HHsearch results for GI: 254780764 and protein with PDBid: 1m9s_A
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1
Probab=96.41 E-value=0.012 Score=33.66 Aligned_cols=86 Identities=20% Similarity=0.308 Sum_probs=57.6
Q ss_pred CEEEEEECCCEEEEEECCCCCCCCCCCCCCCC-----CCCCCCCCEEEECCC-CC-CCCEEEEEC--CCCEEEEEEE---
Q ss_conf 12567532530576402334654433333433-----343443311333179-98-775379973--8988999952---
Q gi|254780764|r 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN-----RKTNNPIYINLYKKP-DI-QSIIVAKVE--PGVLLTIREC--- 163 (194)
Q Consensus 96 ~W~kV~~~~g~~Gwv~~~~ls~~~~~~~~~~~-----~~~~~~~~lnvR~~P-s~-~s~iv~~l~--~g~~v~i~~~--- 163 (194)
.|+.+++ .||+...-+....+..+.... ....++..-.+++.| .+ .++.++.+. .|..+++.+.
T Consensus 414 ~wy~~k~----~GW~~~~~~~~~~~d~i~~~~~~t~ya~~~~~~~~~iyt~py~t~g~~~~~~~~~y~~~~~~i~~~~~t 489 (605)
T 1m9s_A 414 LWYRLKN----IGWTKAENLSLDRYDKMEYDKGVTAYARVRNASGNSVWTKPYNTAGAKHVNKLSVYQGKNMRILREAKT 489 (605)
T ss_dssp CEEEBTT----SCEEETTTSCSSCCCCCSCCCCCCEEEEESCCTTCEEBSSSSSSTTCCCEEEGGGGCSSCEEECCCEEC
T ss_pred EEEEECC----CCEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCEEEEEEEEEC
T ss_conf 3798313----560664655543220343046640266760278860685115677846624654325726999760042
Q ss_pred -ECCEEEEEECCEE-EEEECCCEE
Q ss_conf -0998999989989-999714122
Q gi|254780764|r 164 -SGEWCFGYNLDTE-GWIKKQKIW 185 (194)
Q Consensus 164 -~~~W~kV~~~g~~-GWV~k~~iw 185 (194)
.+.||+++.+|+. ||+.+..+.
T Consensus 490 ~~~~~y~f~~~~k~iGW~d~~a~~ 513 (605)
T 1m9s_A 490 PITTWYQFSIGGKVIGWVDTRALN 513 (605)
T ss_dssp SSCEEEEEEETTEEEEEEETTTEE
T ss_pred CCCCEEEEEECCEEEEEEECCCCE
T ss_conf 676589999799287546545530