HHSEARCH alignment of GI: 254780763 and SCOP domain: d1j8ba_

Alignment

Probab=99.93  E-value=9e-26  Score=182.63  Aligned_cols=92  Identities=40%  Similarity=0.621  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             79999999999999999999985308999976984999996483074688647882910068999999999999999999
Q gi|254780763|r    4 IMKMVGQFKEIQGKMEKMKESITSLEAEGNAGGGMVSVRINGKNMLTGVKIDRSLLFEDNVEILEDLIIAAHSDAHKKIE   83 (107)
Q Consensus         4 m~~llkqaq~mq~~m~~~q~eL~~~~v~g~sg~g~V~V~~~G~~~i~~i~Id~~~l~~~d~e~Ledli~~A~N~A~~k~~   83 (107)
                      |++||+|||+||++|+++|++|++.+|+|+||+|+|+|++||+++|++|+|||++++ +|+++|||||++|||+|+++++
T Consensus         1 m~~mmkqaq~mq~~m~~~q~eL~~~~v~~~sg~g~V~V~~~G~~~v~~i~Id~~~l~-~d~e~LedlI~~A~N~A~~k~~   79 (92)
T d1j8ba_           1 LGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLME-DDKEMLEDLIAAAFNDAVRRAE   79 (92)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTSEEEEEEGGGTEEEEEETTCCEEEEEECGGGGG-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCEEEEEEECCEEEEEEEECHHHHC-CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             968999999999999999999747299999879879999988867999998878702-7599999999999999999999


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999999997448
Q gi|254780763|r   84 DLVATKTQEITEG   96 (107)
Q Consensus        84 ~~~~~~m~~~tgg   96 (107)
                      +.++++|+++|||
T Consensus        80 ~~~~~~m~~~tGG   92 (92)
T d1j8ba_          80 ELQKEKMASVTAG   92 (92)
T ss_dssp             HHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHCCC
T ss_conf             9999998755399

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: YbaB-like
superfamily: YbaB-like
family: YbaB-like
domain: Hypothetical protein HI0442
species: Haemophilus influenzae [TaxId: 727]