HHsearch results for GI: 254780763 and protein with PDBid: 1j8b_A

>1j8b_A YBAB; hypothetical protein, structural genomics, structure 2 function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae rd KW20} SCOP: d.222.1.1 PDB: 1pug_A
Probab=100.00  E-value=7.3e-33  Score=229.13  Aligned_cols=106  Identities=42%  Similarity=0.734  Sum_probs=103.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             92179999999999999999999985308999976984999996483074688647882910068999999999999999
Q gi|254780763|r    1 MSNIMKMVGQFKEIQGKMEKMKESITSLEAEGNAGGGMVSVRINGKNMLTGVKIDRSLLFEDNVEILEDLIIAAHSDAHK   80 (107)
Q Consensus         1 M~nm~~llkqaq~mq~~m~~~q~eL~~~~v~g~sg~g~V~V~~~G~~~i~~i~Id~~~l~~~d~e~Ledli~~A~N~A~~   80 (107)
                      |+||++||+|||+||++++++|++|++++|+|+|++|+|+||+||+++|++|+|||++++ +|+++|+|+|++|||+|++
T Consensus         7 ~~nm~~mlkqaq~mq~~~~~~q~eL~~~~v~~~s~~g~V~V~~~G~~~v~~i~Id~~~l~-~d~e~LedlI~~A~N~A~~   85 (112)
T 1j8b_A            7 KGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLME-DDKEMLEDLIAAAFNDAVR   85 (112)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHTTSEEEEEEGGGTEEEEEETTCCEEEEEECGGGGG-SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEEEEEECHHHHC-CCHHHHHHHHHHHHHHHHH
T ss_conf             778999999999999999999999856299999879769999976947999998888841-7899999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             999999999999744899899999998
Q gi|254780763|r   81 KIEDLVATKTQEITEGLPIPPGLKFPF  107 (107)
Q Consensus        81 k~~~~~~~~m~~~tggl~lp~g~~lPf  107 (107)
                      ++++.++++|+++|||+++||||+|||
T Consensus        86 ka~~~~~~~m~~ltggl~lppg~~~p~  112 (112)
T 1j8b_A           86 RAEELQKEKMASVTAGMPLPPGMKFPF  112 (112)
T ss_dssp             HHHHHHHHHHHHHTCC-----------
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             999999999999857999998999997