALKSLPTISNKNASKIAYFFLEADEVFYSQFLDRLTSLKSNIKFCLNCN 60 Query: 65 N-VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 N + C IC RD + + +V + DL +E S + + LY VL + D + Sbjct: 61 NLTSDSLYCDICNTDSRDKNKLCIVSYLEDLEKIEASNSFSGLYFVLNTEIKHKDLKTAK 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGS 181 I ++ L I +RE++ + TI+G+ T+ YI + + K ++ + RLA GIPM + Sbjct: 121 KINLEKLENMINKFHVREILICTNMTIDGELTSSYIKNFIKEKNYNIDLYRLALGIPMNA 180 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 ++Y+D ++ +I ++ + Sbjct: 181 SIEYIDWESLKYSIENKRKI 200 >gi|313678823|ref|YP_004056563.1| recombination protein RecR [Mycoplasma bovis PG45] gi|312950566|gb|ADR25161.1| putative recombination protein RecR [Mycoplasma bovis PG45] Length = 195 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 1/196 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + K I L K L IP + A + + +++K ++ + E + +K+ C C Sbjct: 1 MEIKTINELTKKLISIPTITKKQAEKLSDYILKASKEEISSTLEFILEAKDKIGFCEKCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C C D+ + +I+VE VA + + + N ++VL LS + + D Sbjct: 61 FIVENGKCVNC-DRFNLWNTLIIVESVASVKKIFDTDFYNGYFYVLPYLLSVVPKDAKID 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 + L++ I++K+I E+I +S TIEGQ T +M + IDVK TR A G+P+ S ++ Sbjct: 120 FNYEHLVKFIKLKRINEVIIVLSPTIEGQMTTAQLMQICREIDVKATRAAVGLPLNSNIE 179 Query: 185 YLDDGTIFEAIRSRTV 200 Y+D+ TI +AI +RT Sbjct: 180 YIDEFTIKQAIENRTK 195 >gi|255024678|ref|ZP_05296664.1| recombination protein RecR [Listeria monocytogenes FSL J1-208] Length = 139 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 54/137 (39%), Positives = 84/137 (61%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + I LI ++PG GP+SA R +++ KE + A+A+ + + CS+CG+ Sbjct: 3 YPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGH 62 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPC IC D RD SVI VV++ D+ A+E+ + + LYHVL G++SP+D IGPEDI Sbjct: 63 ITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDI 122 Query: 126 GIQSLIERIEVKKIREL 142 I L++R++ I E+ Sbjct: 123 NIPDLLKRLQDDTIEEV 139 >gi|153803673|ref|ZP_01958259.1| recombination protein RecR [Vibrio cholerae MZO-3] gi|124120792|gb|EAY39535.1| recombination protein RecR [Vibrio cholerae MZO-3] Length = 143 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 1/141 (0%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTT 69 +E+L++ L +PG GP+SA+R HL+++ + LAEA++ ++ C C Sbjct: 2 LEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMVEIGHCQECRTFTEQ 61 Query: 70 DPCAICIDQQR-DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 D C IC + +R + + VVE AD+ ALE + + Y VL G LSPLD IGP DIG+ Sbjct: 62 DVCHICRNPKRKENGQLCVVESPADIAALEATGQFSGRYFVLMGHLSPLDGIGPSDIGLD 121 Query: 129 SLIERIEVKKIRELIFAISAT 149 +L R++ I E+I A + T Sbjct: 122 TLDYRLQRGDISEVILATNPT 142 >gi|195952624|ref|YP_002120914.1| recombination protein RecR [Hydrogenobaculum sp. Y04AAS1] gi|195932236|gb|ACG56936.1| recombination protein RecR [Hydrogenobaculum sp. Y04AAS1] Length = 223 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 26/223 (11%) Query: 1 MQ-KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 M + + + ++ + IPG+G ++A R +K + + +++ N+ + Sbjct: 1 MAFEDFIPRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENL-FSITT 59 Query: 60 CSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDR 119 C C + + CAIC + +R I VVE+ D + +E+ + +YH+LGG +SPL+ Sbjct: 60 CKECNILTDQEVCAICSNPKRSKKYIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEG 119 Query: 120 IGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID------------ 167 I PED+ I+ L ERI +E+I A + EG+ TA+Y++ +K ++ Sbjct: 120 IAPEDLSIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTS 179 Query: 168 ------------VKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 KITR+A I G+ ++Y+DD ++ E+I R Sbjct: 180 MPRTTSLPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKR 222 >gi|313668352|ref|YP_004048636.1| recombination protein [Neisseria lactamica ST-640] gi|313005814|emb|CBN87268.1| putative recombination protein [Neisseria lactamica 020-06] Length = 172 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 89/167 (53%) Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADL 94 +++ K + L +A+ +V C+ C C IC D+ RD ++VV AD+ Sbjct: 1 MLQHKRKEAEKLVDALQTALKQVNHCARCNTFCEGGLCDICADETRDGRRLMVVHMPADV 60 Query: 95 WALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQT 154 +E + + LY VL G ++ + I + L +R+ ++ E+I A + T EG Sbjct: 61 SNMEAANCHDGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNA 120 Query: 155 TAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 TA+ + + K + K++RL+ GIP+G EL+Y+D GT+ +A+ R ++ Sbjct: 121 TAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLI 167 >gi|289678893|ref|ZP_06499783.1| recombination protein RecR [Pseudomonas syringae pv. syringae FF5] Length = 138 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 2/137 (1%) Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE I Sbjct: 1 MTEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAI 59 Query: 126 GIQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELD 184 GI L+ER+ + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 60 GIPQLMERVSQQGTFTEVILATNPTVEGEATAHYIAQLLHDKGLVASRIAHGVPLGGELD 119 Query: 185 YLDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 120 LVDGGTLAHSFAGRKPI 136 >gi|330876081|gb|EGH10230.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str. race 4] Length = 137 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 2/136 (1%) Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIG 126 + C C D +RD +++ VVE D++A+E++ Y VL G LSPLD +GPE IG Sbjct: 1 TEEELCPQCADPRRDDTLLCVVEGPTDVYAVEQTG-YRGRYFVLKGHLSPLDGLGPEAIG 59 Query: 127 IQSLIERIEVKK-IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I L+ERI + E+I A + T+EG+ TAHYI L + +R+A+G+P+G ELD Sbjct: 60 IPQLMERISQQGTFTEVILATNPTVEGEATAHYIAQLLHEKGLVASRIAHGVPLGGELDL 119 Query: 186 LDDGTIFEAIRSRTVL 201 +D GT+ + R + Sbjct: 120 VDGGTLAHSFAGRKPI 135 >gi|256004181|ref|ZP_05429165.1| Zinc finger C4-type, RecR [Clostridium thermocellum DSM 2360] gi|255991929|gb|EEU02027.1| Zinc finger C4-type, RecR [Clostridium thermocellum DSM 2360] Length = 122 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 72/122 (59%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 I LI+ ++PG G ++A+R +++ ++ + LA A+ K CS+ Sbjct: 1 MSFYAAPIARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSV 60 Query: 63 CGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGP 122 CGN+ TD C +C ++RD+SVI VVED D+ A+E+ + LYHVL G++SP+ IGP Sbjct: 61 CGNLTDTDVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGP 120 Query: 123 ED 124 ED Sbjct: 121 ED 122 >gi|110003915|emb|CAK98255.1| putative recombination protein recr dna repair [Spiroplasma citri] Length = 174 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 1/163 (0%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 L I G G ++A R L+ K LL L I N C IC + + C C Sbjct: 2 ELKTILGVGKKTAERIFNKLIIKP-SLLQTLEHVFNEIKNNYHQCPICSTLMQNNVCLFC 60 Query: 76 IDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIE 135 + RD + + VV + D+ +E +K N +YHVL G ++ + I P+ + L R+ Sbjct: 61 HNDLRDQTKLCVVSNFFDIIKIEATKVFNGVYHVLNGEINVKNGITPDKMTFPVLESRMN 120 Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 K I+E+I A+ AT EG+ TA Y+ L+ D+KI+RLA GIP Sbjct: 121 DKIIKEVIIAVGATFEGEVTAQYLKTFLQSFDIKISRLAQGIP 163 >gi|193216550|ref|YP_001999792.1| recombination protein RecR [Mycoplasma arthritidis 158L3-1] gi|193001873|gb|ACF07088.1| recombination protein RecR [Mycoplasma arthritidis 158L3-1] Length = 196 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 5/198 (2%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + + L L I G + +++ + L +A + I C C Sbjct: 1 MYDELLNKLTIKLKAIQGLNKKQITAIVEYILNAESGELDDIAMLIKTIKTTYKKCLFCN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N + + C IC D R+ ++ VVE+ + E ++ Y +L +P + Sbjct: 61 NFSSQEKCEICSDSTRENKLM-VVENAKTIKQFEVAQIYRGKYFILEALYNPKKPNLLFN 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDV--KITRLAYGIPMGSE 182 ++ L+ + K E++ A+S TIEG T Y+ L+ + + +LA GIP+G Sbjct: 120 KNLEKLL--LIATKANEVVLALSPTIEGAITMDYLKKSLRDANNMHNVYQLATGIPLGVN 177 Query: 183 LDYLDDGTIFEAIRSRTV 200 ++Y+D T+ ++ +T Sbjct: 178 VEYIDSETLKQSFLKKTK 195 >gi|33322897|gb|AAQ07185.1|AF496493_1 recombination protein M [Lactobacillus delbrueckii subsp. lactis] Length = 131 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 77/130 (59%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI ++PG G ++A R + + ++ + A+A+ ++ K+ CS+CGN Sbjct: 2 YPLPIARLIDSFMKLPGIGEKTATRLAFYAMDMPKEDVDEFAQALVDVKEKLRQCSVCGN 61 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 + DPCAIC + RD S I+VVE+ D+ A E + LYHVL G LSP+D IGPE I Sbjct: 62 ITEQDPCAICSNPARDRSTIMVVEEAKDVMAFENMGEYDGLYHVLHGVLSPMDGIGPEQI 121 Query: 126 GIQSLIERIE 135 I+SLI R++ Sbjct: 122 NIKSLIVRLQ 131 >gi|213018575|ref|ZP_03334383.1| recombination protein RecR [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995526|gb|EEB56166.1| recombination protein RecR [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 118 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 56/117 (47%), Positives = 85/117 (72%) Query: 85 IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIF 144 + VVE++ DLWA E+ + +YHVLGG LS ++ IGP+++ + ++ +R+ KI E+I Sbjct: 1 MCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDNIPKRVTEFKIEEVII 60 Query: 145 AISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 AI+ T+EGQ TA YI++ LK +VKI+RLA GIP+G E+DYLD+GT+ A+ SR + Sbjct: 61 AINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDYLDEGTLKIALTSRQDI 117 >gi|255018815|ref|ZP_05290941.1| recombination protein RecR [Listeria monocytogenes FSL F2-515] Length = 106 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 66/96 (68%) Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164 LYHVL G++SP+D IGPEDI I L++R++ I E+I A + +EG+ TA YI LK Sbjct: 10 GLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLK 69 Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 +K+TR+A+G+P+G +L+Y D+ T+ +A+ R Sbjct: 70 PSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRRE 105 >gi|322382241|ref|ZP_08056154.1| hypothetical protein PL1_3204 [Paenibacillus larvae subsp. larvae B-3650] gi|321153822|gb|EFX46190.1| hypothetical protein PL1_3204 [Paenibacillus larvae subsp. larvae B-3650] Length = 105 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 44/104 (42%), Positives = 72/104 (69%) Query: 97 LERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTA 156 +ER+K + YHVL G++SP++ IGP+ I I L++R+ +K++ELI A + IEG+ TA Sbjct: 1 MERTKEFDGYYHVLHGAISPMEGIGPDQIHIAELLKRLGDEKVQELILATNPNIEGEATA 60 Query: 157 HYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 YI +KG +K+TR+A G+P+G +L+Y D+ T+ +A+ R Sbjct: 61 MYISRLVKGFGLKVTRIARGLPVGGDLEYADEVTLSKALEGRRE 104 >gi|17232469|ref|NP_489017.1| recombination protein [Nostoc sp. PCC 7120] gi|17134115|dbj|BAB76676.1| recombination protein [Nostoc sp. PCC 7120] Length = 108 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 72/108 (66%), Gaps = 1/108 (0%) Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQ 153 + ALE+++ YHVLGG +SP+D IGPE + I L+ R+ ++ +E+I AIS ++EG+ Sbjct: 1 MIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQQQPKEVILAISPSVEGE 60 Query: 154 TTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 TT Y+ LK K+TR+A+G+P+G +L+Y D+ T+ A+ R L Sbjct: 61 TTTLYVGQLLKPF-TKVTRIAFGLPVGGDLEYADEITLARALEGRREL 107 >gi|217033112|ref|ZP_03438575.1| hypothetical protein HPB128_8g3 [Helicobacter pylori B128] gi|216945155|gb|EEC23848.1| hypothetical protein HPB128_8g3 [Helicobacter pylori B128] Length = 162 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 9/170 (5%) Query: 31 ATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED 90 HL + L + A+ N + C+ C + ++ C IC D+ R S + +V Sbjct: 1 MAYHLGLENPYLALKITHALENALENLKTCASCNALSESEICEICSDESRQNSQLCMVLH 60 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 D++ LE K Y+VL E++ +L +R+ + I+E+IFA T+ Sbjct: 61 PRDVFILEDLKDFLGRYYVLNSI---------EEVDFNALEKRLIEENIKEIIFAFPPTL 111 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 + YI DKL+ + T++A G+P G + +D ++ A SR Sbjct: 112 ANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIK 161 >gi|146321217|ref|YP_001200928.1| recombinational DNA repair protein (RecF pathway) [Streptococcus suis 98HAH33] gi|145692023|gb|ABP92528.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus suis 98HAH33] Length = 135 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 79/134 (58%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + ++ ++ A+ + + CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLSYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 N+ DPCAIC D RD S I++VED D+ ALE + + LYHVL G +SP++ IGP+D Sbjct: 62 NLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDD 121 Query: 125 IGIQSLIERIEVKK 138 I +++L+ R+ + Sbjct: 122 INLKTLLTRLMENE 135 >gi|172041590|ref|YP_001801304.1| recombination protein RecR [Corynebacterium urealyticum DSM 7109] gi|171852894|emb|CAQ05870.1| recombination protein [Corynebacterium urealyticum DSM 7109] Length = 273 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKE-QLLGPLAEAMANIYNKVCLCSIC 63 + ++++I A +PG GP+SA+R LHL++ + + + N+++ V C IC Sbjct: 1 MFEGPLQDVIDEFASLPGIGPKSAQRIALHLLENATGEDIERFQATLGNLHSGVAFCRIC 60 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPE 123 N+ D C IC D RDAS++ VVE+ D+ +ER+ YHVLGG+L PL+ +GP Sbjct: 61 HNISQEDVCRICADSSRDASLVCVVEEPKDIQVIERTGEYRGRYHVLGGALDPLNGVGPG 120 Query: 124 DIGIQSLIERIEVKKIRELIFAISATIEG 152 ++ + +L++RI + A A+ G Sbjct: 121 ELNVTALVQRIGGVLPDVAVSAPHASAGG 149 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 131 IERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGI-DVKITRLAYGIPMGSELDYLDDG 189 +E E +I E+I A EG+ TA Y+ LK + ++RLA GIPMG +L+++D+ Sbjct: 200 VEYREAPEITEVIIATDPNTEGEATASYLGRLLKEFPGLTVSRLASGIPMGGDLEFVDEL 259 Query: 190 TIFEAIRSRTVL 201 T+ A RT L Sbjct: 260 TLSRAFAGRTQL 271 >gi|269114871|ref|YP_003302634.1| Recombination protein recR [Mycoplasma hominis] gi|268322496|emb|CAX37231.1| Recombination protein recR [Mycoplasma hominis ATCC 23114] Length = 196 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 7/200 (3%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + EI+ L ++L + F + +++ ++ K + + + + + N + C+IC Sbjct: 1 MNNIEIQKLEELLKTVFDFTKKQSQKFIFNIFKSSSEDIDQICNQIKALRNSIKKCNICN 60 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + C IC+D R ++ +V + D+ E Y V ++S + Sbjct: 61 RYNENTICNICLDTNRTKQLM-LVGNSLDIDKFENIGLYKGKYFVFDQNISLKNEDFIVS 119 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKIT---RLAYGIPMGS 181 ++ LI+ ++ K ELI ++S TIEGQ HYI LK + T +L+ GIP+GS Sbjct: 120 SLLEKLIDILKDKN--ELILSLSPTIEGQFNMHYIKKFLKN-KINFTNVFQLSTGIPLGS 176 Query: 182 ELDYLDDGTIFEAIRSRTVL 201 ++Y+D T+ E++ ++ + Sbjct: 177 SVEYIDQDTLKESLLNKIKM 196 >gi|227328732|ref|ZP_03832756.1| recombination protein RecR [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 179 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +E+L++ L +PG GP+SA+R L+++ LA+A+ +++ CS C Sbjct: 3 TSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDCRT 62 Query: 66 VDTTDPCAICIDQQRDAS-VIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 D CAIC + +R + I VVE AD+ A+E++ Y VL G LSPLD I P Sbjct: 63 FTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIWPGR 122 Query: 125 IGI 127 Sbjct: 123 YRF 125 >gi|317052105|ref|YP_004113221.1| Zinc finger C4-type protein RecR [Desulfurispirillum indicum S5] gi|316947189|gb|ADU66665.1| Zinc finger C4-type, RecR [Desulfurispirillum indicum S5] Length = 208 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 2/197 (1%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 +E L + LA+IPG G ++A R L + + A + N++ C C Sbjct: 2 YALPSVELLAQGLAQIPGIGQKTAERFALEVAAMAPAKRQAIVRAFEELENRLIACDECH 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + + PC +C + R+ + VVE DL A+E + LYHVLGG +SP+ P+D Sbjct: 62 TLAESSPCPLCRNTSRNRRQLCVVETFHDLVAIENAGVYEGLYHVLGGKVSPVAHCSPQD 121 Query: 125 IGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKL--KGIDVKITRLAYGIPMGSE 182 + +Q+L +RI + E+I A S T E + T + + + ++T + +P+G+ Sbjct: 122 LFLQTLPQRIRELGVAEVIIAASHTPESRITMELVKRSVLSAKTNTQVTFFSSLLPVGAP 181 Query: 183 LDYLDDGTIFEAIRSRT 199 L + +A +R Sbjct: 182 LSICAVDILKKAFHARK 198 >gi|89892381|gb|ABD78970.1| HI0443-like protein [Haemophilus influenzae] Length = 109 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 67/106 (63%) Query: 96 ALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTT 155 A+E++ + Y VL G LSPLD IGP +IG+ L +R+ + E+I A + T+EG T Sbjct: 3 AIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGDAT 62 Query: 156 AHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 A+YI + + ++K++R+A+GIP+G EL+ +D T+ + R + Sbjct: 63 ANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQI 108 >gi|309798671|ref|ZP_07692938.1| recombination protein RecR [Streptococcus infantis SK1302] gi|308117717|gb|EFO55126.1| recombination protein RecR [Streptococcus infantis SK1302] Length = 133 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 70/125 (56%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + I LI +++PG G ++A R + + + + A+ + ++ CSICG Sbjct: 2 LYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICG 61 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPED 124 + DPC+IC D RD S I+V+ED D+ A+E + + LYHVL G +SP++ I P+D Sbjct: 62 RLTDDDPCSICTDPSRDQSTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDD 121 Query: 125 IGIQS 129 I ++ Sbjct: 122 INLKK 126 >gi|83749763|ref|ZP_00946739.1| RecR [Ralstonia solanacearum UW551] gi|83723583|gb|EAP70785.1| RecR [Ralstonia solanacearum UW551] Length = 156 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 70/132 (53%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T ++ L++ L +PG GP+SA+R HL++ + LAEA+A + CS C Sbjct: 8 TPSALQMLVEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIRHCSRCNT 67 Query: 66 VDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDI 125 D C C+D +RDASV+ VVE AD +E++ Y VL G LSPLD IGP Sbjct: 68 FTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPTGT 127 Query: 126 GIQSLIERIEVK 137 ++ L+ R Sbjct: 128 HLEPLLARATDP 139 >gi|149912023|ref|ZP_01900616.1| recombination protein RecR [Moritella sp. PE36] gi|149804884|gb|EDM64919.1| recombination protein RecR [Moritella sp. PE36] Length = 99 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164 Y VL G LSPLD IGP++IG+ L E + ELI A + T+EG+ TA+YI + + Sbjct: 2 GQYFVLMGHLSPLDGIGPDEIGLDKLAELLASGDYEELILATNPTVEGEATAYYIAEIAQ 61 Query: 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 VK +R+A+G+P+G EL+Y+D T+ ++ R ++ Sbjct: 62 EYGVKASRIAHGVPVGGELEYVDGTTLSHSLLGRQLI 98 >gi|213421304|ref|ZP_03354370.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 113 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 1/111 (0%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T + L++ L +PG GP+SA+R L+++ LA+A+ +++ C+ C Sbjct: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 Query: 66 VDTTDPCAICIDQQRD-ASVIIVVEDVADLWALERSKAVNALYHVLGGSLS 115 D C IC + +R I VVE AD++A+E++ + Y VL G LS Sbjct: 63 FTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLS 113 >gi|256004008|ref|ZP_05428993.1| recombination protein RecR [Clostridium thermocellum DSM 2360] gi|255991931|gb|EEU02028.1| recombination protein RecR [Clostridium thermocellum DSM 2360] Length = 76 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 51/76 (67%) Query: 126 GIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDY 185 I+ L++RI+ ++E+I A + IEG+ TA YI +K + VK TR+A+GIP+G +L+Y Sbjct: 1 KIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLEY 60 Query: 186 LDDGTIFEAIRSRTVL 201 D+ T+ +A+ R + Sbjct: 61 ADEVTLAKALEGRREI 76 >gi|262171931|ref|ZP_06039609.1| recombination protein recR [Vibrio mimicus MB-451] gi|261893007|gb|EEY38993.1| recombination protein recR [Vibrio mimicus MB-451] Length = 117 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 64/111 (57%) Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 ALE + + Y VL G LSPLD IG DI + +L R++ K I E+I A + T+ Sbjct: 6 RQIFAALEATGQFSGRYFVLMGHLSPLDGIGSSDIWLDTLDYRLQRKDISEVILATNPTV 65 Query: 151 EGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 EG+ TA YI + + V +R+A+G+P+G EL+ +D T+ ++ R L Sbjct: 66 EGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGRHKL 116 >gi|56807612|ref|ZP_00365515.1| COG0353: Recombinational DNA repair protein (RecF pathway) [Streptococcus pyogenes M49 591] Length = 87 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 38/87 (43%), Positives = 61/87 (70%) Query: 115 SPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLA 174 SP++ +GP+DI ++SLI R+ K+ E+I A +AT +G+ T+ YI LK +K+TRLA Sbjct: 1 SPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLA 60 Query: 175 YGIPMGSELDYLDDGTIFEAIRSRTVL 201 G+ +GS+++Y D+ T+ AI +RT L Sbjct: 61 RGLAVGSDIEYADEVTLLRAIENRTEL 87 >gi|238021753|ref|ZP_04602179.1| hypothetical protein GCWU000324_01656 [Kingella oralis ATCC 51147] gi|237866367|gb|EEP67409.1| hypothetical protein GCWU000324_01656 [Kingella oralis ATCC 51147] Length = 120 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 90 DVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149 AD+ A+E + + LY VL GS++P + + ++ LI R+ ++E+I A S T Sbjct: 1 MPADVAAMEAAHCHDGLYFVLMGSVNPTQNMDLSHVALEKLIARLADSPVQEIIIATSFT 60 Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 EG TA+ + + LK KI+RLA G+P+GSEL+Y+D GT+ +A+ R +L Sbjct: 61 AEGDATAYILTELLKEQPYKISRLARGMPLGSELEYVDAGTLAQAVYERQLL 112 >gi|225025708|ref|ZP_03714900.1| hypothetical protein EIKCOROL_02610 [Eikenella corrodens ATCC 23834] gi|224941489|gb|EEG22698.1| hypothetical protein EIKCOROL_02610 [Eikenella corrodens ATCC 23834] Length = 124 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 69/114 (60%) Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFA 145 ++V AD+ +E + + LY VL G +SP + + I + L+ R++ ++ E+I A Sbjct: 1 MIVHLPADVAGMEAAHCHDGLYFVLMGQISPAQGMDLQHIALDKLVARLQESEVEEVIIA 60 Query: 146 ISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 + T EG TA+ + + K + +++RLA G+P+GSEL+Y+D GT+ +++ R Sbjct: 61 TAFTPEGNATAYVLAELFKNLPYRVSRLAQGMPLGSELEYIDAGTLAQSVYERR 114 >gi|227328733|ref|ZP_03832757.1| recombination protein RecR [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 86 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 51/83 (61%) Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGI 177 GP+DIG+ L ER++V+ I E+I A + T+EG TA+YI + V +R+A+G+ Sbjct: 1 MAFGPDDIGLGRLEERLQVESISEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGV 60 Query: 178 PMGSELDYLDDGTIFEAIRSRTV 200 P+G EL+ +D T+ ++ R Sbjct: 61 PVGGELEMVDGTTLSHSLAGRQP 83 >gi|270676254|ref|ZP_06222702.1| Recombination protein recR [Haemophilus influenzae HK1212] gi|270316405|gb|EFA28301.1| Recombination protein recR [Haemophilus influenzae HK1212] Length = 68 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 41/66 (62%) Query: 136 VKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAI 195 + E+I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D T+ + Sbjct: 2 EESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSF 61 Query: 196 RSRTVL 201 R + Sbjct: 62 LGRRQI 67 >gi|146321216|ref|YP_001200927.1| recombination protein [Streptococcus suis 98HAH33] gi|145692022|gb|ABP92527.1| putative recombination protein [Streptococcus suis 98HAH33] Length = 64 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 43/63 (68%) Query: 139 IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSR 198 RE+I A +AT +G+ T+ YI LK +K+TRLA G+ +GS+++Y D+ T+ AI +R Sbjct: 2 NREVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENR 61 Query: 199 TVL 201 T L Sbjct: 62 TEL 64 >gi|270682533|ref|ZP_06222778.1| Recombination protein recR [Haemophilus influenzae HK1212] gi|270316297|gb|EFA28230.1| Recombination protein recR [Haemophilus influenzae HK1212] Length = 61 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 39/60 (65%) Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +I A + T+EG TA+YI + + ++K++R+A+GIP+G EL+ +D T+ + R + Sbjct: 1 MILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQI 60 >gi|167002257|ref|ZP_02268047.1| recombination protein RecR [Burkholderia mallei PRL-20] gi|243062074|gb|EES44260.1| recombination protein RecR [Burkholderia mallei PRL-20] Length = 59 Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 38/59 (64%) Query: 143 IFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 + A + T EG+ TAHY+ LK + +TRLA G+P+G EL+Y+D GTI A+ R L Sbjct: 1 MLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRTL 59 >gi|213422306|ref|ZP_03355372.1| recombination protein RecR [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 72 Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 45/70 (64%) Query: 132 ERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTI 191 +R+ +KI ELI A + T+EG+ TA+YI + V+ +R+A+G+P+G EL+ +D T+ Sbjct: 1 QRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELEMVDGTTL 60 Query: 192 FEAIRSRTVL 201 ++ R + Sbjct: 61 SHSLAGRHKI 70 >gi|308447539|ref|XP_003087455.1| hypothetical protein CRE_13870 [Caenorhabditis remanei] gi|308255670|gb|EFO99622.1| hypothetical protein CRE_13870 [Caenorhabditis remanei] Length = 427 Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++LI R+PG GP+SA+R H+++ + + LAE ++ + KV C +CG Sbjct: 1 MYDGIVQDLIDEFGRLPGIGPKSAQRIAFHILQTQNFDVSRLAELLSEVREKVRFCEVCG 60 Query: 65 NVDTTDPC 72 N+ C Sbjct: 61 NITEEVRC 68 >gi|255002972|ref|ZP_05277936.1| recombination protein RecR [Anaplasma marginale str. Puerto Rico] gi|255004100|ref|ZP_05278901.1| recombination protein RecR [Anaplasma marginale str. Virginia] Length = 67 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/60 (51%), Positives = 43/60 (71%) Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 ++ A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+ Sbjct: 7 VVVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 66 >gi|254994838|ref|ZP_05277028.1| recombination protein RecR [Anaplasma marginale str. Mississippi] Length = 65 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/60 (51%), Positives = 43/60 (71%) Query: 142 LIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 ++ A S ++GQ T HYI +KG D K+TRLA GIP+G E+DYLD+GT+ A+ SR V+ Sbjct: 5 VVVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDEGTLRAALSSRYVI 64 >gi|301629102|ref|XP_002943687.1| PREDICTED: hypothetical protein LOC100490174 [Xenopus (Silurana) tropicalis] Length = 1629 Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 24/48 (50%), Positives = 33/48 (68%) Query: 152 GQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 G+ TAH I + LK + +TRLA G+P+GSEL+Y+D GTI A+ R Sbjct: 1582 GEATAHAISETLKRRGLHVTRLARGVPVGSELEYVDLGTIAHALVDRR 1629 >gi|254360629|ref|ZP_04976778.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213] gi|153091169|gb|EDN73174.1| DNA recombination protein RecR [Mannheimia haemolytica PHL213] Length = 63 Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 T +ENL++ L +PG GP+SA+R HL+++ L++A+ + + C C Sbjct: 3 TSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALSKALNEAMSHIGHCKSCRT 62 Query: 66 V 66 Sbjct: 63 F 63 >gi|254291481|ref|ZP_04962272.1| recombination protein RecR [Vibrio cholerae AM-19226] gi|150422545|gb|EDN14501.1| recombination protein RecR [Vibrio cholerae AM-19226] Length = 53 Score = 83.0 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 32/52 (61%) Query: 150 IEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 +EG+ TA YI + + V +R+A+G+P+G EL+ +D T+ ++ R L Sbjct: 1 MEGEATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGRHKL 52 >gi|255022652|ref|ZP_05294638.1| recombination protein RecR [Listeria monocytogenes FSL J1-208] Length = 43 Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 26/39 (66%) Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 LK +K+TR+A+G+P+G +L+Y D+ T+ A+ R Sbjct: 4 LLKPSGIKVTRIAHGLPVGGDLEYADEVTLSXAMEGRRE 42 >gi|42560607|ref|NP_975058.1| DNA repair protein RecR [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492103|emb|CAE76700.1| DNA REPAIR PROTEIN RecR [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 122 Score = 78.0 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 53/118 (44%), Gaps = 1/118 (0%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 K+ + +I+ + G +++ R + L+ K++ L + + + C IC Sbjct: 3 KMLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LNQFIDQLNKTKQLISTCKIC 61 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 G + D C +C + R+ ++I +V + D +E + +YH+L G ++ + Sbjct: 62 GYLSENDKCLVCSLENRNQNIICIVSTILDAKNIENANKYKGVYHILNGEINLNKTLH 119 >gi|301320767|gb|ADK69410.1| recombination protein RecR [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 119 Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 52/117 (44%), Gaps = 1/117 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + + +I+ + G +++ R + L+ K++ L + + + C ICG Sbjct: 1 MLETTFDEIIESIRTNQGLTKKTSERLLVDLLINKDK-LNQFIDQLNKTKQLISTCKICG 59 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIG 121 + D C +C + R+ ++I +V + D +E + +YH+L G ++ + Sbjct: 60 YLSENDKCLVCSLENRNQNIICIVSTILDAKNIENANKYKGVYHILNGEINLNKTLH 116 >gi|19068176|gb|AAL58978.1| DNA repair and recombination protein [Mycoplasma gallisepticum] Length = 75 Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 42/68 (61%) Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFE 193 I+ +KI ++I A + T +GQTTA+Y+ L D+KI RL G+P S +DY D ++ Sbjct: 3 IKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYADSFSLKG 62 Query: 194 AIRSRTVL 201 A ++ ++ Sbjct: 63 AFENKQLI 70 >gi|330883532|gb|EGH17681.1| recombination protein RecR [Pseudomonas syringae pv. glycinea str. race 4] Length = 67 Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 I LI +PG G ++A+R L L+++ LA A+ + V C C Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGGSRLALALGQAMDGVGHCRSCRT 62 Query: 66 VDTT 69 + Sbjct: 63 LTEE 66 >gi|530446|emb|CAA83773.1| DNA repair protein RecM [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 107 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICG 64 + +++ + G +++ R ++L+ K++ L + + + C ICG Sbjct: 1 MPESIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDK-LDEFINQLNKVNQLISTCKICG 59 Query: 65 NVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG 112 + + C +C R+ + I +V + D +E + +YH+L G Sbjct: 60 YLSENNKCLVCSLDNRNQNTICIVSTILDAKNIENANKYKGVYHILNG 107 >gi|20502759|gb|AAM22613.1|AF399833_2 RecM [Streptococcus thermophilus] Length = 59 Score = 74.5 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 26/57 (45%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + I LI +++PG G ++A R + + ++ + A+ + ++ CS Sbjct: 2 LYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAAKRELTYCS 58 >gi|329898077|ref|ZP_08272287.1| hypothetical protein IMCC3088_285 [gamma proteobacterium IMCC3088] gi|328920976|gb|EGG28400.1| hypothetical protein IMCC3088_285 [gamma proteobacterium IMCC3088] Length = 41 Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 25/40 (62%) Query: 162 KLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 ++ V +RLA G+PMG ELDY+D T+ +A+ R L Sbjct: 1 MMRSKGVSASRLARGVPMGGELDYVDSSTLAQALSGRRPL 40 >gi|115378513|ref|ZP_01465670.1| recombination protein RecR [Stigmatella aurantiaca DW4/3-1] gi|115364482|gb|EAU63560.1| recombination protein RecR [Stigmatella aurantiaca DW4/3-1] Length = 39 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 19/31 (61%) Query: 5 ITGKEIENLIKILARIPGFGPRSARRATLHL 35 +T + L+ LA++PG G ++A+R H+ Sbjct: 1 MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHI 31 >gi|207110116|ref|ZP_03244278.1| recombination protein RecR [Helicobacter pylori HPKX_438_CA4C1] Length = 67 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDP 71 NL+ L +IP G +SA + HL + L + A+ N + CS C + ++ Sbjct: 6 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALSESEV 65 Query: 72 CA 73 C Sbjct: 66 CE 67 >gi|330976058|gb|EGH76124.1| recombination protein RecR [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 40 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLL 43 I LI +PG G ++A+R L L+++ Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSGG 40 >gi|330960248|gb|EGH60508.1| recombination protein RecR [Pseudomonas syringae pv. maculicola str. ES4326] Length = 39 Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQL 42 I LI +PG G ++A+R L L+++ Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQLLERDRSG 39 >gi|289678894|ref|ZP_06499784.1| recombination protein RecR [Pseudomonas syringae pv. syringae FF5] Length = 32 Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 14/30 (46%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHL 35 I LI +PG G ++A+R L L Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMALQL 32 >gi|257484838|ref|ZP_05638879.1| recombination protein RecR [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 31 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATL 33 I LI +PG G ++A+R L Sbjct: 3 FSPLIRQLIDAFRVLPGVGQKTAQRMAL 30 >gi|217077241|ref|YP_002334959.1| holliday junction DNA helicase RuvA [Thermosipho africanus TCF52B] gi|226725448|sp|B7IHQ4|RUVA_THEAB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|217037096|gb|ACJ75618.1| holliday junction DNA helicase RuvA [Thermosipho africanus TCF52B] Length = 189 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 I +K L+ +PG GP++A R L L + + L ++ Sbjct: 102 INEDVKALSSLPGIGPKTAERIVLEL----KDTIKELDVSINE 140 >gi|332978537|gb|EGK15246.1| crossover junction ATP-dependent DNA helicase RuvA [Psychrobacter sp. 1501(2011)] Length = 210 Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRA 31 M ++ E++ ++ L R+PG G ++A+R Sbjct: 89 MMSTMSAPELKQAVETDNDVALTRVPGIGKKTAQRL 124 >gi|282850099|ref|ZP_06259481.1| Holliday junction DNA helicase RuvA [Veillonella parvula ATCC 17745] gi|282580288|gb|EFB85689.1| Holliday junction DNA helicase RuvA [Veillonella parvula ATCC 17745] Length = 202 Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 +T + + I + L ++PG G +SA R L L Sbjct: 92 MTPEAFKLAIINGQVQQLTKLPGIGKKSAERLVLEL 127 >gi|269797654|ref|YP_003311554.1| Holliday junction DNA helicase RuvA [Veillonella parvula DSM 2008] gi|269094283|gb|ACZ24274.1| Holliday junction DNA helicase RuvA [Veillonella parvula DSM 2008] Length = 202 Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 +T + + I + L ++PG G +SA R L L Sbjct: 92 MTPEAFKLAIINGQVQQLTKLPGIGKKSAERLVLEL 127 >gi|270307810|ref|YP_003329868.1| Holliday junction DNA helicase [Dehalococcoides sp. VS] gi|270153702|gb|ACZ61540.1| Holliday junction DNA helicase [Dehalococcoides sp. VS] Length = 194 Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 M + + + + I ++L+ IPG G ++A R L L Sbjct: 89 MLSAMNAEALASAIISGNTELLSTIPGIGKKTASRIVLEL 128 >gi|313894615|ref|ZP_07828178.1| Holliday junction DNA helicase RuvA [Veillonella sp. oral taxon 158 str. F0412] gi|313440805|gb|EFR59234.1| Holliday junction DNA helicase RuvA [Veillonella sp. oral taxon 158 str. F0412] Length = 202 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L ++PG G +SA R L L Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127 >gi|303230216|ref|ZP_07316984.1| Holliday junction DNA helicase RuvA [Veillonella atypica ACS-134-V-Col7a] gi|302515142|gb|EFL57116.1| Holliday junction DNA helicase RuvA [Veillonella atypica ACS-134-V-Col7a] Length = 202 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L ++PG G +SA R L L Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127 >gi|303231814|ref|ZP_07318530.1| Holliday junction DNA helicase RuvA [Veillonella atypica ACS-049-V-Sch6] gi|302513521|gb|EFL55547.1| Holliday junction DNA helicase RuvA [Veillonella atypica ACS-049-V-Sch6] Length = 202 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L ++PG G +SA R L L Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127 >gi|238019731|ref|ZP_04600157.1| hypothetical protein VEIDISOL_01606 [Veillonella dispar ATCC 17748] gi|237863772|gb|EEP65062.1| hypothetical protein VEIDISOL_01606 [Veillonella dispar ATCC 17748] Length = 202 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L ++PG G +SA R L L Sbjct: 106 VQQLTKLPGIGKKSAERLVLEL 127 >gi|57234748|ref|YP_181186.1| Holliday junction DNA helicase RuvA [Dehalococcoides ethenogenes 195] gi|90134862|sp|Q3Z9B3|RUVA_DEHE1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|57225196|gb|AAW40253.1| Holliday junction DNA helicase RuvA [Dehalococcoides ethenogenes 195] Length = 194 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 M + + + + I ++L+ IPG G ++A R L L Sbjct: 89 MLSAMNAEALASAIISGNTELLSTIPGVGKKTASRIVLEL 128 >gi|313888460|ref|ZP_07822127.1| Holliday junction DNA helicase RuvA [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845489|gb|EFR32883.1| Holliday junction DNA helicase RuvA [Peptoniphilus harei ACS-146-V-Sch2b] Length = 194 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 K L ++PG G ++A+R L L + + LA + ++ + V + Sbjct: 107 KSLTKLPGIGKKTAQRIILEL----KDKVEKLALDLTSMTDDVEI 147 >gi|292670920|ref|ZP_06604346.1| crossover junction endoribonuclease subunit A [Selenomonas noxia ATCC 43541] gi|292647541|gb|EFF65513.1| crossover junction endoribonuclease subunit A [Selenomonas noxia ATCC 43541] Length = 200 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 IT E LI K + ++PG G ++A R L L Sbjct: 90 SAITANEFYRLIHQKDVKAITKLPGIGKKTAERIILEL 127 >gi|304407532|ref|ZP_07389184.1| Holliday junction DNA helicase RuvA [Paenibacillus curdlanolyticus YK9] gi|304343483|gb|EFM09325.1| Holliday junction DNA helicase RuvA [Paenibacillus curdlanolyticus YK9] Length = 210 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 + I I+ L ++PG G ++A+R L L K + PLA Sbjct: 93 PEAIVAAIQQENVTFLTKLPGIGKKTAQRMILDL--KDKLGNAPLA 136 >gi|320528952|ref|ZP_08030044.1| Holliday junction DNA helicase RuvA [Selenomonas artemidis F0399] gi|320138582|gb|EFW30472.1| Holliday junction DNA helicase RuvA [Selenomonas artemidis F0399] Length = 198 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 ++T + LI K + ++PG G ++A R L L Sbjct: 90 SEVTPHDFYRLIHKKDVKGITKLPGIGKKTAERLVLEL 127 >gi|313895598|ref|ZP_07829154.1| Holliday junction DNA helicase RuvA [Selenomonas sp. oral taxon 137 str. F0430] gi|312975724|gb|EFR41183.1| Holliday junction DNA helicase RuvA [Selenomonas sp. oral taxon 137 str. F0430] Length = 198 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 ++T + LI K + ++PG G ++A R L L Sbjct: 90 SEVTPHDFYRLIHKKNVKGITKLPGIGKKTAERLVLEL 127 >gi|261343863|ref|ZP_05971508.1| holliday junction DNA helicase RuvA [Providencia rustigianii DSM 4541] gi|282568250|gb|EFB73785.1| holliday junction DNA helicase RuvA [Providencia rustigianii DSM 4541] Length = 205 Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVSAIEQEAISSLVKLPGIGKKTAERLV 125 >gi|212711936|ref|ZP_03320064.1| hypothetical protein PROVALCAL_03011 [Providencia alcalifaciens DSM 30120] gi|212685458|gb|EEB44986.1| hypothetical protein PROVALCAL_03011 [Providencia alcalifaciens DSM 30120] Length = 205 Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVSAIEQEAISSLVKLPGIGKKTAERLV 125 >gi|183599000|ref|ZP_02960493.1| hypothetical protein PROSTU_02444 [Providencia stuartii ATCC 25827] gi|188021215|gb|EDU59255.1| hypothetical protein PROSTU_02444 [Providencia stuartii ATCC 25827] Length = 205 Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVSAIEQEAISSLVKLPGIGKKTAERLV 125 >gi|268589737|ref|ZP_06123958.1| holliday junction DNA helicase RuvA [Providencia rettgeri DSM 1131] gi|291314889|gb|EFE55342.1| holliday junction DNA helicase RuvA [Providencia rettgeri DSM 1131] Length = 205 Score = 42.9 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVSAIEQEAIASLVKLPGIGKKTAERLV 125 >gi|310643559|ref|YP_003948317.1| holliday junction ATP-dependent DNA helicase ruva [Paenibacillus polymyxa SC2] gi|309248509|gb|ADO58076.1| Holliday junction ATP-dependent DNA helicase ruvA [Paenibacillus polymyxa SC2] Length = 204 Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L ++PG G ++A+R L L Sbjct: 105 ITFLTKLPGIGKKTAQRMILDL 126 >gi|308070380|ref|YP_003871985.1| Holliday junction DNA helicase ruvA [Paenibacillus polymyxa E681] gi|305859659|gb|ADM71447.1| Holliday junction DNA helicase ruvA [Paenibacillus polymyxa E681] Length = 204 Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L ++PG G ++A+R L L Sbjct: 105 ITFLTKLPGIGKKTAQRMILDL 126 >gi|114566956|ref|YP_754110.1| Holliday junction resolvasome DNA-binding subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318040|sp|Q0AX15|RUVA_SYNWW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|114337891|gb|ABI68739.1| Holliday junction DNA helicase subunit RuvA [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 199 Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 15/98 (15%) Query: 15 KILARIPGFGPRSARRATLHL--------VKKKEQLLGPLAEAMANIYNKVCLCSICGNV 66 K L RIPG G ++A+R L + + E+ PL + + + Sbjct: 108 KTLVRIPGVGKKTAQRMIFELQDKVPELKLVEVEKEQRPLLDELMEALEILG-------Y 160 Query: 67 DTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVN 104 ++ +D R+ + +VE+ L +++ + Sbjct: 161 SRSEVLPAIMDLNRNKQLGNIVEENIKLVLKAKAQEMR 198 >gi|239618103|ref|YP_002941425.1| RuvA domain protein [Kosmotoga olearia TBF 19.5.1] gi|259495648|sp|C5CFS3|RUVA_KOSOT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|239506934|gb|ACR80421.1| RuvA domain protein [Kosmotoga olearia TBF 19.5.1] Length = 195 Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 1 MQKKI-TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 M +K+ K+ I L+R+PG G ++A R L + + ++++ Sbjct: 97 MLQKMIASKD----ISGLSRLPGLGKKTAERLVSELYDLVKDYAVEFPKELSDV 146 >gi|190575569|ref|YP_001973414.1| Holliday junction DNA helicase RuvA [Stenotrophomonas maltophilia K279a] gi|254522833|ref|ZP_05134888.1| Holliday junction DNA helicase RuvA [Stenotrophomonas sp. SKA14] gi|229560132|sp|B2FRN6|RUVA_STRMK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|190013491|emb|CAQ47126.1| putative Holliday junction DNA helicase [Stenotrophomonas maltophilia K279a] gi|219720424|gb|EED38949.1| Holliday junction DNA helicase RuvA [Stenotrophomonas sp. SKA14] Length = 197 Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R L L Sbjct: 107 ITALTRIPGIGKKTAERMVLEL 128 >gi|194366898|ref|YP_002029508.1| Holliday junction DNA helicase RuvA [Stenotrophomonas maltophilia R551-3] gi|229560131|sp|B4ST34|RUVA_STRM5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|194349702|gb|ACF52825.1| Holliday junction DNA helicase RuvA [Stenotrophomonas maltophilia R551-3] Length = 197 Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R L L Sbjct: 107 ITALTRIPGIGKKTAERMVLEL 128 >gi|218441378|ref|YP_002379707.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7424] gi|226725437|sp|B7K970|RUVA_CYAP7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|218174106|gb|ACK72839.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7424] Length = 209 Score = 42.5 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 IE LI L++ PG GP++A R L L Sbjct: 101 IEALINAIVTNDVKTLSKTPGVGPKTAERIALEL 134 >gi|313892063|ref|ZP_07825661.1| Holliday junction DNA helicase RuvA [Dialister microaerophilus UPII 345-E] gi|329120927|ref|ZP_08249559.1| crossover junction ATP-dependent DNA helicase RuvA [Dialister micraerophilus DSM 19965] gi|313119515|gb|EFR42709.1| Holliday junction DNA helicase RuvA [Dialister microaerophilus UPII 345-E] gi|327471386|gb|EGF16837.1| crossover junction ATP-dependent DNA helicase RuvA [Dialister micraerophilus DSM 19965] Length = 200 Score = 42.5 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I +L ++PG G ++A R L L Sbjct: 106 ISVLTKLPGIGKKTAERLVLEL 127 >gi|251798377|ref|YP_003013108.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. JDR-2] gi|247546003|gb|ACT03022.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. JDR-2] Length = 212 Score = 42.5 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L R+PG G ++A+R L L Sbjct: 105 IAFLTRLPGIGKKTAQRMILDL 126 >gi|206889338|ref|YP_002248715.1| holliday junction DNA helicase RuvA [Thermodesulfovibrio yellowstonii DSM 11347] gi|226698744|sp|B5YKF0|RUVA_THEYD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|206741276|gb|ACI20333.1| holliday junction DNA helicase RuvA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 190 Score = 42.5 bits (99), Expect = 0.032, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L++IPG G ++A+R L L Sbjct: 106 IKSLSKIPGIGKKTAQRILLEL 127 >gi|253574942|ref|ZP_04852282.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. oral taxon 786 str. D14] gi|251845988|gb|EES73996.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. oral taxon 786 str. D14] Length = 206 Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L ++PG G ++A+R L L Sbjct: 106 VSFLTKLPGIGKKTAQRMILDL 127 >gi|188586412|ref|YP_001917957.1| Holliday junction DNA helicase RuvA [Natranaerobius thermophilus JW/NM-WN-LF] gi|229560108|sp|B2A5L5|RUVA_NATTJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|179351099|gb|ACB85369.1| Holliday junction DNA helicase RuvA [Natranaerobius thermophilus JW/NM-WN-LF] Length = 214 Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 17/34 (50%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHL 35 + + + + L ++PG G +SA+R L L Sbjct: 95 PTEFYLSVLNDQVNQLTKVPGIGKKSAQRIILEL 128 >gi|253989949|ref|YP_003041305.1| Holliday junction DNA helicase RuvA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639070|emb|CAR67683.1| holliday junction atp-dependent dna helicase ruva (ec 3.6.1.-) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781399|emb|CAQ84562.1| holliday junction ATP-dependent DNA helicase RuvA [Photorhabdus asymbiotica] Length = 205 Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVSAIEQEAIASLVKLPGVGKKTAERLV 125 >gi|320093778|ref|ZP_08025625.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp. oral taxon 178 str. F0338] gi|319979279|gb|EFW10775.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp. oral taxon 178 str. F0338] Length = 199 Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 14 IKILARIPGFGPRSARRATL 33 I L +IPG G +SA+R L Sbjct: 106 IATLQKIPGVGRKSAQRMAL 125 >gi|149194599|ref|ZP_01871695.1| Holliday junction DNA helicase motor protein [Caminibacter mediatlanticus TB-2] gi|149135343|gb|EDM23823.1| Holliday junction DNA helicase motor protein [Caminibacter mediatlanticus TB-2] Length = 180 Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 I L ++PG GP+SA+R L++ + + + ++ Sbjct: 103 INSLKKVPGIGPKSAKRI---LMEMGDFEIENINPIISQA 139 >gi|329926780|ref|ZP_08281188.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. HGF5] gi|328938980|gb|EGG35348.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. HGF5] Length = 205 Score = 42.2 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHL 35 I + I LI ++PG G ++A+R L L Sbjct: 98 SAIYQENISFLI----KLPGIGKKTAQRMILDL 126 >gi|261405408|ref|YP_003241649.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. Y412MC10] gi|261281871|gb|ACX63842.1| Holliday junction DNA helicase RuvA [Paenibacillus sp. Y412MC10] Length = 205 Score = 42.2 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRATLHL 35 I + I LI ++PG G ++A+R L L Sbjct: 98 SAIYQENISFLI----KLPGIGKKTAQRMILDL 126 >gi|291545898|emb|CBL19006.1| Holliday junction resolvasome, DNA-binding subunit [Ruminococcus sp. SR1/5] Length = 134 Score = 42.2 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNKVC 58 +K +++ PG G ++A++ L L +K ++ LA Sbjct: 37 VKTISKAPGIGKKTAQKMILELKDKLKLEDAFEMKLAHQQEEAAEGAS 84 >gi|303258188|ref|ZP_07344195.1| holliday junction DNA helicase RuvA [Burkholderiales bacterium 1_1_47] gi|302858941|gb|EFL82025.1| holliday junction DNA helicase RuvA [Burkholderiales bacterium 1_1_47] Length = 189 Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ ++I N I +L +PG G ++A R L L Sbjct: 89 MLSSMSAEDIGNAIANNEIGLLTMVPGIGKKTAERLVLEL 128 >gi|332977850|gb|EGK14603.1| crossover junction ATP-dependent DNA helicase RuvA [Desmospora sp. 8437] Length = 204 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG G ++A+R L L Sbjct: 107 LTKLPGVGKKTAQRIVLDL 125 >gi|331000258|ref|ZP_08323942.1| Holliday junction DNA helicase RuvA [Parasutterella excrementihominis YIT 11859] gi|329572424|gb|EGG54077.1| Holliday junction DNA helicase RuvA [Parasutterella excrementihominis YIT 11859] Length = 189 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ ++I N I +L +PG G ++A R L L Sbjct: 89 MLSSMSAEDIGNAIANNEIGLLTMVPGIGKKTAERLVLEL 128 >gi|300741595|ref|ZP_07071616.1| holliday junction DNA helicase RuvA [Rothia dentocariosa M567] gi|300380780|gb|EFJ77342.1| holliday junction DNA helicase RuvA [Rothia dentocariosa M567] Length = 206 Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 15 KILARIPGFGPRSARRATLHL 35 K ++PG GP+SARR L L Sbjct: 107 KAFTKVPGIGPKSARRIVLEL 127 >gi|311113689|ref|YP_003984911.1| crossover junction ATP-dependent DNA helicase RuvA [Rothia dentocariosa ATCC 17931] gi|310945183|gb|ADP41477.1| crossover junction ATP-dependent DNA helicase RuvA [Rothia dentocariosa ATCC 17931] Length = 206 Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 15 KILARIPGFGPRSARRATLHL 35 K ++PG GP+SARR L L Sbjct: 107 KAFTKVPGIGPKSARRIVLEL 127 >gi|290475277|ref|YP_003468165.1| Holliday junction helicase subunit A [Xenorhabdus bovienii SS-2004] gi|289174598|emb|CBJ81392.1| Holliday junction helicase, subunit A [Xenorhabdus bovienii SS-2004] Length = 205 Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVTAIEQEAITSLVKLPGVGKKTAERLV 125 >gi|300723091|ref|YP_003712389.1| Holliday junction helicase subunit A [Xenorhabdus nematophila ATCC 19061] gi|297629606|emb|CBJ90209.1| Holliday junction helicase, subunit A [Xenorhabdus nematophila ATCC 19061] Length = 205 Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVTAIEQEAIASLVKLPGVGKKTAERLV 125 >gi|293192652|ref|ZP_06609606.1| holliday junction DNA helicase RuvA [Actinomyces odontolyticus F0309] gi|292820159|gb|EFF79156.1| holliday junction DNA helicase RuvA [Actinomyces odontolyticus F0309] Length = 207 Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 16 ILARIPGFGPRSARRATLHL 35 L RIPG G +SA+R L + Sbjct: 114 ALQRIPGVGKKSAQRMALEI 133 >gi|312897339|ref|ZP_07756765.1| Holliday junction DNA helicase RuvA [Megasphaera micronuciformis F0359] gi|310621557|gb|EFQ05091.1| Holliday junction DNA helicase RuvA [Megasphaera micronuciformis F0359] Length = 199 Score = 41.8 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I +L ++PG G ++A R L L Sbjct: 106 IGLLTKMPGIGKKTAERIVLEL 127 >gi|225410073|ref|ZP_03761262.1| hypothetical protein CLOSTASPAR_05294 [Clostridium asparagiforme DSM 15981] gi|225042421|gb|EEG52667.1| hypothetical protein CLOSTASPAR_05294 [Clostridium asparagiforme DSM 15981] Length = 207 Score = 41.8 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 7/52 (13%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMA 51 +T ++ I K ++R PG GP++A+R L L K + + + +A Sbjct: 93 MTPDDLRMAIVTGDAKAISRAPGIGPKTAQRLILDL--KDKISMEEMLGNLA 142 >gi|150020803|ref|YP_001306157.1| Holliday junction DNA helicase RuvA [Thermosipho melanesiensis BI429] gi|166231454|sp|A6LLH1|RUVA_THEM4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|149793324|gb|ABR30772.1| Holliday junction DNA helicase RuvA [Thermosipho melanesiensis BI429] Length = 189 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L+ +PG GP++A R L L Sbjct: 106 VKTLSTLPGIGPKTAERIILEL 127 >gi|326799497|ref|YP_004317316.1| Holliday junction ATP-dependent DNA helicase ruvA [Sphingobacterium sp. 21] gi|326550261|gb|ADZ78646.1| Holliday junction ATP-dependent DNA helicase ruvA [Sphingobacterium sp. 21] Length = 194 Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKK-KEQLLGPLA 47 IT EI+ I K + RI G GP+SA+R L L K K++ L Sbjct: 90 SSITPTEIQTAIVQGDVKQIQRIKGIGPKSAQRIILELQDKLKKEGADTLI 140 >gi|37526027|ref|NP_929371.1| Holliday junction DNA helicase motor protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|44888380|sp|Q7N548|RUVA_PHOLL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|36785457|emb|CAE14404.1| Holliday junction DNA helicase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 205 Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIEN-LIKILARIPGFGPRSARRAT 32 M + IE I L ++PG G ++A R Sbjct: 93 MSAQQFVSAIEREAIVSLVKLPGVGKKTAERLV 125 >gi|148653226|ref|YP_001280319.1| Holliday junction DNA helicase RuvA [Psychrobacter sp. PRwf-1] gi|172048524|sp|A5WFC8|RUVA_PSYWF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|148572310|gb|ABQ94369.1| Holliday junction DNA helicase subunit RuvA [Psychrobacter sp. PRwf-1] Length = 210 Score = 41.8 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYN 55 M + E+++ I L R+PG G ++A+R + L K K + + + Sbjct: 89 MMSTFSATELKHCIDTENDAALTRVPGIGKKTAQRLLIEL-KGKFDHIQSDMSLLTEVEQ 147 Query: 56 KVCL 59 ++ + Sbjct: 148 QIGI 151 >gi|256832601|ref|YP_003161328.1| Holliday junction DNA helicase RuvA [Jonesia denitrificans DSM 20603] gi|256686132|gb|ACV09025.1| Holliday junction DNA helicase RuvA [Jonesia denitrificans DSM 20603] Length = 205 Score = 41.8 bits (97), Expect = 0.059, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 14 IKILARIPGFGPRSARRATLHLVKK 38 IK L ++PG GP+ A+R L L + Sbjct: 106 IKALTKVPGIGPKVAQRIVLELSNR 130 >gi|307545151|ref|YP_003897630.1| Holliday junction DNA helicase motor protein [Halomonas elongata DSM 2581] gi|307217175|emb|CBV42445.1| Holliday junction DNA helicase motor protein [Halomonas elongata DSM 2581] Length = 203 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 14 IKILARIPGFGPRSARRAT 32 IK L R+PG G ++A R Sbjct: 107 IKALTRLPGVGKKTAERLV 125 >gi|92113970|ref|YP_573898.1| Holliday junction DNA helicase subunit RuvA [Chromohalobacter salexigens DSM 3043] gi|91797060|gb|ABE59199.1| Holliday junction DNA helicase subunit RuvA [Chromohalobacter salexigens DSM 3043] Length = 206 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 14 IKILARIPGFGPRSARRAT 32 IK L R+PG G ++A R Sbjct: 109 IKALTRLPGVGKKTAERLV 127 >gi|157364836|ref|YP_001471603.1| RuvA domain-containing protein [Thermotoga lettingae TMO] gi|157315440|gb|ABV34539.1| RuvA domain protein [Thermotoga lettingae TMO] Length = 186 Score = 41.8 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 7 GKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57 +E+ +LI + L+R PG G ++A R L ++ ++ ++ +++ + + Sbjct: 92 PEELVHLIISQDVEKLSRFPGIGKKTAERLIAELKDEEFEIKSDYSKELSDAIDAL 147 >gi|255066950|ref|ZP_05318805.1| holliday junction DNA helicase RuvA [Neisseria sicca ATCC 29256] gi|255048775|gb|EET44239.1| holliday junction DNA helicase RuvA [Neisseria sicca ATCC 29256] Length = 194 Score = 41.4 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 ++ E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMSADELARAVADEDIKRLSSAPGIGKKTAERMVLEL 128 >gi|261365694|ref|ZP_05978577.1| holliday junction DNA helicase RuvA [Neisseria mucosa ATCC 25996] gi|288565789|gb|EFC87349.1| holliday junction DNA helicase RuvA [Neisseria mucosa ATCC 25996] Length = 194 Score = 41.4 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 ++ E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMSADELARAVADEDIKRLSSAPGIGKKTAERMVLEL 128 >gi|257063440|ref|YP_003143112.1| Holliday junction DNA helicase, RuvA subunit [Slackia heliotrinireducens DSM 20476] gi|256791093|gb|ACV21763.1| Holliday junction DNA helicase, RuvA subunit [Slackia heliotrinireducens DSM 20476] Length = 197 Score = 41.4 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 +E+ N I K ++ IPG G ++A+R L L Sbjct: 93 YKPEELANAIAAGDVKAVSMIPGVGKKTAQRMILEL 128 >gi|323142288|ref|ZP_08077120.1| Holliday junction DNA helicase RuvA [Phascolarctobacterium sp. YIT 12067] gi|322413172|gb|EFY04059.1| Holliday junction DNA helicase RuvA [Phascolarctobacterium sp. YIT 12067] Length = 200 Score = 41.4 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK+L ++PG G ++A R L L Sbjct: 107 IKVLTKLPGIGKKTAERLLLEL 128 >gi|51892298|ref|YP_074989.1| Holliday junction DNA helicase RuvA [Symbiobacterium thermophilum IAM 14863] gi|81389173|sp|Q67Q98|RUVA_SYMTH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|51855987|dbj|BAD40145.1| Holliday junction DNA helicase RuvA [Symbiobacterium thermophilum IAM 14863] Length = 205 Score = 41.4 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 9 EIENLIKILARIPGFGPRSARRATLHL 35 E+L + R+PG G ++A+R L L Sbjct: 103 AFEDL-DAICRVPGIGRKTAQRLVLEL 128 >gi|153810824|ref|ZP_01963492.1| hypothetical protein RUMOBE_01208 [Ruminococcus obeum ATCC 29174] gi|149833220|gb|EDM88302.1| hypothetical protein RUMOBE_01208 [Ruminococcus obeum ATCC 29174] Length = 203 Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANI 53 IK +++ PG G ++A++ L L +K ++ LA Sbjct: 107 IKTISKAPGIGKKTAQKLILELKDKLKLEDAFEKKLAHEQEAA 149 >gi|224372976|ref|YP_002607348.1| holliday junction DNA helicase RuvA [Nautilia profundicola AmH] gi|254767379|sp|B9L9P0|RUVA_NAUPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|223589102|gb|ACM92838.1| holliday junction DNA helicase RuvA [Nautilia profundicola AmH] Length = 184 Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLL 43 I L +IPG GP+SA+R L++ E + Sbjct: 104 INALKKIPGIGPKSAKRI---LMEMGEFEV 130 >gi|114776334|ref|ZP_01451379.1| putative Holliday junction DNA helicase RuvA [Mariprofundus ferrooxydans PV-1] gi|114553164|gb|EAU55562.1| putative Holliday junction DNA helicase RuvA [Mariprofundus ferrooxydans PV-1] Length = 188 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKIL--------ARIPGFGPRSARRATLHL 35 + G IE LI + AR PG G ++A+R L L Sbjct: 90 MGGMSIEELIGAIEHADDLAIARTPGIGKKTAQRLILEL 128 >gi|226942024|ref|YP_002797098.1| RuvA [Laribacter hongkongensis HLHK9] gi|254766965|sp|C1D5S2|RUVA_LARHH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226716951|gb|ACO76089.1| RuvA [Laribacter hongkongensis HLHK9] Length = 202 Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L+R+PG G ++A R L L Sbjct: 107 IKTLSRVPGIGKKTAERLILEL 128 >gi|315604284|ref|ZP_07879350.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp. oral taxon 180 str. F0310] gi|315313990|gb|EFU62041.1| crossover junction ATP-dependent DNA helicase RuvA [Actinomyces sp. oral taxon 180 str. F0310] Length = 201 Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 17 LARIPGFGPRSARRATLHL 35 L RIPG G +SA+R L + Sbjct: 109 LQRIPGVGKKSAQRMALEI 127 >gi|154508894|ref|ZP_02044536.1| hypothetical protein ACTODO_01405 [Actinomyces odontolyticus ATCC 17982] gi|153798528|gb|EDN80948.1| hypothetical protein ACTODO_01405 [Actinomyces odontolyticus ATCC 17982] Length = 207 Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 17 LARIPGFGPRSARRATLHL 35 L RIPG G +SA+R L + Sbjct: 115 LQRIPGVGKKSAQRMALEI 133 >gi|159899035|ref|YP_001545282.1| Holliday junction DNA helicase RuvA [Herpetosiphon aurantiacus ATCC 23779] gi|229560066|sp|A9AZL0|RUVA_HERA2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|159892074|gb|ABX05154.1| Holliday junction DNA helicase RuvA [Herpetosiphon aurantiacus ATCC 23779] Length = 197 Score = 41.0 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 5/35 (14%) Query: 6 TGKEIENLI-----KILARIPGFGPRSARRATLHL 35 T +E+++ I +L+++PG G ++A R L L Sbjct: 94 TPEELQHAIAREDITMLSKVPGIGKKTAARLVLEL 128 >gi|300112852|ref|YP_003759427.1| Holliday junction DNA helicase RuvA [Nitrosococcus watsonii C-113] gi|299538789|gb|ADJ27106.1| Holliday junction DNA helicase RuvA [Nitrosococcus watsonii C-113] Length = 202 Score = 41.0 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 9/48 (18%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSIC 63 L R+PG G ++A R +++ +++LL +A + CS Sbjct: 109 SLTRLPGIGKKTAERL---IIEMRDRLLDRPESRIAEM------CSDT 147 >gi|297183449|gb|ADI19581.1| holliday junction resolvasome, DNA-binding subunit [uncultured Acidobacteria bacterium HF0770_27F21] Length = 192 Score = 41.0 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 8/56 (14%) Query: 14 IKILARIPGFGPRSARRATLHL--------VKKKEQLLGPLAEAMANIYNKVCLCS 61 I L+ IPG G ++A R L L + + + + + + + Sbjct: 107 IVRLSTIPGVGKKTAERMALELKEKVDDLGLVSSDSGPRGIRQDVLSALENLGYRP 162 >gi|226945719|ref|YP_002800792.1| Holliday junction DNA helicase RuvA [Azotobacter vinelandii DJ] gi|226720646|gb|ACO79817.1| holliday junction DNA helicase RuvA [Azotobacter vinelandii DJ] Length = 204 Score = 41.0 bits (95), Expect = 0.088, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 11/44 (25%) Query: 5 ITGKEIENL--------IKILARIPGFGPRSARRATLHLVKKKE 40 ++ E++ L IK L R+PG G ++A R L++ K+ Sbjct: 93 MSSLELDELVRCVQAGDIKALTRVPGVGKKTAERL---LIELKD 133 >gi|295109923|emb|CBL23876.1| Holliday junction DNA helicase subunit RuvA [Ruminococcus obeum A2-162] Length = 203 Score = 41.0 bits (95), Expect = 0.089, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANI 53 IK ++R PG G ++A++ L L +K ++ LA Sbjct: 107 IKTISRAPGIGKKTAQKLILELKDKLKLEDAFEKKLAHEQEAA 149 >gi|117923791|ref|YP_864408.1| Holliday junction DNA helicase RuvA [Magnetococcus sp. MC-1] gi|166230563|sp|A0L4V9|RUVA_MAGSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|117607547|gb|ABK43002.1| Holliday junction DNA helicase subunit RuvA [Magnetococcus sp. MC-1] Length = 204 Score = 41.0 bits (95), Expect = 0.095, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 E+L +L IPG G ++A+R + L K + P+A Sbjct: 105 EDLT-LLCTIPGVGKKTAQRMAMEL--KDKLGALPMA 138 >gi|39996178|ref|NP_952129.1| Holliday junction DNA helicase RuvA [Geobacter sulfurreducens PCA] gi|81702836|sp|Q74E87|RUVA_GEOSL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|39982943|gb|AAR34402.1| Holliday junction DNA helicase RuvA [Geobacter sulfurreducens PCA] gi|298505192|gb|ADI83915.1| Holliday junction DNA helicase RuvA [Geobacter sulfurreducens KN400] Length = 199 Score = 41.0 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 I +E+ I L+ IPG G ++A R L L Sbjct: 91 SNIQPEELAAAIVQGNLVRLSSIPGIGKKTAERLVLEL 128 >gi|221632653|ref|YP_002521874.1| Holliday junction DNA helicase RuvA [Thermomicrobium roseum DSM 5159] gi|254767395|sp|B9KYT2|RUVA_THERP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|221156321|gb|ACM05448.1| Holliday junction DNA helicase RuvA [Thermomicrobium roseum DSM 5159] Length = 191 Score = 41.0 bits (95), Expect = 0.100, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I+ LAR PG G ++A R L L Sbjct: 107 IEELARAPGIGKKTASRIVLEL 128 >gi|308048622|ref|YP_003912188.1| DNA-directed DNA polymerase [Ferrimonas balearica DSM 9799] gi|307630812|gb|ADN75114.1| DNA-directed DNA polymerase [Ferrimonas balearica DSM 9799] Length = 356 Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 14/21 (66%) Query: 17 LARIPGFGPRSARRATLHLVK 37 L +IPG GP++A R H ++ Sbjct: 184 LRKIPGVGPKTAERLASHGLQ 204 >gi|315645785|ref|ZP_07898906.1| Holliday junction DNA helicase RuvA [Paenibacillus vortex V453] gi|315278546|gb|EFU41860.1| Holliday junction DNA helicase RuvA [Paenibacillus vortex V453] Length = 178 Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L ++PG G ++A+R L L Sbjct: 78 VSFLVKLPGIGKKTAQRMILDL 99 >gi|94677012|ref|YP_588762.1| Holliday junction DNA helicase RuvA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123081488|sp|Q1LTF2|RUVA_BAUCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|94220162|gb|ABF14321.1| Holliday junction DNA helicase RuvA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 196 Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Query: 1 MQKKITGKEIE-NLIKILARIPGFGPRSARRATLHLVKKKEQL 42 M +K IE N I +L ++PG G ++A R ++ K++L Sbjct: 93 MSEKQFLSAIEHNEIHMLTKLPGVGKKTAERLV---IEMKDKL 132 >gi|312892324|ref|ZP_07751819.1| Holliday junction DNA helicase subunit RuvA [Mucilaginibacter paludis DSM 18603] gi|311295108|gb|EFQ72282.1| Holliday junction DNA helicase subunit RuvA [Mucilaginibacter paludis DSM 18603] Length = 194 Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 IT EI+N I ++ RI G GP+SA+R L L Sbjct: 90 SSITPAEIQNAIIKGDVPLIQRIKGIGPKSAQRIVLEL 127 >gi|227825064|ref|ZP_03989896.1| holliday junction DNA helicase ruvA [Acidaminococcus sp. D21] gi|226905563|gb|EEH91481.1| holliday junction DNA helicase ruvA [Acidaminococcus sp. D21] Length = 201 Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L ++PG G ++A R L L Sbjct: 106 VKFLTKLPGIGKKTAERMLLEL 127 >gi|289209177|ref|YP_003461243.1| Holliday junction DNA helicase RuvA [Thioalkalivibrio sp. K90mix] gi|288944808|gb|ADC72507.1| Holliday junction DNA helicase RuvA [Thioalkalivibrio sp. K90mix] Length = 201 Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 M G E+ LI LA++PG G R+A R L L Sbjct: 89 MLSTYAGDELAGLISGGDVTGLAKVPGIGKRTAERVVLEL 128 >gi|284007614|emb|CBA73228.1| Holliday junction ATP-dependent DNA helicase [Arsenophonus nasoniae] Length = 204 Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 11 ENLIKILARIPGFGPRSARRAT 32 + I L ++PG G ++A R Sbjct: 104 QEAIASLVKLPGVGKKTAERLV 125 >gi|94264074|ref|ZP_01287873.1| DNA recombination protein, RuvA:Helix-hairpin-helix motif [delta proteobacterium MLMS-1] gi|93455490|gb|EAT05680.1| DNA recombination protein, RuvA:Helix-hairpin-helix motif [delta proteobacterium MLMS-1] Length = 212 Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L ++PG G ++A R L L Sbjct: 107 IAGLKKLPGVGKKTAERLCLEL 128 >gi|219669644|ref|YP_002460079.1| Holliday junction DNA helicase RuvA [Desulfitobacterium hafniense DCB-2] gi|219539904|gb|ACL21643.1| Holliday junction DNA helicase RuvA [Desulfitobacterium hafniense DCB-2] Length = 198 Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I +L ++PG G ++A+R L L Sbjct: 103 ITLLTKVPGIGKKTAQRLILEL 124 >gi|285808235|gb|ADC35769.1| Holliday junction DNA helicase RuvA [uncultured bacterium 293] Length = 198 Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKILA--------RIPGFGPRSARRATLHL 35 ++G E + LI+ L RIPG G ++A R L L Sbjct: 90 LSGIETDELIQALRGGDLARLTRIPGVGRKTAERLVLEL 128 >gi|54294187|ref|YP_126602.1| holliday junction DNA helicase [Legionella pneumophila str. Lens] gi|54297206|ref|YP_123575.1| Holliday junction DNA helicase RuvA [Legionella pneumophila str. Paris] gi|148358830|ref|YP_001250037.1| Holliday junction DNA helicase RuvA [Legionella pneumophila str. Corby] gi|296106875|ref|YP_003618575.1| holliday junction DNA helicase RuvA [Legionella pneumophila 2300/99 Alcoy] gi|81368758|sp|Q5WX47|RUVA_LEGPL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|81370703|sp|Q5X5R9|RUVA_LEGPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230562|sp|A5IBE1|RUVA_LEGPC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|53750991|emb|CAH12402.1| holliday junction DNA helicase [Legionella pneumophila str. Paris] gi|53754019|emb|CAH15490.1| holliday junction DNA helicase [Legionella pneumophila str. Lens] gi|148280603|gb|ABQ54691.1| Holliday junction DNA helicase RuvA [Legionella pneumophila str. Corby] gi|295648776|gb|ADG24623.1| holliday junction DNA helicase RuvA [Legionella pneumophila 2300/99 Alcoy] gi|307610000|emb|CBW99532.1| holliday junction DNA helicase [Legionella pneumophila 130b] Length = 199 Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRAT 32 I+ KE I L ++PG G ++A R Sbjct: 92 SSISPKEFIQCIHQENAALLTKLPGIGKKTAERLV 126 >gi|52841519|ref|YP_095318.1| Holliday junction DNA helicase RuvA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81377601|sp|Q5ZW00|RUVA_LEGPH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|52628630|gb|AAU27371.1| Holliday junction DNA helicase RuvA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 199 Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRAT 32 I+ KE I L ++PG G ++A R Sbjct: 92 SSISPKEFIQCIHQENAALLTKLPGIGKKTAERLV 126 >gi|93005514|ref|YP_579951.1| Holliday junction DNA helicase RuvA [Psychrobacter cryohalolentis K5] gi|123386742|sp|Q1QCY6|RUVA_PSYCK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|92393192|gb|ABE74467.1| Holliday junction DNA helicase subunit RuvA [Psychrobacter cryohalolentis K5] Length = 207 Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 8/47 (17%) Query: 1 MQKKITGKEI-----ENLIKILARIPGFGPRSARRATLHLVKKKEQL 42 M ++ E+ ++ L RIPG G ++A+R L++ K++L Sbjct: 89 MLSAMSAAELKMHVEQDSEDALTRIPGIGKKTAQRL---LIELKDKL 132 >gi|121535579|ref|ZP_01667386.1| Holliday junction DNA helicase RuvA [Thermosinus carboxydivorans Nor1] gi|121305819|gb|EAX46754.1| Holliday junction DNA helicase RuvA [Thermosinus carboxydivorans Nor1] Length = 201 Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + +L +IPG G ++A R L L Sbjct: 106 VSLLTKIPGIGKKTAERIILEL 127 >gi|89895213|ref|YP_518700.1| hypothetical protein DSY2467 [Desulfitobacterium hafniense Y51] gi|122997255|sp|Q24UN6|RUVA_DESHY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|89334661|dbj|BAE84256.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 201 Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I +L ++PG G ++A+R L L Sbjct: 106 ITLLTKVPGIGKKTAQRLILEL 127 >gi|258514397|ref|YP_003190619.1| Holliday junction DNA helicase RuvA [Desulfotomaculum acetoxidans DSM 771] gi|257778102|gb|ACV61996.1| Holliday junction DNA helicase RuvA [Desulfotomaculum acetoxidans DSM 771] Length = 203 Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 19/32 (59%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGP 45 IK + ++PG G ++A+R L L K + + P Sbjct: 107 IKAVMKVPGIGKKTAQRLILELKDKLKGRVQP 138 >gi|145300090|ref|YP_001142931.1| DNA polymerase IV [Aeromonas salmonicida subsp. salmonicida A449] gi|142852862|gb|ABO91183.1| DNA polymerase IV [Aeromonas salmonicida subsp. salmonicida A449] Length = 361 Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Query: 7 GKEIENLIKIL--ARIPGFGPRSARRA 31 +E++ ++ L A++PG G ++A R Sbjct: 177 PEEVDEFVRQLPLAKLPGIGRKTAERL 203 >gi|297616928|ref|YP_003702087.1| Holliday junction DNA helicase RuvA [Syntrophothermus lipocalidus DSM 12680] gi|297144765|gb|ADI01522.1| Holliday junction DNA helicase RuvA [Syntrophothermus lipocalidus DSM 12680] Length = 201 Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 +T +E+ + K L +PG G ++A+R L Sbjct: 91 SSMTTEELYRAVLAQDEKSLTSVPGIGRKTAQRLIFEL 128 >gi|291286413|ref|YP_003503229.1| Holliday junction DNA helicase RuvA [Denitrovibrio acetiphilus DSM 12809] gi|290883573|gb|ADD67273.1| Holliday junction DNA helicase RuvA [Denitrovibrio acetiphilus DSM 12809] Length = 192 Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHL 35 M + + I +++ IPG G ++A R + L Sbjct: 99 MNAVMNSE-----IGLISTIPGIGKKTAERIVVEL 128 >gi|304440231|ref|ZP_07400121.1| crossover junction ATP-dependent DNA helicase RuvA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371280|gb|EFM24896.1| crossover junction ATP-dependent DNA helicase RuvA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 193 Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57 +K L + PG G ++A R +++ K++++ + + ++ V Sbjct: 106 VKSLTKAPGVGKKTAERI---ILELKDRIVKIFGDFIPDVKESV 146 >gi|163846991|ref|YP_001635035.1| Holliday junction DNA helicase RuvA [Chloroflexus aurantiacus J-10-fl] gi|222524813|ref|YP_002569284.1| Holliday junction DNA helicase RuvA [Chloroflexus sp. Y-400-fl] gi|189045746|sp|A9WA87|RUVA_CHLAA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254766952|sp|B9LCT8|RUVA_CHLSY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|163668280|gb|ABY34646.1| Holliday junction DNA helicase RuvA [Chloroflexus aurantiacus J-10-fl] gi|222448692|gb|ACM52958.1| Holliday junction DNA helicase RuvA [Chloroflexus sp. Y-400-fl] Length = 195 Score = 40.2 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I LAR+PG G ++A R L L Sbjct: 107 IARLARVPGIGKKTAERIVLEL 128 >gi|34499678|ref|NP_903893.1| Holliday junction DNA helicase RuvA [Chromobacterium violaceum ATCC 12472] gi|44888390|sp|Q7NQB7|RUVA_CHRVO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|34105529|gb|AAQ61883.1| holliday junction DNA helicase [Chromobacterium violaceum ATCC 12472] Length = 197 Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L+ +PG G ++A R L L Sbjct: 107 IKRLSAVPGIGKKTAERLVLEL 128 >gi|326795234|ref|YP_004313054.1| Holliday junction ATP-dependent DNA helicase ruvA [Marinomonas mediterranea MMB-1] gi|326545998|gb|ADZ91218.1| Holliday junction ATP-dependent DNA helicase ruvA [Marinomonas mediterranea MMB-1] Length = 199 Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Query: 6 TGKEIENL----IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 T + IEN+ + L +IPG G ++A R +++ +++L + + Sbjct: 95 TSELIENVQESNVDALVKIPGVGKKTAERL---IIELRDKLGQAAKQDL 140 >gi|73748284|ref|YP_307523.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. CBDB1] gi|289432333|ref|YP_003462206.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. GT] gi|90134867|sp|Q3ZZK6|RUVA_DEHSC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|73660000|emb|CAI82607.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. CBDB1] gi|288946053|gb|ADC73750.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. GT] Length = 194 Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPL-AEAMANI 53 M + + + + I ++L+ IPG G +++ R +++ K+++ A ++ + Sbjct: 89 MLSVMNAEALASAIISGNAELLSTIPGIGKKTSSRI---ILELKDKIAKNWEAGVLSQV 144 >gi|147669064|ref|YP_001213882.1| Holliday junction DNA helicase RuvA [Dehalococcoides sp. BAV1] gi|146270012|gb|ABQ17004.1| Holliday junction DNA helicase subunit RuvA [Dehalococcoides sp. BAV1] Length = 194 Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPL-AEAMANI 53 M + + + + I ++L+ IPG G +++ R +++ K+++ A ++ + Sbjct: 89 MLSVMNAEALASAIISGNAELLSTIPGIGKKTSSRI---ILELKDKIAKNWEAGVLSQV 144 >gi|90408541|ref|ZP_01216698.1| holliday junction DNA helicase RuvA [Psychromonas sp. CNPT3] gi|90310360|gb|EAS38488.1| holliday junction DNA helicase RuvA [Psychromonas sp. CNPT3] Length = 207 Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 11 ENLIKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 104 NEAVSQLVKLPGVGKKTAERLV 125 >gi|158320755|ref|YP_001513262.1| Holliday junction DNA helicase RuvA [Alkaliphilus oremlandii OhILAs] gi|167012655|sp|A8MHI4|RUVA_ALKOO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|158140954|gb|ABW19266.1| Holliday junction DNA helicase RuvA [Alkaliphilus oremlandii OhILAs] Length = 194 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHL 35 K++ + I L++ PG G ++A R L L Sbjct: 94 PNKLSAYILSKDISALSKAPGVGKKTAERIILEL 127 >gi|307130888|ref|YP_003882904.1| component of RuvABC resolvasome, regulatory subunit [Dickeya dadantii 3937] gi|306528417|gb|ADM98347.1| component of RuvABC resolvasome, regulatory subunit [Dickeya dadantii 3937] Length = 205 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 INALVKLPGVGKKTAERLV 125 >gi|270157092|ref|ZP_06185749.1| Holliday junction DNA helicase RuvA [Legionella longbeachae D-4968] gi|289164497|ref|YP_003454635.1| holliday junction DNA helicase [Legionella longbeachae NSW150] gi|269989117|gb|EEZ95371.1| Holliday junction DNA helicase RuvA [Legionella longbeachae D-4968] gi|288857670|emb|CBJ11513.1| holliday junction DNA helicase [Legionella longbeachae NSW150] Length = 198 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRAT 32 IT E I+ L ++PG G ++A R Sbjct: 92 SSITPNEFIECIQQENAVFLMKLPGIGKKTAERLV 126 >gi|271500732|ref|YP_003333757.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech586] gi|270344287|gb|ACZ77052.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech586] Length = 205 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 INALVKLPGVGKKTAERLV 125 >gi|241760730|ref|ZP_04758822.1| holliday junction DNA helicase RuvA [Neisseria flavescens SK114] gi|241318911|gb|EER55437.1| holliday junction DNA helicase RuvA [Neisseria flavescens SK114] Length = 194 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 + E+ I + + R+ PG G ++A R L L Sbjct: 91 SAMNADELAQAIAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|225077350|ref|ZP_03720549.1| hypothetical protein NEIFLAOT_02410 [Neisseria flavescens NRL30031/H210] gi|224951342|gb|EEG32551.1| hypothetical protein NEIFLAOT_02410 [Neisseria flavescens NRL30031/H210] Length = 194 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 + E+ I + + R+ PG G ++A R L L Sbjct: 91 SAMNADELAQAIAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|85059239|ref|YP_454941.1| Holliday junction DNA helicase motor protein [Sodalis glossinidius str. 'morsitans'] gi|123752615|sp|Q2NTI9|RUVA_SODGM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|84779759|dbj|BAE74536.1| holliday junction DNA helicase RuvA [Sodalis glossinidius str. 'morsitans'] Length = 205 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 INALVKLPGVGKKTAERLV 125 >gi|319778457|ref|YP_004129370.1| Holliday junction DNA helicase RuvA [Taylorella equigenitalis MCE9] gi|317108481|gb|ADU91227.1| Holliday junction DNA helicase RuvA [Taylorella equigenitalis MCE9] Length = 191 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 ++ + N I+ L R+PG G ++A R L L Sbjct: 93 MSPDALYNAIEEQDSSQLERVPGIGKKTAARIILEL 128 >gi|253699567|ref|YP_003020756.1| Holliday junction DNA helicase RuvA [Geobacter sp. M21] gi|259495645|sp|C6E1S9|RUVA_GEOSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|251774417|gb|ACT16998.1| Holliday junction DNA helicase RuvA [Geobacter sp. M21] Length = 199 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 8/49 (16%) Query: 2 QKKITGKEIENLIK----ILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 + ++L+ L+ IPG G ++A R L L ++ + L Sbjct: 91 SNSEPSELADSLVNGNLARLSAIPGIGKKTAERLVLEL----KEKMKKL 135 >gi|197119680|ref|YP_002140107.1| Holliday junction DNA helicase RuvA [Geobacter bemidjiensis Bem] gi|226698732|sp|B5EAH2|RUVA_GEOBB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|197089040|gb|ACH40311.1| Holliday junction DNA helicase RuvA [Geobacter bemidjiensis Bem] Length = 199 Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 8/49 (16%) Query: 2 QKKITGKEIENLIK----ILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 + ++L+ L+ IPG G ++A R L L ++ + L Sbjct: 91 SNSEPSELADSLVNGNLARLSAIPGIGKKTAERLVLEL----KEKMKKL 135 >gi|116620084|ref|YP_822240.1| Holliday junction DNA helicase RuvA [Candidatus Solibacter usitatus Ellin6076] gi|122255537|sp|Q02AG7|RUVA_SOLUE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|116223246|gb|ABJ81955.1| Holliday junction DNA helicase RuvA [Candidatus Solibacter usitatus Ellin6076] Length = 197 Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L ++PG G ++A R L L Sbjct: 107 VEKLVKVPGVGKKTAERMVLEL 128 >gi|319786205|ref|YP_004145680.1| Holliday junction DNA helicase RuvA [Pseudoxanthomonas suwonensis 11-1] gi|317464717|gb|ADV26449.1| Holliday junction DNA helicase RuvA [Pseudoxanthomonas suwonensis 11-1] Length = 196 Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 9/44 (20%) Query: 9 EIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 E L++ L RIPG G ++A R + L LA Sbjct: 97 EFARLVQAGDVTALTRIPGIGKKTAERMVVEL----RDRAADLA 136 >gi|254496522|ref|ZP_05109393.1| holliday junction DNA helicase [Legionella drancourtii LLAP12] gi|254354261|gb|EET12925.1| holliday junction DNA helicase [Legionella drancourtii LLAP12] Length = 199 Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 IT E IK L ++PG G ++A R ++ ++ + +E Sbjct: 92 SSITPNEFIQCIKQEKAAFLTKLPGIGKKTAERLV---IEMRDS-IKQFSE 138 >gi|225164626|ref|ZP_03726870.1| Holliday junction resolvasome DNA-binding subunit-like protein [Opitutaceae bacterium TAV2] gi|224800771|gb|EEG19123.1| Holliday junction resolvasome DNA-binding subunit-like protein [Opitutaceae bacterium TAV2] Length = 219 Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Query: 2 QKKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 +++ +E I+ L++ PG G ++A R + L Sbjct: 91 MSRMSLPVLEGAIRAGDISSLSKCPGIGKKTAERLVVEL 129 >gi|118594338|ref|ZP_01551685.1| Holliday junction DNA helicase RuvA [Methylophilales bacterium HTCC2181] gi|118440116|gb|EAV46743.1| Holliday junction DNA helicase RuvA [Methylophilales bacterium HTCC2181] Length = 193 Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I +L +IPG G ++A R L L Sbjct: 107 INMLVKIPGIGKKTAERLVLEL 128 >gi|197284986|ref|YP_002150858.1| Holliday junction DNA helicase RuvA [Proteus mirabilis HI4320] gi|227355390|ref|ZP_03839791.1| Holliday junction ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906] gi|229560118|sp|B4ETP7|RUVA_PROMH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|194682473|emb|CAR42407.1| Holliday junction ATP-dependent DNA helicase [Proteus mirabilis HI4320] gi|227164614|gb|EEI49485.1| Holliday junction ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906] Length = 207 Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIEN-LIKILARIPGFGPRSARRAT 32 M + IEN I L ++PG G ++A R Sbjct: 94 MSARQFVTAIENESISSLVKLPGVGKKTAERLV 126 >gi|226329884|ref|ZP_03805402.1| hypothetical protein PROPEN_03797 [Proteus penneri ATCC 35198] gi|225200679|gb|EEG83033.1| hypothetical protein PROPEN_03797 [Proteus penneri ATCC 35198] Length = 206 Score = 39.8 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIEN-LIKILARIPGFGPRSARRAT 32 M + IEN I L ++PG G ++A R Sbjct: 94 MSARQFVTAIENESISSLVKLPGVGKKTAERLV 126 >gi|238926806|ref|ZP_04658566.1| crossover junction endodeoxyribonuclease [Selenomonas flueggei ATCC 43531] gi|238885338|gb|EEQ48976.1| crossover junction endodeoxyribonuclease [Selenomonas flueggei ATCC 43531] Length = 199 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 +K + ++PG G ++A R L++ K++L E + N V Sbjct: 106 VKGITKLPGIGKKTAERI---LLELKDKLSDVSVEDLPEGDNNVG 147 >gi|145294024|ref|YP_001139951.1| IS1294 transposase [Shigella dysenteriae Sd197] gi|141327056|gb|ABO87502.1| IS1294 transposase [Shigella dysenteriae Sd197] Length = 402 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 13/153 (8%) Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED-VADLWALERSKAV-NALY 107 + + C C+++ + ++D + W + + A Sbjct: 148 IFCAIHTYGRRLNCHPHVHVSVTCGCLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAW- 206 Query: 108 HVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID 167 G ++ + +SL+ + K ++ T G+ TA Y+ LK Sbjct: 207 -SEGLAMPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPP 263 Query: 168 VKITRLAY--GIPMGSELD--YLDDGTIFEAIR 196 + +RLA+ G G+ L YLD T A+ Sbjct: 264 IAASRLAHYNG---GASLSFRYLDHKTGETAME 293 >gi|261855148|ref|YP_003262431.1| Holliday junction DNA helicase RuvA [Halothiobacillus neapolitanus c2] gi|261835617|gb|ACX95384.1| Holliday junction DNA helicase RuvA [Halothiobacillus neapolitanus c2] Length = 206 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPL--AEAMANIYNKVC 58 I L R+PG G ++A R ++ +++L +A K+ Sbjct: 107 IAALIRLPGVGRKTAERLV---IEMRDRLAEGFFDGATLATAAGKMG 150 >gi|262170575|ref|ZP_06038253.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio mimicus MB-451] gi|261891651|gb|EEY37637.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio mimicus MB-451] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI + +P SA+R L+L E PL E + Sbjct: 29 QQLIHTFSTLPDI--ASAQRIALYLANDGELNTQPLIEWL 66 >gi|258622360|ref|ZP_05717385.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258585376|gb|EEW10100.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI + +P SA+R L+L E PL E + Sbjct: 29 QQLIHTFSTLPDI--ASAQRIALYLANDGELNTQPLIEWL 66 >gi|258625345|ref|ZP_05720244.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582386|gb|EEW07236.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI + +P SA+R L+L E PL E + Sbjct: 29 QQLIHTFSTLPDI--ASAQRIALYLANDGELNTQPLIEWL 66 >gi|71065275|ref|YP_264002.1| Holliday junction DNA helicase RuvA [Psychrobacter arcticus 273-4] gi|90135656|sp|Q4FTU0|RUVA_PSYA2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|71038260|gb|AAZ18568.1| Holliday junction DNA helicase subunit RuvA [Psychrobacter arcticus 273-4] Length = 207 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 8/47 (17%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKEQL 42 M ++ E++ ++ L RIPG G ++A+R L++ K++L Sbjct: 89 MLSAMSAAELKMHVEQESETALTRIPGIGKKTAQRL---LIELKDKL 132 >gi|325917782|ref|ZP_08179966.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas vesicatoria ATCC 35937] gi|325535998|gb|EGD07810.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas vesicatoria ATCC 35937] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128 >gi|184201011|ref|YP_001855218.1| Holliday junction DNA helicase RuvA [Kocuria rhizophila DC2201] gi|229560091|sp|B2GIL9|RUVA_KOCRD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|183581241|dbj|BAG29712.1| Holliday junction DNA helicase RuvA [Kocuria rhizophila DC2201] Length = 213 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 15 KILARIPGFGPRSARRATLHLVKK 38 K +PG GP+SARR L L K Sbjct: 108 KAFTAVPGIGPKSARRIVLELADK 131 >gi|166712990|ref|ZP_02244197.1| Holliday junction DNA helicase motor protein [Xanthomonas oryzae pv. oryzicola BLS256] gi|289661899|ref|ZP_06483480.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669612|ref|ZP_06490687.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128 >gi|58425878|gb|AAW74915.1| holliday junction binding protein, DNA helicase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 212 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 125 ITALTRIPGIGKKTAERMVVEL 146 >gi|84623202|ref|YP_450574.1| Holliday junction DNA helicase motor protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161899002|ref|YP_200300.2| Holliday junction DNA helicase RuvA [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577435|ref|YP_001914364.1| Holliday junction DNA helicase RuvA [Xanthomonas oryzae pv. oryzae PXO99A] gi|90146231|sp|Q5H2A6|RUVA_XANOR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123725563|sp|Q2P577|RUVA_XANOM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560139|sp|B2STK2|RUVA_XANOP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|84367142|dbj|BAE68300.1| holliday junction binding protein DNA helicase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521887|gb|ACD59832.1| holliday junction DNA helicase RuvA [Xanthomonas oryzae pv. oryzae PXO99A] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128 >gi|78048836|ref|YP_365011.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325929365|ref|ZP_08190495.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas perforans 91-118] gi|90146217|sp|Q3BQF2|RUVA_XANC5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|78037266|emb|CAJ25011.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325540277|gb|EGD11889.1| Holliday junction DNA helicase subunit RuvA [Xanthomonas perforans 91-118] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128 >gi|21232455|ref|NP_638372.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767461|ref|YP_242223.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. campestris str. 8004] gi|188990567|ref|YP_001902577.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. campestris str. B100] gi|325921870|ref|ZP_08183684.1| Holliday junction DNA helicase RuvA [Xanthomonas gardneri ATCC 19865] gi|24212373|sp|Q8P6E5|RUVA_XANCP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|81306559|sp|Q4UXM0|RUVA_XANC8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560138|sp|B0RPY4|RUVA_XANCB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|21114237|gb|AAM42296.1| holliday junction binding protein, DNA helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572793|gb|AAY48203.1| holliday junction binding protein, DNA helicase [Xanthomonas campestris pv. campestris str. 8004] gi|167732327|emb|CAP50519.1| Holliday junction DNA helicase RuvA [Xanthomonas campestris pv. campestris] gi|325547651|gb|EGD18691.1| Holliday junction DNA helicase RuvA [Xanthomonas gardneri ATCC 19865] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128 >gi|21243875|ref|NP_643457.1| Holliday junction DNA helicase RuvA [Xanthomonas axonopodis pv. citri str. 306] gi|294626863|ref|ZP_06705455.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665404|ref|ZP_06730692.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24212375|sp|Q8PHV0|RUVA_XANAC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|21109477|gb|AAM37993.1| holliday junction binding protein DNA helicase [Xanthomonas axonopodis pv. citri str. 306] gi|292598877|gb|EFF43022.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604815|gb|EFF48178.1| Holliday junction DNA helicase motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 194 Score = 39.8 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L RIPG G ++A R + L Sbjct: 107 ITALTRIPGIGKKTAERMVVEL 128 >gi|315126271|ref|YP_004068274.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas sp. SM9913] gi|315014785|gb|ADT68123.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas sp. SM9913] Length = 205 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 4/35 (11%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 L ++PG G ++A R L + + L + Sbjct: 109 ALVKLPGVGKKTAERLVLEM----KDRLKNWGNDL 139 >gi|242280346|ref|YP_002992475.1| Holliday junction DNA helicase RuvA [Desulfovibrio salexigens DSM 2638] gi|259495638|sp|C6C065|RUVA_DESAD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|242123240|gb|ACS80936.1| Holliday junction DNA helicase RuvA [Desulfovibrio salexigens DSM 2638] Length = 203 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 13/64 (20%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57 + K++++L+ K L+ +PG GP+SA R L +K K + + + + Sbjct: 92 SQFGPKDLQDLVFREDVKTLSIVPGIGPKSA-RQILWSLKDKME-------TLKSATVRS 143 Query: 58 CLCS 61 C Sbjct: 144 GACP 147 >gi|118581082|ref|YP_902332.1| Holliday junction DNA helicase RuvA [Pelobacter propionicus DSM 2379] gi|166230581|sp|A1ASF4|RUVA_PELPD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|118503792|gb|ABL00275.1| Holliday junction DNA helicase subunit RuvA [Pelobacter propionicus DSM 2379] Length = 198 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I++L+ +PG G ++A R L L Sbjct: 106 IRMLSAVPGIGKKTAERLVLEL 127 >gi|325203380|gb|ADY98833.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M01-240355] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|325135068|gb|EGC57696.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M13399] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|313669264|ref|YP_004049548.1| Holliday junction DNA helicase [Neisseria lactamica ST-640] gi|313006726|emb|CBN88196.1| Holliday junction DNA helicase [Neisseria lactamica 020-06] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|309379780|emb|CBX21556.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|254805692|ref|YP_003083913.1| holliday junction DNA helicase [Neisseria meningitidis alpha14] gi|254669234|emb|CBA08082.1| holliday junction DNA helicase [Neisseria meningitidis alpha14] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|240017426|ref|ZP_04723966.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae FA6140] gi|240081568|ref|ZP_04726111.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae FA19] gi|240113847|ref|ZP_04728337.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae MS11] gi|240126556|ref|ZP_04739442.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae SK-92-679] gi|240129018|ref|ZP_04741679.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae SK-93-1035] gi|268597664|ref|ZP_06131831.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae FA19] gi|268599915|ref|ZP_06134082.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae MS11] gi|268685136|ref|ZP_06151998.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae SK-92-679] gi|268687398|ref|ZP_06154260.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae SK-93-1035] gi|268551452|gb|EEZ46471.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae FA19] gi|268584046|gb|EEZ48722.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae MS11] gi|268625420|gb|EEZ57820.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae SK-92-679] gi|268627682|gb|EEZ60082.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae SK-93-1035] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|261400495|ref|ZP_05986620.1| holliday junction DNA helicase RuvA [Neisseria lactamica ATCC 23970] gi|269209755|gb|EEZ76210.1| holliday junction DNA helicase RuvA [Neisseria lactamica ATCC 23970] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|59802051|ref|YP_208763.1| Holliday junction DNA helicase motor protein [Neisseria gonorrhoeae FA 1090] gi|194099623|ref|YP_002002754.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae NCCP11945] gi|239999822|ref|ZP_04719746.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae 35/02] gi|240014978|ref|ZP_04721891.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae DGI18] gi|240116581|ref|ZP_04730643.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID18] gi|240118805|ref|ZP_04732867.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID1] gi|240122047|ref|ZP_04735009.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID24-1] gi|240124344|ref|ZP_04737300.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae PID332] gi|254494604|ref|ZP_05107775.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae 1291] gi|260439658|ref|ZP_05793474.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae DGI2] gi|268595632|ref|ZP_06129799.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae 35/02] gi|268602250|ref|ZP_06136417.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae PID18] gi|268604516|ref|ZP_06138683.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae PID1] gi|268682971|ref|ZP_06149833.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae PID332] gi|291042899|ref|ZP_06568640.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae DGI2] gi|293398091|ref|ZP_06642296.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae F62] gi|75355491|sp|Q5F636|RUVA_NEIG1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560109|sp|B4RPG0|RUVA_NEIG2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|59718946|gb|AAW90351.1| putative Holliday junction DNA helicase [Neisseria gonorrhoeae FA 1090] gi|193934913|gb|ACF30737.1| Holliday junction DNA helicase motor protein [Neisseria gonorrhoeae NCCP11945] gi|226513644|gb|EEH62989.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae 1291] gi|268549021|gb|EEZ44439.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae 35/02] gi|268586381|gb|EEZ51057.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae PID18] gi|268588647|gb|EEZ53323.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae PID1] gi|268623255|gb|EEZ55655.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae PID332] gi|291013333|gb|EFE05299.1| holliday junction DNA helicase motor protein [Neisseria gonorrhoeae DGI2] gi|291611354|gb|EFF40424.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae F62] gi|317165112|gb|ADV08653.1| Holliday junction DNA helicase RuvA [Neisseria gonorrhoeae TCDC-NG08107] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|15676189|ref|NP_273321.1| Holliday junction DNA helicase motor protein [Neisseria meningitidis MC58] gi|20455266|sp|Q9K1A2|RUVA_NEIMB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|7225489|gb|AAF40719.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis MC58] gi|261391796|emb|CAX49251.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis 8013] gi|316985194|gb|EFV64146.1| holliday junction DNA helicase RuvA [Neisseria meningitidis H44/76] gi|325137090|gb|EGC59686.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M0579] gi|325139154|gb|EGC61700.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis ES14902] gi|325141101|gb|EGC63604.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis CU385] gi|325199468|gb|ADY94923.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis H44/76] gi|325202908|gb|ADY98362.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M01-240149] gi|325207293|gb|ADZ02745.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis NZ-05/33] Length = 194 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|297569179|ref|YP_003690523.1| Holliday junction DNA helicase RuvA [Desulfurivibrio alkaliphilus AHT2] gi|296925094|gb|ADH85904.1| Holliday junction DNA helicase RuvA [Desulfurivibrio alkaliphilus AHT2] Length = 215 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L ++PG G ++A R L L Sbjct: 107 IVFLKKLPGVGKKTAERLCLEL 128 >gi|255658187|ref|ZP_05403596.1| holliday junction DNA helicase RuvA [Mitsuokella multacida DSM 20544] gi|260849495|gb|EEX69502.1| holliday junction DNA helicase RuvA [Mitsuokella multacida DSM 20544] Length = 199 Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG G +SA R L L Sbjct: 109 LTKLPGIGKKSAERLILEL 127 >gi|158316901|ref|YP_001509409.1| DNA recombination protein RuvA [Frankia sp. EAN1pec] gi|158112306|gb|ABW14503.1| DNA recombination protein RuvA domain I [Frankia sp. EAN1pec] Length = 239 Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG G +SA+R L L Sbjct: 109 LTKVPGIGRKSAQRIVLDL 127 >gi|126656681|ref|ZP_01727895.1| Holliday junction DNA helicase motor protein [Cyanothece sp. CCY0110] gi|126621901|gb|EAZ92609.1| Holliday junction DNA helicase motor protein [Cyanothece sp. CCY0110] Length = 212 Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 +E L++ L++ PG G ++A R L L Sbjct: 101 LEELVQAIVTGNIRILSQTPGIGKKTAERIALEL 134 >gi|332712357|ref|ZP_08432284.1| holliday junction DNA helicase subunit RuvA [Lyngbya majuscula 3L] gi|332348831|gb|EGJ28444.1| holliday junction DNA helicase subunit RuvA [Lyngbya majuscula 3L] Length = 211 Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I+ L++ PG G ++A R L L Sbjct: 114 IRALSKTPGVGSKTAERIALEL 135 >gi|90417110|ref|ZP_01225038.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium HTCC2207] gi|90331126|gb|EAS46382.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium HTCC2207] Length = 199 Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLG 44 I L ++PG G ++A R L++ ++++ Sbjct: 107 IATLVKLPGVGKKTAERL---LIEMRDKIGD 134 >gi|262404790|ref|ZP_06081345.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio sp. RC586] gi|262349822|gb|EEY98960.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio sp. RC586] Length = 194 Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI+ + +P SA+R L+L E PL E + Sbjct: 29 QQLIQTFSTLPEI--ASAQRIALYLANDGELNTQPLIEWL 66 >gi|261211572|ref|ZP_05925860.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio sp. RC341] gi|260839527|gb|EEX66153.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio sp. RC341] Length = 194 Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI+ + +P SA+R L+L E PL E + Sbjct: 29 QQLIQTFSTLPEI--ASAQRIALYLANDGELNTQPLIEWL 66 >gi|77460629|ref|YP_350136.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens Pf0-1] gi|90135610|sp|Q3K7V9|RUVA_PSEPF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|77384632|gb|ABA76145.1| holliday junction helicase subunit B [Pseudomonas fluorescens Pf0-1] Length = 202 Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++ E++ LI L ++PG G ++A R Sbjct: 90 MSSLEVDELIRCVQSQDTSALTKVPGVGKKTAERL 124 >gi|226498646|ref|NP_001141776.1| hypothetical protein LOC100273912 [Zea mays] gi|194705894|gb|ACF87031.1| unknown [Zea mays] Length = 419 Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 18/32 (56%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKK 39 KE+ ++I+ L +PG GP+ A L + + Sbjct: 299 KELSDVIEALCTLPGVGPKVAACIALFSLDQN 330 >gi|283457993|ref|YP_003362600.1| holliday junction resolvasome, DNA-binding subunit [Rothia mucilaginosa DY-18] gi|283134015|dbj|BAI64780.1| holliday junction resolvasome, DNA-binding subunit [Rothia mucilaginosa DY-18] Length = 209 Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%) Query: 15 KILARIPGFGPRSARRATLHL-----VKKKEQLLGPLAEAM 50 K ++PG GP+ ARR L L + + PL++ + Sbjct: 110 KAFTKVPGIGPKGARRIVLELAGKLILSDGQTDELPLSQGI 150 >gi|255327194|ref|ZP_05368269.1| holliday junction DNA helicase RuvA [Rothia mucilaginosa ATCC 25296] gi|255295812|gb|EET75154.1| holliday junction DNA helicase RuvA [Rothia mucilaginosa ATCC 25296] Length = 206 Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%) Query: 15 KILARIPGFGPRSARRATLHL-----VKKKEQLLGPLAEAM 50 K ++PG GP+ ARR L L + + PL++ + Sbjct: 107 KAFTKVPGIGPKGARRIVLELAGKLILSDGQTDELPLSQGI 147 >gi|222055417|ref|YP_002537779.1| Holliday junction DNA helicase RuvA [Geobacter sp. FRC-32] gi|254766963|sp|B9LZC5|RUVA_GEOSF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|221564706|gb|ACM20678.1| Holliday junction DNA helicase RuvA [Geobacter sp. FRC-32] Length = 199 Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 LA IPG G ++A R L L + + L Sbjct: 110 LATIPGIGKKTAERLVLEL----REKVKKLGH 137 >gi|309789628|ref|ZP_07684209.1| Holliday junction DNA helicase RuvA [Oscillochloris trichoides DG6] gi|308228364|gb|EFO82011.1| Holliday junction DNA helicase RuvA [Oscillochloris trichoides DG6] Length = 198 Score = 39.5 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 16 ILARIPGFGPRSARRATLHL 35 LAR+PG G ++A R L L Sbjct: 109 ALARVPGIGKKTAERLVLEL 128 >gi|226311452|ref|YP_002771346.1| Holliday junction ATP-dependent DNA helicase [Brevibacillus brevis NBRC 100599] gi|254766947|sp|C0ZAN3|RUVA_BREBN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226094400|dbj|BAH42842.1| Holliday junction ATP-dependent DNA helicase [Brevibacillus brevis NBRC 100599] Length = 205 Score = 39.5 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L + PG G ++A+R L L Sbjct: 106 VTYLTKFPGIGKKTAQRIILDL 127 >gi|332968271|gb|EGK07345.1| crossover junction ATP-dependent DNA helicase RuvA [Kingella kingae ATCC 23330] Length = 188 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ I + + R+ PG G ++A R L L Sbjct: 84 SAMTTDELAQAIANEDVKRLSSAPGIGKKTAERMILEL 121 >gi|269837708|ref|YP_003319936.1| Holliday junction DNA helicase RuvA [Sphaerobacter thermophilus DSM 20745] gi|269786971|gb|ACZ39114.1| Holliday junction DNA helicase RuvA [Sphaerobacter thermophilus DSM 20745] Length = 193 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L+R+PG G ++A R L L Sbjct: 107 IAALSRVPGIGKKTASRIILEL 128 >gi|188585553|ref|YP_001917098.1| helix-hairpin-helix motif [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350240|gb|ACB84510.1| helix-hairpin-helix motif [Natranaerobius thermophilus JW/NM-WN-LF] Length = 425 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 11/58 (18%) Query: 4 KITGKEIENLIKI-LARIPGFGPRSARRATLHLVKKKE------QLLGPLAEAMANIY 54 + +EI K L RIPG GP+SARR +K ++ + L + + Sbjct: 333 HLFPQEINQASKKMLLRIPGIGPKSARRI----LKARKHFQLGFEDLKRMGIVLKRAK 386 >gi|77360814|ref|YP_340389.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas haloplanktis TAC125] gi|90135604|sp|Q3IIJ1|RUVA_PSEHT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|76875725|emb|CAI86946.1| Holliday junction helicase, subunit A [Pseudoalteromonas haloplanktis TAC125] Length = 205 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 4/35 (11%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 L ++PG G ++A R L + + L + Sbjct: 109 SLVKLPGVGKKTAERLVLEM----KDRLKNWGNDL 139 >gi|84496343|ref|ZP_00995197.1| DNA recombination protein, RuvA [Janibacter sp. HTCC2649] gi|84383111|gb|EAP98992.1| DNA recombination protein, RuvA [Janibacter sp. HTCC2649] Length = 201 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 7/47 (14%) Query: 17 LARIPGFGPRSARRATLHLVKK-------KEQLLGPLAEAMANIYNK 56 L +IPG G +SA R L L K + P A ++ + Sbjct: 109 LTKIPGVGKKSAERLVLELKDKVGMPSGSPGADVTPSAASLGDAKRD 155 >gi|298370450|ref|ZP_06981766.1| holliday junction DNA helicase RuvA [Neisseria sp. oral taxon 014 str. F0314] gi|298281910|gb|EFI23399.1| holliday junction DNA helicase RuvA [Neisseria sp. oral taxon 014 str. F0314] Length = 193 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 ++ E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMSADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|71909671|ref|YP_287258.1| Holliday junction DNA helicase motor protein [Dechloromonas aromatica RCB] gi|90134857|sp|Q478E3|RUVA_DECAR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|71849292|gb|AAZ48788.1| Holliday junction DNA helicase subunit RuvA [Dechloromonas aromatica RCB] Length = 192 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 7/57 (12%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 + +E+ LI +IPG G ++A R L++ K +L ++ + Sbjct: 101 AVAQQELGRLI----KIPGIGKKTAERL---LLELKGKLADATGVSLHPAVDDSKQD 150 >gi|281412224|ref|YP_003346303.1| Holliday junction DNA helicase RuvA [Thermotoga naphthophila RKU-10] gi|281373327|gb|ADA66889.1| Holliday junction DNA helicase RuvA [Thermotoga naphthophila RKU-10] Length = 188 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128 >gi|163783946|ref|ZP_02178915.1| Holliday junction resolvasome DNA-binding subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159880781|gb|EDP74316.1| Holliday junction resolvasome DNA-binding subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 180 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I +L+ +PG G ++A R L L Sbjct: 101 IDLLSSVPGIGKKTASRIILEL 122 >gi|6685946|sp|Q9WY12|RUVA_THEMA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA Length = 188 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128 >gi|332285258|ref|YP_004417169.1| Holliday junction DNA helicase motor protein [Pusillimonas sp. T7-7] gi|330429211|gb|AEC20545.1| Holliday junction DNA helicase motor protein [Pusillimonas sp. T7-7] Length = 192 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 ++ E+ N I L R+PG G ++A R L++ + +L G LA Sbjct: 93 MSVDELANAITQQETGLLTRVPGIGKKTAERL---LLELRGKLGGDLAH 138 >gi|255656790|ref|ZP_05402199.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-23m63] gi|296452380|ref|ZP_06894081.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium difficile NAP08] gi|296877729|ref|ZP_06901756.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium difficile NAP07] gi|296258710|gb|EFH05604.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium difficile NAP08] gi|296431262|gb|EFH17082.1| crossover junction ATP-dependent DNA helicase RuvA [Clostridium difficile NAP07] Length = 200 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 24/79 (30%) Query: 14 IKILARIPGFGPRSARRATLH---------------LVKKKEQLLGP---------LAEA 49 I L++ PG G ++A R L L+ +K L+ L Sbjct: 106 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 165 Query: 50 MANIYNKVCLCSICGNVDT 68 +A V C G Sbjct: 166 LAESKEAVQKCKKDGMNTE 184 >gi|148269895|ref|YP_001244355.1| Holliday junction DNA helicase RuvA [Thermotoga petrophila RKU-1] gi|166231455|sp|A5IKQ6|RUVA_THEP1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|147735439|gb|ABQ46779.1| Holliday junction DNA helicase subunit RuvA [Thermotoga petrophila RKU-1] Length = 188 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128 >gi|326560238|gb|EGE10626.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 7169] gi|326566444|gb|EGE16594.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis BC1] Length = 204 Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ EI++ I+ L R+PG G ++A+R L L Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128 >gi|67922170|ref|ZP_00515685.1| DNA recombination protein, RuvA [Crocosphaera watsonii WH 8501] gi|67856070|gb|EAM51314.1| DNA recombination protein, RuvA [Crocosphaera watsonii WH 8501] Length = 210 Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 +E L++ L++ PG G ++A R L L Sbjct: 101 LEELVQAIVTGNIRTLSQTPGVGKKTAERIALEL 134 >gi|304436498|ref|ZP_07396472.1| crossover junction ATP-dependent DNA helicase RuvA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370544|gb|EFM24195.1| crossover junction ATP-dependent DNA helicase RuvA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 199 Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 3/31 (9%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLG 44 +K + ++PG G ++A R L++ K++L Sbjct: 106 VKGITKLPGIGKKTAERI---LLELKDKLSD 133 >gi|78221965|ref|YP_383712.1| Holliday junction DNA helicase RuvA [Geobacter metallireducens GS-15] gi|123729330|sp|Q39XN7|RUVA_GEOMG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|78193220|gb|ABB30987.1| Holliday junction DNA helicase subunit RuvA [Geobacter metallireducens GS-15] Length = 199 Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Query: 12 NLIKILARIPGFGPRSARRATLHL 35 NL++ L+ IPG G ++A R L L Sbjct: 106 NLVR-LSSIPGIGKKTAERLVLEL 128 >gi|61657364|emb|CAI44281.1| holliday junction DNA helicase [Thermotoga naphthophila RKU-10] Length = 191 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131 >gi|15642939|ref|NP_227980.1| Holliday junction DNA helicase RuvA [Thermotoga maritima MSB8] gi|4980659|gb|AAD35258.1|AE001701_11 Holliday junction DNA helicase [Thermotoga maritima MSB8] Length = 191 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131 >gi|268679680|ref|YP_003304111.1| Holliday junction DNA helicase RuvA [Sulfurospirillum deleyianum DSM 6946] gi|268617711|gb|ACZ12076.1| Holliday junction DNA helicase RuvA [Sulfurospirillum deleyianum DSM 6946] Length = 186 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 I ++PG GP+SA+R LV+ + L L E N Sbjct: 107 ISAFQKVPGIGPKSAKRI---LVELSDFSLQLLHEDFTN 142 >gi|229470526|sp|B4RTT9|RUVA_ALTMD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA Length = 206 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + LA +PG G ++A R + L Sbjct: 107 VSALASLPGIGKKTAERLVVEL 128 >gi|326575817|gb|EGE25740.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis CO72] Length = 204 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ EI++ I+ L R+PG G ++A+R L L Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128 >gi|114321641|ref|YP_743324.1| Holliday junction DNA helicase RuvA [Alkalilimnicola ehrlichii MLHE-1] gi|122310889|sp|Q0A5Q3|RUVA_ALHEH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|114228035|gb|ABI57834.1| Holliday junction DNA helicase subunit RuvA [Alkalilimnicola ehrlichii MLHE-1] Length = 208 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 + + ++ I+ L R+PG G ++A+R + L Sbjct: 93 MNAEGLQRCIEREDVATLTRLPGVGRKTAQRLIVEL 128 >gi|325205349|gb|ADZ00802.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M04-240196] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|325128974|gb|EGC51825.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis N1568] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|304389092|ref|ZP_07371136.1| crossover junction ATP-dependent DNA helicase RuvA [Neisseria meningitidis ATCC 13091] gi|304336965|gb|EFM03155.1| crossover junction ATP-dependent DNA helicase RuvA [Neisseria meningitidis ATCC 13091] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|296313720|ref|ZP_06863661.1| holliday junction DNA helicase RuvA [Neisseria polysaccharea ATCC 43768] gi|296839643|gb|EFH23581.1| holliday junction DNA helicase RuvA [Neisseria polysaccharea ATCC 43768] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|254674127|emb|CBA09911.1| holliday junction DNA helicase [Neisseria meningitidis alpha275] gi|325145258|gb|EGC67537.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M01-240013] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|261379647|ref|ZP_05984220.1| holliday junction DNA helicase RuvA [Neisseria subflava NJ9703] gi|284798132|gb|EFC53479.1| holliday junction DNA helicase RuvA [Neisseria subflava NJ9703] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 + E+ I + + R+ PG G ++A R L L Sbjct: 93 MNADELAQAIAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|261378519|ref|ZP_05983092.1| holliday junction DNA helicase RuvA [Neisseria cinerea ATCC 14685] gi|269145069|gb|EEZ71487.1| holliday junction DNA helicase RuvA [Neisseria cinerea ATCC 14685] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|255101977|ref|ZP_05330954.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-63q42] gi|255307845|ref|ZP_05352016.1| Holliday junction DNA helicase RuvA [Clostridium difficile ATCC 43255] gi|328887746|emb|CAJ69694.2| Holliday junction ATP-dependent DNA helicase RuvA [Clostridium difficile] Length = 200 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 24/79 (30%) Query: 14 IKILARIPGFGPRSARRATLH---------------LVKKKEQLLGP---------LAEA 49 I L++ PG G ++A R L L+ +K L+ L Sbjct: 106 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 165 Query: 50 MANIYNKVCLCSICGNVDT 68 ++ V C G Sbjct: 166 LSESKEAVQKCKKDGMNTE 184 >gi|161870798|ref|YP_001599971.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis 053442] gi|189045759|sp|A9M3B7|RUVA_NEIM0 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|161596351|gb|ABX74011.1| Holliday junction DNA helicase [Neisseria meningitidis 053442] gi|308388484|gb|ADO30804.1| Holliday junction DNA helicase [Neisseria meningitidis alpha710] gi|325130991|gb|EGC53718.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis OX99.30304] gi|325131591|gb|EGC54298.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis M6190] gi|325143104|gb|EGC65451.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis 961-5945] gi|325143174|gb|EGC65520.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis 961-5945] gi|325197549|gb|ADY93005.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis G2136] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|121634135|ref|YP_974380.1| Holliday junction DNA helicase motor protein [Neisseria meningitidis FAM18] gi|166230574|sp|A1KRU4|RUVA_NEIMF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|120865841|emb|CAM09573.1| Holliday junction DNA helicase [Neisseria meningitidis FAM18] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|218768952|ref|YP_002343464.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis Z2491] gi|20455265|sp|Q9JSM5|RUVA_NEIMA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|121052960|emb|CAM09314.1| Holliday junction DNA helicase [Neisseria meningitidis Z2491] gi|254671573|emb|CBA09225.1| holliday junction DNA helicase [Neisseria meningitidis alpha153] gi|319411250|emb|CBY91657.1| Holliday junction DNA helicase RuvA [Neisseria meningitidis WUE 2594] Length = 194 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|207108290|ref|ZP_03242452.1| recombination protein RecR [Helicobacter pylori HPKX_438_CA4C1] Length = 49 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%) Query: 135 EVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + I+E+IFA T+ + YI DKL+ + T++ Sbjct: 1 MEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKI 39 >gi|170288580|ref|YP_001738818.1| Holliday junction DNA helicase RuvA [Thermotoga sp. RQ2] gi|170176083|gb|ACB09135.1| Holliday junction DNA helicase RuvA [Thermotoga sp. RQ2] Length = 188 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 107 VEGLSKLPGISKKTAERIVMEL 128 >gi|61657382|emb|CAI44298.1| holliday junction DNA helicase [Thermotoga petrophila] Length = 191 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131 >gi|332534227|ref|ZP_08410072.1| holliday junction DNA helicase RuvA [Pseudoalteromonas haloplanktis ANT/505] gi|332036307|gb|EGI72778.1| holliday junction DNA helicase RuvA [Pseudoalteromonas haloplanktis ANT/505] Length = 205 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 4/35 (11%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 L ++PG G ++A R L + + L + Sbjct: 109 SLVKLPGVGKKTAERLVLEM----KDRLKDWGNDL 139 >gi|330828297|ref|YP_004391249.1| Holliday junction ATP-dependent DNA helicase ruvA [Aeromonas veronii B565] gi|328803433|gb|AEB48632.1| Holliday junction ATP-dependent DNA helicase ruvA [Aeromonas veronii B565] Length = 229 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 132 ISSLVKLPGVGKKTAERLV 150 >gi|170077885|ref|YP_001734523.1| Holliday junction DNA helicase RuvA [Synechococcus sp. PCC 7002] gi|229560135|sp|B1XL12|RUVA_SYNP2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|169885554|gb|ACA99267.1| Holliday junction DNA helicase RuvA [Synechococcus sp. PCC 7002] Length = 209 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 LA+ PG G ++A R L L Sbjct: 115 QLAKAPGIGKKTAERLALEL 134 >gi|119472454|ref|ZP_01614553.1| Holliday junction DNA helicase motor protein [Alteromonadales bacterium TW-7] gi|119444891|gb|EAW26190.1| Holliday junction DNA helicase motor protein [Alteromonadales bacterium TW-7] Length = 205 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 4/35 (11%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 L ++PG G ++A R L + + L + Sbjct: 109 SLVKLPGVGKKTAERLVLEM----KDRLKDWGNDL 139 >gi|117618993|ref|YP_858104.1| Holliday junction DNA helicase RuvA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166229627|sp|A0KPA3|RUVA_AERHH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|117560400|gb|ABK37348.1| Holliday junction DNA helicase RuvA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 204 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISSLVKLPGVGKKTAERLV 125 >gi|326562883|gb|EGE13170.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 46P47B1] gi|326563676|gb|EGE13928.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 103P14B1] gi|326565244|gb|EGE15429.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 12P80B1] gi|326570251|gb|EGE20296.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis BC8] gi|326570988|gb|EGE21012.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis BC7] gi|326573284|gb|EGE23252.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis 101P30B1] gi|326576898|gb|EGE26804.1| Holliday junction DNA helicase RuvA [Moraxella catarrhalis O35E] Length = 204 Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ EI++ I+ L R+PG G ++A+R L L Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128 >gi|325267123|ref|ZP_08133791.1| crossover junction ATP-dependent DNA helicase RuvA [Kingella denitrificans ATCC 33394] gi|324981361|gb|EGC17005.1| crossover junction ATP-dependent DNA helicase RuvA [Kingella denitrificans ATCC 33394] Length = 194 Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 ++ E+ + K L+ +PG G ++A R L L Sbjct: 91 SALSSDELAQAVAQEDVKRLSSVPGIGKKTAERMILEL 128 >gi|126700422|ref|YP_001089319.1| Holliday junction DNA helicase RuvA [Clostridium difficile 630] Length = 203 Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 24/79 (30%) Query: 14 IKILARIPGFGPRSARRATLH---------------LVKKKEQLLGP---------LAEA 49 I L++ PG G ++A R L L+ +K L+ L Sbjct: 109 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 168 Query: 50 MANIYNKVCLCSICGNVDT 68 ++ V C G Sbjct: 169 LSESKEAVQKCKKDGMNTE 187 >gi|296113247|ref|YP_003627185.1| holliday junction DNA helicase RuvA [Moraxella catarrhalis RH4] gi|295920941|gb|ADG61292.1| holliday junction DNA helicase RuvA [Moraxella catarrhalis RH4] Length = 204 Score = 39.1 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ EI++ I+ L R+PG G ++A+R L L Sbjct: 89 MLSTLSVAEIKHAIETDYDAALVRVPGIGKKTAQRILLDL 128 >gi|254976401|ref|ZP_05272873.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-66c26] gi|255093787|ref|ZP_05323265.1| Holliday junction DNA helicase RuvA [Clostridium difficile CIP 107932] gi|255315538|ref|ZP_05357121.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-76w55] gi|255518201|ref|ZP_05385877.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-97b34] gi|255651317|ref|ZP_05398219.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-37x79] gi|260684381|ref|YP_003215666.1| Holliday junction DNA helicase RuvA [Clostridium difficile CD196] gi|260688040|ref|YP_003219174.1| Holliday junction DNA helicase RuvA [Clostridium difficile R20291] gi|306521149|ref|ZP_07407496.1| Holliday junction DNA helicase RuvA [Clostridium difficile QCD-32g58] gi|260210544|emb|CBA65075.1| holliday junction DNA helicase [Clostridium difficile CD196] gi|260214057|emb|CBE06222.1| holliday junction DNA helicase [Clostridium difficile R20291] Length = 200 Score = 39.1 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 24/79 (30%) Query: 14 IKILARIPGFGPRSARRATLH---------------LVKKKEQLLGP---------LAEA 49 I L++ PG G ++A R L L+ +K L+ L Sbjct: 106 IGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYT 165 Query: 50 MANIYNKVCLCSICGNVDT 68 ++ V C G Sbjct: 166 LSESKEAVQKCKKDGMNTE 184 >gi|61657514|emb|CAI44425.1| holliday junction DNA helicase [Thermotoga sp. RQ2] Length = 191 Score = 39.1 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L+++PG ++A R + L Sbjct: 110 VEGLSKLPGISKKTAERIVMEL 131 >gi|300770096|ref|ZP_07079975.1| crossover junction ATP-dependent DNA helicase RuvA [Sphingobacterium spiritivorum ATCC 33861] gi|300762572|gb|EFK59389.1| crossover junction ATP-dependent DNA helicase RuvA [Sphingobacterium spiritivorum ATCC 33861] Length = 194 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 10/57 (17%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL---VKK--KEQLLGPLAEA 49 IT +EI++ I + +I G GP++A+R L L +KK + L+ P+A Sbjct: 90 SSITPEEIQSAIINGQVAVIQKIKGIGPKTAQRLILELQDKLKKQGPDALISPVASK 146 >gi|296270037|ref|YP_003652669.1| Holliday junction DNA helicase RuvA [Thermobispora bispora DSM 43833] gi|296092824|gb|ADG88776.1| Holliday junction DNA helicase RuvA [Thermobispora bispora DSM 43833] Length = 206 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L +PG GP+SA+R L L Sbjct: 106 VKALTMVPGIGPKSAQRIMLEL 127 >gi|219849021|ref|YP_002463454.1| Holliday junction DNA helicase RuvA [Chloroflexus aggregans DSM 9485] gi|254766951|sp|B8GCH4|RUVA_CHLAD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|219543280|gb|ACL25018.1| Holliday junction DNA helicase RuvA [Chloroflexus aggregans DSM 9485] Length = 195 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + LAR+PG G ++A R L L Sbjct: 107 VARLARVPGIGKKTAERIVLEL 128 >gi|227538550|ref|ZP_03968599.1| crossover junction endodeoxyribonuclease [Sphingobacterium spiritivorum ATCC 33300] gi|227241469|gb|EEI91484.1| crossover junction endodeoxyribonuclease [Sphingobacterium spiritivorum ATCC 33300] Length = 194 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 10/55 (18%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL---VKK--KEQLLGPLA 47 IT +EI++ I + +I G GP++A+R L L +KK + L+ P+A Sbjct: 90 SSITPEEIQSAIINGQVAVIQKIKGIGPKTAQRLILELQDKLKKQGPDALISPVA 144 >gi|238898994|ref|YP_002924676.1| Holliday junction helicase, subunit A [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495647|sp|C4K7I5|RUVA_HAMD5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229466754|gb|ACQ68528.1| Holliday junction helicase, subunit A [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 204 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 ++I NLI ++PG G ++A R LV+ K+ + L + + Sbjct: 105 EDISNLI----KLPGVGKKTAERL---LVEMKD-RIKNLNKNL 139 >gi|145297804|ref|YP_001140645.1| Holliday junction DNA helicase RuvA [Aeromonas salmonicida subsp. salmonicida A449] gi|166229628|sp|A4SJ25|RUVA_AERS4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|142850576|gb|ABO88897.1| holliday junction DNA helicase RuvA [Aeromonas salmonicida subsp. salmonicida A449] Length = 204 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISSLIKLPGVGKKTAERLV 125 >gi|148263482|ref|YP_001230188.1| Holliday junction DNA helicase RuvA [Geobacter uraniireducens Rf4] gi|146396982|gb|ABQ25615.1| Holliday junction DNA helicase subunit RuvA [Geobacter uraniireducens Rf4] Length = 199 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 L+ IPG G ++A R L L ++K + +GP + Sbjct: 110 LSAIPGIGKKTAERLVLEL-REKVKKMGPFS 139 >gi|83647602|ref|YP_436037.1| Holliday junction DNA helicase RuvA [Hahella chejuensis KCTC 2396] gi|123739873|sp|Q2SCL2|RUVA_HAHCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|83635645|gb|ABC31612.1| Holliday junction DNA helicase RuvA [Hahella chejuensis KCTC 2396] Length = 204 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 10/44 (22%) Query: 3 KKITGKEI------ENLIKILARIPGFGPRSARRATLHLVKKKE 40 ++ E +NL + L ++PG G ++A R L++ ++ Sbjct: 91 SHMSPNEFVECVRGDNLTR-LTKMPGVGKKTAERL---LIEMRD 130 >gi|332305758|ref|YP_004433609.1| Holliday junction DNA helicase RuvA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173087|gb|AEE22341.1| Holliday junction DNA helicase RuvA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 207 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITALVKLPGVGKKTAERLV 125 >gi|302141786|emb|CBI18989.3| unnamed protein product [Vitis vinifera] Length = 204 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 10/63 (15%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQL----------LGPLAEAMANIYNKVC 58 +++ ++ L+ +PG GP+ A L + + + L +A Sbjct: 74 DLQEVVDALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELAGARLTPK 133 Query: 59 LCS 61 LCS Sbjct: 134 LCS 136 >gi|225459615|ref|XP_002285873.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 399 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 10/63 (15%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQL----------LGPLAEAMANIYNKVC 58 +++ ++ L+ +PG GP+ A L + + + L +A Sbjct: 269 DLQEVVDALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELAGARLTPK 328 Query: 59 LCS 61 LCS Sbjct: 329 LCS 331 >gi|72162493|ref|YP_290150.1| Holliday junction DNA helicase subunit RuvA [Thermobifida fusca YX] gi|90136068|sp|Q47N42|RUVA_THEFY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|71916225|gb|AAZ56127.1| Holliday junction DNA helicase subunit RuvA [Thermobifida fusca YX] Length = 202 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M T + I L R+PG G + A+R L L Sbjct: 88 MLSVHTPDALRRAIATEDTAALTRVPGIGKKGAQRIVLEL 127 >gi|109899252|ref|YP_662507.1| Holliday junction DNA helicase RuvA [Pseudoalteromonas atlantica T6c] gi|109701533|gb|ABG41453.1| Holliday junction DNA helicase subunit RuvA [Pseudoalteromonas atlantica T6c] Length = 209 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 109 ITALVKLPGVGKKTAERLV 127 >gi|327394173|dbj|BAK11595.1| Holliday junction DNA helicase RuvA [Pantoea ananatis AJ13355] Length = 175 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 78 IAALVKLPGVGKKTAERLV 96 >gi|291617754|ref|YP_003520496.1| RuvA [Pantoea ananatis LMG 20103] gi|291152784|gb|ADD77368.1| RuvA [Pantoea ananatis LMG 20103] Length = 204 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IAALVKLPGVGKKTAERLV 125 >gi|242239574|ref|YP_002987755.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech703] gi|242131631|gb|ACS85933.1| Holliday junction DNA helicase RuvA [Dickeya dadantii Ech703] Length = 204 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IGALVKLPGVGKKTAERLV 125 >gi|189424313|ref|YP_001951490.1| Holliday junction DNA helicase RuvA [Geobacter lovleyi SZ] gi|229560034|sp|B3E790|RUVA_GEOLS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189420572|gb|ACD94970.1| Holliday junction DNA helicase RuvA [Geobacter lovleyi SZ] Length = 200 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 I ++ ++ L+ IPG G ++A R L L Sbjct: 90 SNIQPPQLAAALQQGDLHKLSAIPGIGKKTAERLVLEL 127 >gi|300717084|ref|YP_003741887.1| Holliday junction ATP-dependent DNA helicase [Erwinia billingiae Eb661] gi|299062920|emb|CAX60040.1| Holliday junction ATP-dependent DNA helicase [Erwinia billingiae Eb661] Length = 205 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IAALVKLPGVGKKTAERLV 125 >gi|292488538|ref|YP_003531422.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia amylovora CFBP1430] gi|292899714|ref|YP_003539083.1| holliday junction DNA helicase [Erwinia amylovora ATCC 49946] gi|291199562|emb|CBJ46679.1| holliday junction DNA helicase [Erwinia amylovora ATCC 49946] gi|291553969|emb|CBA21014.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia amylovora CFBP1430] gi|312172681|emb|CBX80937.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia amylovora ATCC BAA-2158] Length = 204 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IAALVKLPGVGKKTAERLV 125 >gi|188533631|ref|YP_001907428.1| Holliday junction DNA helicase RuvA [Erwinia tasmaniensis Et1/99] gi|229560030|sp|B2VJ94|RUVA_ERWT9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|188028673|emb|CAO96535.1| Holliday junction ATP-dependent DNA helicase [Erwinia tasmaniensis Et1/99] Length = 204 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IAALVKLPGVGKKTAERLV 125 >gi|259908219|ref|YP_002648575.1| Holliday junction DNA helicase RuvA [Erwinia pyrifoliae Ep1/96] gi|224963841|emb|CAX55343.1| Holliday junction ATP-dependent DNA helicase [Erwinia pyrifoliae Ep1/96] gi|283478149|emb|CAY74065.1| Holliday junction ATP-dependent DNA helicase ruvA [Erwinia pyrifoliae DSM 12163] gi|310767866|gb|ADP12816.1| Holliday junction DNA helicase RuvA [Erwinia sp. Ejp617] Length = 204 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IAALVKLPGVGKKTAERLV 125 >gi|254468402|ref|ZP_05081808.1| Holliday junction DNA helicase RuvA [beta proteobacterium KB13] gi|207087212|gb|EDZ64495.1| Holliday junction DNA helicase RuvA [beta proteobacterium KB13] Length = 189 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 8/60 (13%) Query: 2 QKKITGKEIENL-IKILARIPGFGPRSARRATLHL-------VKKKEQLLGPLAEAMANI 53 IE + +L +IPG G ++A R + L +++ Q L + M + Sbjct: 94 SMDQFSNAIEQQDVSLLVKIPGIGRKTAERLIVELKDKQDLKLQQSSQHSKNLTDIMDAL 153 >gi|167629898|ref|YP_001680397.1| holliday junction DNA helicase ruva [Heliobacterium modesticaldum Ice1] gi|167592638|gb|ABZ84386.1| holliday junction DNA helicase ruva [Heliobacterium modesticaldum Ice1] Length = 274 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%) Query: 10 IENLIKILARIPGFGPRSARRATL----HLVKK 38 I + L RIPG G ++A+R + L+K+ Sbjct: 103 IAEDVLALTRIPGIGRKTAQRLVIELRDKLLKQ 135 >gi|15639532|ref|NP_218982.1| Holliday junction DNA helicase (ruvA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025771|ref|YP_001933543.1| Holliday junction DNA helicase, subunit A [Treponema pallidum subsp. pallidum SS14] gi|6094206|sp|O83554|RUVA_TREPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560146|sp|B2S3D5|RUVA_TREPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|3322833|gb|AAC65527.1| Holliday junction DNA helicase (ruvA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018346|gb|ACD70964.1| Holliday junction DNA helicase, subunit A [Treponema pallidum subsp. pallidum SS14] gi|291059920|gb|ADD72655.1| Holliday junction DNA helicase RuvA [Treponema pallidum subsp. pallidum str. Chicago] Length = 227 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 16 ILARIPGFGPRSARRATLHL 35 L RIPG G ++A+R L L Sbjct: 109 ALQRIPGIGKKTAQRMLLAL 128 >gi|319638740|ref|ZP_07993499.1| Holliday junction ATP-dependent DNA helicase ruvA [Neisseria mucosa C102] gi|317399981|gb|EFV80643.1| Holliday junction ATP-dependent DNA helicase ruvA [Neisseria mucosa C102] Length = 194 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 + E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMNADELAQAVAEEDVKRLSSAPGIGKKTAERMVLEL 128 >gi|295095544|emb|CBK84634.1| Holliday junction DNA helicase subunit RuvA [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 231 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ + N ++ L ++PG G ++A R +V+ K+ Sbjct: 120 MSAPQFVNAVEREDPAALIKLPGIGKKTAERL---IVEMKD 157 >gi|288939916|ref|YP_003442156.1| Holliday junction DNA helicase RuvA [Allochromatium vinosum DSM 180] gi|288895288|gb|ADC61124.1| Holliday junction DNA helicase RuvA [Allochromatium vinosum DSM 180] Length = 211 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 L R+PG G ++A R +++ +++L G + Sbjct: 109 ALTRLPGIGKKTAERL---IIEMRDRLGGVMI 137 >gi|261340247|ref|ZP_05968105.1| holliday junction DNA helicase RuvA [Enterobacter cancerogenus ATCC 35316] gi|288317332|gb|EFC56270.1| holliday junction DNA helicase RuvA [Enterobacter cancerogenus ATCC 35316] Length = 203 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ + N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAPQFVNAVEREDPAALIKLPGIGKKTAERL---IVEMKD 130 >gi|319941758|ref|ZP_08016080.1| Holliday junction DNA helicase RuvA [Sutterella wadsworthensis 3_1_45B] gi|319804691|gb|EFW01558.1| Holliday junction DNA helicase RuvA [Sutterella wadsworthensis 3_1_45B] Length = 193 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 13/20 (65%) Query: 16 ILARIPGFGPRSARRATLHL 35 +L ++PG G ++A R L L Sbjct: 109 LLTKVPGIGKKTAERLVLEL 128 >gi|308049716|ref|YP_003913282.1| Holliday junction DNA helicase subunit RuvA [Ferrimonas balearica DSM 9799] gi|307631906|gb|ADN76208.1| Holliday junction DNA helicase subunit RuvA [Ferrimonas balearica DSM 9799] Length = 207 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 17/33 (51%), Gaps = 5/33 (15%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRAT 32 ++ ++ + ++ L ++PG G ++A R Sbjct: 93 MSAEQFVDAVQAENITGLTKLPGVGKKTAERLV 125 >gi|229918406|ref|YP_002887052.1| Holliday junction DNA helicase RuvA [Exiguobacterium sp. AT1b] gi|259495643|sp|C4L522|RUVA_EXISA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229469835|gb|ACQ71607.1| Holliday junction DNA helicase RuvA [Exiguobacterium sp. AT1b] Length = 195 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35 + +I+ LI L + PG G ++A++ L L Sbjct: 88 VASGDIDALIDAIETENEKYLTKFPGVGKKTAKQMALDL 126 >gi|167769432|ref|ZP_02441485.1| hypothetical protein ANACOL_00762 [Anaerotruncus colihominis DSM 17241] gi|167668400|gb|EDS12530.1| hypothetical protein ANACOL_00762 [Anaerotruncus colihominis DSM 17241] Length = 214 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 16/28 (57%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M + E+ + ++ L ++PG G ++A Sbjct: 96 MLMEKYNGELPDTVEELTKLPGIGRKTA 123 >gi|152990842|ref|YP_001356564.1| Holliday junction DNA helicase RuvA [Nitratiruptor sp. SB155-2] gi|166230575|sp|A6Q3Z8|RUVA_NITSB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|151422703|dbj|BAF70207.1| holliday junction DNA helicase RuvA [Nitratiruptor sp. SB155-2] Length = 184 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 14/18 (77%) Query: 14 IKILARIPGFGPRSARRA 31 + +L ++PG GP+SA+R Sbjct: 105 VAMLKKVPGIGPKSAQRI 122 >gi|256827686|ref|YP_003151645.1| Holliday junction DNA helicase, RuvA subunit [Cryptobacterium curtum DSM 15641] gi|256583829|gb|ACU94963.1| Holliday junction DNA helicase, RuvA subunit [Cryptobacterium curtum DSM 15641] Length = 194 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 13/18 (72%) Query: 18 ARIPGFGPRSARRATLHL 35 +RIPG G ++A+R L L Sbjct: 111 SRIPGIGKKTAQRIILEL 128 >gi|296129641|ref|YP_003636891.1| Holliday junction DNA helicase RuvA [Cellulomonas flavigena DSM 20109] gi|296021456|gb|ADG74692.1| Holliday junction DNA helicase RuvA [Cellulomonas flavigena DSM 20109] Length = 202 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L R+PG G + A+R L L Sbjct: 106 IAALMRVPGIGRKGAQRIVLEL 127 >gi|6685961|sp|Q9ZNJ6|RUVA_CLOHI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|3892649|dbj|BAA34545.1| ruvA [Clostridium histolyticum] Length = 197 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 15/93 (16%) Query: 15 KILARIPGFGPRSARRATLHL-----------VKKKEQLLGPLAEAMANIYNKVCLCSIC 63 K+L + PG G ++A+R L L ++ + ++ + + + Sbjct: 108 KLLIKAPGIGKKTAQRIILELKDKLDVNLDEGIQTDSNDIKVSSKILEEAKEAL----MS 163 Query: 64 GNVDTTDPCAICIDQQRDASVIIVVEDVADLWA 96 + + + S+ I++++ Sbjct: 164 LGYSEKECEKALKNVEEKESLEIIIKESLKFLM 196 >gi|297621995|ref|YP_003710132.1| Holliday junction ATP-dependent DNA helicase ruvA [Waddlia chondrophila WSU 86-1044] gi|297377296|gb|ADI39126.1| Holliday junction ATP-dependent DNA helicase ruvA [Waddlia chondrophila WSU 86-1044] Length = 202 Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 16/22 (72%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + +++++PG G ++A+R + L Sbjct: 107 VAMISKVPGIGKKTAQRLVIEL 128 >gi|261821379|ref|YP_003259485.1| Holliday junction DNA helicase RuvA [Pectobacterium wasabiae WPP163] gi|261605392|gb|ACX87878.1| Holliday junction DNA helicase RuvA [Pectobacterium wasabiae WPP163] Length = 205 Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IGALIKLPGVGKKTAERLV 125 >gi|228475171|ref|ZP_04059897.1| holliday junction DNA helicase RuvA [Staphylococcus hominis SK119] gi|314936245|ref|ZP_07843592.1| holliday junction DNA helicase RuvA [Staphylococcus hominis subsp. hominis C80] gi|228270782|gb|EEK12184.1| holliday junction DNA helicase RuvA [Staphylococcus hominis SK119] gi|313654864|gb|EFS18609.1| holliday junction DNA helicase RuvA [Staphylococcus hominis subsp. hominis C80] Length = 201 Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57 T E++ I+ L + PG G ++AR+ L L K K ++ +E + + +V Sbjct: 94 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL-KGKVKITEETSETLLQVEGQV 149 >gi|227329529|ref|ZP_03833553.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 205 Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IGALIKLPGVGKKTAERLV 125 >gi|227111608|ref|ZP_03825264.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 205 Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IGALIKLPGVGKKTAERLV 125 >gi|50121417|ref|YP_050584.1| Holliday junction DNA helicase RuvA [Pectobacterium atrosepticum SCRI1043] gi|81644878|sp|Q6D4A1|RUVA_ERWCT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|49611943|emb|CAG75392.1| holliday junction DNA helicase [Pectobacterium atrosepticum SCRI1043] Length = 205 Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IGALIKLPGVGKKTAERLV 125 >gi|301060127|ref|ZP_07200994.1| Holliday junction DNA helicase RuvA [delta proteobacterium NaphS2] gi|300445639|gb|EFK09537.1| Holliday junction DNA helicase RuvA [delta proteobacterium NaphS2] Length = 200 Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 + +E+ I L IPG G ++A R L L Sbjct: 93 MGAEELLRAIAAGDAPRLQAIPGIGRKTAERIALEL 128 >gi|253688206|ref|YP_003017396.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259495651|sp|C6DFF1|RUVA_PECCP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|251754784|gb|ACT12860.1| Holliday junction DNA helicase RuvA [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 205 Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IGALIKLPGVGKKTAERLV 125 >gi|325105978|ref|YP_004275632.1| Holliday junction DNA helicase subunit RuvA [Pedobacter saltans DSM 12145] gi|324974826|gb|ADY53810.1| Holliday junction DNA helicase subunit RuvA [Pedobacter saltans DSM 12145] Length = 194 Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 M I+ EIE I ++ I G GP++A+R + L Sbjct: 88 MLSSISPIEIEQAIIKGEVGLIKSIKGIGPKTAQRLIIDL 127 >gi|152996211|ref|YP_001341046.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MWYL1] gi|189045756|sp|A6VXD2|RUVA_MARMS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|150837135|gb|ABR71111.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MWYL1] Length = 200 Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 8/56 (14%) Query: 3 KKITGKEI-----ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 ++ +E+ E+ + L RIPG G ++A R +++ +++L + + Sbjct: 91 SSMSSEELITNVQESDVTALTRIPGVGKKTAERL---IIELRDKLGQAAKTDLFSA 143 >gi|88861319|ref|ZP_01135950.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas tunicata D2] gi|88816698|gb|EAR26522.1| Holliday junction DNA helicase motor protein [Pseudoalteromonas tunicata D2] Length = 205 Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 4/37 (10%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 L ++PG G ++A R L + + L + N Sbjct: 109 SLVKLPGVGKKTAERLVLEM----KDRLKDWGRDLFN 141 >gi|260598336|ref|YP_003210907.1| Holliday junction DNA helicase RuvA [Cronobacter turicensis z3032] gi|260217513|emb|CBA31691.1| Holliday junction ATP-dependent DNA helicase ruvA [Cronobacter turicensis z3032] Length = 203 Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 5/33 (15%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRAT 32 ++ ++ N ++ L ++PG G ++A R Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERLV 125 >gi|156933560|ref|YP_001437476.1| Holliday junction DNA helicase RuvA [Cronobacter sakazakii ATCC BAA-894] gi|166230549|sp|A7MEA2|RUVA_ENTS8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|156531814|gb|ABU76640.1| hypothetical protein ESA_01380 [Cronobacter sakazakii ATCC BAA-894] Length = 203 Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 5/33 (15%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRAT 32 ++ ++ N ++ L ++PG G ++A R Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERLV 125 >gi|284048863|ref|YP_003399202.1| Holliday junction DNA helicase RuvA [Acidaminococcus fermentans DSM 20731] gi|283953084|gb|ADB47887.1| Holliday junction DNA helicase RuvA [Acidaminococcus fermentans DSM 20731] Length = 204 Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG G ++A R L L Sbjct: 109 LTKLPGIGKKTAERLLLEL 127 >gi|251789856|ref|YP_003004577.1| Holliday junction DNA helicase RuvA [Dickeya zeae Ech1591] gi|247538477|gb|ACT07098.1| Holliday junction DNA helicase RuvA [Dickeya zeae Ech1591] Length = 205 Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 INTLVKLPGVGKKTAERLV 125 >gi|322832435|ref|YP_004212462.1| Holliday junction DNA helicase RuvA [Rahnella sp. Y9602] gi|321167636|gb|ADW73335.1| Holliday junction DNA helicase RuvA [Rahnella sp. Y9602] Length = 204 Score = 38.7 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITALIKLPGVGKKTAERLV 125 >gi|194889514|ref|XP_001977101.1| GG18431 [Drosophila erecta] gi|190648750|gb|EDV46028.1| GG18431 [Drosophila erecta] Length = 610 Score = 38.7 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 17/31 (54%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLH 34 ++ ++ + L +IPG GP++A ++ Sbjct: 545 RMFLDQLNRNVTELKKIPGIGPKTATSLVIY 575 >gi|269126344|ref|YP_003299714.1| Holliday junction DNA helicase RuvA [Thermomonospora curvata DSM 43183] gi|268311302|gb|ACY97676.1| Holliday junction DNA helicase RuvA [Thermomonospora curvata DSM 43183] Length = 202 Score = 38.7 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L ++PG G + A+R L L Sbjct: 106 VAALTKVPGIGKKGAQRIVLEL 127 >gi|238916873|ref|YP_002930390.1| Holliday junction DNA helicase RuvA [Eubacterium eligens ATCC 27750] gi|259495642|sp|C4Z030|RUVA_EUBE2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|238872233|gb|ACR71943.1| Holliday junction DNA helicase RuvA [Eubacterium eligens ATCC 27750] Length = 207 Score = 38.7 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 3/39 (7%) Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEA 49 + + +PG GP++A++ + L +K E L++ Sbjct: 107 VAAIKALPGIGPKTAQKIIIELKDKLKLDEVFESALSKN 145 >gi|285019190|ref|YP_003376901.1| holliday junction resolvasome, DNA-binding subunit protein [Xanthomonas albilineans GPE PC73] gi|283474408|emb|CBA16909.1| putative holliday junction resolvasome, dna-binding subunit protein [Xanthomonas albilineans] Length = 194 Score = 38.7 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L RIPG G ++A R + L Sbjct: 107 VTALTRIPGIGKKTAERMVVEL 128 >gi|94971750|ref|YP_593798.1| Holliday junction DNA helicase RuvA [Candidatus Koribacter versatilis Ellin345] gi|94553800|gb|ABF43724.1| Holliday junction DNA helicase subunit RuvA [Candidatus Koribacter versatilis Ellin345] Length = 202 Score = 38.7 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L +IPG G ++A R L L Sbjct: 115 VTRLTKIPGVGKKTAERMILEL 136 >gi|149910565|ref|ZP_01899204.1| Holliday junction DNA helicase motor protein [Moritella sp. PE36] gi|149806408|gb|EDM66381.1| Holliday junction DNA helicase motor protein [Moritella sp. PE36] Length = 206 Score = 38.7 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40 I L ++PG G ++A R LV+ ++ Sbjct: 107 INSLIKLPGVGKKTAERL---LVEMRD 130 >gi|320539865|ref|ZP_08039524.1| component of RuvABC resolvasome, regulatory subunit [Serratia symbiotica str. Tucson] gi|320030051|gb|EFW12071.1| component of RuvABC resolvasome, regulatory subunit [Serratia symbiotica str. Tucson] Length = 204 Score = 38.7 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRAT 32 + +EI LI ++PG G ++A R Sbjct: 100 SAVEHEEITTLI----KLPGVGKKTAERLV 125 >gi|222142589|ref|YP_002559344.1| hypothetical protein MCCL_plsB0013 [Macrococcus caseolyticus JCSC5402] gi|222121358|dbj|BAH18691.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 711 Score = 38.7 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 8/96 (8%) Query: 84 VIIVVEDVADLWALERSKAVNAL------YHVLGGSLSPLDRIGPEDIGIQSLIERIEVK 137 + V E + + + + ++ L++ + Sbjct: 44 TWCIGHLVELAPMREYDEKYAKWNLEDLPFLPKQFKYQSKYSVKDQFNSMRKLLKGL--T 101 Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 +++ A EG+ A+Y+++ L D+ I RL Sbjct: 102 NNDQIVIATDPDREGEAIAYYVLNLLGIKDIPIKRL 137 >gi|330836553|ref|YP_004411194.1| Holliday junction ATP-dependent DNA helicase ruvA [Spirochaeta coccoides DSM 17374] gi|329748456|gb|AEC01812.1| Holliday junction ATP-dependent DNA helicase ruvA [Spirochaeta coccoides DSM 17374] Length = 209 Score = 38.7 bits (89), Expect = 0.44, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L+RIPG G ++A+R L L Sbjct: 111 VKTLSRIPGVGSKTAQRLILAL 132 >gi|329296286|ref|ZP_08253622.1| Holliday junction DNA helicase RuvA [Plautia stali symbiont] Length = 204 Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IASLVKLPGVGKKTAERLV 125 >gi|322382934|ref|ZP_08056766.1| Holliday junction DNA helicase RuvA-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153054|gb|EFX45512.1| Holliday junction DNA helicase RuvA-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 207 Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 11/15 (73%) Query: 17 LARIPGFGPRSARRA 31 L ++PG G ++A+R Sbjct: 109 LTKLPGIGKKTAQRI 123 >gi|308187172|ref|YP_003931303.1| Holliday junction ATP-dependent DNA helicase ruvA [Pantoea vagans C9-1] gi|308057682|gb|ADO09854.1| Holliday junction ATP-dependent DNA helicase ruvA [Pantoea vagans C9-1] Length = 167 Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 70 IASLVKLPGVGKKTAERLV 88 >gi|222087212|ref|YP_002545747.1| endonuclease III [Agrobacterium radiobacter K84] gi|221724660|gb|ACM27816.1| endonuclease III [Agrobacterium radiobacter K84] Length = 259 Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 33/120 (27%), Gaps = 35/120 (29%) Query: 15 KILARIPGFGPRSAR-------------------RATLHLV----KKKEQLLGPLAEAMA 51 + L +PG G ++A R L+ K +++ L + + Sbjct: 138 EELMTLPGVGRKTANVVMSMAFGHATLAVDTHVFRIANRLLLAPGKTPDEVEQRLMKVIP 197 Query: 52 NIYNKVCL-------CSICGNVDTTDPCAICIDQQRDASVII-----VVEDVADLWALER 99 + Y +C + D R I +VE + A E Sbjct: 198 DQYLYHAHHWLILHGRYVCKARKPECERCVIADLCRSPEKICDVPAPLVELPQQMIAAET 257 >gi|82524553|ref|YP_406148.1| IS1294 transposase [Shigella dysenteriae Sd197] gi|81243951|gb|ABB64660.1| IS1294 ORF [Shigella dysenteriae Sd197] Length = 430 Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 13/147 (8%) Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED-VADLWALERSKAV-NALY 107 + + C C+++ + ++D + W + + A Sbjct: 148 IFCAIHTYGRRLNCHPHVHVSVTCGCLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAW- 206 Query: 108 HVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID 167 G ++ + +SL+ + K ++ T G+ TA Y+ LK Sbjct: 207 -SEGLAMPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPP 263 Query: 168 VKITRLAY--GIPMGSELD--YLDDGT 190 + +RLA+ G G+ L YLD T Sbjct: 264 IAASRLAHYNG---GASLSFRYLDHKT 287 >gi|304396235|ref|ZP_07378117.1| Holliday junction DNA helicase RuvA [Pantoea sp. aB] gi|304356604|gb|EFM20969.1| Holliday junction DNA helicase RuvA [Pantoea sp. aB] Length = 204 Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IASLVKLPGVGKKTAERLV 125 >gi|157371017|ref|YP_001479006.1| Holliday junction DNA helicase RuvA [Serratia proteamaculans 568] gi|167012663|sp|A8GFI8|RUVA_SERP5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|157322781|gb|ABV41878.1| Holliday junction DNA helicase RuvA [Serratia proteamaculans 568] Length = 203 Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITSLVKLPGVGKKTAERLV 125 >gi|322420882|ref|YP_004200105.1| Holliday junction DNA helicase RuvA [Geobacter sp. M18] gi|320127269|gb|ADW14829.1| Holliday junction DNA helicase RuvA [Geobacter sp. M18] Length = 199 Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L+ IPG G ++A R L L Sbjct: 110 LSAIPGIGKKTAERLVLEL 128 >gi|254449000|ref|ZP_05062454.1| Holliday junction DNA helicase RuvA [gamma proteobacterium HTCC5015] gi|198261394|gb|EDY85685.1| Holliday junction DNA helicase RuvA [gamma proteobacterium HTCC5015] Length = 205 Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 6/17 (35%), Positives = 10/17 (58%) Query: 16 ILARIPGFGPRSARRAT 32 L ++PG G ++A R Sbjct: 109 ALTKLPGVGKKTAERLV 125 >gi|330683931|gb|EGG95698.1| Holliday junction DNA helicase RuvA [Staphylococcus epidermidis VCU121] Length = 200 Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNKV 57 T E++ I+ L + PG G ++AR+ L L V+ E+ L M Sbjct: 93 TPNEVKQAIENENDAYLTKFPGIGKKTARQIVLDLKGKVQITEENTDTLLNVMNESNANE 152 Query: 58 CL 59 + Sbjct: 153 SM 154 >gi|297559814|ref|YP_003678788.1| Holliday junction DNA helicase RuvA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844262|gb|ADH66282.1| Holliday junction DNA helicase RuvA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 206 Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M + + + + L R+PG G + A+R L L Sbjct: 88 MLSVHSPSSLRHAVSTEDTTALTRVPGIGKKGAQRIVLEL 127 >gi|317124983|ref|YP_004099095.1| Holliday junction DNA helicase subunit RuvA [Intrasporangium calvum DSM 43043] gi|315589071|gb|ADU48368.1| Holliday junction DNA helicase subunit RuvA [Intrasporangium calvum DSM 43043] Length = 201 Score = 38.7 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L ++PG G + A R L L Sbjct: 106 IAALTKVPGIGKKGAERLVLEL 127 >gi|154707705|ref|YP_001423840.1| Holliday junction DNA helicase RuvA [Coxiella burnetii Dugway 5J108-111] gi|189045750|sp|A9KF41|RUVA_COXBN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|154356991|gb|ABS78453.1| holliday junction DNA helicase [Coxiella burnetii Dugway 5J108-111] Length = 200 Score = 38.7 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 12/23 (52%) Query: 10 IENLIKILARIPGFGPRSARRAT 32 + I L RIPG G ++A R Sbjct: 103 LNQNIDQLVRIPGVGRKTAERLV 125 >gi|29654859|ref|NP_820551.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 493] gi|153208743|ref|ZP_01946981.1| Holliday junction DNA helicase RuvA [Coxiella burnetii 'MSU Goat Q177'] gi|161831144|ref|YP_001597405.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 331] gi|165918688|ref|ZP_02218774.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 334] gi|212219280|ref|YP_002306067.1| Holliday junction DNA helicase RuvA [Coxiella burnetii CbuK_Q154] gi|44888458|sp|Q83BE2|RUVA_COXBU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045751|sp|A9N9A2|RUVA_COXBR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698727|sp|B6J505|RUVA_COXB1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|29542128|gb|AAO91065.1| holliday junction DNA helicase [Coxiella burnetii RSA 493] gi|120575775|gb|EAX32399.1| Holliday junction DNA helicase RuvA [Coxiella burnetii 'MSU Goat Q177'] gi|161763011|gb|ABX78653.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 331] gi|165917623|gb|EDR36227.1| Holliday junction DNA helicase RuvA [Coxiella burnetii RSA 334] gi|212013542|gb|ACJ20922.1| holliday junction DNA helicase [Coxiella burnetii CbuK_Q154] Length = 200 Score = 38.7 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 12/23 (52%) Query: 10 IENLIKILARIPGFGPRSARRAT 32 + I L RIPG G ++A R Sbjct: 103 LNQNIDQLVRIPGVGRKTAERLV 125 >gi|212212080|ref|YP_002303016.1| Holliday junction DNA helicase RuvA [Coxiella burnetii CbuG_Q212] gi|226698728|sp|B6IYU3|RUVA_COXB2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|212010490|gb|ACJ17871.1| holliday junction DNA helicase [Coxiella burnetii CbuG_Q212] Length = 200 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 12/23 (52%) Query: 10 IENLIKILARIPGFGPRSARRAT 32 + I L RIPG G ++A R Sbjct: 103 LNQNIDQLVRIPGVGRKTAERLV 125 >gi|187931869|ref|YP_001891854.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. mediasiatica FSC147] gi|229560033|sp|B2SH67|RUVA_FRATM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|187712778|gb|ACD31075.1| holliday junction DNA helicase, subunit A [Francisella tularensis subsp. mediasiatica FSC147] Length = 216 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVIEIYDKLLKMANE 138 >gi|77163677|ref|YP_342202.1| DNA recombination protein, RuvA [Nitrosococcus oceani ATCC 19707] gi|254435109|ref|ZP_05048616.1| Holliday junction DNA helicase RuvA [Nitrosococcus oceani AFC27] gi|90135436|sp|Q3JES4|RUVA_NITOC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|76881991|gb|ABA56672.1| Holliday junction DNA helicase subunit RuvA [Nitrosococcus oceani ATCC 19707] gi|207088220|gb|EDZ65492.1| Holliday junction DNA helicase RuvA [Nitrosococcus oceani AFC27] Length = 199 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 4/35 (11%) Query: 16 ILARIPGFGPRSARRATLH----LVKKKEQLLGPL 46 L R+PG G ++A R + L+ E + + Sbjct: 109 SLTRLPGVGKKTAERLIVEMRDRLLDMPESGVAGM 143 >gi|330811393|ref|YP_004355855.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379501|gb|AEA70851.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 202 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++ E++ L+ L ++PG G ++A R Sbjct: 90 MSSLEVDELVRCVQSQDTSALTKVPGVGKKTAERL 124 >gi|302386617|ref|YP_003822439.1| Holliday junction DNA helicase RuvA [Clostridium saccharolyticum WM1] gi|302197245|gb|ADL04816.1| Holliday junction DNA helicase RuvA [Clostridium saccharolyticum WM1] Length = 202 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 + +E+ I K +++ PG G ++A+R L L K K L L Sbjct: 91 SALRPEELRRAIISGDAKAISKAPGVGAKTAQRIILDL-KDKIDLAEIL 138 >gi|229592301|ref|YP_002874420.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens SBW25] gi|312962759|ref|ZP_07777247.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas fluorescens WH6] gi|259495652|sp|C3JYS8|RUVA_PSEFS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229364167|emb|CAY51821.1| holliday junction helicase subunit B [Pseudomonas fluorescens SBW25] gi|311282976|gb|EFQ61569.1| Holliday junction ATP-dependent DNA helicase [Pseudomonas fluorescens WH6] Length = 203 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++ E++ L+ L ++PG G ++A R Sbjct: 90 MSSLEVDELVRAVSAQDTSALTKVPGVGKKTAERL 124 >gi|254281679|ref|ZP_04956647.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR51-B] gi|219677882|gb|EED34231.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR51-B] Length = 207 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 M + + ++ + L +PG G ++A R LV+ +++ L E + V Sbjct: 93 MDAREFSRCLQRDDVASLVALPGVGKKTAERL---LVEMRDKAGKWLGELSPEMATTVG 148 >gi|164687538|ref|ZP_02211566.1| hypothetical protein CLOBAR_01179 [Clostridium bartlettii DSM 16795] gi|164603312|gb|EDQ96777.1| hypothetical protein CLOBAR_01179 [Clostridium bartlettii DSM 16795] Length = 197 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 I L++ PG G ++A R L L K ++ + N Sbjct: 106 IAKLSKCPGVGKKTAERIILELKDKVDKESAEFEATLFN 144 >gi|70732089|ref|YP_261845.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens Pf-5] gi|90135592|sp|Q4K7D8|RUVA_PSEF5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|68346388|gb|AAY93994.1| Holliday junction DNA helicase RuvA [Pseudomonas fluorescens Pf-5] Length = 202 Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++ E++ L+ L ++PG G ++A R Sbjct: 90 MSSLEVDELVRCVQAQDTSALTKVPGVGKKTAERL 124 >gi|317121767|ref|YP_004101770.1| ATP-dependent DNA helicase RecG [Thermaerobacter marianensis DSM 12885] gi|315591747|gb|ADU51043.1| ATP-dependent DNA helicase RecG [Thermaerobacter marianensis DSM 12885] Length = 924 Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 11/16 (68%) Query: 17 LARIPGFGPRSARRAT 32 L+R+PG G R A+R Sbjct: 235 LSRLPGVGRRQAQRLA 250 >gi|188574155|ref|YP_001919141.1| transposase [Escherichia coli 53638] gi|188501330|gb|ACD54465.1| transposase [Escherichia coli 53638] Length = 422 Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T GQ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGQNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|82524545|ref|YP_406140.1| IS1294 transposase [Shigella dysenteriae Sd197] gi|309784186|ref|ZP_07678825.1| transposase [Shigella dysenteriae 1617] gi|309784439|ref|ZP_07679078.1| transposase [Shigella dysenteriae 1617] gi|81243943|gb|ABB64652.1| IS1294 ORF [Shigella dysenteriae Sd197] gi|308927693|gb|EFP73161.1| transposase [Shigella dysenteriae 1617] gi|308927946|gb|EFP73414.1| transposase [Shigella dysenteriae 1617] Length = 402 Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 13/147 (8%) Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED-VADLWALERSKAV-NALY 107 + + C C+++ + ++D + W + + A Sbjct: 148 IFCAIHTYGRRLNCHPHVHVSVTCGCLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAW- 206 Query: 108 HVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID 167 G ++ + +SL+ + K ++ T G+ TA Y+ LK Sbjct: 207 -SEGLAMPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPP 263 Query: 168 VKITRLAY--GIPMGSELD--YLDDGT 190 + +RLA+ G G+ L YLD T Sbjct: 264 IAASRLAHYNG---GASLSFRYLDHKT 287 >gi|237654483|ref|YP_002890797.1| Holliday junction DNA helicase RuvA [Thauera sp. MZ1T] gi|237625730|gb|ACR02420.1| Holliday junction DNA helicase RuvA [Thauera sp. MZ1T] Length = 200 Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L +IPG G ++A R L++ +++L L Sbjct: 110 LVKIPGIGKKTAERL---LLELRDKLGKAL 136 >gi|119896893|ref|YP_932106.1| Holliday junction DNA helicase RuvA [Azoarcus sp. BH72] gi|166230515|sp|A1K314|RUVA_AZOSB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|119669306|emb|CAL93219.1| holliday junction DNA helicase [Azoarcus sp. BH72] Length = 199 Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L +IPG G ++A R L++ +++L L Sbjct: 110 LVKIPGIGKKTAERL---LLELRDKLGKAL 136 >gi|239628227|ref|ZP_04671258.1| holliday junction DNA helicase RuvA [Clostridiales bacterium 1_7_47_FAA] gi|239518373|gb|EEQ58239.1| holliday junction DNA helicase RuvA [Clostridiales bacterium 1_7_47FAA] Length = 209 Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K LA+ PG G ++A+R L L Sbjct: 107 VKALAKAPGIGNKTAQRLILDL 128 >gi|160942099|ref|ZP_02089414.1| hypothetical protein CLOBOL_06987 [Clostridium bolteae ATCC BAA-613] gi|158434990|gb|EDP12757.1| hypothetical protein CLOBOL_06987 [Clostridium bolteae ATCC BAA-613] Length = 209 Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K LA+ PG G ++A+R L L Sbjct: 107 VKALAKAPGIGNKTAQRLILDL 128 >gi|309783752|ref|ZP_07678399.1| transposase [Shigella dysenteriae 1617] gi|308928389|gb|EFP73849.1| transposase [Shigella dysenteriae 1617] Length = 402 Score = 38.7 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 13/147 (8%) Query: 50 MANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVED-VADLWALERSKAV-NALY 107 + + C C+++ + ++D + W + + A Sbjct: 148 IFCAIHTYGRRLNCHPHVHVSVTCGCLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAW- 206 Query: 108 HVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGID 167 G ++ + +SL+ + K ++ T G+ TA Y+ LK Sbjct: 207 -SEGLAMPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPP 263 Query: 168 VKITRLAY--GIPMGSELD--YLDDGT 190 + +RLA+ G G+ L YLD T Sbjct: 264 IAASRLAHYNG---GASLSFRYLDHKT 287 >gi|222099496|ref|YP_002534064.1| Holliday junction DNA helicase [Thermotoga neapolitana DSM 4359] gi|61657322|emb|CAI44241.1| holliday junction DNA helicase [Thermotoga neapolitana] gi|221571886|gb|ACM22698.1| Holliday junction DNA helicase [Thermotoga neapolitana DSM 4359] Length = 191 Score = 38.7 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRATLHL 35 ++ ++++ LI + L++IPG ++A R + L Sbjct: 93 LSSEDVDTLISMINSQDVEGLSKIPGISRKTAERIVMEL 131 >gi|304413290|ref|ZP_07394763.1| DNA-binding subunit of Holliday junction resolvasome [Candidatus Regiella insecticola LSR1] gi|304284133|gb|EFL92526.1| DNA-binding subunit of Holliday junction resolvasome [Candidatus Regiella insecticola LSR1] Length = 202 Score = 38.3 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 4/25 (16%) Query: 8 KEIENLIKILARIPGFGPRSARRAT 32 +EI LI ++PG G ++A R Sbjct: 105 EEISTLI----KLPGVGKKTAERLV 125 >gi|145640257|ref|ZP_01795841.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae R3021] gi|145274843|gb|EDK14705.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 22.4-21] Length = 181 Score = 38.3 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRA 31 ++ ++ + I+ L +IPG G ++A R Sbjct: 91 SAMSVEQFAHAIEREELSKLTKIPGVGKKTAERL 124 >gi|224827243|ref|ZP_03700337.1| Holliday junction DNA helicase RuvA [Lutiella nitroferrum 2002] gi|224600532|gb|EEG06721.1| Holliday junction DNA helicase RuvA [Lutiella nitroferrum 2002] Length = 197 Score = 38.3 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 4/32 (12%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHL 35 + ++++ L + +PG G ++A R L L Sbjct: 101 AVASEDLKRL----SSVPGIGKKTAERLVLEL 128 >gi|117928551|ref|YP_873102.1| Holliday junction DNA helicase subunit RuvA [Acidothermus cellulolyticus 11B] gi|166229623|sp|A0LUK6|RUVA_ACIC1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|117649014|gb|ABK53116.1| Holliday junction DNA helicase subunit RuvA [Acidothermus cellulolyticus 11B] Length = 196 Score = 38.3 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K LA +PG G ++A+R L L Sbjct: 106 VKALALVPGIGRKTAQRIILEL 127 >gi|42527369|ref|NP_972467.1| Holliday junction DNA helicase RuvA [Treponema denticola ATCC 35405] gi|81411982|sp|Q73LJ9|RUVA_TREDE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|41817954|gb|AAS12378.1| Holliday junction DNA helicase RuvA [Treponema denticola ATCC 35405] Length = 201 Score = 38.3 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 2 QKKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 + +E ++ L + PG G ++A++ L L Sbjct: 90 MSGLNSSSLEKALEEGDLDTLQKAPGVGKKTAQKMILAL 128 >gi|326532252|dbj|BAK05055.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 401 Score = 38.3 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 7 GKEIENLIKILARIPGFGPRSARRATLHLVKKKE 40 +E+ +I+ L +PG GP+ A L + K + Sbjct: 280 NRELPEVIEALCTLPGVGPKVAACIALFSLDKNQ 313 >gi|302671008|ref|YP_003830968.1| holliday junction DNA helicase RuvA [Butyrivibrio proteoclasticus B316] gi|302395481|gb|ADL34386.1| holliday junction DNA helicase RuvA [Butyrivibrio proteoclasticus B316] Length = 207 Score = 38.3 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 8/47 (17%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL---VKKKEQLL 43 +T ++ I K L++ PG G ++A R TL L +K E L Sbjct: 93 MTPDDLRFAILAGDSKSLSKAPGIGKKTAERITLELRDKLKLSEDEL 139 >gi|167770542|ref|ZP_02442595.1| hypothetical protein ANACOL_01888 [Anaerotruncus colihominis DSM 17241] gi|167667137|gb|EDS11267.1| hypothetical protein ANACOL_01888 [Anaerotruncus colihominis DSM 17241] Length = 172 Score = 38.3 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 7/62 (11%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKV 57 +T ++ I K L PG GP++A+R L K L+ M+ + +++ Sbjct: 63 SDMTPDKLALCIAAGDSKSLRAAPGIGPKAAQRIILEC--KDRIGASELSGEMSEVASQL 120 Query: 58 CL 59 Sbjct: 121 RH 122 >gi|313682066|ref|YP_004059804.1| holliday junction DNA helicase subunit ruva [Sulfuricurvum kujiense DSM 16994] gi|313154926|gb|ADR33604.1| Holliday junction DNA helicase subunit RuvA [Sulfuricurvum kujiense DSM 16994] Length = 187 Score = 38.3 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 14 IKILARIPGFGPRSARRA 31 I L ++PG GP+SA R Sbjct: 105 INALKKVPGIGPKSAGRI 122 >gi|162447235|ref|YP_001620367.1| holliday junction DNA helicase RuvA [Acholeplasma laidlawii PG-8A] gi|189045740|sp|A9NF61|RUVA_ACHLI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|161985342|gb|ABX80991.1| holliday junction DNA helicase RuvA [Acholeplasma laidlawii PG-8A] Length = 186 Score = 38.3 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 17 LARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIY 54 L + PG G +SA++ L L + E + L++ ++ Sbjct: 107 LTKFPGIGMKSAQQIILDLKGKLVNDELDMQLLSDNSKDVA 147 >gi|253578705|ref|ZP_04855976.1| Holliday junction DNA helicase RuvA [Ruminococcus sp. 5_1_39B_FAA] gi|251849648|gb|EES77607.1| Holliday junction DNA helicase RuvA [Ruminococcus sp. 5_1_39BFAA] Length = 202 Score = 38.3 bits (88), Expect = 0.57, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNKVCLCSICG 64 +K L++ PG G ++A++ L L +K ++ L S Sbjct: 106 VKTLSKAPGIGKKTAQKLILELKDKMKLEDAFELKLVHEQERAAVGAGEVSDGR 159 >gi|323496589|ref|ZP_08101642.1| Holliday junction DNA helicase RuvA [Vibrio sinaloensis DSM 21326] gi|323318335|gb|EGA71293.1| Holliday junction DNA helicase RuvA [Vibrio sinaloensis DSM 21326] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|315180569|gb|ADT87483.1| Holliday junction DNA helicase motor protein [Vibrio furnissii NCTC 11218] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|312127083|ref|YP_003991957.1| helix-hairpin-helix motif protein [Caldicellulosiruptor hydrothermalis 108] gi|311777102|gb|ADQ06588.1| helix-hairpin-helix motif protein [Caldicellulosiruptor hydrothermalis 108] Length = 415 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 7/54 (12%) Query: 6 TGKEIENLI-KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54 EI + L R+PG G +SARR H + + L + + Sbjct: 310 FPIEINKASYEELIRVPGIGIKSARRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361 >gi|312882586|ref|ZP_07742326.1| Holliday junction DNA helicase RuvA [Vibrio caribbenthicus ATCC BAA-2122] gi|309369746|gb|EFP97258.1| Holliday junction DNA helicase RuvA [Vibrio caribbenthicus ATCC BAA-2122] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|269963130|ref|ZP_06177465.1| Holliday junction DNA helicase motor protein [Vibrio harveyi 1DA3] gi|269832094|gb|EEZ86218.1| Holliday junction DNA helicase motor protein [Vibrio harveyi 1DA3] Length = 223 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 126 ISTLVKLPGVGKKTAERLV 144 >gi|261252501|ref|ZP_05945074.1| holliday junction DNA helicase RuvA [Vibrio orientalis CIP 102891] gi|260935892|gb|EEX91881.1| holliday junction DNA helicase RuvA [Vibrio orientalis CIP 102891] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|260768875|ref|ZP_05877809.1| holliday junction DNA helicase RuvA [Vibrio furnissii CIP 102972] gi|260616905|gb|EEX42090.1| holliday junction DNA helicase RuvA [Vibrio furnissii CIP 102972] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|260779157|ref|ZP_05888049.1| holliday junction DNA helicase RuvA [Vibrio coralliilyticus ATCC BAA-450] gi|260605321|gb|EEX31616.1| holliday junction DNA helicase RuvA [Vibrio coralliilyticus ATCC BAA-450] Length = 224 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 126 ISTLVKLPGVGKKTAERLV 144 >gi|254506186|ref|ZP_05118330.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus 16] gi|219551004|gb|EED27985.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus 16] Length = 223 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 126 ISTLVKLPGVGKKTAERLV 144 >gi|209695355|ref|YP_002263284.1| Holliday junction DNA helicase RuvA [Aliivibrio salmonicida LFI1238] gi|226698724|sp|B6EGJ3|RUVA_ALISL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|208009307|emb|CAQ79573.1| holliday junction ATP-dependent DNA helicase RuvA [Aliivibrio salmonicida LFI1238] Length = 206 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|197335439|ref|YP_002155714.1| holliday junction DNA helicase RuvA [Vibrio fischeri MJ11] gi|226698745|sp|B5FCQ1|RUVA_VIBFM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|197316929|gb|ACH66376.1| holliday junction DNA helicase RuvA [Vibrio fischeri MJ11] Length = 207 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|163802051|ref|ZP_02195947.1| Holliday junction DNA helicase motor protein [Vibrio sp. AND4] gi|159174192|gb|EDP59000.1| Holliday junction DNA helicase motor protein [Vibrio sp. AND4] Length = 204 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|156973890|ref|YP_001444797.1| Holliday junction DNA helicase motor protein [Vibrio harveyi ATCC BAA-1116] gi|156525484|gb|ABU70570.1| hypothetical protein VIBHAR_01600 [Vibrio harveyi ATCC BAA-1116] Length = 223 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 126 ISTLVKLPGVGKKTAERLV 144 >gi|153832528|ref|ZP_01985195.1| holliday junction DNA helicase RuvA [Vibrio harveyi HY01] gi|148871323|gb|EDL70195.1| holliday junction DNA helicase RuvA [Vibrio harveyi HY01] Length = 223 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 126 ISTLVKLPGVGKKTAERLV 144 >gi|149191831|ref|ZP_01870068.1| Holliday junction DNA helicase motor protein [Vibrio shilonii AK1] gi|148834349|gb|EDL51349.1| Holliday junction DNA helicase motor protein [Vibrio shilonii AK1] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|148977429|ref|ZP_01814029.1| Holliday junction DNA helicase motor protein [Vibrionales bacterium SWAT-3] gi|145963381|gb|EDK28646.1| Holliday junction DNA helicase motor protein [Vibrionales bacterium SWAT-3] Length = 203 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|59711558|ref|YP_204334.1| Holliday junction DNA helicase motor protein [Vibrio fischeri ES114] gi|71649480|sp|Q5E6A0|RUVA_VIBF1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|59479659|gb|AAW85446.1| component of RuvABC resolvasome, regulatory subunit [Vibrio fischeri ES114] Length = 207 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|37199217|dbj|BAC95049.1| holliday junction resolvasome, DNA-binding subunit [Vibrio vulnificus YJ016] Length = 206 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 109 ISTLVKLPGVGKKTAERLV 127 >gi|27365489|ref|NP_761017.1| Holliday junction DNA helicase RuvA [Vibrio vulnificus CMCP6] gi|161486619|ref|NP_935078.2| Holliday junction DNA helicase motor protein [Vibrio vulnificus YJ016] gi|320155872|ref|YP_004188251.1| Holliday junction DNA helicase RuvA [Vibrio vulnificus MO6-24/O] gi|29611844|sp|Q8DAN4|RUVA_VIBVU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|44888369|sp|Q7MJ77|RUVA_VIBVY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|27361637|gb|AAO10544.1| Holliday junction DNA helicase RuvA [Vibrio vulnificus CMCP6] gi|319931184|gb|ADV86048.1| holliday junction DNA helicase RuvA [Vibrio vulnificus MO6-24/O] Length = 204 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|86146483|ref|ZP_01064806.1| Holliday junction DNA helicase motor protein [Vibrio sp. MED222] gi|218709101|ref|YP_002416722.1| Holliday junction DNA helicase RuvA [Vibrio splendidus LGP32] gi|254767400|sp|B7VMI3|RUVA_VIBSL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|85835746|gb|EAQ53881.1| Holliday junction DNA helicase motor protein [Vibrio sp. MED222] gi|218322120|emb|CAV18233.1| Holliday junction DNA helicase ruvA [Vibrio splendidus LGP32] Length = 203 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|84388519|ref|ZP_00991066.1| Holliday junction DNA helicase motor protein [Vibrio splendidus 12B01] gi|84377068|gb|EAP93939.1| Holliday junction DNA helicase motor protein [Vibrio splendidus 12B01] Length = 203 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLVKLPGVGKKTAERLV 125 >gi|114563352|ref|YP_750865.1| Holliday junction DNA helicase RuvA [Shewanella frigidimarina NCIMB 400] gi|122299598|sp|Q081N8|RUVA_SHEFN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|114334645|gb|ABI72027.1| Holliday junction DNA helicase RuvA [Shewanella frigidimarina NCIMB 400] Length = 205 Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 I L ++PG G ++A R ++ +++L L Sbjct: 107 IATLVKLPGVGKKTAERLV---IEMRDKLKSLL 136 >gi|182415003|ref|YP_001820069.1| Holliday junction DNA helicase RuvA [Opitutus terrae PB90-1] gi|229560110|sp|B1ZN17|RUVA_OPITP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|177842217|gb|ACB76469.1| Holliday junction DNA helicase RuvA [Opitutus terrae PB90-1] Length = 200 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Query: 2 QKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 ++ +E+ I+ LA+ PG G ++A R + L Sbjct: 91 MSRLALPSLESAIRMGDVASLAKCPGIGKKTAERLVVEL 129 >gi|307244215|ref|ZP_07526330.1| Holliday junction DNA helicase RuvA [Peptostreptococcus stomatis DSM 17678] gi|306492365|gb|EFM64403.1| Holliday junction DNA helicase RuvA [Peptostreptococcus stomatis DSM 17678] Length = 203 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 K L++ PG G ++A R L L Sbjct: 106 TKTLSKAPGVGKKTAERMVLEL 127 >gi|331016439|gb|EGH96495.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|330975328|gb|EGH75394.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|330964824|gb|EGH65084.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|330959265|gb|EGH59525.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|330872653|gb|EGH06802.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|298488209|ref|ZP_07006245.1| Holliday junction DNA helicase RuvA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157267|gb|EFH98351.1| Holliday junction DNA helicase RuvA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDASALTRIPGVGKKTAERL 124 >gi|289674670|ref|ZP_06495560.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. syringae FF5] gi|302187157|ref|ZP_07263830.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. syringae 642] gi|330950609|gb|EGH50869.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae Cit 7] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|289626496|ref|ZP_06459450.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650942|ref|ZP_06482285.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. aesculi str. 2250] gi|330868612|gb|EGH03321.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|257487010|ref|ZP_05641051.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009348|gb|EGH89404.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|237800218|ref|ZP_04588679.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023075|gb|EGI03132.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|119944489|ref|YP_942169.1| Holliday junction DNA helicase RuvA [Psychromonas ingrahamii 37] gi|166230588|sp|A1SSV5|RUVA_PSYIN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|119863093|gb|ABM02570.1| Holliday junction DNA helicase subunit RuvA [Psychromonas ingrahamii 37] Length = 207 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 12/22 (54%) Query: 11 ENLIKILARIPGFGPRSARRAT 32 + + L ++PG G ++A R Sbjct: 104 NDAVTTLVKLPGVGKKTAERLV 125 >gi|71734074|ref|YP_275913.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. phaseolicola 1448A] gi|90135568|sp|Q48FC4|RUVA_PSE14 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|71554627|gb|AAZ33838.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323052|gb|EFW79141.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. glycinea str. B076] gi|320329676|gb|EFW85665.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. glycinea str. race 4] gi|330877979|gb|EGH12128.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. glycinea str. race 4] gi|330892240|gb|EGH24901.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. mori str. 301020] gi|330988969|gb|EGH87072.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|66044657|ref|YP_234498.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. syringae B728a] gi|75502953|sp|Q4ZWL2|RUVA_PSEU2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|63255364|gb|AAY36460.1| DNA recombination protein, RuvA [Pseudomonas syringae pv. syringae B728a] gi|330968891|gb|EGH68957.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|28871123|ref|NP_793742.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato str. DC3000] gi|213969185|ref|ZP_03397324.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato T1] gi|301384820|ref|ZP_07233238.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato Max13] gi|302063526|ref|ZP_07255067.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato K40] gi|302130610|ref|ZP_07256600.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37999572|sp|Q87Y34|RUVA_PSESM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|28854373|gb|AAO57437.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato str. DC3000] gi|213926183|gb|EEB59739.1| Holliday junction DNA helicase RuvA [Pseudomonas syringae pv. tomato T1] Length = 202 Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLI--------KILARIPGFGPRSARRA 31 ++G E++ L+ L RIPG G ++A R Sbjct: 90 MSGLEVDELVRCVQAQDTSALTRIPGVGKKTAERL 124 >gi|134299518|ref|YP_001113014.1| Holliday junction DNA helicase RuvA [Desulfotomaculum reducens MI-1] gi|172044284|sp|A4J536|RUVA_DESRM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|134052218|gb|ABO50189.1| Holliday junction DNA helicase subunit RuvA [Desulfotomaculum reducens MI-1] Length = 199 Score = 38.3 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 4/34 (11%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQL 42 IE+ + L ++PG G ++A+R L++ K++L Sbjct: 101 AIED-VNQLVKVPGVGKKTAQRI---LLELKDKL 130 >gi|154249403|ref|YP_001410228.1| radical SAM domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153339|gb|ABS60571.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1] Length = 535 Score = 38.3 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Query: 9 EIENL-IKILARIPGFGPRSARRA 31 E+ L I+ L IPG G ++A R Sbjct: 486 ELNKLTIEELESIPGIGKKNALRI 509 >gi|242017549|ref|XP_002429250.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514146|gb|EEB16512.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 1151 Score = 38.3 bits (88), Expect = 0.61, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 23/167 (13%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHL-----VKKK-----EQLLGPLAEAMANIYNKV 57 ++IE L ++P +ARR HL +K+K E L + + +V Sbjct: 808 EKIEEYKNTLKKLPSINYLTARRLLCHLHFIDKLKEKNLMGAENLAAIWGPTILQVQEQV 867 Query: 58 CLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPL 117 L S C ++T + V ++ + + YH SL+ Sbjct: 868 SLGSDCFKMETLIVNNLICFYPEIFDV-----KEEEVEKEMKILKMLESYHTNSNSLNKK 922 Query: 118 DRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164 L + + + ++ +I Q TA + +L Sbjct: 923 PS--------GELKIWVYLYSHKNTDNCVNISINPQKTAEEVCKELS 961 >gi|307326761|ref|ZP_07605953.1| Holliday junction DNA helicase RuvA [Streptomyces violaceusniger Tu 4113] gi|306887524|gb|EFN18518.1| Holliday junction DNA helicase RuvA [Streptomyces violaceusniger Tu 4113] Length = 206 Score = 38.3 bits (88), Expect = 0.62, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54 K L +PG G + A+R L++ K++L PL A+ + Sbjct: 107 KALTAVPGIGKKGAQRL---LLELKDRLGEPLGSAVPSAR 143 >gi|297579365|ref|ZP_06941293.1| Holliday junction DNA helicase RuvA [Vibrio cholerae RC385] gi|297536959|gb|EFH75792.1| Holliday junction DNA helicase RuvA [Vibrio cholerae RC385] Length = 204 Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|291280036|ref|YP_003496871.1| Holliday junction DNA helicase RuvA [Deferribacter desulfuricans SSM1] gi|290754738|dbj|BAI81115.1| Holliday junction DNA helicase RuvA [Deferribacter desulfuricans SSM1] Length = 191 Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 LA IPG G ++A R L L Sbjct: 109 KLASIPGIGKKTAERIVLEL 128 >gi|153827628|ref|ZP_01980295.1| holliday junction ATP-dependent DNA helicase RuvA [Vibrio cholerae MZO-2] gi|149737900|gb|EDM52805.1| holliday junction ATP-dependent DNA helicase RuvA [Vibrio cholerae MZO-2] Length = 120 Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 23 ISTLIKLPGVGKKTAERLV 41 >gi|15641848|ref|NP_231480.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591344|ref|ZP_01678632.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 2740-80] gi|121730273|ref|ZP_01682649.1| Holliday junction DNA helicase RuvA [Vibrio cholerae V52] gi|147675231|ref|YP_001217380.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O395] gi|153824054|ref|ZP_01976721.1| Holliday junction DNA helicase RuvA [Vibrio cholerae B33] gi|227081975|ref|YP_002810526.1| Holliday junction DNA helicase RuvA [Vibrio cholerae M66-2] gi|229508057|ref|ZP_04397562.1| holliday junction DNA helicase RuvA [Vibrio cholerae BX 330286] gi|229511704|ref|ZP_04401183.1| holliday junction DNA helicase RuvA [Vibrio cholerae B33] gi|229518843|ref|ZP_04408286.1| holliday junction DNA helicase RuvA [Vibrio cholerae RC9] gi|229607618|ref|YP_002878266.1| Holliday junction DNA helicase RuvA [Vibrio cholerae MJ-1236] gi|254848932|ref|ZP_05238282.1| holliday junction DNA helicase motor protein [Vibrio cholerae MO10] gi|255745394|ref|ZP_05419343.1| holliday junction DNA helicase RuvA [Vibrio cholera CIRS 101] gi|298498115|ref|ZP_07007922.1| Holliday junction DNA helicase RuvA [Vibrio cholerae MAK 757] gi|20455267|sp|Q9KR01|RUVA_VIBCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|172047659|sp|A5F761|RUVA_VIBC3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254767399|sp|C3LNE9|RUVA_VIBCM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|9656374|gb|AAF94994.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546808|gb|EAX56974.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 2740-80] gi|121627975|gb|EAX60536.1| Holliday junction DNA helicase RuvA [Vibrio cholerae V52] gi|126518426|gb|EAZ75649.1| Holliday junction DNA helicase RuvA [Vibrio cholerae B33] gi|146317114|gb|ABQ21653.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O395] gi|227009863|gb|ACP06075.1| Holliday junction DNA helicase RuvA [Vibrio cholerae M66-2] gi|227013744|gb|ACP09954.1| Holliday junction DNA helicase RuvA [Vibrio cholerae O395] gi|229343532|gb|EEO08507.1| holliday junction DNA helicase RuvA [Vibrio cholerae RC9] gi|229351669|gb|EEO16610.1| holliday junction DNA helicase RuvA [Vibrio cholerae B33] gi|229355562|gb|EEO20483.1| holliday junction DNA helicase RuvA [Vibrio cholerae BX 330286] gi|229370273|gb|ACQ60696.1| holliday junction DNA helicase RuvA [Vibrio cholerae MJ-1236] gi|254844637|gb|EET23051.1| holliday junction DNA helicase motor protein [Vibrio cholerae MO10] gi|255737224|gb|EET92620.1| holliday junction DNA helicase RuvA [Vibrio cholera CIRS 101] gi|297542448|gb|EFH78498.1| Holliday junction DNA helicase RuvA [Vibrio cholerae MAK 757] Length = 204 Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|294141122|ref|YP_003557100.1| Holliday junction DNA helicase RuvA [Shewanella violacea DSS12] gi|293327591|dbj|BAJ02322.1| Holliday junction DNA helicase RuvA [Shewanella violacea DSS12] Length = 205 Score = 38.3 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R L++ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LIEMRDKL 132 >gi|218288865|ref|ZP_03493116.1| Holliday junction DNA helicase RuvA [Alicyclobacillus acidocaldarius LAA1] gi|218240954|gb|EED08131.1| Holliday junction DNA helicase RuvA [Alicyclobacillus acidocaldarius LAA1] Length = 208 Score = 38.3 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 ++ L+R+PG G + A R + L + L LA Sbjct: 106 VESLSRLPGIGRKLASRLVVEL----REKLDDLA 135 >gi|229515226|ref|ZP_04404686.1| holliday junction DNA helicase RuvA [Vibrio cholerae TMA 21] gi|229347931|gb|EEO12890.1| holliday junction DNA helicase RuvA [Vibrio cholerae TMA 21] Length = 204 Score = 38.3 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|153217384|ref|ZP_01951135.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 1587] gi|153830574|ref|ZP_01983241.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 623-39] gi|229520306|ref|ZP_04409732.1| holliday junction DNA helicase RuvA [Vibrio cholerae TM 11079-80] gi|229523864|ref|ZP_04413269.1| holliday junction DNA helicase RuvA [Vibrio cholerae bv. albensis VL426] gi|229529131|ref|ZP_04418521.1| holliday junction DNA helicase RuvA [Vibrio cholerae 12129(1)] gi|124113602|gb|EAY32422.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 1587] gi|148873936|gb|EDL72071.1| Holliday junction DNA helicase RuvA [Vibrio cholerae 623-39] gi|229332905|gb|EEN98391.1| holliday junction DNA helicase RuvA [Vibrio cholerae 12129(1)] gi|229337445|gb|EEO02462.1| holliday junction DNA helicase RuvA [Vibrio cholerae bv. albensis VL426] gi|229342672|gb|EEO07664.1| holliday junction DNA helicase RuvA [Vibrio cholerae TM 11079-80] gi|327484398|gb|AEA78805.1| Holliday junction DNA helicase RuvA [Vibrio cholerae LMA3894-4] Length = 204 Score = 38.3 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|262171190|ref|ZP_06038868.1| holliday junction DNA helicase RuvA [Vibrio mimicus MB-451] gi|261892266|gb|EEY38252.1| holliday junction DNA helicase RuvA [Vibrio mimicus MB-451] Length = 204 Score = 38.3 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|323702066|ref|ZP_08113734.1| Holliday junction DNA helicase RuvA [Desulfotomaculum nigrificans DSM 574] gi|323532948|gb|EGB22819.1| Holliday junction DNA helicase RuvA [Desulfotomaculum nigrificans DSM 574] Length = 199 Score = 38.3 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L ++PG G ++A+R L L Sbjct: 105 VNQLVKVPGVGKKTAQRIMLEL 126 >gi|313202065|ref|YP_004040723.1| holliday junction DNA helicase ruva [Methylovorus sp. MP688] gi|312441381|gb|ADQ85487.1| Holliday junction DNA helicase RuvA [Methylovorus sp. MP688] Length = 192 Score = 38.3 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 +L R+PG G ++A R L L K + + LA + Sbjct: 109 LLTRVPGIGKKTAERLLLEL--KDKFSVDGLAAPAGQAKSASG 149 >gi|258621408|ref|ZP_05716442.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM573] gi|258626836|ref|ZP_05721643.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM603] gi|262165955|ref|ZP_06033692.1| holliday junction DNA helicase RuvA [Vibrio mimicus VM223] gi|258580883|gb|EEW05825.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM603] gi|258586796|gb|EEW11511.1| Holliday junction DNA helicase motor protein [Vibrio mimicus VM573] gi|262025671|gb|EEY44339.1| holliday junction DNA helicase RuvA [Vibrio mimicus VM223] Length = 204 Score = 38.3 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|309811443|ref|ZP_07705229.1| Holliday junction DNA helicase RuvA [Dermacoccus sp. Ellin185] gi|308434590|gb|EFP58436.1| Holliday junction DNA helicase RuvA [Dermacoccus sp. Ellin185] Length = 201 Score = 38.3 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 ++ L ++PG G + A R L L Sbjct: 106 VRALTKVPGIGKKGAERIVLEL 127 >gi|332298112|ref|YP_004440034.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema brennaborense DSM 12168] gi|332181215|gb|AEE16903.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema brennaborense DSM 12168] Length = 205 Score = 38.3 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Query: 11 ENLIKILARIPGFGPRSARRATLHL 35 E+L L R+PG G ++A++ L L Sbjct: 105 EDL-SQLERLPGVGKKTAQKMMLTL 128 >gi|261211909|ref|ZP_05926196.1| holliday junction DNA helicase RuvA [Vibrio sp. RC341] gi|260839259|gb|EEX65891.1| holliday junction DNA helicase RuvA [Vibrio sp. RC341] Length = 204 Score = 38.3 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|192360858|ref|YP_001981526.1| Holliday junction DNA helicase RuvA [Cellvibrio japonicus Ueda107] gi|229560014|sp|B3PB58|RUVA_CELJU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|190687023|gb|ACE84701.1| Holliday junction DNA helicase RuvA [Cellvibrio japonicus Ueda107] Length = 205 Score = 38.3 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L R+PG G ++A R + L Sbjct: 107 IKALTRVPGIGQKTAERLVIEL 128 >gi|224456850|ref|ZP_03665323.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. tularensis MA00-2987] gi|254370278|ref|ZP_04986283.1| holliday junction DNA helicase [Francisella tularensis subsp. tularensis FSC033] gi|254874591|ref|ZP_05247301.1| holliday junction DNA helicase [Francisella tularensis subsp. tularensis MA00-2987] gi|90135024|sp|Q5NH17|RUVA_FRATT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|151568521|gb|EDN34175.1| holliday junction DNA helicase [Francisella tularensis subsp. tularensis FSC033] gi|254840590|gb|EET19026.1| holliday junction DNA helicase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158951|gb|ADA78342.1| holliday junction DNA helicase, subunit A [Francisella tularensis subsp. tularensis NE061598] Length = 216 Score = 38.3 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|332184195|gb|AEE26449.1| Holliday junction DNA helicase RuvA [Francisella cf. novicida 3523] Length = 216 Score = 38.3 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|294669790|ref|ZP_06734856.1| hypothetical protein NEIELOOT_01690 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308356|gb|EFE49599.1| hypothetical protein NEIELOOT_01690 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 194 Score = 38.3 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 +T E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMTADELAQAVAQEDVKRLSSAPGIGKKTAERMILEL 128 >gi|298529992|ref|ZP_07017394.1| Holliday junction DNA helicase RuvA [Desulfonatronospira thiodismutans ASO3-1] gi|298509366|gb|EFI33270.1| Holliday junction DNA helicase RuvA [Desulfonatronospira thiodismutans ASO3-1] Length = 203 Score = 38.3 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 + +I+ +I L ++PG G ++ARR L L Sbjct: 94 FSPSQIQKIINTEDEAALTQVPGIGSKTARRLILDL 129 >gi|254292161|ref|ZP_04962932.1| Holliday junction DNA helicase RuvA [Vibrio cholerae AM-19226] gi|150421924|gb|EDN13900.1| Holliday junction DNA helicase RuvA [Vibrio cholerae AM-19226] Length = 204 Score = 38.3 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|89256283|ref|YP_513645.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica LVS] gi|115314735|ref|YP_763458.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica OSU18] gi|156502349|ref|YP_001428414.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica FTNF002-00] gi|167011087|ref|ZP_02276018.1| holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica FSC200] gi|254367618|ref|ZP_04983639.1| holliday junction DNA helicase subunit A [Francisella tularensis subsp. holarctica 257] gi|254369266|ref|ZP_04985278.1| holliday junction DNA helicase [Francisella tularensis subsp. holarctica FSC022] gi|290953118|ref|ZP_06557739.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica URFT1] gi|295313646|ref|ZP_06804230.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica URFT1] gi|122325244|sp|Q0BM63|RUVA_FRATO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123094517|sp|Q2A3Q7|RUVA_FRATH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230551|sp|A7NBV5|RUVA_FRATF RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|89144114|emb|CAJ79371.1| holliday junction DNA helicase, subunit A [Francisella tularensis subsp. holarctica LVS] gi|115129634|gb|ABI82821.1| crossover junction endodeoxyribonuclease [Francisella tularensis subsp. holarctica OSU18] gi|134253429|gb|EBA52523.1| holliday junction DNA helicase subunit A [Francisella tularensis subsp. holarctica 257] gi|156252952|gb|ABU61458.1| holliday junction DNA helicase RuvA [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122216|gb|EDO66356.1| holliday junction DNA helicase [Francisella tularensis subsp. holarctica FSC022] Length = 216 Score = 38.3 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|284929265|ref|YP_003421787.1| Holliday junction DNA helicase subunit RuvA [cyanobacterium UCYN-A] gi|284809709|gb|ADB95406.1| Holliday junction DNA helicase, RuvA subunit [cyanobacterium UCYN-A] Length = 213 Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 13/72 (18%) Query: 11 ENLIKI--------LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 E LIK L+ PG G ++A R L L L L EA I ++ C+ Sbjct: 102 EKLIKAVCSGNVKMLSESPGVGKKTAERIILEL----NSKLLKLIEAF-EIKVELHSCNS 156 Query: 63 CGNVDTTDPCAI 74 N ++ Sbjct: 157 SENTLEDITSSL 168 >gi|330721244|gb|EGG99343.1| Holliday junction DNA helicase RuvA [gamma proteobacterium IMCC2047] Length = 197 Score = 37.9 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 + L ++PG G ++A R ++ +++L Sbjct: 107 VAALTKVPGIGKKTAERLV---IEMRDKL 132 >gi|291165807|gb|EFE27855.1| holliday junction DNA helicase RuvA [Filifactor alocis ATCC 35896] Length = 198 Score = 37.9 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I+ L+++ G G ++A R L L Sbjct: 106 IEKLSKVSGVGKKTAERIVLEL 127 >gi|218244912|ref|YP_002370283.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8801] gi|257057937|ref|YP_003135825.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8802] gi|226725438|sp|B7JZG7|RUVA_CYAP8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|218165390|gb|ACK64127.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8801] gi|256588103|gb|ACU98989.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 8802] Length = 210 Score = 37.9 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 +E L++ L++ PG G ++A R L L Sbjct: 101 LEELVQAIVNGNIRTLSQTPGVGQKTAERIALEL 134 >gi|262404190|ref|ZP_06080745.1| holliday junction DNA helicase RuvA [Vibrio sp. RC586] gi|262349222|gb|EEY98360.1| holliday junction DNA helicase RuvA [Vibrio sp. RC586] Length = 204 Score = 37.9 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ISTLIKLPGVGKKTAERLV 125 >gi|255325096|ref|ZP_05366202.1| holliday junction DNA helicase RuvA [Corynebacterium tuberculostearicum SK141] gi|255297661|gb|EET76972.1| holliday junction DNA helicase RuvA [Corynebacterium tuberculostearicum SK141] Length = 205 Score = 37.9 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L IPG G R A+R L L Sbjct: 106 VKALQSIPGVGKRMAQRLALEL 127 >gi|311739557|ref|ZP_07713392.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium pseudogenitalium ATCC 33035] gi|311305373|gb|EFQ81441.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium pseudogenitalium ATCC 33035] Length = 205 Score = 37.9 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L IPG G R A+R L L Sbjct: 106 VKALQSIPGVGKRMAQRLALEL 127 >gi|282855630|ref|ZP_06264944.1| holliday junction ATP-dependent DNA helicase RuvA [Pyramidobacter piscolens W5455] gi|282586560|gb|EFB91814.1| holliday junction ATP-dependent DNA helicase RuvA [Pyramidobacter piscolens W5455] Length = 203 Score = 37.9 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I++L +PG G ++A R L Sbjct: 106 IRLLTSVPGIGKKTAERICFEL 127 >gi|227495489|ref|ZP_03925805.1| possible crossover junction endodeoxyribonuclease [Actinomyces coleocanis DSM 15436] gi|226831036|gb|EEH63419.1| possible crossover junction endodeoxyribonuclease [Actinomyces coleocanis DSM 15436] Length = 195 Score = 37.9 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRA 31 + +T E+ + K L RIPG G +SA+R Sbjct: 90 EALTPDELRQAVISSDEKTLQRIPGIGKKSAQRM 123 >gi|208779418|ref|ZP_03246764.1| holliday junction DNA helicase RuvA [Francisella novicida FTG] gi|254372980|ref|ZP_04988469.1| hypothetical protein FTCG_00553 [Francisella tularensis subsp. novicida GA99-3549] gi|151570707|gb|EDN36361.1| hypothetical protein FTCG_00553 [Francisella novicida GA99-3549] gi|208745218|gb|EDZ91516.1| holliday junction DNA helicase RuvA [Francisella novicida FTG] gi|332678321|gb|AEE87450.1| Holliday junction DNA helicase RuvA [Francisella cf. novicida Fx1] Length = 216 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|118497616|ref|YP_898666.1| holliday junction DNA helicase, subunit A [Francisella tularensis subsp. novicida U112] gi|195536317|ref|ZP_03079324.1| holliday junction DNA helicase RuvA [Francisella tularensis subsp. novicida FTE] gi|166230552|sp|A0Q6P7|RUVA_FRATN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|118423522|gb|ABK89912.1| holliday junction DNA helicase, subunit A [Francisella novicida U112] gi|194372794|gb|EDX27505.1| holliday junction DNA helicase RuvA [Francisella tularensis subsp. novicida FTE] Length = 216 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|71279553|ref|YP_268842.1| Holliday junction DNA helicase RuvA [Colwellia psychrerythraea 34H] gi|90134812|sp|Q483C5|RUVA_COLP3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|71145293|gb|AAZ25766.1| Holliday junction DNA helicase RuvA [Colwellia psychrerythraea 34H] Length = 211 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 I + +IPG G ++A R L++ +++L A+ + + Sbjct: 107 ISAIVKIPGVGKKTAERL---LIEMRDRLKDWQAQQIHLV 143 >gi|332290325|ref|YP_004421177.1| Holliday junction DNA helicase RuvA [Gallibacterium anatis UMN179] gi|330433221|gb|AEC18280.1| Holliday junction DNA helicase RuvA [Gallibacterium anatis UMN179] Length = 202 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRATLHL 35 M IE + L+++ PG G ++A R + L Sbjct: 93 MSVSEFSYAIER--EELSKLVKIPGVGKKTAERLIVEL 128 >gi|212635161|ref|YP_002311686.1| Holliday junction DNA helicase RuvA [Shewanella piezotolerans WP3] gi|226725447|sp|B8CNY0|RUVA_SHEPW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|212556645|gb|ACJ29099.1| DNA recombination protein, RuvA [Shewanella piezotolerans WP3] Length = 205 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|218961233|ref|YP_001741008.1| Holliday junction DNA helicase RuvA [Candidatus Cloacamonas acidaminovorans] gi|167729890|emb|CAO80802.1| Holliday junction DNA helicase RuvA [Candidatus Cloacamonas acidaminovorans] Length = 202 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 4/37 (10%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 +L R+PG G +SA+R + L + + L + Sbjct: 112 LLTRVPGIGKKSAQRLIVEL----KDDVHKLLNHIDQ 144 >gi|56707779|ref|YP_169675.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. tularensis SCHU S4] gi|110670250|ref|YP_666807.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. tularensis FSC198] gi|56604271|emb|CAG45291.1| holliday junction DNA helicase, subunit A [Francisella tularensis subsp. tularensis SCHU S4] gi|110320583|emb|CAL08674.1| holliday junction DNA helicase, subunit A [Francisella tularensis subsp. tularensis FSC198] Length = 217 Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 94 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 139 >gi|260772519|ref|ZP_05881435.1| holliday junction DNA helicase RuvA [Vibrio metschnikovii CIP 69.14] gi|260611658|gb|EEX36861.1| holliday junction DNA helicase RuvA [Vibrio metschnikovii CIP 69.14] Length = 205 Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40 I L ++PG G ++A R LV+ K+ Sbjct: 107 ISTLIKLPGVGKKTAERL---LVEMKD 130 >gi|255533713|ref|YP_003094085.1| Holliday junction DNA helicase RuvA [Pedobacter heparinus DSM 2366] gi|255346697|gb|ACU06023.1| Holliday junction DNA helicase RuvA [Pedobacter heparinus DSM 2366] Length = 194 Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 M IT EI+ I ++ RI G G +SA+R L L Sbjct: 88 MLSSITPVEIQTAIVNADLALIQRIKGIGAKSAQRLVLEL 127 >gi|170726918|ref|YP_001760944.1| Holliday junction DNA helicase RuvA [Shewanella woodyi ATCC 51908] gi|229560127|sp|B1KGY0|RUVA_SHEWM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|169812265|gb|ACA86849.1| Holliday junction DNA helicase RuvA [Shewanella woodyi ATCC 51908] Length = 205 Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 I L ++PG G ++A R LV+ +++L L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKLKSLL 136 >gi|56477680|ref|YP_159269.1| Holliday junction DNA helicase RuvA [Aromatoleum aromaticum EbN1] gi|81357290|sp|Q5P2U6|RUVA_AZOSE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|56313723|emb|CAI08368.1| Holliday junction DNA helicase [Aromatoleum aromaticum EbN1] Length = 199 Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L +IPG G ++A R L++ +++L L Sbjct: 110 LVKIPGIGKKTAERL---LLELRDKLGRAL 136 >gi|225572217|ref|ZP_03781081.1| hypothetical protein RUMHYD_00511 [Blautia hydrogenotrophica DSM 10507] gi|225040279|gb|EEG50525.1| hypothetical protein RUMHYD_00511 [Blautia hydrogenotrophica DSM 10507] Length = 201 Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK +++ PG G ++A++ L L Sbjct: 107 IKTISKAPGIGRKTAQKLVLEL 128 >gi|127513004|ref|YP_001094201.1| Holliday junction DNA helicase RuvA [Shewanella loihica PV-4] gi|166200262|sp|A3QEP4|RUVA_SHELP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|126638299|gb|ABO23942.1| Holliday junction DNA helicase RuvA [Shewanella loihica PV-4] Length = 205 Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|326791465|ref|YP_004309286.1| Holliday junction DNA helicase RuvA [Clostridium lentocellum DSM 5427] gi|326542229|gb|ADZ84088.1| Holliday junction DNA helicase RuvA [Clostridium lentocellum DSM 5427] Length = 197 Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 + +E+ +I K L+++ G GP++A+R L L Sbjct: 91 NTYSSQEVIEIILNQDSKALSKVSGIGPKTAQRIILEL 128 >gi|254374431|ref|ZP_04989913.1| holliday junction DNA helicase RuvA [Francisella novicida GA99-3548] gi|151572151|gb|EDN37805.1| holliday junction DNA helicase RuvA [Francisella novicida GA99-3548] Length = 216 Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|134302038|ref|YP_001122007.1| Holliday junction DNA helicase RuvA [Francisella tularensis subsp. tularensis WY96-3418] gi|166230553|sp|A4IY85|RUVA_FRATW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|134049815|gb|ABO46886.1| holliday junction DNA helicase RuvA [Francisella tularensis subsp. tularensis WY96-3418] Length = 216 Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATL----HLVKKKEQ 41 + K + + I+ +LA +PG G ++A R + L+K + Sbjct: 93 MDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANE 138 >gi|307105926|gb|EFN54173.1| hypothetical protein CHLNCDRAFT_16754 [Chlorella variabilis] Length = 291 Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKE 40 E ++ L +PG GP+ A L + K E Sbjct: 203 PYEEAVEELCTLPGIGPKVAACIALFSLDKHE 234 >gi|323706513|ref|ZP_08118072.1| Holliday junction DNA helicase RuvA [Thermoanaerobacterium xylanolyticum LX-11] gi|323534143|gb|EGB23935.1| Holliday junction DNA helicase RuvA [Thermoanaerobacterium xylanolyticum LX-11] Length = 186 Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 4/49 (8%) Query: 15 KILARIPGFGPRSARRATLHLVKK----KEQLLGPLAEAMANIYNKVCL 59 K + + PG G ++A+R L L K + L L+ + + + Sbjct: 108 KAIEKSPGIGKKTAQRIILELKDKLTFAHDVKLDDLSNDVVDALLSLGY 156 >gi|269138790|ref|YP_003295491.1| holliday junction resolvasome, DNA-binding subunit [Edwardsiella tarda EIB202] gi|267984451|gb|ACY84280.1| holliday junction resolvasome, DNA-binding subunit [Edwardsiella tarda EIB202] gi|304558782|gb|ADM41446.1| Holliday junction DNA helicase RuvA [Edwardsiella tarda FL6-60] Length = 202 Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VAALVKLPGVGKKTAERLV 125 >gi|238919502|ref|YP_002933017.1| Holliday junction DNA helicase RuvA [Edwardsiella ictaluri 93-146] gi|238869071|gb|ACR68782.1| holliday junction DNA helicase RuvA, putative [Edwardsiella ictaluri 93-146] Length = 204 Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 109 VAALVKLPGVGKKTAERLV 127 >gi|254516709|ref|ZP_05128768.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR5-3] gi|219675132|gb|EED31499.1| Holliday junction DNA helicase RuvA [gamma proteobacterium NOR5-3] Length = 203 Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKE 40 + ++ L +PG G ++A R L++ ++ Sbjct: 93 MDSDSFARAVQADDLTALVALPGVGKKTAERL---LIEMRD 130 >gi|239637553|ref|ZP_04678525.1| holliday junction DNA helicase RuvA [Staphylococcus warneri L37603] gi|239596771|gb|EEQ79296.1| holliday junction DNA helicase RuvA [Staphylococcus warneri L37603] Length = 200 Score = 37.9 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 8/62 (12%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL---VKKKEQLLGPLAEAMANIYNKV 57 T E++ I+ L + PG G ++AR+ L L V+ E+ L M + Sbjct: 93 TPNEVKQAIENENDTYLTKFPGIGKKTARQIVLDLKGKVQITEENSDTLLNVMNDSNANE 152 Query: 58 CL 59 + Sbjct: 153 SM 154 >gi|154249486|ref|YP_001410311.1| Holliday junction DNA helicase RuvA [Fervidobacterium nodosum Rt17-B1] gi|171769439|sp|A7HL71|RUVA_FERNB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|154153422|gb|ABS60654.1| Holliday junction DNA helicase RuvA [Fervidobacterium nodosum Rt17-B1] Length = 188 Score = 37.9 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 14 IKILARIPGFGPRSARRA 31 ++ L+ IPG G ++A R Sbjct: 106 VEKLSSIPGIGRKTAERM 123 >gi|297539687|ref|YP_003675456.1| Holliday junction DNA helicase RuvA [Methylotenera sp. 301] gi|297259034|gb|ADI30879.1| Holliday junction DNA helicase RuvA [Methylotenera sp. 301] Length = 192 Score = 37.9 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 9 EIENLIKI--------LARIPGFGPRSARRATLHL 35 I++L++ L R+PG G ++A R L L Sbjct: 94 SIDDLVQAVAMQDTAMLTRVPGVGKKTAERLLLEL 128 >gi|332829079|gb|EGK01743.1| hypothetical protein HMPREF9455_01891 [Dysgonomonas gadei ATCC BAA-286] Length = 234 Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 5/37 (13%) Query: 146 ISATIEGQT----TAHYIMDKLKGIDVKITRLAYGIP 178 I+ T EG T +YI + L ++ ++R+A G+P Sbjct: 97 IAVTAEGDAGFYSTIYYISEYLTQENIPVSRIA-GVP 132 >gi|317402225|gb|EFV82814.1| Holliday junction DNA helicase [Achromobacter xylosoxidans C54] Length = 190 Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 L R+PG G ++A R L++ + +L + +++ Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGATAHAVHDNQS 148 >gi|238021644|ref|ZP_04602070.1| hypothetical protein GCWU000324_01546 [Kingella oralis ATCC 51147] gi|237866258|gb|EEP67300.1| hypothetical protein GCWU000324_01546 [Kingella oralis ATCC 51147] Length = 195 Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L+ PG G ++A R L L Sbjct: 107 IKRLSAAPGIGKKTAERMILEL 128 >gi|296132699|ref|YP_003639946.1| Holliday junction DNA helicase RuvA [Thermincola sp. JR] gi|296031277|gb|ADG82045.1| Holliday junction DNA helicase RuvA [Thermincola potens JR] Length = 200 Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + +L ++PG G ++A+R L L Sbjct: 108 VGVLTQVPGIGKKTAQRMILEL 129 >gi|242065370|ref|XP_002453974.1| hypothetical protein SORBIDRAFT_04g022540 [Sorghum bicolor] gi|241933805|gb|EES06950.1| hypothetical protein SORBIDRAFT_04g022540 [Sorghum bicolor] Length = 413 Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%) Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKK 39 KE+ +I+ L +PG GP+ A L + + Sbjct: 293 KELSYVIEALCTLPGVGPKVAACIALFSLDQN 324 >gi|320537837|ref|ZP_08037755.1| Holliday junction DNA helicase RuvA [Treponema phagedenis F0421] gi|320145314|gb|EFW37012.1| Holliday junction DNA helicase RuvA [Treponema phagedenis F0421] Length = 203 Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + +L IPG G ++A++ L L Sbjct: 107 VHLLQTIPGVGKKTAQKMVLAL 128 >gi|317491787|ref|ZP_07950222.1| Holliday junction DNA helicase RuvA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920221|gb|EFV41545.1| Holliday junction DNA helicase RuvA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 204 Score = 37.9 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRAT 32 M + IE + L ++PG G ++A R Sbjct: 93 MSAQQFVTAIEREEVSTLVKLPGVGKKTAERLV 125 >gi|307299266|ref|ZP_07579067.1| Holliday junction DNA helicase RuvA [Thermotogales bacterium mesG1.Ag.4.2] gi|306915062|gb|EFN45448.1| Holliday junction DNA helicase RuvA [Thermotogales bacterium mesG1.Ag.4.2] Length = 197 Score = 37.9 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 L+ +PG G ++A R + L Sbjct: 109 ELSSLPGIGKKTAERMIVEL 128 >gi|295091401|emb|CBK77508.1| Holliday junction DNA helicase subunit RuvA [Clostridium cf. saccharolyticum K10] Length = 248 Score = 37.9 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K ++R PG G ++A+R L L Sbjct: 148 VKAISRAPGIGAKTAQRIILDL 169 >gi|331663357|ref|ZP_08364267.1| holliday junction DNA helicase RuvA [Escherichia coli TA143] gi|331059156|gb|EGI31133.1| holliday junction DNA helicase RuvA [Escherichia coli TA143] Length = 188 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 78 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 115 >gi|326622940|gb|EGE29285.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 187 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 77 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 114 >gi|301645623|ref|ZP_07245552.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 146-1] gi|301076155|gb|EFK90961.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 146-1] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|300951483|ref|ZP_07165318.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 116-1] gi|300956626|ref|ZP_07168905.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 175-1] gi|300316608|gb|EFJ66392.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 175-1] gi|300449233|gb|EFK12853.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 116-1] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|296101800|ref|YP_003611946.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056259|gb|ADF60997.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 204 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 130 >gi|294635834|ref|ZP_06714289.1| holliday junction DNA helicase RuvA [Edwardsiella tarda ATCC 23685] gi|291090806|gb|EFE23367.1| holliday junction DNA helicase RuvA [Edwardsiella tarda ATCC 23685] Length = 195 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 100 VAALIKLPGVGKKTAERLV 118 >gi|283832740|ref|ZP_06352481.1| holliday junction DNA helicase RuvA [Citrobacter youngae ATCC 29220] gi|291072423|gb|EFE10532.1| holliday junction DNA helicase RuvA [Citrobacter youngae ATCC 29220] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|283785600|ref|YP_003365465.1| holliday junction ATP-dependent DNA helicase [Citrobacter rodentium ICC168] gi|282949054|emb|CBG88657.1| holliday junction ATP-dependent DNA helicase [Citrobacter rodentium ICC168] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 130 >gi|281601276|gb|ADA74260.1| Holliday junction ATP-dependent DNA helicase ruvA [Shigella flexneri 2002017] gi|332766837|gb|EGJ97038.1| holliday junction DNA helicase RuvA [Shigella flexneri 2930-71] Length = 187 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 77 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 114 >gi|253997451|ref|YP_003049515.1| Holliday junction DNA helicase RuvA [Methylotenera mobilis JLW8] gi|253984130|gb|ACT48988.1| Holliday junction DNA helicase RuvA [Methylotenera mobilis JLW8] Length = 192 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 8/35 (22%) Query: 9 EIENLIKI--------LARIPGFGPRSARRATLHL 35 I++L++ L R+PG G ++A R L L Sbjct: 94 SIDDLVQAVALQEPSMLTRVPGVGKKTAERLLLEL 128 >gi|218548578|ref|YP_002382369.1| Holliday junction DNA helicase RuvA [Escherichia fergusonii ATCC 35469] gi|226725445|sp|B7LPI3|RUVA_ESCF3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|218356119|emb|CAQ88736.1| component of RuvABC resolvasome, regulatory subunit [Escherichia fergusonii ATCC 35469] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|213649641|ref|ZP_03379694.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|213163229|ref|ZP_03348939.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 174 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 64 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 101 >gi|194439064|ref|ZP_03071147.1| Holliday junction DNA helicase RuvA [Escherichia coli 101-1] gi|253773182|ref|YP_003036013.1| Holliday junction DNA helicase RuvA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161921|ref|YP_003045029.1| Holliday junction DNA helicase RuvA [Escherichia coli B str. REL606] gi|300928892|ref|ZP_07144397.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 187-1] gi|194422023|gb|EDX38027.1| Holliday junction DNA helicase RuvA [Escherichia coli 101-1] gi|242377582|emb|CAQ32337.1| branch migration of Holliday structures; repair, subunit of resolvasome [Escherichia coli BL21(DE3)] gi|253324226|gb|ACT28828.1| Holliday junction DNA helicase RuvA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973822|gb|ACT39493.1| Holliday junction DNA helicase motor protein [Escherichia coli B str. REL606] gi|253978016|gb|ACT43686.1| Holliday junction DNA helicase motor protein [Escherichia coli BL21(DE3)] gi|300463120|gb|EFK26613.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 187-1] gi|323961916|gb|EGB57515.1| Holliday junction DNA helicase RuvA [Escherichia coli H489] gi|323972631|gb|EGB67834.1| Holliday junction DNA helicase RuvA [Escherichia coli TA007] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|194433948|ref|ZP_03066220.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae 1012] gi|194417820|gb|EDX33917.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae 1012] gi|332095232|gb|EGJ00259.1| holliday junction DNA helicase RuvA [Shigella dysenteriae 155-74] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|191168085|ref|ZP_03029884.1| Holliday junction DNA helicase RuvA [Escherichia coli B7A] gi|256017935|ref|ZP_05431800.1| Holliday junction DNA helicase RuvA [Shigella sp. D9] gi|260855801|ref|YP_003229692.1| component of RuvABC resolvasome, regulatory subunit RuvA [Escherichia coli O26:H11 str. 11368] gi|260868396|ref|YP_003234798.1| component of RuvABC resolvasome, regulatory subunit RuvA [Escherichia coli O111:H- str. 11128] gi|300816247|ref|ZP_07096469.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 107-1] gi|300924950|ref|ZP_07140877.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 182-1] gi|301327650|ref|ZP_07220858.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 78-1] gi|307314227|ref|ZP_07593837.1| Holliday junction DNA helicase RuvA [Escherichia coli W] gi|309794242|ref|ZP_07688666.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 145-7] gi|332278969|ref|ZP_08391382.1| holliday junction helicase subunit B [Shigella sp. D9] gi|190901883|gb|EDV61633.1| Holliday junction DNA helicase RuvA [Escherichia coli B7A] gi|257754450|dbj|BAI25952.1| component of RuvABC resolvasome, regulatory subunit RuvA [Escherichia coli O26:H11 str. 11368] gi|257764752|dbj|BAI36247.1| component of RuvABC resolvasome, regulatory subunit RuvA [Escherichia coli O111:H- str. 11128] gi|300418886|gb|EFK02197.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 182-1] gi|300530937|gb|EFK51999.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 107-1] gi|300845798|gb|EFK73558.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 78-1] gi|306906196|gb|EFN36714.1| Holliday junction DNA helicase RuvA [Escherichia coli W] gi|308122147|gb|EFO59409.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 145-7] gi|315061167|gb|ADT75494.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli W] gi|320198055|gb|EFW72663.1| Holliday junction DNA helicase RuvA [Escherichia coli EC4100B] gi|323152650|gb|EFZ38926.1| holliday junction DNA helicase RuvA [Escherichia coli EPECa14] gi|323180658|gb|EFZ66203.1| holliday junction DNA helicase RuvA [Escherichia coli 1180] gi|323378256|gb|ADX50524.1| Holliday junction DNA helicase RuvA [Escherichia coli KO11] gi|324113597|gb|EGC07572.1| Holliday junction DNA helicase RuvA [Escherichia fergusonii B253] gi|324118921|gb|EGC12810.1| Holliday junction DNA helicase RuvA [Escherichia coli E1167] gi|332101321|gb|EGJ04667.1| holliday junction helicase subunit B [Shigella sp. D9] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|170769415|ref|ZP_02903868.1| Holliday junction DNA helicase RuvA [Escherichia albertii TW07627] gi|170121739|gb|EDS90670.1| Holliday junction DNA helicase RuvA [Escherichia albertii TW07627] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERL---IVEMKD 130 >gi|168238525|ref|ZP_02663583.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736016|ref|YP_002114930.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204930984|ref|ZP_03221810.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|229560126|sp|B4TYR8|RUVA_SALSV RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|194711518|gb|ACF90739.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288628|gb|EDY28003.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204320028|gb|EDZ05233.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322616895|gb|EFY13803.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618133|gb|EFY15025.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625804|gb|EFY22623.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626256|gb|EFY23066.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632670|gb|EFY29415.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639014|gb|EFY35707.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640454|gb|EFY37107.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644219|gb|EFY40764.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649542|gb|EFY45974.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655449|gb|EFY51757.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660228|gb|EFY56466.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662909|gb|EFY59116.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668094|gb|EFY64253.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674146|gb|EFY70240.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675500|gb|EFY71574.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683086|gb|EFY79102.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686780|gb|EFY82758.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195329|gb|EFZ80509.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199221|gb|EFZ84316.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204054|gb|EFZ89069.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207477|gb|EFZ92425.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210663|gb|EFZ95541.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217461|gb|EGA02180.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221952|gb|EGA06342.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224438|gb|EGA08726.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231483|gb|EGA15596.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235925|gb|EGA20004.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240495|gb|EGA24538.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245387|gb|EGA29387.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247807|gb|EGA31745.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253606|gb|EGA37434.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255035|gb|EGA38823.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260268|gb|EGA43889.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266859|gb|EGA50345.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269065|gb|EGA52521.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|167552471|ref|ZP_02346224.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322886|gb|EDZ10725.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|161502989|ref|YP_001570101.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864336|gb|ABX20959.1| hypothetical protein SARI_01051 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 228 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 118 MSAQQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 155 >gi|157145359|ref|YP_001452679.1| Holliday junction DNA helicase RuvA [Citrobacter koseri ATCC BAA-895] gi|166230539|sp|A8AFI0|RUVA_CITK8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|157082564|gb|ABV12242.1| hypothetical protein CKO_01099 [Citrobacter koseri ATCC BAA-895] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEPAALVKLPGIGKKTAERL---IVEMKD 130 >gi|157161330|ref|YP_001458648.1| Holliday junction DNA helicase RuvA [Escherichia coli HS] gi|170019794|ref|YP_001724748.1| Holliday junction DNA helicase RuvA [Escherichia coli ATCC 8739] gi|188494515|ref|ZP_03001785.1| Holliday junction DNA helicase RuvA [Escherichia coli 53638] gi|193069860|ref|ZP_03050809.1| Holliday junction DNA helicase RuvA [Escherichia coli E110019] gi|167012659|sp|A8A161|RUVA_ECOHS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045753|sp|B1J0M7|RUVA_ECOLC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|157067010|gb|ABV06265.1| Holliday junction DNA helicase RuvA [Escherichia coli HS] gi|169754722|gb|ACA77421.1| Holliday junction DNA helicase RuvA [Escherichia coli ATCC 8739] gi|188489714|gb|EDU64817.1| Holliday junction DNA helicase RuvA [Escherichia coli 53638] gi|192956760|gb|EDV87214.1| Holliday junction DNA helicase RuvA [Escherichia coli E110019] gi|309702085|emb|CBJ01399.1| holliday junction ATP-dependent DNA helicase [Escherichia coli ETEC H10407] gi|323937119|gb|EGB33399.1| Holliday junction DNA helicase RuvA [Escherichia coli E1520] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|157962184|ref|YP_001502218.1| Holliday junction DNA helicase RuvA [Shewanella pealeana ATCC 700345] gi|189045771|sp|A8H546|RUVA_SHEPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|157847184|gb|ABV87683.1| Holliday junction DNA helicase RuvA [Shewanella pealeana ATCC 700345] Length = 205 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|323186363|gb|EFZ71713.1| holliday junction DNA helicase RuvA [Escherichia coli 1357] Length = 187 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 77 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 114 >gi|30063272|ref|NP_837443.1| Holliday junction DNA helicase RuvA [Shigella flexneri 2a str. 2457T] gi|30041524|gb|AAP17252.1| Holliday junction helicase subunit B [Shigella flexneri 2a str. 2457T] gi|313650643|gb|EFS15045.1| holliday junction DNA helicase RuvA [Shigella flexneri 2a str. 2457T] gi|332757632|gb|EGJ87965.1| holliday junction DNA helicase RuvA [Shigella flexneri 2747-71] gi|332758049|gb|EGJ88375.1| holliday junction DNA helicase RuvA [Shigella flexneri K-671] gi|333004779|gb|EGK24301.1| holliday junction DNA helicase RuvA [Shigella flexneri K-218] gi|333018630|gb|EGK37924.1| holliday junction DNA helicase RuvA [Shigella flexneri K-304] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|82776447|ref|YP_402796.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae Sd197] gi|309789257|ref|ZP_07683850.1| holliday junction DNA helicase RuvA [Shigella dysenteriae 1617] gi|90135814|sp|Q32HA0|RUVA_SHIDS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|81240595|gb|ABB61305.1| Holliday junction helicase subunit B [Shigella dysenteriae Sd197] gi|308923011|gb|EFP68525.1| holliday junction DNA helicase RuvA [Shigella dysenteriae 1617] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|74311809|ref|YP_310228.1| Holliday junction DNA helicase RuvA [Shigella sonnei Ss046] gi|90135833|sp|Q3Z2L9|RUVA_SHISS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|73855286|gb|AAZ87993.1| Holliday junction helicase subunit B [Shigella sonnei Ss046] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|62180473|ref|YP_216890.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613551|ref|YP_001587516.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224583600|ref|YP_002637398.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|75482773|sp|Q57NA2|RUVA_SALCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045767|sp|A9MUX3|RUVA_SALPB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254767385|sp|C0Q2F4|RUVA_SALPC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|62128106|gb|AAX65809.1| Holliday junction helicase subunit A [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362915|gb|ABX66683.1| hypothetical protein SPAB_01271 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224468127|gb|ACN45957.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322714948|gb|EFZ06519.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|16760845|ref|NP_456462.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765237|ref|NP_460852.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141463|ref|NP_804805.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413186|ref|YP_150261.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167994196|ref|ZP_02575288.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234044|ref|ZP_02659102.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168241523|ref|ZP_02666455.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259832|ref|ZP_02681805.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462574|ref|ZP_02696505.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820718|ref|ZP_02832718.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446097|ref|YP_002041160.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451798|ref|YP_002045948.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471309|ref|ZP_03077293.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197247981|ref|YP_002146128.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263523|ref|ZP_03163597.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362112|ref|YP_002141749.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242475|ref|YP_002215191.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389612|ref|ZP_03216223.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205352399|ref|YP_002226200.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856584|ref|YP_002243235.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213426405|ref|ZP_03359155.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580455|ref|ZP_03362281.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609154|ref|ZP_03368980.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213859991|ref|ZP_03385695.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238912045|ref|ZP_04655882.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824023|ref|ZP_06543621.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54039573|sp|P66747|RUVA_SALTI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|54042202|sp|P66746|RUVA_SALTY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|81361945|sp|Q5PN01|RUVA_SALPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698738|sp|B5F3J6|RUVA_SALA4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698739|sp|B5FSN7|RUVA_SALDC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698740|sp|B5R1V8|RUVA_SALEP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698741|sp|B5R8E2|RUVA_SALG2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560123|sp|B4T7Z3|RUVA_SALHS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560124|sp|B4SVE5|RUVA_SALNS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560125|sp|B5BH60|RUVA_SALPK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|25299990|pir||AC0743 Holliday junction DNA helicase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420431|gb|AAL20811.1| Holliday junction helicase subunit A [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503142|emb|CAD05646.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137090|gb|AAO68654.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127443|gb|AAV76949.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194404760|gb|ACF64982.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410102|gb|ACF70321.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457673|gb|EDX46512.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195634327|gb|EDX52679.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093589|emb|CAR59052.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211684|gb|ACH49081.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241778|gb|EDY24398.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936991|gb|ACH74324.1| holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602057|gb|EDZ00603.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205272180|emb|CAR37038.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205327892|gb|EDZ14656.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331994|gb|EDZ18758.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339435|gb|EDZ26199.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342743|gb|EDZ29507.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350710|gb|EDZ37341.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708387|emb|CAR32691.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247066|emb|CBG24885.1| Holliday junction DNA helicase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993877|gb|ACY88762.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158416|emb|CBW17923.1| Holliday junction DNA helicase ruvA [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912889|dbj|BAJ36863.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085488|emb|CBY95269.1| Holliday junction ATP-dependent DNA helicase ruvA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224538|gb|EFX49601.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130179|gb|ADX17609.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326627451|gb|EGE33794.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988789|gb|AEF07772.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|15802274|ref|NP_288298.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 EDL933] gi|15831825|ref|NP_310598.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. Sakai] gi|16129814|ref|NP_416375.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli str. K-12 substr. MG1655] gi|26248127|ref|NP_754167.1| Holliday junction DNA helicase RuvA [Escherichia coli CFT073] gi|82543694|ref|YP_407641.1| Holliday junction DNA helicase RuvA [Shigella boydii Sb227] gi|89108701|ref|AP_002481.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli str. K-12 substr. W3110] gi|91211086|ref|YP_541072.1| Holliday junction DNA helicase RuvA [Escherichia coli UTI89] gi|110641979|ref|YP_669709.1| Holliday junction DNA helicase RuvA [Escherichia coli 536] gi|117624013|ref|YP_852926.1| Holliday junction DNA helicase motor protein [Escherichia coli APEC O1] gi|157159402|ref|YP_001463164.1| Holliday junction DNA helicase RuvA [Escherichia coli E24377A] gi|168747889|ref|ZP_02772911.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4113] gi|168757895|ref|ZP_02782902.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4401] gi|168762345|ref|ZP_02787352.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4501] gi|168770844|ref|ZP_02795851.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4486] gi|168776592|ref|ZP_02801599.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4196] gi|168783161|ref|ZP_02808168.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4076] gi|168788281|ref|ZP_02813288.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC869] gi|168801903|ref|ZP_02826910.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC508] gi|170081517|ref|YP_001730837.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli str. K-12 substr. DH10B] gi|170683558|ref|YP_001743383.1| Holliday junction DNA helicase RuvA [Escherichia coli SMS-3-5] gi|187730219|ref|YP_001879638.1| Holliday junction DNA helicase RuvA [Shigella boydii CDC 3083-94] gi|191173018|ref|ZP_03034552.1| Holliday junction DNA helicase RuvA [Escherichia coli F11] gi|193066070|ref|ZP_03047127.1| Holliday junction DNA helicase RuvA [Escherichia coli E22] gi|194429662|ref|ZP_03062180.1| Holliday junction DNA helicase RuvA [Escherichia coli B171] gi|195940293|ref|ZP_03085675.1| Holliday junction DNA helicase motor protein [Escherichia coli O157:H7 str. EC4024] gi|208810719|ref|ZP_03252595.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4206] gi|208816922|ref|ZP_03258042.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4045] gi|209396228|ref|YP_002270944.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4115] gi|209919228|ref|YP_002293312.1| Holliday junction DNA helicase RuvA [Escherichia coli SE11] gi|215487074|ref|YP_002329505.1| Holliday junction DNA helicase RuvA [Escherichia coli O127:H6 str. E2348/69] gi|217328695|ref|ZP_03444776.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. TW14588] gi|218554449|ref|YP_002387362.1| Holliday junction DNA helicase RuvA [Escherichia coli IAI1] gi|218558726|ref|YP_002391639.1| Holliday junction DNA helicase RuvA [Escherichia coli S88] gi|218689799|ref|YP_002398011.1| Holliday junction DNA helicase RuvA [Escherichia coli ED1a] gi|218695427|ref|YP_002403094.1| Holliday junction DNA helicase RuvA [Escherichia coli 55989] gi|218699567|ref|YP_002407196.1| Holliday junction DNA helicase RuvA [Escherichia coli IAI39] gi|218705362|ref|YP_002412881.1| Holliday junction DNA helicase RuvA [Escherichia coli UMN026] gi|227885711|ref|ZP_04003516.1| Holliday junction DNA helicase motor protein [Escherichia coli 83972] gi|237705815|ref|ZP_04536296.1| holliday junction helicase subunit B [Escherichia sp. 3_2_53FAA] gi|238901076|ref|YP_002926872.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli BW2952] gi|254793485|ref|YP_003078322.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. TW14359] gi|256022473|ref|ZP_05436338.1| Holliday junction DNA helicase RuvA [Escherichia sp. 4_1_40B] gi|260844205|ref|YP_003221983.1| component of RuvABC resolvasome, regulatory subunit RuvA [Escherichia coli O103:H2 str. 12009] gi|261227638|ref|ZP_05941919.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. FRIK2000] gi|261258196|ref|ZP_05950729.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. FRIK966] gi|291283043|ref|YP_003499861.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli O55:H7 str. CB9615] gi|293405356|ref|ZP_06649348.1| ruvA [Escherichia coli FVEC1412] gi|293410173|ref|ZP_06653749.1| Holliday junction DNA helicase RuvA [Escherichia coli B354] gi|293415176|ref|ZP_06657819.1| Holliday junction DNA helicase RuvA [Escherichia coli B185] gi|293446248|ref|ZP_06662670.1| Holliday junction DNA helicase RuvA [Escherichia coli B088] gi|298380998|ref|ZP_06990597.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli FVEC1302] gi|300824197|ref|ZP_07104315.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 119-7] gi|300899111|ref|ZP_07117394.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 198-1] gi|300904745|ref|ZP_07122575.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 84-1] gi|300917562|ref|ZP_07134217.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 115-1] gi|300935836|ref|ZP_07150794.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 21-1] gi|300982165|ref|ZP_07175900.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 200-1] gi|300994110|ref|ZP_07180693.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 45-1] gi|301018303|ref|ZP_07182812.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 69-1] gi|301029311|ref|ZP_07192408.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 196-1] gi|301050785|ref|ZP_07197642.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 185-1] gi|301304450|ref|ZP_07210562.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 124-1] gi|306814309|ref|ZP_07448475.1| Holliday junction DNA helicase RuvA [Escherichia coli NC101] gi|307138524|ref|ZP_07497880.1| Holliday junction DNA helicase RuvA [Escherichia coli H736] gi|312967063|ref|ZP_07781281.1| holliday junction DNA helicase RuvA [Escherichia coli 2362-75] gi|331642475|ref|ZP_08343610.1| holliday junction DNA helicase RuvA [Escherichia coli H736] gi|331647458|ref|ZP_08348550.1| holliday junction DNA helicase RuvA [Escherichia coli M605] gi|331653270|ref|ZP_08354275.1| holliday junction DNA helicase RuvA [Escherichia coli M718] gi|331657910|ref|ZP_08358872.1| holliday junction DNA helicase RuvA [Escherichia coli TA206] gi|331673391|ref|ZP_08374159.1| holliday junction DNA helicase RuvA [Escherichia coli TA280] gi|331677742|ref|ZP_08378417.1| holliday junction DNA helicase RuvA [Escherichia coli H591] gi|331683367|ref|ZP_08383968.1| holliday junction DNA helicase RuvA [Escherichia coli H299] gi|67472389|sp|P0A809|RUVA_ECOLI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|67472390|sp|P0A810|RUVA_ECOL6 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|67472391|sp|P0A811|RUVA_ECO57 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|90135806|sp|Q322E5|RUVA_SHIBS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123343927|sp|Q0TGX1|RUVA_ECOL5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123387921|sp|Q1RAS3|RUVA_ECOUT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230548|sp|A1AC22|RUVA_ECOK1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|167012658|sp|A7ZMY5|RUVA_ECO24 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698730|sp|B5YR06|RUVA_ECO5E RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698731|sp|B6IBU0|RUVA_ECOSE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226725440|sp|B7MBS0|RUVA_ECO45 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226725441|sp|B7NS57|RUVA_ECO7I RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226725442|sp|B7M2F2|RUVA_ECO8A RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226725443|sp|B7NBL2|RUVA_ECOLU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226725444|sp|B1LD10|RUVA_ECOSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560029|sp|B1XHC9|RUVA_ECODH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560128|sp|B2TWQ2|RUVA_SHIB3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254766959|sp|B7USN8|RUVA_ECO27 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254766960|sp|B7L7R4|RUVA_ECO55 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254766961|sp|B7MVP7|RUVA_ECO81 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|259495641|sp|C4ZQE5|RUVA_ECOBW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|5107494|pdb|1BDX|A Chain A, E. Coli Dna Helicase Ruva With Bound Dna Holliday Junction, Alpha Carbons And Phosphate Atoms Only gi|5107495|pdb|1BDX|B Chain B, E. Coli Dna Helicase Ruva With Bound Dna Holliday Junction, Alpha Carbons And Phosphate Atoms Only gi|5107496|pdb|1BDX|C Chain C, E. Coli Dna Helicase Ruva With Bound Dna Holliday Junction, Alpha Carbons And Phosphate Atoms Only gi|5107497|pdb|1BDX|D Chain D, E. Coli Dna Helicase Ruva With Bound Dna Holliday Junction, Alpha Carbons And Phosphate Atoms Only gi|9955149|pdb|1C7Y|A Chain A, E.Coli Ruva-Holliday Junction Complex gi|157831340|pdb|1HJP|A Chain A, Holliday Junction Binding Protein Ruva From E. Coli gi|12515917|gb|AAG56851.1|AE005408_9 Holliday junction helicase subunit B; branch migration; repair [Escherichia coli O157:H7 str. EDL933] gi|26108530|gb|AAN80732.1|AE016761_307 Holliday junction DNA helicase ruvA [Escherichia coli CFT073] gi|147782|gb|AAA24612.1| ruvA protein (gtg start) [Escherichia coli] gi|1736508|dbj|BAA15672.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli str. K12 substr. W3110] gi|1788168|gb|AAC74931.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli str. K-12 substr. MG1655] gi|13362039|dbj|BAB35994.1| Holliday junction helicase subunit B [Escherichia coli O157:H7 str. Sakai] gi|81245105|gb|ABB65813.1| Holliday junction helicase subunit B [Shigella boydii Sb227] gi|91072660|gb|ABE07541.1| RuvA protein, Holliday junction helicase subunit B [Escherichia coli UTI89] gi|110343571|gb|ABG69808.1| holliday junction DNA helicase RuvA [Escherichia coli 536] gi|115513137|gb|ABJ01212.1| Holliday junction DNA helicase motor protein [Escherichia coli APEC O1] gi|157081432|gb|ABV21140.1| Holliday junction DNA helicase RuvA [Escherichia coli E24377A] gi|169889352|gb|ACB03059.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli str. K-12 substr. DH10B] gi|170521276|gb|ACB19454.1| Holliday junction DNA helicase RuvA [Escherichia coli SMS-3-5] gi|187427211|gb|ACD06485.1| Holliday junction DNA helicase RuvA [Shigella boydii CDC 3083-94] gi|187768087|gb|EDU31931.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4196] gi|188017456|gb|EDU55578.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4113] gi|188999499|gb|EDU68485.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4076] gi|189355165|gb|EDU73584.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4401] gi|189360288|gb|EDU78707.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4486] gi|189367348|gb|EDU85764.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4501] gi|189372002|gb|EDU90418.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC869] gi|189376026|gb|EDU94442.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC508] gi|190906729|gb|EDV66334.1| Holliday junction DNA helicase RuvA [Escherichia coli F11] gi|192926307|gb|EDV80944.1| Holliday junction DNA helicase RuvA [Escherichia coli E22] gi|194412304|gb|EDX28608.1| Holliday junction DNA helicase RuvA [Escherichia coli B171] gi|195182923|dbj|BAG66491.1| Holliday junction helicase subunit B [Escherichia coli O111:H-] gi|208725235|gb|EDZ74942.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4206] gi|208731265|gb|EDZ79954.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4045] gi|209157628|gb|ACI35061.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC4115] gi|209767468|gb|ACI82046.1| Holliday junction helicase subunit B [Escherichia coli] gi|209767470|gb|ACI82047.1| Holliday junction helicase subunit B [Escherichia coli] gi|209767472|gb|ACI82048.1| Holliday junction helicase subunit B [Escherichia coli] gi|209767474|gb|ACI82049.1| Holliday junction helicase subunit B [Escherichia coli] gi|209767476|gb|ACI82050.1| Holliday junction helicase subunit B [Escherichia coli] gi|209912487|dbj|BAG77561.1| holliday junction helicase subunit RuvA [Escherichia coli SE11] gi|215265146|emb|CAS09534.1| RuvA component of RuvABC resolvasome, regulatory subunit [Escherichia coli O127:H6 str. E2348/69] gi|217318042|gb|EEC26469.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. TW14588] gi|218352159|emb|CAU97898.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli 55989] gi|218361217|emb|CAQ98801.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli IAI1] gi|218365495|emb|CAR03222.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli S88] gi|218369553|emb|CAR17322.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli IAI39] gi|218427363|emb|CAR08163.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli ED1a] gi|218432459|emb|CAR13352.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli UMN026] gi|222033610|emb|CAP76351.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli LF82] gi|226900572|gb|EEH86831.1| holliday junction helicase subunit B [Escherichia sp. 3_2_53FAA] gi|227837284|gb|EEJ47750.1| Holliday junction DNA helicase motor protein [Escherichia coli 83972] gi|238860169|gb|ACR62167.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli BW2952] gi|254592885|gb|ACT72246.1| component of RuvABC resolvasome, regulatory subunit [Escherichia coli O157:H7 str. TW14359] gi|257759352|dbj|BAI30849.1| component of RuvABC resolvasome, regulatory subunit RuvA [Escherichia coli O103:H2 str. 12009] gi|260449016|gb|ACX39438.1| Holliday junction DNA helicase RuvA [Escherichia coli DH1] gi|281178931|dbj|BAI55261.1| holliday junction helicase subunit RuvA [Escherichia coli SE15] gi|284921781|emb|CBG34854.1| holliday junction ATP-dependent DNA helicase [Escherichia coli 042] gi|290762916|gb|ADD56877.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli O55:H7 str. CB9615] gi|291323078|gb|EFE62506.1| Holliday junction DNA helicase RuvA [Escherichia coli B088] gi|291427564|gb|EFF00591.1| ruvA [Escherichia coli FVEC1412] gi|291432824|gb|EFF05803.1| Holliday junction DNA helicase RuvA [Escherichia coli B185] gi|291470641|gb|EFF13125.1| Holliday junction DNA helicase RuvA [Escherichia coli B354] gi|294493531|gb|ADE92287.1| Holliday junction DNA helicase RuvA [Escherichia coli IHE3034] gi|298278440|gb|EFI19954.1| Holliday junction ATP-dependent DNA helicase ruvA [Escherichia coli FVEC1302] gi|299877737|gb|EFI85948.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 196-1] gi|300297540|gb|EFJ53925.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 185-1] gi|300307321|gb|EFJ61841.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 200-1] gi|300357268|gb|EFJ73138.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 198-1] gi|300399739|gb|EFJ83277.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 69-1] gi|300403329|gb|EFJ86867.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 84-1] gi|300406372|gb|EFJ89910.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 45-1] gi|300415216|gb|EFJ98526.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 115-1] gi|300458948|gb|EFK22441.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 21-1] gi|300523268|gb|EFK44337.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 119-7] gi|300840301|gb|EFK68061.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 124-1] gi|305852468|gb|EFM52919.1| Holliday junction DNA helicase RuvA [Escherichia coli NC101] gi|307553880|gb|ADN46655.1| holliday junction ATP-dependent DNA helicase RuvA [Escherichia coli ABU 83972] gi|307626656|gb|ADN70960.1| Holliday junction DNA helicase RuvA [Escherichia coli UM146] gi|312288527|gb|EFR16429.1| holliday junction DNA helicase RuvA [Escherichia coli 2362-75] gi|312946461|gb|ADR27288.1| Holliday junction DNA helicase RuvA [Escherichia coli O83:H1 str. NRG 857C] gi|315136504|dbj|BAJ43663.1| Holliday junction DNA resolvasome [Escherichia coli DH1] gi|315257307|gb|EFU37275.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 85-1] gi|315286570|gb|EFU46005.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 110-3] gi|315290340|gb|EFU49716.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 153-1] gi|315296552|gb|EFU55849.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 16-3] gi|320173573|gb|EFW48768.1| Holliday junction DNA helicase RuvA [Shigella dysenteriae CDC 74-1112] gi|320182601|gb|EFW57490.1| Holliday junction DNA helicase RuvA [Shigella boydii ATCC 9905] gi|320187795|gb|EFW62469.1| Holliday junction DNA helicase RuvA [Shigella flexneri CDC 796-83] gi|320188562|gb|EFW63224.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. EC1212] gi|320194423|gb|EFW69054.1| Holliday junction DNA helicase RuvA [Escherichia coli WV_060327] gi|320641715|gb|EFX11103.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. G5101] gi|320647075|gb|EFX15908.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H- str. 493-89] gi|320652358|gb|EFX20656.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H- str. H 2687] gi|320657959|gb|EFX25721.1| Holliday junction DNA helicase RuvA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658532|gb|EFX26226.1| Holliday junction DNA helicase RuvA [Escherichia coli O55:H7 str. USDA 5905] gi|320668430|gb|EFX35257.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. LSU-61] gi|323158654|gb|EFZ44668.1| holliday junction DNA helicase RuvA [Escherichia coli E128010] gi|323174753|gb|EFZ60369.1| holliday junction DNA helicase RuvA [Escherichia coli LT-68] gi|323186868|gb|EFZ72187.1| holliday junction DNA helicase RuvA [Escherichia coli RN587/1] gi|323940471|gb|EGB36662.1| Holliday junction DNA helicase RuvA [Escherichia coli E482] gi|323948253|gb|EGB44241.1| Holliday junction DNA helicase RuvA [Escherichia coli H120] gi|323952363|gb|EGB48236.1| Holliday junction DNA helicase RuvA [Escherichia coli H252] gi|323956492|gb|EGB52234.1| Holliday junction DNA helicase RuvA [Escherichia coli H263] gi|323968281|gb|EGB63688.1| Holliday junction DNA helicase RuvA [Escherichia coli M863] gi|323977955|gb|EGB73041.1| Holliday junction DNA helicase RuvA [Escherichia coli TW10509] gi|324007232|gb|EGB76451.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 57-2] gi|324012870|gb|EGB82089.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 60-1] gi|324018004|gb|EGB87223.1| Holliday junction DNA helicase RuvA [Escherichia coli MS 117-3] gi|325496996|gb|EGC94855.1| Holliday junction DNA helicase RuvA [Escherichia fergusonii ECD227] gi|326342241|gb|EGD66022.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. 1044] gi|326343791|gb|EGD67553.1| Holliday junction DNA helicase RuvA [Escherichia coli O157:H7 str. 1125] gi|327252987|gb|EGE64641.1| holliday junction DNA helicase RuvA [Escherichia coli STEC_7v] gi|330911671|gb|EGH40181.1| holliday junction DNA helicase RuvA [Escherichia coli AA86] gi|331039273|gb|EGI11493.1| holliday junction DNA helicase RuvA [Escherichia coli H736] gi|331043182|gb|EGI15320.1| holliday junction DNA helicase RuvA [Escherichia coli M605] gi|331049368|gb|EGI21440.1| holliday junction DNA helicase RuvA [Escherichia coli M718] gi|331056158|gb|EGI28167.1| holliday junction DNA helicase RuvA [Escherichia coli TA206] gi|331069589|gb|EGI40976.1| holliday junction DNA helicase RuvA [Escherichia coli TA280] gi|331074202|gb|EGI45522.1| holliday junction DNA helicase RuvA [Escherichia coli H591] gi|331079582|gb|EGI50779.1| holliday junction DNA helicase RuvA [Escherichia coli H299] gi|332090038|gb|EGI95138.1| holliday junction DNA helicase RuvA [Shigella boydii 5216-82] gi|332096672|gb|EGJ01663.1| holliday junction DNA helicase RuvA [Shigella boydii 3594-74] gi|332343587|gb|AEE56921.1| holliday junction DNA helicase RuvA [Escherichia coli UMNK88] gi|333003565|gb|EGK23105.1| holliday junction DNA helicase RuvA [Shigella flexneri VA-6] gi|333004714|gb|EGK24237.1| holliday junction DNA helicase RuvA [Shigella flexneri K-272] gi|333018434|gb|EGK37732.1| holliday junction DNA helicase RuvA [Shigella flexneri K-227] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|7766817|pdb|1D8L|A Chain A, E. Coli Holliday Junction Binding Protein Ruva Nh2 Region Lacking Domain Iii gi|7766818|pdb|1D8L|B Chain B, E. Coli Holliday Junction Binding Protein Ruva Nh2 Region Lacking Domain Iii Length = 149 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|157830735|pdb|1CUK|A Chain A, Escherichia Coli Ruva Protein At Ph 4.9 And Room Temperature gi|581226|emb|CAA30119.1| unnamed protein product [Escherichia coli] Length = 203 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGALVKLPGIGKKTAERL---IVEMKD 130 >gi|210622015|ref|ZP_03292958.1| hypothetical protein CLOHIR_00904 [Clostridium hiranonis DSM 13275] gi|210154460|gb|EEA85466.1| hypothetical protein CLOHIR_00904 [Clostridium hiranonis DSM 13275] Length = 200 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 17/40 (42%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 I +++ PG G ++A R L L K ++ + Sbjct: 106 IAKISKAPGVGKKTAERIILELKDKIDKTQIEFEPTLLEA 145 >gi|77919931|ref|YP_357746.1| Holliday junction DNA helicase RuvA [Pelobacter carbinolicus DSM 2380] gi|90135490|sp|Q3A231|RUVA_PELCD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|77546014|gb|ABA89576.1| Holliday junction DNA helicase subunit RuvA [Pelobacter carbinolicus DSM 2380] Length = 197 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K LA +PG G ++A R L L Sbjct: 107 KHLATVPGIGKKTAERLVLEL 127 >gi|34556867|ref|NP_906682.1| Holliday junction DNA helicase RuvA [Wolinella succinogenes DSM 1740] gi|44888365|sp|Q7MA70|RUVA_WOLSU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|34482582|emb|CAE09582.1| PUTATIVE HOLLIDAY JUNCTION DNA HELICASE [Wolinella succinogenes] Length = 189 Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 5/32 (15%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRA 31 T +I K L R+PG GP+SA R Sbjct: 91 YTPPTFAQIIQAQDVKALQRVPGIGPKSAGRI 122 >gi|332161518|ref|YP_004298095.1| Holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665748|gb|ADZ42392.1| Holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860793|emb|CBX71080.1| holliday junction ATP-dependent DNA helicase ruvA [Yersinia enterocolitica W22703] Length = 205 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|318605500|emb|CBY26998.1| holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp. palearctica Y11] Length = 205 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|270262223|ref|ZP_06190495.1| holliday junction ATP-dependent DNA helicase RuvA [Serratia odorifera 4Rx13] gi|270044099|gb|EFA17191.1| holliday junction ATP-dependent DNA helicase RuvA [Serratia odorifera 4Rx13] Length = 204 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|238792583|ref|ZP_04636216.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia intermedia ATCC 29909] gi|238728218|gb|EEQ19739.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia intermedia ATCC 29909] Length = 188 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 91 ITTLVKLPGVGKKTAERLV 109 >gi|238788520|ref|ZP_04632313.1| Holliday junction DNA helicase RuvA [Yersinia frederiksenii ATCC 33641] gi|238723433|gb|EEQ15080.1| Holliday junction DNA helicase RuvA [Yersinia frederiksenii ATCC 33641] Length = 194 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 98 ITTLVKLPGVGKKTAERLV 116 >gi|238796296|ref|ZP_04639805.1| Holliday junction DNA helicase RuvA [Yersinia mollaretii ATCC 43969] gi|238719741|gb|EEQ11548.1| Holliday junction DNA helicase RuvA [Yersinia mollaretii ATCC 43969] Length = 196 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 98 ITTLVKLPGVGKKTAERLV 116 >gi|238786430|ref|ZP_04630350.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia bercovieri ATCC 43970] gi|238712664|gb|EEQ04756.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia bercovieri ATCC 43970] Length = 196 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 98 ITTLVKLPGVGKKTAERLV 116 >gi|238754860|ref|ZP_04616210.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia ruckeri ATCC 29473] gi|238706871|gb|EEP99238.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia ruckeri ATCC 29473] Length = 204 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|238756969|ref|ZP_04618157.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia aldovae ATCC 35236] gi|238704799|gb|EEP97328.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia aldovae ATCC 35236] Length = 205 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|238762969|ref|ZP_04623936.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia kristensenii ATCC 33638] gi|238698727|gb|EEP91477.1| Holliday junction ATP-dependent DNA helicase ruvA [Yersinia kristensenii ATCC 33638] Length = 189 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 91 ITTLVKLPGVGKKTAERLV 109 >gi|123442635|ref|YP_001006612.1| Holliday junction DNA helicase RuvA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166231457|sp|A1JRJ9|RUVA_YERE8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|122089596|emb|CAL12445.1| Holliday junction DNA helicase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 205 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|149366014|ref|ZP_01888049.1| Holliday junction DNA helicase [Yersinia pestis CA88-4125] gi|153949523|ref|YP_001401004.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis IP 31758] gi|161484795|ref|NP_669562.2| Holliday junction DNA helicase RuvA [Yersinia pestis KIM 10] gi|161511391|ref|NP_993241.2| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Microtus str. 91001] gi|161760577|ref|YP_070557.2| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis IP 32953] gi|162420589|ref|YP_001606843.1| Holliday junction DNA helicase RuvA [Yersinia pestis Angola] gi|165928362|ref|ZP_02224194.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Orientalis str. F1991016] gi|165938889|ref|ZP_02227443.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Orientalis str. IP275] gi|166009183|ref|ZP_02230081.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua str. E1979001] gi|166210491|ref|ZP_02236526.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401440|ref|ZP_02306937.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420007|ref|ZP_02311760.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424505|ref|ZP_02316258.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470862|ref|ZP_02335566.1| Holliday junction DNA helicase motor protein [Yersinia pestis FV-1] gi|170024378|ref|YP_001720883.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis YPIII] gi|186895407|ref|YP_001872519.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis PB1/+] gi|218929164|ref|YP_002347039.1| Holliday junction DNA helicase RuvA [Yersinia pestis CO92] gi|229894771|ref|ZP_04509951.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis Pestoides A] gi|229897474|ref|ZP_04512630.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898120|ref|ZP_04513269.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229901979|ref|ZP_04517100.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis Nepal516] gi|270490837|ref|ZP_06207911.1| Holliday junction DNA helicase RuvA [Yersinia pestis KIM D27] gi|294503877|ref|YP_003567939.1| Holliday junction DNA helicase motor protein [Yersinia pestis Z176003] gi|20455249|sp|Q8ZEU6|RUVA_YERPE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|90146256|sp|Q66AU0|RUVA_YERPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|167012664|sp|A7FIC6|RUVA_YERP3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560143|sp|B2K323|RUVA_YERPB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560144|sp|A9QYX3|RUVA_YERPG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560145|sp|B1JLL1|RUVA_YERPY RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|115347775|emb|CAL20692.1| Holliday junction DNA helicase [Yersinia pestis CO92] gi|149292427|gb|EDM42501.1| Holliday junction DNA helicase [Yersinia pestis CA88-4125] gi|152961018|gb|ABS48479.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis IP 31758] gi|162353404|gb|ABX87352.1| Holliday junction DNA helicase RuvA [Yersinia pestis Angola] gi|165913252|gb|EDR31875.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Orientalis str. IP275] gi|165919645|gb|EDR36978.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Orientalis str. F1991016] gi|165991738|gb|EDR44039.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua str. E1979001] gi|166207671|gb|EDR52151.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua str. B42003004] gi|166961702|gb|EDR57723.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049136|gb|EDR60544.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056387|gb|EDR66156.1| Holliday junction DNA helicase RuvA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750912|gb|ACA68430.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis YPIII] gi|186698433|gb|ACC89062.1| Holliday junction DNA helicase RuvA [Yersinia pseudotuberculosis PB1/+] gi|229680875|gb|EEO76970.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis Nepal516] gi|229688836|gb|EEO80903.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229693811|gb|EEO83860.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702244|gb|EEO90263.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis Pestoides A] gi|262362004|gb|ACY58725.1| Holliday junction DNA helicase motor protein [Yersinia pestis D106004] gi|262365859|gb|ACY62416.1| Holliday junction DNA helicase motor protein [Yersinia pestis D182038] gi|270339341|gb|EFA50118.1| Holliday junction DNA helicase RuvA [Yersinia pestis KIM D27] gi|294354336|gb|ADE64677.1| Holliday junction DNA helicase motor protein [Yersinia pestis Z176003] gi|320015265|gb|ADV98836.1| component of RuvABC resolvasome, regulatory subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 204 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLVKLPGVGKKTAERLV 125 >gi|108807436|ref|YP_651352.1| Holliday junction DNA helicase RuvA [Yersinia pestis Antiqua] gi|108811697|ref|YP_647464.1| Holliday junction DNA helicase RuvA [Yersinia pestis Nepal516] gi|145598360|ref|YP_001162436.1| Holliday junction DNA helicase RuvA [Yersinia pestis Pestoides F] gi|21959100|gb|AAM85813.1|AE013828_4 Holliday junction helicase subunit B [Yersinia pestis KIM 10] gi|45436564|gb|AAS62118.1| Holliday junction helicase subunit B [Yersinia pestis biovar Microtus str. 91001] gi|51589648|emb|CAH21278.1| Holliday junction DNA helicase [Yersinia pseudotuberculosis IP 32953] gi|108775345|gb|ABG17864.1| Holliday junction DNA helicase subunit RuvA [Yersinia pestis Nepal516] gi|108779349|gb|ABG13407.1| Holliday junction DNA helicase subunit RuvA [Yersinia pestis Antiqua] gi|145210056|gb|ABP39463.1| Holliday junction DNA helicase subunit RuvA [Yersinia pestis Pestoides F] Length = 226 Score = 37.9 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 129 ITTLVKLPGVGKKTAERLV 147 >gi|237731899|ref|ZP_04562380.1| holliday junction helicase subunit B [Citrobacter sp. 30_2] gi|226907438|gb|EEH93356.1| holliday junction helicase subunit B [Citrobacter sp. 30_2] Length = 203 Score = 37.9 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 130 >gi|283796454|ref|ZP_06345607.1| holliday junction DNA helicase RuvA [Clostridium sp. M62/1] gi|291075862|gb|EFE13226.1| holliday junction DNA helicase RuvA [Clostridium sp. M62/1] Length = 248 Score = 37.9 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K ++R PG G ++A+R L L Sbjct: 148 VKAISRAPGIGAKTAQRIILDL 169 >gi|329118736|ref|ZP_08247436.1| crossover junction ATP-dependent DNA helicase RuvA [Neisseria bacilliformis ATCC BAA-1200] gi|327465171|gb|EGF11456.1| crossover junction ATP-dependent DNA helicase RuvA [Neisseria bacilliformis ATCC BAA-1200] Length = 193 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI--KILARI---PGFGPRSARRATLHL 35 + E+ + + + R+ PG G ++A R L L Sbjct: 91 SAMNTAELAQAVAQEDVKRLSAAPGIGKKTAERMILEL 128 >gi|301066351|ref|YP_003788374.1| ATP-dependent exoDNAse [Lactobacillus casei str. Zhang] gi|300438758|gb|ADK18524.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [Lactobacillus casei str. Zhang] Length = 822 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Query: 13 LIKILA--RIPGFGPRSARRATLHL 35 L+ L+ + PG GP++A + HL Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114 >gi|239631616|ref|ZP_04674647.1| ATP-dependent exoDNAse [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526081|gb|EEQ65082.1| ATP-dependent exoDNAse [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 843 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Query: 13 LIKILA--RIPGFGPRSARRATLHL 35 L+ L+ + PG GP++A + HL Sbjct: 111 LVDYLSSDKFPGIGPKTATKIIDHL 135 >gi|227535214|ref|ZP_03965263.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187098|gb|EEI67165.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 822 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Query: 13 LIKILA--RIPGFGPRSARRATLHL 35 L+ L+ + PG GP++A + HL Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114 >gi|191638299|ref|YP_001987465.1| Exodeoxyribonuclease V, alpha subunit [Lactobacillus casei BL23] gi|190712601|emb|CAQ66607.1| Exodeoxyribonuclease V, alpha subunit [Lactobacillus casei BL23] gi|327382327|gb|AEA53803.1| Exodeoxyribonuclease V alpha chain [Lactobacillus casei LC2W] gi|327385527|gb|AEA57001.1| Exodeoxyribonuclease V alpha chain [Lactobacillus casei BD-II] Length = 822 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Query: 13 LIKILA--RIPGFGPRSARRATLHL 35 L+ L+ + PG GP++A + HL Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114 >gi|116494786|ref|YP_806520.1| exonuclease V subunit alpha [Lactobacillus casei ATCC 334] gi|116104936|gb|ABJ70078.1| ATP-dependent DNA helicase, RecD/TraA family [Lactobacillus casei ATCC 334] Length = 822 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Query: 13 LIKILA--RIPGFGPRSARRATLHL 35 L+ L+ + PG GP++A + HL Sbjct: 90 LVDYLSSDKFPGIGPKTATKIIDHL 114 >gi|328947934|ref|YP_004365271.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema succinifaciens DSM 2489] gi|328448258|gb|AEB13974.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema succinifaciens DSM 2489] Length = 206 Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L ++PG GP++A + L L Sbjct: 107 VDALKKVPGVGPKTAGKIILSL 128 >gi|312621877|ref|YP_004023490.1| Radical SAM domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202344|gb|ADQ45671.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 415 Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%) Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54 + L R+PG G +SARR H + + L + + Sbjct: 320 EQLIRVPGIGIKSARRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361 >gi|317048520|ref|YP_004116168.1| Holliday junction DNA helicase RuvA [Pantoea sp. At-9b] gi|316950137|gb|ADU69612.1| Holliday junction DNA helicase RuvA [Pantoea sp. At-9b] Length = 204 Score = 37.9 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 14 IKILARIPGFGPRSARRAT 32 I +L ++PG G ++A R Sbjct: 107 IAVLVKLPGVGKKTAERLV 125 >gi|220910036|ref|YP_002485347.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7425] gi|219866647|gb|ACL46986.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7425] Length = 207 Score = 37.9 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 8/35 (22%) Query: 9 EIENLIKI--------LARIPGFGPRSARRATLHL 35 E+ L++ L+R PG G ++A R L L Sbjct: 98 ELAELVQAIVSGNTRTLSRTPGVGSKTAERIALEL 132 >gi|78044333|ref|YP_360355.1| Holliday junction DNA helicase RuvA [Carboxydothermus hydrogenoformans Z-2901] gi|90134706|sp|Q3ABX9|RUVA_CARHZ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|77996448|gb|ABB15347.1| Holliday junction DNA helicase RuvA [Carboxydothermus hydrogenoformans Z-2901] Length = 195 Score = 37.9 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 + T +++ +I K L ++PG G ++A+R L L Sbjct: 90 NEFTPEKLNWVIANKDEKALTKVPGVGKKNAQRLFLEL 127 >gi|330444140|ref|YP_004377126.1| Holliday junction DNA helicase RuvA [Chlamydophila pecorum E58] gi|328807250|gb|AEB41423.1| Holliday junction DNA helicase RuvA [Chlamydophila pecorum E58] Length = 207 Score = 37.9 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 +K L+ IPG G ++A + L L K+K + PL Sbjct: 108 VKALSSIPGIGKKTAEKLMLDL-KQKLPSVLPL 139 >gi|167856020|ref|ZP_02478765.1| holliday junction ATP-dependent DNA helicase RuvA [Haemophilus parasuis 29755] gi|167852859|gb|EDS24128.1| holliday junction ATP-dependent DNA helicase RuvA [Haemophilus parasuis 29755] Length = 202 Score = 37.9 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 4/30 (13%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRA 31 I +E+ LI +IPG G ++A R Sbjct: 99 MSAIEQEELAKLI----KIPGIGRKTAERL 124 >gi|167623851|ref|YP_001674145.1| Holliday junction DNA helicase RuvA [Shewanella halifaxensis HAW-EB4] gi|189045770|sp|B0TSA6|RUVA_SHEHH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|167353873|gb|ABZ76486.1| Holliday junction DNA helicase RuvA [Shewanella halifaxensis HAW-EB4] Length = 205 Score = 37.9 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|15602842|ref|NP_245914.1| Holliday junction DNA helicase motor protein [Pasteurella multocida subsp. multocida str. Pm70] gi|13431841|sp|P57893|RUVA_PASMU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|12721303|gb|AAK03061.1| RuvA [Pasteurella multocida subsp. multocida str. Pm70] Length = 204 Score = 37.5 bits (86), Expect = 0.91, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ +E I+ L+++ PG G ++A R Sbjct: 91 SAMSVEEFAYAIEREELSKLVKIPGVGKKTAERL 124 >gi|219871499|ref|YP_002475874.1| holliday junction DNA helicase motor protein [Haemophilus parasuis SH0165] gi|219691703|gb|ACL32926.1| holliday junction DNA helicase motor protein [Haemophilus parasuis SH0165] Length = 171 Score = 37.5 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 4/30 (13%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRA 31 I +E+ LI +IPG G ++A R Sbjct: 68 MSAIEQEELAKLI----KIPGIGRKTAERL 93 >gi|254410540|ref|ZP_05024319.1| Holliday junction DNA helicase RuvA [Microcoleus chthonoplastes PCC 7420] gi|196182746|gb|EDX77731.1| Holliday junction DNA helicase RuvA [Microcoleus chthonoplastes PCC 7420] Length = 210 Score = 37.5 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 ++NL++ LA+ PG G ++A R L L Sbjct: 101 LQNLVQAIVTGNTRTLAKTPGVGSKTAERIALEL 134 >gi|78485238|ref|YP_391163.1| Holliday junction DNA helicase RuvA [Thiomicrospira crunogena XCL-2] gi|123755243|sp|Q31H84|RUVA_THICR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|78363524|gb|ABB41489.1| Holliday junction DNA helicase subunit RuvA [Thiomicrospira crunogena XCL-2] Length = 200 Score = 37.5 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRAT 32 ++ + L+ L +IPG G ++A R Sbjct: 91 SAMSVNDFVGLVDVGDAPALTKIPGVGKKTAERLV 125 >gi|257455268|ref|ZP_05620503.1| holliday junction DNA helicase RuvA [Enhydrobacter aerosaccus SK60] gi|257447230|gb|EEV22238.1| holliday junction DNA helicase RuvA [Enhydrobacter aerosaccus SK60] Length = 206 Score = 37.5 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 9/54 (16%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEA 49 M +T +E+ + L RIPG G ++A+R + L + + L + Sbjct: 89 MMSTVTVQELHQFVMNNDELALTRIPGVGKKTAQRLIVEL----KDKIKHLGDT 138 >gi|238751590|ref|ZP_04613080.1| Holliday junction DNA helicase RuvA [Yersinia rohdei ATCC 43380] gi|238710152|gb|EEQ02380.1| Holliday junction DNA helicase RuvA [Yersinia rohdei ATCC 43380] Length = 204 Score = 37.5 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 ITTLIKLPGVGKKTAERLV 125 >gi|159027980|emb|CAO87940.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 209 Score = 37.5 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 8/34 (23%) Query: 10 IENLI--------KILARIPGFGPRSARRATLHL 35 IE L+ KIL++ PG G ++A R L L Sbjct: 101 IEELVVAIVTGNTKILSKTPGVGLKTAERIALEL 134 >gi|227549154|ref|ZP_03979203.1| Holliday junction DNA helicase motor protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078774|gb|EEI16737.1| Holliday junction DNA helicase motor protein [Corynebacterium lipophiloflavum DSM 44291] Length = 206 Score = 37.5 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%) Query: 13 LIKILARIPGFGPRSARRATLHL 35 IK + IPG G + A R L L Sbjct: 108 AIKRIQTIPGVGKKMAERMALEL 130 >gi|329117951|ref|ZP_08246664.1| toprim domain protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465839|gb|EGF12111.1| toprim domain protein [Neisseria bacilliformis ATCC BAA-1200] Length = 791 Score = 37.5 bits (86), Expect = 0.95, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Query: 11 ENLIKILARIPGFGPRSARRATL-----HLVKKKEQLLGPLAEAMAN 52 E +I+ ++ +P GP++A + +L + E + + M Sbjct: 281 ERVIQAISALPTIGPKTAAKLVQTYGESYLAEILENNVQAFSNLMDE 327 >gi|299135919|ref|ZP_07029103.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX8] gi|298602043|gb|EFI58197.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX8] Length = 198 Score = 37.5 bits (86), Expect = 0.95, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L +IPG G ++A R L L Sbjct: 110 LTKIPGIGKKTAERVVLEL 128 >gi|146306303|ref|YP_001186768.1| Holliday junction DNA helicase motor protein [Pseudomonas mendocina ymp] gi|145574504|gb|ABP84036.1| Holliday junction DNA helicase subunit RuvA [Pseudomonas mendocina ymp] Length = 202 Score = 37.5 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 8/35 (22%) Query: 5 ITGKEIENLIK--------ILARIPGFGPRSARRA 31 ++G E++ L++ L ++PG G ++A R Sbjct: 91 MSGLEVDELVRCVQAQDTAALTKVPGVGKKTAERL 125 >gi|261350674|ref|ZP_05976091.1| putative SAP domain protein [Methanobrevibacter smithii DSM 2374] gi|288861457|gb|EFC93755.1| putative SAP domain protein [Methanobrevibacter smithii DSM 2374] Length = 435 Score = 37.5 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 37/190 (19%) Query: 34 HLVKKKEQLLGPLAEAMANIYNKVCLCSIC--GNVDTTDPCAIC--------------ID 77 H+V KE L + N+ N + C C T C C D Sbjct: 78 HIVPSKELLAKKELVFLLNLKNNITFCPDCQSRLFLTDKFCYKCGAKNTQSIAIKAPNED 137 Query: 78 QQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVK 137 + + + Y + ++ DI L ++ Sbjct: 138 DLNLDEIYCAKLYEKYPLDFKYAYICFLRY--INQHPGEMEYGAFNDIDGFKLKKQAVED 195 Query: 138 KIRELIFAISATIEGQTTAHYIMDKLKGIDVKIT--------RLAYGIPMGSELDYLDDG 189 + + T I LK ++K++ R++ + D+ Sbjct: 196 NY--ITYGNPVYSISNYTISDIKKVLKKYNLKVSGKKDELIERISQNLS--------DEE 245 Query: 190 TIFEAIRSRT 199 I +RT Sbjct: 246 -ISREFENRT 254 >gi|194766770|ref|XP_001965497.1| GF22525 [Drosophila ananassae] gi|190619488|gb|EDV35012.1| GF22525 [Drosophila ananassae] Length = 703 Score = 37.5 bits (86), Expect = 0.98, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 14 IKILARIPGFGPRSARRAT 32 +K L ++PG GP++A Sbjct: 648 VKELKKLPGIGPKTAASLA 666 >gi|119774975|ref|YP_927715.1| Holliday junction DNA helicase RuvA [Shewanella amazonensis SB2B] gi|166200259|sp|A1S6N9|RUVA_SHEAM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|119767475|gb|ABM00046.1| Holliday junction DNA helicase RuvA [Shewanella amazonensis SB2B] Length = 205 Score = 37.5 bits (86), Expect = 0.98, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLIKLPGVGKKTAERL---LVEMRDKL 132 >gi|312135650|ref|YP_004002988.1| Radical SAM domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775701|gb|ADQ05188.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL] Length = 415 Score = 37.5 bits (86), Expect = 0.99, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%) Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54 + L R+PG G +SARR H + + L + + Sbjct: 320 EELIRVPGVGIKSARRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361 >gi|307822050|ref|ZP_07652282.1| helix-hairpin-helix DNA-binding, class 1 [Methylobacter tundripaludum SV96] gi|307736616|gb|EFO07461.1| helix-hairpin-helix DNA-binding, class 1 [Methylobacter tundripaludum SV96] Length = 297 Score = 37.5 bits (86), Expect = 0.99, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Query: 1 MQKKITGKEIENL------IKILARIPGFGPRSARRAT--LHLVKKKEQLLGPLAEA 49 M +++ +E+L I + +IPG GPRSA R LH+ LA Sbjct: 76 MTGRMS--RLESLQSGHDPIALFEQIPGIGPRSAHRIIETLHI---DTLEALELAAH 127 >gi|294054968|ref|YP_003548626.1| Holliday junction DNA helicase RuvA [Coraliomargarita akajimensis DSM 45221] gi|293614301|gb|ADE54456.1| Holliday junction DNA helicase RuvA [Coraliomargarita akajimensis DSM 45221] Length = 199 Score = 37.5 bits (86), Expect = 0.99, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 +++ ++ I +L++ PG G ++A R + L Sbjct: 92 SRMSVNVLQAAIASSDVALLSKCPGIGKKTAERLVIEL 129 >gi|260913921|ref|ZP_05920395.1| DNA-directed DNA polymerase IV [Pasteurella dagmatis ATCC 43325] gi|260632008|gb|EEX50185.1| DNA-directed DNA polymerase IV [Pasteurella dagmatis ATCC 43325] Length = 357 Score = 37.5 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Query: 5 ITGKEIENLIKIL--ARIPGFGPRSARRAT 32 I +E+ + IK L +IPG G +A+R Sbjct: 166 IKPEEVTDFIKKLPLKKIPGVGKVTAQRLA 195 >gi|139438977|ref|ZP_01772437.1| Hypothetical protein COLAER_01443 [Collinsella aerofaciens ATCC 25986] gi|133775688|gb|EBA39508.1| Hypothetical protein COLAER_01443 [Collinsella aerofaciens ATCC 25986] Length = 206 Score = 37.5 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 +A++PG G ++A+R L L Sbjct: 110 MAKVPGVGKKTAQRLILEL 128 >gi|297520077|ref|ZP_06938463.1| Holliday junction DNA helicase RuvA [Escherichia coli OP50] Length = 108 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKE 40 + L ++PG G ++A R +V+ K+ Sbjct: 12 VGALVKLPGIGKKTAERL---IVEMKD 35 >gi|157375170|ref|YP_001473770.1| Holliday junction DNA helicase RuvA [Shewanella sediminis HAW-EB3] gi|189045772|sp|A8FUW9|RUVA_SHESH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|157317544|gb|ABV36642.1| Holliday junction DNA helicase RuvA [Shewanella sediminis HAW-EB3] Length = 205 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|253751213|ref|YP_003024354.1| ATP-dependent DNA helicase [Streptococcus suis SC84] gi|253753114|ref|YP_003026254.1| ATP-dependent DNA helicase [Streptococcus suis P1/7] gi|253754936|ref|YP_003028076.1| ATP-dependent DNA helicase [Streptococcus suis BM407] gi|251815502|emb|CAZ51080.1| ATP-dependent DNA helicase [Streptococcus suis SC84] gi|251817400|emb|CAZ55136.1| ATP-dependent DNA helicase [Streptococcus suis BM407] gi|251819359|emb|CAR44751.1| ATP-dependent DNA helicase [Streptococcus suis P1/7] gi|292557775|gb|ADE30776.1| ATP-dependent DNA helicase RecG [Streptococcus suis GZ1] gi|319757485|gb|ADV69427.1| ATP-dependent DNA helicase [Streptococcus suis JS14] Length = 672 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 12 NLIKILARIPGFGPRSARRA 31 L L+ +PG GP+SA + Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22 >gi|146320180|ref|YP_001199891.1| RecG-like helicase [Streptococcus suis 98HAH33] gi|145690986|gb|ABP91491.1| RecG-like helicase [Streptococcus suis 98HAH33] Length = 635 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 12 NLIKILARIPGFGPRSARRA 31 L L+ +PG GP+SA + Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22 >gi|223933446|ref|ZP_03625431.1| ATP-dependent DNA helicase RecG [Streptococcus suis 89/1591] gi|330832178|ref|YP_004401003.1| ATP-dependent DNA helicase [Streptococcus suis ST3] gi|223897884|gb|EEF64260.1| ATP-dependent DNA helicase RecG [Streptococcus suis 89/1591] gi|329306401|gb|AEB80817.1| ATP-dependent DNA helicase [Streptococcus suis ST3] Length = 672 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 12 NLIKILARIPGFGPRSARRA 31 L L+ +PG GP+SA + Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22 >gi|289641361|ref|ZP_06473526.1| Holliday junction DNA helicase RuvA [Frankia symbiont of Datisca glomerata] gi|289508823|gb|EFD29757.1| Holliday junction DNA helicase RuvA [Frankia symbiont of Datisca glomerata] Length = 264 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 L ++PG G + A+R L L Sbjct: 108 ALTKVPGIGRKGAQRIVLDL 127 >gi|288923988|ref|ZP_06418058.1| DNA recombination protein RuvA domain I [Frankia sp. EUN1f] gi|288344666|gb|EFC79125.1| DNA recombination protein RuvA domain I [Frankia sp. EUN1f] Length = 217 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 L ++PG G + A+R L L Sbjct: 108 ALTKVPGIGRKGAQRIVLDL 127 >gi|254482531|ref|ZP_05095770.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium HTCC2148] gi|214037222|gb|EEB77890.1| Holliday junction DNA helicase RuvA [marine gamma proteobacterium HTCC2148] Length = 204 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 I L +PG G ++A R LV+ +++L L + Sbjct: 107 ISSLVALPGVGKKTAERL---LVEMRDKLKDWLGQ 138 >gi|146317997|ref|YP_001197709.1| RecG-like helicase [Streptococcus suis 05ZYH33] gi|145688803|gb|ABP89309.1| RecG-like helicase [Streptococcus suis 05ZYH33] Length = 542 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 12 NLIKILARIPGFGPRSARRA 31 L L+ +PG GP+SA + Sbjct: 3 RLCDELSVLPGIGPKSAEKF 22 >gi|111221574|ref|YP_712368.1| Holliday junction DNA helicase RuvA [Frankia alni ACN14a] gi|111149106|emb|CAJ60789.1| Holliday junction DNA helicase RuvA [Frankia alni ACN14a] Length = 252 Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 L ++PG G + A+R L L Sbjct: 108 ALTKVPGIGRKGAQRIVLDL 127 >gi|255281765|ref|ZP_05346320.1| holliday junction DNA helicase RuvA [Bryantella formatexigens DSM 14469] gi|255267832|gb|EET61037.1| holliday junction DNA helicase RuvA [Bryantella formatexigens DSM 14469] Length = 202 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 IK ++ PG G ++A++ L L K K L + +A Sbjct: 107 IKAISAAPGIGKKTAQKLILEL-KDKFSLQDTFEQKLAE 144 >gi|302874957|ref|YP_003843590.1| Holliday junction DNA helicase RuvA [Clostridium cellulovorans 743B] gi|307690425|ref|ZP_07632871.1| Holliday junction DNA helicase RuvA [Clostridium cellulovorans 743B] gi|302577814|gb|ADL51826.1| Holliday junction DNA helicase RuvA [Clostridium cellulovorans 743B] Length = 194 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + + PG G ++A+R L L K K PL+ NI V + Sbjct: 110 ITKAPGIGKKTAQRIILEL-KDKLSKEVPLSHTSENIITNVYVDE 153 >gi|289812335|ref|ZP_06542964.1| Holliday junction DNA helicase RuvA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 47 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 1 MSAQQFVNAVEREELGALVKLPGIGKKTAERL---IVEMKD 38 >gi|73540190|ref|YP_294710.1| Holliday junction DNA helicase motor protein [Ralstonia eutropha JMP134] gi|90135661|sp|Q475R7|RUVA_RALEJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|72117603|gb|AAZ59866.1| Holliday junction DNA helicase subunit RuvA [Ralstonia eutropha JMP134] Length = 193 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 ++ E+ I + L R+PG G ++A R L L Sbjct: 93 MSVSELAQAITLQEAGRLTRVPGIGKKTAERLMLEL 128 >gi|157164589|ref|YP_001466908.1| holliday junction DNA helicase RuvA [Campylobacter concisus 13826] gi|166230532|sp|A7ZDQ0|RUVA_CAMC1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|112800289|gb|EAT97633.1| holliday junction DNA helicase RuvA [Campylobacter concisus 13826] Length = 184 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRA 31 ++ + N I +PG GP++ARR Sbjct: 91 SSLSSQAFTNAIISGDADTFKSVPGIGPKTARRI 124 >gi|152970923|ref|YP_001336032.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206580323|ref|YP_002237747.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae 342] gi|238895438|ref|YP_002920173.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae NTUH-K2044] gi|262041978|ref|ZP_06015160.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288934605|ref|YP_003438664.1| Holliday junction DNA helicase RuvA [Klebsiella variicola At-22] gi|290508806|ref|ZP_06548177.1| Holliday junction DNA helicase RuvA [Klebsiella sp. 1_1_55] gi|330001163|ref|ZP_08303909.1| Holliday junction DNA helicase RuvA [Klebsiella sp. MS 92-3] gi|166230560|sp|A6TB31|RUVA_KLEP7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226698734|sp|B5XQ04|RUVA_KLEP3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|150955772|gb|ABR77802.1| Holliday junction DNA helicase motor protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206569381|gb|ACI11157.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae 342] gi|238547755|dbj|BAH64106.1| Holliday junction DNA helicase motor protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040676|gb|EEW41765.1| Holliday junction DNA helicase RuvA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288889314|gb|ADC57632.1| Holliday junction DNA helicase RuvA [Klebsiella variicola At-22] gi|289778200|gb|EFD86197.1| Holliday junction DNA helicase RuvA [Klebsiella sp. 1_1_55] gi|328537774|gb|EGF63974.1| Holliday junction DNA helicase RuvA [Klebsiella sp. MS 92-3] Length = 203 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVASLVKLPGIGKKTAERL---IVEMKD 130 >gi|289422389|ref|ZP_06424235.1| holliday junction DNA helicase RuvA [Peptostreptococcus anaerobius 653-L] gi|289157224|gb|EFD05843.1| holliday junction DNA helicase RuvA [Peptostreptococcus anaerobius 653-L] Length = 207 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 +I I + + +++ PG G ++A R +++ K+++ + + + + Sbjct: 94 PARIQSIIINSDVTAMSKAPGVGKKTAERI---ILELKDKVGKIVIDGLDTM 142 >gi|166363769|ref|YP_001656042.1| Holliday junction DNA helicase RuvA [Microcystis aeruginosa NIES-843] gi|189045757|sp|B0JRV0|RUVA_MICAN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166086142|dbj|BAG00850.1| holliday junction DNA helicase [Microcystis aeruginosa NIES-843] Length = 209 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 8/34 (23%) Query: 10 IENLI--------KILARIPGFGPRSARRATLHL 35 IE L+ KIL++ PG G ++A R L L Sbjct: 101 IEELVVAIVTGNTKILSKTPGVGLKTAERIALEL 134 >gi|225181939|ref|ZP_03735373.1| Holliday junction DNA helicase RuvA [Dethiobacter alkaliphilus AHT 1] gi|225167379|gb|EEG76196.1| Holliday junction DNA helicase RuvA [Dethiobacter alkaliphilus AHT 1] Length = 200 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L R+PG GP+SA+R + L Sbjct: 107 VKALTRVPGVGPKSAKRLIVEL 128 >gi|307826389|ref|ZP_07656591.1| Holliday junction DNA helicase RuvA [Methylobacter tundripaludum SV96] gi|307732566|gb|EFO03441.1| Holliday junction DNA helicase RuvA [Methylobacter tundripaludum SV96] Length = 203 Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L R+PG G ++A R Sbjct: 107 TQALVRLPGVGKKTAERLV 125 >gi|114047572|ref|YP_738122.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-7] gi|117920401|ref|YP_869593.1| Holliday junction DNA helicase RuvA [Shewanella sp. ANA-3] gi|123326531|sp|Q0HUZ0|RUVA_SHESR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166200264|sp|A0KWL8|RUVA_SHESA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|113889014|gb|ABI43065.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-7] gi|117612733|gb|ABK48187.1| Holliday junction DNA helicase RuvA [Shewanella sp. ANA-3] Length = 205 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|113970239|ref|YP_734032.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-4] gi|123029678|sp|Q0HIZ2|RUVA_SHESM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|113884923|gb|ABI38975.1| Holliday junction DNA helicase RuvA [Shewanella sp. MR-4] Length = 205 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|24373977|ref|NP_718020.1| Holliday junction DNA helicase RuvA [Shewanella oneidensis MR-1] gi|38372487|sp|Q8EEF2|RUVA_SHEON RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|24348428|gb|AAN55464.1|AE015684_1 Holliday junction DNA helicase RuvA [Shewanella oneidensis MR-1] Length = 205 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|307245098|ref|ZP_07527191.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254053|ref|ZP_07535900.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258509|ref|ZP_07540246.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853987|gb|EFM86199.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862978|gb|EFM94925.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867413|gb|EFM99264.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 201 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRA 31 ++ + N ++ L +IPG G ++A R Sbjct: 91 SAMSVSQFANAVEHEELAKLTKIPGIGRKTAERL 124 >gi|256823080|ref|YP_003147043.1| Holliday junction DNA helicase RuvA [Kangiella koreensis DSM 16069] gi|256796619|gb|ACV27275.1| Holliday junction DNA helicase RuvA [Kangiella koreensis DSM 16069] Length = 205 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 11/18 (61%) Query: 14 IKILARIPGFGPRSARRA 31 + L ++PG G ++A R Sbjct: 108 VDRLVKLPGVGKKTAERL 125 >gi|222529905|ref|YP_002573787.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456752|gb|ACM61014.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 415 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 7/54 (12%) Query: 6 TGKEIENLI-KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54 EI + L R+PG G +SA+R H + + L + + Sbjct: 310 FPIEINKASYEQLIRVPGIGIKSAKRIIKNRVFHSL--DFEDLKKMGVVLKRAK 361 >gi|190149554|ref|YP_001968079.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249558|ref|ZP_07335765.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251815|ref|ZP_07533717.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307262875|ref|ZP_07544499.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|229470525|sp|B3H0C5|RUVA_ACTP7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189914685|gb|ACE60937.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302651632|gb|EFL81781.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860722|gb|EFM92733.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306871780|gb|EFN03500.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 201 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRA 31 ++ + N ++ L +IPG G ++A R Sbjct: 91 SAMSVSQFANAVEHEELAKLTKIPGIGRKTAERL 124 >gi|46143844|ref|ZP_00133975.2| COG0632: Holliday junction resolvasome, DNA-binding subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207771|ref|YP_001052996.1| Holliday junction DNA helicase RuvA [Actinobacillus pleuropneumoniae L20] gi|303252521|ref|ZP_07338684.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247270|ref|ZP_07529319.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249498|ref|ZP_07531486.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307256311|ref|ZP_07538094.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260744|ref|ZP_07542433.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|166229626|sp|A3MZ05|RUVA_ACTP2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|126096563|gb|ABN73391.1| holliday junction ATP-dependent DNA helicase RuvA [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302648489|gb|EFL78682.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856243|gb|EFM88397.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858491|gb|EFM90559.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306865137|gb|EFM97037.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869583|gb|EFN01371.1| Holliday junction DNA helicase motor protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 201 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRA 31 ++ + N ++ L +IPG G ++A R Sbjct: 91 SAMSVSQFANAVENEELAKLTKIPGIGRKTAERL 124 >gi|269956459|ref|YP_003326248.1| Holliday junction DNA helicase RuvA [Xylanimonas cellulosilytica DSM 15894] gi|269305140|gb|ACZ30690.1| Holliday junction DNA helicase RuvA [Xylanimonas cellulosilytica DSM 15894] Length = 207 Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L R+PG GP+ A+R L L Sbjct: 106 VKALTRVPGIGPKVAQRILLEL 127 >gi|237809451|ref|YP_002893891.1| Holliday junction DNA helicase RuvA [Tolumonas auensis DSM 9187] gi|259495658|sp|C4LBN1|RUVA_TOLAT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|237501712|gb|ACQ94305.1| Holliday junction DNA helicase RuvA [Tolumonas auensis DSM 9187] Length = 206 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + L ++PG G ++A R +V+ K++L G ++ + Sbjct: 107 VSSLVKLPGVGKKTAERL---IVEMKDRLKGWISHDL 140 >gi|197105718|ref|YP_002131095.1| transcriptional regulator, AraC family [Phenylobacterium zucineum HLK1] gi|196479138|gb|ACG78666.1| transcriptional regulator, AraC family [Phenylobacterium zucineum HLK1] Length = 501 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 ++++ I L +PG G +A+ L +++ + G + + ++ Sbjct: 405 DLDSAIAALKALPGVGEWTAQYIALRELREPDAFPGADIALLRAMADETGRRPT 458 >gi|163751784|ref|ZP_02159001.1| Holliday junction DNA helicase RuvA [Shewanella benthica KT99] gi|161328348|gb|EDP99508.1| Holliday junction DNA helicase RuvA [Shewanella benthica KT99] Length = 205 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IATLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|81427980|ref|YP_394979.1| Holliday junction DNA helicase RuvA [Lactobacillus sakei subsp. sakei 23K] gi|90135183|sp|Q38YR0|RUVA_LACSS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|78609621|emb|CAI54667.1| Holliday junction DNA helicase RuvA [Lactobacillus sakei subsp. sakei 23K] Length = 203 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L + PG G ++A++ L L Sbjct: 106 IGYLTKFPGVGKKTAQQIALDL 127 >gi|220935403|ref|YP_002514302.1| DNA recombination protein, RuvA [Thioalkalivibrio sp. HL-EbGR7] gi|254767396|sp|B8GUJ5|RUVA_THISH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|219996713|gb|ACL73315.1| DNA recombination protein, RuvA [Thioalkalivibrio sp. HL-EbGR7] Length = 201 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L R+PG G ++A R Sbjct: 107 VASLVRLPGIGRKTAERLV 125 >gi|119489537|ref|ZP_01622298.1| Holliday junction DNA helicase motor protein [Lyngbya sp. PCC 8106] gi|119454616|gb|EAW35763.1| Holliday junction DNA helicase motor protein [Lyngbya sp. PCC 8106] Length = 211 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 K+LA+ PG G ++A+R L L Sbjct: 112 TKVLAKTPGVGTKTAQRIALEL 133 >gi|298490292|ref|YP_003720469.1| GAF sensor signal transduction histidine kinase ['Nostoc azollae' 0708] gi|298232210|gb|ADI63346.1| GAF sensor signal transduction histidine kinase ['Nostoc azollae' 0708] Length = 677 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 21/160 (13%) Query: 19 RIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQ 78 R+PG P R L +++ + L + + Sbjct: 465 RLPGITPERQTRY-LDILESECTKEINLINDLLTLQKLETH-------QEAPQLETIDLN 516 Query: 79 QRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKK 138 R ++ VE L + H+ L I D +Q L+ + Sbjct: 517 TRIKDLVAAVERPLAERGLSVNI------HLPKKPLKLQTEIESFDRILQELLTNVNKYS 570 Query: 139 IRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIP 178 R+ I + AT H + +L + +K+T + GI Sbjct: 571 ERDTIVNLQAT-------HRVEQELDQVIIKVTNIGRGIS 603 >gi|87118957|ref|ZP_01074855.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MED121] gi|86165348|gb|EAQ66615.1| Holliday junction DNA helicase RuvA [Marinomonas sp. MED121] Length = 199 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Query: 3 KKITGKEI-----ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 ++ E+ ++ + L RIPG G ++A R +++ +++L + + Sbjct: 91 SSMSSDELIANVQDSDVTALTRIPGVGKKTAERL---IIELRDKLGQAAKQDL 140 >gi|163738342|ref|ZP_02145757.1| Holliday junction DNA helicase motor protein [Phaeobacter gallaeciensis BS107] gi|161388263|gb|EDQ12617.1| Holliday junction DNA helicase motor protein [Phaeobacter gallaeciensis BS107] Length = 229 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 G GP++A+R L L K K + + +A+ + L Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGTIADAMDGPGLD 152 >gi|163742241|ref|ZP_02149629.1| Holliday junction DNA helicase motor protein [Phaeobacter gallaeciensis 2.10] gi|161384571|gb|EDQ08952.1| Holliday junction DNA helicase motor protein [Phaeobacter gallaeciensis 2.10] Length = 229 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 22 GFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLC 60 G GP++A+R L L K K + + +A+ + L Sbjct: 115 GVGPKTAQRIVLDL-KDKAPGVMAMGGTIADAMDGPGLD 152 >gi|187479251|ref|YP_787276.1| Holliday junction DNA helicase RuvA [Bordetella avium 197N] gi|123765963|sp|Q2KVY6|RUVA_BORA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|115423838|emb|CAJ50389.1| holliday junction DNA helicase [Bordetella avium 197N] Length = 190 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 8/47 (17%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 ++ E+ I + L R+PG G ++A R L++ + +L + Sbjct: 93 MSVAELAQAITLQESGRLTRVPGIGKKTAERL---LLEMRGKLGADI 136 >gi|33152771|ref|NP_874124.1| Holliday junction DNA helicase motor protein [Haemophilus ducreyi 35000HP] gi|38372436|sp|Q7VKV4|RUVA_HAEDU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|33148995|gb|AAP96513.1| Holliday junction DNA helicase RuvA [Haemophilus ducreyi 35000HP] Length = 201 Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Query: 11 ENLIKILARIPGFGPRSARRA 31 E L+K L +IPG G ++A R Sbjct: 105 EELVK-LTKIPGVGRKTAERL 124 >gi|90022179|ref|YP_528006.1| Holliday junction DNA helicase subunit RuvA [Saccharophagus degradans 2-40] gi|122996073|sp|Q21HN5|RUVA_SACD2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|89951779|gb|ABD81794.1| Holliday junction DNA helicase subunit RuvA [Saccharophagus degradans 2-40] Length = 207 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 8/43 (18%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKE 40 + + + L ++PG G ++A R LV ++ Sbjct: 90 MSMESSDFAKCVLDGNLTALVKLPGVGKKTAERL---LVDMRD 129 >gi|114330310|ref|YP_746532.1| Holliday junction DNA helicase RuvA [Nitrosomonas eutropha C91] gi|122314644|sp|Q0AJA4|RUVA_NITEC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|114307324|gb|ABI58567.1| Holliday junction DNA helicase subunit RuvA [Nitrosomonas eutropha C91] Length = 194 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 L +IPG G ++A R L L + P+A ++ Sbjct: 110 LTKIPGIGKKTAERLLLEL----RDKIDPVA-ILSEA 141 >gi|312143984|ref|YP_003995430.1| Holliday junction DNA helicase RuvA [Halanaerobium sp. 'sapolanicus'] gi|311904635|gb|ADQ15076.1| Holliday junction DNA helicase RuvA [Halanaerobium sp. 'sapolanicus'] Length = 200 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Query: 11 ENLIKILARIPGFGPRSARRATLHL 35 L+ L +I G GP++A+R L L Sbjct: 104 NELV--LKKISGIGPKTAQRLILEL 126 >gi|302872363|ref|YP_003840999.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302575222|gb|ADL43013.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 415 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 6/44 (13%) Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54 + L R+PG G +SARR H ++ + L + + Sbjct: 320 EELIRVPGIGIKSARRIIKNRVFHSLE--FEDLKKMGVVLKRAK 361 >gi|328473203|gb|EGF44051.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus 10329] Length = 204 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|323495172|ref|ZP_08100257.1| Holliday junction DNA helicase RuvA [Vibrio brasiliensis LMG 20546] gi|323310612|gb|EGA63791.1| Holliday junction DNA helicase RuvA [Vibrio brasiliensis LMG 20546] Length = 205 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|308125357|ref|ZP_05774780.2| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus K5030] gi|308113231|gb|EFO50771.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus K5030] Length = 223 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 126 VSTLVKLPGVGKKTAERLV 144 >gi|269967685|ref|ZP_06181735.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus 40B] gi|269827772|gb|EEZ82056.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus 40B] Length = 234 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 138 VSTLVKLPGVGKKTAERLV 156 >gi|262394694|ref|YP_003286548.1| holliday junction DNA helicase RuvA [Vibrio sp. Ex25] gi|262338288|gb|ACY52083.1| holliday junction DNA helicase RuvA [Vibrio sp. Ex25] Length = 203 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|260898721|ref|ZP_05907217.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus Peru-466] gi|308089527|gb|EFO39222.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus Peru-466] Length = 147 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|153839740|ref|ZP_01992407.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus AQ3810] gi|149746738|gb|EDM57726.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus AQ3810] Length = 204 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|91227614|ref|ZP_01261918.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus 12G01] gi|91188507|gb|EAS74800.1| Holliday junction DNA helicase motor protein [Vibrio alginolyticus 12G01] Length = 203 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|28897825|ref|NP_797430.1| Holliday junction DNA helicase RuvA [Vibrio parahaemolyticus RIMD 2210633] gi|260876984|ref|ZP_05889339.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus AN-5034] gi|260901352|ref|ZP_05909747.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus AQ4037] gi|31076902|sp|Q87QU8|RUVA_VIBPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|28806038|dbj|BAC59314.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus RIMD 2210633] gi|308093747|gb|EFO43442.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus AN-5034] gi|308109588|gb|EFO47128.1| holliday junction DNA helicase RuvA [Vibrio parahaemolyticus AQ4037] Length = 204 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSTLVKLPGVGKKTAERLV 125 >gi|149277483|ref|ZP_01883624.1| Holliday junction DNA helicase [Pedobacter sp. BAL39] gi|149231716|gb|EDM37094.1| Holliday junction DNA helicase [Pedobacter sp. BAL39] Length = 194 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M IT EI+ I ++ RI G G +SA+R L L Sbjct: 88 MLSSITPIEIQTAIVNGDLPLIQRIKGIGAKSAQRLVLEL 127 >gi|161510997|ref|YP_087904.2| Holliday junction DNA helicase motor protein [Mannheimia succiniciproducens MBEL55E] gi|88941980|sp|Q65UP1|RUVA_MANSM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA Length = 204 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ E I+ L+++ PG G ++A R Sbjct: 91 SAMSVNEFAYAIEHEELSKLVKIPGVGKKTAERL 124 >gi|126174263|ref|YP_001050412.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS155] gi|153000824|ref|YP_001366505.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS185] gi|160875532|ref|YP_001554848.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS195] gi|217973219|ref|YP_002357970.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS223] gi|304408864|ref|ZP_07390485.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS183] gi|307302867|ref|ZP_07582622.1| Holliday junction DNA helicase RuvA [Shewanella baltica BA175] gi|166200260|sp|A3D480|RUVA_SHEB5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166200261|sp|A6WNQ3|RUVA_SHEB8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045769|sp|A9L3H8|RUVA_SHEB9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254767386|sp|B8EA74|RUVA_SHEB2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|125997468|gb|ABN61543.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS155] gi|151365442|gb|ABS08442.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS185] gi|160861054|gb|ABX49588.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS195] gi|217498354|gb|ACK46547.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS223] gi|304352685|gb|EFM17082.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS183] gi|306913227|gb|EFN43649.1| Holliday junction DNA helicase RuvA [Shewanella baltica BA175] gi|315267720|gb|ADT94573.1| Holliday junction DNA helicase RuvA [Shewanella baltica OS678] Length = 205 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|257456050|ref|ZP_05621253.1| holliday junction DNA helicase RuvA [Treponema vincentii ATCC 35580] gi|257446508|gb|EEV21548.1| holliday junction DNA helicase RuvA [Treponema vincentii ATCC 35580] Length = 202 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L IPG G ++A++ L L Sbjct: 107 VARLQSIPGIGKKTAQKMVLAL 128 >gi|94499176|ref|ZP_01305714.1| DNA polymerase IV [Oceanobacter sp. RED65] gi|94428808|gb|EAT13780.1| DNA polymerase IV [Oceanobacter sp. RED65] Length = 366 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Query: 7 GKEIENLIKIL--ARIPGFGPRSARRAT 32 + + ++ L +IPG GP+SA + Sbjct: 163 PQALNEFVRTLPVGKIPGVGPKSAEKLA 190 >gi|187734464|ref|YP_001883298.1| IS1294, transposase [Shigella boydii CDC 3083-94] gi|187426960|gb|ACD06235.1| IS1294, transposase [Shigella boydii CDC 3083-94] Length = 394 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 204 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 261 Query: 174 AYGIPMGSELD--YLDDGT 190 A+ +G+ L+ YLD T Sbjct: 262 AH-YNVGASLNFRYLDHKT 279 >gi|120598878|ref|YP_963452.1| Holliday junction DNA helicase RuvA [Shewanella sp. W3-18-1] gi|146293036|ref|YP_001183460.1| Holliday junction DNA helicase RuvA [Shewanella putrefaciens CN-32] gi|166200263|sp|A4Y6S8|RUVA_SHEPC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166200265|sp|A1RJQ3|RUVA_SHESW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|120558971|gb|ABM24898.1| Holliday junction DNA helicase RuvA [Shewanella sp. W3-18-1] gi|145564726|gb|ABP75661.1| Holliday junction DNA helicase RuvA [Shewanella putrefaciens CN-32] gi|319426434|gb|ADV54508.1| Holliday junction DNA helicase RuvA [Shewanella putrefaciens 200] Length = 205 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQL 42 I L ++PG G ++A R LV+ +++L Sbjct: 107 IVTLVKLPGVGKKTAERL---LVEMRDKL 132 >gi|187734346|ref|YP_001883143.1| IS1294, transposase [Shigella boydii CDC 3083-94] gi|187426842|gb|ACD06117.1| IS1294, transposase [Shigella boydii CDC 3083-94] Length = 402 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AYGIPMGSELD--YLDDGT 190 A+ +G+ L+ YLD T Sbjct: 270 AH-YNVGASLNFRYLDHKT 287 >gi|187734340|ref|YP_001883289.1| IS1294, transposase [Shigella boydii CDC 3083-94] gi|187426836|gb|ACD06111.1| IS1294, transposase [Shigella boydii CDC 3083-94] Length = 399 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AYGIPMGSELD--YLDDGT 190 A+ +G+ L+ YLD T Sbjct: 267 AH-YNVGASLNFRYLDHKT 284 >gi|187730874|ref|YP_001882470.1| IS1294, transposase [Shigella boydii CDC 3083-94] gi|187427866|gb|ACD07140.1| IS1294, transposase [Shigella boydii CDC 3083-94] Length = 399 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AYGIPMGSELD--YLDDGT 190 A+ +G+ L+ YLD T Sbjct: 267 AH-YNVGASLNFRYLDHKT 284 >gi|289523150|ref|ZP_06440004.1| holliday junction DNA helicase RuvA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503693|gb|EFD24857.1| holliday junction DNA helicase RuvA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 196 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 12/21 (57%) Query: 15 KILARIPGFGPRSARRATLHL 35 + L ++PG G ++A R L Sbjct: 107 EKLEKVPGVGRKTAERICFEL 127 >gi|52306819|gb|AAU37319.1| RuvA protein [Mannheimia succiniciproducens MBEL55E] Length = 215 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ E I+ L+++ PG G ++A R Sbjct: 102 SAMSVNEFAYAIEHEELSKLVKIPGVGKKTAERL 135 >gi|292490335|ref|YP_003525774.1| Holliday junction DNA helicase RuvA [Nitrosococcus halophilus Nc4] gi|291578930|gb|ADE13387.1| Holliday junction DNA helicase RuvA [Nitrosococcus halophilus Nc4] Length = 199 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVC 58 L R+PG G ++A R +V+ +++L E MA + +V Sbjct: 109 SLTRLPGVGKKTAERL---IVEMRDRLFDGPREEMAGVLPRVG 148 >gi|85712318|ref|ZP_01043369.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina baltica OS145] gi|85693945|gb|EAQ31892.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina baltica OS145] Length = 206 Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 + L ++PG G ++A R Sbjct: 107 VSRLVKLPGVGKKTAERLV 125 >gi|319947801|ref|ZP_08021995.1| Holliday junction DNA helicase RuvA [Dietzia cinnamea P4] gi|319438525|gb|EFV93451.1| Holliday junction DNA helicase RuvA [Dietzia cinnamea P4] Length = 199 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L +PG G R+A R L L Sbjct: 106 VKALTLVPGVGKRTAERMVLEL 127 >gi|332993889|gb|AEF03944.1| Holliday junction DNA helicase motor protein [Alteromonas sp. SN2] Length = 206 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L +PG G ++A R + L Sbjct: 107 VSALVSLPGIGKKTAERLVVEL 128 >gi|251793066|ref|YP_003007792.1| Holliday junction DNA helicase RuvA [Aggregatibacter aphrophilus NJ8700] gi|247534459|gb|ACS97705.1| holliday junction DNA helicase RuvA [Aggregatibacter aphrophilus NJ8700] Length = 204 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ E I+ L+R+ PG G ++A R Sbjct: 91 SAMSVDEFAYAIEREELSRLVKIPGIGKKTAERL 124 >gi|239995979|ref|ZP_04716503.1| Holliday junction DNA helicase motor protein [Alteromonas macleodii ATCC 27126] Length = 206 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L +PG G ++A R + L Sbjct: 107 VSALVSLPGIGKKTAERLVVEL 128 >gi|13475376|ref|NP_106940.1| hypothetical protein mll6426 [Mesorhizobium loti MAFF303099] gi|14026128|dbj|BAB52726.1| mll6426 [Mesorhizobium loti MAFF303099] Length = 289 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 6/49 (12%) Query: 13 LIKILARIPGFGPRSARRATLHLVKKKE--QLLGPLAEAMANIYNKVCL 59 L L R+PG GP++A +V+ + + L + + + Sbjct: 166 LRDALTRLPGIGPKTAS----WVVRNRRASDEVAILDIHIVRACVHMGI 210 >gi|313901534|ref|ZP_07834979.1| ATP-dependent DNA helicase RecG [Thermaerobacter subterraneus DSM 13965] gi|313468195|gb|EFR63664.1| ATP-dependent DNA helicase RecG [Thermaerobacter subterraneus DSM 13965] Length = 930 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 10/16 (62%) Query: 17 LARIPGFGPRSARRAT 32 L R+PG G R A+R Sbjct: 219 LGRLPGVGRRQAQRLA 234 >gi|289548999|ref|YP_003473987.1| DNA topoisomerase I [Thermocrinis albus DSM 14484] gi|289182616|gb|ADC89860.1| DNA topoisomerase I [Thermocrinis albus DSM 14484] Length = 539 Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITR 172 +K + EG+ A+++ + LK + K+ R Sbjct: 70 QKCESIYIGTDPDREGEAIAYFLWNLLKPLGKKLYR 105 >gi|329769669|ref|ZP_08261073.1| Holliday junction DNA helicase RuvA [Gemella sanguinis M325] gi|328838424|gb|EGF88033.1| Holliday junction DNA helicase RuvA [Gemella sanguinis M325] Length = 192 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T +EI + I+ L + PG G +SA++ L L Sbjct: 91 TSEEIISAIEKQDAVYLTKFPGIGKKSAQQIILDL 125 >gi|317495143|ref|ZP_07953513.1| Holliday junction DNA helicase RuvA [Gemella moribillum M424] gi|316914565|gb|EFV36041.1| Holliday junction DNA helicase RuvA [Gemella moribillum M424] Length = 192 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T +EI + I+ L + PG G +SA++ L L Sbjct: 91 TSEEIISAIEKQDVNYLTKFPGIGKKSAQQIILDL 125 >gi|188591242|ref|YP_001795842.1| holliday junction DNA helicase ruva [Cupriavidus taiwanensis LMG 19424] gi|229560026|sp|B2AH73|RUVA_CUPTR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|170938136|emb|CAP63122.1| subunit A of RuvABC Holliday junction resolvasome, regulatory subunit [Cupriavidus taiwanensis LMG 19424] Length = 193 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ E+ I + L RIPG G ++A R Sbjct: 93 MSVPELAQAITLQEAGRLTRIPGIGKKTAER 123 >gi|145632564|ref|ZP_01788298.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 3655] gi|229845014|ref|ZP_04465151.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 6P18H1] gi|144986759|gb|EDJ93311.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 3655] gi|229812148|gb|EEP47840.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 6P18H1] Length = 204 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|113866527|ref|YP_725016.1| Holliday junction DNA helicase RuvA [Ralstonia eutropha H16] gi|123033276|sp|Q0KEC3|RUVA_RALEH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|113525303|emb|CAJ91648.1| holliday junction resolvasome, DNA-binding subunit RuvA [Ralstonia eutropha H16] Length = 193 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ E+ I + L RIPG G ++A R Sbjct: 93 MSVPELAQAITLQEAGRLTRIPGIGKKTAER 123 >gi|330898196|gb|EGH29615.1| CorA-like Mg2+ transporter protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 331 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 E LI++L + G GP+SA LHL + + L + Sbjct: 130 EELIELLGQ--GKGPKSASELILHLAQHLTDKVQDLVGELTE 169 >gi|302185652|ref|ZP_07262325.1| Mg2+ transporter protein, CorA-like [Pseudomonas syringae pv. syringae 642] Length = 331 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 E LI++L + G GP+SA LHL + + L + Sbjct: 130 EELIELLGQ--GKGPKSASELILHLAQHLTDKVQDLVGELTE 169 >gi|332670539|ref|YP_004453547.1| Holliday junction DNA helicase RuvA [Cellulomonas fimi ATCC 484] gi|332339577|gb|AEE46160.1| Holliday junction DNA helicase RuvA [Cellulomonas fimi ATCC 484] Length = 204 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 L R+PG G + A+R L L Sbjct: 108 ALMRVPGIGRKGAQRIVLEL 127 >gi|329893679|ref|ZP_08269813.1| Holliday junction DNA helicase RuvA [gamma proteobacterium IMCC3088] gi|328923606|gb|EGG30918.1| Holliday junction DNA helicase RuvA [gamma proteobacterium IMCC3088] Length = 205 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 + L +PG G ++A R +V+ +++L L++ Sbjct: 107 VSALVALPGVGKKTAERL---IVEMRDRLGDWLSQ 138 >gi|312792987|ref|YP_004025910.1| Radical SAM domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180127|gb|ADQ40297.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 415 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 6/44 (13%) Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIY 54 + L R+PG G +SA+R H + + L + + Sbjct: 320 EELIRVPGIGIKSAKRIIKNRVFHSL--DFEDLKKIGVVLKRAK 361 >gi|282916910|ref|ZP_06324668.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus D139] gi|283770716|ref|ZP_06343608.1| Holliday junction ATP-dependent DNA helicase ruvA [Staphylococcus aureus subsp. aureus H19] gi|282319397|gb|EFB49749.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus D139] gi|283460863|gb|EFC07953.1| Holliday junction ATP-dependent DNA helicase ruvA [Staphylococcus aureus subsp. aureus H19] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|269941127|emb|CBI49513.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus TW20] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|258424067|ref|ZP_05686949.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9635] gi|294848671|ref|ZP_06789417.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9754] gi|257845688|gb|EEV69720.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9635] gi|294824697|gb|EFG41120.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9754] Length = 203 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 96 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 130 >gi|257793715|ref|ZP_05642694.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9781] gi|258410986|ref|ZP_05681266.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9763] gi|258420213|ref|ZP_05683168.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9719] gi|258438215|ref|ZP_05689499.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus A9299] gi|258443678|ref|ZP_05692017.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8115] gi|258446885|ref|ZP_05695039.1| Holliday junction DNA helicase [Staphylococcus aureus A6300] gi|258448799|ref|ZP_05696911.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus A6224] gi|295406763|ref|ZP_06816568.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8819] gi|297245654|ref|ZP_06929519.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8796] gi|257787687|gb|EEV26027.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9781] gi|257840136|gb|EEV64600.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9763] gi|257843924|gb|EEV68318.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9719] gi|257848259|gb|EEV72250.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus A9299] gi|257851084|gb|EEV75027.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8115] gi|257854460|gb|EEV77409.1| Holliday junction DNA helicase [Staphylococcus aureus A6300] gi|257858077|gb|EEV80966.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus A6224] gi|294968510|gb|EFG44534.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8819] gi|297177305|gb|EFH36557.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8796] Length = 203 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 96 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 130 >gi|257431064|ref|ZP_05607443.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 68-397] gi|257433750|ref|ZP_05610108.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus E1410] gi|257436665|ref|ZP_05612709.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M876] gi|257278267|gb|EEV08909.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 68-397] gi|257281843|gb|EEV11980.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus E1410] gi|257284016|gb|EEV14139.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M876] Length = 203 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 96 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 130 >gi|253732298|ref|ZP_04866463.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724087|gb|EES92816.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|221141089|ref|ZP_03565582.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751470|gb|ADL65647.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|123966300|ref|YP_001011381.1| helix-hairpin-helix DNA-binding motif-containing protein [Prochlorococcus marinus str. MIT 9515] gi|123200666|gb|ABM72274.1| Helix-hairpin-helix DNA-binding motif class 1 [Prochlorococcus marinus str. MIT 9515] Length = 110 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 2/23 (8%) Query: 12 NLIKILARIPGFGPRSARRATLH 34 LI+ L IPG G +SA + Sbjct: 54 KLIEALKAIPGVGAKSAE--AFY 74 >gi|57650523|ref|YP_186536.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus COL] gi|82751240|ref|YP_416981.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus RF122] gi|87160146|ref|YP_494293.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195453|ref|YP_500257.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221756|ref|YP_001332578.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus str. Newman] gi|161509868|ref|YP_001575527.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253733107|ref|ZP_04867272.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus TCH130] gi|258450532|ref|ZP_05698594.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5948] gi|262048631|ref|ZP_06021514.1| holliday junction DNA helicase [Staphylococcus aureus D30] gi|262051292|ref|ZP_06023516.1| holliday junction DNA helicase [Staphylococcus aureus 930918-3] gi|282920191|ref|ZP_06327916.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9765] gi|284024698|ref|ZP_06379096.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 132] gi|304380761|ref|ZP_07363429.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|71153735|sp|Q5HFC1|RUVA_STAAC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123098028|sp|Q2FXT3|RUVA_STAA8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123740965|sp|Q2YT88|RUVA_STAAB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123763287|sp|Q2FG85|RUVA_STAA3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|172048928|sp|A6QHI4|RUVA_STAAE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045775|sp|A8Z2H0|RUVA_STAAT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|57284709|gb|AAW36803.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus COL] gi|82656771|emb|CAI81200.1| Holliday junction DNA helicase [Staphylococcus aureus RF122] gi|87126120|gb|ABD20634.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203011|gb|ABD30821.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374556|dbj|BAF67816.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus str. Newman] gi|160368677|gb|ABX29648.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253728863|gb|EES97592.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus TCH130] gi|257861690|gb|EEV84489.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5948] gi|259160929|gb|EEW45949.1| holliday junction DNA helicase [Staphylococcus aureus 930918-3] gi|259163278|gb|EEW47837.1| holliday junction DNA helicase [Staphylococcus aureus D30] gi|282594539|gb|EFB99524.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A9765] gi|283470918|emb|CAQ50129.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus ST398] gi|298694921|gb|ADI98143.1| Holliday junction DNA helicase [Staphylococcus aureus subsp. aureus ED133] gi|302333315|gb|ADL23508.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus subsp. aureus JKD6159] gi|304340698|gb|EFM06630.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198657|gb|EFU28985.1| crossover junction endodeoxyribonuclease [Staphylococcus aureus subsp. aureus CGS01] gi|320140471|gb|EFW32325.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MRSA131] gi|320144010|gb|EFW35779.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MRSA177] gi|323440805|gb|EGA98514.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus O11] gi|323442846|gb|EGB00471.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus O46] gi|329314316|gb|AEB88729.1| Holliday junction ATP-dependent DNA helicase ruvA [Staphylococcus aureus subsp. aureus T0131] gi|329728425|gb|EGG64862.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 21189] gi|329733154|gb|EGG69491.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 21193] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|49483886|ref|YP_041110.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MRSA252] gi|257425766|ref|ZP_05602190.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 55/2053] gi|257428426|ref|ZP_05604824.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 65-1322] gi|282904222|ref|ZP_06312110.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus C160] gi|282906048|ref|ZP_06313903.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus Btn1260] gi|282908961|ref|ZP_06316779.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911278|ref|ZP_06319080.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus WBG10049] gi|282914447|ref|ZP_06322233.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M899] gi|282919416|ref|ZP_06327151.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus C427] gi|282924793|ref|ZP_06332459.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus C101] gi|283958402|ref|ZP_06375853.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus A017934/97] gi|293503520|ref|ZP_06667367.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 58-424] gi|293510539|ref|ZP_06669244.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M809] gi|293537082|ref|ZP_06671762.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M1015] gi|295428217|ref|ZP_06820849.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590815|ref|ZP_06949453.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus MN8] gi|56749557|sp|Q6GG62|RUVA_STAAR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|49242015|emb|CAG40713.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MRSA252] gi|257271460|gb|EEV03606.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 55/2053] gi|257275267|gb|EEV06754.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 65-1322] gi|282313159|gb|EFB43555.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus C101] gi|282317226|gb|EFB47600.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus C427] gi|282321628|gb|EFB51953.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M899] gi|282324973|gb|EFB55283.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus WBG10049] gi|282327225|gb|EFB57520.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331340|gb|EFB60854.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus Btn1260] gi|282595840|gb|EFC00804.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus C160] gi|283790551|gb|EFC29368.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus A017934/97] gi|290919927|gb|EFD96995.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M1015] gi|291095186|gb|EFE25451.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 58-424] gi|291466430|gb|EFF08951.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus M809] gi|295128575|gb|EFG58209.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575701|gb|EFH94417.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus MN8] gi|312437891|gb|ADQ76962.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus TCH60] gi|315195545|gb|EFU25932.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus CGS00] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|15924632|ref|NP_372166.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus Mu50] gi|15927222|ref|NP_374755.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus N315] gi|21283321|ref|NP_646409.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MW2] gi|49486475|ref|YP_043696.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MSSA476] gi|148268122|ref|YP_001247065.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus JH9] gi|150394190|ref|YP_001316865.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus JH1] gi|156979960|ref|YP_001442219.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus Mu3] gi|253317207|ref|ZP_04840420.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006427|ref|ZP_05145028.2| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258453755|ref|ZP_05701730.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5937] gi|269203267|ref|YP_003282536.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus ED98] gi|282893146|ref|ZP_06301380.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8117] gi|282928277|ref|ZP_06335882.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A10102] gi|296275927|ref|ZP_06858434.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MR1] gi|297207637|ref|ZP_06924072.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911720|ref|ZP_07129163.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus TCH70] gi|54039574|sp|P66749|RUVA_STAAN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|54039575|sp|P66750|RUVA_STAAW RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|54042203|sp|P66748|RUVA_STAAM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|56749510|sp|Q6G8S7|RUVA_STAAS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166200268|sp|A7X358|RUVA_STAA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045773|sp|A6U2B0|RUVA_STAA2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|189045774|sp|A5ITG6|RUVA_STAA9 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|13701440|dbj|BAB42734.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus N315] gi|14247414|dbj|BAB57804.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus Mu50] gi|21204761|dbj|BAB95457.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus MW2] gi|49244918|emb|CAG43379.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus MSSA476] gi|147741191|gb|ABQ49489.1| Holliday junction DNA helicase subunit RuvA [Staphylococcus aureus subsp. aureus JH9] gi|149946642|gb|ABR52578.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus JH1] gi|156722095|dbj|BAF78512.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus Mu3] gi|257864075|gb|EEV86828.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A5937] gi|262075557|gb|ACY11530.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus ED98] gi|282590084|gb|EFB95166.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A10102] gi|282764464|gb|EFC04590.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus A8117] gi|285817324|gb|ADC37811.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus 04-02981] gi|296887654|gb|EFH26552.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300885966|gb|EFK81168.1| crossover junction ATP-dependent DNA helicase RuvA [Staphylococcus aureus subsp. aureus TCH70] gi|312830028|emb|CBX34870.1| holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129927|gb|EFT85917.1| holliday junction DNA helicase [Staphylococcus aureus subsp. aureus CGS03] gi|329727620|gb|EGG64076.1| Holliday junction DNA helicase RuvA [Staphylococcus aureus subsp. aureus 21172] Length = 200 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 6 TGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 T E++ I+ L + PG G ++AR+ L L Sbjct: 93 TPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDL 127 >gi|260893478|ref|YP_003239575.1| Holliday junction DNA helicase RuvA [Ammonifex degensii KC4] gi|260865619|gb|ACX52725.1| Holliday junction DNA helicase RuvA [Ammonifex degensii KC4] Length = 193 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 8/43 (18%) Query: 8 KEIENLI--KILARI---PGFGPRSARRATLHLVKKKEQLLGP 45 +E+ I + L ++ PG G ++ARR L++ KE+ P Sbjct: 96 EELREAIRSEDLEKLTVVPGVGKKTARRL---LLELKEEKGAP 135 >gi|146296053|ref|YP_001179824.1| radical SAM domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409629|gb|ABP66633.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 415 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 6/49 (12%) Query: 15 KILARIPGFGPRSARRA----TLHLVKKKEQLLGPLAEAMANIYNKVCL 59 + L R+PG G +SARR H + L + + + Sbjct: 319 EELIRVPGIGIKSARRIIKNRVFHSL--DFDDLKKIGVVLKRAKFFITC 365 >gi|325579043|ref|ZP_08148999.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus parainfluenzae ATCC 33392] gi|325159278|gb|EGC71412.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus parainfluenzae ATCC 33392] Length = 203 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLVKIPGVGKKTAERL 124 >gi|117618729|ref|YP_855686.1| DNA polymerase IV [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|189027655|sp|A0KHD5|DPO4_AERHH RecName: Full=DNA polymerase IV; Short=Pol IV gi|117560136|gb|ABK37084.1| DNA polymerase IV [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 350 Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Query: 7 GKEIENLIKIL--ARIPGFGPRSARRA 31 +E++ ++ L ++PG G ++A R Sbjct: 166 PQEVDEFVRQLPLGKLPGIGRKTADRL 192 >gi|262042831|ref|ZP_06015981.1| ISPsy3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039823|gb|EEW40944.1| ISPsy3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDPKT 287 >gi|149375111|ref|ZP_01892883.1| Holliday junction DNA helicase motor protein [Marinobacter algicola DG893] gi|149360475|gb|EDM48927.1| Holliday junction DNA helicase motor protein [Marinobacter algicola DG893] Length = 210 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 3/30 (10%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLG 44 L ++PG G ++A R L++ +++ Sbjct: 108 NALVKLPGVGKKTAERL---LIEMTDRIGQ 134 >gi|134098596|ref|YP_001104257.1| Holliday junction DNA helicase RuvA [Saccharopolyspora erythraea NRRL 2338] gi|291008207|ref|ZP_06566180.1| Holliday junction DNA helicase RuvA [Saccharopolyspora erythraea NRRL 2338] gi|166200258|sp|A4FBA7|RUVA_SACEN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|133911219|emb|CAM01332.1| Holliday junction DNA helicase [Saccharopolyspora erythraea NRRL 2338] Length = 200 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L ++PG G +SA R L L Sbjct: 106 ITTLTQVPGVGKKSAERLILEL 127 >gi|240949538|ref|ZP_04753878.1| Holliday junction DNA helicase RuvA [Actinobacillus minor NM305] gi|240296111|gb|EER46772.1| Holliday junction DNA helicase RuvA [Actinobacillus minor NM305] Length = 200 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK-----ILARIPGFGPRSARRA 31 ++ + N ++ L +IPG G ++A R Sbjct: 91 SAMSVSQFANAVENEELAKLTKIPGIGRKTAERL 124 >gi|293390518|ref|ZP_06634852.1| holliday junction DNA helicase RuvA [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951052|gb|EFE01171.1| holliday junction DNA helicase RuvA [Aggregatibacter actinomycetemcomitans D7S-1] Length = 204 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ E I+ L+R+ PG G ++A R Sbjct: 91 SAMSVDEFAYAIEREELSRLVKIPGIGKKTAERL 124 >gi|198413061|ref|XP_002124717.1| PREDICTED: similar to predicted protein, partial [Ciona intestinalis] Length = 183 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 17/28 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M K+ G +I ++ L ++PG GP+ A Sbjct: 69 MMKEEFGGDIPKCVESLVKLPGVGPKMA 96 >gi|254431586|ref|ZP_05045289.1| Holliday junction DNA helicase RuvA [Cyanobium sp. PCC 7001] gi|197626039|gb|EDY38598.1| Holliday junction DNA helicase RuvA [Cyanobium sp. PCC 7001] Length = 214 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 9/44 (20%) Query: 1 MQKKITGK-EIENLIKI-----LARI---PGFGPRSARRATLHL 35 M + G E+E L++ L R+ PG G R+A R + L Sbjct: 89 MAMGLLGALEMEELVQAIVQPDLRRLCQAPGVGKRTAERLAVEL 132 >gi|145636553|ref|ZP_01792221.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittHH] gi|145270378|gb|EDK10313.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittHH] Length = 204 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|195566235|ref|XP_002106692.1| GD17033 [Drosophila simulans] gi|194204078|gb|EDX17654.1| GD17033 [Drosophila simulans] Length = 213 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 14 IKILARIPGFGPRSARRATLH 34 +K L IPG GP+SA LH Sbjct: 158 VKQLQEIPGIGPKSAFSLALH 178 >gi|56460194|ref|YP_155475.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina loihiensis L2TR] gi|81363131|sp|Q5QYU4|RUVA_IDILO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|56179204|gb|AAV81926.1| Holliday junction resolvasome, DNA-binding subunit [Idiomarina loihiensis L2TR] Length = 205 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 6/30 (20%), Positives = 14/30 (46%), Gaps = 4/30 (13%) Query: 3 KKITGKEIENLIKILARIPGFGPRSARRAT 32 + ++ L+ ++PG G ++A R Sbjct: 100 MAVNQNDVTRLV----KLPGVGKKTAERLV 125 >gi|56751811|ref|YP_172512.1| Holliday junction DNA helicase RuvA [Synechococcus elongatus PCC 6301] gi|81301107|ref|YP_401315.1| Holliday junction DNA helicase RuvA [Synechococcus elongatus PCC 7942] gi|81561725|sp|Q5N128|RUVA_SYNP6 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123769196|sp|Q31KU1|RUVA_SYNE7 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|56686770|dbj|BAD79992.1| holliday junction DNA helicase RuvA [Synechococcus elongatus PCC 6301] gi|81169988|gb|ABB58328.1| Holliday junction DNA helicase subunit RuvA [Synechococcus elongatus PCC 7942] Length = 207 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Query: 16 ILARIPGFGPRSARRATL----HLVKKKEQ 41 +L+R PG G ++A R L L + +E+ Sbjct: 113 LLSRTPGVGAKTAERLALELRSKLAEWREE 142 >gi|24641330|ref|NP_511125.2| no distributive disjunction [Drosophila melanogaster] gi|128497|sp|P18105|NOD_DROME RecName: Full=Kinesin-like protein Nod gi|157780|gb|AAA28653.1| kinesin-like protein (nod) [Drosophila melanogaster] gi|157974|gb|AAC14452.1| kinesin-like protein [Drosophila melanogaster] gi|15150427|gb|AAK84937.1| SD02282p [Drosophila melanogaster] gi|22833096|gb|AAF48064.2| no distributive disjunction [Drosophila melanogaster] Length = 666 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 14 IKILARIPGFGPRSARRATLH 34 +K L IPG GP+SA LH Sbjct: 611 VKQLQEIPGIGPKSAFSLALH 631 >gi|322437324|ref|YP_004219536.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX9] gi|321165051|gb|ADW70756.1| Holliday junction DNA helicase RuvA [Acidobacterium sp. MP5ACTX9] Length = 196 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 8/33 (24%) Query: 11 ENLIKILA--------RIPGFGPRSARRATLHL 35 + L+ + +IPG G ++A R L L Sbjct: 96 DRLVTAIRGGDHDTLVKIPGIGKKTAERVVLEL 128 >gi|227875448|ref|ZP_03993589.1| Holliday junction DNA helicase motor protein [Mobiluncus mulieris ATCC 35243] gi|269977300|ref|ZP_06184273.1| holliday junction DNA helicase RuvA [Mobiluncus mulieris 28-1] gi|306818760|ref|ZP_07452482.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus mulieris ATCC 35239] gi|307701010|ref|ZP_07638035.1| Holliday junction DNA helicase RuvA [Mobiluncus mulieris FB024-16] gi|227844002|gb|EEJ54170.1| Holliday junction DNA helicase motor protein [Mobiluncus mulieris ATCC 35243] gi|269934603|gb|EEZ91164.1| holliday junction DNA helicase RuvA [Mobiluncus mulieris 28-1] gi|304648446|gb|EFM45749.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus mulieris ATCC 35239] gi|307614005|gb|EFN93249.1| Holliday junction DNA helicase RuvA [Mobiluncus mulieris FB024-16] Length = 193 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 17 LARIPGFGPRSARRATLHL 35 L RIPG G +SA R +L + Sbjct: 109 LQRIPGVGKKSAERMSLEI 127 >gi|307153472|ref|YP_003888856.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7822] gi|306983700|gb|ADN15581.1| Holliday junction DNA helicase RuvA [Cyanothece sp. PCC 7822] Length = 209 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 +E L++ LA+ PG GP++A R L L Sbjct: 101 LEELVRAIMSNNGRTLAKSPGIGPKTAERILLEL 134 >gi|332092362|gb|EGI97436.1| transposase for insertion sequence element IS801 domain protein [Shigella dysenteriae 155-74] Length = 259 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 170 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 227 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 228 AHYNG---GASLSFRYLDHKT 245 >gi|332084903|gb|EGI90086.1| transposase [Shigella boydii 5216-82] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|332084880|gb|EGI90063.1| transposase [Shigella boydii 5216-82] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYKG---GASLSFRYLDHKT 287 >gi|323181264|gb|EFZ66763.1| transposase for insertion sequence element IS801 [Escherichia coli 1357] Length = 361 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|320185665|gb|EFW60425.1| IS1294 transposase [Shigella flexneri CDC 796-83] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|320180059|gb|EFW55001.1| IS1294 transposase [Shigella boydii ATCC 9905] gi|320182118|gb|EFW57022.1| hypothetical protein SGB_00691 [Shigella boydii ATCC 9905] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|320178927|gb|EFW53890.1| hypothetical protein SGB_04207 [Shigella boydii ATCC 9905] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|301029828|ref|ZP_07192871.1| transposase [Escherichia coli MS 196-1] gi|299877322|gb|EFI85533.1| transposase [Escherichia coli MS 196-1] Length = 399 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFCYLDHKT 284 >gi|218133570|ref|ZP_03462374.1| hypothetical protein BACPEC_01437 [Bacteroides pectinophilus ATCC 43243] gi|217990945|gb|EEC56951.1| hypothetical protein BACPEC_01437 [Bacteroides pectinophilus ATCC 43243] Length = 203 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Query: 14 IKILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEA 49 +K ++R PG G ++A+R + L +K +E L+ Sbjct: 108 VKAISRAPGIGAKTAQRMIIELKDKLKLEEAFEIRLSHE 146 >gi|302651689|ref|YP_003829070.1| IS26 transposase [Escherichia coli] gi|211639234|emb|CAR94634.1| transposase [Escherichia coli] gi|302310092|gb|ADL13964.1| TnpA [Escherichia coli] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|74314885|ref|YP_313303.1| IS1294 orf [Shigella sonnei Ss046] gi|74315055|ref|YP_313473.1| IS1294 orf [Shigella sonnei Ss046] gi|73858362|gb|AAZ91068.1| IS1294 ORF [Shigella sonnei Ss046] gi|73858532|gb|AAZ91238.1| IS1294 ORF [Shigella sonnei Ss046] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|74314899|ref|YP_313317.1| IS1294 orf [Shigella sonnei Ss046] gi|73858376|gb|AAZ91082.1| IS1294 ORF [Shigella sonnei Ss046] Length = 301 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|74314906|ref|YP_313324.1| IS1294 orf [Shigella sonnei Ss046] gi|73858383|gb|AAZ91089.1| IS1294 ORF [Shigella sonnei Ss046] Length = 304 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|22035184|gb|AAM14707.1| transposase [Escherichia coli] Length = 402 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 270 AHYNG---GASLSFRYLDHKT 287 >gi|225023395|ref|ZP_03712587.1| hypothetical protein EIKCOROL_00253 [Eikenella corrodens ATCC 23834] gi|224943873|gb|EEG25082.1| hypothetical protein EIKCOROL_00253 [Eikenella corrodens ATCC 23834] Length = 193 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 15 KILARIPGFGPRSARRATLHL 35 K L+ PG G ++A R L L Sbjct: 108 KRLSSAPGIGKKTAERMVLEL 128 >gi|320182831|gb|EFW57707.1| IS1294 transposase [Shigella flexneri CDC 796-83] Length = 399 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|145631439|ref|ZP_01787209.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae R3021] gi|144982976|gb|EDJ90485.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae R3021] Length = 204 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|188574078|ref|YP_001919254.1| transposase [Escherichia coli 53638] gi|188501253|gb|ACD54388.1| transposase [Escherichia coli 53638] Length = 360 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 170 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 227 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 228 AHYNG---GASLSFRYLDHKT 245 >gi|74314877|ref|YP_313295.1| IS1294 orf [Shigella sonnei Ss046] gi|74315044|ref|YP_313462.1| IS1294 orf [Shigella sonnei Ss046] gi|73858354|gb|AAZ91060.1| IS1294 ORF [Shigella sonnei Ss046] gi|73858521|gb|AAZ91227.1| IS1294 ORF [Shigella sonnei Ss046] Length = 399 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|16272267|ref|NP_438479.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae Rd KW20] gi|260581219|ref|ZP_05849038.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae RdAW] gi|1173330|sp|P44632|RUVA_HAEIN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|1573280|gb|AAC21976.1| Holliday junction DNA helicase (ruvA) [Haemophilus influenzae Rd KW20] gi|260092144|gb|EEW76088.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae RdAW] Length = 204 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|315923964|ref|ZP_07920192.1| crossover junction ATP-dependent DNA helicase RuvA [Pseudoramibacter alactolyticus ATCC 23263] gi|315622804|gb|EFV02757.1| crossover junction ATP-dependent DNA helicase RuvA [Pseudoramibacter alactolyticus ATCC 23263] Length = 231 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K +AR PG G ++A R L L Sbjct: 135 KAIARAPGIGKKTAERIILEL 155 >gi|91793239|ref|YP_562890.1| Holliday junction DNA helicase RuvA [Shewanella denitrificans OS217] gi|122968746|sp|Q12N09|RUVA_SHEDO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|91715241|gb|ABE55167.1| Holliday junction DNA helicase RuvA [Shewanella denitrificans OS217] Length = 203 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L ++PG G ++A R Sbjct: 107 IVTLVKLPGVGKKTAERLV 125 >gi|157418190|ref|YP_001481262.1| transposase [Escherichia coli APEC O1] gi|88770240|gb|ABD51677.1| transposase [Escherichia coli APEC O1] Length = 275 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 85 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 142 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 143 AHYNG---GASLSFRYLDHKT 160 >gi|320178056|gb|EFW53036.1| IS1294 transposase [Shigella boydii ATCC 9905] gi|320179095|gb|EFW54054.1| IS1294 transposase [Shigella boydii ATCC 9905] gi|320180071|gb|EFW55013.1| IS1294 transposase [Shigella boydii ATCC 9905] Length = 399 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|332092064|gb|EGI97142.1| transposase [Shigella boydii 3594-74] Length = 312 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 267 AHYNG---GASLNFRYLDHKT 284 >gi|320186465|gb|EFW61193.1| IS1294 transposase [Shigella flexneri CDC 796-83] Length = 307 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 267 AHYNG---GASLNFRYLDHKT 284 >gi|320178088|gb|EFW53068.1| IS1294 transposase [Shigella boydii ATCC 9905] Length = 399 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|320173980|gb|EFW49154.1| IS1294 transposase [Shigella dysenteriae CDC 74-1112] Length = 402 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 270 AHYNG---GASLNFRYLDHKT 287 >gi|261868502|ref|YP_003256424.1| Holliday junction DNA helicase RuvA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413834|gb|ACX83205.1| holliday junction DNA helicase RuvA [Aggregatibacter actinomycetemcomitans D11S-1] Length = 204 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ E I+ L+R+ PG G ++A R Sbjct: 91 SAMSVDEFAYAIEREELSRLVKIPGIGKKTAERL 124 >gi|254360614|ref|ZP_04976763.1| crossover junction endonuclease RuvA [Mannheimia haemolytica PHL213] gi|153091154|gb|EDN73159.1| crossover junction endonuclease RuvA [Mannheimia haemolytica PHL213] Length = 201 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M IEN + LA++ PG G ++A R Sbjct: 93 MSVSQFATAIEN--EELAKLTKIPGIGRKTAERL 124 >gi|82524799|ref|YP_406360.1| IS1294 transposase [Shigella boydii Sb227] gi|81248301|gb|ABB69008.1| IS1294 ORF [Shigella boydii Sb227] Length = 399 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 267 AHYNG---GASLNFRYLDHKT 284 >gi|82524802|ref|YP_406363.1| IS1294 transposase [Shigella boydii Sb227] gi|81248304|gb|ABB69011.1| IS1294 ORF [Shigella boydii Sb227] Length = 402 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 270 AHYNG---GASLNFRYLDHKT 287 >gi|82545242|ref|YP_409189.1| IS1294 transposase [Shigella boydii Sb227] gi|81246653|gb|ABB67361.1| IS1294 ORF [Shigella boydii Sb227] Length = 399 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 267 AHYNG---GASLNFRYLDHKT 284 >gi|82546040|ref|YP_409987.1| IS1294 transposase [Shigella boydii Sb227] gi|81247451|gb|ABB68159.1| IS1294 ORF [Shigella boydii Sb227] gi|320185539|gb|EFW60305.1| hypothetical protein SGF_02249 [Shigella flexneri CDC 796-83] gi|332089538|gb|EGI94642.1| transposase [Shigella boydii 3594-74] Length = 409 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 267 AHYNG---GASLNFRYLDHKT 284 >gi|188496271|ref|ZP_03003541.1| IS1294, transposase [Escherichia coli 53638] gi|188491470|gb|EDU66573.1| IS1294, transposase [Escherichia coli 53638] Length = 402 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 270 AHYNG---GASLNFRYLDHKT 287 >gi|309972527|gb|ADO95728.1| Holliday junction resolvasome, DNA-binding subunit [Haemophilus influenzae R2846] Length = 204 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|311279238|ref|YP_003941469.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae SCF1] gi|308748433|gb|ADO48185.1| Holliday junction DNA helicase RuvA [Enterobacter cloacae SCF1] Length = 203 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ + N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAAQFVNAVEREDPAALVKLPGIGKKTAERL---IVEMKD 130 >gi|319775819|ref|YP_004138307.1| holliday junction DNA helicase RuvA [Haemophilus influenzae F3047] gi|317450410|emb|CBY86626.1| holliday junction DNA helicase RuvA [Haemophilus influenzae F3047] Length = 204 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|148825408|ref|YP_001290161.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae PittEE] gi|229846401|ref|ZP_04466509.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 7P49H1] gi|166230556|sp|A5UAH7|RUVA_HAEIE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|148715568|gb|ABQ97778.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittEE] gi|229810494|gb|EEP46212.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae 7P49H1] Length = 204 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|323166391|gb|EFZ52158.1| transposase [Shigella sonnei 53G] Length = 464 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 274 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 331 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 332 AHYNG---GASLSFRYLDHKT 349 >gi|300088237|ref|YP_003758759.1| Holliday junction DNA helicase RuvA [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527970|gb|ADJ26438.1| Holliday junction DNA helicase RuvA [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 195 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 8/48 (16%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 +++ N+I +L +PG G ++A R L L K+++ + Sbjct: 92 FKPEDLANIIATGNADMLCTVPGVGKKTASRIVLEL---KDKVARNWS 136 >gi|86740076|ref|YP_480476.1| Holliday junction DNA helicase subunit RuvA [Frankia sp. CcI3] gi|86566938|gb|ABD10747.1| Holliday junction DNA helicase subunit RuvA [Frankia sp. CcI3] Length = 247 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG G + A+R L L Sbjct: 109 LTKVPGIGRKGAQRIVLDL 127 >gi|30248236|ref|NP_840306.1| Holliday junction DNA helicase subunit [Nitrosomonas europaea ATCC 19718] gi|44888448|sp|Q820S3|RUVA_NITEU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|30180121|emb|CAD84123.1| probable Holliday junction DNA helicase subunit [Nitrosomonas europaea ATCC 19718] Length = 195 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L RIPG G ++A R L L Sbjct: 110 LTRIPGIGKKTAERLLLEL 128 >gi|150390102|ref|YP_001320151.1| Holliday junction DNA helicase RuvA [Alkaliphilus metalliredigens QYMF] gi|167012654|sp|A6TQM4|RUVA_ALKMQ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|149949964|gb|ABR48492.1| Holliday junction DNA helicase RuvA [Alkaliphilus metalliredigens QYMF] Length = 194 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 + +A+ PG G ++A R L L Sbjct: 107 QAIAKSPGVGKKTAERMILEL 127 >gi|320174830|gb|EFW49953.1| Transposase [Shigella dysenteriae CDC 74-1112] Length = 399 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L+ YLD T Sbjct: 267 AHYNG---GASLNFRYLDHKT 284 >gi|296170845|ref|ZP_06852406.1| crossover junction ATP-dependent DNA helicase RuvA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894501|gb|EFG74242.1| crossover junction ATP-dependent DNA helicase RuvA [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 197 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VTALTRVPGIGKRGAERMVLEL 127 >gi|282892421|ref|ZP_06300771.1| hypothetical protein pah_c253o048 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497823|gb|EFB40184.1| hypothetical protein pah_c253o048 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 200 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L+++PG G ++A R + L Sbjct: 107 ITTLSKVPGVGKKTAERLIVEL 128 >gi|118467715|ref|YP_887263.1| Holliday junction DNA helicase RuvA [Mycobacterium smegmatis str. MC2 155] gi|166230568|sp|A0QWH5|RUVA_MYCS2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|118169002|gb|ABK69898.1| holliday junction DNA helicase RuvA [Mycobacterium smegmatis str. MC2 155] Length = 195 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VTALTRVPGIGKRGAERMVLEL 127 >gi|108799233|ref|YP_639430.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. MCS] gi|119868349|ref|YP_938301.1| Holliday junction DNA helicase motor protein [Mycobacterium sp. KMS] gi|126434891|ref|YP_001070582.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. JLS] gi|123369347|sp|Q1B9R0|RUVA_MYCSS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230569|sp|A3PYW4|RUVA_MYCSJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230570|sp|A1UFA3|RUVA_MYCSK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|108769652|gb|ABG08374.1| Holliday junction DNA helicase subunit RuvA [Mycobacterium sp. MCS] gi|119694438|gb|ABL91511.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. KMS] gi|126234691|gb|ABN98091.1| Holliday junction DNA helicase RuvA [Mycobacterium sp. JLS] Length = 196 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VTALTRVPGIGKRGAERMVLEL 127 >gi|86605208|ref|YP_473971.1| Holliday junction DNA helicase RuvA [Synechococcus sp. JA-3-3Ab] gi|123765632|sp|Q2JWZ2|RUVA_SYNJA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|86553750|gb|ABC98708.1| Holliday junction DNA helicase RuvA [Synechococcus sp. JA-3-3Ab] Length = 204 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 +++L+ PG G ++A+R L L + L + + N Sbjct: 110 VRLLSLTPGVGHKTAQRLALEL----KTKLAHWRQGLENA 145 >gi|240173173|ref|ZP_04751831.1| Holliday junction DNA helicase RuvA [Mycobacterium kansasii ATCC 12478] Length = 195 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VAALTRVPGIGKRGAERMVLEL 127 >gi|229597664|pdb|2ZTC|A Chain A, Mtruva Form Ii gi|229597665|pdb|2ZTC|B Chain B, Mtruva Form Ii gi|229597666|pdb|2ZTC|C Chain C, Mtruva Form Ii gi|229597667|pdb|2ZTC|D Chain D, Mtruva Form Ii gi|229597668|pdb|2ZTD|A Chain A, Mtruva Form Iii gi|229597669|pdb|2ZTD|B Chain B, Mtruva Form Iii gi|229597670|pdb|2ZTE|A Chain A, Mtruva Form Iv Length = 212 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 122 VAALTRVPGIGKRGAERMVLEL 143 >gi|215427996|ref|ZP_03425915.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis T92] gi|289751217|ref|ZP_06510595.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis T92] gi|289691804|gb|EFD59233.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis T92] Length = 196 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VAALTRVPGIGKRGAERMVLEL 127 >gi|213421561|ref|ZP_03354627.1| Holliday junction DNA helicase motor protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 105 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKE 40 E L L ++PG G ++A R +V+ K+ Sbjct: 7 EEL-GALVKLPGIGKKTAERL---IVEMKD 32 >gi|41407135|ref|NP_959971.1| Holliday junction DNA helicase motor protein [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465009|ref|YP_882656.1| Holliday junction DNA helicase RuvA [Mycobacterium avium 104] gi|81414560|sp|Q741Q1|RUVA_MYCPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230566|sp|A0QIB8|RUVA_MYCA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|41395486|gb|AAS03354.1| RuvA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166296|gb|ABK67193.1| holliday junction DNA helicase RuvA [Mycobacterium avium 104] Length = 199 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VAALTRVPGIGKRGAERMVLEL 127 >gi|15609730|ref|NP_217109.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis H37Rv] gi|15842133|ref|NP_337170.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis CDC1551] gi|31793777|ref|NP_856270.1| Holliday junction DNA helicase RuvA [Mycobacterium bovis AF2122/97] gi|121638478|ref|YP_978702.1| Holliday junction DNA helicase RuvA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662432|ref|YP_001283955.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis H37Ra] gi|148823788|ref|YP_001288542.1| Holliday junction DNA helicase motor protein [Mycobacterium tuberculosis F11] gi|167967067|ref|ZP_02549344.1| Holliday junction DNA helicase motor protein [Mycobacterium tuberculosis H37Ra] gi|215404543|ref|ZP_03416724.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis 02_1987] gi|215412369|ref|ZP_03421129.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis 94_M4241A] gi|215431548|ref|ZP_03429467.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis EAS054] gi|215446844|ref|ZP_03433596.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis T85] gi|218754331|ref|ZP_03533127.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis GM 1503] gi|219558597|ref|ZP_03537673.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis T17] gi|224990972|ref|YP_002645659.1| Holliday junction DNA helicase motor protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253798325|ref|YP_003031326.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN 1435] gi|254232711|ref|ZP_04926038.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis C] gi|254365262|ref|ZP_04981307.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis str. Haarlem] gi|254551644|ref|ZP_05142091.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187606|ref|ZP_05765080.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis CPHL_A] gi|260201721|ref|ZP_05769212.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis T46] gi|260205915|ref|ZP_05773406.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis K85] gi|289444132|ref|ZP_06433876.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis T46] gi|289448243|ref|ZP_06437987.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis CPHL_A] gi|289553618|ref|ZP_06442828.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN 605] gi|289570764|ref|ZP_06450991.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis T17] gi|289575303|ref|ZP_06455530.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis K85] gi|289746386|ref|ZP_06505764.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis 02_1987] gi|289754712|ref|ZP_06514090.1| holliday junction DNA helicase motor protein [Mycobacterium tuberculosis EAS054] gi|289758724|ref|ZP_06518102.1| holliday junction DNA helicase motor protein [Mycobacterium tuberculosis T85] gi|289762766|ref|ZP_06522144.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis GM 1503] gi|294994298|ref|ZP_06799989.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis 210] gi|297635203|ref|ZP_06952983.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis KZN 4207] gi|297732196|ref|ZP_06961314.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis KZN R506] gi|298526068|ref|ZP_07013477.1| holliday junction DNA helicase RuvA [Mycobacterium tuberculosis 94_M4241A] gi|306776867|ref|ZP_07415204.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu001] gi|306780631|ref|ZP_07418968.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu002] gi|306785395|ref|ZP_07423717.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu003] gi|306789995|ref|ZP_07428317.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu004] gi|306794076|ref|ZP_07432378.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu005] gi|306798490|ref|ZP_07436792.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu006] gi|306804353|ref|ZP_07441021.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu008] gi|306807607|ref|ZP_07444275.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu007] gi|306969809|ref|ZP_07482470.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu009] gi|306972982|ref|ZP_07485643.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu010] gi|307080692|ref|ZP_07489862.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu011] gi|307085281|ref|ZP_07494394.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu012] gi|313659531|ref|ZP_07816411.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis KZN V2475] gi|54039572|sp|P66745|RUVA_MYCBO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|54042201|sp|P66744|RUVA_MYCTU RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230567|sp|A1KLU1|RUVA_MYCBP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230571|sp|A5U5U3|RUVA_MYCTA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254767377|sp|C1AF62|RUVA_MYCBT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|114794219|pdb|2H5X|A Chain A, Ruva From Mycobacterium Tuberculosis gi|114794220|pdb|2H5X|B Chain B, Ruva From Mycobacterium Tuberculosis gi|114794221|pdb|2H5X|C Chain C, Ruva From Mycobacterium Tuberculosis gi|114794222|pdb|2H5X|D Chain D, Ruva From Mycobacterium Tuberculosis gi|1478219|emb|CAB01282.1| PROBABLE HOLLIDAY JUNCTION DNA HELICASE RUVA [Mycobacterium tuberculosis H37Rv] gi|13882417|gb|AAK46984.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis CDC1551] gi|31619371|emb|CAD94809.1| PROBABLE HOLLIDAY JUNCTION DNA HELICASE RUVA [Mycobacterium bovis AF2122/97] gi|121494126|emb|CAL72604.1| Probable holliday junction DNA helicase ruvA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601770|gb|EAY60780.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis C] gi|134150775|gb|EBA42820.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis str. Haarlem] gi|148506584|gb|ABQ74393.1| Holliday junction DNA helicase motor protein [Mycobacterium tuberculosis H37Ra] gi|148722315|gb|ABR06940.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis F11] gi|224774085|dbj|BAH26891.1| Holliday junction DNA helicase motor protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319828|gb|ACT24431.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN 1435] gi|289417051|gb|EFD14291.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis T46] gi|289421201|gb|EFD18402.1| Holliday junction DNA helicase RuvA [Mycobacterium tuberculosis CPHL_A] gi|289438250|gb|EFD20743.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN 605] gi|289539734|gb|EFD44312.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis K85] gi|289544518|gb|EFD48166.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis T17] gi|289686914|gb|EFD54402.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis 02_1987] gi|289695299|gb|EFD62728.1| holliday junction DNA helicase motor protein [Mycobacterium tuberculosis EAS054] gi|289710272|gb|EFD74288.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis GM 1503] gi|289714288|gb|EFD78300.1| holliday junction DNA helicase motor protein [Mycobacterium tuberculosis T85] gi|298495862|gb|EFI31156.1| holliday junction DNA helicase RuvA [Mycobacterium tuberculosis 94_M4241A] gi|308214722|gb|EFO74121.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu001] gi|308326462|gb|EFP15313.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu002] gi|308329914|gb|EFP18765.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu003] gi|308333529|gb|EFP22380.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu004] gi|308337556|gb|EFP26407.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu005] gi|308341223|gb|EFP30074.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu006] gi|308346003|gb|EFP34854.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu007] gi|308349030|gb|EFP37881.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu008] gi|308352726|gb|EFP41577.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu009] gi|308357598|gb|EFP46449.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu010] gi|308361540|gb|EFP50391.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu011] gi|308365151|gb|EFP54002.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis SUMu012] gi|323718789|gb|EGB27946.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis CDC1551A] gi|326904206|gb|EGE51139.1| Holliday junction DNA helicase ruvA [Mycobacterium tuberculosis W-148] gi|328458095|gb|AEB03518.1| holliday junction DNA helicase ruvA [Mycobacterium tuberculosis KZN 4207] Length = 196 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L R+PG G R A R L L Sbjct: 106 VAALTRVPGIGKRGAERMVLEL 127 >gi|327475176|gb|AEA77183.1| holliday junction DNA helicase [Exiguobacterium sp. EPVM] Length = 195 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKI--------LARIPGFGPRSARRATLHL 35 + +++ LI L + PG G ++A++ L L Sbjct: 88 VASGDMDALIDAIETENEKYLTKFPGVGKKTAKQMALDL 126 >gi|145634688|ref|ZP_01790397.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittAA] gi|145638774|ref|ZP_01794383.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittII] gi|148827465|ref|YP_001292218.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae PittGG] gi|260582589|ref|ZP_05850379.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae NT127] gi|166230557|sp|A5UGC9|RUVA_HAEIG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|145268233|gb|EDK08228.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittAA] gi|145272369|gb|EDK12277.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittII] gi|148718707|gb|ABQ99834.1| Holliday junction DNA helicase motor protein [Haemophilus influenzae PittGG] gi|260094400|gb|EEW78298.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae NT127] gi|301169022|emb|CBW28619.1| component of RuvABC resolvasome, regulatory subunit [Haemophilus influenzae 10810] gi|309750264|gb|ADO80248.1| Holliday junction resolvasome, DNA-binding subunit [Haemophilus influenzae R2866] Length = 204 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|327458866|gb|EGF05214.1| DNA helicase RecG [Streptococcus sanguinis SK1057] Length = 671 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 12 NLIKILARIPGFGPRSARRAT 32 NL + L +PG GP+SA + Sbjct: 2 NLHQSLTVLPGVGPKSAEKFA 22 >gi|258645438|ref|ZP_05732907.1| holliday junction DNA helicase RuvA [Dialister invisus DSM 15470] gi|260402789|gb|EEW96336.1| holliday junction DNA helicase RuvA [Dialister invisus DSM 15470] Length = 201 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 10/15 (66%) Query: 17 LARIPGFGPRSARRA 31 L ++PG G ++A R Sbjct: 109 LTKLPGVGKKTAERL 123 >gi|254445801|ref|ZP_05059277.1| Holliday junction DNA helicase RuvA [Verrucomicrobiae bacterium DG1235] gi|198260109|gb|EDY84417.1| Holliday junction DNA helicase RuvA [Verrucomicrobiae bacterium DG1235] Length = 205 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M K+ + + I +LA+ PG G ++A R + L Sbjct: 90 MMSKLELPSLISAIGNADAVLLAKTPGIGKKTAERVVIEL 129 >gi|152979457|ref|YP_001345086.1| Holliday junction DNA helicase motor protein [Actinobacillus succinogenes 130Z] gi|171704337|sp|A6VQA4|RUVA_ACTSZ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|150841180|gb|ABR75151.1| Holliday junction DNA helicase RuvA [Actinobacillus succinogenes 130Z] Length = 204 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M IE + L+++ PG G ++A R Sbjct: 93 MSVHEFAYAIER--EELSKLVKIPGVGKKTAERL 124 >gi|146312076|ref|YP_001177150.1| Holliday junction DNA helicase RuvA [Enterobacter sp. 638] gi|167012660|sp|A4WBL9|RUVA_ENT38 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|145318952|gb|ABP61099.1| Holliday junction DNA helicase subunit RuvA [Enterobacter sp. 638] Length = 203 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIK-----ILARIPGFGPRSARRATLHLVKKKE 40 ++ + N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAHQFVNAVEREDPAALIKLPGIGKKTAERL---IVEMKD 130 >gi|261493369|ref|ZP_05989895.1| crossover junction endonuclease RuvA [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496635|ref|ZP_05993015.1| crossover junction endonuclease RuvA [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307838|gb|EEY09161.1| crossover junction endonuclease RuvA [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311013|gb|EEY12190.1| crossover junction endonuclease RuvA [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 201 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M IEN + LA++ PG G ++A R Sbjct: 93 MSVSQFATAIEN--EELAKLTKIPGIGRKTAERL 124 >gi|15679455|ref|NP_276572.1| hypothetical protein MTH1458 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622572|gb|AAB85933.1| unknown [Methanothermobacter thermautotrophicus str. Delta H] Length = 392 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 1 MQKKITGKEIENL-IKILARIPGFGPRSARRA 31 M I ++E+ + R+PG GP+SARR Sbjct: 315 MDMDIFPVDLESAPYHEIIRVPGIGPKSARRI 346 >gi|315634723|ref|ZP_07890007.1| crossover junction ATP-dependent DNA helicase RuvA [Aggregatibacter segnis ATCC 33393] gi|315476671|gb|EFU67419.1| crossover junction ATP-dependent DNA helicase RuvA [Aggregatibacter segnis ATCC 33393] Length = 204 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLIK--ILARI---PGFGPRSARRA 31 ++ E I+ L+++ PG G ++A R Sbjct: 91 SAMSVDEFAYAIEREELSKLVKIPGVGKKTAERL 124 >gi|329123663|ref|ZP_08252223.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus aegyptius ATCC 11116] gi|327469862|gb|EGF15327.1| crossover junction ATP-dependent DNA helicase RuvA [Haemophilus aegyptius ATCC 11116] Length = 204 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|299533018|ref|ZP_07046405.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni S44] gi|298719242|gb|EFI60212.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni S44] Length = 191 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKILA--------RIPGFGPRSARRATLHL 35 ++G I++L ++ ++PG G ++A R L L Sbjct: 90 LSGMSIDDLADAVSQQQAGRLVKVPGIGKKTAERLLLEL 128 >gi|264680422|ref|YP_003280332.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni CNB-2] gi|262210938|gb|ACY35036.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni CNB-2] Length = 191 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKILA--------RIPGFGPRSARRATLHL 35 ++G I++L ++ ++PG G ++A R L L Sbjct: 90 LSGMSIDDLADAVSQQQAGRLVKVPGIGKKTAERLLLEL 128 >gi|221064959|ref|ZP_03541064.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni KF-1] gi|220709982|gb|EED65350.1| Holliday junction DNA helicase RuvA [Comamonas testosteroni KF-1] Length = 191 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 8/39 (20%) Query: 5 ITGKEIENLIKILA--------RIPGFGPRSARRATLHL 35 ++G I++L ++ ++PG G ++A R L L Sbjct: 90 LSGMSIDDLADAVSQQQAGRLVKVPGIGKKTAERLLLEL 128 >gi|320321308|gb|EFW77437.1| ISPsy3, transposase [Pseudomonas syringae pv. glycinea str. B076] Length = 398 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 11/82 (13%) Query: 111 GGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKI 170 ++ P + + + L+ + I T G+ T +Y+ LK + Sbjct: 205 HTTVPPENAHLQSENDWRHLVLNAGGQHWH--IHLSKKTKNGRKTVNYLGRYLKKPPISG 262 Query: 171 TRLAYGIPMGSELDYLDDGTIF 192 +RLA+ Y + T+ Sbjct: 263 SRLAH---------YTNSATLS 275 >gi|319896645|ref|YP_004134838.1| holliday junction DNA helicase ruva [Haemophilus influenzae F3031] gi|317432147|emb|CBY80498.1| holliday junction DNA helicase RuvA [Haemophilus influenzae F3031] Length = 204 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|68248920|ref|YP_248032.1| Holliday junction DNA helicase RuvA [Haemophilus influenzae 86-028NP] gi|81336669|sp|Q4QNM5|RUVA_HAEI8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|68057119|gb|AAX87372.1| holliday junction DNA helicase RuvA [Haemophilus influenzae 86-028NP] Length = 204 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M + IE + L+++ PG G ++A R Sbjct: 93 MSVEQFAYAIER--EELSKLTKIPGVGKKTAERL 124 >gi|162448567|ref|YP_001610934.1| holliday junction DNA helicase [Sorangium cellulosum 'So ce 56'] gi|161159149|emb|CAN90454.1| holliday junction DNA helicase [Sorangium cellulosum 'So ce 56'] Length = 244 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 17 LARIPGFGPRSARRATLHL 35 L IPG G ++A R L L Sbjct: 154 LTAIPGVGKKTAERLVLEL 172 >gi|320321382|gb|EFW77504.1| ISPsy3, transposase [Pseudomonas syringae pv. glycinea str. B076] Length = 398 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 11/82 (13%) Query: 111 GGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKI 170 ++ P + + + L+ + I T G+ T +Y+ LK + Sbjct: 205 HTTVPPENAHLQSENDWRHLVLNAGGQHWH--IHLSKKTKNGKKTVNYLGRYLKKPPISG 262 Query: 171 TRLAYGIPMGSELDYLDDGTIF 192 +RLA+ Y + T+ Sbjct: 263 SRLAH---------YTNSATLS 275 >gi|320321313|gb|EFW77442.1| ISPsy3, transposase [Pseudomonas syringae pv. glycinea str. B076] Length = 398 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 11/82 (13%) Query: 111 GGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKI 170 ++ P + + + L+ + I T G+ T +Y+ LK + Sbjct: 205 HTTVPPENAHLQSENDWRHLVLNAGGQHWH--IHLSKKTKNGKKTVNYLGRYLKKPPISG 262 Query: 171 TRLAYGIPMGSELDYLDDGTIF 192 +RLA+ Y + T+ Sbjct: 263 SRLAH---------YTNSATLS 275 >gi|302879788|ref|YP_003848352.1| Holliday junction DNA helicase RuvA [Gallionella capsiferriformans ES-2] gi|302582577|gb|ADL56588.1| Holliday junction DNA helicase RuvA [Gallionella capsiferriformans ES-2] Length = 193 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L +IPG G ++A R L L Sbjct: 110 LTKIPGVGKKTAERLLLEL 128 >gi|14488264|dbj|BAB60893.1| transposase [Pseudomonas syringae pv. eriobotryae] Length = 408 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 11/82 (13%) Query: 111 GGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKI 170 ++ P + + + L+ + I T G+ T +Y+ LK + Sbjct: 215 HTTVPPENAHLQSENDWRHLVLNAGGQHWH--IHLSKKTKNGKKTVNYLGRYLKKPPISG 272 Query: 171 TRLAYGIPMGSELDYLDDGTIF 192 +RLA+ Y + T+ Sbjct: 273 SRLAH---------YTNSATLS 285 >gi|332092303|gb|EGI97379.1| transposase domain protein [Shigella dysenteriae 155-74] Length = 233 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 43 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 100 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 101 AHYNG---GASLSFRYLDHKT 118 >gi|332638256|ref|ZP_08417119.1| Holliday junction DNA helicase RuvA [Weissella cibaria KACC 11862] Length = 199 Score = 36.4 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L + PG G ++A++ L L Sbjct: 104 ITFLTKFPGIGKKTAQQIVLDL 125 >gi|254490165|ref|ZP_05103356.1| Holliday junction DNA helicase RuvA [Methylophaga thiooxidans DMS010] gi|224464651|gb|EEF80909.1| Holliday junction DNA helicase RuvA [Methylophaga thiooxydans DMS010] Length = 198 Score = 36.4 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 10/16 (62%) Query: 16 ILARIPGFGPRSARRA 31 L R+PG G ++A R Sbjct: 109 SLTRLPGVGKKTAERL 124 >gi|225851116|ref|YP_002731350.1| holliday junction DNA helicase RuvA [Persephonella marina EX-H1] gi|225645836|gb|ACO04022.1| holliday junction DNA helicase RuvA [Persephonella marina EX-H1] Length = 179 Score = 36.4 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 I L G G ++A+R L L K + + L + + + + Sbjct: 100 ITTLTTAQGVGKKTAQRIVLELQGKLDFIENELLKDLVDALTGLGFDK 147 >gi|241895534|ref|ZP_04782830.1| Holliday junction DNA helicase RuvA [Weissella paramesenteroides ATCC 33313] gi|241871112|gb|EER74863.1| Holliday junction DNA helicase RuvA [Weissella paramesenteroides ATCC 33313] Length = 196 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I L + PG G ++A++ L L Sbjct: 104 IGFLTKFPGIGKKTAQQIVLDL 125 >gi|239907719|ref|YP_002954460.1| holliday junction DNA helicase RuvA [Desulfovibrio magneticus RS-1] gi|259495640|sp|C4XIJ9|RUVA_DESMR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|239797585|dbj|BAH76574.1| holliday junction DNA helicase RuvA [Desulfovibrio magneticus RS-1] Length = 202 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 15 KILARIPGFGPRSARRA 31 + L R+PG G +SA+R Sbjct: 109 EALVRVPGIGKKSAQRI 125 >gi|221134420|ref|ZP_03560725.1| Holliday junction DNA helicase RuvA [Glaciecola sp. HTCC2999] Length = 207 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L +IPG G ++A R + L Sbjct: 107 VSSLVKIPGVGKKTAERLVVEL 128 >gi|83594686|ref|YP_428438.1| transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase [Rhodospirillum rubrum ATCC 11170] gi|83577600|gb|ABC24151.1| Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase [Rhodospirillum rubrum ATCC 11170] Length = 486 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATL 33 G ++++ + L R+PG GP +A+ L Sbjct: 405 PGPDLDSAVARLCRLPGIGPWTAQYIAL 432 >gi|162453391|ref|YP_001615758.1| DNA topoisomerase I [Sorangium cellulosum 'So ce 56'] gi|161163973|emb|CAN95278.1| DNA topoisomerase I [Sorangium cellulosum 'So ce 56'] Length = 864 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 20/36 (55%) Query: 137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITR 172 KK E++ A EG+ A +I +++K +K+ R Sbjct: 72 KKADEVLLATDPDREGEAIAFHISEEIKNPKLKVAR 107 >gi|22298075|ref|NP_681322.1| Holliday junction DNA helicase motor protein [Thermosynechococcus elongatus BP-1] gi|34222868|sp|Q8DLG1|RUVA_THEEB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|22294253|dbj|BAC08084.1| Holliday junction DNA helicase [Thermosynechococcus elongatus BP-1] Length = 210 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 8/35 (22%) Query: 9 EIENLIKI--------LARIPGFGPRSARRATLHL 35 + L++ L+R PG G ++A R L L Sbjct: 99 PLPELVQAIVSGNTRRLSRAPGVGHKTAERIALEL 133 >gi|300868186|ref|ZP_07112818.1| Holliday junction ATP-dependent DNA helicase ruvA [Oscillatoria sp. PCC 6506] gi|300333810|emb|CBN58002.1| Holliday junction ATP-dependent DNA helicase ruvA [Oscillatoria sp. PCC 6506] Length = 207 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 8/34 (23%) Query: 10 IENLIKI--------LARIPGFGPRSARRATLHL 35 +++L++ LA+ PG G ++A R L L Sbjct: 99 LQDLVQAIVGGNTRILAKTPGVGNKTAERLVLEL 132 >gi|237746839|ref|ZP_04577319.1| holliday junction DNA helicase subunit RuvA [Oxalobacter formigenes HOxBLS] gi|229378190|gb|EEO28281.1| holliday junction DNA helicase subunit RuvA [Oxalobacter formigenes HOxBLS] Length = 193 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L RIPG G ++A R L L Sbjct: 110 LTRIPGIGKKTAERLLLEL 128 >gi|206900418|ref|YP_002251500.1| radical SAM [Dictyoglomus thermophilum H-6-12] gi|206739521|gb|ACI18579.1| radical SAM [Dictyoglomus thermophilum H-6-12] Length = 377 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 4 KITGKEIENLI-KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCS 61 + EI + L RIPG GP SA++ +K +++ + + + +V C Sbjct: 304 QFFPIEINKATYEQLLRIPGIGPISAKKI----IKARKEQKIRDIKDLKKLGIQVERCK 358 >gi|88800180|ref|ZP_01115748.1| Holliday junction DNA helicase motor protein [Reinekea sp. MED297] gi|88777026|gb|EAR08233.1| Holliday junction DNA helicase motor protein [Reinekea sp. MED297] Length = 201 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLG 44 L +IPG G ++A R +V+ K++L Sbjct: 109 ALVKIPGVGKKTAERL---IVEMKDKLAQ 134 >gi|85857993|ref|YP_460195.1| protein involved in formate dehydrogenase formation [Syntrophus aciditrophicus SB] gi|85721084|gb|ABC76027.1| protein involved in formate dehydrogenase formation [Syntrophus aciditrophicus SB] Length = 293 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 23/92 (25%) Query: 27 SARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDT-----------TDPCAIC 75 A R L E+ G +AE + ++ + C ICG+ + C+ C Sbjct: 151 QASRIVL------EKRAGDIAEQIEALHWEKGYCPICGSFPSLAVIGEKIGERRLHCSRC 204 Query: 76 IDQQRDASVIIVVEDVADLWALERSKAVNALY 107 R + VI + E + +N Y Sbjct: 205 GHNWRFSRVICPYCER------EAQQEMNFFY 230 >gi|24113211|ref|NP_707721.1| Holliday junction DNA helicase RuvA [Shigella flexneri 2a str. 301] gi|110805805|ref|YP_689325.1| Holliday junction DNA helicase RuvA [Shigella flexneri 5 str. 8401] gi|44888467|sp|Q83KR4|RUVA_SHIFL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|123342783|sp|Q0T3U5|RUVA_SHIF8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|24052207|gb|AAN43428.1| Holliday junction helicase subunit B [Shigella flexneri 2a str. 301] gi|110615353|gb|ABF04020.1| Holliday junction helicase [Shigella flexneri 5 str. 8401] Length = 203 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 8/41 (19%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHLVKKKE 40 ++ ++ N ++ L ++PG G ++A R +V+ K+ Sbjct: 93 MSAQQFVNAVEREEVGPLVKLPGIGKKTAERL---IVEMKD 130 >gi|315656670|ref|ZP_07909557.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492625|gb|EFU82229.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 194 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L IPG G +SA R L + Sbjct: 106 VAALQGIPGVGKKSAERMILEI 127 >gi|315655417|ref|ZP_07908317.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus curtisii ATCC 51333] gi|315490357|gb|EFU79982.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus curtisii ATCC 51333] Length = 194 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L IPG G +SA R L + Sbjct: 106 VAALQGIPGVGKKSAERMILEI 127 >gi|254582863|ref|XP_002499163.1| ZYRO0E05346p [Zygosaccharomyces rouxii] gi|238942737|emb|CAR30908.1| ZYRO0E05346p [Zygosaccharomyces rouxii] Length = 564 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 1 MQKKI-TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN----IYN 55 M + G +L+ IL+RIP R L ++K + L L E + N + Sbjct: 451 MASGMVKGTLFSDLMNILSRIP--------RIVLLILKTND-LTRNLDECLQNPLGPERS 501 Query: 56 KVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALER 99 + + C + C +Q + S+ + +++ E Sbjct: 502 FLIMTQYCARTVYNEACEAINNQYKRWSLCWMWQELKAWLEYES 545 >gi|298346872|ref|YP_003719559.1| Holliday junction DNA helicase motor protein [Mobiluncus curtisii ATCC 43063] gi|304389423|ref|ZP_07371386.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236933|gb|ADI68065.1| Holliday junction DNA helicase motor protein [Mobiluncus curtisii ATCC 43063] gi|304327233|gb|EFL94468.1| crossover junction ATP-dependent DNA helicase RuvA [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 194 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + L IPG G +SA R L + Sbjct: 106 VAALQGIPGVGKKSAERMILEI 127 >gi|126668399|ref|ZP_01739356.1| Holliday junction DNA helicase motor protein [Marinobacter sp. ELB17] gi|126627108|gb|EAZ97748.1| Holliday junction DNA helicase motor protein [Marinobacter sp. ELB17] Length = 209 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 16/29 (55%), Gaps = 3/29 (10%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLG 44 L ++PG G ++A R L++ +++ Sbjct: 109 ALVKLPGVGKKTAERL---LIEMTDRIGQ 134 >gi|167005424|ref|ZP_02271182.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 81-176] Length = 135 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|86608038|ref|YP_476800.1| Holliday junction DNA helicase RuvA [Synechococcus sp. JA-2-3B'a(2-13)] gi|123738043|sp|Q2JNW8|RUVA_SYNJB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|86556580|gb|ABD01537.1| Holliday junction DNA helicase RuvA [Synechococcus sp. JA-2-3B'a(2-13)] Length = 204 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +++L+ PG G ++A+R L L Sbjct: 110 VRLLSLTPGVGHKTAQRLALEL 131 >gi|222823639|ref|YP_002575213.1| Holliday junction DNA helicase, DNA-binding subunit [Campylobacter lari RM2100] gi|254766949|sp|B9KFX7|RUVA_CAMLR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|222538861|gb|ACM63962.1| Holliday junction DNA helicase, DNA-binding subunit [Campylobacter lari RM2100] Length = 183 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 17 LARIPGFGPRSARRA 31 ++PG GP+SA+R Sbjct: 110 FKKVPGIGPKSAKRI 124 >gi|86150190|ref|ZP_01068417.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597606|ref|ZP_01100840.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 84-25] gi|218562427|ref|YP_002344206.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|20455273|sp|Q9PPC1|RUVA_CAMJE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|85839306|gb|EAQ56568.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190198|gb|EAQ94173.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 84-25] gi|112360133|emb|CAL34927.1| putative Holliday junction ATP-dependent DNA helicase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926045|gb|ADC28397.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni IA3902] gi|315928270|gb|EFV07586.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929355|gb|EFV08561.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 305] Length = 183 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|306836241|ref|ZP_07469223.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium accolens ATCC 49726] gi|304567833|gb|EFM43416.1| crossover junction ATP-dependent DNA helicase RuvA [Corynebacterium accolens ATCC 49726] Length = 202 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 +K L IPG G R A+R TL L + + A Sbjct: 106 VKALQSIPGVGKRMAQRLTLEL----KDKVKRFA 135 >gi|227503511|ref|ZP_03933560.1| Holliday junction DNA helicase motor protein [Corynebacterium accolens ATCC 49725] gi|227076014|gb|EEI13977.1| Holliday junction DNA helicase motor protein [Corynebacterium accolens ATCC 49725] Length = 202 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 +K L IPG G R A+R TL L + + A Sbjct: 106 VKALQSIPGVGKRMAQRLTLEL----KDKVKRFA 135 >gi|304312895|ref|YP_003812493.1| Holliday junction resolvasome DNA-binding subunit [gamma proteobacterium HdN1] gi|301798628|emb|CBL46860.1| Holliday junction resolvasome DNA-binding subunit [gamma proteobacterium HdN1] Length = 208 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 + L RIPG G ++A R +V+ +++L L ++ + Sbjct: 107 VSALIRIPGVGKKTAERL---IVEMQDRLPRTLETSLTAL 143 >gi|254787341|ref|YP_003074770.1| Holliday junction DNA helicase RuvA [Teredinibacter turnerae T7901] gi|259495657|sp|C5BQT5|RUVA_TERTT RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|237687527|gb|ACR14791.1| Holliday junction DNA helicase RuvA [Teredinibacter turnerae T7901] Length = 206 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 21/33 (63%), Gaps = 3/33 (9%) Query: 10 IENLIKILARIPGFGPRSARRATLHLVKKKEQL 42 +E+ + L ++PG G ++A R +++ +++L Sbjct: 102 LEDNLNALVKVPGVGKKTAERL---IIEMRDKL 131 >gi|256375340|ref|YP_003099000.1| competence protein ComEA helix-hairpin-helix repeat protein [Actinosynnema mirum DSM 43827] gi|255919643|gb|ACU35154.1| competence protein ComEA helix-hairpin-helix repeat protein [Actinosynnema mirum DSM 43827] Length = 242 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 13/21 (61%) Query: 14 IKILARIPGFGPRSARRATLH 34 ++ L +PG GP +A+R H Sbjct: 189 VEQLDALPGVGPVTAQRIVDH 209 >gi|262282056|ref|ZP_06059825.1| ATP-dependent DNA helicase RecG [Streptococcus sp. 2_1_36FAA] gi|262262510|gb|EEY81207.1| ATP-dependent DNA helicase RecG [Streptococcus sp. 2_1_36FAA] Length = 671 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 14/21 (66%) Query: 12 NLIKILARIPGFGPRSARRAT 32 NL + L+ +PG GP+SA + Sbjct: 2 NLHQPLSVLPGVGPKSAEKFA 22 >gi|157150698|ref|YP_001449735.1| ATP-dependent DNA helicase RecG [Streptococcus gordonii str. Challis substr. CH1] gi|157075492|gb|ABV10175.1| ATP-dependent DNA helicase RecG [Streptococcus gordonii str. Challis substr. CH1] Length = 671 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 14/21 (66%) Query: 12 NLIKILARIPGFGPRSARRAT 32 NL + L+ +PG GP+SA + Sbjct: 2 NLHQPLSVLPGVGPKSAEKFA 22 >gi|57237644|ref|YP_178892.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni RM1221] gi|86153371|ref|ZP_01071575.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613230|ref|YP_001000488.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 81-176] gi|157415070|ref|YP_001482326.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 81116] gi|205356769|ref|ZP_03223528.1| putative Holliday junction DNA helicase [Campylobacter jejuni subsp. jejuni CG8421] gi|73621848|sp|Q5HUZ3|RUVA_CAMJR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230537|sp|A1VZE7|RUVA_CAMJJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|172047113|sp|A8FLL2|RUVA_CAMJ8 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|57166448|gb|AAW35227.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni RM1221] gi|85843097|gb|EAQ60308.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249483|gb|EAQ72443.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 81-176] gi|157386034|gb|ABV52349.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 81116] gi|205345336|gb|EDZ31980.1| putative Holliday junction DNA helicase [Campylobacter jejuni subsp. jejuni CG8421] gi|307747711|gb|ADN90981.1| Holliday junction ATP-dependent DNA helicase ruvA [Campylobacter jejuni subsp. jejuni M1] gi|315058253|gb|ADT72582.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni S3] gi|315931217|gb|EFV10189.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 327] Length = 183 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|283957218|ref|ZP_06374680.1| putative Holliday junction ATP-dependent DNA helicase [Campylobacter jejuni subsp. jejuni 1336] gi|283791290|gb|EFC30097.1| putative Holliday junction ATP-dependent DNA helicase [Campylobacter jejuni subsp. jejuni 1336] Length = 183 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|260587811|ref|ZP_05853724.1| holliday junction DNA helicase RuvA [Blautia hansenii DSM 20583] gi|331083813|ref|ZP_08332922.1| Holliday junction DNA helicase RuvA [Lachnospiraceae bacterium 6_1_63FAA] gi|260542076|gb|EEX22645.1| holliday junction DNA helicase RuvA [Blautia hansenii DSM 20583] gi|330403238|gb|EGG82798.1| Holliday junction DNA helicase RuvA [Lachnospiraceae bacterium 6_1_63FAA] Length = 203 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K +++ PG G ++A++ L L Sbjct: 107 VKTISKAPGIGKKTAQKLILEL 128 >gi|148926965|ref|ZP_01810642.1| putative Holliday junction DNA helicase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845049|gb|EDK22146.1| putative Holliday junction DNA helicase [Campylobacter jejuni subsp. jejuni CG8486] Length = 183 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|283853683|ref|ZP_06370914.1| Holliday junction DNA helicase RuvA [Desulfovibrio sp. FW1012B] gi|283570924|gb|EFC18953.1| Holliday junction DNA helicase RuvA [Desulfovibrio sp. FW1012B] Length = 201 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 11/17 (64%) Query: 15 KILARIPGFGPRSARRA 31 L R+PG G +SA+R Sbjct: 109 DALVRVPGIGKKSAQRI 125 >gi|110801789|ref|YP_699225.1| Holliday junction DNA helicase RuvA [Clostridium perfringens SM101] gi|122956588|sp|Q0SRN2|RUVA_CLOPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|110682290|gb|ABG85660.1| Holliday junction DNA helicase RuvA [Clostridium perfringens SM101] Length = 201 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 15 KILARIPGFGPRSARRATLHL---VKKKE--QLLGPLAEAMAN 52 K + R PG G ++A+R L L +K E L E + + Sbjct: 108 KHITRAPGIGKKTAQRIILELKDKLKPDELTSEEEQLIEGIND 150 >gi|261418393|ref|YP_003252075.1| Holliday junction DNA helicase RuvA [Geobacillus sp. Y412MC61] gi|319767648|ref|YP_004133149.1| Holliday junction DNA helicase RuvA [Geobacillus sp. Y412MC52] gi|261374850|gb|ACX77593.1| Holliday junction DNA helicase RuvA [Geobacillus sp. Y412MC61] gi|317112514|gb|ADU95006.1| Holliday junction DNA helicase RuvA [Geobacillus sp. Y412MC52] Length = 194 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL 35 E+ I+ L + PG G ++AR+ L L Sbjct: 94 PDELARAIEEENEAFLCKFPGVGKKTARQMILDL 127 >gi|56421127|ref|YP_148445.1| Holliday junction DNA helicase RuvA [Geobacillus kaustophilus HTA426] gi|297529245|ref|YP_003670520.1| Holliday junction DNA helicase RuvA [Geobacillus sp. C56-T3] gi|81346764|sp|Q5KWQ9|RUVA_GEOKA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|56380969|dbj|BAD76877.1| holliday junction DNA helicase [Geobacillus kaustophilus HTA426] gi|297252497|gb|ADI25943.1| Holliday junction DNA helicase RuvA [Geobacillus sp. C56-T3] Length = 194 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL 35 E+ I+ L + PG G ++AR+ L L Sbjct: 94 PDELARAIEEENEAFLCKFPGVGKKTARQMILDL 127 >gi|86152153|ref|ZP_01070365.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 260.94] gi|315124320|ref|YP_004066324.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840938|gb|EAQ58188.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 260.94] gi|315018042|gb|ADT66135.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 183 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|323486643|ref|ZP_08091964.1| Holliday junction DNA helicase RuvA [Clostridium symbiosum WAL-14163] gi|323400024|gb|EGA92401.1| Holliday junction DNA helicase RuvA [Clostridium symbiosum WAL-14163] Length = 203 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 K +++ PG G ++A+R L L K + + ++A+ Sbjct: 108 KAISKAPGVGAKTAQRIILDL--KDKVSAEEMLASVAD 143 >gi|33594301|ref|NP_881945.1| Holliday junction DNA helicase motor protein [Bordetella pertussis Tohama I] gi|33602977|ref|NP_890537.1| Holliday junction DNA helicase motor protein [Bordetella bronchiseptica RB50] gi|44888431|sp|Q7VTT9|RUVA_BORPE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|44888438|sp|Q7WGB6|RUVA_BORBR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|33564376|emb|CAE43681.1| holliday junction DNA helicase [Bordetella pertussis Tohama I] gi|33568608|emb|CAE34366.1| holliday junction DNA helicase [Bordetella bronchiseptica RB50] gi|332383712|gb|AEE68559.1| Holliday junction DNA helicase RuvA [Bordetella pertussis CS] Length = 190 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L R+PG G ++A R L++ + +L + Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADI 136 >gi|33598084|ref|NP_885727.1| Holliday junction DNA helicase motor protein [Bordetella parapertussis 12822] gi|44888435|sp|Q7W4T9|RUVA_BORPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|33566642|emb|CAE38852.1| holliday junction DNA helicase [Bordetella parapertussis] Length = 190 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L R+PG G ++A R L++ + +L + Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADI 136 >gi|311104199|ref|YP_003977052.1| holliday junction DNA helicase RuvA [Achromobacter xylosoxidans A8] gi|310758888|gb|ADP14337.1| holliday junction DNA helicase RuvA [Achromobacter xylosoxidans A8] Length = 190 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L R+PG G ++A R L++ + +L + Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADI 136 >gi|160902900|ref|YP_001568481.1| helix-hairpin-helix DNA-binding motif-containing protein [Petrotoga mobilis SJ95] gi|254767380|sp|A9BIJ5|RUVA_PETMO RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|160360544|gb|ABX32158.1| helix-hairpin-helix motif [Petrotoga mobilis SJ95] Length = 190 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 16 ILARIPGFGPRSARRA 31 +L+ +PG G ++A R Sbjct: 108 LLSSLPGIGKKTAERL 123 >gi|159044059|ref|YP_001532853.1| ATP-dependent DNA helicase RecG [Dinoroseobacter shibae DFL 12] gi|157911819|gb|ABV93252.1| ATP-dependent DNA helicase [Dinoroseobacter shibae DFL 12] Length = 696 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHL-VKKKEQLLGPL 46 M + + L L +PG G ++A+ H+ + + L+ L Sbjct: 1 MSSR--PAALFPLFAELETLPGIGKKTAQTLA-HMDIARPRDLIFTL 44 >gi|39998418|ref|NP_954369.1| radical SAM domain-containing protein [Geobacter sulfurreducens PCA] gi|39985365|gb|AAR36719.1| radical SAM domain protein [Geobacter sulfurreducens PCA] gi|298507363|gb|ADI86086.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter sulfurreducens KN400] Length = 431 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 8/51 (15%) Query: 15 KILARIPGFGPRSARRATL-----HLVKKKEQLLGPLAEAMANIYNKVCLC 60 + L R+PG G RSA+R L HL L L M + Sbjct: 334 EALLRVPGIGVRSAQRIVLARRGSHL---SLDDLPRLGVVMKRARYFITAR 381 >gi|157149552|ref|YP_001451544.1| IS1294, transposase, truncation [Escherichia coli E24377A] gi|157076719|gb|ABV16428.1| IS1294, transposase, truncation [Escherichia coli E24377A] Length = 193 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 3 MPKSLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 60 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 61 AHYNG---GASLSFRYLDHKT 78 >gi|266625272|ref|ZP_06118207.1| holliday junction DNA helicase RuvA [Clostridium hathewayi DSM 13479] gi|288862827|gb|EFC95125.1| holliday junction DNA helicase RuvA [Clostridium hathewayi DSM 13479] Length = 202 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 +T E+ I K ++R PG G ++A+R L L Sbjct: 91 SAMTPDELRLAIITGDAKAISRAPGIGVKTAQRVILDL 128 >gi|332022869|gb|EGI63141.1| Sequestosome-1 [Acromyrmex echinatior] Length = 419 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 14/144 (9%), Positives = 37/144 (25%), Gaps = 13/144 (9%) Query: 33 LHLVKKKEQLLGPLAEAMANIYNKVCLCSIC--GNVDTTDPCAICIDQQRDASVIIVVED 90 L+++ + EQ +++ + I + +C +C C C D + + Sbjct: 90 LYIMSQSEQETIDMSK-IEKIQHPGVICDVCDKAICGFRFKCMQCADYDLCIDCMTLGNH 148 Query: 91 VADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATI 150 V + YH + + + + + Sbjct: 149 TEHYMVRMTQPIVWSSYHARRLAHHVRKFVKKAAHHCKEDERKCNESHKNKNKRGSCPVF 208 Query: 151 EGQTTAHYIMDKLKGIDVKITRLA 174 + + +T +A Sbjct: 209 NAD----------DPLGINVTVMA 222 >gi|260887321|ref|ZP_05898584.1| holliday junction DNA helicase RuvA [Selenomonas sputigena ATCC 35185] gi|330838926|ref|YP_004413506.1| Holliday junction DNA helicase RuvA [Selenomonas sputigena ATCC 35185] gi|260862957|gb|EEX77457.1| holliday junction DNA helicase RuvA [Selenomonas sputigena ATCC 35185] gi|329746690|gb|AEC00047.1| Holliday junction DNA helicase RuvA [Selenomonas sputigena ATCC 35185] Length = 201 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 15 KILARIPGFGPRSARRATLHL 35 IL + PG G +SA R L L Sbjct: 107 DILTKAPGIGKKSAERIILEL 127 >gi|195171953|ref|XP_002026766.1| GL26998 [Drosophila persimilis] gi|194111705|gb|EDW33748.1| GL26998 [Drosophila persimilis] Length = 728 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Query: 1 MQKK--ITGKEIENL-IKILARIPGFGPRSARRATL 33 M K + + ++ L ++PG GP++A + Sbjct: 657 MSKHRVMFLNLLNTAEVRELQKLPGIGPKTAFALVM 692 >gi|323692211|ref|ZP_08106454.1| Holliday junction DNA helicase RuvA [Clostridium symbiosum WAL-14673] gi|323503785|gb|EGB19604.1| Holliday junction DNA helicase RuvA [Clostridium symbiosum WAL-14673] Length = 203 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 14/21 (66%) Query: 15 KILARIPGFGPRSARRATLHL 35 K +++ PG G ++A+R L L Sbjct: 108 KAISKAPGVGAKTAQRIILDL 128 >gi|317488242|ref|ZP_07946810.1| endonuclease III [Eggerthella sp. 1_3_56FAA] gi|325830754|ref|ZP_08164138.1| endonuclease III [Eggerthella sp. HGA1] gi|316912654|gb|EFV34195.1| endonuclease III [Eggerthella sp. 1_3_56FAA] gi|325487161|gb|EGC89604.1| endonuclease III [Eggerthella sp. HGA1] Length = 220 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M G EI I L ++PG G ++A Sbjct: 103 MVVADYGGEIPRDIDELQKLPGVGRKTA 130 >gi|301155728|emb|CBW15196.1| component of RuvABC resolvasome, regulatory subunit [Haemophilus parainfluenzae T3T1] Length = 203 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 5/34 (14%) Query: 1 MQKKITGKEIENLIKILARI---PGFGPRSARRA 31 M IE + L+++ PG G ++A R Sbjct: 93 MSVDQFAYAIER--EELSKLVKIPGVGKKTAERL 124 >gi|257791041|ref|YP_003181647.1| endonuclease III [Eggerthella lenta DSM 2243] gi|257474938|gb|ACV55258.1| endonuclease III [Eggerthella lenta DSM 2243] Length = 220 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M G EI I L ++PG G ++A Sbjct: 103 MVVADYGGEIPRDIDELQKLPGVGRKTA 130 >gi|124088291|ref|XP_001347040.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145474489|ref|XP_001423267.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057429|emb|CAH03413.1| hypothetical protein, transmembrane helices [Paramecium tetraurelia] gi|124390327|emb|CAK55869.1| unnamed protein product [Paramecium tetraurelia] Length = 2954 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 38/116 (32%), Gaps = 1/116 (0%) Query: 35 LVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVA-D 93 +++ +++ + ++N Y C CG + C+ + I + + Sbjct: 603 MLENNKEICMFETDCLSNQYWSEQQCYDCGQYCAKCIQSKCLYCINNQGYFISFDKLNCA 662 Query: 94 LWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISAT 149 + ++ + Y + LD + Q LI+ + + + F Sbjct: 663 ICNIKDCQYCFQYYQSDDKYYTTLDYEPFMENIQQELIKIGCAQCNQNMYFNFQTN 718 >gi|291531143|emb|CBK96728.1| endonuclease III [Eubacterium siraeum 70/3] Length = 212 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 17/28 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M + G EI + I+ L ++PG G ++A Sbjct: 96 MLRDDFGGEIPDTIEELVKLPGVGRKTA 123 >gi|57167798|ref|ZP_00366938.1| Holliday junction DNA helicase RuvA [Campylobacter coli RM2228] gi|305432180|ref|ZP_07401344.1| crossover junction ATP-dependent DNA helicase RuvA [Campylobacter coli JV20] gi|57020920|gb|EAL57584.1| Holliday junction DNA helicase RuvA [Campylobacter coli RM2228] gi|304444723|gb|EFM37372.1| crossover junction ATP-dependent DNA helicase RuvA [Campylobacter coli JV20] Length = 183 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|305681259|ref|ZP_07404066.1| Holliday junction DNA helicase RuvA [Corynebacterium matruchotii ATCC 14266] gi|305659464|gb|EFM48964.1| Holliday junction DNA helicase RuvA [Corynebacterium matruchotii ATCC 14266] Length = 198 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 T E+ + I K L +IPG G R A R + L Sbjct: 92 YTTPELAHAITHGDTKTLQKIPGVGKRMAERMVVDL 127 >gi|225021302|ref|ZP_03710494.1| hypothetical protein CORMATOL_01321 [Corynebacterium matruchotii ATCC 33806] gi|224946035|gb|EEG27244.1| hypothetical protein CORMATOL_01321 [Corynebacterium matruchotii ATCC 33806] Length = 198 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 T E+ + I K L +IPG G R A R + L Sbjct: 92 YTTPELAHAITHGDTKTLQKIPGVGKRMAERMVVDL 127 >gi|254458817|ref|ZP_05072241.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] gi|207084583|gb|EDZ61871.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] Length = 1407 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 26/135 (19%) Query: 61 SICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRI 120 S +T C I + + + + N +H +L I Sbjct: 994 STTTLANTLTGCEISSNHTNPTTNV-------------KYNDYNVTFHPYEFTLLTTTTI 1040 Query: 121 GPEDIGIQSLIERIEVKKIRE-----LIFAISATIEGQTTAHYIMDKL-----KGIDVKI 170 G +I L + + I + + S T G+TTA + + + K +D+ I Sbjct: 1041 GMGNITPPLLKPFVYMADISQDENVSVHLNTSITARGKTTATGLSNFVTGCYAKPLDINI 1100 Query: 171 TRLAYGIPMGSELDY 185 T+ A + ++L+Y Sbjct: 1101 TKSA---MINTQLEY 1112 >gi|198282210|ref|YP_002218531.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665092|ref|YP_002424575.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans ATCC 23270] gi|226698723|sp|B5EJL8|RUVA_ACIF5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|226725431|sp|B7J3G2|RUVA_ACIF2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|198246731|gb|ACH82324.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517305|gb|ACK77891.1| Holliday junction DNA helicase RuvA [Acidithiobacillus ferrooxidans ATCC 23270] Length = 193 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 16 ILARIPGFGPRSARRATLHL 35 L IPG GP++A R + L Sbjct: 109 QLTAIPGIGPKTAERLVVEL 128 >gi|198467365|ref|XP_001354375.2| GA14585 [Drosophila pseudoobscura pseudoobscura] gi|198149210|gb|EAL31428.2| GA14585 [Drosophila pseudoobscura pseudoobscura] Length = 748 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Query: 1 MQKK--ITGKEIENL-IKILARIPGFGPRSARRATL 33 M K + + ++ L ++PG GP++A + Sbjct: 677 MSKHRVMFLNLLNTAEVRELQKLPGIGPKTAFALVM 712 >gi|154174555|ref|YP_001408214.1| Holliday junction DNA helicase RuvA [Campylobacter curvus 525.92] gi|166230533|sp|A7GYC2|RUVA_CAMC5 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|112802462|gb|EAT99806.1| holliday junction DNA helicase RuvA [Campylobacter curvus 525.92] Length = 184 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 5/34 (14%) Query: 3 KKITGKEIENLI-----KILARIPGFGPRSARRA 31 ++ N + +PG GP++ARR Sbjct: 91 SSLSPNAFSNAVINGDADTFKSVPGIGPKTARRI 124 >gi|325969055|ref|YP_004245247.1| aminotransferase class I and II [Vulcanisaeta moutnovskia 768-28] gi|323708258|gb|ADY01745.1| aminotransferase class I and II [Vulcanisaeta moutnovskia 768-28] Length = 398 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 27/103 (26%), Gaps = 3/103 (2%) Query: 29 RRATLHL---VKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVI 85 +R L + K + L L + V + GN+ D D RD Sbjct: 144 KRLALSMDEGFKIDVERLKELITSRTKALVLVSPDNPTGNIVDRDTAKAIADLARDKDFW 203 Query: 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQ 128 IV ++ E Y P G + Sbjct: 204 IVSDEAYRTLIYEGEHTYIYRYAPDHVISINTFSKDPGIPGWR 246 >gi|331659152|ref|ZP_08360094.1| hypothetical protein ECKG_02661 [Escherichia coli TA206] gi|331053734|gb|EGI25763.1| hypothetical protein ECKG_02661 [Escherichia coli TA206] Length = 122 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 ++ + + L+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 1 MTESLSHITTESQWRGLVLKAGRKYWH--VYMSKKTTGGKNTARYLGRYLKKPPIAASRL 58 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 59 AHYNG---GASLSFRYLDHNT 76 >gi|271967390|ref|YP_003341586.1| Holliday junction DNA helicase subunit RuvA [Streptosporangium roseum DSM 43021] gi|270510565|gb|ACZ88843.1| Holliday junction DNA helicase subunit RuvA [Streptosporangium roseum DSM 43021] Length = 206 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L R+PG GP+ A+R + L Sbjct: 106 VKALTRVPGVGPKGAQRIIVDL 127 >gi|163815611|ref|ZP_02206984.1| hypothetical protein COPEUT_01786 [Coprococcus eutactus ATCC 27759] gi|158449248|gb|EDP26243.1| hypothetical protein COPEUT_01786 [Coprococcus eutactus ATCC 27759] Length = 516 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 15 KILARIPGFGPRSARRAT 32 +L RIPG GP+SA R Sbjct: 417 DLLLRIPGIGPKSAARIV 434 >gi|283954372|ref|ZP_06371893.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 414] gi|283794171|gb|EFC32919.1| holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. jejuni 414] Length = 183 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|297205833|ref|ZP_06923228.1| exodeoxyribonuclease V alpha subunit [Lactobacillus jensenii JV-V16] gi|297148959|gb|EFH29257.1| exodeoxyribonuclease V alpha subunit [Lactobacillus jensenii JV-V16] Length = 784 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 9/44 (20%) Query: 13 LIKILA--RIPGFGPRSARRA-------TLHLVKKKEQLLGPLA 47 L K L+ + PG G ++A+ L ++K+ L L+ Sbjct: 86 LTKYLSGDKFPGIGRKTAQSIIDQLGLNALQVLKENPNKLDQLS 129 >gi|153952036|ref|YP_001398280.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. doylei 269.97] gi|166230536|sp|A7H450|RUVA_CAMJD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|152939482|gb|ABS44223.1| Holliday junction DNA helicase RuvA [Campylobacter jejuni subsp. doylei 269.97] Length = 183 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 17 LARIPGFGPRSARRATLHL 35 L ++PG GP+SA+R + L Sbjct: 110 LKKVPGIGPKSAKRIIVEL 128 >gi|319795920|ref|YP_004157560.1| holliday junction DNA helicase ruva [Variovorax paradoxus EPS] gi|315598383|gb|ADU39449.1| Holliday junction DNA helicase RuvA [Variovorax paradoxus EPS] Length = 190 Score = 36.0 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARR 30 + IT +E+ L+ +IPG G ++A R Sbjct: 99 SQAITTQELGRLV----KIPGIGKKTAER 123 >gi|257465001|ref|ZP_05629372.1| Holliday junction DNA helicase RuvA [Actinobacillus minor 202] gi|257450661|gb|EEV24704.1| Holliday junction DNA helicase RuvA [Actinobacillus minor 202] Length = 200 Score = 36.0 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 4/30 (13%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARRA 31 + +E+ L +IPG G ++A R Sbjct: 99 ASAVENEELAKLT----KIPGIGRKTAERL 124 >gi|239817626|ref|YP_002946536.1| Holliday junction DNA helicase RuvA [Variovorax paradoxus S110] gi|259495659|sp|C5CM11|RUVA_VARPS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|239804203|gb|ACS21270.1| Holliday junction DNA helicase RuvA [Variovorax paradoxus S110] Length = 190 Score = 36.0 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%) Query: 2 QKKITGKEIENLIKILARIPGFGPRSARR 30 + IT +E+ L+ +IPG G ++A R Sbjct: 99 SQAITTQELGRLV----KIPGIGKKTAER 123 >gi|3413204|emb|CAA07835.1| transposase [Escherichia coli] Length = 351 Score = 36.0 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKSGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|90411664|ref|ZP_01219674.1| Holliday junction DNA helicase motor protein [Photobacterium profundum 3TCK] gi|90327554|gb|EAS43907.1| Holliday junction DNA helicase motor protein [Photobacterium profundum 3TCK] Length = 206 Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L +IPG G ++A R Sbjct: 107 ITTLVKIPGVGKKTAERLV 125 >gi|161936318|ref|YP_129329.2| Holliday junction DNA helicase RuvA [Photobacterium profundum SS9] gi|90135510|sp|Q6LT49|RUVA_PHOPR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA Length = 206 Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L +IPG G ++A R Sbjct: 107 ITTLVKIPGVGKKTAERLV 125 >gi|46912737|emb|CAG19527.1| Putative holliday junction DNA helicase RuvA [Photobacterium profundum SS9] Length = 228 Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 11/19 (57%) Query: 14 IKILARIPGFGPRSARRAT 32 I L +IPG G ++A R Sbjct: 129 ITTLVKIPGVGKKTAERLV 147 >gi|256850951|ref|ZP_05556340.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus jensenii 27-2-CHN] gi|260661165|ref|ZP_05862079.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus jensenii 115-3-CHN] gi|282934134|ref|ZP_06339412.1| helicase, RecD/TraA family [Lactobacillus jensenii 208-1] gi|256616013|gb|EEU21201.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus jensenii 27-2-CHN] gi|260548102|gb|EEX24078.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus jensenii 115-3-CHN] gi|281301748|gb|EFA94014.1| helicase, RecD/TraA family [Lactobacillus jensenii 208-1] Length = 784 Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 9/44 (20%) Query: 13 LIKILA--RIPGFGPRSARRA-------TLHLVKKKEQLLGPLA 47 L K L+ + PG G ++A+ L ++K+ L L+ Sbjct: 86 LTKYLSGDKFPGIGRKTAQSIIDQLGLNALQVLKENPNKLDQLS 129 >gi|15838502|ref|NP_299190.1| Holliday junction DNA helicase RuvA [Xylella fastidiosa 9a5c] gi|20455272|sp|Q9PC77|RUVA_XYLFA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|9106999|gb|AAF84710.1|AE004010_7 holliday junction binding protein, DNA helicase [Xylella fastidiosa 9a5c] Length = 194 Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 14 IKILARIPGFGPRSARRA 31 + L IPG G ++A R Sbjct: 107 VNALTVIPGIGKKTAERM 124 >gi|71275803|ref|ZP_00652087.1| DNA recombination protein, RuvA [Xylella fastidiosa Dixon] gi|71900402|ref|ZP_00682535.1| DNA recombination protein, RuvA [Xylella fastidiosa Ann-1] gi|170730217|ref|YP_001775650.1| Holliday junction DNA helicase RuvA [Xylella fastidiosa M12] gi|229560142|sp|B0U2E1|RUVA_XYLFM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|71163381|gb|EAO13099.1| DNA recombination protein, RuvA [Xylella fastidiosa Dixon] gi|71729834|gb|EAO31932.1| DNA recombination protein, RuvA [Xylella fastidiosa Ann-1] gi|167965010|gb|ACA12020.1| holliday junction binding protein, DNA helicase [Xylella fastidiosa M12] Length = 194 Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 14 IKILARIPGFGPRSARRA 31 + L IPG G ++A R Sbjct: 107 VNALTVIPGIGKKTAERM 124 >gi|313847675|emb|CBY16663.1| putative holliday junction DNA helicase RuvA [Chlamydophila psittaci RD1] Length = 222 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54 IK +A +PG G ++A + + L K+K L PL + + Sbjct: 123 IKAIASVPGIGKKTAEKLMVDL-KQKLADLLPLDSQITASW 162 >gi|291533989|emb|CBL07102.1| Holliday junction DNA helicase subunit RuvA [Megamonas hypermegale ART12/1] Length = 161 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + +L PG G ++A R L L Sbjct: 106 VSLLTNAPGIGKKTAERIVLEL 127 >gi|269795058|ref|YP_003314513.1| Holliday junction DNA helicase subunit RuvA [Sanguibacter keddieii DSM 10542] gi|269097243|gb|ACZ21679.1| Holliday junction DNA helicase subunit RuvA [Sanguibacter keddieii DSM 10542] Length = 206 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 +K L R+PG G + A+R L L Sbjct: 106 VKALTRVPGIGAKGAQRLILEL 127 >gi|168045681|ref|XP_001775305.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673386|gb|EDQ59910.1| predicted protein [Physcomitrella patens subsp. patens] Length = 303 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 9 EIENLIKILARIPGFGPRSARRATLHLVKK 38 +E+ + L +PG GP+ A L + + Sbjct: 208 SLEDAVTSLCTLPGIGPKVAACIALFSLDQ 237 >gi|58383275|ref|YP_194845.1| IS1294 transposase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|237809917|ref|YP_002894356.1| IS1294 transposase [Escherichia coli] gi|260751933|ref|YP_003232471.1| putative IS1294 transposase [Escherichia coli O26:H11 str. 11368] gi|300925759|ref|ZP_07141617.1| transposase [Escherichia coli MS 182-1] gi|305696836|ref|YP_003864147.1| IS1294 transposase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|305696864|ref|YP_003864179.1| IS1294 transposase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|37962754|gb|AAR05701.1| IS1294 transposase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|189310881|gb|ACD87552.1| transposase [Escherichia coli] gi|229561772|gb|ACQ77973.1| IS1294 transposase [Escherichia coli] gi|241110727|gb|ACS66795.1| transposase [Escherichia coli] gi|254032060|gb|ACT54614.1| transposase [Klebsiella pneumoniae] gi|257757296|dbj|BAI28796.1| putative IS1294 transposase [Escherichia coli O26:H11 str. 11368] gi|300418181|gb|EFK01492.1| transposase [Escherichia coli MS 182-1] gi|304376134|dbj|BAJ15296.1| IS1294 transposase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|304376166|dbj|BAJ15328.1| IS1294 transposase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|324020974|gb|EGB90193.1| transposase [Escherichia coli MS 117-3] gi|327536444|gb|AEA95277.1| hypothetical protein pSD853_174_11 [Salmonella enterica subsp. enterica serovar Dublin] gi|327536470|gb|AEA95303.1| hypothetical protein pSD853_174_37 [Salmonella enterica subsp. enterica serovar Dublin] gi|327536680|gb|AEA95512.1| hypothetical protein pSD853_88_48 [Salmonella enterica subsp. enterica serovar Dublin] gi|327536719|gb|AEA95551.1| hypothetical protein pSD853_88_87 [Salmonella enterica subsp. enterica serovar Dublin] gi|327536801|gb|AEA95632.1| hypothetical protein pSD853_77_51 [Salmonella enterica subsp. enterica serovar Dublin] gi|327536811|gb|AEA95642.1| hypothetical protein pSD853_77_61 [Salmonella enterica subsp. enterica serovar Dublin] gi|327536848|gb|AEA95679.1| transposase [Salmonella enterica subsp. enterica serovar Dublin] gi|332144544|dbj|BAK19764.1| transposase [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 399 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 209 MPESLSHITTESQWRSLVLKSGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 266 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 267 AHYNG---GASLSFRYLDHKT 284 >gi|320352803|ref|YP_004194142.1| Holliday junction DNA helicase RuvA [Desulfobulbus propionicus DSM 2032] gi|320121305|gb|ADW16851.1| Holliday junction DNA helicase RuvA [Desulfobulbus propionicus DSM 2032] Length = 208 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 10/16 (62%) Query: 16 ILARIPGFGPRSARRA 31 L +PG G ++A+R Sbjct: 109 QLTALPGVGKKTAQRL 124 >gi|295107077|emb|CBL04620.1| Holliday junction DNA helicase subunit RuvA [Gordonibacter pamelaeae 7-10-1-b] Length = 199 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 12/18 (66%) Query: 18 ARIPGFGPRSARRATLHL 35 ++IPG G ++A R L L Sbjct: 111 SKIPGVGKKTASRIILEL 128 >gi|283769122|ref|ZP_06342027.1| Holliday junction DNA helicase RuvA [Bulleidia extructa W1219] gi|283104308|gb|EFC05686.1| Holliday junction DNA helicase RuvA [Bulleidia extructa W1219] Length = 192 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M +K I I L ++PG G +SA + L L Sbjct: 86 MLQKSGYALITEAISKGDVAALKKLPGIGAKSASQIVLDL 125 >gi|313650573|gb|EFS14976.1| transposase [Shigella flexneri 2a str. 2457T] Length = 398 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 13/55 (23%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLD------DGTIFE 193 T G+ TA Y+ LK + +RLA+ G G+ L YLD DGT+ + Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHETENGDGTLTQ 293 >gi|163855209|ref|YP_001629507.1| Holliday junction DNA helicase RuvA [Bordetella petrii DSM 12804] gi|229560006|sp|A9I8F2|RUVA_BORPD RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|163258937|emb|CAP41236.1| holliday junction DNA helicase [Bordetella petrii] Length = 190 Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 L R+PG G ++A R L++ + +L + + Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADIGATAHAV 143 >gi|329942438|ref|ZP_08291248.1| holliday junction DNA helicase RuvA [Chlamydophila psittaci Cal10] gi|332287079|ref|YP_004421980.1| holliday junction DNA helicase [Chlamydophila psittaci 6BC] gi|325507386|gb|ADZ19024.1| holliday junction DNA helicase [Chlamydophila psittaci 6BC] gi|328815348|gb|EGF85336.1| holliday junction DNA helicase RuvA [Chlamydophila psittaci Cal10] gi|328914313|gb|AEB55146.1| Holliday junction DNA helicase RuvA [Chlamydophila psittaci 6BC] Length = 207 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54 IK +A +PG G ++A + + L K+K L PL + + Sbjct: 108 IKAIASVPGIGKKTAEKLMVDL-KQKLADLLPLDSQITASW 147 >gi|297170981|gb|ADI21996.1| holliday junction resolvasome, DNA-binding subunit [uncultured myxobacterium HF0200_01L06] Length = 202 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 +K+L +PG GP+ A R + L LA A+ + Sbjct: 107 VKVLRGVPGIGPKMAERMVVEL----RDAASELAGALGSAGPSEGR 148 >gi|225374901|ref|ZP_03752122.1| hypothetical protein ROSEINA2194_00524 [Roseburia inulinivorans DSM 16841] gi|225213284|gb|EEG95638.1| hypothetical protein ROSEINA2194_00524 [Roseburia inulinivorans DSM 16841] Length = 203 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Query: 15 KILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEA 49 K +A+ PG G ++A+R L L + ++ LA+ Sbjct: 108 KAIAKAPGVGAKTAQRLILELKDKLSLEDAFEQKLAKN 145 >gi|238921830|ref|YP_002935344.1| hypothetical protein EUBELI_20063 [Eubacterium eligens ATCC 27750] gi|238873502|gb|ACR73210.1| Hypothetical protein EUBELI_20063 [Eubacterium eligens ATCC 27750] Length = 485 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 10/90 (11%) Query: 15 KILARIPGFGPRSARRATL--HLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPC 72 +L RIPG GP+SA+R + L + + + I N Sbjct: 396 DMLLRIPGVGPKSAKRIVQTRKYARLDFDTLKKMGVVLKRAHYF-----ITCNGKMMYKI 450 Query: 73 AICIDQQRDASVIIVVEDVADLWALERSKA 102 I + + ++ ++ + W ++ Sbjct: 451 PINENY---ITACLMGDNQKENWEIKHQNQ 477 >gi|227504981|ref|ZP_03935030.1| Holliday junction DNA helicase motor protein [Corynebacterium striatum ATCC 6940] gi|227198431|gb|EEI78479.1| Holliday junction DNA helicase motor protein [Corynebacterium striatum ATCC 6940] Length = 194 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 5/36 (13%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 + ++ I L IPG G R A R L L Sbjct: 84 MGPSQLAQAISSGDAKTLQTIPGVGKRMAERLALEL 119 >gi|95931133|ref|ZP_01313858.1| Holliday junction DNA helicase RuvA [Desulfuromonas acetoxidans DSM 684] gi|95132823|gb|EAT14497.1| Holliday junction DNA helicase RuvA [Desulfuromonas acetoxidans DSM 684] Length = 199 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPL 46 K LA +PG G ++A R L L + + L Sbjct: 107 KRLATLPGIGKKTADRLILEL----REKVRKL 134 >gi|293603639|ref|ZP_06686060.1| crossover junction ATP-dependent DNA helicase RuvA [Achromobacter piechaudii ATCC 43553] gi|292818075|gb|EFF77135.1| crossover junction ATP-dependent DNA helicase RuvA [Achromobacter piechaudii ATCC 43553] Length = 190 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Query: 17 LARIPGFGPRSARRATLHLVKKKEQLLGPL 46 L R+PG G ++A R L++ + +L + Sbjct: 110 LTRVPGIGKKTAERL---LLEMRGKLGADI 136 >gi|126725530|ref|ZP_01741372.1| Holliday junction DNA helicase motor protein [Rhodobacterales bacterium HTCC2150] gi|126704734|gb|EBA03825.1| Holliday junction DNA helicase motor protein [Rhodobacterales bacterium HTCC2150] Length = 221 Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 16 ILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANI 53 + PG GP+ A+R L L K K + L ++ Sbjct: 109 AIKAAPGVGPKIAQRVVLEL-KNKAPAIMALGGSLDEA 145 >gi|300856546|ref|YP_003781530.1| Holliday junction DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300436661|gb|ADK16428.1| Holliday junction DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 198 Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Query: 4 KITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAE 48 I ++ +NL++ PG G ++A+R L L K + +G L Sbjct: 101 AIISEDEKNLVRA----PGIGKKTAQRIILEL--KDKIDVGELTN 139 >gi|184154991|ref|YP_001843331.1| holliday junction DNA helicase RuvA [Lactobacillus fermentum IFO 3956] gi|227514529|ref|ZP_03944578.1| crossover junction endoribonuclease subunit A [Lactobacillus fermentum ATCC 14931] gi|260663386|ref|ZP_05864277.1| Holliday junction DNA helicase RuvA [Lactobacillus fermentum 28-3-CHN] gi|229560093|sp|B2GB19|RUVA_LACF3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|183226335|dbj|BAG26851.1| holliday junction DNA helicase RuvA [Lactobacillus fermentum IFO 3956] gi|227087086|gb|EEI22398.1| crossover junction endoribonuclease subunit A [Lactobacillus fermentum ATCC 14931] gi|260552238|gb|EEX25290.1| Holliday junction DNA helicase RuvA [Lactobacillus fermentum 28-3-CHN] Length = 200 Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 17 LARIPGFGPRSARRATLHL 35 L++ PG G ++A R + L Sbjct: 109 LSKFPGIGKKTASRIIIEL 127 >gi|238855252|ref|ZP_04645571.1| helicase, RecD/TraA family [Lactobacillus jensenii 269-3] gi|260664612|ref|ZP_05865464.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus jensenii SJ-7A-US] gi|282932455|ref|ZP_06337880.1| helicase, RecD/TraA family [Lactobacillus jensenii 208-1] gi|313471927|ref|ZP_07812419.1| helicase, RecD/TraA family [Lactobacillus jensenii 1153] gi|238832144|gb|EEQ24462.1| helicase, RecD/TraA family [Lactobacillus jensenii 269-3] gi|239529146|gb|EEQ68147.1| helicase, RecD/TraA family [Lactobacillus jensenii 1153] gi|260561677|gb|EEX27649.1| exodeoxyribonuclease V, alpha subunit [Lactobacillus jensenii SJ-7A-US] gi|281303404|gb|EFA95581.1| helicase, RecD/TraA family [Lactobacillus jensenii 208-1] Length = 790 Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 9/44 (20%) Query: 13 LIKILA--RIPGFGPRSARRA-------TLHLVKKKEQLLGPLA 47 L K L+ + PG G ++A+ L ++K+ L LA Sbjct: 86 LTKYLSGDKFPGIGRKTAQTIIDKLGLNALQVLKENPNKLEELA 129 >gi|237807578|ref|YP_002892018.1| DNA-directed DNA polymerase [Tolumonas auensis DSM 9187] gi|237499839|gb|ACQ92432.1| DNA-directed DNA polymerase [Tolumonas auensis DSM 9187] Length = 351 Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 11/17 (64%) Query: 16 ILARIPGFGPRSARRAT 32 L++IPG G ++A R Sbjct: 177 ALSKIPGIGGKTAERLV 193 >gi|260912903|ref|ZP_05919388.1| crossover junction endoribonuclease subunit A [Pasteurella dagmatis ATCC 43325] gi|260632893|gb|EEX51059.1| crossover junction endoribonuclease subunit A [Pasteurella dagmatis ATCC 43325] Length = 204 Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 4/24 (16%) Query: 8 KEIENLIKILARIPGFGPRSARRA 31 +E+ L+ +IPG G ++A R Sbjct: 105 EELSKLV----KIPGVGKKTAERL 124 >gi|76800945|ref|YP_325953.1| DNA mismatch repair protein MutS-like protein [Natronomonas pharaonis DSM 2160] gi|76556810|emb|CAI48384.1| DNA mismatch repair protein MutS homolog [Natronomonas pharaonis DSM 2160] Length = 667 Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 15 KILARIPGFGPRSARRAT 32 + L IPG G ++A R Sbjct: 4 EELEAIPGVGEKTAERLA 21 >gi|325954455|ref|YP_004238115.1| Holliday junction ATP-dependent DNA helicase ruvA [Weeksella virosa DSM 16922] gi|323437073|gb|ADX67537.1| Holliday junction ATP-dependent DNA helicase ruvA [Weeksella virosa DSM 16922] Length = 193 Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHL 35 M ++ KEI+ I K+L + G G ++A+R + L Sbjct: 88 MLSTLSPKEIQTAIYTEDAKLLQSVKGIGAKTAQRIIIDL 127 >gi|330830784|ref|YP_004393736.1| DNA polymerase IV [Aeromonas veronii B565] gi|328805920|gb|AEB51119.1| DNA polymerase IV [Aeromonas veronii B565] Length = 359 Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 10/15 (66%) Query: 17 LARIPGFGPRSARRA 31 L ++PG G ++A R Sbjct: 186 LGKLPGVGRKTAERL 200 >gi|291557374|emb|CBL34491.1| endonuclease III [Eubacterium siraeum V10Sc8a] Length = 212 Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 17/28 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M + G EI + I+ L ++PG G ++A Sbjct: 96 MLRDDFGGEIPDTIEQLVKLPGVGRKTA 123 >gi|319946374|ref|ZP_08020612.1| DNA helicase RecG [Streptococcus australis ATCC 700641] gi|319747527|gb|EFV99782.1| DNA helicase RecG [Streptococcus australis ATCC 700641] Length = 671 Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 12 NLIKILARIPGFGPRSARR 30 NL + L+ +PG GP+SA + Sbjct: 2 NLHQSLSVLPGIGPKSAEK 20 >gi|167750867|ref|ZP_02422994.1| hypothetical protein EUBSIR_01851 [Eubacterium siraeum DSM 15702] gi|167656046|gb|EDS00176.1| hypothetical protein EUBSIR_01851 [Eubacterium siraeum DSM 15702] Length = 212 Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 17/28 (60%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M + G EI + I+ L ++PG G ++A Sbjct: 96 MLRDDFGGEIPDTIEQLVKLPGVGRKTA 123 >gi|224418856|ref|ZP_03656862.1| Holliday junction DNA helicase RuvA [Helicobacter canadensis MIT 98-5491] gi|253828156|ref|ZP_04871041.1| Holliday junction DNA helicase motor protein [Helicobacter canadensis MIT 98-5491] gi|313142373|ref|ZP_07804566.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter canadensis MIT 98-5491] gi|253511562|gb|EES90221.1| Holliday junction DNA helicase motor protein [Helicobacter canadensis MIT 98-5491] gi|313131404|gb|EFR49021.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter canadensis MIT 98-5491] Length = 191 Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 13/18 (72%) Query: 14 IKILARIPGFGPRSARRA 31 IK + R+PG GP+SA R Sbjct: 108 IKSMQRVPGIGPKSAGRI 125 >gi|124002681|ref|ZP_01687533.1| holliday junction DNA helicase RuvA [Microscilla marina ATCC 23134] gi|123991909|gb|EAY31296.1| holliday junction DNA helicase RuvA [Microscilla marina ATCC 23134] Length = 194 Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 1 MQKKITGKEIENLI-----KILARIPGFGPRSARRATLHLVKKKEQLLGPLA 47 M ++ EI+ I K + I G G ++A+R L L K ++ +G +A Sbjct: 88 MLSSMSVSEIQTAIASEDVKAIKSIKGIGLKTAQRVILELKDKVQKEVGSIA 139 >gi|152966998|ref|YP_001362782.1| Holliday junction DNA helicase RuvA [Kineococcus radiotolerans SRS30216] gi|151361515|gb|ABS04518.1| Holliday junction DNA helicase RuvA [Kineococcus radiotolerans SRS30216] Length = 209 Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 17 LARIPGFGPRSARRATLHL 35 L R+PG G ++A+R L L Sbjct: 113 LVRVPGIGKKTAQRICLEL 131 >gi|196250113|ref|ZP_03148807.1| Holliday junction DNA helicase RuvA [Geobacillus sp. G11MC16] gi|196210297|gb|EDY05062.1| Holliday junction DNA helicase RuvA [Geobacillus sp. G11MC16] Length = 194 Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL 35 E+ I+ L + PG G ++AR+ L L Sbjct: 94 PDELARAIEEENEAFLCKFPGVGKKTARQMILDL 127 >gi|15674189|ref|NP_268364.1| Holliday junction DNA helicase motor protein [Lactococcus lactis subsp. lactis Il1403] gi|281492890|ref|YP_003354870.1| Holliday junction DNA helicase RuvA [Lactococcus lactis subsp. lactis KF147] gi|13878764|sp|Q9CDL2|RUVA_LACLA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|12725272|gb|AAK06305.1|AE006449_11 DNA helicase RuvA [Lactococcus lactis subsp. lactis Il1403] gi|281376542|gb|ADA66028.1| Holliday junction DNA helicase RuvA [Lactococcus lactis subsp. lactis KF147] Length = 197 Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L + PG G ++A + L L Sbjct: 106 IKYLTKFPGVGKKTAMQMVLDL 127 >gi|160871606|ref|ZP_02061738.1| holliday junction DNA helicase RuvA [Rickettsiella grylli] gi|159120405|gb|EDP45743.1| holliday junction DNA helicase RuvA [Rickettsiella grylli] Length = 199 Score = 35.6 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCL 59 + L +PG G ++A R +++ ++ L L+ I +K + Sbjct: 108 VNSLQAVPGIGKKTAERL---IIEMRD-RLRNLSHNQPEILDKNTI 149 >gi|313904087|ref|ZP_07837467.1| Holliday junction DNA helicase RuvA [Eubacterium cellulosolvens 6] gi|313471236|gb|EFR66558.1| Holliday junction DNA helicase RuvA [Eubacterium cellulosolvens 6] Length = 203 Score = 35.6 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Query: 16 ILARIPGFGPRSARRATLHL---VKKKEQLLGPLAEA 49 +A+ PG G ++A++A L L K + LA Sbjct: 109 AIAKAPGIGKKTAQKAVLELKDKFKLDDAFEKKLAHE 145 >gi|138896159|ref|YP_001126612.1| Holliday junction DNA helicase RuvA [Geobacillus thermodenitrificans NG80-2] gi|166230554|sp|A4IRB3|RUVA_GEOTN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|134267672|gb|ABO67867.1| Holliday junction DNA helicase RuvA [Geobacillus thermodenitrificans NG80-2] Length = 194 Score = 35.6 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Query: 7 GKEIENLIKI-----LARIPGFGPRSARRATLHL 35 E+ I+ L + PG G ++AR+ L L Sbjct: 94 PDELARAIEEENEAFLCKFPGVGKKTARQMILDL 127 >gi|125625244|ref|YP_001033727.1| Holliday junction DNA helicase motor protein [Lactococcus lactis subsp. cremoris MG1363] gi|166230561|sp|A2RP07|RUVA_LACLM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|124494052|emb|CAL99052.1| holliday junction DNA helicase ruvA [Lactococcus lactis subsp. cremoris MG1363] gi|300072054|gb|ADJ61454.1| Holliday junction DNA helicase RuvA [Lactococcus lactis subsp. cremoris NZ9000] Length = 197 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L + PG G ++A + L L Sbjct: 106 IKYLTKFPGVGKKTAMQMVLDL 127 >gi|153214499|ref|ZP_01949408.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115301|gb|EAY34121.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|327484969|gb|AEA79376.1| 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae LMA3894-4] Length = 194 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI + +P A+R L+L E PL E + Sbjct: 29 QQLIHTFSSLPEVTA--AQRIALYLANDGELNTQPLIEWL 66 >gi|254226257|ref|ZP_04919850.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125621230|gb|EAZ49571.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 194 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 + LI + +P A+R L+L E PL E + Sbjct: 29 QQLIHTFSSLPEVTA--AQRIALYLANDGELNTQPLIEWL 66 >gi|116513152|ref|YP_812059.1| Holliday junction DNA helicase motor protein [Lactococcus lactis subsp. cremoris SK11] gi|123025083|sp|Q02VS6|RUVA_LACLS RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|116108806|gb|ABJ73946.1| Holliday junction DNA helicase subunit RuvA [Lactococcus lactis subsp. cremoris SK11] Length = 197 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 IK L + PG G ++A + L L Sbjct: 106 IKYLTKFPGVGKKTAMQMVLDL 127 >gi|295107016|emb|CBL04559.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III [Gordonibacter pamelaeae 7-10-1-b] Length = 220 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 6 TGKEIENLIKILARIPGFGPRSA 28 G EI I L ++PG G ++A Sbjct: 108 YGGEIPRDIDELQKLPGVGRKTA 130 >gi|325474386|gb|EGC77574.1| Holliday junction ATP-dependent DNA helicase ruvA [Treponema denticola F0402] Length = 201 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 5/32 (15%) Query: 9 EIENLIKI-----LARIPGFGPRSARRATLHL 35 +E ++ L + PG G ++A++ L L Sbjct: 97 SLEKALEEGDLDTLQKAPGVGKKTAQKMILAL 128 >gi|237752874|ref|ZP_04583354.1| holliday junction DNA helicase motor protein [Helicobacter winghamensis ATCC BAA-430] gi|229375141|gb|EEO25232.1| holliday junction DNA helicase motor protein [Helicobacter winghamensis ATCC BAA-430] Length = 193 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 13/18 (72%) Query: 14 IKILARIPGFGPRSARRA 31 IK + R+PG GP+SA R Sbjct: 108 IKSMQRVPGIGPKSAGRI 125 >gi|242310193|ref|ZP_04809348.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter pullorum MIT 98-5489] gi|239523490|gb|EEQ63356.1| holliday junction ATP-dependent DNA helicase ruvA [Helicobacter pullorum MIT 98-5489] Length = 192 Score = 35.6 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 13/18 (72%) Query: 14 IKILARIPGFGPRSARRA 31 IK + R+PG GP+SA R Sbjct: 108 IKSMQRVPGIGPKSAGRI 125 >gi|327536861|gb|AEA95692.1| hypothetical protein pSD853_77_111 [Salmonella enterica subsp. enterica serovar Dublin] Length = 287 Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 97 MPESLSHITTESQWRSLVLKSGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 154 Query: 174 AY--GIPMGSELD--YLDDGT 190 A+ G G+ L YLD T Sbjct: 155 AHYNG---GASLSFRYLDHKT 172 >gi|257125212|ref|YP_003163326.1| endonuclease III [Leptotrichia buccalis C-1013-b] gi|257049151|gb|ACV38335.1| endonuclease III [Leptotrichia buccalis C-1013-b] Length = 219 Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 4/26 (15%) Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28 K I K++E LI+ +PG G ++A Sbjct: 102 KDIIPKKLEELIE----LPGVGRKTA 123 >gi|282600689|ref|ZP_05979453.2| radical SAM domain protein [Subdoligranulum variabile DSM 15176] gi|282571389|gb|EFB76924.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176] Length = 470 Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 11/17 (64%) Query: 16 ILARIPGFGPRSARRAT 32 L R+PG GP+SA R Sbjct: 349 ELLRVPGIGPKSATRIV 365 >gi|242780797|ref|XP_002479670.1| HhH-GPD family base excision DNA repair protein [Talaromyces stipitatus ATCC 10500] gi|218719817|gb|EED19236.1| HhH-GPD family base excision DNA repair protein [Talaromyces stipitatus ATCC 10500] Length = 407 Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 11 ENLIKILARIPGFGPRSARRATLHLVKKK 39 E + L + PG GP++A L +++ Sbjct: 315 EEAMLELIKFPGIGPKTAACVVLFCLQRP 343 >gi|221108687|ref|XP_002164124.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 529 Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 12/80 (15%) Query: 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGN 65 + + LIK L+ +P G SA + + + + CS CGN Sbjct: 410 SSNVFQQLIKTLSSVPMGGSPSA--IA---------AITQSINGLQSA-DFTECCSCCGN 457 Query: 66 VDTTDPCAICIDQQRDASVI 85 + + C+ C + Sbjct: 458 RRSFNKCSSCKMVKYCNQSC 477 >gi|261402931|ref|YP_003247155.1| small GTP-binding protein [Methanocaldococcus vulcanius M7] gi|261369924|gb|ACX72673.1| small GTP-binding protein [Methanocaldococcus vulcanius M7] Length = 411 Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 37 KKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 + E+L ++ + ++ C CG T C C Sbjct: 38 RHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNC 76 >gi|42543686|pdb|1S0U|A Chain A, Eif2gamma Apo Length = 408 Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 37 KKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 + E+L ++ + ++ C CG T C C Sbjct: 35 RHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNC 73 >gi|15602332|ref|NP_245404.1| DNA polymerase IV [Pasteurella multocida subsp. multocida str. Pm70] gi|22095635|sp|Q9CNG4|DPO4_PASMU RecName: Full=DNA polymerase IV; Short=Pol IV gi|12720724|gb|AAK02551.1| DinP [Pasteurella multocida subsp. multocida str. Pm70] Length = 355 Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 5 ITGKEIENLIKIL--ARIPGFGPRSARRA 31 I ++IE+ I L +IPG G +A+R Sbjct: 164 IKPEQIEHFIANLPLKKIPGVGKVTAQRL 192 >gi|289192153|ref|YP_003458094.1| small GTP-binding protein [Methanocaldococcus sp. FS406-22] gi|288938603|gb|ADC69358.1| small GTP-binding protein [Methanocaldococcus sp. FS406-22] Length = 411 Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 37 KKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 + E+L ++ + ++ C CG T C C Sbjct: 38 RHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNC 76 >gi|68067871|sp|Q58657|IF2G_METJA RecName: Full=Translation initiation factor 2 subunit gamma; AltName: Full=aIF2-gamma; AltName: Full=eIF-2-gamma Length = 411 Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 37 KKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 + E+L ++ + ++ C CG T C C Sbjct: 38 RHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNC 76 >gi|330815560|ref|YP_004359265.1| Holliday junction resolvasome, DNA-binding subunit [Burkholderia gladioli BSR3] gi|327367953|gb|AEA59309.1| Holliday junction resolvasome, DNA-binding subunit [Burkholderia gladioli BSR3] Length = 193 Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 18/31 (58%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ ++ + L R+PG G ++A R Sbjct: 93 MSVQELSQVVTLQDSARLTRLPGIGKKTAER 123 >gi|288818057|ref|YP_003432405.1| endonuclease III [Hydrogenobacter thermophilus TK-6] gi|288787457|dbj|BAI69204.1| endonuclease III [Hydrogenobacter thermophilus TK-6] gi|308751658|gb|ADO45141.1| endonuclease III [Hydrogenobacter thermophilus TK-6] Length = 209 Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLH 34 M + G E+ I+ L R+PG G ++A L+ Sbjct: 95 MIIEDYGGEVPKSIEELTRLPGVGRKTAN-MILY 127 >gi|327403822|ref|YP_004344660.1| Holliday junction DNA helicase subunit RuvA [Fluviicola taffensis DSM 16823] gi|327319330|gb|AEA43822.1| Holliday junction DNA helicase subunit RuvA [Fluviicola taffensis DSM 16823] Length = 192 Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 1 MQKKITGKEIENLIK-----ILARIPGFGPRSARRATLHL 35 M ++ EI N I+ + I G G ++A+R + L Sbjct: 88 MLSSMSPSEIANAIQTEDVRSIQAIKGIGAKTAQRVIIDL 127 >gi|20093633|ref|NP_613480.1| EndoIII-related endonuclease [Methanopyrus kandleri AV19] gi|19886502|gb|AAM01410.1| Predicted EndoIII-related endonuclease [Methanopyrus kandleri AV19] Length = 233 Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 16/26 (61%) Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28 ++I K E + L R+PG GP++A Sbjct: 120 EEIVQKPTEEARRELMRLPGVGPKTA 145 >gi|332664106|ref|YP_004446894.1| UvrABC system protein C [Haliscomenobacter hydrossis DSM 1100] gi|332332920|gb|AEE50021.1| UvrABC system protein C [Haliscomenobacter hydrossis DSM 1100] Length = 602 Score = 35.6 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 12 NLIK-ILARIPGFGPRSARRATLH---LVKKKEQLLGPLAEAMANIYNKVCL 59 N I L IPG G ++A++ H + K +E L L E + KV Sbjct: 543 NFIDTELNNIPGIGEKTAQKLLTHFGSVRKIREALASELIEVLGMAKAKVVK 594 >gi|224541319|ref|ZP_03681858.1| hypothetical protein CATMIT_00479 [Catenibacterium mitsuokai DSM 15897] gi|224525756|gb|EEF94861.1| hypothetical protein CATMIT_00479 [Catenibacterium mitsuokai DSM 15897] Length = 204 Score = 35.6 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 9/47 (19%) Query: 9 EIENLIKI--------LARIPGFGPRSARRATLHL-VKKKEQLLGPL 46 EI+ +I L +IPG GP++A++ L L K ++ + PL Sbjct: 109 EIDAIIDAIEGKNIAYLKKIPGIGPKAAQQIILDLHGKFDKRAMKPL 155 >gi|167629941|ref|YP_001680440.1| transposase, is116/is110/is902 family, putative [Heliobacterium modesticaldum Ice1] gi|167592681|gb|ABZ84429.1| transposase, is116/is110/is902 family, putative [Heliobacterium modesticaldum Ice1] Length = 338 Score = 35.6 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 4/26 (15%) Query: 11 ENLIKILARIPGFGPRSARRATLHLV 36 E LI++L IPG G R+A HL+ Sbjct: 175 EELIQLLDTIPGVGRRTAE----HLL 196 >gi|78065251|ref|YP_368020.1| Holliday junction DNA helicase motor protein [Burkholderia sp. 383] gi|90134649|sp|Q39JJ0|RUVA_BURS3 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|77965996|gb|ABB07376.1| DNA recombination protein, RuvA [Burkholderia sp. 383] Length = 193 Score = 35.6 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|302338526|ref|YP_003803732.1| Holliday junction DNA helicase RuvA [Spirochaeta smaragdinae DSM 11293] gi|301635711|gb|ADK81138.1| Holliday junction DNA helicase RuvA [Spirochaeta smaragdinae DSM 11293] Length = 202 Score = 35.6 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 14 IKILARIPGFGPRSARRATLHL 35 + +L+ IPG G +SA + L L Sbjct: 107 VDLLSSIPGVGKKSAGKIILAL 128 >gi|134294766|ref|YP_001118501.1| Holliday junction DNA helicase RuvA [Burkholderia vietnamiensis G4] gi|166230530|sp|A4JBL3|RUVA_BURVG RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|134137923|gb|ABO53666.1| Holliday junction DNA helicase RuvA [Burkholderia vietnamiensis G4] Length = 193 Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|161501897|ref|YP_219549.2| Holliday junction DNA helicase motor protein [Chlamydophila abortus S26/3] gi|90134722|sp|Q5L6Z3|RUVA_CHLAB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA Length = 207 Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54 IK +A +PG G ++A + + L K+K L PL + + Sbjct: 108 IKAIASVPGIGKKTAEKLMVDL-KQKLADLLPLDAQILASW 147 >gi|313673192|ref|YP_004051303.1| holliday junction DNA helicase ruva [Calditerrivibrio nitroreducens DSM 19672] gi|312939948|gb|ADR19140.1| Holliday junction DNA helicase RuvA [Calditerrivibrio nitroreducens DSM 19672] Length = 192 Score = 35.2 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 IKILARIPGFGPRSARRATLHL 35 I ++A PG G ++A R L L Sbjct: 107 INLIATAPGVGKKTAERIILEL 128 >gi|258512078|ref|YP_003185512.1| Holliday junction DNA helicase RuvA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478804|gb|ACV59123.1| Holliday junction DNA helicase RuvA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 208 Score = 35.2 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 + L+R+PG G + A R + L Sbjct: 107 ESLSRLPGIGRKLASRLVVEL 127 >gi|15669447|ref|NP_248257.1| translation initiation factor IF-2 subunit gamma [Methanocaldococcus jannaschii DSM 2661] gi|1591895|gb|AAB99264.1| translation initiation factor aIF-2, subunit gamma (aif2G) [Methanocaldococcus jannaschii DSM 2661] Length = 437 Score = 35.2 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 37 KKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 + E+L ++ + ++ C CG T C C Sbjct: 64 RHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNC 102 >gi|85859218|ref|YP_461420.1| SMF family protein involved in DNA uptake [Syntrophus aciditrophicus SB] gi|85722309|gb|ABC77252.1| SMF family protein involved in DNA uptake [Syntrophus aciditrophicus SB] Length = 394 Score = 35.2 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 15 KILARIPGFGPRSARRA-TLH 34 + L +PG GP++A R H Sbjct: 42 QDLMSVPGIGPKTASRIKAFH 62 >gi|238026246|ref|YP_002910477.1| Holliday junction DNA helicase RuvA [Burkholderia glumae BGR1] gi|237875440|gb|ACR27773.1| Holliday junction resolvasome, DNA-binding subunit [Burkholderia glumae BGR1] Length = 193 Score = 35.2 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 10/14 (71%) Query: 17 LARIPGFGPRSARR 30 L R+PG G ++A R Sbjct: 110 LQRLPGIGKKTAER 123 >gi|167586148|ref|ZP_02378536.1| Holliday junction DNA helicase motor protein [Burkholderia ubonensis Bu] Length = 193 Score = 35.2 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|150400428|ref|YP_001324195.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii SB] gi|150013131|gb|ABR55583.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii SB] Length = 356 Score = 35.2 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28 +K K I N I L ++PG G ++A Sbjct: 107 EKYNSK-IPNSIDELVKLPGVGRKTA 131 >gi|87308915|ref|ZP_01091053.1| probable holliday junction DNA helicase ruvA [Blastopirellula marina DSM 3645] gi|87288258|gb|EAQ80154.1| probable holliday junction DNA helicase ruvA [Blastopirellula marina DSM 3645] Length = 208 Score = 35.2 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 14/54 (25%) Query: 8 KEIENLIKI-----LARIPGFGPRSARRAT---------LHLVKKKEQLLGPLA 47 +E+ +LI+ L+ +PG GP +A R L+ + +L +A Sbjct: 102 QEVASLIEEQDTKGLSALPGVGPATADRIVAKLRRKVPKFALLVGRSELGEDIA 155 >gi|115350636|ref|YP_772475.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria AMMD] gi|122324004|sp|Q0BI82|RUVA_BURCM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|115280624|gb|ABI86141.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria AMMD] Length = 193 Score = 35.2 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|62147831|emb|CAH63577.1| putative holliday junction DNA helicase RuvA [Chlamydophila abortus S26/3] Length = 222 Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 14 IKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIY 54 IK +A +PG G ++A + + L K+K L PL + + Sbjct: 123 IKAIASVPGIGKKTAEKLMVDL-KQKLADLLPLDAQILASW 162 >gi|325528762|gb|EGD05824.1| Holliday junction DNA helicase RuvA [Burkholderia sp. TJI49] Length = 193 Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 10/14 (71%) Query: 17 LARIPGFGPRSARR 30 L R+PG G ++A R Sbjct: 110 LTRLPGIGKKTAER 123 >gi|323342039|ref|ZP_08082272.1| crossover junction ATP-dependent DNA helicase RuvA [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464464|gb|EFY09657.1| crossover junction ATP-dependent DNA helicase RuvA [Erysipelothrix rhusiopathiae ATCC 19414] Length = 195 Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 3 KKITGKEIENLIKI-----LARIPGFGPRSARRATLHL 35 + +G +I I L ++PG GP+ A + L L Sbjct: 88 SRFSGDDIVRAIDQEDMAFLKKLPGVGPKMASQMMLDL 125 >gi|168204868|ref|ZP_02630873.1| holliday junction DNA helicase RuvA [Clostridium perfringens E str. JGS1987] gi|170663669|gb|EDT16352.1| holliday junction DNA helicase RuvA [Clostridium perfringens E str. JGS1987] Length = 201 Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K + R PG G ++A+R L L Sbjct: 108 KHITRAPGIGKKTAQRIILEL 128 >gi|156975809|ref|YP_001446716.1| hypothetical protein VIBHAR_03554 [Vibrio harveyi ATCC BAA-1116] gi|156527403|gb|ABU72489.1| hypothetical protein VIBHAR_03554 [Vibrio harveyi ATCC BAA-1116] Length = 197 Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Query: 12 NLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAM 50 +LI +++P ++A+ ++L E PL E++ Sbjct: 31 DLIHQFSQLPEI--KTAQHIAIYLSADGELDTKPLIESL 67 >gi|170699606|ref|ZP_02890645.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria IOP40-10] gi|171319639|ref|ZP_02908733.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria MEX-5] gi|172059669|ref|YP_001807321.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria MC40-6] gi|229560008|sp|B1YTE0|RUVA_BURA4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|170135488|gb|EDT03777.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria IOP40-10] gi|171095130|gb|EDT40136.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria MEX-5] gi|171992186|gb|ACB63105.1| Holliday junction DNA helicase RuvA [Burkholderia ambifaria MC40-6] Length = 193 Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|289548067|ref|YP_003473055.1| hypothetical protein Thal_0293 [Thermocrinis albus DSM 14484] gi|289181684|gb|ADC88928.1| protein of unknown function DUF224 cysteine-rich region domain protein [Thermocrinis albus DSM 14484] Length = 427 Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 24/92 (26%), Gaps = 2/92 (2%) Query: 51 ANIYNKVCLCSICGNVDTTDPC--AICIDQQRDASVIIVVEDVADLWALERSKAVNALYH 108 C C T P A+ R + + LE Y Sbjct: 29 EEARRVYSKCKDCRMCVTYCPSFPALFDAVDRHDDDVSKLSKEELALPLELCFHCKQCYF 88 Query: 109 VLGGSLSPLDRIGPEDIGIQSLIERIEVKKIR 140 + RI + ++ + + + K+ + Sbjct: 89 KCPYTPPHEWRIDFPHLSLRYKVWKFKNKRAK 120 >gi|169824416|ref|YP_001692027.1| endonuclease III [Finegoldia magna ATCC 29328] gi|302380577|ref|ZP_07269042.1| endonuclease III [Finegoldia magna ACS-171-V-Col3] gi|167831221|dbj|BAG08137.1| endonuclease III [Finegoldia magna ATCC 29328] gi|302311520|gb|EFK93536.1| endonuclease III [Finegoldia magna ACS-171-V-Col3] Length = 208 Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 11/15 (73%) Query: 14 IKILARIPGFGPRSA 28 I+ L ++PG G ++A Sbjct: 108 IEELMKLPGVGRKTA 122 >gi|18310930|ref|NP_562864.1| Holliday junction DNA helicase motor protein [Clostridium perfringens str. 13] gi|168208649|ref|ZP_02634274.1| holliday junction DNA helicase RuvA [Clostridium perfringens B str. ATCC 3626] gi|168214131|ref|ZP_02639756.1| holliday junction DNA helicase RuvA [Clostridium perfringens CPE str. F4969] gi|168215574|ref|ZP_02641199.1| holliday junction DNA helicase RuvA [Clostridium perfringens NCTC 8239] gi|169343575|ref|ZP_02864574.1| holliday junction DNA helicase RuvA [Clostridium perfringens C str. JGS1495] gi|20455244|sp|Q8XJ13|RUVA_CLOPE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|18145612|dbj|BAB81654.1| holliday junction DNA helicase [Clostridium perfringens str. 13] gi|169298135|gb|EDS80225.1| holliday junction DNA helicase RuvA [Clostridium perfringens C str. JGS1495] gi|170713198|gb|EDT25380.1| holliday junction DNA helicase RuvA [Clostridium perfringens B str. ATCC 3626] gi|170714360|gb|EDT26542.1| holliday junction DNA helicase RuvA [Clostridium perfringens CPE str. F4969] gi|182381996|gb|EDT79475.1| holliday junction DNA helicase RuvA [Clostridium perfringens NCTC 8239] Length = 201 Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K + R PG G ++A+R L L Sbjct: 108 KHITRAPGIGKKTAQRIILEL 128 >gi|303233806|ref|ZP_07320460.1| endonuclease III [Finegoldia magna BVS033A4] gi|302495240|gb|EFL54992.1| endonuclease III [Finegoldia magna BVS033A4] Length = 208 Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 11/15 (73%) Query: 14 IKILARIPGFGPRSA 28 I+ L ++PG G ++A Sbjct: 108 IEELMKLPGVGRKTA 122 >gi|296108859|ref|YP_003615808.1| small GTP-binding protein [Methanocaldococcus infernus ME] gi|295433673|gb|ADG12844.1| small GTP-binding protein [Methanocaldococcus infernus ME] Length = 417 Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 37 KKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAIC 75 + E+L ++ + ++ C CG T C C Sbjct: 44 RHSEELRRGISIRLGYADCEIRKCPSCGTYTTKPRCPNC 82 >gi|182624414|ref|ZP_02952198.1| holliday junction DNA helicase RuvA [Clostridium perfringens D str. JGS1721] gi|177910417|gb|EDT72794.1| holliday junction DNA helicase RuvA [Clostridium perfringens D str. JGS1721] Length = 201 Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K + R PG G ++A+R L L Sbjct: 108 KHITRAPGIGKKTAQRIILEL 128 >gi|110800505|ref|YP_696628.1| Holliday junction DNA helicase RuvA [Clostridium perfringens ATCC 13124] gi|123148615|sp|Q0TP12|RUVA_CLOP1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|110675152|gb|ABG84139.1| Holliday junction DNA helicase RuvA [Clostridium perfringens ATCC 13124] Length = 201 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K + R PG G ++A+R L L Sbjct: 108 KHITRAPGIGKKTAQRIILEL 128 >gi|333019491|gb|EGK38773.1| transposase [Shigella flexneri K-227] Length = 402 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|333017470|gb|EGK36784.1| transposase [Shigella flexneri K-227] Length = 312 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|332084630|gb|EGI89822.1| transposase [Shigella dysenteriae 155-74] Length = 402 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|281603809|gb|ADA76792.1| IS1294 transposase [Shigella flexneri 2002017] Length = 402 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|13449015|ref|NP_085231.1| IS1294 transposase [Shigella flexneri 5a] gi|13310563|gb|AAK18387.1|AF348706_76 IS1294 transposase [Shigella flexneri 5a] Length = 399 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|24112944|ref|NP_707454.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|110805540|ref|YP_689060.1| IS1294 orf [Shigella flexneri 5 str. 8401] gi|24051897|gb|AAN43161.1| IS1294 ORF [Shigella flexneri 2a str. 301] gi|110615088|gb|ABF03755.1| IS1294 ORF [Shigella flexneri 5 str. 8401] Length = 306 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|82779080|ref|YP_405429.1| IS1294 orf [Shigella dysenteriae Sd197] gi|81243228|gb|ABB63938.1| IS1294 ORF [Shigella dysenteriae Sd197] Length = 402 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|13449111|ref|NP_085327.1| IS1294 orf [Shigella flexneri 5a] gi|13310659|gb|AAK18483.1|AF348706_172 IS1294 orf [Shigella flexneri 5a] gi|58045128|gb|AAW64898.1| IS1294 ORF [Shigella flexneri] Length = 399 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|13449003|ref|NP_085219.1| IS1294 orf [Shigella flexneri 5a] gi|13449033|ref|NP_085249.1| IS1294 orf, fragment [Shigella flexneri 5a] gi|13310551|gb|AAK18375.1|AF348706_64 IS1294 orf [Shigella flexneri 5a] gi|13310581|gb|AAK18405.1|AF348706_94 IS1294 orf, fragment [Shigella flexneri 5a] gi|58045111|gb|AAW64881.1| IS1294 ORF [Shigella flexneri] gi|58045138|gb|AAW64908.1| IS1294 ORF [Shigella flexneri] Length = 402 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|31983674|ref|NP_858194.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|18462666|gb|AAL72438.1| IS1294 ORF [Shigella flexneri 2a str. 301] Length = 402 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|31983676|ref|NP_858225.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|18462668|gb|AAL72440.1| IS1294 ORF [Shigella flexneri 2a str. 301] Length = 309 Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|333017700|gb|EGK37011.1| transposase [Shigella flexneri K-227] Length = 402 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|320180790|gb|EFW55714.1| IS1294 transposase [Shigella boydii ATCC 9905] Length = 402 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|24113178|ref|NP_707688.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|31983673|ref|NP_858176.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|110805766|ref|YP_689286.1| IS1294 orf [Shigella flexneri 5 str. 8401] gi|18462665|gb|AAL72437.1| IS1294 ORF [Shigella flexneri 2a str. 301] gi|24052168|gb|AAN43395.1| IS1294 ORF [Shigella flexneri 2a str. 301] gi|110615314|gb|ABF03981.1| IS1294 ORF [Shigella flexneri 5 str. 8401] Length = 399 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|13448986|ref|NP_085202.1| IS1294 orf [Shigella flexneri 5a] gi|13310534|gb|AAK18358.1|AF348706_47 IS1294 orf [Shigella flexneri 5a] gi|58045030|gb|AAW64800.1| IS1294 ORF [Shigella flexneri] Length = 399 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|13449220|ref|NP_085436.1| IS1294 orf [Shigella flexneri 5a] gi|13310768|gb|AAK18592.1|AF348706_281 IS1294 orf [Shigella flexneri 5a] gi|58045040|gb|AAW64810.1| IS1294 ORF [Shigella flexneri] Length = 398 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|31983675|ref|NP_858205.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|18462667|gb|AAL72439.1| IS1294 ORF [Shigella flexneri 2a str. 301] Length = 399 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|37526153|ref|NP_929497.1| hypothetical protein plu2240 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785583|emb|CAE14533.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 430 Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 134 IEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYG 176 ++ ++ + ++EG+ T YI +K + + TRLA G Sbjct: 207 LKNYYKNSMVLGVETSVEGRLTGVYISNKGQKQKLSCTRLACG 249 >gi|304439856|ref|ZP_07399750.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371595|gb|EFM25207.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] Length = 210 Score = 35.2 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M G E+ N I+ L ++PG G ++A Sbjct: 98 MIIDEYGGEVPNTIEELVKLPGVGKKTA 125 >gi|206561676|ref|YP_002232441.1| Holliday junction DNA helicase RuvA [Burkholderia cenocepacia J2315] gi|229560010|sp|B4EES6|RUVA_BURCJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|198037718|emb|CAR53661.1| holliday junction DNA helicase [Burkholderia cenocepacia J2315] Length = 193 Score = 35.2 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|31983677|ref|NP_858395.1| IS1294 transposase [Shigella flexneri 2a str. 301] gi|18462669|gb|AAL72441.1| IS1294 ORF [Shigella flexneri 2a str. 301] Length = 398 Score = 35.2 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|188573994|ref|YP_001919309.1| transposase [Escherichia coli 53638] gi|188501169|gb|ACD54304.1| transposase [Escherichia coli 53638] Length = 402 Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L+ YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLNFRYLDHKT 287 >gi|254253224|ref|ZP_04946542.1| DNA recombination protein [Burkholderia dolosa AUO158] gi|124895833|gb|EAY69713.1| DNA recombination protein [Burkholderia dolosa AUO158] Length = 164 Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 64 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 94 >gi|262171932|ref|ZP_06039610.1| hypothetical protein VII_002757 [Vibrio mimicus MB-451] gi|261893008|gb|EEY38994.1| hypothetical protein VII_002757 [Vibrio mimicus MB-451] Length = 37 Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Query: 6 TGKEIENLIKILARIPGFGPR-SA 28 T +E+L++ L +PG GP+ SA Sbjct: 3 TSHMLEHLMEALRCLPGVGPKISA 26 >gi|107021766|ref|YP_620093.1| Holliday junction DNA helicase RuvA [Burkholderia cenocepacia AU 1054] gi|116688712|ref|YP_834335.1| Holliday junction DNA helicase motor protein [Burkholderia cenocepacia HI2424] gi|161525864|ref|YP_001580876.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans ATCC 17616] gi|170732009|ref|YP_001763956.1| Holliday junction DNA helicase RuvA [Burkholderia cenocepacia MC0-3] gi|189349415|ref|YP_001945043.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans ATCC 17616] gi|221202296|ref|ZP_03575330.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans CGD2M] gi|221209110|ref|ZP_03582104.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans CGD2] gi|221214501|ref|ZP_03587472.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans CGD1] gi|123371880|sp|Q1BZ35|RUVA_BURCA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230524|sp|A0K4L5|RUVA_BURCH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560009|sp|B1JVV4|RUVA_BURCC RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560011|sp|A9AH72|RUVA_BURM1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|105891955|gb|ABF75120.1| Holliday junction DNA helicase RuvA [Burkholderia cenocepacia AU 1054] gi|116646801|gb|ABK07442.1| Holliday junction DNA helicase RuvA [Burkholderia cenocepacia HI2424] gi|160343293|gb|ABX16379.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans ATCC 17616] gi|169815251|gb|ACA89834.1| Holliday junction DNA helicase RuvA [Burkholderia cenocepacia MC0-3] gi|189333437|dbj|BAG42507.1| holliday junction DNA helicase [Burkholderia multivorans ATCC 17616] gi|221165758|gb|EED98233.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans CGD1] gi|221171014|gb|EEE03467.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans CGD2] gi|221177870|gb|EEE10283.1| Holliday junction DNA helicase RuvA [Burkholderia multivorans CGD2M] Length = 193 Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 93 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 123 >gi|325971233|ref|YP_004247424.1| Holliday junction ATP-dependent DNA helicase ruvA [Spirochaeta sp. Buddy] gi|324026471|gb|ADY13230.1| Holliday junction ATP-dependent DNA helicase ruvA [Spirochaeta sp. Buddy] Length = 210 Score = 35.2 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 15 KILARIPGFGPRSARRATLHL 35 K+L+ IPG GP++ ++ L L Sbjct: 112 KLLSSIPGIGPKTGQKMILAL 132 >gi|82779269|ref|YP_405618.1| IS1294 orf [Shigella dysenteriae Sd197] gi|81243417|gb|ABB64127.1| IS1294 ORF [Shigella dysenteriae Sd197] Length = 402 Score = 35.2 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 245 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 287 >gi|333017432|gb|EGK36748.1| transposase [Shigella flexneri K-227] Length = 399 Score = 35.2 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|194431147|ref|ZP_03063440.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194431190|ref|ZP_03063483.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194431350|ref|ZP_03063643.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194420602|gb|EDX36678.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194420645|gb|EDX36721.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194420805|gb|EDX36881.1| IS1294, transposase [Shigella dysenteriae 1012] Length = 360 Score = 35.2 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 203 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 245 >gi|194431414|ref|ZP_03063706.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194431480|ref|ZP_03063772.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194420239|gb|EDX36316.1| IS1294, transposase [Shigella dysenteriae 1012] gi|194420305|gb|EDX36382.1| IS1294, transposase [Shigella dysenteriae 1012] Length = 360 Score = 35.2 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 203 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 245 >gi|299144525|ref|ZP_07037604.1| endonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517613|gb|EFI41353.1| endonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 214 Score = 34.8 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 4/32 (12%) Query: 1 MQKKITGKEIE----NLIKILARIPGFGPRSA 28 M K +E + I+ L +PG G ++A Sbjct: 95 MTSKKIVEEFDGQVPKTIEELMSLPGVGKKTA 126 >gi|254246308|ref|ZP_04939629.1| DNA recombination protein, RuvA [Burkholderia cenocepacia PC184] gi|124871084|gb|EAY62800.1| DNA recombination protein, RuvA [Burkholderia cenocepacia PC184] Length = 164 Score = 34.8 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ +E+ + + L R+PG G ++A R Sbjct: 64 MSVQELAQAVTMQDAARLTRLPGIGKKTAER 94 >gi|320177773|gb|EFW52759.1| Transposase [Shigella boydii ATCC 9905] Length = 399 Score = 34.8 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|322807372|emb|CBZ04946.1| holliday junction DNA helicase RuvA [Clostridium botulinum H04402 065] Length = 197 Score = 34.8 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K + R PG G ++A+R L L Sbjct: 108 KTITRAPGIGKKTAQRIILEL 128 >gi|320180301|gb|EFW55234.1| Transposase [Shigella boydii ATCC 9905] Length = 399 Score = 34.8 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 242 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 284 >gi|150401058|ref|YP_001324824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus Nankai-3] gi|150013761|gb|ABR56212.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus Nankai-3] Length = 357 Score = 34.8 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%) Query: 1 MQKKITGKEIENLIKILARIPGFGPRSA 28 M K +I N I L ++PG G ++A Sbjct: 102 MVKNNYNGKIPNDINELVKLPGVGRKTA 129 >gi|148381022|ref|YP_001255563.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A str. ATCC 3502] gi|153931785|ref|YP_001385393.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A str. ATCC 19397] gi|153936604|ref|YP_001388800.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A str. Hall] gi|166230541|sp|A7FY20|RUVA_CLOB1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|166230542|sp|A5I6F2|RUVA_CLOBH RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|148290506|emb|CAL84634.1| holliday junction DNA helicase [Clostridium botulinum A str. ATCC 3502] gi|152927829|gb|ABS33329.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A str. ATCC 19397] gi|152932518|gb|ABS38017.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A str. Hall] Length = 197 Score = 34.8 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 8/37 (21%) Query: 15 KILARIPGFGPRSARRATLHL--------VKKKEQLL 43 K + R PG G ++A+R L L +++ ++ + Sbjct: 108 KTITRAPGIGKKTAQRIILELKDKIEIDILEEDDEQI 144 >gi|153938510|ref|YP_001392349.1| Holliday junction DNA helicase RuvA [Clostridium botulinum F str. Langeland] gi|168179565|ref|ZP_02614229.1| holliday junction DNA helicase RuvA [Clostridium botulinum NCTC 2916] gi|170754638|ref|YP_001782706.1| Holliday junction DNA helicase RuvA [Clostridium botulinum B1 str. Okra] gi|226950500|ref|YP_002805591.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A2 str. Kyoto] gi|166230543|sp|A7GHT9|RUVA_CLOBL RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|229560023|sp|B1IMF4|RUVA_CLOBK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|254766953|sp|C1FKG2|RUVA_CLOBJ RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|152934406|gb|ABS39904.1| Holliday junction DNA helicase RuvA [Clostridium botulinum F str. Langeland] gi|169119850|gb|ACA43686.1| Holliday junction DNA helicase RuvA [Clostridium botulinum B1 str. Okra] gi|182669614|gb|EDT81590.1| holliday junction DNA helicase RuvA [Clostridium botulinum NCTC 2916] gi|226841819|gb|ACO84485.1| Holliday junction DNA helicase RuvA [Clostridium botulinum A2 str. Kyoto] gi|295320341|gb|ADG00719.1| Holliday junction DNA helicase RuvA [Clostridium botulinum F str. 230613] Length = 197 Score = 34.8 bits (79), Expect = 6.3, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 8/37 (21%) Query: 15 KILARIPGFGPRSARRATLHL--------VKKKEQLL 43 K + R PG G ++A+R L L +++ ++ + Sbjct: 108 KTITRAPGIGKKTAQRIILELKDKIEIDILEEDDEQI 144 >gi|333019052|gb|EGK38343.1| transposase [Shigella flexneri K-227] Length = 151 Score = 34.8 bits (79), Expect = 6.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 81 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 123 >gi|207111381|ref|ZP_03245543.1| recombination protein RecR [Helicobacter pylori HPKX_438_CA4C1] Length = 52 Score = 34.8 bits (79), Expect = 6.6, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 74 ICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGG 112 +C D+ R S + +V D++ LE K Y+VL Sbjct: 1 MCSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNS 39 >gi|82524738|ref|YP_406299.1| IS1294 transposase [Shigella boydii Sb227] gi|81248240|gb|ABB68947.1| IS1294 ORF [Shigella boydii Sb227] Length = 310 Score = 34.8 bits (79), Expect = 6.6, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 114 LSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRL 173 + + +SL+ + K ++ T G+ TA Y+ LK + +RL Sbjct: 212 MPESLSHITTESQWRSLVLKAGGKYWH--VYMSKKTAGGRNTARYLGRYLKKPPIAASRL 269 Query: 174 AY 175 A+ Sbjct: 270 AH 271 >gi|260891368|ref|ZP_05902631.1| endonuclease III [Leptotrichia hofstadii F0254] gi|260858751|gb|EEX73251.1| endonuclease III [Leptotrichia hofstadii F0254] Length = 219 Score = 34.8 bits (79), Expect = 6.9, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Query: 3 KKITGKEIENLIKILARIPGFGPRSA 28 + K++E L++ +PG G ++A Sbjct: 102 NDVIPKDLEKLVE----LPGVGRKTA 123 >gi|255291934|dbj|BAH90422.1| Holliday junction DNA helicase RuvA [uncultured bacterium] Length = 190 Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ E+ + L ++PG G ++A R Sbjct: 93 MSAAELAQAVSAQESGRLTKVPGIGKKTAER 123 >gi|168181761|ref|ZP_02616425.1| Holliday junction DNA helicase RuvA [Clostridium botulinum Bf] gi|237796527|ref|YP_002864079.1| Holliday junction DNA helicase RuvA [Clostridium botulinum Ba4 str. 657] gi|259495636|sp|C3KTD3|RUVA_CLOB6 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|182675197|gb|EDT87158.1| Holliday junction DNA helicase RuvA [Clostridium botulinum Bf] gi|229263209|gb|ACQ54242.1| Holliday junction DNA helicase RuvA [Clostridium botulinum Ba4 str. 657] Length = 197 Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 15 KILARIPGFGPRSARRATLHL 35 K + R PG G ++A+R L L Sbjct: 108 KTITRAPGIGKKTAQRIILEL 128 >gi|194437988|ref|ZP_03070082.1| ISPsy3, transposase [Escherichia coli 101-1] gi|194423209|gb|EDX39202.1| ISPsy3, transposase [Escherichia coli 101-1] Length = 203 Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 46 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 88 >gi|291524757|emb|CBK90344.1| Holliday junction DNA helicase subunit RuvA [Eubacterium rectale DSM 17629] gi|291528922|emb|CBK94508.1| Holliday junction DNA helicase subunit RuvA [Eubacterium rectale M104/1] Length = 205 Score = 34.5 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 K +++ PG G ++A+R L L K K L + + N Sbjct: 111 KAISKAPGIGAKTAQRVILDL-KDKLSLEDAFEKKLEN 147 >gi|238924017|ref|YP_002937533.1| Holliday junction resolvasome, DNA-binding subunit [Eubacterium rectale ATCC 33656] gi|238875692|gb|ACR75399.1| Holliday junction resolvasome, DNA-binding subunit [Eubacterium rectale ATCC 33656] Length = 205 Score = 34.5 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMAN 52 K +++ PG G ++A+R L L K K L + + N Sbjct: 111 KAISKAPGIGAKTAQRVILDL-KDKLSLEDAFEKKLEN 147 >gi|323974486|gb|EGB69613.1| hypothetical protein ERFG_04664 [Escherichia coli TW10509] Length = 191 Score = 34.5 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 34 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 76 >gi|320182724|gb|EFW57609.1| Transposase [Shigella boydii ATCC 9905] Length = 236 Score = 34.5 bits (78), Expect = 8.1, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 79 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 121 >gi|226698801|sp|A4G1U8|RUVA_HERAR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvA gi|193222212|emb|CAL60485.2| Holliday junction DNA helicase ruvA [Herminiimonas arsenicoxydans] Length = 192 Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ ++ N I + L +IPG G ++A R Sbjct: 93 MSVADLSNAITLQEAGRLTKIPGIGKKTAER 123 >gi|134093539|ref|YP_001098614.1| Holliday junction DNA helicase ruvA [Herminiimonas arsenicoxydans] Length = 161 Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 5/31 (16%) Query: 5 ITGKEIENLIKI-----LARIPGFGPRSARR 30 ++ ++ N I + L +IPG G ++A R Sbjct: 62 MSVADLSNAITLQEAGRLTKIPGIGKKTAER 92 >gi|323171471|gb|EFZ57118.1| transposase for insertion sequence element IS801 domain protein [Escherichia coli LT-68] Length = 70 Score = 34.5 bits (78), Expect = 8.7, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 149 TIEGQTTAHYIMDKLKGIDVKITRLAY--GIPMGSELD--YLDDGT 190 T G+ TA Y+ LK + +RLA+ G G+ L YLD T Sbjct: 5 TAGGRNTARYLGRYLKKPPIAASRLAHYNG---GASLSFRYLDHKT 47 >gi|126665164|ref|ZP_01736147.1| glutamyl-tRNA reductase [Marinobacter sp. ELB17] gi|126630534|gb|EBA01149.1| glutamyl-tRNA reductase [Marinobacter sp. ELB17] Length = 434 Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 22/166 (13%) Query: 45 PLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVN 104 + + + Y CG+ +R + + E+ + A N Sbjct: 119 QILGQLKDAYALAREHKACGSFLARLFEHTFSVAKRVRTQTAIGENPVSV-AYAAVSMAN 177 Query: 105 ALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIE-GQTTAHY----- 158 ++ + + + L G L+ R + + T+E QT A Sbjct: 178 RIFADMSRNKALLIGAGKTI----ELVARHLADAGVKDFLVANRTLERAQTLAQVHGGKG 233 Query: 159 -----IMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 I + L +D+ I+ A +P+ GT+ A++ R Sbjct: 234 ILLSDIAEHLHEVDIIISSTASPLPVLG------KGTVERALKKRK 273 >gi|84490347|ref|YP_448579.1| DNA-binding protein [Methanosphaera stadtmanae DSM 3091] gi|84373666|gb|ABC57936.1| predicted DNA-binding protein [Methanosphaera stadtmanae DSM 3091] Length = 375 Score = 34.5 bits (78), Expect = 9.7, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 15 KILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSI 62 K L ++PG G +SARR T ++K + + L + + + + C I Sbjct: 318 KELIKVPGIGLKSARRITH--LQKIGRKINNL-KQLQELGVNINQCKI 362 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.311 0.154 0.492 Lambda K H 0.267 0.0475 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,345,036,064 Number of Sequences: 14124377 Number of extensions: 118658946 Number of successful extensions: 343705 Number of sequences better than 10.0: 2808 Number of HSP's better than 10.0 without gapping: 2465 Number of HSP's successfully gapped in prelim test: 343 Number of HSP's that attempted gapping in prelim test: 340062 Number of HSP's gapped (non-prelim): 2920 length of query: 201 length of database: 4,842,793,630 effective HSP length: 132 effective length of query: 69 effective length of database: 2,978,375,866 effective search space: 205507934754 effective search space used: 205507934754 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 78 (34.4 bits)