HHsearch alignment of GI: 254780763 and MMDB domain: 1ybx_A_
>1ybx_A (A:) Conserved hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=99.94 E-value=5e-26 Score=186.72 Aligned_cols=103 Identities=34% Similarity=0.519 Sum_probs=101.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 92179999999999999999999985308999976984999996483074688647882910068999999999999999
Q gi|254780763|r 1 MSNIMKMVGQFKEIQGKMEKMKESITSLEAEGNAGGGMVSVRINGKNMLTGVKIDRSLLFEDNVEILEDLIIAAHSDAHK 80 (107)
Q Consensus 1 M~nm~~llkqaq~mq~~m~~~q~eL~~~~v~g~sg~g~V~V~~~G~~~i~~i~Id~~~l~~~d~e~Ledli~~A~N~A~~ 80 (107)
+.|+.+|++++|++|++++++|++|+..+|+++|++|+|+||++|+++|++|+|||++++++|++.|+++|++|||+|.+
T Consensus 40 ~~dl~~mlk~aq~~q~~l~~~q~eL~~~~~~g~S~~GlV~Vtv~G~g~v~~I~Idp~~l~~~d~e~L~~lI~~Ain~A~~ 119 (143)
T 1ybx_A 40 GGNINNLVKQAQKXQRDXERVQEELKEKTVEASAGGGAVTVVATGRKDIKEITIKPEVVDPDDVEXLQDLILAAVNEALR 119 (143)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHCEEEEEETTTTEEEEEETTCCEEEEEECGGGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 74799999999999999999999984569999978986999997790589998688984965699999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999999974489989999
Q gi|254780763|r 81 KIEDLVATKTQEITEGLPIPPGL 103 (107)
Q Consensus 81 k~~~~~~~~m~~~tggl~lp~g~ 103 (107)
++++..+++|.++||||++||||
T Consensus 120 ~a~~~~~e~m~~l~g~l~lppGm 142 (143)
T 1ybx_A 120 KADEXVTAEISKITGGLGGIPGL 142 (143)
T ss_dssp HHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999986799999988